BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 007640
         (595 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/575 (60%), Positives = 428/575 (74%), Gaps = 15/575 (2%)

Query: 23  RRSNSIDFC---GHKSEAAANGVGLPMTLLFFTVRPSRVRASTIAAIAHFHGLANGGSRP 79
           R +N+I  C    H+++   +GV L MTLL F  RPSRVRAS IA IA FH  A G SR 
Sbjct: 8   RGANNISLCLLCAHQTQPC-DGVALQMTLLLFITRPSRVRASKIA-IAQFHEHAVGISRN 65

Query: 80  FDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLG 139
             E   N     E W VKV+CTL +R+  L D C  Y  + L+P  + EV++ L+NP+L 
Sbjct: 66  RPEVIQN----PENWIVKVICTLCVRTHSL-DACLDYFSKTLTPSIAFEVVRGLNNPELA 120

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           LKF + SRVNL+L HSF+TY+ ++RSL EMG H+S + V+D M  DGH P++ ++ F VS
Sbjct: 121 LKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVS 180

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           S   AGK + A+  +       V  S  +YN LLN LV+ N  DEAV  F+E   L+   
Sbjct: 181 SATDAGKFNIARTWVDG-----VEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPF 235

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D+ +FNILI+GL RIG+V KAFE F +M  FGCSPD++TYNTLI+G CRVNEV RGH+LL
Sbjct: 236 DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLL 295

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           KE+  K++ SPDVVTYTS+ISGYCKLGKM+KA+ ++N M S GIKP+A TFN+LI+GFGK
Sbjct: 296 KELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGK 355

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           VG+MVSAE M E ML  G  PD++TF+SLIDG+CR G++ + LKL  E+  +NLSPN YT
Sbjct: 356 VGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYT 415

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F IL NALCKENRL++AR FL+ LKW  +V +PFMYNPVIDGFCKAGNVDEANVI+AEME
Sbjct: 416 FAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEME 475

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           EKRCKPDK+T+TILIIGHCMKGR+ EAISIFN+ML  GCAPD IT+ SLISCLLK GMPN
Sbjct: 476 EKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPN 535

Query: 560 EAFRIMQRASEDQNLQLPSWKKAVPLRTNTDIPVA 594
           EA+RIMQ ASED NL L S K+ VPLRTNTDIPVA
Sbjct: 536 EAYRIMQIASEDFNLGLKSLKRNVPLRTNTDIPVA 570


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/552 (61%), Positives = 422/552 (76%), Gaps = 7/552 (1%)

Query: 46  MTLLFFTVRPSRVRASTIAAIAHFHGLANGGSR--PFDEKEVNYRCSNEFWFVKVVCTLL 103
           MTLLFF+ R  R+R S  + IA F+ LA+  SR  PF ++E+     +E W VKVVCTL 
Sbjct: 1   MTLLFFSSRAYRLRTSNFS-IAQFYSLADSVSRARPFCDREIIRH--SEAWLVKVVCTLF 57

Query: 104 LRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVM 163
            RS  L + C  YL   L+P  + EVIKR  +P LGLKF EFSR +LS+NH+F TY+L+M
Sbjct: 58  FRSHSL-NACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLM 116

Query: 164 RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           R+LC++GL+DS ++VFD MRSDG LP+S ++E  VSS  R GK D+AK  L++     + 
Sbjct: 117 RNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIK 176

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           +S F+YN+LLN LVKQN  DEAV +F+E+   Y  PD ++FNILI+GL RIGE+ KAFEF
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEF 236

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
           F +MG+FGC PDIV+YNTLI+G CRVNE+++GH+LLKE       SPDV+TYTS+ISGYC
Sbjct: 237 FQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYC 296

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           KLG M  A+ +++EM S GIKP+  TFNVLIDGFGKVGNM SA  M E+ML  G LPDVV
Sbjct: 297 KLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVV 356

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           TF+SLIDGYCR G++NQGLKL +EMK +NLSPNVYT+ +LINALCKENR+ +AR FL+ L
Sbjct: 357 TFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           K +++VPKPF+YNPVIDGFCKAG VDEAN IVAEM+EK+C+PDK+TFTILIIG+CMKGRM
Sbjct: 417 KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
           VEAIS F KM+ I C PD+IT+NSLISCLLK GMPNEA +I Q A +  NL L S    +
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPL 536

Query: 584 PLRTNTDIPVAA 595
             R ++ +PVA 
Sbjct: 537 T-RKSSRVPVAV 547


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/547 (60%), Positives = 407/547 (74%), Gaps = 37/547 (6%)

Query: 49  LFFTVRPSRVRASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSY 108
           LF    P RVRASTIA IA FHG   GGSR + +++                        
Sbjct: 3   LFSLTGPFRVRASTIA-IARFHGQTQGGSRFYPDRQ------------------------ 37

Query: 109 LSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
                       L+PL + EVIKR +NPK+G KFLEFSR+NL++NH + TYNL+MRSLC+
Sbjct: 38  ------------LTPLIAFEVIKRFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQ 85

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           MG HD V +VFDYM SDGHLP+S ++ F V+   +A   D  K LL++ +  EV +++F+
Sbjct: 86  MGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFV 145

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN+LL+ LVKQN   EA+Y+FKEY  + S PDTWTFNILI+GL R+G V +AFE F DM 
Sbjct: 146 YNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDME 205

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           SFGC PD+VTYNTLI+GLC+ NEV RG EL KE++ +S+ SPD+VTYTS+ISG+CK GKM
Sbjct: 206 SFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKM 265

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A+ ++ EM   GI+P+ +TFNVLIDGFGK+GN+  AE M  +M  F    DVVTF+SL
Sbjct: 266 KEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSL 325

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDGYCR GQ+N GLK  + MK +N+SP VYT+ +LINALCKENRLN+AR FL Q+K + +
Sbjct: 326 IDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSI 385

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +PKPFMYNPVIDGFCKAGNVDE NVI+ EMEEKRC PDKVTFTILIIGHC+KGRM EAI+
Sbjct: 386 IPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAIN 445

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTN 588
           IFN+ML   CAPD+ITVNSLISCLLK GMPNEA+RI + A ED+NL L S++KA+PLRTN
Sbjct: 446 IFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLSSFEKAIPLRTN 505

Query: 589 TDIPVAA 595
           TDIPVA 
Sbjct: 506 TDIPVAV 512


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/552 (60%), Positives = 421/552 (76%), Gaps = 7/552 (1%)

Query: 46  MTLLFFTVRPSRVRASTIAAIAHFHGLANGGSR--PFDEKEVNYRCSNEFWFVKVVCTLL 103
           MTLLFF+ R  R+R S  + IA F+ LA+  SR  PF ++E+     +E W VKVVCTL 
Sbjct: 1   MTLLFFSSRAYRLRTSNFS-IAQFYSLADSVSRARPFCDREIIRH--SEAWLVKVVCTLF 57

Query: 104 LRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVM 163
            RS  L + C  YL   L+P  + EVIKR  +P LGLKF EFSR +LS+NH+F TY+L+M
Sbjct: 58  FRSHSL-NACFGYLSRNLNPSIAFEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLM 116

Query: 164 RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           R+LC++GL+DS ++VFD MRSDG LP+S ++E  VSS  R GK D+AK  L++     + 
Sbjct: 117 RNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIK 176

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           +S F+YN+LLN LVKQN  DEAV +F+E+   Y  PD ++FNILI+GL RIGE+ KAFEF
Sbjct: 177 VSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEF 236

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
           F +MG+FGC PDIV+YNTLI+G CRVNE+++GH+LLKE       SPDV+TYTS+ISGYC
Sbjct: 237 FQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYC 296

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           KLG M  A+ +++EM S GIKP+  TFNVLIDGFGKVGNM SA  M E+ML  G LPDVV
Sbjct: 297 KLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVV 356

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           TF+SLIDGYCR G++NQGLKL +EMK +NLSPNVYT+ +LINALCKENR+ +AR FL+ L
Sbjct: 357 TFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           K +++VPKPF+YNPVIDGFCKAG VDEAN IVAEM+EK+C+PDK+TFTILIIG+CMKGRM
Sbjct: 417 KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
           VEAIS F KM+ I C PD+IT+NSLISCLLK GMPNEA +I Q A +  NL L S    +
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSSLGSPL 536

Query: 584 PLRTNTDIPVAA 595
             R ++ +P A 
Sbjct: 537 T-RKSSRVPAAV 547


>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 532

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/533 (60%), Positives = 413/533 (77%), Gaps = 4/533 (0%)

Query: 66  IAHFHGLANGGS-RPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLS-P 123
           +AHFH    GG   PF +KEV  + + E WFVKV+  L +RS     T   YL EKL+ P
Sbjct: 1   MAHFHDYTKGGGFHPFSDKEVIVK-NQEAWFVKVIAILFVRSHCSDATSLGYLSEKLNDP 59

Query: 124 LNSLEVIKRLDN-PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM 182
           L + EVIKRL+N P++GLKF+EF R+N SL H F TY L++RSLC+MGLHD V++V  YM
Sbjct: 60  LVAFEVIKRLNNNPQVGLKFMEFCRLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYM 119

Query: 183 RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
           RSDGHL +S ++ F V+S  +AGK D AK L+ + +  E  +S+F+YN LLN LVK    
Sbjct: 120 RSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKV 179

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            EA+++FKE    +S P+TWTFNILI+GL R+GEV+K FE F  M SFGC PD+VTYNTL
Sbjct: 180 HEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTL 239

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ISGLC+ NE+ R  +LLKEV+ +++ SPDV+TYTS+ISG+ KLGK++ A+ ++ EM   G
Sbjct: 240 ISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSG 299

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I+P+ VTFNVLIDGFGK+GNMV+AE M E+M S+  +PDVVTF+SLIDGYCR G +  GL
Sbjct: 300 IEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGL 359

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           K+ D MK +N+SPN+YT++++INALCK+NR+++AR  L+QLK +D+ PKPF+YNPVIDGF
Sbjct: 360 KVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGF 419

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CKAGNVDEANVIV EMEEKRC+PDKVTFTILIIGHCMKGRMVEA+ IF KML IGCAPD+
Sbjct: 420 CKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDN 479

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNTDIPVAA 595
           IT++SL++CLLK G P+EAF I+Q ASED NL   S +K  P+R  TDI VAA
Sbjct: 480 ITISSLVACLLKAGKPSEAFHIVQTASEDLNLSFSSLRKTFPMRVKTDISVAA 532


>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
 gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
 gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 287/535 (53%), Positives = 367/535 (68%), Gaps = 11/535 (2%)

Query: 58  VRASTIAAIAHFHGLANGGS--RPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCAR 115
           +R +   AIAHFH  ++GG+  RP            E W VK+V TL +     SD C  
Sbjct: 2   IRTTFATAIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFC 61

Query: 116 YLCEKLSPLNSLEVIKRLD-NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           YL + L+P  S EV+K+LD NP +G +F EFSR  L++ HSF TYNL+ RSLC+ GLHD 
Sbjct: 62  YLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDL 121

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
              +F+ M+SDG  PN+ ++ F VSS    GK   A  LL Q    EV     + NSLLN
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ--SFEVEGCCMVVNSLLN 179

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            LVK +  ++A+ +F E+ R  S  DT TFNILI+GL  +G+ +KA E    M  FGC P
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           DIVTYNTLI G C+ NE+ +  E+ K+VK  S  SPDVVTYTS+ISGYCK GKM +A+ +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            ++M   GI P+ VTFNVL+DG+ K G M++AE +R +M+SFG  PDVVTF+SLIDGYCR
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            GQ++QG +L +EM  + + PN +T++ILINALC ENRL  AR  L QL   D++P+PFM
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YNPVIDGFCKAG V+EANVIV EME+K+CKPDK+TFTILIIGHCMKGRM EA+SIF+KM+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNT 589
            IGC+PD ITV+SL+SCLLK GM  EA+ + Q A + Q+         VPL T T
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQS------NNVVPLETKT 528


>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 285/530 (53%), Positives = 365/530 (68%), Gaps = 7/530 (1%)

Query: 58  VRASTIAAIAHFHGLANGGS--RPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCAR 115
           +R +   AIAHFH  ++GG+  RP            E W VK+V TL +     SD C  
Sbjct: 2   IRTTFATAIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFC 61

Query: 116 YLCEKLSPLNSLEVIKRLD-NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           YL + L+P  S EV+K+LD NP +G +F EFSR  L++ HSF TYNL+ RSLC+ GLHD 
Sbjct: 62  YLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDL 121

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
              +F+ M+SDG  PN+ ++ F VSS    GK   A  LL Q    EV     + NSLLN
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ--SFEVEGCCMVVNSLLN 179

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            LVK +  ++A+ +F E+ R  S  DT TFNILI+GL  +G+ +KA E    M  FGC P
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           DIVTYNTLI G C+ NE+ +  E+ K+VK  S  SPDVVTYTS+ISGYCK GKM +A+ +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            ++M   GI P+ VTFNVL+DG+ K G M++AE +R +M+SFG  PDVVTF+SLIDGYCR
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            GQ++QG +L +EM  + + PN +T++ILINALC ENRL  AR  L QL   D++P+PFM
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YNPVIDGFCKAG V+EANVIV EME+K+CKPDK+TFTILIIGHCMKGRM EA+SIF+KM+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ--RASEDQNLQLPSWKKA 582
            IGC+PD ITV+SL+SCLLK GM  EA+ + Q  R  +  N+  P  K A
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPPETKTA 529


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 288/542 (53%), Positives = 370/542 (68%), Gaps = 12/542 (2%)

Query: 58  VRASTIAAIAHFHGLANGGS--RPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCAR 115
           +R +   AIAHFH  ++GG+  RP            E W VK+V TL +     SD C  
Sbjct: 2   IRTTFATAIAHFHTHSHGGAQARPIQNNTREKIHCPEAWLVKIVSTLFVYRVPDSDLCFC 61

Query: 116 YLCEKLSPLNSLEVIKRLD-NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           YL + L+P  S EV+K+LD NP +G +F EFSR  L++ HSF TYNL+ RSLC+ G+HD 
Sbjct: 62  YLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDL 121

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
              +F+ M+SDG  PNS ++ F VSS    GK   A  LL Q    EV     + NSLLN
Sbjct: 122 AGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQ--SYEVEGCCMVVNSLLN 179

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            LVK +  ++A+ +F+E+ R  S  DT TFNILI+GL  +G+ +KA E    M  FGC P
Sbjct: 180 TLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLP 239

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           DIVTYNTLI G C+ NE+ + +E+  +VK  S  SPDVVTYTS+ISGYCK GKM +A+ +
Sbjct: 240 DIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVL 299

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            ++M   GI P+ VTFNVL+DG+ K G M +AE +R +M+SFG  PDVVTF+SLIDGYCR
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            GQ+NQG +L +EM  + + PN +T++ILINALCKENRL  AR  L QL   D++P+PFM
Sbjct: 360 VGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFM 419

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YNPVIDGFCKAG V+EA VIV EME+K+CKPDK+TFTILIIGHCMKGRM EA+SIF+KM+
Sbjct: 420 YNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNT-DIPV 593
            IGC+PD ITV+SL+SCLLK GM  EA+ + Q A + Q           PL T T ++ +
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHKGQ------INDGAPLETKTANVTL 533

Query: 594 AA 595
           AA
Sbjct: 534 AA 535


>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 544

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 288/556 (51%), Positives = 378/556 (67%), Gaps = 22/556 (3%)

Query: 41  GVGLPMTLLFFT-VRPSRVRASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVV 99
           GV   MT  FFT +R S  R  T  A A   GL                 + + WFVK+V
Sbjct: 7   GVEKLMTFSFFTAIRASHYRTLT-QATASDKGLI--------------ITTPDSWFVKIV 51

Query: 100 CTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY 159
            TL L S+ L D    Y  E L+P + LEV+KR +NP LG KF  F+R  LS++HSF TY
Sbjct: 52  STLFLCSNSLDDRFLGYFREHLTPSHVLEVVKRFNNPNLGFKFFRFTRERLSMSHSFWTY 111

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N+++RSLC+ GLH+S ++++D MRSDG LP+S ++ F VSS   A + D +K LL++ + 
Sbjct: 112 NMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEAQC 171

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             V +   +YN+ LN L+K N  D+A+ +F+E  R +S  D +TFNILI+GL   G+V +
Sbjct: 172 SGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDE 231

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           AFE   DMGSFGCSPDIVTYN L+ GLCR+++V R  +LL+EV  K EF+P+VV+YT+VI
Sbjct: 232 AFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVI 291

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           SGYC+L KMD+A+ ++ EM   G KP+  TF+ L+DGF K G+M SA  M +++L  G  
Sbjct: 292 SGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCA 351

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+V+T +SLI+GYCR G +N GL L  EM  +N+  N+YT+++LI+ALCK NRL +AR  
Sbjct: 352 PNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNL 411

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L+ LK +D+VP  F+YNPVIDG+CK+GN+DEAN IVAEMEEK CKPDK+TFTILIIGHCM
Sbjct: 412 LRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEK-CKPDKLTFTILIIGHCM 470

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           KGR  EAI IF KML  GC PDDIT+ +L SCLLK GMP EA RI +   E+Q   L   
Sbjct: 471 KGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIKETLFENQESIL--- 527

Query: 580 KKAVPLRTNTD--IPV 593
           KK+     N D  IPV
Sbjct: 528 KKSYHESMNADKKIPV 543


>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 598

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/504 (51%), Positives = 353/504 (70%), Gaps = 1/504 (0%)

Query: 92  EFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLS 151
           E WFVK+ CT+ +RS+ L D    Y  + L+P    EV+ RL  P LG KF+EF R  L 
Sbjct: 8   EAWFVKIACTVFVRSNSL-DPFVGYFSKHLTPSLVYEVVNRLHIPNLGFKFVEFCRHKLH 66

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           ++HS+ TY+L++RSLC   LH + +VV+D+MR DG +P++ ++ F V S    G+ D ++
Sbjct: 67  MSHSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSR 126

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            LL+  +   V ++  +YN L N L++QN   +AV +F+E  RL  +P T+T NIL++GL
Sbjct: 127 ELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGL 186

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            R GE+ +AF    D+ SFGC PD++TYNTLI GLCR+NEV R   LLKEV    EF+PD
Sbjct: 187 CRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPD 246

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VV+YT++ISGYCK  KM++   ++ EM   G  P+  TFN LI GFGK+G+M SA  + E
Sbjct: 247 VVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYE 306

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +ML  G +PDV TF+SLI+GY R GQ++Q + +  +M  KN+   +YTF++L++ LC  N
Sbjct: 307 KMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNN 366

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           RL+ AR  L+ L  +D+VP+PF+YNPVIDG+CK+GNVDEAN IVAEME  RCKPDK+TFT
Sbjct: 367 RLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFT 426

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           ILIIGHCMKGRM EAI IF+KML +GCAPD+ITVN+L SCLLK GMP EA R+ +  +++
Sbjct: 427 ILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLAQN 486

Query: 572 QNLQLPSWKKAVPLRTNTDIPVAA 595
             L + S KK+    TN  IPVA 
Sbjct: 487 LTLGITSSKKSYHETTNESIPVAV 510


>gi|356517946|ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 511

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 254/505 (50%), Positives = 353/505 (69%), Gaps = 2/505 (0%)

Query: 92  EFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDN-PKLGLKFLEFSRVNL 150
           E WFVK+  T+ +R++ L D    Y    L+P    EV+ +L   P  G KF+EFSR  L
Sbjct: 8   EAWFVKIAYTVCVRANLL-DPLVGYFSNHLTPSLVYEVVDKLSIIPHFGFKFVEFSRHKL 66

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            ++HS+ TY+L++RSLC   LH + +VV+D+MR DG +P++ ++ F VSS    G+ D +
Sbjct: 67  HMSHSYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVS 126

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + LL+  +   V ++  +YN L N L++QN   +AV +F+E  RL  +P T+T NILI+G
Sbjct: 127 RELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRG 186

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L R+GE+ +AF+   D+ SFGC PD++TYNTLI GLC +NEV R   LL+EV    EF+P
Sbjct: 187 LCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLNGEFAP 246

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DVV+YT +ISGYCKL KM++ + +++EM + G  P+  TFN LIDGFGK+G+M SA  + 
Sbjct: 247 DVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALY 306

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            +ML  G LPDV TF+SLI+G+ R  Q++Q + +  +M  KN+  ++YT+++L++ LC  
Sbjct: 307 SKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNN 366

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           NRL+ AR  L+ L  +D+VP+PF+YNPVIDG+CK+GNVDEAN IVAEME  RCKPDK+TF
Sbjct: 367 NRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTF 426

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           TILIIGHCMKGRM EAI  F+KML +GCAPD+ITVN+L SCLLK GMP EA R+ +  ++
Sbjct: 427 TILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQ 486

Query: 571 DQNLQLPSWKKAVPLRTNTDIPVAA 595
           +  L   S KK+    T   IPVA 
Sbjct: 487 NLTLGTTSSKKSYHETTYVSIPVAV 511


>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Brachypodium distachyon]
          Length = 560

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/459 (47%), Positives = 294/459 (64%), Gaps = 12/459 (2%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR-SDGHLPNSPMIEFFVSS 200
           F       L++  S  +Y  V+  LC+   H     +FD M    GH PN+  + F   S
Sbjct: 107 FSALHSSQLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGS 166

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR--LYSQ 258
           C  AG  DAA  LLS+       +  + YN L+N+ +      +AV +F+ + +   YS 
Sbjct: 167 CANAGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYS- 225

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD W+FN+ I+G+ ++G+V+KA E    M  FGCSPD VT N L+ GLCRV EV+RG E+
Sbjct: 226 PDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREV 285

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+ ++      P+VVTYTSVISGYCK G+M+ A  +YN+M  CG  P+AVT+NVLI+G+G
Sbjct: 286 LRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYG 345

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K GNM SA  + ++M+     PDVVTFS+LIDGYCR GQL+  ++   EM    + PN +
Sbjct: 346 KAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAH 405

Query: 439 TFTILINALCKENRLNDARRFLKQLKW-NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           TF+I+I + CK+NR  +A RFLK+L    D+ P+ F+ NPVID  CK G VDEAN+I+ E
Sbjct: 406 TFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILME 465

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           ME K C+PDK T+TILIIGHCMKGR+ EAI+ FNKM+  GC+PD ITVNS I CLLK GM
Sbjct: 466 MEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGM 525

Query: 558 PNEAFRIMQRA--SEDQNLQLPSWKKAVPLRTNTDIPVA 594
           P+E  RIM+ A  S   + ++PS     P+  + DI VA
Sbjct: 526 PSEVDRIMKIASGSTSSSQEVPS-----PVSQSIDISVA 559


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/424 (49%), Positives = 288/424 (67%), Gaps = 5/424 (1%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCD 208
           LS+  S ++Y+ V+  LC  G H     +FD M    G+LP++    F   SC  AG  D
Sbjct: 105 LSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLD 164

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR--LYSQPDTWTFNI 266
           AA  LL++       +  + YN+LLN L+ +  A +AV +F+ + +  LYS PD W+FN+
Sbjct: 165 AAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYS-PDGWSFNV 223

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I+G+ R+G  +KA E    M  FGCSPD +T+N L+ GLCR  +V RGH+LL+ ++   
Sbjct: 224 VIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDG 283

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              P+VVTYTSVISGYCK G+M+ A  +YN+M   G +P+ VT+NVLI+G+GK  +M SA
Sbjct: 284 VCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESA 343

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             M  +++     PDVVTFSSLIDGYCR GQL+  +++  EM   ++ PNVYTF+I+I++
Sbjct: 344 VRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHS 403

Query: 447 LCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           LCK+NR  +A  FL++L    D+ P+ F+YNPVID  CK G V+EAN+IV +MEEK C P
Sbjct: 404 LCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHP 463

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           DK T+TILIIGHCMKGR+ EAI++F+KM+  GC PD ITVNS ISC+LK GMPNE  +IM
Sbjct: 464 DKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM 523

Query: 566 QRAS 569
             AS
Sbjct: 524 LIAS 527



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 138/281 (49%), Gaps = 2/281 (0%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P   +Y+ +I+ LCR        +L  ++  +S + PD V ++ V       G +D A  
Sbjct: 109 PSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVT 168

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG-YLPDVVTFSSLIDGY 412
           +  + +  G +     +N L++     G    A  + E  +  G Y PD  +F+ +I G 
Sbjct: 169 LLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGV 228

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL-VPK 471
           CR G   + L+L + M     SP+  T  IL++ LC+  ++N     L++L+ + + +P 
Sbjct: 229 CRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPN 288

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              Y  VI G+CKAG +++A  +  +M E   +P+ VT+ +LI G+     M  A+ ++ 
Sbjct: 289 VVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 348

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +++   C PD +T +SLI    + G  ++A RI +   +  
Sbjct: 349 QLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHH 389


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/451 (47%), Positives = 297/451 (65%), Gaps = 12/451 (2%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCD 208
           LS+  S  +   ++  LC  G       +FD M +  G+ P++  + F VSSC  A   D
Sbjct: 136 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 195

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF--RLYSQPDTWTFNI 266
           A+  LLS+       +  + YN L+++L+ +    + V +F+ +   RLYS PD W+FN+
Sbjct: 196 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYS-PDVWSFNV 254

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I+G+ R+G+V+KA E    M  FGCSPD VT+N ++ GLCR NEV+RGHE+L+ ++   
Sbjct: 255 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 314

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              P+VVT+TSVISGYCK GK++ A  +YN+M + GI P+ VT+NVLI+G+GKVG++ SA
Sbjct: 315 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 374

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + ++M      PDVVTFSSLIDGYCR GQL+  L++  +M    + PNVYTF+I+I++
Sbjct: 375 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 434

Query: 447 LCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           LCK+NR ++A R L +L    D+ P+ F+YNPVID  CK G VDEAN+I   MEEK C+P
Sbjct: 435 LCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 494

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           DK T+TILIIG+CMK R+ EAI  F++M+  GC+PD ITVN  ISCLLK GMPNE   +M
Sbjct: 495 DKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 554

Query: 566 QRASEDQN--LQLPSWKKAVPLRTNTDIPVA 594
           + AS   +   + PS     P+R   DI VA
Sbjct: 555 RLASGGASSIQEFPS-----PVRQRLDISVA 580


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/451 (46%), Positives = 297/451 (65%), Gaps = 12/451 (2%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCD 208
           LS+  S  +   ++  LC  G       +FD M +  G+ P++  + F VSSC  A   D
Sbjct: 138 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 197

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF--RLYSQPDTWTFNI 266
           A+  LLS+       +  + YN L+++L+ +    + V +F+ +   R+YS PD W+FN+
Sbjct: 198 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYS-PDVWSFNV 256

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I+G+ R+G+V+KA E    M  FGCSPD VT+N L+ GLCR NEV+RGHE+L+ ++   
Sbjct: 257 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 316

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              P+VVT+TSVISGYCK GK++ A  +YN+M + GI P+ VT+NVLI+G+GKVG++ SA
Sbjct: 317 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 376

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + ++M      PDVVTFSSLIDGYCR GQL+  L++  +M    + PNVYTF+I+I++
Sbjct: 377 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 436

Query: 447 LCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           LCK+NR ++A   L +L    D+ P+ F+YNPVID  CK G VDEAN+I   MEEK C+P
Sbjct: 437 LCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 496

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           DK T+TILIIG+CMK R+ EAI  F++M+  GC+PD ITVN  ISCLLK GMPNE   +M
Sbjct: 497 DKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 556

Query: 566 QRASEDQN--LQLPSWKKAVPLRTNTDIPVA 594
           + AS   +   ++PS     P+R   DI VA
Sbjct: 557 RLASGGASSIQEVPS-----PVRQRLDISVA 582


>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/456 (46%), Positives = 297/456 (65%), Gaps = 8/456 (1%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR-SDGHLPNSPMIEFFVSSC 201
           L      L++  S  +Y  V+  +C+ G H     +FD M    G+ PN+  + F   SC
Sbjct: 114 LHSPHSQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSC 173

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR--LYSQP 259
             AG  DAA  LLS+      ++  + YN L++  +      +AV +F+ + +  +YS P
Sbjct: 174 AAAGLLDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYS-P 232

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D W+FN++I+G+ ++G+V+KA E    M  FGCSPD VT+N L++GLCR  EV++G E+L
Sbjct: 233 DVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVL 292

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           + ++      P+VVTYTSVISGYCK G+M+ A  +YN+M + G  P+ VT+NVLI+G+GK
Sbjct: 293 RRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGK 352

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            GNM SA  + ++M+    LPDVVTFSSLIDGYCR GQL+  +K+  EM   ++ PN +T
Sbjct: 353 AGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHT 412

Query: 440 FTILINALCKENRLNDARRFLKQLKW-NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           F I+I+  CK+NR  +A  FLK++    D+ P+ F+YNPVID  CK G VDEAN+I+ EM
Sbjct: 413 FCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEM 472

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           EEK C+PDK T+TILIIGHCMKGR+ EA++ F+KM+  GC+PD I VNS ISCLLK GMP
Sbjct: 473 EEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMP 532

Query: 559 NEAFRIMQRASEDQNLQLPSWKKAVPLRTNTDIPVA 594
            E   IM+ A+   +    SWK   P+  + DI VA
Sbjct: 533 GEVDHIMRIAAGGAS---SSWKDPSPVTQSIDISVA 565


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/451 (46%), Positives = 296/451 (65%), Gaps = 12/451 (2%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCD 208
           LS+  S  +   ++  LC  G       +FD M +  G+ P++  + F VSSC  A   D
Sbjct: 141 LSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLD 200

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF--RLYSQPDTWTFNI 266
           A+  LLS+       +  + YN L+++L+ +    + V +F+ +   R+YS PD W+FN+
Sbjct: 201 ASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYS-PDVWSFNV 259

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I+G+ R+G+V+KA E    M  FGCSPD VT+N ++ GLCR NEV+RGHE+L+ ++   
Sbjct: 260 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 319

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              P+VVT+TSVISGYCK GK++ A  +YN+M + GI P+ VT+NVLI+G+GKVG++ SA
Sbjct: 320 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 379

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + ++M      PDVVTFSSLIDGYCR GQL+  L++  +M    + PNVYTF+I+I++
Sbjct: 380 VEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHS 439

Query: 447 LCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           LCK+NR ++A   L +L    D+ P+ F+YNPVID  CK G VDEAN+I   MEEK C+P
Sbjct: 440 LCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRP 499

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           DK T+TILIIG+CMK R+ EAI  F++M+  GC+PD ITVN  ISCLLK GMPNE   +M
Sbjct: 500 DKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 559

Query: 566 QRASEDQN--LQLPSWKKAVPLRTNTDIPVA 594
           + AS   +   + PS     P+R   DI VA
Sbjct: 560 RLASGGASSIQEFPS-----PVRQRLDISVA 585


>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
          Length = 547

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/456 (46%), Positives = 294/456 (64%), Gaps = 8/456 (1%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVN---LSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
           L+P +   V      P  G     FS ++   LS+  S ++Y  V+  LC  G H     
Sbjct: 70  LTPSHLAAVAAVRLAPCAGSALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALK 129

Query: 178 VFD-YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
           +FD  M   G+LP +    F   SC  AG  DAA  LL++       +  + YN LLN+L
Sbjct: 130 LFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSL 189

Query: 237 VKQNNADEAVYMFKEYFR--LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           +    A +AV +F+ + +  LYS PD W+FN++I+G+ R+G  +KA E    M  FGCSP
Sbjct: 190 IAHGRAQDAVALFESWIQDGLYS-PDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSP 248

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D +T+N L+ GLCR  +V +GHE+L+ ++      P+ VTYTSVISGYCK GKM+ A  +
Sbjct: 249 DTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSV 308

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           YN+M   G +P+ VT+NVLI+G+GK  +M SA  M  +++     PDVVTFSSLIDGYCR
Sbjct: 309 YNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCR 368

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW-NDLVPKPF 473
            GQL+   ++  EM   ++ PNVYTF+I+I++LCK+NR  +A   L++L    D+ P+ F
Sbjct: 369 CGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTF 428

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           +YNPVID  CK G VDEAN+IV +M+EK C PDK T+TILIIGHCMKGR+ EAI++F+KM
Sbjct: 429 IYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKM 488

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  GC PD+ITVNS +SC+LK GMPNE  +IM  AS
Sbjct: 489 VEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIAS 524



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 2/174 (1%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLNDARR 458
           P   ++  +I   CR+G+    LKL D+M  ++   P    F+ +  +      L+ A  
Sbjct: 106 PSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAAST 165

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE-MEEKRCKPDKVTFTILIIGH 517
            L +        +P+ YN +++     G   +A  +    +++    PD  +F ++I G 
Sbjct: 166 LLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGV 225

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C  G   +A+ +  +M   GC+PD IT N L+  L +    N+   +++R   D
Sbjct: 226 CRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRD 279


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/414 (48%), Positives = 282/414 (68%), Gaps = 11/414 (2%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G+ P++  + F VSSC  A   DA+  LLS+       +  + YN L+++L+ +    + 
Sbjct: 6   GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65

Query: 246 VYMFKEYF--RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           V +F+ +   R+YS PD W+FN++I+G+ R+G+V+KA E    M  FGCSPD VT+N L+
Sbjct: 66  VALFERWIQDRVYS-PDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILV 124

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GLCR NEV+RGHE+L+ ++      P+VVT+TSVISGYCK GK++ A  +YN+M + GI
Sbjct: 125 DGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 184

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ VT+NVLI+G+GKVG++ SA  + ++M      PDVVTFSSLIDGYCR GQL+  L+
Sbjct: 185 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALR 244

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGF 482
           +  +M    + PNVYTF+I+I++LCK+NR ++A   L +L    D+ P+ F+YNPVID  
Sbjct: 245 IWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVL 304

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G VDEAN+I   MEEK C+PDK T+TILIIG+CMK R+ EAI  F++M+  GC+PD 
Sbjct: 305 CKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDS 364

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQN--LQLPSWKKAVPLRTNTDIPVA 594
           ITVN  ISCLLK GMPNE   +M+ AS   +   ++PS     P+R   DI VA
Sbjct: 365 ITVNCFISCLLKAGMPNEVDHVMRLASGGASSIQEVPS-----PVRQRLDISVA 413



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 162/338 (47%), Gaps = 4/338 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            YN +M SL   G +HD V +   +++   + P+       +    R G+   A  L+ +
Sbjct: 48  AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 107

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSRIG 275
                 +  T  +N L++ L + N       + +   R     P+  TF  +I G  + G
Sbjct: 108 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 167

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +++ A   + DM + G  P+ VTYN LI+G  +V ++    E+ +++  +    PDVVT+
Sbjct: 168 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMT-RLRCPPDVVTF 226

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERML 394
           +S+I GYC+ G++D A  I+++M    I+P+  TF+++I    K      A   + E  L
Sbjct: 227 SSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNL 286

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                P    ++ +ID  C+ G++++   +   M+ K   P+ YT+TILI   C ++R++
Sbjct: 287 RPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRIS 346

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +A  F  ++      P     N  I    KAG  +E +
Sbjct: 347 EAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVD 384



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 37/211 (17%)

Query: 396 FGYLPDV---------VTFSSLIDGY-----------CR---------------NGQLNQ 420
           +GY PD           T ++L+D             CR                G+++ 
Sbjct: 5   YGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHD 64

Query: 421 GLKLCDE-MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            + L +  ++ +  SP+V++F ++I  +C+  ++  A   ++++      P    +N ++
Sbjct: 65  VVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILV 124

Query: 480 DGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           DG C+   V   + ++  ++ +  C P+ VTFT +I G+C  G++ +A++++N M+  G 
Sbjct: 125 DGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGI 184

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            P+ +T N LI+   K G    A  + Q+ +
Sbjct: 185 MPNTVTYNVLINGYGKVGDLGSAVEVYQQMT 215


>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
          Length = 414

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 193/387 (49%), Positives = 269/387 (69%), Gaps = 4/387 (1%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G++P++    F   SC  AG  DAA  LL++       +  + YN+LLN L+    A +A
Sbjct: 6   GYVPDAGFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDA 65

Query: 246 VYMFKEYFR--LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           V +F+ + +  LYS PD W+FN++I+G+ R+G ++KA E    M  FGCSPD +T N L+
Sbjct: 66  VALFESWIQDGLYS-PDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILV 124

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GLCRV +V +GHE+L+ ++      P+VVTYTSVISGYCK G+M  A  +YN+M   G 
Sbjct: 125 DGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGT 184

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P+ VT+NVLI+G+GK  +M SA  M  +++     PDVVTF+SLIDGYCR GQL+  ++
Sbjct: 185 RPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMR 244

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGF 482
           +  EM   ++ PNVYTF+I+I++LC +NR  +A   L++L    D+VP+ F+YNP+ID  
Sbjct: 245 IWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDIL 304

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G VDEAN+IV +MEEK C PDK T+TILIIGHCMKGR+ EA+++F+KM+  GC PD+
Sbjct: 305 CKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDN 364

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRAS 569
           IT+NS ISC+LK GMPNE  +IM  AS
Sbjct: 365 ITINSFISCVLKAGMPNEVHQIMLIAS 391



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 35/263 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ G       V++ M   G  PN+      ++   +A   ++A  +  Q 
Sbjct: 155 TYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQL 214

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +NSL++   +    D+A+ ++ E  + + QP+ +TF+I+I         
Sbjct: 215 ILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIH-------- 266

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                                       LC  N  A    LL+E+  +++  P    Y  
Sbjct: 267 ---------------------------SLCTQNRSAEALSLLRELNMRADIVPQTFIYNP 299

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK GK+D+A  I  +M   G  P   T+ +LI G    G +  A  +  +M+  G
Sbjct: 300 IIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETG 359

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQ 420
             PD +T +S I    + G  N+
Sbjct: 360 CRPDNITINSFISCVLKAGMPNE 382



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 1/138 (0%)

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+   F+ +  +      L+ A   L +  W     + + YN +++     G   +A  +
Sbjct: 9   PDAGFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVAL 68

Query: 495 V-AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
             + +++    PD  +F ++I G C  G + +A+ +  +M   GC+PD IT N L+  L 
Sbjct: 69  FESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLC 128

Query: 554 KGGMPNEAFRIMQRASED 571
           +    N+   +++R   D
Sbjct: 129 RVKQVNKGHEVLRRLQRD 146


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 223/409 (54%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+   C     D+   +F  M  +G +PN       +S   R G  D A  LL + 
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +    F Y++L+  L K    D A+ +F++       PD   ++ LI GL + G +
Sbjct: 258 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRL 317

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M    C PD+VT+  L+ GLC+ + +    ++L+ ++ ++  +P+V+TY+S
Sbjct: 318 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN-CTPNVITYSS 376

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G++  A  ++  M   GI+P+ VT+N LI GF     + SA  + E M + G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD++T+++LIDG C+ G+  +  +L  +MK K  +P+V T++ LI   CK  R++ AR
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +    ++P    ++ +++G+C AG VD+A  ++ EM    C PD  T+T L+ G 
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C  GRMVEA  +  +M + GC P+ +T  +LI    + G P  A+R+++
Sbjct: 557 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 215/418 (51%), Gaps = 1/418 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  GL D    + D MR  G  P+    +  ++   + GK D A  +    
Sbjct: 233 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 292

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G+       Y++L+  L K    DEA  +F++      +PD  TF  L+ GL +   +
Sbjct: 293 SNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 352

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M    C+P+++TY++LI GLC+  +V    E+ K +  +    P+VVTY S
Sbjct: 353 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG-IEPNVVTYNS 411

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C    +D A  +  EM + G  P  +T+N LIDG  K G    A  +   M +  
Sbjct: 412 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV+T+S LI G+C+  +++    L D+M  + + P+V TF+ L+   C    ++DA 
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 531

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L+++  +D  P  + Y  ++DGFCK G + EA  ++  M ++ C+P+ VT+T LI   
Sbjct: 532 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 591

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           C  G+   A  +  +M+  G  P+ IT  SLI      G   EA +I++R   D+N +
Sbjct: 592 CRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCK 649



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 235/468 (50%), Gaps = 41/468 (8%)

Query: 133 LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           + +P   L+F  ++      +H+  TYN +  +L      D    +       G  PN  
Sbjct: 1   MSDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVF 60

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +    ++G  D A  LL + R         +YN +++AL K  N  +A+    +Y
Sbjct: 61  TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKAL----DY 116

Query: 253 FR-LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           FR +  + +  T+ I+I GL +   + +A  +F  M   G  P+  TYN LI+G C+V++
Sbjct: 117 FRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           V R + LLKE+K +S  +P+VVTY++VI G+C+  K+D A  ++ +M   G  P+ VT+N
Sbjct: 177 VHRAYLLLKEMK-ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 235

Query: 372 VLIDGFGKVGNMVSA----EYMRERMLS---FGY-------------------------- 398
            L+ G  + G M  A    + MRER L    F Y                          
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295

Query: 399 --LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PDVV +S+LI G C+ G+L++  KL ++M+  +  P+V TFT L++ LCK +RL +A
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 355

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++ L+ ++  +  P    Y+ +IDG CK G V +A  +   M  +  +P+ VT+  LI G
Sbjct: 356 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 415

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            CM   +  A+ +  +M   GC PD IT N+LI  L K G   EA R+
Sbjct: 416 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 463



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 212/413 (51%), Gaps = 2/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++  LC+ G  D    +F+ MR +   P+       +    +  +   A+ +L   
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   Y+SL++ L K     +A  +FK       +P+  T+N LI G      V
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M + GC PDI+TYNTLI GLC+       + L  ++K K   +PDV+TY+ 
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDVITYSC 481

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CKL ++D A  ++++M    + P  VTF+ L++G+   G +  AE + E M++  
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV T++SL+DG+C+ G++ +  ++   M  +   PNV T+T LI+A C+  +   A 
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILIIG 516
           R L+++  N + P    Y  +I GFC  G+++EA  I+  +E ++ CK D   + +++ G
Sbjct: 602 RLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDG 661

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            C  GRM  A+ +   + + G  P      +LI  L +G    +A  +++  +
Sbjct: 662 LCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 714



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 200/440 (45%), Gaps = 42/440 (9%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           RLD      K  E  R N S      T+  +M  LC+       Q V + M      PN 
Sbjct: 316 RLDE---ACKLFEKMREN-SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 371

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +    + G+   A+ +  +     +  +   YNSL++     N  D A+ + +E
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 431

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                  PD  T+N LI GL + G   +A   F DM +  C+PD++TY+ LI G C++  
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +     L  ++  K    PDVVT+++++ GYC  G +D A  +  EM +    P   T+ 
Sbjct: 492 IDMARTLFDDM-LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L+DGF KVG MV A  + +RM   G  P+VVT+++LID +CR G+     +L +EM G 
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610

Query: 432 NLSPNVYTFT------------------------------------ILINALCKENRLND 455
            + PNV T+                                     ++++ LC+  R++ 
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILI 514
           A   L+ +K +   P+  +Y  +I G C+   + +A  ++ EM   ++ +P+   +  +I
Sbjct: 671 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730

Query: 515 IGHCMKGRMVEAISIFNKML 534
                +GR  EA ++ +++L
Sbjct: 731 QELAREGRHEEANALADELL 750



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 166/312 (53%), Gaps = 4/312 (1%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           + +T+N L + L R   + +      +    G +P++ TY  +I GLC+  ++ +  ELL
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E++ +S   PD   Y  VI   CK     KA   +  M     + + +T+ ++IDG  K
Sbjct: 83  EEMR-ESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC---EKNVITWTIMIDGLCK 138

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              +  A     +M   G +P+  T++ LI+G+C+  ++++   L  EMK   L+PNV T
Sbjct: 139 ANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT 198

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ +I+  C++ +++ A +  +Q+  N  +P    YN ++ G C+ G +DEA  ++ EM 
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E+  +PDK ++  L+ G C  G++  A+ +F       C PD +  ++LI+ L K G  +
Sbjct: 259 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLD 318

Query: 560 EAFRIMQRASED 571
           EA ++ ++  E+
Sbjct: 319 EACKLFEKMREN 330



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 1/279 (0%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N    TY+ ++   C++   D  + +FD M     LP+       V     AG  D A+ 
Sbjct: 473 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 532

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL +    + +   + Y SL++   K     EA  + K   +   QP+  T+  LI    
Sbjct: 533 LLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 592

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R G+   A+    +M   G  P+++TY +LI G C   ++    ++L+ ++       D+
Sbjct: 593 RAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADM 652

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRE 391
             Y  ++ G C+ G+M  A  +   +   G  P    +  LI G  +   +  A E + E
Sbjct: 653 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE 712

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
             LS    P+   + ++I    R G+  +   L DE+ G
Sbjct: 713 MTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 751


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 223/409 (54%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+   C     D+   +F  M  +G +PN       +S   R G  D A  LL + 
Sbjct: 79  TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 138

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +    F Y++L+  L K    D A+ +F++       PD   ++ LI GL + G +
Sbjct: 139 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRL 198

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M    C PD+VT+  L+ GLC+ + +    ++L+ ++ ++  +P+V+TY+S
Sbjct: 199 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN-CTPNVITYSS 257

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G++  A  ++  M   GI+P+ VT+N LI GF     + SA  + E M + G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD++T+++LIDG C+ G+  +  +L  +MK K  +P+V T++ LI   CK  R++ AR
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +    ++P    ++ +++G+C AG VD+A  ++ EM    C PD  T+T L+ G 
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C  GRMVEA  +  +M + GC P+ +T  +LI    + G P  A+++++
Sbjct: 438 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLE 486



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 215/418 (51%), Gaps = 1/418 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  GL D    + D MR  G  P+    +  ++   + GK D A  +    
Sbjct: 114 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDN 173

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G+       Y++L+  L K    DEA  +F++      +PD  TF  L+ GL +   +
Sbjct: 174 SNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRL 233

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M    C+P+++TY++LI GLC+  +V    E+ K +  +    P+VVTY S
Sbjct: 234 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG-IEPNVVTYNS 292

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C    +D A  +  EM + G  P  +T+N LIDG  K G    A  +   M +  
Sbjct: 293 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV+T+S LI G+C+  +++    L D+M  + + P+V TF+ L+   C    ++DA 
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L+++  +D  P  + Y  ++DGFCK G + EA  ++  M ++ C+P+ VT+T LI   
Sbjct: 413 RLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF 472

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           C  G+   A  +  +M+  G  P+ IT  SLI      G   EA ++++R   D+N +
Sbjct: 473 CRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCK 530



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 214/409 (52%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++  LC+          F  M+  G +PN       ++   +  K   A  LL + 
Sbjct: 9   TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  +   Y+++++   +Q   D A  +F++       P+  T+N L+ GL R G +
Sbjct: 69  KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+E   +M   G  PD  +Y+TL++GLC+  ++    ++ ++     +  PDVV Y++
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFED-NSNGDCPPDVVAYST 187

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK G++D+A  ++ +M     +P  VTF  L+DG  K   +  A+ + E M    
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V+T+SSLIDG C+ GQ+    ++   M  + + PNV T+  LI+  C  N ++ A 
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++++     +P    YN +IDG CK G   EAN +  +M+ K C PD +T++ LI G 
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C   R+  A ++F+ ML+    PD +T ++L+      G+ ++A R+++
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 416



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 212/412 (51%), Gaps = 2/412 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++  LC+ G  D    +F+ MR +   P+       +    +  +   A+ +L    
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
               T +   Y+SL++ L K     +A  +FK       +P+  T+N LI G      V 
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 304

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     +M + GC PDI+TYNTLI GLC+       + L  ++K K   +PDV+TY+ +
Sbjct: 305 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDVITYSCL 363

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CKL ++D A  ++++M    + P  VTF+ L++G+   G +  AE + E M++   
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PDV T++SL+DG+C+ G++ +  ++   M  +   PNV T+T LI+A C+  +   A +
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILIIGH 517
            L+++  N + P    Y  +I GFC  G+++EA  ++  +E ++ CK D   + +++ G 
Sbjct: 484 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGL 543

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           C  GRM  A+ +   + + G  P      +LI  L +G    +A  +++  +
Sbjct: 544 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 595



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 196/344 (56%), Gaps = 1/344 (0%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           E   +   +  +++ L K N   EA   F +  +  + P+ WT+N+LI G  ++ +V +A
Sbjct: 2   ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
           +    +M   G +P++VTY+T+I G CR  +V   ++L +++  ++   P++VTY +++S
Sbjct: 62  YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM-VENGCMPNLVTYNTLLS 120

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G C+ G MD+A  + +EM   G++P   +++ L+ G  K G +  A  + E   +    P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           DVV +S+LI G C+ G+L++  KL ++M+  +  P+V TFT L++ LCK +RL +A++ L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           + ++  +  P    Y+ +IDG CK G V +A  +   M  +  +P+ VT+  LI G CM 
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             +  A+ +  +M   GC PD IT N+LI  L K G   EA R+
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 344



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 200/440 (45%), Gaps = 42/440 (9%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           RLD      K  E  R N S      T+  +M  LC+       Q V + M      PN 
Sbjct: 197 RLDE---ACKLFEKMREN-SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +    + G+   A+ +  +     +  +   YNSL++     N  D A+ + +E
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                  PD  T+N LI GL + G   +A   F DM +  C+PD++TY+ LI G C++  
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +     L  ++  K    PDVVT+++++ GYC  G +D A  +  EM +    P   T+ 
Sbjct: 373 IDMARTLFDDM-LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L+DGF KVG MV A  + +RM   G  P+VVT+++LID +CR G+     KL +EM G 
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491

Query: 432 NLSPNVYTFT------------------------------------ILINALCKENRLND 455
            + PNV T+                                     ++++ LC+  R++ 
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILI 514
           A   L+ +K +   P+  +Y  +I G C+   + +A  ++ EM   ++ +P+   +  +I
Sbjct: 552 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 611

Query: 515 IGHCMKGRMVEAISIFNKML 534
                +GR  EA ++ +++L
Sbjct: 612 QELAREGRHEEANALADELL 631



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 154/276 (55%), Gaps = 1/276 (0%)

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C  +++T+  +I GLC+ N +        ++K K    P+  TY  +I+G+CK+ K+ +A
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRA 61

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             +  EM   G+ P+ VT++ +I GF +   + +A  +  +M+  G +P++VT+++L+ G
Sbjct: 62  YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            CRNG +++  +L DEM+ + L P+ +++  L+  LCK  +++ A +  +     D  P 
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              Y+ +I G CK G +DEA  +  +M E  C+PD VTFT L+ G C   R+ EA  +  
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            M    C P+ IT +SLI  L K G   +A  + +R
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKR 277



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 136/247 (55%), Gaps = 1/247 (0%)

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           E   +V+T+T +I G CK  ++ +AT  + +M   G  P+  T+NVLI+GF KV  +  A
Sbjct: 2   ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + + M   G  P+VVT+S++I G+CR  +++   KL  +M      PN+ T+  L++ 
Sbjct: 62  YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LC+   +++A   L +++   L P  F Y+ ++ G CK G +D A  +  +     C PD
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            V ++ LI G C  GR+ EA  +F KM    C PD +T  +L+  L KG    EA ++++
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 567 RASEDQN 573
              ED+N
Sbjct: 242 -TMEDRN 247



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 1/279 (0%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N    TY+ ++   C++   D  + +FD M     LP+       V     AG  D A+ 
Sbjct: 354 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 413

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL +    + +   + Y SL++   K     EA  + K   +   QP+  T+  LI    
Sbjct: 414 LLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 473

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R G+   A++   +M   G  P+++TY +LI G C   ++    ++L+ ++       D+
Sbjct: 474 RAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADM 533

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRE 391
             Y  ++ G C+ G+M  A  +   +   G  P    +  LI G  +   +  A E + E
Sbjct: 534 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEE 593

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
             LS    P+   + ++I    R G+  +   L DE+ G
Sbjct: 594 MTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 632


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 146/425 (34%), Positives = 227/425 (53%), Gaps = 17/425 (4%)

Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN+++R+LC  G   +++ VV D MR  G  PN       V++  RAG+ DAA+ L+  
Sbjct: 156 TYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGV 215

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G V  S   +N+++N L K    ++A  MF E  R    PD  ++N L+ G  + G 
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A   F +M   G  PD+VT+ +LI  +CR   + R   L+ +++ +     +  T+T
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERG-LRMNEFTFT 334

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+C+ G +D A     EM  C I+PS V +NVLI+G+ K+G M  A  +   M + 
Sbjct: 335 ALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAK 394

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDVVT+S+++ GYC+ G  +   +L  +M  K + P+  T++ LI  LC+E RL DA
Sbjct: 395 GMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDA 454

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +++    L P  F Y  +IDG CK GNV +A  +  EM +K   PD VT+++LI G
Sbjct: 455 CELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC-----------LLKG----GMPNEA 561
                R  EA  +  K+      PD+I   +L+ C           LLKG    G+ N+A
Sbjct: 515 LSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQA 574

Query: 562 FRIMQ 566
            ++ Q
Sbjct: 575 DKVYQ 579



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 220/427 (51%), Gaps = 16/427 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T+N V+  LC+ G  +  + +FD M  +G  P+       VS   +AG    A  + 
Sbjct: 224 SLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVF 283

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++     V      + SL++A+ +  N + AV +  +      + + +TF  LI G  R 
Sbjct: 284 AEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRN 343

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +  A     +M      P +V YN LI+G C++  +    EL+ E++ K    PDVVT
Sbjct: 344 GFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG-MKPDVVT 402

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y++++SGYCK+G  D A  +  +M   G+ P A+T++ LI G  +   +  A  + E+ML
Sbjct: 403 YSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKML 462

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD  T+++LIDG+C+ G + + L L DEM  K + P+V T+++LI+ L K  R  
Sbjct: 463 QLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTK 522

Query: 455 DARRFLKQLKWNDLVPKPFMYN---------------PVIDGFCKAGNVDEANVIVAEME 499
           +A+R L +L + D VP    Y                 ++ GF   G +++A+ +   M 
Sbjct: 523 EAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSML 582

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           ++  K D   +++LI GHC  G +++A+S   ++LR G +P+  +  SL+  L + GM  
Sbjct: 583 DRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTV 642

Query: 560 EAFRIMQ 566
           EA  ++Q
Sbjct: 643 EADNVIQ 649



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/329 (35%), Positives = 186/329 (56%), Gaps = 3/329 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   YN++L AL    +   A  +     R    P+ +T+NIL++ L   G+ ++A    
Sbjct: 119 SLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVV 177

Query: 285 YD-MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
            D M   GC+P++VTYNTL++  CR  EV     L+  ++ +    P +VT+ +V++G C
Sbjct: 178 GDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMR-EGGVRPSLVTFNTVVNGLC 236

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G+M+ A  +++EM   G+ P  V++N L+ G+ K G +  A  +   M   G +PDVV
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           TF+SLI   CR G L + + L  +M+ + L  N +TFT LI+  C+   L+DA   +K++
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +   + P    YN +I+G+CK G +DEA  ++ EME K  KPD VT++ ++ G+C  G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCL 552
             A  +  KML+ G  PD IT +SLI  L
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGL 445



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 191/357 (53%), Gaps = 2/357 (0%)

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNIL 267
           +A+ LL+      V  + + YN L+ AL  +   +EA+ +  +  R     P+  T+N L
Sbjct: 137 SARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTL 196

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +    R GEV  A      M   G  P +VT+NT+++GLC+   +    ++  E+  +  
Sbjct: 197 VAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMA-REG 255

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +PD V+Y +++SGYCK G + +A  ++ EM   G+ P  VTF  LI    + GN+  A 
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAV 315

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +M   G   +  TF++LIDG+CRNG L+  L    EM+   + P+V  + +LIN  
Sbjct: 316 ALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGY 375

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  R+++AR  + +++   + P    Y+ ++ G+CK G+ D A  +  +M +K   PD 
Sbjct: 376 CKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDA 435

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +T++ LI G C + R+ +A  +F KML++G  PD+ T  +LI    K G   +A  +
Sbjct: 436 ITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSL 492



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 174/391 (44%), Gaps = 51/391 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++   C+ G       VF  M   G +P+       + +  RAG  + A  L+ Q 
Sbjct: 262 SYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQM 321

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   + M+ F + +L++   +    D+A+   KE      QP    +N+LI G  ++G +
Sbjct: 322 RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRM 381

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E  ++M + G  PD+VTY+T++SG C++ +     EL +++  K    PD +TY+S
Sbjct: 382 DEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKM-LKKGVVPDAITYSS 440

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C+  ++  A  ++ +M   G++P   T+  LIDG  K GN+  A  + + M+  G
Sbjct: 441 LIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG 500

Query: 398 YLPDVVTFSSLIDGY----------------------------------CRN-------- 415
            LPDVVT+S LIDG                                   CR         
Sbjct: 501 VLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVA 560

Query: 416 --------GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
                   G +NQ  K+   M  ++   +   +++LI+  C+   +  A  F KQL    
Sbjct: 561 LLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCG 620

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
             P       ++ G  + G   EA+ ++ E+
Sbjct: 621 FSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 2/244 (0%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
           ++P ++ Y +V+        +  A  +   M   G+ P+  T+N+L+      G    A 
Sbjct: 116 YAPSLLAYNAVLLALSD-ASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL 174

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + + M   G  P+VVT+++L+  +CR G+++   +L   M+   + P++ TF  ++N 
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK  R+ DAR+   ++    L P    YN ++ G+CKAG + EA  + AEM +K   PD
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            VTFT LI   C  G +  A+++  +M   G   ++ T  +LI    + G  ++A   M+
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 567 RASE 570
              E
Sbjct: 355 EMRE 358



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 134/327 (40%), Gaps = 53/327 (16%)

Query: 133 LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           LD+  L +K +   R+  S+      YN+++   C++G  D  + +   M + G  P+  
Sbjct: 346 LDDALLAMKEMRECRIQPSV----VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVV 401

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +S   + G  D+A  L  +     V      Y+SL+  L ++    +A  +F++ 
Sbjct: 402 TYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKM 461

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            +L  QPD +T+  LI G  + G V+KA     +M   G  PD+VTY+ LI GL +    
Sbjct: 462 LQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSART 521

Query: 313 ARGHELL----------------------KEVKFKS------------------------ 326
                LL                      +  +FKS                        
Sbjct: 522 KEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSM 581

Query: 327 ---EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
               +  D   Y+ +I G+C+ G + KA   + ++  CG  P++ +   L+ G  + G  
Sbjct: 582 LDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMT 641

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLID 410
           V A+ + + +L+   L D  T  +LID
Sbjct: 642 VEADNVIQELLNCCSLADAETSKALID 668


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 227/445 (51%), Gaps = 6/445 (1%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           L P     V++RL +P+  + F  ++  +    HS  T N  +++L E G  D +  +F+
Sbjct: 91  LQPAVVSRVLQRLKDPQTAIVFFVWAG-DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFE 149

Query: 181 YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
            M   G+ P+S      + S  +  + D A  +L + +         +Y  L  A  K  
Sbjct: 150 RMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTG 209

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
              +A+    E FR    PD   +N +I G  R  +   A EF  +M     +PD+ TYN
Sbjct: 210 RLKDAL----EIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYN 265

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI GLC+ ++  +  E+L E+  +   +PD VT+ S++ G CK GK ++A  +   M  
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRG-VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
              +PS  T+N LI G  K  N+  A+ + +  +S G++PDVVT+S L DG C+ G++++
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 384

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             +L  EM GK  +PN+ T+  LI+ LCK ++   A   L+ L  +  VP    Y  ++D
Sbjct: 385 AFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVD 444

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK G +D+A  +V  M ++ C P  +T+T L+ G C  GR+ EA  IF +M+   C  
Sbjct: 445 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 504

Query: 541 DDITVNSLISCLLKGGMPNEAFRIM 565
           D +   SL++   K     EA +++
Sbjct: 505 DALAYVSLVNGYCKSSRTKEAQKVV 529



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 225/481 (46%), Gaps = 69/481 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK----------- 206
           TY+LV++SLC+M   D    + D  +  G  P   +      +  + G+           
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221

Query: 207 --------------------CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
                               CD A   L +    +V    F YN L++ L K +  D+A 
Sbjct: 222 PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            M  E       PDT TFN ++ GL + G+ ++A      M    C P   TYNTLISGL
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+   V R  +L+ E    S F PDVVTY+ +  G CK G++D+A  +  EM+  G  P+
Sbjct: 342 CKQQNVDRAKDLVDEF-VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPN 400

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT+N LIDG  K      A  + E ++S G++PDVVT++ ++DG C+ G+L++ LK+ +
Sbjct: 401 LVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVE 460

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV----------------- 469
            M  +  +P+V T+T L+  LC+  R+++A    K++   D                   
Sbjct: 461 GMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSS 520

Query: 470 ---------------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
                          P   +YN ++DG+CK G +DE   +  +M  + C P+  T+ I++
Sbjct: 521 RTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 580

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G C  G++ EA      M   GC PD ++ N +I  L K   P EA +++     DQ +
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL-----DQMI 635

Query: 575 Q 575
           Q
Sbjct: 636 Q 636



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 217/409 (53%), Gaps = 4/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+    D    +   M   G  P++      +    +AGK + A  LL+  
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 322

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YN+L++ L KQ N D A  +  E+      PD  T++IL  GL + G +
Sbjct: 323 AERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI 382

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AFE   +M   GC+P++VTYNTLI GLC+ ++  + +ELL+ +   S F PDVVTYT 
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESL-VSSGFVPDVVTYTI 441

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK G++DKA  +   M   G  PS +T+  L++G  + G +  A ++ + M+S  
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 501

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D + + SL++GYC++ +  +  K+ D ++G   +P +  +  L++  CKE RL++  
Sbjct: 502 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIP 558

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +     VP    YN V+DG CK G VDEA   +  M    C PD V++ I+I G 
Sbjct: 559 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 618

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               +  EA  + ++M++ G  PD +T N+L++   K    ++A  I++
Sbjct: 619 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 667



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 212/465 (45%), Gaps = 39/465 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY  +M  LC  G  D    +F  M S     ++      V+   ++ +   A+ ++
Sbjct: 470 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 529

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              R    T    +YN+L++   K+   DE   +F++       P+  T+NI++ GL + 
Sbjct: 530 DGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 586

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+V +AF F   M S GC PD+V+YN +I GL + ++     ++L ++  ++   PD VT
Sbjct: 587 GKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM-IQAGIPPDAVT 645

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERM 393
           Y ++++ +CK  + D A GI   M   G+ P  VT+N LI G  +   +  A E M E +
Sbjct: 646 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            +   +    T++++ID  C+ G L Q L L D M G  +  N  T+ I I+ LCKE RL
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL 765

Query: 454 NDARRFLKQLKW---------------------------------NDLVPKPFMYNPVID 480
           ++A   L ++                                     L      +N +ID
Sbjct: 766 DEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 825

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            F K   +DEA  ++  M ++ C P  +T+ ++I   C   ++ +A  +F++M   G   
Sbjct: 826 AFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVA 885

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR-ASEDQNLQLPSWKKAVP 584
             ++   LI  L   G   EA ++++  AS D  +    W+   P
Sbjct: 886 SSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVAP 930



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 198/440 (45%), Gaps = 32/440 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    D  + + D   S G +P+            + G+ D A  L+ + 
Sbjct: 333 TYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 392

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   YN+L++ L K +  ++A  + +        PD  T+ I++ GL + G +
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS----------- 326
            KA +    M   GC+P ++TY  L+ GLCR   V   H + KE+  K            
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512

Query: 327 --------------------EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
                                 +P +  Y +++ GYCK G++D+   ++ +M   G  P+
Sbjct: 513 VNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 572

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+N+++DG  K G +  A    E M S G +PDVV+++ +IDG  +  +  +  ++ D
Sbjct: 573 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 632

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +M    + P+  T+  L+   CKE R +DA   LK +    + P    YN +I G  +  
Sbjct: 633 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 692

Query: 487 NVDEANVIVAEMEEKRCKPDK-VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
            + +A  ++ EM    C      T+  +I   C +G + +A+ + + M   G   + +T 
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752

Query: 546 NSLISCLLKGGMPNEAFRIM 565
           N  I  L K G  +EA  ++
Sbjct: 753 NIFIDRLCKEGRLDEASSLL 772



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 153/316 (48%), Gaps = 5/316 (1%)

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           RL     T    ++ + L R+ + + A  FF   G  G      T N  +  L       
Sbjct: 83  RLEQWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSD 142

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
           R   + + +   + ++PD  TY  VI   C++ ++DKA  + ++    G KP    + +L
Sbjct: 143 RIPAMFERM-LDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTIL 201

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
              F K G +  A  +   + S    PD + ++++I G+CR    +  L+   EM  + +
Sbjct: 202 TRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKV 257

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P+V+T+ ILI+ LCK ++ + A   L ++    + P    +N ++DG CKAG  + A+ 
Sbjct: 258 APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 317

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++A M E+ C+P   T+  LI G C +  +  A  + ++ +  G  PD +T + L   L 
Sbjct: 318 LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLC 377

Query: 554 KGGMPNEAFRIMQRAS 569
           K G  +EAF +++  S
Sbjct: 378 KRGRIDEAFELVKEMS 393



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 4/209 (1%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G K S  T N  +    + G+      M ERML  GY PD  T+  +I   C+  Q+++ 
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             + D+ K +   P V  +TIL  A CK  RL DA    + +      P    YN +I G
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHG 235

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C+  + D A   + EM E++  PD  T+ ILI G C   +  +A  + ++M+  G  PD
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD 295

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +T NS++  L K G    A  ++   +E
Sbjct: 296 TVTFNSIMDGLCKAGKFERAHSLLAVMAE 324


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 241/491 (49%), Gaps = 61/491 (12%)

Query: 109 LSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
           LSD  AR LC       ++ ++ RL +PK  L  L  +    + N   + +  +  S   
Sbjct: 94  LSD--ARTLCL------AIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDR 145

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           +G   S+  VFDY+               + SC    + D A       +   V  +   
Sbjct: 146 LGFKSSI--VFDYL---------------IKSCCDMNRADEAFECFYTMKEKGVLPTIET 188

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
            NSLL+  +K N  + A  ++ E FRL  +   +TFNI+I  L + G++KKA +F   M 
Sbjct: 189 CNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHME 248

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G  P+IVTYNT++ G C    V     +L  +K + +  PD  TY S+ISG CK G++
Sbjct: 249 TSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK-RQKIEPDSFTYGSLISGMCKQGRL 307

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML-------------- 394
           ++A+ I+ EM   G++PSAV +N LIDGF   GN+  A   ++ ML              
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367

Query: 395 ---------------------SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
                                  G  PD +T++ LI+GYCR     +   L DEM    +
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI 427

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P   T+T L++ L K+NR+ +A    K++    ++P   M+N +IDG C   NV  A  
Sbjct: 428 KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFE 487

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ +M+  +  PD+VTF  ++ GHC +G++ EA  +F++M R G  PD I+ N+LIS   
Sbjct: 488 LLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS 547

Query: 554 KGGMPNEAFRI 564
           + G   +AFR+
Sbjct: 548 RRGDIKDAFRV 558



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 204/411 (49%), Gaps = 1/411 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L +  S  T+N+++  LC+ G     +    +M + G  PN       V     +G+ +A
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEA 274

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +L+  +  ++   +F Y SL++ + KQ   +EA  +F+E  +   +P    +N LI 
Sbjct: 275 ADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID 334

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G    G +  A  +  +M   G SP + TYN+LI  L           ++KE++ K   S
Sbjct: 335 GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG-IS 393

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD +TY  +I+GYC+     KA  +++EM + GIKP+  T+  L+    K   M  A+ +
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            +++ S G LPD + F++LIDG+C N  +    +L  +M    + P+  TF  ++   C+
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E ++ +AR    ++K   + P    +N +I G+ + G++ +A  +  EM +    P  +T
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  L+ G C       A  +  +M+  G  PDD T  +LI  + K  +P+E
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 188/415 (45%), Gaps = 20/415 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T +L+ ++L  + LH+S QVV D++    H L ++  +   +    R      A  LL Q
Sbjct: 65  TPSLISQTL--LNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLRQ 122

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G  T S       +  + +   A      FK          +  F+ LI+    +  
Sbjct: 123 ALGGGTTNS-------IREIFEFLAASRDRLGFK---------SSIVFDYLIKSCCDMNR 166

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +AFE FY M   G  P I T N+L+S   ++N       L  E+ F+      V T+ 
Sbjct: 167 ADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM-FRLRIKSSVYTFN 225

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+  CK GK+ KA      M + G+KP+ VT+N ++ G+   G + +A+ +   M   
Sbjct: 226 IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD  T+ SLI G C+ G+L +  K+ +EM  K L P+   +  LI+  C +  L+ A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             +  ++    + P    YN +I         DEA  ++ E++EK   PD +T+ ILI G
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +C      +A  + ++ML  G  P   T  SL+  L K     EA  + ++ + +
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 151/479 (31%), Positives = 245/479 (51%), Gaps = 14/479 (2%)

Query: 110 SDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLC-E 168
           +++C+       S +  L  +KRL+   + L  +    V+   +    TY  V+ +LC E
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKM----VSKGFHPDVYTYTAVIHALCVE 59

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
             LH++ +   + M +    PN       +    + G+ D A  LLS+ R   V  +   
Sbjct: 60  NRLHEARKF-LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVT 117

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YNSL++ L K   A EA  + +E       PD +T+  LI G  +  +   A   F  + 
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G  PD+VTY+ LI GLC+   +    +L   +       P+ VTY S+ISG+C++GKM
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  +   M   G  P  VT+  L++GF K+  +  A  +  +M   G  PDVVTF+SL
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +DG CR  +L+  + +  EM+ K+ SP VYT+  +++  C+ N+L +AR+F+  L+  D 
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDC 355

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    +N +I G CK     EA  +V E   +RC PD V +T +I G C + ++ EA  
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACR 415

Query: 529 IFNKML-RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS----EDQNLQLPSWKKA 582
           ++ KML   GC P+ IT ++LI+ L   GM + A   +++         NL + +++KA
Sbjct: 416 VYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKA 474



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 208/444 (46%), Gaps = 72/444 (16%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +++L V  RL   +   KFLE    N +L  +  TY +++  LC+ G  D    +   MR
Sbjct: 53  IHALCVENRLHEAR---KFLE-EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR 108

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
               +P +      +S   +A +   A  LL +          F Y +L+    K   +D
Sbjct: 109 KKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTL 302
           +A+ +F++      +PD  T++ LI GL + G +K+A + F  M   G C P+ VTYN+L
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ISG CR+ ++     LL+ +  ++  SPDVVTYT++++G+CKL ++D A  + N+M   G
Sbjct: 228 ISGFCRMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL---- 418
           + P  VTF  L+DG  +   +  A ++   M      P V T+++++DGYCR  QL    
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 419 -----------------------------NQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
                                        ++ ++L +E + +  +P+V  +T +I+ LC+
Sbjct: 347 KFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCR 406

Query: 450 ENRLNDARRFLKQL-----------KWNDL---------------------VPKPFMYNP 477
           E ++++A R  +++            ++ L                     VP    YN 
Sbjct: 407 EKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNL 466

Query: 478 VIDGFCKAGNVDEANVIVAEMEEK 501
           +ID F KA   ++A  ++ +M ++
Sbjct: 467 LIDAFRKANRDEDARELLDDMVQR 490



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TY  ++   C+    D    VF+ + + G  P+       +    + G+   A  L  + 
Sbjct: 152 TYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            + G    +T  YNSL++   +    DEA+ + +      S PD  T+  L+ G  ++  
Sbjct: 212 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 271

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A++    M   G +PD+VT+ +L+ GLCR N ++    +L E++ KS  SP V TY 
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS-CSPTVYTYN 330

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ GYC+  ++++A     E   C   P+ V+FN++I G  KV     A  + E     
Sbjct: 331 TILDGYCRANQLEEARKFMLEEMDC--PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 388

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLK------------------------LC-----DE 427
              PDVV ++++IDG CR  ++++  +                        LC     D 
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDR 448

Query: 428 MKG---KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
            +G   K   PN+ T+ +LI+A  K NR  DAR  L     +D+V + F
Sbjct: 449 ARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELL-----DDMVQRGF 492


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 242/491 (49%), Gaps = 61/491 (12%)

Query: 109 LSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
           LSD  AR LC       ++ ++ RL +PK  L  L+ +    + N   + +  +  S   
Sbjct: 94  LSD--ARTLCL------AIVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDR 145

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           +G   S+  VFDY+               + SC    + D A       +   V  +   
Sbjct: 146 LGFKSSI--VFDYL---------------IKSCCDMNRADEAFECFYTMKEKGVLPTIET 188

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
            NSLL+  +K N  + A  ++ E FRL  +   +TFNI+I  L + G++KKA +F   M 
Sbjct: 189 CNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHME 248

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G  P+IVTYNT++ G C    V     +L  +K + +  PD  TY S+ISG CK G++
Sbjct: 249 TSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK-RQKIEPDSFTYGSLISGMCKQGRL 307

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML-------------- 394
           ++A+ I+ EM   G++PSAV +N LIDGF   GN+  A   ++ ML              
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367

Query: 395 ---------------------SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
                                  G  PD +T++ LI+GYCR     +   L DEM    +
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI 427

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P   T+T L++ L K+NR+ +A    K++    ++P   M+N +IDG C   NV  A  
Sbjct: 428 KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFE 487

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ +M+  +  PD+VTF  ++ GHC +G++ EA  +F++M R G  PD I+ N+LIS   
Sbjct: 488 LLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS 547

Query: 554 KGGMPNEAFRI 564
           + G   +AFR+
Sbjct: 548 RRGDIKDAFRV 558



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 205/411 (49%), Gaps = 1/411 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L +  S  T+N+++  LC+ G     +    +M + G  PN       V     +G+ +A
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEA 274

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +L+  +  ++   +F Y SL++ + KQ   +EA  +F+E  +   +P    +N LI 
Sbjct: 275 ADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID 334

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G    G +  A  +  +M   G SP + TYN+LI  L           ++KE++ K   S
Sbjct: 335 GFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG-IS 393

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD +TY  +I+GYC+     KA  +++EM + GIKP+  T+  L+    K   M  A+ +
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            +++ S G LPDV+ F++LIDG+C N  +    +L  +M    + P+  TF  ++   C+
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E ++ +AR    ++K   + P    +N +I G+ + G++ +A  +  EM +    P  +T
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  L+ G C       A  +  +M+  G  PDD T  +LI  + K  +P+E
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 188/415 (45%), Gaps = 20/415 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T +L+ ++L  + LH+S QVV D++    H L ++  +   +    R      A  LL Q
Sbjct: 65  TPSLISQTL--LNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLKQ 122

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G  T S       +  + +   A      FK          +  F+ LI+    +  
Sbjct: 123 ALGGGTTNS-------IREIFEFLAASRDRLGFK---------SSIVFDYLIKSCCDMNR 166

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +AFE FY M   G  P I T N+L+S   ++N       L  E+ F+      V T+ 
Sbjct: 167 ADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM-FRLRIKSSVYTFN 225

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+  CK GK+ KA      M + G+KP+ VT+N ++ G+   G + +A+ +   M   
Sbjct: 226 IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD  T+ SLI G C+ G+L +  K+ +EM  K L P+   +  LI+  C +  L+ A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             +  ++    + P    YN +I         DEA  ++ E++EK   PD +T+ ILI G
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING 405

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +C      +A  + ++ML  G  P   T  SL+  L K     EA  + ++ + +
Sbjct: 406 YCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE 460


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 245/479 (51%), Gaps = 14/479 (2%)

Query: 110 SDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLC-E 168
           +++C+       S +  L  +KRL+   + L  +    V+   +    TY  V+ +LC E
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKM----VSKGFHPDVYTYTAVIHALCVE 59

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
             LH++ +   + M +    PN       +    + G+ D A  LLS+ R   V  +   
Sbjct: 60  NRLHEARKF-LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVT 117

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YNSL++ L K   A EA  + +E       PD +T+  LI G  +  +   A   F  + 
Sbjct: 118 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G  PD+VTY+ LI GLC+   +    +L   +       P+ VTY S+ISG+C++GKM
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  +   M   G  P  VT+  L++GF K+  +  A  +  +M   G  PDVVTF+SL
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +DG CR  +L+  + +  EM+ K+ SP VYT+  +++  C+ N+L +AR+F+  L+  D 
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDC 355

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    +N +I G CK     EA  +V E   +RC PD V +T +I G C + ++ EA  
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACR 415

Query: 529 IFNKML-RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ----NLQLPSWKKA 582
           ++ KML   GC P+ IT ++L++ L   GM + A   +++         NL + +++KA
Sbjct: 416 VYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKA 474



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 208/444 (46%), Gaps = 72/444 (16%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +++L V  RL   +   KFLE    N +L  +  TY +++  LC+ G  D    +   MR
Sbjct: 53  IHALCVENRLHEAR---KFLE-EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR 108

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
               +P +      +S   +A +   A  LL +          F Y +L+    K   +D
Sbjct: 109 KKC-VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTL 302
           +A+ +F++      +PD  T++ LI GL + G +K+A + F  M   G C P+ VTYN+L
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ISG CR+ ++     LL+ +  ++  SPDVVTYT++++G+CKL ++D A  + N+M   G
Sbjct: 228 ISGFCRMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL---- 418
           + P  VTF  L+DG  +   +  A ++   M      P V T+++++DGYCR  QL    
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 419 -----------------------------NQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
                                        ++ ++L +E + +  +P+V  +T +I+ LC+
Sbjct: 347 KFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCR 406

Query: 450 ENRLNDARRFLKQL-----------KWNDLV---------------------PKPFMYNP 477
           E ++++A R  +++            ++ LV                     P    YN 
Sbjct: 407 EKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNL 466

Query: 478 VIDGFCKAGNVDEANVIVAEMEEK 501
           +ID F KA   ++A  ++ +M ++
Sbjct: 467 LIDAFRKANRDEDARELLDDMVQR 490



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TY  ++   C+    D    VF+ + + G  P+       +    + G+   A  L  + 
Sbjct: 152 TYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            + G    +T  YNSL++   +    DEA+ + +      S PD  T+  L+ G  ++  
Sbjct: 212 IKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR 271

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A++    M   G +PD+VT+ +L+ GLCR N ++    +L E++ KS  SP V TY 
Sbjct: 272 LDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS-CSPTVYTYN 330

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ GYC+  ++++A     E   C   P+ V+FN++I G  KV     A  + E     
Sbjct: 331 TILDGYCRANQLEEARKFMLEEMDC--PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 388

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLK------------------------LC-----DE 427
              PDVV ++++IDG CR  ++++  +                        LC     D 
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDR 448

Query: 428 MKG---KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
            +G   K   PN+ T+ +LI+A  K NR  DAR  L     +D+V + F
Sbjct: 449 ARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELL-----DDMVQRGF 492


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/425 (32%), Positives = 231/425 (54%), Gaps = 8/425 (1%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           + ++N +    F TY  ++  L +   L D+VQV+ + M S  H+P++  +   V S   
Sbjct: 28  YRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQE-MVSARHVPDNTTLTVVVQSLCL 86

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
             + D A+ L+ +     +  +   Y++L++ L K    DEAV + +        P   T
Sbjct: 87  GDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVT 146

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N +I G  R   V +A  F   M + GC PDI+TY  LI G C+  +V RG ELL EV 
Sbjct: 147 YNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +  F+PD+VTY++VI G CK G++  A  I+ EM SC   P+A+T+N LI G+ + G+M
Sbjct: 207 RRG-FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM-SCA--PTAITYNSLIGGYCRAGDM 262

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +  +M+     PDVVT+++L+  +C+ G+L+   +L  +M    LSP+V TFT L
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           ++ LC E R+ DA   L+++      P  + YN V+DG+CKA  V +A  +VA+   +  
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKM-LRIGCAPDDITVNSLI-SCLLKGGMPNEA 561
            P+ VT+ IL+ G C  GR  +A+   +++    G  P  + + ++I   L + G  ++A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442

Query: 562 FRIMQ 566
            +  +
Sbjct: 443 VQFYE 447



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 201/416 (48%), Gaps = 5/416 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N     +N+V+  LC  G       V+  M +D H P+       V    +A +   A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +L +               ++ +L   +  D+A  + +E        +  T++ L+ GL
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +   + +A      M   GC+P +VTYN++I+G CR   V   H  ++++  +    PD
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG-CHPD 178

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           ++TYT++I G+CK   + +   +  E+   G  P  VT++ +IDG  K G +  A  + E
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M      P  +T++SLI GYCR G +++ ++L  +M     +P+V T+T L++A CK  
Sbjct: 239 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           RL+DA    +Q+  N L P    +  ++DG C  G +++A  ++ E+  + C P   T+ 
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ++ G+C   ++ +A  +       G  P+ +T N L++   + G  ++A + + +
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 195/386 (50%), Gaps = 22/386 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC---DAAKGLL 214
           TYN ++   C     D      + M ++G  P+         + +  G C   D  +GL 
Sbjct: 146 TYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD-----IITYTALIGGFCKSRDVGRGLE 200

Query: 215 SQFRPGEVTMSTFM-----YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
                GEVT   F      Y+++++ L K     +AV +F+E   +   P   T+N LI 
Sbjct: 201 LL---GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE---MSCAPTAITYNSLIG 254

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  R G++ +A      M    C+PD+VTY TL+S  C++  +   +EL +++   ++ S
Sbjct: 255 GYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM-VANKLS 313

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDVVT+TS++ G C  G+M+ A  +  E+   G  P+  T+N ++DG+ K   +  AE +
Sbjct: 314 PDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEEL 373

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINAL 447
                S G++P+ VT++ L+ G CR G+ +Q L+  D++  +G     +V  + I+++AL
Sbjct: 374 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 433

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C++ R +DA +F +++     VP    +  V+   CKA    +A+ ++ EM +    P  
Sbjct: 434 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGP 493

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
            T   ++  +C  G + +A  + +++
Sbjct: 494 GTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 5/280 (1%)

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           +P  + +N +I GLCR   +   H L    +      PD +TYT ++ G  K  ++  A 
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLR--HALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +  EM S    P   T  V++        +  A  + E ML  G   + +T+S+L+DG 
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+  +L++ + L + M  +  +P V T+  +I   C+  R+++A  F++Q+      P  
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             Y  +I GFCK+ +V     ++ E+  +   PD VT++ +I G C  GR+ +A+ IF +
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           M    CAP  IT NSLI    + G  +EA R++ +  +D+
Sbjct: 240 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 157/331 (47%), Gaps = 11/331 (3%)

Query: 139 GLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEF 196
           GL+ L E +R   + +    TY+ V+  LC+ G L D+V + F+ M      P +     
Sbjct: 198 GLELLGEVTRRGFTPD--IVTYSTVIDGLCKAGRLRDAVDI-FEEMSC---APTAITYNS 251

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +    RAG  D A  LL +    +       Y +L++A  K    D+A  +F++     
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             PD  TF  L+ GL   G ++ A E   ++   GC P I TYN ++ G C+ N+V +  
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAE 371

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG--IKPSAVTFNVLI 374
           EL+ + + +  F P+ VTY  +++G C+ G+ D+A    +++NS G     S   + +++
Sbjct: 372 ELVADFRSRG-FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 430

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           D   + G    A    E M+  GY+P   TF++++   C+  Q  Q  +L +EM     +
Sbjct: 431 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 490

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKW 465
           P   T   +++A C+   +  A     +L+ 
Sbjct: 491 PGPGTCDAVVSAYCRAGMIQKADELASELRL 521


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 216/409 (52%), Gaps = 4/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+    D    +   M   G  P++      +    +AGK + A  LL+  
Sbjct: 12  TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YN+L++ L KQ N D A  +  E+      PD  T++IL  GL + G +
Sbjct: 72  AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRI 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AFE   +M   GC+P++VTYNTLI GLC+ ++  + +ELL E    S F PDVVTYT 
Sbjct: 132 DEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELL-ETLVSSGFVPDVVTYTI 190

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK G++DKA  +   M   G  PS +T+  L++G  + G +  A ++ + M+S  
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 250

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D + + SL++GYC++ +  +  K+ D ++G   +P +  +  L++  CKE RL++  
Sbjct: 251 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIP 307

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +     VP    YN V+DG CK G VDEA   +  M    C PD V++ I+I G 
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               +  EA  + ++M++ G  PD +T N+L++   K    ++A  I++
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 199/399 (49%), Gaps = 38/399 (9%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           +V    F YN L++ L K +  D+A  M  E       PDT TFN ++ GL + G+ ++A
Sbjct: 5   KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
                 M    C P   TYNTLISGLC+   V R   L+ E    S F PDVVTY+ +  
Sbjct: 65  HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEF-VSSGFVPDVVTYSILAD 123

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G CK G++D+A  +  EM+  G  P+ VT+N LIDG  K      A  + E ++S G++P
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVP 183

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           DVVT++ ++DG C+ G+L++ LK+ + M  +  +P+V T+T L+  LC+  R+++A    
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243

Query: 461 KQLKWNDL--------------------------------VPKPFMYNPVIDGFCKAGNV 488
           K++   D                                  P   +YN ++DG+CK G +
Sbjct: 244 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 303

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           DE   +  +M  + C P+  T+ I++ G C  G++ EA      M   GC PD ++ N +
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363

Query: 549 ISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRT 587
           I  L K   P EA +++     DQ +Q      AV   T
Sbjct: 364 IDGLFKASKPKEARQVL-----DQMIQAGIPPDAVTYNT 397



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 188/412 (45%), Gaps = 4/412 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN +M   C+ G  D +  VF+ M   G +PN       +    + GK D A   L    
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                     YN +++ L K +   EA  +  +  +    PD  T+N L+    +     
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     +M   G  PD VTYNTLISGL + N +   +EL+ E+           TY ++
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I   CK G + +A  + + M   G++ + VT+N+ ID   K G +  A  +   M +   
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT--- 526

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG-KNLSPNVYTFTILINALCKENRLNDAR 457
           L D V+++++I G C+  QL++  KL  EM   K L    +TF +LI+A  K  RL++A 
Sbjct: 527 LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEAL 586

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +      P    YN VI   CK   VD+A  +  EM  +      V++T+LI G 
Sbjct: 587 TLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 646

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           C +GR  EA+ +  +M    C  DD+    L   L   G   EA  +++R +
Sbjct: 647 CGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMT 698



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 198/440 (45%), Gaps = 32/440 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    D  + + D   S G +P+            + G+ D A  L+ + 
Sbjct: 82  TYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   YN+L++ L K +  ++A  + +        PD  T+ I++ GL + G +
Sbjct: 142 SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRL 201

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS----------- 326
            KA +    M   GC+P ++TY  L+ GLCR   V   H + KE+  K            
Sbjct: 202 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 261

Query: 327 --------------------EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
                                 +P +  Y +++ GYCK G++D+   ++ +M   G  P+
Sbjct: 262 VNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 321

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+N+++DG  K G +  A    E M S G +PDVV+++ +IDG  +  +  +  ++ D
Sbjct: 322 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 381

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +M    + P+  T+  L+   CKE R +DA   LK +    + P    YN +I G  +  
Sbjct: 382 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 441

Query: 487 NVDEANVIVAEMEEKRCKPDK-VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
            + +A  ++ EM    C      T+  +I   C +G + +A+ + + M   G   + +T 
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501

Query: 546 NSLISCLLKGGMPNEAFRIM 565
           N  I  L K G  +EA  ++
Sbjct: 502 NIFIDRLCKEGRLDEASSLL 521



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 176/381 (46%), Gaps = 6/381 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + KTYN+VM  LC+ G  D      + M S G +P+       +    +A K   A+ +L
Sbjct: 321 NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 380

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            Q     +      YN+L+    K+   D+AV + K   +    PD  T+N LI GLS+ 
Sbjct: 381 DQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQT 440

Query: 275 GEVKKAFEFFYDMGSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             +  A+E  ++M   GC      TYNT+I  LC+   + +   L+  +        + V
Sbjct: 441 NRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG-VEANTV 499

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY   I   CK G++D+A+ + +EM++       V++  +I G  K   +  A  +   M
Sbjct: 500 TYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREM 556

Query: 394 LSF-GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ++  G      TF+ LID + +  +L++ L L + M  +  SP+V T+ ++I  LCK ++
Sbjct: 557 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++ A     ++    +V     Y  +I G C  G   EA  ++ EM    C+ D +    
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676

Query: 513 LIIGHCMKGRMVEAISIFNKM 533
           L +    +GR  EA  +  +M
Sbjct: 677 LYLALRGQGRGEEAAELLRRM 697



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 35/245 (14%)

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           MN   + P   T+N+LIDG  K      A  M   M+  G  PD VTF+S++DG C+ G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
             +   L   M  +N  P+  T+  LI+ LCK+  ++ A+  + +   +  VP    Y+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCK--------------------------------- 504
           + DG CK G +DEA  +V EM    C                                  
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 505 --PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD VT+TI++ G C +GR+ +A+ +   ML+ GC P  IT  +L+  L + G  +EA 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 563 RIMQR 567
            I + 
Sbjct: 241 HIFKE 245



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 80/142 (56%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  + ++P+V+T+ ILI+ LCK ++ + A   L ++    + P    +N ++DG CKAG 
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            + A+ ++A M E+ C+P   T+  LI G C +  +  A ++ ++ +  G  PD +T + 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 548 LISCLLKGGMPNEAFRIMQRAS 569
           L   L K G  +EAF +++  S
Sbjct: 121 LADGLCKRGRIDEAFELVKEMS 142



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%)

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M E++  PD  T+ ILI G C   +  +A  + ++M+  G  PD +T NS++  L K G 
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 558 PNEAFRIMQRASE 570
              A  ++   +E
Sbjct: 61  FERAHSLLAVMAE 73


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 221/415 (53%), Gaps = 5/415 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC++G +D  + V   M   G  PN+      +    R      A+ +  + 
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      ++SL+  L +  +  +A+  F+E  R    PD   + ILI G  R G +
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGAL 448

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   +M + GC  D+VTYNT ++GLC+    A    L  E+  +    PD  T+T+
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM-VERGMVPDFYTFTT 507

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK G MDKA  ++  M    +KP  VT+N LIDGF K G M  A+ + + M+   
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD +++ ++++G+C +G L + L LCD+M  K + PN+ T   LI   C+   +  A 
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            +L ++  N ++P  F YN +IDG+ K  N+++A +++ EME++  + + +T+ +++ G 
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR----IMQRA 568
           C +G+M EA  +  KM+ IG  PD  T +SLI+  +      EAFR    ++QR 
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 214/437 (48%), Gaps = 5/437 (1%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           K+L       + L    V++S+N      N ++  L   G  D    ++  +   G   N
Sbjct: 201 KKLREGSEAFQILRRKGVSVSINAC----NKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
              +   V++  +  K +     LS      V      YN+L+NA  ++   +EA  +  
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
            +     +P   T+N ++ GL +IG+  +A +   +M   G +P+  TYNTL+  +CR +
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
            +    E+  E+  +    PD+V+++S+I    + G + +A   + EM   GI P  V +
Sbjct: 377 NILEAQEIFDEMSRRGVL-PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
            +LIDGF + G +  A  MR+ ML+ G   DVVT+++ ++G C+         L +EM  
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + + P+ YTFT LI   CK+  ++ A    + +   +L P    YN +IDGFCKAG +  
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +  +M  K   PD +++  ++ G C  G + EA+++ ++ML  G  P+ +T N+LI 
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615

Query: 551 CLLKGGMPNEAFRIMQR 567
              + G   +A+  + +
Sbjct: 616 GYCRSGDMPKAYEYLSK 632



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 182/362 (50%), Gaps = 1/362 (0%)

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           +  V + ++A K           R   V++S    N LL  LV+    D A  ++ E  R
Sbjct: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR 250

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
              + + +T NI++  L +  + +    F  DM   G   DIVTYNTLI+  CR   V  
Sbjct: 251 GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEE 310

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             +LL     +    P ++TY +++ G CK+GK D+A  +  EM   G+ P+A T+N L+
Sbjct: 311 AFQLLNSFSSRG-MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
               +  N++ A+ + + M   G LPD+V+FSSLI    RNG L Q L    EM+   + 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+   +TILI+  C+   L+DA +   ++           YN  ++G CK     +A+++
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             EM E+   PD  TFT LI G+C  G M +A+++F  M+R    PD +T N+LI    K
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549

Query: 555 GG 556
            G
Sbjct: 550 AG 551



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 1/412 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+L++R+  +          F  +R  G   +       +   +R G  D A  +  +  
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
            G + ++ +  N ++NAL K    +  ++   +        D  T+N LI    R G V+
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AF+      S G  P ++TYN ++ GLC++ +  R  ++L E+  +   +P+  TY ++
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM-LQLGLTPNAATYNTL 368

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +   C+   + +A  I++EM+  G+ P  V+F+ LI    + G++  A      M   G 
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +PD V ++ LIDG+CRNG L+  LK+ DEM  +    +V T+   +N LCK+    DA  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++    +VP  + +  +I G+CK GN+D+A  +   M     KPDKVT+  LI G C
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             G M  A  +++ M+R    PD I+  ++++     G+  EA  +  +  E
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 225/414 (54%), Gaps = 1/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+ G       + + M   G  P+       V    RAGK D A  L  + 
Sbjct: 12  TYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +T  YN+L+N L K  N + A  + +E      +PD  T+N ++ GL R+G+V
Sbjct: 72  IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKV 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVTYT 336
            +A +FF  M S G SPD+V YN L+  L +  +VA    L K +     + +PD++TY 
Sbjct: 132 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYN 191

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+C++ K D+A  ++ ++ + G  P  VT+N ++ G  +  NM  AE M ++M+  
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS 251

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+  T+S ++ G+CR G + + L+L +EM  K  SP+V     +I+ LCK  +++DA
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L+++     VP    YN ++DG CK   VD+A+ + + M +  C PD V++++++ G
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            C   ++ +A  +F++M+     PD +T N L+  L K G  +EA  ++   SE
Sbjct: 372 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 217/416 (52%), Gaps = 5/416 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC MG     +  FD M S G+ P+       + +  + GK   A GL    
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176

Query: 218 RPGE--VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
              +  V      YN+L++   +    DEA+ +FK+       PDT T+N ++ GL+R  
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + +A E F  M   GC+P+  TY+ ++SG CRV  +AR  EL +E+  K  FSPDV+  
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK-RFSPDVLLC 295

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +VI   CK  K+D A  +  EM+  G  P  VT+N+L+DG  K   +  A  +   M+ 
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 355

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD+V++S +++G C+  +++    L D M  + L P+V TF IL++ LCK  +L++
Sbjct: 356 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 415

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+  L  +  ++++P       ++ G C+    DEA  +   M EK    D +   I++ 
Sbjct: 416 AKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLA 475

Query: 516 GHCMKGRMVEAISIFNKMLRIGC--APDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           G C +G++ +A+  F  M++     +PD +T  +L++ L++ G  ++A    Q+ +
Sbjct: 476 GLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT 531



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 170/346 (49%), Gaps = 3/346 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  L      D  + +F  M   G  PN       +S   R G       L  + 
Sbjct: 224 TYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM 283

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N++++ L K    D+A  + +E  ++ + PD  T+NIL+ GL +   V
Sbjct: 284 TEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 343

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E F  M   GC+PDIV+Y+ +++GLC+ N+V     L   +  + +  PDVVT+  
Sbjct: 344 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM-IERKLVPDVVTFNI 402

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK GK+D+A  + + M+   + P  VT   L+ G  +      A  + + M+  G
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN--LSPNVYTFTILINALCKENRLND 455
            + DV+  + ++ G CR G+L Q L     M   +   SP+V T+T L+NAL +  R++ 
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           A  + +Q+  +   P    YN +++G  K G   +A+ +   M+EK
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 132/242 (54%), Gaps = 2/242 (0%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F PDVVTY+++ISG CK GK+ +A  +  EM   G+ P   T+ +++D   + G +  A+
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +M+  G   + V +++LI+G C++  + +  KL +EM  K   P+  T+  +++ L
Sbjct: 66  ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI--VAEMEEKRCKP 505
           C+  ++++A++F   +      P    YN ++D   K G V EA  +    +M +++  P
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D +T+  LI G C   +  EA+ +F  ++  G  PD +T NS++  L +    +EA  + 
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245

Query: 566 QR 567
           ++
Sbjct: 246 KK 247



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G+ PDVVT+S++I G C+ G++ + L++ +EM  K ++P+V T+TI+++ LC+  +
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A     ++           YN +I+G CK  N++ A  ++ EM  K  +PD +T+  
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRAS 569
           ++ G C  G++ EA   F+ M   G +PD +  N L+  L K G   EA   F+ M  A 
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 1/245 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+  L D    +F  M  +G  P+       ++   +  K   A+ L  + 
Sbjct: 329 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 388

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++      +N L++ L K    DEA  +          PD  T   L+ GL R    
Sbjct: 389 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRT 448

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYT 336
            +A   F  M   G   D++ +N +++GLCR  ++A+     K  VK   EFSPDVVTYT
Sbjct: 449 DEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYT 508

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++++   + G++D+A   + +M   G  P  V +N L++G  K G  + A+ + + M   
Sbjct: 509 TLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568

Query: 397 GYLPD 401
           G+L D
Sbjct: 569 GFLSD 573



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 2/211 (0%)

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G +P  VT++ +I G  K G +  A  M E M   G  PDV T++ ++D  CR G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +++  +L  +M  +  S N   +  LIN LCK+  +  A + L+++      P    YN 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++ G C+ G V EA      M  +   PD V +  L+     +G++ EA  +F  M    
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 538 --CAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              APD IT N+LI    +    +EA ++ +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFK 211


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 221/415 (53%), Gaps = 5/415 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC++G +D  + V   M   G  PN+      +    R      A+ +  + 
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      ++SL+  L +  +  +A+  F+E  R    PD   + ILI G  R G +
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGAL 448

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   +M + GC  D+VTYNT ++GLC+    A    L  E+  +    PD  T+T+
Sbjct: 449 SDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM-VERGMVPDFYTFTT 507

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK G MDKA  ++  M    +KP  VT+N LIDGF K G M  A+ + + M+   
Sbjct: 508 LIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD 567

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD +++ ++++G+C +G L + L LCD+M  K + PN+ T   LI   C+   +  A 
Sbjct: 568 IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAY 627

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            +L ++  N ++P  F YN +IDG+ K  N+++A +++ EME++  + + +T+ +++ G 
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR----IMQRA 568
           C +G+M EA  +  KM+ IG  PD  T +SLI+  +      EAFR    ++QR 
Sbjct: 688 CAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 214/437 (48%), Gaps = 5/437 (1%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           K+L       + L    V++S+N      N ++  L   G  D    ++  +   G   N
Sbjct: 201 KKLREGSEAFQILRRKGVSVSINAC----NKLLGGLVRTGWVDLAWEIYGEVVRGGIELN 256

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
              +   V++  +  K +     LS      V      YN+L+NA  ++   +EA  +  
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
            +     +P   T+N ++ GL +IG+  +A +   +M   G +P+  TYNTL+  +CR +
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRD 376

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
            +    E+  E+  +    PD+V+++S+I    + G + +A   + EM   GI P  V +
Sbjct: 377 NILEAQEIFDEMSRRGVL-PDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
            +LIDGF + G +  A  MR+ ML+ G   DVVT+++ ++G C+         L +EM  
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + + P+ YTFT LI   CK+  ++ A    + +   +L P    YN +IDGFCKAG +  
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +  +M  K   PD +++  ++ G C  G + EA+++ ++ML  G  P+ +T N+LI 
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615

Query: 551 CLLKGGMPNEAFRIMQR 567
              + G   +A+  + +
Sbjct: 616 GYCRSGDMPKAYEYLSK 632



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 182/362 (50%), Gaps = 1/362 (0%)

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           +  V + ++A K           R   V++S    N LL  LV+    D A  ++ E  R
Sbjct: 191 DLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR 250

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
              + + +T NI++  L +  + +    F  DM   G   DIVTYNTLI+  CR   V  
Sbjct: 251 GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEE 310

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             +LL     +    P ++TY +++ G CK+GK D+A  +  EM   G+ P+A T+N L+
Sbjct: 311 AFQLLNSFSSRG-MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
               +  N++ A+ + + M   G LPD+V+FSSLI    RNG L Q L    EM+   + 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+   +TILI+  C+   L+DA +   ++           YN  ++G CK     +A+++
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             EM E+   PD  TFT LI G+C  G M +A+++F  M+R    PD +T N+LI    K
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549

Query: 555 GG 556
            G
Sbjct: 550 AG 551



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 1/412 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+L++R+  +          F  +R  G   +       +   +R G  D A  +  +  
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
            G + ++ +  N ++NAL K    +  ++   +        D  T+N LI    R G V+
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AF+      S G  P ++TYN ++ GLC++ +  R  ++L E+  +   +P+  TY ++
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM-LQLGLTPNAATYNTL 368

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +   C+   + +A  I++EM+  G+ P  V+F+ LI    + G++  A      M   G 
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +PD V ++ LIDG+CRNG L+  LK+ DEM  +    +V T+   +N LCK+    DA  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++    +VP  + +  +I G+CK GN+D+A  +   M     KPDKVT+  LI G C
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             G M  A  +++ M+R    PD I+  ++++     G+  EA  +  +  E
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 234/436 (53%), Gaps = 20/436 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN+++R+LC  G L ++V VV D MR  G  PN+      V++  RAG+ D A+ ++S 
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGD-MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSL 212

Query: 217 FRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            R  G    +   +NS++N L K    + A  +F E  R    PD  ++N L+ G  ++G
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + ++   F +M   G  PD+VT+ +LI   C+   + +   L+ +++ +     + VT+
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG-LRMNEVTF 331

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+CK G +D A     EM  CGI+PS V +N LI+G+ K+G M  A  +   M +
Sbjct: 332 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 391

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               PDVVT+S++I GYC+ G L+   +L  +M  K + P+  T++ LI  LC+E RLND
Sbjct: 392 KRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLND 451

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    + +    + P  F Y  +IDG CK GNV++A  +  EM  K   PD VT+++LI 
Sbjct: 452 ACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 511

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC-----------LLKG----GMPNE 560
           G     R  EA  +  K+      PD+I  ++L+ C           LLKG    G+  E
Sbjct: 512 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 571

Query: 561 AFRIMQRASEDQNLQL 576
           A ++ Q +  D+N +L
Sbjct: 572 ADKVYQ-SMLDRNWKL 586



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 192/338 (56%), Gaps = 1/338 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN++L AL    +   A        R    P+ +T+NIL++ L   G +++A     DM 
Sbjct: 121 YNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             GC+P+ VTYNTL++  CR  E+     ++  ++ +    P++VT+ S+++G CK G+M
Sbjct: 180 GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A  +++EM   G+ P  V++N L+ G+ KVG +  +  +   M   G +PDVVTF+SL
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I   C+ G L Q + L  +M+ + L  N  TFT LI+  CK+  L+DA   +++++   +
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I+G+CK G +D A  ++ EME KR KPD VT++ +I G+C  G +  A  
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  KML+ G  PD IT +SLI  L +    N+A  + +
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 202/380 (53%), Gaps = 3/380 (0%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G+ P+ P     + +   A    A + L S  R G V  + + YN L+ AL  +   +EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLSSMLRHG-VAPNVYTYNILVRALCARGRLEEA 171

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLIS 304
           V +  +       P+  T+N L+    R GE+  A      M   G   P++VT+N++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+   +    ++  E+  +   +PDVV+Y +++SGYCK+G + ++  +++EM   G+ 
Sbjct: 232 GLCKAGRMEGARKVFDEM-VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  VTF  LI    K GN+  A  +  +M   G   + VTF++LIDG+C+ G L+  L  
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +EM+   + P+V  +  LIN  CK  R++ AR  +++++   + P    Y+ +I G+CK
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            GN+D A  +  +M +K   PD +T++ LI G C + R+ +A  +F  ML++G  PD+ T
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470

Query: 545 VNSLISCLLKGGMPNEAFRI 564
             +LI    K G   +A  +
Sbjct: 471 YTTLIDGHCKEGNVEKALSL 490



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 193/436 (44%), Gaps = 57/436 (13%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN ++   C++G LH+S+  VF  M   G +P+       + +  +AG  + A  L++Q
Sbjct: 260 SYNTLLSGYCKVGCLHESL-AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   + M+   + +L++   K+   D+A+   +E  +   QP    +N LI G  ++G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A E   +M +    PD+VTY+T+ISG C+V  +    +L +++  K    PD +TY+
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKKGVLPDAITYS 437

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I G C+  +++ A  ++  M   G++P   T+  LIDG  K GN+  A  + + M+  
Sbjct: 438 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497

Query: 397 GYLPDVVTFSSLIDG--------------------------------------------- 411
           G LPDVVT+S LI+G                                             
Sbjct: 498 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVV 557

Query: 412 -----YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
                +C  G + +  K+   M  +N   +   ++ILI+  C+   +  A  F KQ+  +
Sbjct: 558 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP--DKVTFTILIIGHCMKGRMV 524
              P       ++ G  + G V EA+  + ++    C P  D      LI  +  +G + 
Sbjct: 618 GFSPNSTSTISLVRGLFEEGMVVEADNAIQDL--LTCCPLADAEASKALIDLNRKEGNVD 675

Query: 525 EAISIFNKMLRIGCAP 540
             I +   M R G  P
Sbjct: 676 ALIDVLCGMARDGLLP 691



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN V+     A ++  A   ++ M      P+  T+ IL+   C +GR+ EA+ +
Sbjct: 116 PSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
              M   GCAP+ +T N+L++   + G  + A R++    E+ N
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGN 218


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 234/436 (53%), Gaps = 20/436 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN+++R+LC  G L ++V VV D MR  G  PN+      V++  RAG+ D A+ ++S 
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGD-MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSL 212

Query: 217 FRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            R  G    +   +NS++N L K    + A  +F E  R    PD  ++N L+ G  ++G
Sbjct: 213 MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + ++   F +M   G  PD+VT+ +LI   C+   + +   L+ +++ +     + VT+
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG-LRMNEVTF 331

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+CK G +D A     EM  CGI+PS V +N LI+G+ K+G M  A  +   M +
Sbjct: 332 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 391

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               PDVVT+S++I GYC+ G L+   +L  +M  K + P+  T++ LI  LC+E RLND
Sbjct: 392 KRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLND 451

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    + +    + P  F Y  +IDG CK GNV++A  +  EM  K   PD VT+++LI 
Sbjct: 452 ACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 511

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC-----------LLKG----GMPNE 560
           G     R  EA  +  K+      PD+I  ++L+ C           LLKG    G+  E
Sbjct: 512 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 571

Query: 561 AFRIMQRASEDQNLQL 576
           A ++ Q +  D+N +L
Sbjct: 572 ADKVYQ-SMLDRNWKL 586



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 118/338 (34%), Positives = 192/338 (56%), Gaps = 1/338 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN++L AL    +   A        R    P+ +T+NIL++ L   G +++A     DM 
Sbjct: 121 YNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR 179

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             GC+P+ VTYNTL++  CR  E+     ++  ++ +    P++VT+ S+++G CK G+M
Sbjct: 180 GAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRM 239

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A  +++EM   G+ P  V++N L+ G+ KVG +  +  +   M   G +PDVVTF+SL
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I   C+ G L Q + L  +M+ + L  N  TFT LI+  CK+  L+DA   +++++   +
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I+G+CK G +D A  ++ EME KR KPD VT++ +I G+C  G +  A  
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  KML+ G  PD IT +SLI  L +    N+A  + +
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 202/380 (53%), Gaps = 3/380 (0%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G+ P+ P     + +   A    A + L S  R G V  + + YN L+ AL  +   +EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLSSMLRHG-VAPNVYTYNILVRALCARGRLEEA 171

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLIS 304
           V +  +       P+  T+N L+    R GE+  A      M   G   P++VT+N++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+   +    ++  E+  +   +PDVV+Y +++SGYCK+G + ++  +++EM   G+ 
Sbjct: 232 GLCKAGRMEGARKVFDEM-VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  VTF  LI    K GN+  A  +  +M   G   + VTF++LIDG+C+ G L+  L  
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +EM+   + P+V  +  LIN  CK  R++ AR  +++++   + P    Y+ +I G+CK
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            GN+D A  +  +M +K   PD +T++ LI G C + R+ +A  +F  ML++G  PD+ T
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470

Query: 545 VNSLISCLLKGGMPNEAFRI 564
             +LI    K G   +A  +
Sbjct: 471 YTTLIDGHCKEGNVEKALSL 490



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 178/392 (45%), Gaps = 53/392 (13%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN ++   C++G LH+S+  VF  M   G +P+       + +  +AG  + A  L++Q
Sbjct: 260 SYNTLLSGYCKVGCLHESL-AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   + M+   + +L++   K+   D+A+   +E  +   QP    +N LI G  ++G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A E   +M +    PD+VTY+T+ISG C+V  +    +L +++  K    PD +TY+
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKKGVLPDAITYS 437

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I G C+  +++ A  ++  M   G++P   T+  LIDG  K GN+  A  + + M+  
Sbjct: 438 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497

Query: 397 GYLPDVVTFSSLIDG--------------------------------------------- 411
           G LPDVVT+S LI+G                                             
Sbjct: 498 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVV 557

Query: 412 -----YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
                +C  G + +  K+   M  +N   +   ++ILI+  C+   +  A  F KQ+  +
Sbjct: 558 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
              P       ++ G  + G V EA+  + ++
Sbjct: 618 GFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN V+     A ++  A   ++ M      P+  T+ IL+   C +GR+ EA+ +
Sbjct: 116 PSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
              M   GCAP+ +T N+L++   + G  + A R++    E+ N
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGN 218


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 234/436 (53%), Gaps = 20/436 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN+++R+LC  G L ++V VV D MR  G  PN+      V++  RAG+ D A+ ++S 
Sbjct: 12  TYNILVRALCARGRLEEAVGVVGD-MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSL 70

Query: 217 FRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            R  G    +   +NS++N L K    + A  +F E  R    PD  ++N L+ G  ++G
Sbjct: 71  MREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 130

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + ++   F +M   G  PD+VT+ +LI   C+   + +   L+ +++ +     + VT+
Sbjct: 131 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG-LRMNEVTF 189

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+CK G +D A     EM  CGI+PS V +N LI+G+ K+G M  A  +   M +
Sbjct: 190 TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA 249

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               PDVVT+S++I GYC+ G L+   +L  +M  K + P+  T++ LI  LC+E RLND
Sbjct: 250 KRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLND 309

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    + +    + P  F Y  +IDG CK GNV++A  +  EM  K   PD VT+++LI 
Sbjct: 310 ACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN 369

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC-----------LLKG----GMPNE 560
           G     R  EA  +  K+      PD+I  ++L+ C           LLKG    G+  E
Sbjct: 370 GLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 429

Query: 561 AFRIMQRASEDQNLQL 576
           A ++ Q +  D+N +L
Sbjct: 430 ADKVYQ-SMLDRNWKL 444



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 182/308 (59%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+ +T+NIL++ L   G +++A     DM   GC+P+ VTYNTL++  CR  E+     +
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +  ++ +    P++VT+ S+++G CK G+M+ A  +++EM   G+ P  V++N L+ G+ 
Sbjct: 68  VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           KVG +  +  +   M   G +PDVVTF+SLI   C+ G L Q + L  +M+ + L  N  
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TFT LI+  CK+  L+DA   +++++   + P    YN +I+G+CK G +D A  ++ EM
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           E KR KPD VT++ +I G+C  G +  A  +  KML+ G  PD IT +SLI  L +    
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 559 NEAFRIMQ 566
           N+A  + +
Sbjct: 308 NDACELFE 315



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 188/344 (54%), Gaps = 2/344 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V  + + YN L+ AL  +   +EAV +  +       P+  T+N L+    R GE+  A 
Sbjct: 6   VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65

Query: 282 EFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
                M   G   P++VT+N++++GLC+   +    ++  E+  +   +PDVV+Y +++S
Sbjct: 66  RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNTLLS 124

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           GYCK+G + ++  +++EM   G+ P  VTF  LI    K GN+  A  +  +M   G   
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           + VTF++LIDG+C+ G L+  L   +EM+   + P+V  +  LIN  CK  R++ AR  +
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           ++++   + P    Y+ +I G+CK GN+D A  +  +M +K   PD +T++ LI G C +
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            R+ +A  +F  ML++G  PD+ T  +LI    K G   +A  +
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 348



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 193/436 (44%), Gaps = 57/436 (13%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN ++   C++G LH+S+  VF  M   G +P+       + +  +AG  + A  L++Q
Sbjct: 118 SYNTLLSGYCKVGCLHESL-AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   + M+   + +L++   K+   D+A+   +E  +   QP    +N LI G  ++G 
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A E   +M +    PD+VTY+T+ISG C+V  +    +L +++  K    PD +TY+
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKKGVLPDAITYS 295

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I G C+  +++ A  ++  M   G++P   T+  LIDG  K GN+  A  + + M+  
Sbjct: 296 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 355

Query: 397 GYLPDVVTFSSLIDG--------------------------------------------- 411
           G LPDVVT+S LI+G                                             
Sbjct: 356 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVV 415

Query: 412 -----YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
                +C  G + +  K+   M  +N   +   ++ILI+  C+   +  A  F KQ+  +
Sbjct: 416 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 475

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP--DKVTFTILIIGHCMKGRMV 524
              P       ++ G  + G V EA+  + ++    C P  D      LI  +  +G + 
Sbjct: 476 GFSPNSTSTISLVRGLFEEGMVVEADNAIQDL--LTCCPLADAEASKALIDLNRKEGNVD 533

Query: 525 EAISIFNKMLRIGCAP 540
             I +   M R G  P
Sbjct: 534 ALIDVLCGMARDGLLP 549



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 96/179 (53%), Gaps = 1/179 (0%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G  P+V T++ L+   C  G+L + + +  +M+G   +PN  T+  L+ A C+   
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 453 LNDARRFLKQLK-WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           L+ A R +  ++   +  P    +N +++G CKAG ++ A  +  EM  +   PD V++ 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            L+ G+C  G + E++++F++M + G  PD +T  SLI    K G   +A  ++ +  E
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P+  T+ IL+   C +GR+ EA+ +   M   GCAP+ +T N+L++   + G  + A R+
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 565 MQRASEDQN 573
           +    E+ N
Sbjct: 68  VSLMREEGN 76


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/415 (33%), Positives = 215/415 (51%), Gaps = 13/415 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC------DAAK 211
           TYN ++   C++G  D   V+F+ M     L NS   + F  + +  G C      D AK
Sbjct: 273 TYNTLINGFCKLGNMDEAVVLFNQM-----LENSCSPDVFTYNILIDGYCKQERPQDGAK 327

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L    + G    +   YN+L+++LVK     +A  + +   R   +P  +TFN++I   
Sbjct: 328 LLQEMVKYG-CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            ++G++  A+E F  M   GC PDI TYN +ISG CR N +    +LL+ +  ++   PD
Sbjct: 387 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT-EAGCPPD 445

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTY S++SG CK  ++D+A  +Y  + + G     VT + LIDG  K   +  AE +  
Sbjct: 446 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR 505

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M   G  PDVV ++ LI G+C+  QL++ L    EM  K   P V T++I+I+ LCK  
Sbjct: 506 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+ D    LK +    + P   +Y  VIDG CK+ + DEA  +   M++  C P  VT+ 
Sbjct: 566 RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYN 625

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +L+   C   R+ EAI +   M   GC PD +T NS+     K    ++AFR+ Q
Sbjct: 626 VLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQ 680



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 210/428 (49%), Gaps = 20/428 (4%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           G+ + + ++  L +  S + + L  R LCE G +    VV   ++    L  +  ++FF 
Sbjct: 63  GIFYAQAAKEFLRVLDSSEDFELASRRLCEFGGYLVPSVVGRVLQQLDDLDKA--VKFF- 119

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
                    D   G     +PG    S F  N LL+A V++  A EA  +FK +      
Sbjct: 120 ---------DWCTG-----QPG-YKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCS 164

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD+ T++ LI G  +  + ++A+    +M   G  P    YNT+I GLC    V     L
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA--L 222

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +     +   +P V+TYT ++   CK  ++  A+ I  +M   G  P+ VT+N LI+GF 
Sbjct: 223 VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K+GNM  A  +  +ML     PDV T++ LIDGYC+  +   G KL  EM      PN  
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  L+++L K  +  DA    + +   D  P  F +N +ID FCK G +D A  +   M
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 402

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            ++ C PD  T+ I+I G C   R+ +A  +  +M   GC PD +T NS++S L K    
Sbjct: 403 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 462

Query: 559 NEAFRIMQ 566
           +EA+ + +
Sbjct: 463 DEAYEVYE 470



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 208/448 (46%), Gaps = 37/448 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN +++ LC+ G  DS  V +  M+ +   P+       V +  ++ +   A  +L    
Sbjct: 205 YNTIIKGLCDNGRVDSALVHYRDMQRNCA-PSVITYTILVDALCKSARISDASLILEDMI 263

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   YN+L+N   K  N DEAV +F +       PD +T+NILI G  +    +
Sbjct: 264 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 323

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGL-------------------------------- 306
              +   +M  +GC P+ +TYNTL+  L                                
Sbjct: 324 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 383

Query: 307 ---CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
              C+V ++   +EL + +  +    PD+ TY  +ISG C+  ++D A  +   M   G 
Sbjct: 384 DMFCKVGQLDLAYELFQLMTDRGCL-PDIYTYNIMISGACRANRIDDARQLLERMTEAGC 442

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P  VT+N ++ G  K   +  A  + E + + GY  DVVT S+LIDG C++ +L+   K
Sbjct: 443 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK 502

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM+    +P+V  +TILI+  CK ++L+ +  F  ++     VP    Y+ VID  C
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 562

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K+  V +  +++  M E+   PD + +T +I G C      EA  ++  M + GCAP  +
Sbjct: 563 KSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVV 622

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASED 571
           T N L+  L K    +EA  +++    D
Sbjct: 623 TYNVLVDKLCKVSRLDEAIHLLEVMESD 650



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 212/414 (51%), Gaps = 10/414 (2%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH-DSVQVVFDYMRSD---GH 187
           + + P+ G K L+   V      +F TYN +M SL + G + D+  +    +R D    H
Sbjct: 318 KQERPQDGAKLLQ-EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 376

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
              + MI+ F     + G+ D A  L             + YN +++   + N  D+A  
Sbjct: 377 FTFNLMIDMFC----KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 432

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           + +        PD  T+N ++ GL +  +V +A+E +  + + G   D+VT +TLI GLC
Sbjct: 433 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 492

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +   +    +LL+E++ ++  +PDVV YT +I G+CK  ++DK+   ++EM   G  P+ 
Sbjct: 493 KSRRLDDAEKLLREME-RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           +T++++ID   K   +     + + ML  G  PD + ++S+IDG C++   ++  +L   
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKL 611

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           MK    +P V T+ +L++ LCK +RL++A   L+ ++ +  +P    YN V DGF K+  
Sbjct: 612 MKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE 671

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            D+A  +   M+ + C P    +++L+     + +M +A+ I+ + L  G   D
Sbjct: 672 HDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score = 39.7 bits (91), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 53/144 (36%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  V+  LC+   +D    ++  M+  G  P        V    +  + D A  LL    
Sbjct: 589 YTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVME 648

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                  T  YNS+ +   K    D+A  +F+        P  + +++L+  L    ++ 
Sbjct: 649 SDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMD 708

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTL 302
           +A E + +    G   D     TL
Sbjct: 709 QAMEIWEEALEAGADVDPEISRTL 732


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 234/454 (51%), Gaps = 71/454 (15%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   ++EF  F+ S  +  +  +A  L +Q     VT + +  N L+N L + ++ D AV
Sbjct: 92  PRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAV 151

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  + F+L  QPD  TFN LI GL   G++K+A   F +M   G  P++++YNT+I+GL
Sbjct: 152 SVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGL 211

Query: 307 CR-----------------------------VNEVARGHELLKEVKFKSE-----FSPDV 332
           C+                             ++ + +   + + V+F SE       PDV
Sbjct: 212 CKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDV 271

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY +++ G+C LG++++AT ++ EM    + P  VTFN+L+DG  K G +  A  + E 
Sbjct: 272 VTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSET 331

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  P+  T+++L+DGYC + Q+++ +K+   M GK  +PN+ ++ ILIN  CK  R
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPV---------------------------------- 478
           +N+A+R L ++   +L P    Y+ +                                  
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451

Query: 479 -IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            +DGFCK G++DEA  ++ EM E+R KP+ + +TILI G  + G++  A  +F+K+   G
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             PD  T N +I  LLK G+ +EA+   ++  +D
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDD 545



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 180/328 (54%), Gaps = 1/328 (0%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D+A+  F    R+  +P    F   +  +++  +   A      M  FG + ++ + N L
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+ LCR++ V     ++ ++ FK    PD +T+ ++I+G C  GK+ +A G++NEM   G
Sbjct: 138 INCLCRLSHVDFAVSVMGKM-FKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +P+ +++N +I+G  K GN + A  +  +M      P+VVT++++ID  C++  +N+ +
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +   EM  + + P+V T+  +++  C   +LN+A R  K++   +++P    +N ++DG 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G V EA  +   M EK  +P+  T+  L+ G+C+  +M EAI +   M+  GCAP+ 
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
            + N LI+   K    NEA R++   SE
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSE 404



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 191/392 (48%), Gaps = 1/392 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+  LC+ G       VF  M  +   PN       + S  +    + A   LS+ 
Sbjct: 203 SYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEM 262

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      YN++L+        +EA  +FKE       PDT TFNIL+ GL + G V
Sbjct: 263 VDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMV 322

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G  P+  TYN L+ G C  N++    ++L  +      +P++ +Y  
Sbjct: 323 SEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG-IMIGKGCAPNLSSYNI 381

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  +M++A  + +EM+   + P  VT++ L+ G  +VG    A  + + M S G
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD++ +S L+DG+C++G L++ LKL  EM  + + PN+  +TILI  +    +L  A+
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +L  + + P  + YN +I G  K G  DEA     +ME+    PD  ++ ++I G 
Sbjct: 502 ELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGF 561

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
                   AI + ++M+    + D  T   L+
Sbjct: 562 LQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 193/408 (47%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC  G       +F+ M   GH PN       ++   + G    A  +  + 
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+++++L K    +EAV    E       PD  T+N ++ G   +G++
Sbjct: 228 EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQL 287

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M      PD VT+N L+ GLC+   V+     + E   +    P+  TY +
Sbjct: 288 NEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA-RCVSETMTEKGAEPNAYTYNA 346

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC   +MD+A  +   M   G  P+  ++N+LI+G+ K   M  A+ +   M    
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+S+L+ G C+ G+  + L L  EM    L P++  ++IL++  CK   L++A 
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + LK++    + P   +Y  +I G   AG ++ A  + +++     +PD  T+ ++I G 
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +G   EA   F KM   G  PD  + N +I   L+    + A +++
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLI 574



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 146/288 (50%), Gaps = 1/288 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC+ G+    + V + M   G  PN+      +       + D A  +L   
Sbjct: 308 TFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIM 367

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN L+N   K    +EA  +  E       PDT T++ L+QGL ++G  
Sbjct: 368 IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRP 427

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F +M S G  PD++ Y+ L+ G C+   +    +LLKE+  +    P+++ YT 
Sbjct: 428 REALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH-ERRIKPNIILYTI 486

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G    GK++ A  +++++++ GI+P   T+NV+I G  K G    A     +M   G
Sbjct: 487 LIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG 546

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           +LPD  +++ +I G+ +N   +  ++L DEM GK  S +  TF +L++
Sbjct: 547 FLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 2/221 (0%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A   +  M     +PS V F   +    K     SA  +  +M  FG   +V + + 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+  CR   ++  + +  +M    + P+  TF  LIN LC E ++ +A     ++ W+ 
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV-EA 526
             P    YN VI+G CK GN   A  +  +ME+ R KP+ VT+  +I   C K R+V EA
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLC-KDRLVNEA 255

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   ++M+  G  PD +T N+++      G  NEA R+ + 
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKE 296



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 35/181 (19%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RM+     P VV F   +    +  Q +  + LC++M    ++ NVY+  +LIN LC   
Sbjct: 86  RMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLC--- 142

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
                                           +  +VD A  ++ +M +   +PD +TF 
Sbjct: 143 --------------------------------RLSHVDFAVSVMGKMFKLGIQPDAITFN 170

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI G C +G++ EA+ +FN+M+  G  P+ I+ N++I+ L K G    A R+ ++  ++
Sbjct: 171 TLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQN 230

Query: 572 Q 572
           +
Sbjct: 231 R 231


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 224/407 (55%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +L + G  +  Q++F+ +++    P+       ++S  RAGK +AA  ++++ 
Sbjct: 11  TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      + + YN+L++ L K    DEA+ +  E       PD  T+N LI  L + G +
Sbjct: 71  QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF  F +M   GC PD  TYN+LI GL +V    +  ELL+E++ +    PDV+TY+S
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEME-RHGCPPDVMTYSS 189

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G  K G+  KA  ++ EM   G KP ++TF  L+D  GK G +  A  + + M   G
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT+++LI G+ + G L +   L DEMK     P+V T++ LI  L K ++L++A 
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + LK+++     P    YN +I+G  KAG +++A  +   M+ K C PD VT++ LI   
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
               R+  A  +F +M  +G  PD  T  S+I+ L K G  ++A R+
Sbjct: 370 GKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRL 416



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 219/413 (53%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ ++ SL   G  ++   V   M++ G  PN       V    +AG+ D A  LL++ 
Sbjct: 46  SYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM 105

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN L++ L K     EA  +F E       PDT+T+N LI GL ++G  
Sbjct: 106 RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRS 165

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA E   +M   GC PD++TY++LI+GL +  E  +  +L +E+K +    PD +T+T+
Sbjct: 166 QKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR-KPDSITFTA 224

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++    K G++D A  + +EM   G+KP  VT+N LI GFGKVG++V A  + + M   G
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+S LI G  +  QL++  ++  +M+ +   P+  T+  LIN L K   LNDA 
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R   ++K     P    Y+ +I    KA  V+ A V+  EME    +PD  T+  +I   
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              G++ +A  +F++M   G +PD IT N+ ++ L +GG   EA +I +   E
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKE 457



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 189/339 (55%), Gaps = 1/339 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YNSLLNAL K    +EA  +F+E       PD  +++ LI  L R G+ + A E   +M 
Sbjct: 12  YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + GC P++ TYNTL+  L +  +      LL E++  +   PDV TY  +IS   K G++
Sbjct: 72  AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR-DNGCVPDVRTYNCLISTLGKAGRL 130

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  ++ EM   G  P   T+N LI G GKVG    A  + E M   G  PDV+T+SSL
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G  ++G+  +  KL  EMK +   P+  TFT L++AL K  R++DA   L ++K   +
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I GF K G++ EA  ++ EM+   CKPD VT++ LI G     ++ EA  
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  KM + GC PD IT N+LI+ L K G+ N+A R+  R
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/413 (32%), Positives = 211/413 (51%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  L + G  D    +   MR +G +P+       +S+  +AG+   A  L ++ 
Sbjct: 81  TYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM 140

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R       TF YNSL+  L K   + +A+ + +E  R    PD  T++ LI GL + GE 
Sbjct: 141 RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGET 200

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF+ F +M   G  PD +T+  L+  L +   V    ELL E+K +    P VVTY +
Sbjct: 201 VKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG-VKPGVVTYNA 259

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+ K+G + +A  + +EM   G KP  VT++ LI G  K   +  A  + ++M   G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +T+++LI+G  + G LN   +L D MK K  +P+V T++ LI AL K  R+  A 
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              ++++   + P  F Y  +I    KAG VD+A+ + +EM  K   PD +T+   +   
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              GR  EA  IF  M   G  PD  T ++L+  L K    ++A  +++   E
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIE 492



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 206/413 (49%), Gaps = 1/413 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN ++ +L + G       +F  MR  G +P++      +    + G+   A  LL +
Sbjct: 115 RTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEE 174

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                       Y+SL+  L K     +A  +F+E  R   +PD+ TF  L+  L + G 
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A E   +M   G  P +VTYN LI+G  +V ++   + LL E+K ++   PDVVTY+
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK-RNGCKPDVVTYS 293

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G  K  ++D+A  +  +M   G  P  +T+N LI+G GK G +  A  + +RM S 
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDVVT+S+LI    +  ++     L +EM+   + P+++T+  +I  L K  +++DA
Sbjct: 354 GCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDA 413

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R   +++   L P    YN  ++   + G   EA  I  +M+E    PD  T+  L++G
Sbjct: 414 DRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLG 473

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
                 + +A  +  +++  GCA D +  +  +  L   G  +EA  ++Q A+
Sbjct: 474 LSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFAN 526



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 192/366 (52%), Gaps = 1/366 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       +++  +AG+C+ A+ L  + +  + T     Y+ L+N+L +    + A+ +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
             E      +P+ WT+N L+  L + G+  +A     +M   GC PD+ TYN LIS L +
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              ++    L  E++ +    PD  TY S+I G  K+G+  KA  +  EM   G  P  +
Sbjct: 127 AGRLSEAFTLFAEMRERG-CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T++ LI G GK G  V A  + + M   G  PD +TF++L+D   + G+++  L+L DEM
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           K + + P V T+  LI    K   L +A   L ++K N   P    Y+ +I G  KA  +
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           DEA  ++ +ME++ C PD +T+  LI G    G + +A  +F++M   GC PD +T ++L
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 549 ISCLLK 554
           I+ L K
Sbjct: 366 ITALGK 371



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 181/380 (47%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +M +L + G  D    + D M+  G  P        ++   + G    A  LL + 
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +          Y+ L+  L+K +  DEA  + K+  +    PDT T+N LI GL + G +
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLL 340

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  M S GC+PD+VTY+TLI+ L +   V     L +E++      PD+ TY S
Sbjct: 341 NDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEME-SVGIQPDLFTYCS 399

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+   K G++D A  +++EM   G+ P  +T+N  ++  G+ G    A  + E M   G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV T+ +L+ G  +  +++    L  E+  +  + +   F   +  L     +++A 
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAH 519

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+      L P    YN +ID   KAG V EA   + +++E+  KPD V+++ LI   
Sbjct: 520 ELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL 579

Query: 518 CMKGRMVEAISIFNKMLRIG 537
              G++  A  +  +M + G
Sbjct: 580 GQTGQIDTAFELLEEMSKRG 599



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 131/242 (54%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP+VVTY S+++   K G+ ++A  ++ E+ +    P  V+++ LI+  G+ G   +A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M + G  P++ T+++L+D   + GQ ++ L+L  EM+     P+V T+  LI+ L 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  RL++A     +++    VP  F YN +I G  K G   +A  ++ EME   C PD +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T++ LI G    G  V+A  +F +M R G  PD IT  +L+  L K G  ++A  ++   
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 569 SE 570
            E
Sbjct: 246 KE 247


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 229/450 (50%), Gaps = 39/450 (8%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+ +V++S C+ G L D  ++ F+ M  +G  P+       +    + G+ D A  L  +
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKL-FEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  S + YNSLLNA  K+    EA+ +FK       +PD  T++ +I GL + G+
Sbjct: 69  MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128

Query: 277 VKKAFE-FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           V +A E  F+ M   GCS + V YN LI+GLC+   + R ++LL+E+  K  + PD +TY
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG-YVPDNITY 187

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID-------------------- 375
            +++SG C++GK+ +A   ++ M S G  P  V +N L+D                    
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIA 247

Query: 376 ---------------GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
                          G  +  NM  AE M ++M++ G  P+  T+S ++ G+CR  +++ 
Sbjct: 248 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDD 307

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             K+ +EM      P+V T+ IL++ LCK N ++ A      +  N   P    Y+ V++
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK   V +A V+   M E++  PD VTF IL+ G C  G++ EA  + ++M   GCAP
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D +  N+L++ L K G   +A R+ Q   E
Sbjct: 428 DYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 205/395 (51%), Gaps = 2/395 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ L  S  TYN ++ + C+         +F  M   G  P+       +S   + GK 
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 208 -DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            +A + L  +      + +T  YN+L+N L K  N + A  + +E       PD  T+N 
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           ++ GL R+G+V +A +FF  M S G SPD+V YN L+  L +  +     +L K+V  K 
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            + PD VTY S++ G  +   MD+A  ++ +M + G  P+  T+++++ G  +   +  A
Sbjct: 250 -YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + E M   G +PDVVT++ L+DG C+   +++  +L   M     +P++ ++++++N 
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 368

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK N+++DAR    ++    LVP    +N ++DG CKAG +DEA  ++ +M    C PD
Sbjct: 369 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            V +  L+ G   +GR ++A  +   M   G   D
Sbjct: 429 YVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 189/345 (54%), Gaps = 2/345 (0%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           E + + + +  +L +  KQ    +   +F++       PD   +NILI G ++ G V +A
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
              + +M S G  P I TYN+L++  C+  ++    EL K +  K  F PDVVTY+++IS
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKG-FEPDVVTYSTIIS 121

Query: 341 GYCKLGKMDKATG-IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           G CK GK+ +A   ++++M   G   + V +N LI+G  K  N+  A  + E M S GY+
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD +T+++++ G CR G++++  +  D M  +  SP+V  +  L++AL KE + ++A + 
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            K +     +P    YN ++ G  +  N+DEA  +  +M    C P+  T++I++ GHC 
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             ++ +A  +  +M +IG  PD +T N L+  L K  + ++A  +
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 346



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 130/241 (53%), Gaps = 1/241 (0%)

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           E SP+  T+  V+  +CK GK+     ++ +M   GI P  + +N+LIDG+ K G +  A
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + E M+S G  P + T++SL++ +C+  ++ + ++L   M  K   P+V T++ +I+ 
Sbjct: 63  NRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122

Query: 447 LCKENRLNDARRFL-KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           LCK  ++ +A   L  ++           YN +I+G CK  N++ A  ++ EM  K   P
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D +T+  ++ G C  G++ EA   F+ M   G +PD +  N L+  L K G  +EA ++ 
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF 242

Query: 566 Q 566
           +
Sbjct: 243 K 243



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 74/135 (54%)

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           +  SPN YTF +++ + CK+ +L D  +  +Q+  N + P    YN +IDG+ K G VDE
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           AN +  EM     +P   T+  L+   C + +M EA+ +F  M   G  PD +T +++IS
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 551 CLLKGGMPNEAFRIM 565
            L K G   EA  ++
Sbjct: 122 GLCKTGKVTEALEML 136



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           + C P++ TF +++   C +G++ +   +F +ML  G +PD I  N LI    K G  +E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 561 AFRIMQR 567
           A R+ + 
Sbjct: 62  ANRLYEE 68


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/426 (33%), Positives = 221/426 (51%), Gaps = 18/426 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL--LS 215
           TY  ++R  C  G  D  Q  FD MRS   +PN      F+ S +  G C A + +  L 
Sbjct: 11  TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPN-----VFLCSILIDGLCKAKRSIDALR 65

Query: 216 QFRPGE---VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            FR  +   +   T +Y +LL+ L K+   D+A+ +  E      +P+  T+N LI GL 
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV------KFKS 326
           +  E  +A E F  M S  CSP +VTYNTL+ GL R  ++ R   L +E+          
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             SP+V+TY+ +I G CK  ++ +A  +   M + G  P  +T+ +L+DG  K   + +A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 387 -EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
            E +RE ML  G +P++VT++SL+ G CR  +++  L L  +M  +  +PNV T+  LI+
Sbjct: 246 WEVLRE-MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK  R+ DA   L  +      P   +YN +I+G CKA  VDE+  ++        KP
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D VT++ +I G C   R+ EA  +   +   GC PD I  ++LI  L K G  +EAF + 
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 566 QRASED 571
           +  + D
Sbjct: 425 EVMAGD 430



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 208/401 (51%), Gaps = 8/401 (1%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D    +   MR  G  PN       +    +  + D A+ L    +  E + S   YN+L
Sbjct: 96  DQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTL 155

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFY 285
           L+ L +    + A+ +F+E     S        P+  T+++LI GL +   V +A E   
Sbjct: 156 LDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLE 215

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M + GCSPD++TY  L+ GLC+ ++VA   E+L+E+   +   P++VTY S++ G C+ 
Sbjct: 216 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM-LDAGCVPNLVTYNSLLHGLCRA 274

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            ++  A  +  +M   G  P+ VT+  LIDG  KVG +  A  M   M+  G  PD++ +
Sbjct: 275 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 334

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           + LI+G C+  Q+++ + L        + P+V T++ +I  LC+ NRL++A R L  +K 
Sbjct: 335 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 394

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P   +Y+ +IDG CKAG VDEA  +   M    C  D VT++ LI G C  GR+ E
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDE 454

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           A  +  +M+R+G  P  +T NSLI  L      +EA  +++
Sbjct: 455 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 495



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 217/418 (51%), Gaps = 8/418 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    D  Q +F++M+S    P+       +    R GK + A  L  + 
Sbjct: 116 TYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 175

Query: 218 -------RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
                       + +   Y+ L++ L K N   +AV + +        PD  T+ IL+ G
Sbjct: 176 LDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 235

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L +  +V  A+E   +M   GC P++VTYN+L+ GLCR   V+    L++++  +   +P
Sbjct: 236 LCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG-CTP 294

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +VVTY ++I G CK+G++  A  +  +M   G  P  + +N+LI+G  K   +  +  + 
Sbjct: 295 NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            R +S G  PDVVT+SS+I G CR+ +L++  +L   +K +   P+V  ++ LI+ LCK 
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            ++++A    + +  +        Y+ +IDG CKAG VDEA++++A M      P  +T+
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 474

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
             LI G C    + EAI +  +M R  CAP  +T N LI  + +    + A  ++++A
Sbjct: 475 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQA 532



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 210/425 (49%), Gaps = 12/425 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC+         + + M++ G  P+       V    +  K  AA  +L + 
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 252

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YNSLL+ L +     +A+ + ++       P+  T+  LI GL ++G V
Sbjct: 253 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 312

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A     DM   G +PD++ YN LI+GLC+ ++V     LL+         PDVVTY+S
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA-VSGGIKPDVVTYSS 371

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G C+  ++D+A  +   + S G  P  + ++ LIDG  K G +  A  + E M   G
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              DVVT+S+LIDG C+ G++++   L   M      P+  T+  LI  LC  N L++A 
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP------DKVTFT 511
             +++++ ++  P    YN +I G C+   VD A V++ E  + RC        D + ++
Sbjct: 492 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA-VVLLEQAKARCVAAGGTALDTIAYS 550

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI G C  GR+ EA+  F +M+  G  PD IT     S LL+G   ++    ++    D
Sbjct: 551 SLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITY----SILLEGLKKSKDLHELRHLVLD 606

Query: 572 QNLQL 576
           Q +QL
Sbjct: 607 QMVQL 611



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 181/350 (51%), Gaps = 8/350 (2%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            + Y +LL    +    D+A   F E       P+ +  +ILI GL +      A   F 
Sbjct: 9   VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFR 68

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M   G   D V Y  L+SGL +   + +   +L E++      P+VVTY S+I G CK 
Sbjct: 69  AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMR-DHGCEPNVVTYNSLIDGLCKN 127

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL------ 399
            + D+A  ++  M S    PS VT+N L+DG  + G +  A  + + ML           
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187

Query: 400 -PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+V+T+S LIDG C+  +++Q ++L + MK +  SP+V T+TIL++ LCKE+++  A  
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L+++     VP    YN ++ G C+A  V +A  ++ +M  + C P+ VT+  LI G C
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
             GR+ +A ++   M+  G  PD +  N LI+ L K    +E+  +++RA
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 357



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 150/315 (47%), Gaps = 41/315 (13%)

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK-------------------------- 325
           C PD+ TY  L+ G CR  E+ +      E++ K                          
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 326 --------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
                   S    D V YT+++SG  K  ++D+A  I +EM   G +P+ VT+N LIDG 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK------ 431
            K      A+ + E M S    P +VT+++L+DG  R G+L + + L  EM  +      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 432 -NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
              SPNV T+++LI+ LCK NR++ A   L+ +K     P    Y  ++DG CK   V  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  ++ EM +  C P+ VT+  L+ G C   R+ +A+++   M   GC P+ +T  +LI 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 551 CLLKGGMPNEAFRIM 565
            L K G   +A  ++
Sbjct: 305 GLCKVGRVKDACAML 319



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 128/245 (52%), Gaps = 7/245 (2%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV TY +++ G+C+ G++D+A   ++EM S  + P+    ++LIDG  K    + A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
               M   G + D V +++L+ G  +  +L+Q L +  EM+     PNV T+  LI+ LC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK------- 501
           K N  + A+   + +K  +  P    YN ++DG  + G ++ A  +  EM ++       
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           RC P+ +T+++LI G C   R+ +A+ +   M   GC+PD IT   L+  L K      A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 562 FRIMQ 566
           + +++
Sbjct: 246 WEVLR 250



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 5/246 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC     D    +  Y++S G  P+  +    +    +AGK D A  L    
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 427

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y++L++ L K    DEA  +     R+ + P T T+N LI+GL  +  +
Sbjct: 428 AGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHL 487

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK----SEFSPDVV 333
            +A E   +M    C+P  VTYN LI G+CR+  V     LL++ K +       + D +
Sbjct: 488 DEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTI 547

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM-RER 392
            Y+S+I G CK G++ +A   + EM   G+ P  +T+++L++G  K  ++    ++  ++
Sbjct: 548 AYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQ 607

Query: 393 MLSFGY 398
           M+  GY
Sbjct: 608 MVQLGY 613



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 7/138 (5%)

Query: 155 SFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           S  TYN +++ LC++  L +++++V +  RS+   P++      +    R  + D+A  L
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA-PSAVTYNILIHGMCRMERVDSAVVL 528

Query: 214 LSQFR-----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           L Q +      G   + T  Y+SL++ L K     EA+  F+E       PD  T++IL+
Sbjct: 529 LEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILL 588

Query: 269 QGLSRIGEVKKAFEFFYD 286
           +GL +  ++ +      D
Sbjct: 589 EGLKKSKDLHELRHLVLD 606


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 219/418 (52%), Gaps = 7/418 (1%)

Query: 151  SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            +L     T+  ++  LC+ G  ++ + + D M + G  PN       V    ++G+ + A
Sbjct: 597  NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656

Query: 211  KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
               L +         +  Y SL+ AL + +  D+A+ +  E       PDT T+NIL+ G
Sbjct: 657  CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716

Query: 271  LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS- 329
            L + G+ ++A     +M   G  PD+VTYNTLI  LC+  ++     L  ++  +     
Sbjct: 717  LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCC 776

Query: 330  -PDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             P+VVTY+ +I+G CK+G++D+A  +  EM   SC + P+ +T+N  +DG  K   M  A
Sbjct: 777  VPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA 836

Query: 387  -EYMRE-RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
             E MR  R  S    PD VTFS+LIDG C+ GQ ++   + D+M      PNV T+ +L+
Sbjct: 837  CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLM 896

Query: 445  NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
            N LCK +++  A   ++ +    + P    Y+ ++D FCKA +VDEA  ++  M  + C 
Sbjct: 897  NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956

Query: 505  PDKVTFTILIIGHCMKGRMVEAISIFNKM-LRIGCAPDDITVNSLISCLLKGGMPNEA 561
            P+ VTF  +I G C   +  EA  +F+ M L+ G APD IT  +LI  L + G   +A
Sbjct: 957  PNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA 1014



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 206/408 (50%), Gaps = 6/408 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++  LC+ G  D    VFD M + G++PN       V+   +A K + A  ++   
Sbjct: 362 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 421

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT     Y+ L++A  K +  DEA+ +          P+  TFN +I GL +    
Sbjct: 422 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481

Query: 278 KKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            +AF+ F DM    G  PD +TY TLI GL R     +   LL  +       PD   + 
Sbjct: 482 GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP-----DPDTYAFN 536

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
             I+G  KLG + +A  +YN M    + P  VTFN+LI G  K GN   A  + E M++ 
Sbjct: 537 CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PDV+TF +LIDG C+ GQ+     + D M    + PNV T+  L++ LCK  R+ +A
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +FL+++  +  VP    Y  ++   C+A   D+A  +V+E++     PD VT+ IL+ G
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
               G+  +AI++  +M+  G  PD +T N+LI  L K G   EA R+
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 225/487 (46%), Gaps = 70/487 (14%)

Query: 149  NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
            NL +  +  TYN ++  LC+ G  +      + M S G +P+S      V +  RA + D
Sbjct: 630  NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 209  AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
             A  L+S+ +       T  YN L++ L K    ++A+ + +E       PD  T+N LI
Sbjct: 690  DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 269  QGLSRIGEVKKAFEFFYDMG---SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
              L + G++++A     DM    S  C P++VTY+ LI+GLC+V  +    EL++E+  K
Sbjct: 750  DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 326  S--------------------------------------EFSPDVVTYTSVISGYCKLGK 347
            S                                        SPD VT++++I G CK G+
Sbjct: 810  SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 348  MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
             D+A  ++++M + G  P+ VT+NVL++G  K   M  A  M E M+  G  PDV+T+S 
Sbjct: 870  TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 408  LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW-N 466
            L+D +C+   +++ L+L   M  +  +PNV TF  +I+ LCK ++  +A +    +   +
Sbjct: 930  LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKH 989

Query: 467  DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME--------------------------- 499
             L P    Y  +IDG  + G   +A V++  M                            
Sbjct: 990  GLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRM 1049

Query: 500  -EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             E    PDKVTF ILI G C  G   +A ++F +M+     PD +T  +LI  L K G  
Sbjct: 1050 LELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109

Query: 559  NEAFRIM 565
               + IM
Sbjct: 1110 EATWDIM 1116



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 218/444 (49%), Gaps = 36/444 (8%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           YN+V++SLC  G    ++++    M  DG  P        ++   ++ +  A   L  + 
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN+L+++L K  + +EA  +  +       P+  T+++LI GL ++G +
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302

Query: 278 KKAFEFFYDMGSFGCS--PDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVT 334
            +A E   +M    C   P+I+TYN+ + GLC+ +  A   EL++ ++  S   SPD VT
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           ++++I G CK G++D+A  ++++M + G  P+ +T+N L++G  K   M  A  M E M+
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PDV+T+S L+D +C+  ++++ L+L   M  +  +PNV TF  +I+ LCK +R  
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 455 DARRFLKQLKWN------------------------------DLVPKP--FMYNPVIDGF 482
           +A +    +                                 D +P P  + +N  I+G 
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL 542

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G+V  A  +   M E    PDKVTF ILI G C  G   +A ++F +M+     PD 
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
           +T  +LI  L K G    A  I+ 
Sbjct: 603 MTFGALIDGLCKAGQVEAARDILD 626



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 186/370 (50%), Gaps = 22/370 (5%)

Query: 214 LSQFRPGEVTMSTF------MYNSLLNALVKQ--NNADEAVYMFKEYFRLYSQPDT-WTF 264
           L   RPG+  ++        ++ S+  A++ Q   NA+     +     L     T ++F
Sbjct: 55  LESLRPGQSVVAALRGCKGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSF 114

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           N  +  L + G   KA + F       C P+  TY+TL+    +      G ++ + + F
Sbjct: 115 NKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKA-----GGDVERTLGF 169

Query: 325 ---KSEFSPDVVTYTSVISGYCKLGKMDKATGIY-NEMNSCGIKPSAVTFNVLIDGFGKV 380
                  S  V  Y  V+   C+ G+  +A  I+  EM   G+ P+ VT+N +I+G  K 
Sbjct: 170 FRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKS 229

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             + +   + E ++  G+ PDVVT+++LID  C+ G L +  +L  +M  ++  PNV T+
Sbjct: 230 NELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTY 289

Query: 441 TILINALCKENRLNDARRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           ++LIN LCK  R+++AR  ++++  K  D++P    YN  +DG CK     EA  ++  +
Sbjct: 290 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 349

Query: 499 EEK--RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            +   R  PD VTF+ LI G C  G++ EA S+F+ M+  G  P+ IT N+L++ L K  
Sbjct: 350 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 409

Query: 557 MPNEAFRIMQ 566
               A  +++
Sbjct: 410 KMERAHAMIE 419



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 168/353 (47%), Gaps = 17/353 (4%)

Query: 106  SSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRS 165
            SS +S  C   +      +N L  + R+D  +  ++  E  R +  +  +  TYN  +  
Sbjct: 769  SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ--EMMRKSCDVLPNIITYNSFLDG 826

Query: 166  LCEMGLHDSVQVVFDYMRS--DGHL---PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
            LC+  +   +    + MRS  DG L   P++      +    + G+ D A  +      G
Sbjct: 827  LCKQSM---MAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG 883

Query: 221  EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
                +   YN L+N L K +  + A  M +        PD  T+++L+    +   V +A
Sbjct: 884  GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEA 943

Query: 281  FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
             E  + M S GC+P++VT+N++I GLC+ ++     ++  ++  K   +PD +TY ++I 
Sbjct: 944  LELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLID 1003

Query: 341  GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
            G  + G   +A  + + M      P    FN  I+G  K+G++  A +   RML    +P
Sbjct: 1004 GLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALH---RMLELELVP 1056

Query: 401  DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            D VTF+ LI G C+ G   Q   L +EM  KNL P+V TF  LI+ LCK  ++
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 39/178 (21%)

Query: 437 VYTFTILINALCKENRLNDARR-FLKQLKWNDLVPKPFMYNPVIDG-------------- 481
           V  + I++ +LC+      A   F  ++  + + P    YN +I+G              
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239

Query: 482 ---------------------FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
                                 CKAG+++EA  +  +M  + C P+ VT+++LI G C  
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299

Query: 521 GRMVEAISIFNKMLRIGC--APDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           GR+ EA  +  +M R  C   P+ IT NS +  L K  M  EA  +M R+  D +L++
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRV 356


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 222/430 (51%), Gaps = 6/430 (1%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S V+  +     TYN V++ L   G  D  + VF  M + G  P+       +    RAG
Sbjct: 219 SMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAG 278

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + + A     + R   VT     ++ L+    ++   D A    +E       PD   + 
Sbjct: 279 ELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYT 338

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ++I G  R G + +A     +M +FGC PD+VTYNTL++GLC+   ++   ELL E+K +
Sbjct: 339 MVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER 398

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PD+ T+T++I GYC+ G ++KA   ++ ++   ++P  VT+N LIDG  + G++  
Sbjct: 399 G-VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + + M S    P+ VT+S LID +C  GQ++      DEM  K + PN+ T+  +I 
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C+   ++  ++FL +++ + ++P    YN +I G+ K G + EA  ++  ME +  +P
Sbjct: 518 GYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQP 577

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D VT+ ++I G  + G M EA  ++ KM   G  PD  T  S+I+  +  G   ++F++ 
Sbjct: 578 DAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL- 636

Query: 566 QRASEDQNLQ 575
                D+ LQ
Sbjct: 637 ----HDEMLQ 642



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/438 (31%), Positives = 221/438 (50%), Gaps = 18/438 (4%)

Query: 147 RVNLSLNHSFKTY--NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           R+ LS N    TY  N+++ S C+      V  V   M      P+       V +  RA
Sbjct: 148 RLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRA 207

Query: 205 GKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           G  +AA  L+        +PG VT     YNS+L  L++    D+A  +F+        P
Sbjct: 208 GDVEAAMALIDSMVSKGIKPGLVT-----YNSVLKGLLRNGRWDKAREVFRAMDACGVAP 262

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  +FN+LI G  R GE+++A  F+ +M     +PD+V+++ LI    R  E+    E L
Sbjct: 263 DVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYL 322

Query: 320 KEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +E++   EF   PD V YT VI G+C+ G M +A  + +EM + G  P  VT+N L++G 
Sbjct: 323 REMR---EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGL 379

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K   +  AE +   M   G  PD+ TF++LI GYCR+G + + L+  D +  + L P++
Sbjct: 380 CKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDI 439

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  LI+ +C++  L  A      +   ++ P    Y+ +ID  C+ G VD A   + E
Sbjct: 440 VTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K   P+ +T+  +I G+C  G + +      KM      PD IT N+LI   +K G 
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559

Query: 558 PNEAFRIMQRASEDQNLQ 575
            +EAF ++ +  E++N+Q
Sbjct: 560 MHEAFNLL-KIMENENVQ 576



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 62/148 (41%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +  +  TYN +++  C  G     Q     MR D  +P+       +   ++ GK 
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  LL       V      YN +++      N  EA +++K+      +PD +T+  +
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSM 620

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           I G    G  KK+F+   +M   G +PD
Sbjct: 621 INGHVVAGNSKKSFQLHDEMLQKGLAPD 648


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 223/409 (54%), Gaps = 9/409 (2%)

Query: 158 TYNLVMRSLCE-MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY +++  LC+   + ++ Q++ + ++ D H P++ +    ++   + GK DAA+ +L  
Sbjct: 94  TYCILIHGLCQCQRIDEAYQLLDEMIQKDCH-PDAAVYNCLIAGLCKMGKIDAARNVLKM 152

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                       Y SL+    + N  DEA  + ++       PDT  +N L+ GL +  +
Sbjct: 153 MLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQ 212

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++  +   +M   G  PD  +YNT+++ LC   +     ++L+++  + +  PDVVTY 
Sbjct: 213 LEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM-IEKKCGPDVVTYN 271

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++ G+CK+ KMD+A  +  +M      P+ +T+  LI GF +   +  A  + E M   
Sbjct: 272 SLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKA 331

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD+VT++ L+DG C+ G+L +  +L + M  K+ +P+V T++IL+N LCK  +++DA
Sbjct: 332 GISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDA 391

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R  L+ +      P    +N +IDGFCKAG VDE + ++  M+E  C PD VT++ LI G
Sbjct: 392 RLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDG 451

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +C   RM +A +I      +G +PD  + +S++  L   G   EA  +M
Sbjct: 452 YCKANRMQDAFAI------LGISPDKASYSSMLEGLCSTGKVEEAQEVM 494



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 209/438 (47%), Gaps = 30/438 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++  LC+    + V  + + M   G  P++      V+    +GK + A  +L + 
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +       YNSL++   K +  DEA  + ++       P   T+  LI G SR   +
Sbjct: 259 IEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRL 318

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+    DM   G SPD+VTYN L+ GLC+  ++   HELL EV  + + +PDVVTY+ 
Sbjct: 319 ADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL-EVMVEKDCAPDVVTYSI 377

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CKLGK+D A  +   M   G +P+ VTFN +IDGF K G +     + E M    
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437

Query: 398 YLPDVVTFSSLIDGYCR-----------------------------NGQLNQGLKLCDEM 428
             PDVVT+S+LIDGYC+                              G++ +  ++ D M
Sbjct: 438 CTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLM 497

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             +   P    + ++I  LC   R ++A + L+ +      P  + Y+ +I+G CK   V
Sbjct: 498 TKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRV 557

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           ++A  ++  M EK C PD  T+T LI G C   +M  A   F  M   GC PD +  N L
Sbjct: 558 EDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNIL 617

Query: 549 ISCLLKGGMPNEAFRIMQ 566
           IS   + G   +A  +MQ
Sbjct: 618 ISGFCQSGNVEKAIEVMQ 635



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 201/359 (55%), Gaps = 4/359 (1%)

Query: 214 LSQFRPGEVTMS--TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           LS FR G++  S   F Y  L++ L +    DEA  +  E  +    PD   +N LI GL
Sbjct: 79  LSHFR-GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            ++G++  A      M    C PD++TY +LI G C+ N +    +L++++K +S  +PD
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK-ESGLTPD 196

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            V Y ++++G CK  ++++ + +  EM   G +P   ++N ++    + G    A  + E
Sbjct: 197 TVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILE 256

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M+     PDVVT++SL+DG+C+  ++++  +L ++M G+  +P V T+T LI    + +
Sbjct: 257 KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRAD 316

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           RL DA R ++ +    + P    YN ++DG CKAG ++EA+ ++  M EK C PD VT++
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           IL+ G C  G++ +A  +   ML  GC P+ +T N++I    K G  +E  ++++   E
Sbjct: 377 ILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 173/323 (53%), Gaps = 3/323 (0%)

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           E    F+E F   S+P   T+  LI G SR G  K   E   +M +   SPD++T+NT++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
              C++ ++ R    L   + K   SP   TY  +I G C+  ++D+A  + +EM     
Sbjct: 67  KAYCQIGDLDRA---LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P A  +N LI G  K+G + +A  + + ML    +PDV+T++SLI G C+   L++  K
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L ++MK   L+P+   +  L+N LCK+N+L +  + L+++      P  F YN V+   C
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           ++G  +EA  I+ +M EK+C PD VT+  L+ G C   +M EA  +   M+   CAP  I
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
           T  +LI    +     +A+R+M+
Sbjct: 304 TYTTLIGGFSRADRLADAYRVME 326



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 11/295 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC++G  D  +++ + M   G  PN       +    +AGK D    +L   
Sbjct: 374 TYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELM 433

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    T     Y++L++   K N   +A      +  L   PD  +++ +++GL   G+V
Sbjct: 434 KEVSCTPDVVTYSTLIDGYCKANRMQDA------FAILGISPDKASYSSMLEGLCSTGKV 487

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--FSPDVVTY 335
           ++A E    M   GC P    Y  +I GLC   +V RG E LK ++  SE    P++ TY
Sbjct: 488 EEAQEVMDLMTKQGCPPTSSHYALIIGGLC---DVERGDEALKMLQVMSERGCEPNLYTY 544

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           + +I+G CK  +++ A  + + M   G  P   T+  LIDGF K+  M +A    + M  
Sbjct: 545 SILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRD 604

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            G  PD + ++ LI G+C++G + + +++   M  K  +P+  T+  L+ +L  E
Sbjct: 605 SGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 1/190 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L ++    +Y+ ++  LC  G  +  Q V D M   G  P S      +       + D 
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +L          + + Y+ L+N L K    ++A+ +          PD  T+  LI 
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  +I ++  A++ F  M   GC PD + YN LISG C+   V +  E++ ++  +   +
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM-QLMLEKGCN 643

Query: 330 PDVVTYTSVI 339
           PD  TY S++
Sbjct: 644 PDAATYFSLM 653


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 213/406 (52%), Gaps = 1/406 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           ++L++R+ CE+   +     F  ++  G +PN       +S  ++  +   A  L ++  
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  S + +N ++N L K+    +A         L  +P+  T+N +I G    G+ +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A   F  M   G  PD  TYN+ ISGLC+   +     L+ ++  +    P+ VTY ++
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM-LEGGLVPNAVTYNAL 327

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYC  G +DKA    +EM S GI  S VT+N+ I      G M  A+ M + M   G 
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGM 387

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +PD VT + LI+GYCR G   +   L DEM GK + P + T+T LI  L K NR+ +A  
Sbjct: 388 MPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              +++   L+P   ++N +IDG C  GN+D A  ++ EM+  +  PD++T+  L+ G+C
Sbjct: 448 LFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYC 507

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +G++ EA  + ++M R G  PD I+ N+LIS   K G   +AFR+
Sbjct: 508 REGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRV 553



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 201/411 (48%), Gaps = 3/411 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           + E  R+N+    S  T+N+++  LC+ G     +    +M + G  PN       +   
Sbjct: 204 YAEMFRMNI--RSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGH 261

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              GK   A+ +    +   +    + YNS ++ L K+   +EA  +  +       P+ 
Sbjct: 262 CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+N LI G    G++ KA+ +  +M S G    +VTYN  I  L     +     ++KE
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ K    PD VT+  +I+GYC+ G   +A G+ +EM   GI+P+ VT+  LI   GK  
Sbjct: 382 MREKG-MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRN 440

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            M  A+ +  ++   G LPD++ F++LIDG+C NG +++  +L  EM    + P+  T+ 
Sbjct: 441 RMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYN 500

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+   C+E ++ +AR+ L ++K   + P    YN +I G+ K G++ +A  +  EM   
Sbjct: 501 TLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTT 560

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              P  +T+  LI G C       A  +  +M+  G  PDD T  S+I  +
Sbjct: 561 GFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 184/345 (53%), Gaps = 7/345 (2%)

Query: 225 STFMYNSLLNA---LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +T +++ L+ A   L K N A E  Y+ KE   +   P+  T N ++    ++   + A+
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFV---PNIETCNQMLSLFLKLNRTQMAW 201

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             + +M        + T+N +I+ LC+  ++ +  E +  ++      P+VVTY ++I G
Sbjct: 202 VLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLG-VKPNVVTYNTIIHG 260

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +C  GK  +A  I+  M   G++P   T+N  I G  K G +  A  +  +ML  G +P+
Sbjct: 261 HCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPN 320

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            VT+++LIDGYC  G L++     DEM  K +  ++ T+ + I+AL  E R+ DA   +K
Sbjct: 321 AVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIK 380

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           +++   ++P    +N +I+G+C+ G+   A  ++ EM  K  +P  VT+T LI     + 
Sbjct: 381 EMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRN 440

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           RM EA ++F+K+ + G  PD I  N+LI      G  + AF++++
Sbjct: 441 RMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 34/263 (12%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYNL + +L   G       +   MR  G +P++      ++   R G    A GLL
Sbjct: 355 SLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLL 414

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  +   Y SL+  L K+N   EA  +F +  +    PD   FN LI G    
Sbjct: 415 DEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCAN 474

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK--------- 325
           G + +AF+   +M +    PD +TYNTL+ G CR  +V    +LL E+K +         
Sbjct: 475 GNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISY 534

Query: 326 -------------------------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
                                    + F P ++TY ++I G CK  + + A  +  EM S
Sbjct: 535 NTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVS 594

Query: 361 CGIKPSAVTFNVLIDGFGKVGNM 383
            GI P   T+  +I+    V ++
Sbjct: 595 KGITPDDSTYLSIIEAMETVDDL 617



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/121 (20%), Positives = 49/121 (40%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M+  C  G  +  + + D M+  G  P+       +S   + G    A  +  + 
Sbjct: 498 TYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+L+  L K    + A  + KE       PD  T+  +I+ +  + ++
Sbjct: 558 MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDL 617

Query: 278 K 278
           +
Sbjct: 618 E 618


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/424 (32%), Positives = 218/424 (51%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R+LC  G       V   MR  G  PN+      V++  RAG+ D A+ L+   
Sbjct: 159 TYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMM 218

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G +  +   +NS++N + K    ++A  +F E  +    PD  ++N L+ G  ++G  
Sbjct: 219 REGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCS 278

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M   G  PD+VT+ +LI  +C+   + R   L++E++ +     + +T+T+
Sbjct: 279 HEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG-LQMNEITFTA 337

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK G +D A     EM  C I+PS V +N LI+G+  VG M  A  +   M + G
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+S+++  YC+NG  +   +L  +M    + P+  T++ LI  LC+E RL DA 
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +    L P    Y  +IDG CK GNV+ A  +  EM +    PD VT+++LI G 
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC-----------LLKG----GMPNEAF 562
               R  EA  +  K+      P +I  ++L+ C           LLKG    G+ NEA 
Sbjct: 518 SKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEAD 577

Query: 563 RIMQ 566
           ++ Q
Sbjct: 578 KVYQ 581



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 181/328 (55%), Gaps = 2/328 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   YN++L AL    +   A   F         P+ +T+NIL++ L   G  K+A    
Sbjct: 122 SVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVL 180

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            DM   GC P+ VTYNTL++  CR  EV R   L+  ++ +    P++VT+ SV++G CK
Sbjct: 181 RDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR-EGGLKPNLVTFNSVVNGICK 239

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G+M+ A  +++EM   G+ P  V++N L+ G+ KVG    A  +   M   G +PDVVT
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F+SLI   C+ G L + + L  EM+ + L  N  TFT LI+  CK+  L+DA   +++++
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    YN +I+G+C  G +DEA  +V EME K  KPD VT++ ++  +C  G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCL 552
            A  +  +ML  G  PD IT +SLI  L
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVL 447



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 213/411 (51%), Gaps = 2/411 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   YN V+ +L +  L  S +  FD M SDG  PN       V +    G    A  +L
Sbjct: 122 SVLAYNAVLLALSDASL-PSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVL 180

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              R      +   YN+L+ A  +    D A  +         +P+  TFN ++ G+ + 
Sbjct: 181 RDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKA 240

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G ++ A + F +M   G +PD V+YNTL+ G C+V        +  E+  K    PDVVT
Sbjct: 241 GRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG-IMPDVVT 299

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +TS+I   CK G +++A G+  EM   G++ + +TF  LIDGF K G +  A      M 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                P VV +++LI+GYC  G++++  +L  EM+ K + P+V T++ +++A CK    +
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A +  +Q+  N ++P    Y+ +I   C+   + +A+V+   M     +PD+VT+T LI
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            GHC +G +  A+S+ ++M++ G  PD +T + LI+ L K     EA R++
Sbjct: 480 DGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 217/431 (50%), Gaps = 16/431 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  +  T+N V+  +C+ G  +  + VFD M  +G  P+       V    + G    A 
Sbjct: 223 LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEAL 282

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + ++     +      + SL++ + K  N + AV + +E      Q +  TF  LI G 
Sbjct: 283 SVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGF 342

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G +  A     +M      P +V YN LI+G C V  +    EL++E++ K    PD
Sbjct: 343 CKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG-VKPD 401

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTY++++S YCK G    A  +  +M   G+ P A+T++ LI    +   +  A  + +
Sbjct: 402 VVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+S G  PD VT++SLIDG+C+ G + + L L DEM    + P+V T+++LIN L K  
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYN---------------PVIDGFCKAGNVDEANVIVA 496
           R  +A+R L +L   + VP    Y+                ++ GFC  G ++EA+ +  
Sbjct: 522 RTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQ 581

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            + ++    D   +++LI GHC +G +++A+S   +ML+ G AP+  +  SLI  L + G
Sbjct: 582 SILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKG 641

Query: 557 MPNEAFRIMQR 567
           M  EA +++Q+
Sbjct: 642 MVVEADQVIQQ 652



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 178/318 (55%), Gaps = 12/318 (3%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE- 317
           P    +N ++  LS    +  A  FF  M S G +P++ TYN L+  LC      RGH  
Sbjct: 121 PSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALC-----GRGHRK 174

Query: 318 ----LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               +L++++  +   P+ VTY ++++ +C+ G++D+A  + + M   G+KP+ VTFN +
Sbjct: 175 EALSVLRDMR-GAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSV 233

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           ++G  K G M  A  + + M+  G  PD V++++L+ GYC+ G  ++ L +  EM  K +
Sbjct: 234 VNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+V TFT LI+ +CK   L  A   +++++   L      +  +IDGFCK G +D+A +
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
            V EM + R +P  V +  LI G+CM GRM EA  +  +M   G  PD +T ++++S   
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 554 KGGMPNEAFRIMQRASED 571
           K G  + AF++ Q+  E+
Sbjct: 414 KNGDTHSAFQLNQQMLEN 431



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 189/433 (43%), Gaps = 51/433 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++   C++G       VF  M   G +P+       +    +AG  + A GL+ + 
Sbjct: 264 SYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM 323

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   + M+   + +L++   K+   D+A+   +E  +   QP    +N LI G   +G +
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E   +M + G  PD+VTY+T++S  C+  +     +L +++  ++   PD +TY+S
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM-LENGVLPDAITYSS 442

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C+  ++  A  ++  M S G++P  VT+  LIDG  K GN+  A  + + M+  G
Sbjct: 443 LIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAG 502

Query: 398 YLPDVVTFSSLIDG---------------------------------------------- 411
            LPDVVT+S LI+G                                              
Sbjct: 503 VLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLA 562

Query: 412 ----YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
               +C  G +N+  K+   +  +N + +   +++LI+  C+E  +  A  F KQ+    
Sbjct: 563 LLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P       +I G  + G V EA+ ++ ++       D      LI  +  +G +   +
Sbjct: 623 FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVL 682

Query: 528 SIFNKMLRIGCAP 540
            + + M R G  P
Sbjct: 683 DVLHGMARDGLLP 695



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 141/353 (39%), Gaps = 53/353 (15%)

Query: 133 LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           LD+  L ++ +   R+      S   YN ++   C +G  D  + +   M + G  P+  
Sbjct: 348 LDDALLAVREMRQCRIQ----PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVV 403

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +S+  + G   +A  L  Q     V      Y+SL+  L ++    +A  +FK  
Sbjct: 404 TYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL------ 306
             L  QPD  T+  LI G  + G V++A     +M   G  PD+VTY+ LI+GL      
Sbjct: 464 ISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSART 523

Query: 307 ----------------------------CRVNEVARGHELLKEVKFKS------------ 326
                                       CR  E+     LLK    K             
Sbjct: 524 KEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSI 583

Query: 327 ---EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
               ++ D   Y+ +I G+C+ G + KA   + +M  CG  P++ +   LI G  + G +
Sbjct: 584 LDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMV 643

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           V A+ + +++L+   L D     +LID   + G ++  L +   M    L P+
Sbjct: 644 VEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 30/267 (11%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R LCE+          KRL +  +  K +    ++L L     TY  ++   C+ G  + 
Sbjct: 445 RVLCEE----------KRLGDAHVLFKNM----ISLGLQPDEVTYTSLIDGHCKEGNVER 490

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLL- 233
              + D M   G LP+       ++   ++ +   A+ LL +    E   +   Y++L+ 
Sbjct: 491 ALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR 550

Query: 234 ---NALVKQNNA-----------DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
              NA +K   A           +EA  +++         D   +++LI G  R G V K
Sbjct: 551 CCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMK 610

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A  F   M   G +P+  +  +LI GL     V    ++++++      + D     ++I
Sbjct: 611 ALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLA-DAEASKALI 669

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPS 366
               K G +D    + + M   G+ PS
Sbjct: 670 DLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/483 (31%), Positives = 237/483 (49%), Gaps = 77/483 (15%)

Query: 122 SPLNSLEVIKR-LDNPKLGLK----FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           SP ++L ++K+ +++   G+K     L  +R  L    S   +++++R+ CE+   D   
Sbjct: 128 SPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSI-VFDMLIRACCELKRGDDAF 186

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
             FD M+  G +P    IE F                                N++L+  
Sbjct: 187 ECFDMMKEKGVVPK---IETF--------------------------------NAMLSLF 211

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
           +K N  +    ++ E FRL  +   +TFNI+I  L + G++KKA +F   M + G  P++
Sbjct: 212 LKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNV 271

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           VTYNT+I G C    V  G  ++ ++       PD  TY S+ISG CK GK+++A+GI  
Sbjct: 272 VTYNTVIHGYCSRGRV-EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILE 330

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML---------------------- 394
           +M   G+ P+AVT+N LIDG+   G++V A   R+ M+                      
Sbjct: 331 KMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEG 390

Query: 395 -------------SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
                          G +PD +T++ LI+GYCR G   +   L DEM  K + P + T+T
Sbjct: 391 KMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYT 450

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI  L K NR+  A    +++      P   M+N +IDG C  GN+D A  ++ EM+++
Sbjct: 451 SLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKR 510

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              PD+VT+  L+ G C +G++ EA  +  +M R G  PD I+ N+LIS   K G  N+A
Sbjct: 511 NIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDA 570

Query: 562 FRI 564
           F I
Sbjct: 571 FTI 573



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 207/412 (50%), Gaps = 1/412 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L +  +  T+N+++  LC+ G     +     M + G  PN       +      G+ + 
Sbjct: 230 LKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEG 289

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+ +L   +   V   ++ Y SL++ + K    +EA  + ++   +   P   T+N LI 
Sbjct: 290 ARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLID 349

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G    G++ KAF +  +M      P + TYN LI  L    ++     ++K++   S   
Sbjct: 350 GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMG-DSGIV 408

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD +TY  +I+GYC+ G   KA  +++EM S GI+P+ VT+  LI    K   M +A+ +
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E+++  G  PD++ F++LIDG+C NG L++   L  EM  +N+ P+  T+  L+   C+
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCR 528

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E ++ +AR  LK++K   + P    YN +I G+ K G++++A  I  EM      P  +T
Sbjct: 529 EGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLT 588

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +  LI G C   +   A  +  +M+  G  PDD T  SLI  + K    +EA
Sbjct: 589 YNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 179/379 (47%), Gaps = 36/379 (9%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL +  +  TYN V+   C  G  +  ++V D M++ G  P+S      +S   + GK +
Sbjct: 264 NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLE 323

Query: 209 AAKGLLSQFR-----PGEVTMSTFM------------------------------YNSLL 233
            A G+L + +     P  VT +T +                              YN L+
Sbjct: 324 EASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLI 383

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           +AL  +   DEA  M K+       PD+ T+NILI G  R G  KKAF    +M S G  
Sbjct: 384 HALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQ 443

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P +VTY +LI  L + N +    +L +++  +   SPD++ + ++I G+C  G +D+A  
Sbjct: 444 PTLVTYTSLIYVLSKRNRMKAADDLFEKI-IREGASPDLIMFNALIDGHCANGNLDRAFA 502

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +  EM+   I P  VT+N L+ G  + G +  A  + + M   G  PD +++++LI GY 
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYS 562

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G +N    + DEM     +P + T+  LI  LCK  + + A   LK++    + P   
Sbjct: 563 KRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622

Query: 474 MYNPVIDGFCKAGNVDEAN 492
            Y  +I+G  K  +  EA+
Sbjct: 623 TYFSLIEGIGKVDDSSEAS 641



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 79/168 (47%)

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           + F  LI   C   + +   +  D MK K + P + TF  +++   K N+         +
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    +    + +N +I+  CK G + +A   +  ME    KP+ VT+  +I G+C +GR
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  A  + + M   G  PD  T  SLIS + KGG   EA  I+++  E
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKE 334


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 193/341 (56%), Gaps = 1/341 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L+ LVK+   D    ++ +     + P+  T+  LI G  R G+  KAF  F +M  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               P +V Y  LI GLC  + ++    + + ++  S   P++ TY +++ GYCK+  + 
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMR-NSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           KA  +Y EM   G+ P+ VTF +LIDG  K   MVSA      M SFG +P++  ++ LI
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DGYC+ G L++ L L  E++   + P+V+T++ILI  LC  +R+ +A   L+++K    +
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +IDG+CK GN+++A  + ++M EK  +P+ +TF+ LI G+C  G+M  A+ +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + +M+  G  PD +   +LI    K G   EAFR+ +   E
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 212/430 (49%), Gaps = 17/430 (3%)

Query: 114 ARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY-----------NLV 162
           +R  C   + L+ LE  K   N   G+  + FS + L     +  Y           N+V
Sbjct: 106 SRICCSVFNVLSRLESSKFTPNV-FGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMV 164

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +  L + G  D++  V+  M + G  PN       +  C R G    A  L  +    ++
Sbjct: 165 LDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKI 224

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
             +  +Y  L+  L  ++   EA  MF+        P+ +T+N ++ G  +I  VKKA E
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVIS 340
            + +M   G  P++VT+  LI GLC+ +E+    + L ++   + F   P++  Y  +I 
Sbjct: 285 LYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM---ASFGVVPNIFVYNCLID 341

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           GYCK G + +A  +++E+    I P   T+++LI G   V  M  A+ + + M   G+LP
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           + VT+++LIDGYC+ G + + +++C +M  K + PN+ TF+ LI+  CK  ++  A    
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++    L+P    Y  +IDG  K GN  EA  +  EM+E    P+  T + LI G C  
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 521 GRMVEAISIF 530
           GR+ +AI +F
Sbjct: 522 GRISDAIKLF 531



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 143/284 (50%), Gaps = 35/284 (12%)

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           V +K +  P +     V+ G  K G+ D    +Y +M + G  P+ VT+  LIDG  + G
Sbjct: 148 VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQG 207

Query: 382 NMV-----------------------------------SAEYMRERMLSFGYLPDVVTFS 406
           + +                                    AE M   M + G LP++ T++
Sbjct: 208 DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYN 267

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +++DGYC+   + + L+L  EM G  L PNV TF ILI+ LCK + +  AR+FL  +   
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF 327

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            +VP  F+YN +IDG+CKAGN+ EA  + +E+E+    PD  T++ILI G C   RM EA
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +  +M + G  P+ +T N+LI    K G   +A  +  + +E
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/322 (19%), Positives = 143/322 (44%), Gaps = 19/322 (5%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLY-SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           N  L   ++ +N  + +  F+   R   S  D+++    ++  +    + +  +    + 
Sbjct: 599 NQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVI 658

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           +FG  P I    +LIS       VA  H +  E+      S +++++TSVIS Y    + 
Sbjct: 659 NFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIP-----SKNLISWTSVISAYVDNQRP 713

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           +KA  ++ +M    ++P  VT  V +     +G +   E++   +   G   D+   +SL
Sbjct: 714 NKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 773

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN-D 467
           I+ Y + G++    +         + PN  TF  ++ A      + + ++  + +K +  
Sbjct: 774 INMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYS 827

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P+   +  ++D  C+AG + EA   + +M     +P+ V +  L+    ++G   + +
Sbjct: 828 LRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACSLQGMWDKKM 884

Query: 528 SIFNKMLR---IGCAPDDITVN 546
            + N++ +    GC+  ++ ++
Sbjct: 885 LVRNQIKQRRDPGCSSIEVGID 906



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 38/203 (18%)

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            F VLI  F ++G +  A ++  +M     LP +   + ++DG  + G+ +   K+  +M
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDM 184

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             +  SPNV T                                   Y  +IDG C+ G+ 
Sbjct: 185 VARGASPNVVT-----------------------------------YGTLIDGCCRQGDF 209

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            +A  +  EM EK+  P  V +TILI G C + R+ EA S+F  M   G  P+  T N++
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269

Query: 549 ISCLLKGGMPNEAFRIMQRASED 571
           +    K     +A  + Q    D
Sbjct: 270 MDGYCKIAHVKKALELYQEMLGD 292


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 258/525 (49%), Gaps = 33/525 (6%)

Query: 51   FTVRPSRVRASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSY-L 109
            F+ RP + R + +A    FH                          K+V  L  R ++  
Sbjct: 763  FSPRPHQYRVTAVATQGGFHH-------------------------KIVRILNSRFAWEY 797

Query: 110  SDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEM 169
            ++T       KL+     +V++ + N    L F +++      NH   T N ++++L  +
Sbjct: 798  AETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRL 857

Query: 170  GL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
                D++QV   Y       PN       +    RAG    A  LL +     V  +  +
Sbjct: 858  KRPKDALQV---YRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVIL 914

Query: 229  YNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            +N ++  L      D A+ +FKE     S  PD +T++ ++  L + G+V  A     DM
Sbjct: 915  HNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDM 974

Query: 288  GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
             S GCSP++VTY++L+ GLC+  ++     LL+ +  +S  SP++VTY ++I G+CKLG+
Sbjct: 975  VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT-RSGCSPNIVTYNTIIDGHCKLGR 1033

Query: 348  MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            +D+A  +  EM   G +P+ VT+ VL+D F K G    A  + E M+  GY+P++ T++S
Sbjct: 1034 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093

Query: 408  LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
            L+D +C+  ++ +  +L   M  K   PNV ++  +I  LCK  ++++    L+Q+  N+
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153

Query: 468  LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             VP    +N +ID  CK   VD A  +   ++E  C P+ VT+  L+ G C   R  +A 
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 1213

Query: 528  SIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +  +M R  GC+PD IT N++I  L K    + A+++  +   D
Sbjct: 1214 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 218/414 (52%), Gaps = 5/414 (1%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY+ ++  LC+ G  D    +   M   G  PN       +    + G+ D A  LL + 
Sbjct: 985  TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 1044

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              G    +   Y  LL+A  K   A++A+ + +        P+ +T+N L+    +  EV
Sbjct: 1045 VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEV 1104

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++A +    M   GC P++V+YNT+I+GLC+  +V  G  LL+++   +   PD+VT+ +
Sbjct: 1105 ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM-LSNNCVPDIVTFNT 1163

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM-RERMLSF 396
            +I   CK  ++D A  ++N +   G  P+ VT+N L+ G  K      AEY+ RE     
Sbjct: 1164 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 1223

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            G  PD++T++++IDG C++ ++++  KL  +M    L+P+  T++I+I++LCK   +++A
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 1283

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               L+ +  N   P    Y  +IDGFCK GN+D+A  I+  +  K   PD VTF+I I  
Sbjct: 1284 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDW 1343

Query: 517  HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQR 567
               +GR+ +A  +   MLR G  PD +T N+L+       +  +A   F +M++
Sbjct: 1344 LSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 204/409 (49%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  L +    D    + + M  +G  PN       +    +A + + A  LL Q 
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y +++N L K +  DEA  +  +  +   QP+  T+  L+ G  R+G++
Sbjct: 292 VTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDL 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    M   G  P+ +TYN ++   CR N++ R H++L ++  ++   PD + Y++
Sbjct: 352 DGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVL-QMMIQTGCPPDAINYST 410

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG+CK GK+ +A  +  +M   G +P     + LID   K   + SA+ +    +   
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV +S LI   C+  +L +     D M      P+V T+  +++ LCK  R+NDA 
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +++   ++P    Y+ VI  FCK  N+D A  ++  M+E +C PD VT++ LI G 
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGL 590

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C  G + +A  +F +ML  GCAP+ +T N+LI  L K     +A  +++
Sbjct: 591 CKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 199/371 (53%), Gaps = 6/371 (1%)

Query: 208  DAAKGLLSQFRPGE-VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            DAA G        E     T+  N LL AL++     +A+ +++   +L   P+ +TF I
Sbjct: 825  DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTI 882

Query: 267  LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
            LI GL R G++  A+E   +M   G   +++ +N +I GLC   ++    EL KE++   
Sbjct: 883  LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 327  EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
               PDV TY++++    K GK+D A  +  +M S G  P+ VT++ L+ G  K G +  A
Sbjct: 943  SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002

Query: 387  EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
              + +RM   G  P++VT++++IDG+C+ G++++   L +EM      PNV T+T+L++A
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 1062

Query: 447  LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
             CK  +  DA   ++ +     VP  F YN ++D FCK   V+ A  +++ M +K C P+
Sbjct: 1063 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 1122

Query: 507  KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG---GMPNEAFR 563
             V++  +I G C   ++ E + +  +ML   C PD +T N++I  + K     +  E F 
Sbjct: 1123 VVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFN 1182

Query: 564  IMQRASEDQNL 574
            ++Q +    NL
Sbjct: 1183 LIQESGCTPNL 1193



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 222/449 (49%), Gaps = 4/449 (0%)

Query: 120 KLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF 179
           +LSP    +V++RL +P   L F E++       H     N ++  L +   +     +F
Sbjct: 90  QLSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLF 149

Query: 180 DYMRSDGHLPNSPMI-EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
              R +G      +     +S  IRAGK   A  L  +     +     ++ S+L  L  
Sbjct: 150 -RSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCD 208

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                +AV  F+E  +    PD+ T+N +I GLS+   +  A     +M   G +P++ +
Sbjct: 209 AGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFS 267

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YNT++ G C+ N V     LL+++  +    PDVV+YT+VI+G CKL ++D+A  + ++M
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQMVTRG-CPPDVVSYTTVINGLCKLDQVDEACRVMDKM 326

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G +P+ +T+  L+DGF +VG++  A  +  +M   GY P+ +T+++++  +CR   +
Sbjct: 327 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDM 386

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            +  ++   M      P+   ++ +I+  CK  +L +A   L+Q+      P     + +
Sbjct: 387 ERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTL 446

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           ID  CKA  +D A  ++       C PD V ++ILI   C   R+ EA S  + M++  C
Sbjct: 447 IDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRC 506

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQR 567
            PD +T NS++  L K    N+AF +  R
Sbjct: 507 YPDVVTYNSVVDGLCKSRRINDAFLLFDR 535



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 199/402 (49%), Gaps = 11/402 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           +Y  V+  LC++   D    V D M   G  PN       V    R G  D A  L+ + 
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               +RP  +T     YN++++   ++N+ + A  + +   +    PD   ++ +I G  
Sbjct: 362 TERGYRPNAIT-----YNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFC 416

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G++++A +    M   GC PD+   +TLI  LC+   +    ELL+ +    + +PDV
Sbjct: 417 KAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR-MSIGMDCAPDV 475

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           V Y+ +I   CK  ++ +A    + M      P  VT+N ++DG  K   +  A  + +R
Sbjct: 476 VAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDR 535

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M + G +PDVVT+S +I  +C++  L+   K+ + MK     P+V T++ LIN LCK   
Sbjct: 536 MRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGT 595

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++ A    +++      P    YN +IDG CK   V++A  ++  M ++ C PD +T+T 
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           LI G C   R+ EA  +  +M   GC PD +T  +L+  L K
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQK 697



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 186/360 (51%), Gaps = 1/360 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY +++ + C+ G  +    + + M   G++PN       +    +  + + A  LLS  
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   +   YN+++  L K     E V + ++       PD  TFN +I  + +   V
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
              A+E F  +   GC+P++VTYN+L+ GLC+     +   LL+E+  K   SPD++TY +
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            VI G CK  ++D+A  ++ +M S G+ P  VT++++I    K   M  A  + E ML  G
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + P  +T+ +LIDG+C+ G L++ L++   +  K   P+V TF+I I+ L K  RL  A 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              L+ +    LVP    YN ++ GFC A   ++A  +   M +  C+PD  T+T L +GH
Sbjct: 1355 ELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL-VGH 1413



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 218/486 (44%), Gaps = 17/486 (3%)

Query: 80   FDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTC---ARYLCEKLSP--------LNSLE 128
            F E E +  C  + +    +   L++S  + D C      + +  SP        L+ L 
Sbjct: 935  FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994

Query: 129  VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
               +LD     L+    +R   S N    TYN ++   C++G  D    + + M   G  
Sbjct: 995  KAGKLDEATALLQ--RMTRSGCSPN--IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ 1050

Query: 189  PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
            PN       + +  + GK + A GL+          + F YNSLL+   K++  + A  +
Sbjct: 1051 PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQL 1110

Query: 249  FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                 +    P+  ++N +I GL +  +V +       M S  C PDIVT+NT+I  +C+
Sbjct: 1111 LSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170

Query: 309  VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN-SCGIKPSA 367
               V   +EL   ++ +S  +P++VTY S++ G CK  + D+A  +  EM    G  P  
Sbjct: 1171 TYRVDIAYELFNLIQ-ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 1229

Query: 368  VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            +T+N +IDG  K   +  A  +  +MLS G  PD VT+S +I   C+   +++   + + 
Sbjct: 1230 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 1289

Query: 428  MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
            M      P   T+  LI+  CK   L+ A   L+ L      P    ++  ID   K G 
Sbjct: 1290 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR 1349

Query: 488  VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            + +A  ++  M      PD VT+  L+ G C      +A+ +F  M + GC PD+ T  +
Sbjct: 1350 LRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTT 1409

Query: 548  LISCLL 553
            L+  L+
Sbjct: 1410 LVGHLV 1415



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 168/347 (48%), Gaps = 11/347 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C     +    V   M   G  P++      +S   +AGK   A  LL Q 
Sbjct: 372 TYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM 431

Query: 218 -----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
                RP    +ST     L++AL K    D A  + +    +   PD   ++ILI  L 
Sbjct: 432 IRRGCRPDVACLST-----LIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALC 486

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   + +A  +   M    C PD+VTYN+++ GLC+   +     L   ++  +   PDV
Sbjct: 487 KAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR-AAGVMPDV 545

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY+ VI  +CK   +D A  +   M      P  VT++ LI+G  K G +  A  + + 
Sbjct: 546 VTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQE 605

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML  G  P++VT+++LIDG C+  ++ Q  ++ + M+ ++ +P+  T+T LIN LC  +R
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASR 665

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           L +A R L+++K    +P    Y  ++    K  N++    ++ EME
Sbjct: 666 LEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 205/441 (46%), Gaps = 33/441 (7%)

Query: 158  TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            +YN V+  LC+   +H+ V ++ + M S+  +P+       + +  +  + D A  L + 
Sbjct: 1125 SYNTVIAGLCKATKVHEGV-LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNL 1183

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIG 275
             +    T +   YNSL++ L K    D+A Y+ +E  R     PD  T+N +I GL +  
Sbjct: 1184 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 1243

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             V +A++ F  M S G +PD VTY+ +IS LC+   +   + +L E+  K+ F P  +TY
Sbjct: 1244 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL-ELMLKNGFDPGAITY 1302

Query: 336  TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             ++I G+CK G +DKA  I   + S G  P  VTF++ ID   K G +  A  + E ML 
Sbjct: 1303 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 1362

Query: 396  FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
             G +PD VT+++L+ G+C        + L + M+     P+  T+T L+  L  +    D
Sbjct: 1363 AGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 1422

Query: 456  ARRFLKQLKWNDLVPKPFMYN---------------------PVIDGFCKAGNVDEANVI 494
                L ++    +V   F  N                      ++D F K G+  +A  +
Sbjct: 1423 ---LLAEVS-KSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKV 1478

Query: 495  VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
               M+++    + V ++ ++  +    +  +A  ++  M   G  PD +T  SL++    
Sbjct: 1479 FEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCH 1534

Query: 555  GGMPNEAFRIMQRASEDQNLQ 575
             G+ + A       S D  L+
Sbjct: 1535 AGLLDAAVDEFVSISRDYGLE 1555



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 187/450 (41%), Gaps = 32/450 (7%)

Query: 142 FLEFSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           FL F R+  + +     TY++V+ S C+    DS   + + M+    +P+       ++ 
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALING 589

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             +AG  D A  +  +        +   YN+L++ L K N  ++A  M +   +    PD
Sbjct: 590 LCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPD 649

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
           + T+  LI GL     +++A+    +M   GC PD +TY TL+  L + N +    +LLK
Sbjct: 650 SITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLK 709

Query: 321 EVKFKSEFSPD---VVTYTSVISG----------YCKLGKMDKATGIYNEMNSCGIKPSA 367
           E++   E   +      +  VI G             L    +     ++      +P  
Sbjct: 710 EMEATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQ 769

Query: 368 --VTFNVLIDGFGK-----VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             VT      GF       + +  + EY    +  F           ++ G  RNG    
Sbjct: 770 YRVTAVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGV-RNGDAAL 828

Query: 421 G-LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP--FMYNP 477
           G        +G N   + YT   L+ AL +  R  DA     Q+  N L   P  F +  
Sbjct: 829 GFFDWATSQEGYN--HDTYTCNCLLQALLRLKRPKDAL----QVYRNKLCCSPNMFTFTI 882

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I G C+AG++  A  ++ EM       + +   ++I G C   ++  A+ +F +M   G
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 538 -CAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C PD  T ++++  L+K G  ++A R+++
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVE 972


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/424 (32%), Positives = 216/424 (50%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R+LC  G       +   MR  G  PN       V++  RAG+ D A+ L+   
Sbjct: 192 TYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 251

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G +  +   +NS++N + K    ++A  +F E  R    PD  ++N L+ G  + G  
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCS 311

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M   G  PD+VT+ +LI  +C+   + R   L+++++ +     + VT+T+
Sbjct: 312 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERG-LQMNEVTFTA 370

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK G +D A      M  C IKPS V +N LI+G+  VG M  A  +   M + G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+S++I  YC+N   +   +L  +M  K + P+  T++ LI  LC E RL+DA 
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +    L P  F Y  +IDG CK GNV+ A  +  +M +    PD VT+++LI G 
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC-----------LLKG----GMPNEAF 562
               R +EA  +  K+      P +   ++L+ C           LLKG    G+ NEA 
Sbjct: 551 SKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 610

Query: 563 RIMQ 566
           ++ Q
Sbjct: 611 KVYQ 614



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 177/328 (53%), Gaps = 2/328 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   YN++L AL    +   A   F         P+ +T+NIL++ L   G  K+A    
Sbjct: 155 SVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSIL 213

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            DM   GC P++VTYNTL++   R  EV  G E L  +  +    P++VT+ S+++G CK
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEV-DGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GKM+ A  +++EM   G+ P  V++N L+ G+ K G    A  +   M   G +PDVVT
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F+SLI   C+ G L + + L  +M+ + L  N  TFT LI+  CK+  L+DA   ++ +K
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    YN +I+G+C  G +DEA  ++ EME K  KPD VT++ +I  +C      
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCL 552
            A  +  +ML  G  PD IT +SLI  L
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVL 480



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 209/411 (50%), Gaps = 2/411 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   YN V+ +L +  L  S +  FD M SDG  PN       V +    G    A  +L
Sbjct: 155 SVLAYNAVLLALSDASL-TSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSIL 213

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              R      +   YN+L+ A  +    D A  +         +P+  TFN ++ G+ + 
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKA 273

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+++ A + F +M   G +PD V+YNTL+ G C+         +  E+  K    PDVVT
Sbjct: 274 GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG-IMPDVVT 332

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +TS+I   CK G +++A  +  +M   G++ + VTF  LIDGF K G +  A      M 
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                P VV +++LI+GYC  G++++  +L  EM+ K L P+V T++ +I+A CK    +
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    +Q+    ++P    Y+ +I   C    + +A+V+   M +   +PD+ T+T LI
Sbjct: 453 SAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            GHC +G +  A+S+ +KM++ G  PD +T + LI+ L K     EA +++
Sbjct: 513 DGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 210/431 (48%), Gaps = 16/431 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  +  T+N ++  +C+ G  +  + VFD M  +G  P+       V    +AG    A 
Sbjct: 256 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEAL 315

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + ++     +      + SL++ + K  N + AV + ++      Q +  TF  LI G 
Sbjct: 316 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGF 375

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G +  A      M      P +V YN LI+G C V  +    ELL E++ K    PD
Sbjct: 376 CKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG-LKPD 434

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTY+++IS YCK      A  +  +M   G+ P A+T++ LI        +  A  + +
Sbjct: 435 VVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFK 494

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G  PD  T++SLIDG+C+ G +   L L D+M    + P+V T+++LIN L K  
Sbjct: 495 NMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 554

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYN---------------PVIDGFCKAGNVDEANVIVA 496
           R  +A++ L +L   D +P    Y+                ++ GFC  G ++EA+ +  
Sbjct: 555 RAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQ 614

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M ++    D   +++LI GHC  G +++A+S   +ML+ G AP+  +  SLI  L + G
Sbjct: 615 SMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENG 674

Query: 557 MPNEAFRIMQR 567
           M  EA +++Q+
Sbjct: 675 MVVEADQVIQQ 685



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 171/312 (54%), Gaps = 2/312 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P    +N ++  LS    +  A  FF  M S G +P++ TYN L+  LC          +
Sbjct: 154 PSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L++++  +   P+VVTY ++++ + + G++D A  +   M   G+KP+ VTFN +++G  
Sbjct: 213 LRDMR-GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G M  A  + + M+  G  PD V++++L+ GYC+ G  ++ L +  EM  K + P+V 
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TFT LI+ +CK   L  A   ++Q++   L      +  +IDGFCK G +D+A + V  M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           ++ R KP  V +  LI G+CM GRM EA  + ++M   G  PD +T +++IS   K    
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 559 NEAFRIMQRASE 570
           + AF + Q+  E
Sbjct: 452 HSAFELNQQMLE 463



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 184/433 (42%), Gaps = 51/433 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++   C+ G       VF  M   G +P+       +    +AG  + A  L+ Q 
Sbjct: 297 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQM 356

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   + M+   + +L++   K+   D+A+   +   +   +P    +N LI G   +G +
Sbjct: 357 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRM 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E  ++M + G  PD+VTY+T+IS  C+  +     EL +++  K    PD +TY+S
Sbjct: 417 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL-PDAITYSS 475

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C   ++  A  ++  M   G++P   T+  LIDG  K GN+ SA  + ++M+  G
Sbjct: 476 LIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAG 535

Query: 398 YLPDVVTFSSLIDG---------------------------------------------- 411
            LPDVVT+S LI+G                                              
Sbjct: 536 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLA 595

Query: 412 ----YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
               +C  G +N+  K+   M  +N + +   +++LI+  C+   +  A  F KQ+    
Sbjct: 596 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGG 655

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P       +I G  + G V EA+ ++ ++       D      LI  +  +G +   +
Sbjct: 656 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVL 715

Query: 528 SIFNKMLRIGCAP 540
            + + M + G  P
Sbjct: 716 DVLHGMAKDGLLP 728



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 28/245 (11%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           KLGL+  EF            TY  ++   C+ G  +S   + D M   G LP+      
Sbjct: 498 KLGLQPDEF------------TYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSV 545

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN-----------ALVK----QNN 241
            ++   ++ +   A+ LL +    +   +   Y++L++           AL+K    +  
Sbjct: 546 LINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGL 605

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            +EA  +++         D   +++LI G  R G V KA  F   M   G +P+  +  +
Sbjct: 606 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTIS 665

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI GL     V    ++++++      + D     ++I      G +D    + + M   
Sbjct: 666 LIRGLFENGMVVEADQVIQQLLNYCSLA-DAEASKALIDLNLNEGNVDAVLDVLHGMAKD 724

Query: 362 GIKPS 366
           G+ PS
Sbjct: 725 GLLPS 729


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 209/387 (54%), Gaps = 44/387 (11%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +P  VT ST     LLN L  +    +AV +F E  ++  +PD  T++ +I GL ++G 
Sbjct: 43  LQPNHVTFST-----LLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGS 97

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A +    M   GC P++V Y+T+I  LC+   +    E L E+  +   SP+VVTY+
Sbjct: 98  TTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRG-ISPNVVTYS 156

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++ G+C LG+ ++AT ++ +M    + P  VTFN+L+DG  K G ++ A+ + E M+  
Sbjct: 157 SILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK 216

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKL----------------------------CDEM 428
           G  P+V T+++L+DGYC   Q+++  KL                             DE 
Sbjct: 217 GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA 276

Query: 429 KG-------KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           KG       K L+P+  T++ L+   C++ R  DA++ L++++   L+P    Y+ V+DG
Sbjct: 277 KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDG 336

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G++DEA  ++  M+E + +P+   +TILI G C  G++  A  +F+ +   G  PD
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396

Query: 542 DITVNSLISCLLKGGMPNEA---FRIM 565
            +T   +IS LLKGG+ NEA   FR M
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDM 423



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 192/391 (49%), Gaps = 1/391 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+MG       +   M   G  PN  +    + S  +      A   LS+ 
Sbjct: 84  TYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEM 143

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +   Y+S+L+       ++EA  +FK+       PDT TFNIL+ GLS+ G +
Sbjct: 144 VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMI 203

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  P++ TYN L+ G C  +++    +L   +  +   +P V +Y  
Sbjct: 204 LEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN-IMVRKGCAPSVRSYNI 262

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK G++D+A G+  EM+   + P  VT++ L+ GF + G    A+ + E M S+G
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG 322

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD++T+S ++DG C+ G L++  +L   M+   + PN++ +TILI  +C   +L  AR
Sbjct: 323 LLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAR 382

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    Y  +I G  K G  +EA  +  +M    C P+  T+ ++I G 
Sbjct: 383 ELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGF 442

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
              G    A  +  +M+  G + D  T   L
Sbjct: 443 LRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 195/362 (53%), Gaps = 10/362 (2%)

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK---EYFRLYSQPDTWTFNILIQG 270
           LS  RP   T++      L+N     N+ D   + F      F+L  QP+  TF+ L+ G
Sbjct: 3   LSNIRPDVYTLTI-----LINCFCHSNH-DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNG 56

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           LS   ++  A + F +M   G  PD++TY+T+I+GLC++       +LLK+++ K    P
Sbjct: 57  LSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG-CKP 115

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +VV Y+++I   CK   + +A    +EM + GI P+ VT++ ++ GF  +G    A  + 
Sbjct: 116 NVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLF 175

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           ++M+    +PD VTF+ L+DG  + G + +   + + M  K + PNV T+  L++  C +
Sbjct: 176 KQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQ 235

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           +++++A++    +      P    YN +I G CK+G +DEA  ++AEM  K   PD VT+
Sbjct: 236 SQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTY 295

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + L+ G C  GR  +A  +  +M   G  PD +T + ++  L K G  +EAF +++   E
Sbjct: 296 STLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQE 355

Query: 571 DQ 572
            +
Sbjct: 356 SK 357



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 199/395 (50%), Gaps = 2/395 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D+V++ FD M   G+ P+       ++   + G    A  LL +        +  +Y+++
Sbjct: 65  DAVKL-FDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           +++L K     EA+    E       P+  T++ ++ G   +G   +A   F  M     
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PD VT+N L+ GL +   +    + + E   +    P+V TY +++ GYC   +MD+A 
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEA-QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQ 242

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++N M   G  PS  ++N+LI G  K G +  A+ +   M      PD VT+S+L+ G+
Sbjct: 243 KLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGF 302

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C++G+     KL +EM+   L P++ T++I+++ LCK+  L++A   LK ++ + + P  
Sbjct: 303 CQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNI 362

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           F+Y  +I G C  G ++ A  + + +  K  +PD VT+T++I G    G   EA  +F  
Sbjct: 363 FIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRD 422

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           M   GC P+  T N +I   L+ G  + A R+++ 
Sbjct: 423 MAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEE 457



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 157/337 (46%), Gaps = 3/337 (0%)

Query: 129 VIKRLDNPKLGLKFLEF--SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           +I  L   KL  + +EF    VN  ++ +  TY+ ++   C +G  +    +F  M    
Sbjct: 123 IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
            +P++      V    + G    A+ +        V  +   YN+L++    Q+  DEA 
Sbjct: 183 VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQ 242

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F    R    P   ++NILI+G  + G + +A     +M     +PD VTY+TL+ G 
Sbjct: 243 KLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGF 302

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+        +LL+E++      PD++TY+ V+ G CK G +D+A  +   M    I+P+
Sbjct: 303 CQDGRPQDAQKLLEEMR-SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPN 361

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
              + +LI G    G + +A  +   +   G  PDVVT++ +I G  + G  N+  +L  
Sbjct: 362 IFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFR 421

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           +M      PN  T+ ++I    +    ++A R ++++
Sbjct: 422 DMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 1/258 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C     D  Q +F+ M   G  P+       +    ++G+ D AKGLL++ 
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEM 283

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T  T  Y++L+    +     +A  + +E       PD  T++I++ GL + G +
Sbjct: 284 SHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHL 343

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AFE    M      P+I  Y  LI G+C   ++    EL   + F     PDVVTYT 
Sbjct: 344 DEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNL-FVKGIQPDVVTYTV 402

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG  K G  ++A  ++ +M   G  P++ T+NV+I GF + G+  +A  + E M+  G
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462

Query: 398 YLPDVVTFSSLIDGYCRN 415
           +  D  TF  L D   R+
Sbjct: 463 FSADSSTFQMLSDLESRD 480


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 193/341 (56%), Gaps = 1/341 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L+ LVK+   D    ++ +     + P+  T+  LI G  R G+  KAF  F +M  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               P +V Y  LI GLC  + ++    + + ++  S   P++ TY +++ GYCK+  + 
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMR-NSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           KA  +Y EM   G+ P+ VTF +LIDG  K   MVSA      M SFG +P++  ++ LI
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DGYC+ G L++ L L  E++   + P+V+T++ILI  LC  +R+ +A   L+++K    +
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +IDG+CK GN+++A  + ++M EK  +P+ +TF+ LI G+C  G+M  A+ +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + +M+  G  PD +   +LI    K G   EAFR+ +   E
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 226/469 (48%), Gaps = 30/469 (6%)

Query: 114 ARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY-----------NLV 162
           +R  C   + L+ LE  K   N   G+  + FS + L     +  Y           N+V
Sbjct: 106 SRICCSVFNVLSRLESSKFTPNV-FGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMV 164

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +  L + G  D++  V+  M + G  PN       +  C R G    A  L  +    ++
Sbjct: 165 LDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKI 224

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
             +  +Y  L+  L  ++   EA  MF+        P+ +T+N ++ G  +I  VKKA E
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVIS 340
            + +M   G  P++VT+  LI GLC+ +E+    + L ++   + F   P++  Y  +I 
Sbjct: 285 LYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM---ASFGVVPNIFVYNCLID 341

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           GYCK G + +A  +++E+    I P   T+++LI G   V  M  A+ + + M   G+LP
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           + VT+++LIDGYC+ G + + +++C +M  K + PN+ TF+ LI+  CK  ++  A    
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++    L+P    Y  +IDG  K GN  EA  +  EM+E    P+  T + LI G C  
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 521 GRMVEAISIF-------------NKMLRIGCAPDDITVNSLISCLLKGG 556
           GR+ +AI +F             N++ R  C+P+ +   +LI  L   G
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 218/462 (47%), Gaps = 53/462 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C  G       +FD M      P   +    +       +   A+ +    
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + + YN++++   K  +  +A+ +++E       P+  TF ILI GL +  E+
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 278 KKAFEFFYDMGSFGCSP-----------------------------------DIVTYNTL 302
             A +F  DM SFG  P                                   D+ TY+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I GLC V+ +     LL+E+K K  F P+ VTY ++I GYCK G M+KA  + ++M   G
Sbjct: 375 IKGLCGVDRMEEADGLLQEMK-KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I+P+ +TF+ LIDG+ K G M +A  +   M+  G LPDVV +++LIDG+ ++G   +  
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDA-RRFLKQL-------KWNDL-----V 469
           +L  EM+   L PNV+T + LI+ LCK+ R++DA + FL +        K N+L      
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCS 553

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P   MY  +I G C  G + +A+   ++M     +PD  T  ++I GH     + + + +
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
              +L++G  P+    +S+   L KG   +   +   R SED
Sbjct: 614 QADILKMGIIPN----SSVYRVLAKGYEESGYLKSALRCSED 651



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 194/397 (48%), Gaps = 16/397 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C++        ++  M  DG LPN       +    +  +  +A+  L   
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  + F+YN L++   K  N  EA+ +  E  +    PD +T++ILI+GL  +  +
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     +M   G  P+ VTYNTLI G C+   + +  E+  ++  K    P+++T+++
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG-IEPNIITFST 443

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK GKM+ A G+Y EM   G+ P  V +  LIDG  K GN   A  + + M   G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKL-------------CDEMKGKNLSPNVYTFTILI 444
             P+V T S LIDG C++G+++  +KL              +E+     SPN   +T LI
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
             LC + R+  A +F   ++ + L P  F    +I G  +A ++ +  ++ A++ +    
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKM--LRIGCA 539
           P+   + +L  G+   G +  A+     +  + IGC+
Sbjct: 624 PNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCS 660



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 143/284 (50%), Gaps = 35/284 (12%)

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           V +K +  P +     V+ G  K G+ D    +Y +M + G  P+ VT+  LIDG  + G
Sbjct: 148 VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQG 207

Query: 382 NMV-----------------------------------SAEYMRERMLSFGYLPDVVTFS 406
           + +                                    AE M   M + G LP++ T++
Sbjct: 208 DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYN 267

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +++DGYC+   + + L+L  EM G  L PNV TF ILI+ LCK + +  AR+FL  +   
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF 327

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            +VP  F+YN +IDG+CKAGN+ EA  + +E+E+    PD  T++ILI G C   RM EA
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +  +M + G  P+ +T N+LI    K G   +A  +  + +E
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           R+ S  + P+V  F  LI  +   G + + L +  +M   ++ P +    ++++ L K+ 
Sbjct: 118 RLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKG 172

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R +   +    +      P    Y  +IDG C+ G+  +A  +  EM EK+  P  V +T
Sbjct: 173 RFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYT 232

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           ILI G C + R+ EA S+F  M   G  P+  T N+++    K     +A  + Q    D
Sbjct: 233 ILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGD 292


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 193/341 (56%), Gaps = 1/341 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L+ LVK+   D    ++ +     + P+  T+  LI G  R G+  KAF  F +M  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               P +V Y  LI GLC  + ++    + + ++  S   P++ TY +++ GYCK+  + 
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMR-NSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           KA  +Y EM   G+ P+ VTF +LIDG  K   MVSA      M SFG +P++  ++ LI
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DGYC+ G L++ L L  E++   + P+V+T++ILI  LC  +R+ +A   L+++K    +
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +IDG+CK GN+++A  + ++M EK  +P+ +TF+ LI G+C  G+M  A+ +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + +M+  G  PD +   +LI    K G   EAFR+ +   E
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 226/469 (48%), Gaps = 30/469 (6%)

Query: 114 ARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY-----------NLV 162
           +R  C   + L+ LE  K   N   G+  + FS + L     +  Y           N+V
Sbjct: 106 SRICCSVFNVLSRLESSKFTPNV-FGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMV 164

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +  L + G  D++  V+  M + G  PN       +  C R G    A  L  +    ++
Sbjct: 165 LDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKI 224

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
             +  +Y  L+  L  ++   EA  MF+        P+ +T+N ++ G  +I  VKKA E
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVIS 340
            + +M   G  P++VT+  LI GLC+ +E+    + L ++   + F   P++  Y  +I 
Sbjct: 285 LYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM---ASFGVVPNIFVYNCLID 341

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           GYCK G + +A  +++E+    I P   T+++LI G   V  M  A+ + + M   G+LP
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           + VT+++LIDGYC+ G + + +++C +M  K + PN+ TF+ LI+  CK  ++  A    
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++    L+P    Y  +IDG  K GN  EA  +  EM+E    P+  T + LI G C  
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 521 GRMVEAISIF-------------NKMLRIGCAPDDITVNSLISCLLKGG 556
           GR+ +AI +F             N++ R  C+P+ +   +LI  L   G
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 211/446 (47%), Gaps = 53/446 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C  G       +FD M      P   +    +       +   A+ +    
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + + YN++++   K  +  +A+ ++ E       P+  TF ILI GL +  E+
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 278 KKAFEFFYDMGSFGCSP-----------------------------------DIVTYNTL 302
             A +F  DM SFG  P                                   D+ TY+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I GLC V+ +     LL+E+K K  F P+ VTY ++I GYCK G M+KA  + ++M   G
Sbjct: 375 IKGLCGVDRMEEADGLLQEMK-KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I+P+ +TF+ LIDG+ K G M +A  +   M+  G LPDVV +++LIDG+ ++G   +  
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDA-RRFLKQL-------KWNDL-----V 469
           +L  EM+   L PNV+T + LI+ LCK+ R++DA + FL +        K N+L      
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCS 553

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P   MY  +I G C  G + +A+   ++M     +PD  T  ++I GH     + + + +
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKG 555
              +L++G  P+    +S+   L KG
Sbjct: 614 QADILKMGIIPN----SSVYRVLAKG 635



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 189/384 (49%), Gaps = 14/384 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C++        ++  M  DG LPN       +    +  +  +A+  L   
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  + F+YN L++   K  N  EA+ +  E  +    PD +T++ILI+GL  +  +
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     +M   G  P+ VTYNTLI G C+   + +  E+  ++  K    P+++T+++
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG-IEPNIITFST 443

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK GKM+ A G+Y EM   G+ P  V +  LIDG  K GN   A  + + M   G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKL-------------CDEMKGKNLSPNVYTFTILI 444
             P+V T S LIDG C++G+++  +KL              +E+     SPN   +T LI
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
             LC + R+  A +F   ++ + L P  F    +I G  +A ++ +  ++ A++ +    
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623

Query: 505 PDKVTFTILIIGHCMKGRMVEAIS 528
           P+   + +L  G+   G +  A+S
Sbjct: 624 PNSSVYRVLAKGYEESGYLKSALS 647



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 143/284 (50%), Gaps = 35/284 (12%)

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           V +K +  P +     V+ G  K G+ D    +Y +M + G  P+ VT+  LIDG  + G
Sbjct: 148 VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQG 207

Query: 382 NMV-----------------------------------SAEYMRERMLSFGYLPDVVTFS 406
           + +                                    AE M   M + G LP++ T++
Sbjct: 208 DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYN 267

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +++DGYC+   + + L+L  EM G  L PNV TF ILI+ LCK + +  AR+FL  +   
Sbjct: 268 TMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF 327

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            +VP  F+YN +IDG+CKAGN+ EA  + +E+E+    PD  T++ILI G C   RM EA
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +  +M + G  P+ +T N+LI    K G   +A  +  + +E
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 14/283 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+++++ LC +   +    +   M+  G LPN+      +    + G  + A  + SQ 
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   +++L++   K    + A+ ++ E       PD   +  LI G  + G  
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL-------------KEVKF 324
           K+AF    +M   G  P++ T + LI GLC+   ++   +L               E+  
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD- 548

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +S  SP+ V YT++I G C  G++ KA+  +++M   G++P   T  V+I G  +  ++ 
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLR 608

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
               ++  +L  G +P+   +  L  GY  +G L   L  C E
Sbjct: 609 DVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 141/355 (39%), Gaps = 59/355 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA-----AKG 212
           T+ +++  LC+     S +     M S G +PN      FV +C+  G C A     A  
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPN-----IFVYNCLIDGYCKAGNLSEALS 354

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L S+    E+    F Y+ L+  L   +  +EA  + +E  +    P+  T+N LI G  
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G ++KA E    M   G  P+I+T++TLI G C+  ++     L  E+  K    PDV
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG-LLPDV 473

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF---GKV--------- 380
           V YT++I G+ K G   +A  ++ EM   G+ P+  T + LIDG    G++         
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533

Query: 381 ------------------------------------GNMVSAEYMRERMLSFGYLPDVVT 404
                                               G +  A      M   G  PDV T
Sbjct: 534 KTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
              +I G+ R   L   + L  ++    + PN   + +L     +   L  A  F
Sbjct: 594 CIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSF 648



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/468 (19%), Positives = 175/468 (37%), Gaps = 58/468 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++   C+ G  ++   ++  M   G LP+       +    + G    A  L  + 
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMF-------------KEYFRLYSQPDTWTF 264
           +   +  + F  + L++ L K     +A+ +F              E  R    P+   +
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMY 559

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
             LIQGL   G + KA +FF DM   G  PD+ T   +I G  R   + R   +L+    
Sbjct: 560 TALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHL-RDVMMLQADIL 618

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE-------MNS--------------CGI 363
           K    P+   Y  +  GY + G +  A     E       +NS              C +
Sbjct: 619 KMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVV 678

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
                  +  +  FG + + V   Y    +      P  +       G   + + N+ L+
Sbjct: 679 TEKKECHSSYLTAFG-IHSFVLLWYFHTILKPPS--PHEILKKVPFIGQKGDQRPNKALQ 735

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  +M+  +  P++ T T+ ++A      L+        ++   L     + N +I+ + 
Sbjct: 736 LFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYS 795

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG------ 537
           K G +  A  +    ++K    D  T+T +I+GH + G+  EA+ +F +M          
Sbjct: 796 KCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKN 851

Query: 538 ----------CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
                       P+D+T   ++      G+  E  +  +   ED +L+
Sbjct: 852 KRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLR 899



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 44/243 (18%)

Query: 316 HELLKEVKF--------------------KSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           HE+LK+V F                      +  PD+VT T  +S    LG +D    I+
Sbjct: 713 HEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIH 772

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
             +   G+       N LI+ + K G + +A     R+       DV T++S+I G+  +
Sbjct: 773 AYIRHRGLDTDLCLNNSLINMYSKCGEIGTA----RRLFDGTQKKDVTTWTSMIVGHALH 828

Query: 416 GQLNQGLKLCDEMKGKN----------------LSPNVYTFTILINALCKENRLNDARRF 459
           GQ  + L+L  EMK  N                + PN  TF  ++ A      + + ++ 
Sbjct: 829 GQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQH 888

Query: 460 LKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            + +K +  L P+   +  ++D  C+AG + EA   + +M     +P+ V +  L+    
Sbjct: 889 FRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLLGACS 945

Query: 519 MKG 521
           ++G
Sbjct: 946 LQG 948



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 53/280 (18%), Positives = 111/280 (39%), Gaps = 36/280 (12%)

Query: 178  VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            +F  M+ D   P+   +   +S+C   G  D  + + +  R   +     + NSL+N   
Sbjct: 736  LFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYS 795

Query: 238  KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM---------- 287
            K      A    +  F    + D  T+  +I G +  G+ ++A + F +M          
Sbjct: 796  KCGEIGTA----RRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKN 851

Query: 288  ---GSFGCS---PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               G    S   P+ VT+  ++        V  G +  + +K      P +  +  ++  
Sbjct: 852  KRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDL 911

Query: 342  YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI---------DGFGKVGNMVSAEYMRER 392
             C+ G + +A   Y  +    ++P+AV +  L+         +G G     + +E  R+ 
Sbjct: 912  LCRAGLLTEA---YEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSEARRQL 968

Query: 393  M-LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            + L   ++ D V  S+L   Y   G  ++ + + +++K +
Sbjct: 969  LELEPSHVGDNVIMSNL---YAAKGMWDKKMLVRNQIKQR 1005


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 223/421 (52%), Gaps = 13/421 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           +Y  V+  LC++   D    V D M   G  PN       V    R G  D A  L+ + 
Sbjct: 116 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 175

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGL 271
               +RP  +T     YN++++ L      D A+ +FKE     S  PD +T++ ++  L
Sbjct: 176 TERGYRPNAIT-----YNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSL 230

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G+V  A      M S GCSP++VTY++L+ GLC+  ++     LL+ +  +S  SP+
Sbjct: 231 VKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT-RSGCSPN 289

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +VTY ++I G+CKLG++D+A  +  EM   G +P+ VT+ VL+D F K G    A  + E
Sbjct: 290 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  GY+P++ T++SL+D +C+  ++ +  +L   M  K   PNV ++  +I  LCK  
Sbjct: 350 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 409

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++++    L+Q+  N+ VP    +N +ID  CK   VD A  +   ++E  C P+ VT+ 
Sbjct: 410 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 469

Query: 512 ILIIGHCMKGRMVEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            L+ G C   R  +A  +  +M R  GC+PD IT N++I  L K    + A+++  +   
Sbjct: 470 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 529

Query: 571 D 571
           D
Sbjct: 530 D 530



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 217/414 (52%), Gaps = 5/414 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+ G  D    +   M   G  PN       +    + G+ D A  LL + 
Sbjct: 257 TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 316

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G    +   Y  LL+A  K   A++A+ + +        P+ +T+N L+    +  EV
Sbjct: 317 VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEV 376

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M   GC P++V+YNT+I+GLC+  +V  G  LL+++   +   PD+VT+ +
Sbjct: 377 ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM-LSNNCVPDIVTFNT 435

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM-RERMLSF 396
           +I   CK  ++D A  ++N +   G  P+ VT+N L+ G  K      AEY+ RE     
Sbjct: 436 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 495

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD++T++++IDG C++ ++++  KL  +M    L+P+  T++I+I++LCK   +++A
Sbjct: 496 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 555

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L+ +  N   P    Y  +IDGFCK GN+D+A  I+  +  K   PD VTF+I I  
Sbjct: 556 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDW 615

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQR 567
              +GR+ +A  +   MLR G  PD +T N+L+          +A   F +M++
Sbjct: 616 LSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQ 669



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 212/420 (50%), Gaps = 3/420 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  L +    D    + + M  +G  PN       +    +A + + A  LL Q 
Sbjct: 46  TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 105

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y +++N L K +  DEA  +  +  +   QP+  T+  L+ G  R+G++
Sbjct: 106 VMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDL 165

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    M   G  P+ +TYN ++ GLC   ++    +L KE++      PDV TY++
Sbjct: 166 DGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYST 225

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++    K GK+D A  +   M S G  P+ VT++ L+ G  K G +  A  + +RM   G
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 285

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++VT++++IDG+C+ G++++   L +EM      PNV T+T+L++A CK  +  DA 
Sbjct: 286 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAI 345

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++ +     VP  F YN ++D FCK   V+ A  +++ M +K C P+ V++  +I G 
Sbjct: 346 GLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 405

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG---GMPNEAFRIMQRASEDQNL 574
           C   ++ E + +  +ML   C PD +T N++I  + K     +  E F ++Q +    NL
Sbjct: 406 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 465



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 186/360 (51%), Gaps = 1/360 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ + C+ G  +    + + M   G++PN       +    +  + + A  LLS  
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+++  L K     E V + ++       PD  TFN +I  + +   V
Sbjct: 387 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+E F  +   GC+P++VTYN+L+ GLC+     +   LL+E+  K   SPD++TY +
Sbjct: 447 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 506

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G CK  ++D+A  ++ +M S G+ P  VT++++I    K   M  A  + E ML  G
Sbjct: 507 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 566

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P  +T+ +LIDG+C+ G L++ L++   +  K   P+V TF+I I+ L K  RL  A 
Sbjct: 567 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 626

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +    LVP    YN ++ GFC A   ++A  +   M +  C+PD  T+T L +GH
Sbjct: 627 ELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTL-VGH 685



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 231/517 (44%), Gaps = 27/517 (5%)

Query: 54  RPSRVRASTIAAIAHFHGLANG-----GSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSY 108
           RP+ +  + I      HGL +G       + F E E +  C  + +    +   L++S  
Sbjct: 181 RPNAITYNNI-----MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGK 235

Query: 109 LSDTC---ARYLCEKLSP--------LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFK 157
           + D C      + +  SP        L+ L    +LD     L+    +R   S N    
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ--RMTRSGCSPN--IV 291

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C++G  D    + + M   G  PN       + +  + GK + A GL+   
Sbjct: 292 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 351

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + F YNSLL+   K++  + A  +     +    P+  ++N +I GL +  +V
Sbjct: 352 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 411

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +       M S  C PDIVT+NT+I  +C+   V   +EL   ++ +S  +P++VTY S
Sbjct: 412 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ-ESGCTPNLVTYNS 470

Query: 338 VISGYCKLGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++ G CK  + D+A  +  EM    G  P  +T+N +IDG  K   +  A  +  +MLS 
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 530

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD VT+S +I   C+   +++   + + M      P   T+  LI+  CK   L+ A
Sbjct: 531 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 590

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L+ L      P    ++  ID   K G + +A  ++  M      PD VT+  L+ G
Sbjct: 591 LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG 650

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
            C   R  +A+ +F  M + GC PD+ T  +L+  L+
Sbjct: 651 FCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV 687



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 155/300 (51%), Gaps = 4/300 (1%)

Query: 158 TYNLVMRSLCE-MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN V+  LC+   +H+ V ++ + M S+  +P+       + +  +  + D A  L + 
Sbjct: 397 SYNTVIAGLCKATKVHEGV-LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNL 455

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIG 275
            +    T +   YNSL++ L K    D+A Y+ +E  R     PD  T+N +I GL +  
Sbjct: 456 IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSK 515

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V +A++ F  M S G +PD VTY+ +IS LC+   +   + +L E+  K+ F P  +TY
Sbjct: 516 RVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL-ELMLKNGFDPGAITY 574

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I G+CK G +DKA  I   + S G  P  VTF++ ID   K G +  A  + E ML 
Sbjct: 575 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 634

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G +PD VT+++L+ G+C   +    + L + M+     P+  T+T L+  L  +    D
Sbjct: 635 AGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 694


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 222/411 (54%), Gaps = 7/411 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN+V+   C  G LH ++++  + M+S G  P++      +++   AG  D   G +  
Sbjct: 114 SYNIVISGFCNAGDLHAALEL-LEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDH 169

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R      +   Y +L+ A  +    +EA+ + +E       P+  T+N+L+  L ++  
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A +    M   G +P+++T+N+L+ G C+   V    +LL  +       P+VVTY+
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG-IMVAKGMRPNVVTYS 288

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G CK  K  +A  +  EM + G+ P A T++ LI G  K   +  AE M  RM   
Sbjct: 289 ALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 348

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDVV +SS+I  +C++G+L +  K   EM+ +  SP+V T+  +I+ LCK  ++ +A
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 408

Query: 457 RRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           +  L+Q++ + D++P    Y+ VI+G CK+  + EA  ++  M +  C PD VT+T +I 
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           G C  GR+ EA  +   M R GCAP+ +T  +LIS L K    +EA R+M+
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 519



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 215/413 (52%), Gaps = 4/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ +       +    + + MR  G  PN       V +  +     AA+ ++ + 
Sbjct: 181 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G    +   +NSL++   K+ N D+A  +         +P+  T++ LI GL +  + 
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 300

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E   +M + G +PD  TY+ LI GLC+ +++    ++L+ +   S  +PDVV Y+S
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA-GSGCTPDVVVYSS 359

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK GK+ +A     EM      P  VT+N +IDG  K+G +  A+ + E+M   G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419

Query: 398 -YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             LPDVVT+S++I+G C++  L +  KL D M     +P+V T+T +I+ LCK  RL +A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L+ +K     P    Y  +I G CKA  VDEA  ++ EM    C P+ VT+  ++ G
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539

Query: 517 HCMKGRMVEAISIFNKML--RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C+ GR+ EA  +  +M   R  C+PD  T  ++++ L+   +  EA +++++
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 592



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 204/370 (55%), Gaps = 9/370 (2%)

Query: 210 AKGLLSQFR--PGEV---TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           AK  L+ FR  P  +   + + F +NSLL  LV+     EA  +F+       +PD  ++
Sbjct: 56  AKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSY 115

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           NI+I G    G++  A E   +M S G +PD  T+  +I+ +    ++    + L+ +  
Sbjct: 116 NIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC 175

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
                P+VVTYT++I+ + +  K+++A  +  EM   G  P+ VT+NVL+D   K+  + 
Sbjct: 176 ----DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVG 231

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
           +A+ + ++M+  G+ P+V+TF+SL+DG+C+ G ++   KL   M  K + PNV T++ LI
Sbjct: 232 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           + LCK  +  +A+  L+++K   + P  F Y+ +I G CKA  ++EA  ++  M    C 
Sbjct: 292 DGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD V ++ +I   C  G+++EA     +M +   +PD +T N++I  L K G   EA  I
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 411

Query: 565 MQRASEDQNL 574
           +++  E  ++
Sbjct: 412 LEQMQESGDV 421



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 182/344 (52%), Gaps = 2/344 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C+ G  D  + +   M + G  PN       +    ++ K   AK +L + 
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   VT   F Y++L++ L K +  +EA  M +        PD   ++ +I    + G++
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M     SPD+VTYNT+I GLC++ ++A    +L++++   +  PDVVTY++
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G CK   + +A  + + M   G  P  VT+  +IDG  K G +  AEY+ + M   G
Sbjct: 431 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 490

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT+++LI G C+  ++++  ++ +EM+     PN+ T+  ++N LC   R+ +A+
Sbjct: 491 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 550

Query: 458 RFLKQLK--WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + ++++K    +  P    Y  +++    +  V EA  ++ +M+
Sbjct: 551 QLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 37/173 (21%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N    TY  ++  LC+ G  +  + +   M+  G  PN       +S   +A K D A+ 
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 516

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           ++ + R      +   YN+++N                                   GL 
Sbjct: 517 VMEEMRNAGCPPNLVTYNTMVN-----------------------------------GLC 541

Query: 273 RIGEVKKAFEFFYDM--GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
             G +K+A +    M  G   CSPD  TY T+++ L   + V    +LL+++K
Sbjct: 542 VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 5/129 (3%)

Query: 451 NRLNDARRFLKQLKWNDL-VP----KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           N L DA+  L   +W    +P      F +N ++    +     EA  +        C+P
Sbjct: 51  NSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEP 110

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  ++ I+I G C  G +  A+ +  +M   G APD  T   +I+ +   G  + A   +
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL 170

Query: 566 QRASEDQNL 574
           +    D N+
Sbjct: 171 RSMGCDPNV 179


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 225/458 (49%), Gaps = 51/458 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN ++ + C+MG  D    +   M S G  PN       ++   R G    A  +L + 
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310

Query: 217 ----FRPGEVTMSTFM------------------------------YNSLLNALVKQNNA 242
               F P EVT +T +                              Y +L+N++ K  N 
Sbjct: 311 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           + A+  F +      +P+  T+  LI G SR G + +A+    +M   G SP +VTYN  
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G C +  +     +++E+  K   +PDVV+Y+++ISG+C+ G++D+A  +  EM   G
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKG-LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P AVT++ LI G  ++  +  A  + + ML  G  PD  T+++LI+ YC  G LN+ L
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID-- 480
            L DEM  K   P+  T+++LIN L K+ R  +A+R L +L + + VP    Y+ +I+  
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 609

Query: 481 -------------GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
                        GFC  G + EA+ +   M E+  KP +  + ++I GHC  G + +A 
Sbjct: 610 SNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 669

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +++ +M+  G  P  +TV +LI  L K GM  E   ++
Sbjct: 670 NLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 707



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 245/501 (48%), Gaps = 33/501 (6%)

Query: 90  SNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSR-- 147
           S+     K +  L     +L    +R+  +  S      ++K   +  L LKFL ++R  
Sbjct: 29  SHALLVDKAITLLKFHPHHLDSLSSRFTPQSASYF----LLKSQFDQTLTLKFLTWARNH 84

Query: 148 ---------VNLSLNHSFKTYNLVMRSLCEMGLHDS---VQVVFDYMRSDGHLPNS--PM 193
                    ++L +   FK Y        E+ L  S      +F  ++   H+ NS   +
Sbjct: 85  PFFDSHCKCLSLHILTRFKLYKTAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAV 144

Query: 194 IEFFVSSCIRAGKCDAAKGLL-----SQFRPGEVTMSTFMYNSLLNALVKQNNADE--AV 246
            +  V S       D A   +     S F PG ++     YNS+L+A+V+   + +  A 
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLS-----YNSVLDAIVRSRGSVKLSAE 199

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +++E  R    P+ +T+NILI+G   +GE++K    F +M   GC P++VTYNTLI   
Sbjct: 200 EVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAY 259

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C++  +     LLK +  K    P++++Y  +I+G C+ G M +A  I  EM   G  P 
Sbjct: 260 CKMGRIDEAFGLLKSMSSKG-MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 318

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT+N L++G+ K GN   A  +   M+  G  P VVT+++LI+  C+   LN+ ++  D
Sbjct: 319 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 378

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +M+ + L PN  T+T LI+   ++  LN+A R L ++  +   P    YN  I G C   
Sbjct: 379 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 438

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            ++EA  +V EM EK   PD V+++ +I G C KG +  A  +  +M+  G +PD +T +
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 498

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
           SLI  L +     EA  + Q 
Sbjct: 499 SLIQGLCEMRRLTEACDLSQE 519



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/314 (36%), Positives = 185/314 (58%), Gaps = 3/314 (0%)

Query: 259 PDTWTFNILIQGLSRI-GEVK-KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           P   ++N ++  + R  G VK  A E + +M     SP++ TYN LI G C V E+ +G 
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
               E++ ++   P+VVTY ++I  YCK+G++D+A G+   M+S G++P+ +++NV+I+G
Sbjct: 235 GCFGEME-RNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIING 293

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             + G+M  A  + E M   G+ PD VT+++L++GYC+ G  +Q L +  EM    +SP+
Sbjct: 294 LCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPS 353

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           V T+T LIN++CK   LN A  F  Q++   L P    Y  +IDGF + G ++EA  I+ 
Sbjct: 354 VVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILN 413

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM E    P  VT+   I GHC+  RM EA+ +  +M+  G APD ++ +++IS   + G
Sbjct: 414 EMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 473

Query: 557 MPNEAFRIMQRASE 570
             + AF++ Q   E
Sbjct: 474 ELDRAFQMKQEMVE 487



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 215/428 (50%), Gaps = 16/428 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R  C +G        F  M  +G LPN       + +  + G+ D A GLL   
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN ++N L ++ +  EA  + +E       PD  T+N L+ G  + G  
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 335

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   G SP +VTY  LI+ +C+   + R  E   +++ +    P+  TYT+
Sbjct: 336 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG-LRPNERTYTT 394

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ + G +++A  I NEM   G  PS VT+N  I G   +  M  A  + + M+  G
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV++S++I G+CR G+L++  ++  EM  K +SP+  T++ LI  LC+  RL +A 
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++    L P  F Y  +I+ +C  G++++A  +  EM  K   PD VT+++LI G 
Sbjct: 515 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 574

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS-----------CLLKG----GMPNEAF 562
             + R  EA  +  K++     P D+T ++LI             L+KG    G+ +EA 
Sbjct: 575 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 634

Query: 563 RIMQRASE 570
           R+ +   E
Sbjct: 635 RVFESMVE 642


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 236/456 (51%), Gaps = 16/456 (3%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           ++R   P L ++F +++       H   +YN ++  L + G       V+  +   G  P
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSP 60

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N    +  +    +AG+   A   L       V    +++N L++ L K  N D+AV +F
Sbjct: 61  NLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLF 120

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLI-SGL 306
           +        PD +T+N +I GL + G ++KA E   +M   G   +PDIVTYNTLI +G+
Sbjct: 121 ENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGI 180

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+  +V    E+L  +K     +PDV+TY S+I   C  G++ +A  I   M SC   P 
Sbjct: 181 CKDGDVEEALEILDGMKLAGP-APDVITYNSIIHALCVAGRVVEAAEILKTM-SC--SPD 236

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VTFN L+DGF K G +  A  + E M     LPDV+T++ L++G CR GQ+     L +
Sbjct: 237 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE 296

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND---------LVPKPFMYNP 477
           E+  +   P+V  +T L++ LCK   + +A + +K++   +         +VP  F YN 
Sbjct: 297 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNI 356

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           V+ G  K G++ +A  +++++  +   PD VT+  LI G C   R+ EA  + ++M  +G
Sbjct: 357 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLG 416

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           C P+D+T+ S++  L + G  ++A+ ++   S  ++
Sbjct: 417 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 452



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 231/459 (50%), Gaps = 36/459 (7%)

Query: 135 NPKLGLKF---LEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPN 190
           NP   +K    +E SRVN  +     TYN V+  LC+ G L  + +++ + +R  G   +
Sbjct: 112 NPDQAVKLFENMESSRVNPDIF----TYNTVISGLCKSGNLEKARELLEEMIRRGGK--S 165

Query: 191 SPMIEFFVSSCIRAGKC-----DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           +P I  + ++ I AG C     + A  +L   +          YNS+++AL       EA
Sbjct: 166 APDIVTY-NTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEA 224

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             + K    +   PD  TFN L+ G  + G + +A E   +M      PD++TY  L++G
Sbjct: 225 AEILKT---MSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 281

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN------ 359
           LCRV +V     LL+E+  +  + PDV+ YTS++ G CK G++++A  +  EM+      
Sbjct: 282 LCRVGQVQVAFYLLEEI-VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILA 340

Query: 360 ---SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
              S  + P   T+N+++ G  K G++  A  +   +++ GY+PDVVT+++LIDG C+  
Sbjct: 341 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKAN 400

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++ +   L DEM      PN  T   ++  LC+  R++DA   + ++      P   +Y 
Sbjct: 401 RVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYT 460

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +IDG CK+  +D+A V++  M  +    D   +  LI+     GR+ EA++++++M+  
Sbjct: 461 SLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVAR 520

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFR---IMQRASEDQ 572
           G  PD  T  +    L +  M N  F    + + AS D+
Sbjct: 521 GFLPDGSTSKT----LEEAAMSNSVFEWTNLEENASSDR 555


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 215/418 (51%), Gaps = 9/418 (2%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           YN+V++SLC  G    ++++    M  DG  P        ++   ++    A   L  + 
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN+L+++L K  + +EA  +  +       P+  T+++LI GL ++G +
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 278 KKAFEFFYDMGSFGCS--PDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVT 334
            +A E   +M    C   P+I+TYN+ + GLC+ +  A   EL++ ++  S   SPD VT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           ++++I G CK G++D+A  ++++M + G  P+ +T+N L++G  K   M  A  M E M+
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY-----TFTILINALCK 449
             G  PDV+T+S L+D +C+  ++++ L+L   M  +  +PNV      TF ILI   CK
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
                 A    +++   +L P    +  +IDG CKAG V+ A  I+  M      P+ VT
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  L+ G C  GR+ EA     +M+  GC PD IT  SL+  L +    ++A +++  
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 220/443 (49%), Gaps = 45/443 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ SLC+ G  +  + +   M S G +PN       ++   + G+ D A+ L+ + 
Sbjct: 74  TYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 133

Query: 218 --RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY--FRLYSQPDTWTFNILIQGLSR 273
             +  +V  +   YNS L+ L KQ+   EA  + +      L   PDT TF+ LI GL +
Sbjct: 134 TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 193

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G++ +A   F DM + G  P+++TYN L++GLC+ +++ R H +++ +  K   +PDV+
Sbjct: 194 CGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG-VTPDVI 252

Query: 334 TYTSV----------------------------------------ISGYCKLGKMDKATG 353
           TY+ +                                        I+G CK G  ++A+ 
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASA 312

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           ++ EM +  ++P  +TF  LIDG  K G + +A  + + M + G  P+VVT+++L+ G C
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           ++G++ +  +  +EM      P+  T+  L+ ALC+ +R +DA + + +LK     P   
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN ++DG  K+G  ++A  ++ EM  K  +PD  TF     G    G +   + +   +
Sbjct: 433 TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVV 492

Query: 534 LRIGCAPDDITVNSLISCLLKGG 556
           L  G  PD  T +S++  + + G
Sbjct: 493 LAKGMLPDATTCSSILDWVCRSG 515



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 193/408 (47%), Gaps = 12/408 (2%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +N L  + R+D  +  ++  E +R +  +  +  TYN  +  LC+  +      +   +R
Sbjct: 114 INGLCKVGRIDEARELIQ--EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 171

Query: 184 SDGHL---PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
            DG L   P++      +    + G+ D A  +      G    +   YN+L+N L K +
Sbjct: 172 -DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 230

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI---- 296
             + A  M +        PD  T+++L+    +   V +A E  + M S GC+P++    
Sbjct: 231 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPD 290

Query: 297 -VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
            VT+N LI+G C+     +   L +E+  K+   PDV+T+ ++I G CK G+++ A  I 
Sbjct: 291 KVTFNILIAGACKAGNFEQASALFEEMVAKN-LQPDVMTFGALIDGLCKAGQVEAARDIL 349

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           + M + G+ P+ VT+N L+ G  K G +  A    E M+S G +PD +T+ SL+   CR 
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            + +  L+L  E+K     P+  T+ IL++ L K  +   A   L+++      P  F +
Sbjct: 410 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                G  ++GN+     ++  +  K   PD  T + ++   C  G++
Sbjct: 470 AACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKL 517



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 170/347 (48%), Gaps = 6/347 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++  LC+ G  D    VFD M + G++PN       V+   +A K + A  ++   
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP-----DTWTFNILIQGLS 272
               VT     Y+ L++A  K +  DEA+ +          P     D  TFNILI G  
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G  ++A   F +M +    PD++T+  LI GLC+  +V    ++L ++       P+V
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL-DLMGNLGVPPNV 361

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY +++ G CK G++++A     EM S G  P ++T+  L+    +      A  +   
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           + SFG+ PD VT++ L+DG  ++G+  Q + + +EM GK   P+ +TF    + L +   
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           L      L+ +    ++P     + ++D  C++G +D+   ++ E E
Sbjct: 482 LAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 143/275 (52%), Gaps = 4/275 (1%)

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +  YN ++  LCR  + AR  E+ +    +   +P +VTY ++I+G CK   +     ++
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            E+   G  P  VT+N LID   K G++  A  +   M S G +P+VVT+S LI+G C+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 416 GQLNQGLKLCDEMKGK--NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL--VPK 471
           G++++  +L  EM  K  ++ PN+ T+   ++ LCK++   +A   ++ L+   L   P 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              ++ +IDG CK G +DEA  +  +M      P+ +T+  L+ G C   +M  A ++  
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            M+  G  PD IT + L+    K    +EA  ++ 
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 275



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 1/207 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +L     T+  ++  LC+ G  ++ + + D M + G  PN       V    ++G+ + A
Sbjct: 321 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 380

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
              L +         +  Y SL+ AL + +  D+A+ +  E       PDT T+NIL+ G
Sbjct: 381 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 440

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G+ ++A     +M   G  PD  T+    SGL R   +A   ELL+ V  K    P
Sbjct: 441 LWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGML-P 499

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNE 357
           D  T +S++   C+ GK+D    +  E
Sbjct: 500 DATTCSSILDWVCRSGKLDDVKAMIKE 526



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 81/173 (46%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL +  +  TYN ++  LC+ G  +      + M S G +P+S      V +  RA + D
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 413

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+S+ +       T  YN L++ L K    ++A+ + +E      QPD++TF    
Sbjct: 414 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 473

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            GL R G +    E    + + G  PD  T ++++  +CR  ++     ++KE
Sbjct: 474 SGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 7/146 (4%)

Query: 437 VYTFTILINALCKENRLNDARRFLK----QLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           V  + I++ +LC   R  D  R L+    ++  + + P    YN +I+G CK+ ++    
Sbjct: 1   VADYNIVLQSLC---RAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGM 57

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  E+ E+   PD VT+  LI   C  G + EA  +   M   GC P+ +T + LI+ L
Sbjct: 58  ELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGL 117

Query: 553 LKGGMPNEAFRIMQRASEDQNLQLPS 578
            K G  +EA  ++Q  +      LP+
Sbjct: 118 CKVGRIDEARELIQEMTRKSCDVLPN 143


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 218/431 (50%), Gaps = 5/431 (1%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S V+  L     TYN V++ LC  G+ D    VF  M   G  P+       +    R G
Sbjct: 155 SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVG 214

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + + A  +  + R   +      ++ L+    ++   D A+   +E       PD   + 
Sbjct: 215 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 274

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ++I G  R G +  A     +M   GC PD+VTYNTL++GLC+   +     LL E++ +
Sbjct: 275 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PD+ T+T++I GYC  GK+DKA  +++ M +  ++P  VT+N LIDG  + G++  
Sbjct: 335 G-VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + + M S    P+ VT+S LID +C  GQ+       DEM  K + PN+ T+  +I 
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 453

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C+   ++  ++FL+++  N + P    YN +I G+ K   + +A  ++  ME+++ +P
Sbjct: 454 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI- 564
           D VT+ +LI G  + G + EA  IF KM   G  PD  T  S+I+  +  G   EAF++ 
Sbjct: 514 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLH 573

Query: 565 ---MQRASEDQ 572
              +QR  E +
Sbjct: 574 DEMLQRGKEKR 584



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 219/433 (50%), Gaps = 13/433 (3%)

Query: 147 RVNLSLNHSFKTY--NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           R+  S N    TY  N+++ + C+    D V  V   M      P+       V +  RA
Sbjct: 84  RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 143

Query: 205 GKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           G  +AA  L+        +PG VT     YNS+L  L +    D+A  +FKE       P
Sbjct: 144 GDAEAAMALVDSMVSKGLKPGIVT-----YNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  +F ILI G  R+GE+++A + + +M   G  PD+V+++ LI    R  ++      L
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E++      PD V YT VI G+C+ G M  A  + +EM  CG  P  VT+N L++G  K
Sbjct: 259 REMRCFG-LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              ++ AE +   M   G  PD+ TF++LI GYC  G+L++ L+L D M  + L P++ T
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  LI+ +C++  L+ A      +   ++ P    Y+ +ID  C+ G V++A   + EM 
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K   P+ +T+  +I G+C  G + +      KM+    +PD IT N+LI   +K    +
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497

Query: 560 EAFRIMQRASEDQ 572
           +AF+++    +++
Sbjct: 498 DAFKLLNMMEKEK 510


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 225/458 (49%), Gaps = 51/458 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN ++ + C+MG  D    +   M S G  PN       ++   R G    A  +L + 
Sbjct: 47  TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 106

Query: 217 ----FRPGEVTMSTFM------------------------------YNSLLNALVKQNNA 242
               F P EVT +T +                              Y +L+N++ K  N 
Sbjct: 107 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 166

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           + A+  F +      +P+  T+  LI G SR G + +A+    +M   G SP +VTYN  
Sbjct: 167 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G C +  +     +++E+  K   +PDVV+Y+++ISG+C+ G++D+A  +  EM   G
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKG-LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 285

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P AVT++ LI G  ++  +  A  + + ML  G  PD  T+++LI+ YC  G LN+ L
Sbjct: 286 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 345

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID-- 480
            L DEM  K   P+  T+++LIN L K+ R  +A+R L +L + + VP    Y+ +I+  
Sbjct: 346 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 405

Query: 481 -------------GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
                        GFC  G + EA+ +   M E+  KP +  + ++I GHC  G + +A 
Sbjct: 406 SNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 465

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +++ +M+  G  P  +TV +LI  L K GM  E   ++
Sbjct: 466 NLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 503



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 215/428 (50%), Gaps = 16/428 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R  C +G        F  M  +G LPN       + +  + G+ D A GLL   
Sbjct: 12  TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN ++N L ++ +  EA  + +E       PD  T+N L+ G  + G  
Sbjct: 72  SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   G SP +VTY  LI+ +C+   + R  E   +++ +    P+  TYT+
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG-LRPNERTYTT 190

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ + G +++A  I NEM   G  PS VT+N  I G   +  M  A  + + M+  G
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV++S++I G+CR G+L++  ++  EM  K +SP+  T++ LI  LC+  RL +A 
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++    L P  F Y  +I+ +C  G++++A  +  EM  K   PD VT+++LI G 
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS-----------CLLKG----GMPNEAF 562
             + R  EA  +  K++     P D+T ++LI             L+KG    G+ +EA 
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430

Query: 563 RIMQRASE 570
           R+ +   E
Sbjct: 431 RVFESMVE 438



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 183/343 (53%), Gaps = 1/343 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V+ + + YN L+          + +  F E  R    P+  T+N LI    ++G + +AF
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                M S G  P++++YN +I+GLCR   +    E+L+E+ +K  F+PD VTY ++++G
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG-FTPDEVTYNTLLNG 124

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YCK G   +A  I+ EM   G+ PS VT+  LI+   K  N+  A    ++M   G  P+
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T+++LIDG+ R G LN+  ++ +EM     SP+V T+   I+  C   R+ +A   ++
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++    L P    Y+ +I GFC+ G +D A  +  EM EK   PD VT++ LI G C   
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           R+ EA  +  +ML +G  PD+ T  +LI+     G  N+A  +
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 347



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 105/278 (37%), Positives = 169/278 (60%), Gaps = 1/278 (0%)

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           SP++ TYN LI G C V E+ +G     E++ ++   P+VVTY ++I  YCK+G++D+A 
Sbjct: 7   SPNVYTYNILIRGFCSVGELQKGLGCFGEME-RNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+   M+S G++P+ +++NV+I+G  + G+M  A  + E M   G+ PD VT+++L++GY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G  +Q L +  EM    +SP+V T+T LIN++CK   LN A  F  Q++   L P  
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             Y  +IDGF + G ++EA  I+ EM E    P  VT+   I GHC+  RM EA+ +  +
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           M+  G APD ++ +++IS   + G  + AF++ Q   E
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 174/381 (45%), Gaps = 21/381 (5%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY  ++ S+C+    +     FD MR  G  PN       +    R G  + A  +L
Sbjct: 149 SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 208

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++      + S   YN+ ++        +EA+ + +E       PD  +++ +I G  R 
Sbjct: 209 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 268

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           GE+ +AF+   +M   G SPD VTY++LI GLC +  +    +L +E+       PD  T
Sbjct: 269 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM-LDMGLPPDEFT 327

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I+ YC  G ++KA  +++EM   G  P AVT++VLI+G  K      A+ +  +++
Sbjct: 328 YTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 387

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
               +P  VT+ +LI+              C  ++ K++         LI   C +  ++
Sbjct: 388 YEESVPSDVTYDTLIEN-------------CSNIEFKSV-------VALIKGFCMKGLMH 427

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A R  + +   +  P   +YN +I G C+ GN+ +A  +  EM      P  VT   LI
Sbjct: 428 EADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 487

Query: 515 IGHCMKGRMVEAISIFNKMLR 535
                +G   E   +    LR
Sbjct: 488 KALFKEGMNEEMSEVIGDTLR 508



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 39/72 (54%)

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M   R  P+  T+ ILI G C  G + + +  F +M R GC P+ +T N+LI    K G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 558 PNEAFRIMQRAS 569
            +EAF +++  S
Sbjct: 61  IDEAFGLLKSMS 72


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 203/400 (50%), Gaps = 5/400 (1%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             T+N+ +  LC        Q VFD MR  G  PN       +S     G+   A+ L  
Sbjct: 50  ISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYE 109

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +      +     YN+LL+   K    DEA+ +F    +    PD  T+N LI G  +  
Sbjct: 110 RMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKAD 169

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++ +A      M S    PD+VTYN+L++GLC+   V     L+ +      FSP+V+TY
Sbjct: 170 KLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD----KGFSPNVITY 225

Query: 336 TSVISGYCK-LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +++ISG C+ L +++ A  +  +M   G KP  V++N LI G  +   +  A  +   +L
Sbjct: 226 STLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             GY P+V T++ LIDG  +  ++N+  +L   +    L P+  T+T+ I+ LCK  R+ 
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 345

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA   LK +     VP    +N VI+G CK   VDEA V+++ ME K C P+ ++F  LI
Sbjct: 346 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 405

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            G C  G+  +A++ F +ML+ G  P  +T N L+  L K
Sbjct: 406 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK 445



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 216/445 (48%), Gaps = 37/445 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN ++   C+    D  Q +   M S+  +P+       V+   + G+ D A+ L+   
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK 216

Query: 217 -FRPGEVTMSTFM-------------------------------YNSLLNALVKQNNADE 244
            F P  +T ST +                               YN+L++ L ++    E
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSE 276

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A+ +F    R   +P+  T+NILI GL +   V +AFE F  +   G  PD +TY   I 
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 336

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+   V     +LK++  K    PDVV++ +VI+G CK  ++D+A  + + M + G  
Sbjct: 337 GLCKAGRVEDALLMLKDMDEKG-CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR---NGQLNQG 421
           P+A++FN LI G  + G    A    + ML  G  P VVT++ L+DG C+    G++ + 
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           + L D M  K   P+V T++ LI+ L K  +L+DARR L  ++    +P  + YN +I G
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C    VDEA  +   M EK C PD +T+  +I   C +  + +A+++F+  L  G  P 
Sbjct: 516 LCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPT 575

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQ 566
                SLI  L      +EA +++Q
Sbjct: 576 SGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 212/449 (47%), Gaps = 37/449 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C++G  D    +FD     G +P+       ++   +A K D A+ +L + 
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMF--------------------KEYFRLYS 257
               +      YNSL+N L K    DEA  +                     +E  RL S
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLES 241

Query: 258 -------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
                        +PD  ++N LI GL+R   V +A + F  +   G  P++ TYN LI 
Sbjct: 242 ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GL + + V    EL   +  K    PD +TYT  I G CK G+++ A  +  +M+  G  
Sbjct: 302 GLLKEDRVNEAFELFSGL-VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 360

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  V+ N +I+G  K   +  AE +   M + G  P+ ++F++LI G CR G+  + +  
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420

Query: 425 CDEMKGKNLSPNVYTFTILINALCK---ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             EM  + + P V T+ IL++ LCK   E R+ +A      +     VP    Y+ +IDG
Sbjct: 421 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 480

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
             KAG +D+A  ++  ME K C P+  T+  LI G C   ++ EA+ +F  M+  GC PD
Sbjct: 481 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPD 540

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
            IT  ++IS L K  M ++A  +   + E
Sbjct: 541 TITYGTIISALCKQEMVDKALALFDGSLE 569



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 214/406 (52%), Gaps = 6/406 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T  +++RSL + G  +      + +   G L +      ++S   RA +   A+ +    
Sbjct: 18  TVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTVFDGM 76

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R      +   YN+LL+ L       +A  +++   +    PD  T+N L+ G  ++G++
Sbjct: 77  RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKL 136

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F      G  PD+VTYN LI+G C+ +++     +L+ +  +S   PDVVTY S
Sbjct: 137 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES-LVPDVVTYNS 195

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK-VGNMVSAEYMRERMLSF 396
           +++G CK G++D+A  +  +    G  P+ +T++ LI G  + +  + SA  + E+M+  
Sbjct: 196 LVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD+V++++LI G  R   +++ LKL   +  +   P V T+ ILI+ L KE+R+N+A
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                 L  + L P    Y   IDG CKAG V++A +++ +M+EK C PD V+   +I G
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            C + R+ EA  + + M   GC+P+ I+ N+LI    + G   +A 
Sbjct: 373 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 170/318 (53%), Gaps = 42/318 (13%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           ++ +  R+YS PD +T  IL++ L + G+++KA  F   +              L+ GLC
Sbjct: 4   VYDKLVRIYS-PDAYTVGILLRSLLKSGKIEKAHRFVEQL--------------LVKGLC 48

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
                                  D+ T+   ISG C+  ++  A  +++ M   G  P+ 
Sbjct: 49  -----------------------DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNR 85

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           +T+N L+ G    G M  A+ + ERM+  GY PDVVT+++L+ G+C+ G+L++ LK+ D 
Sbjct: 86  ITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDG 145

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
              +   P+V T+  LIN  CK ++L++A+R L+++    LVP    YN +++G CK G 
Sbjct: 146 AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGR 205

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE-AISIFNKMLRIGCAPDDITVN 546
           VDEA +++    +K   P+ +T++ LI G C + R +E A  +  KM+  GC PD ++ N
Sbjct: 206 VDEARMLIV---DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYN 262

Query: 547 SLISCLLKGGMPNEAFRI 564
           +LI  L +    +EA ++
Sbjct: 263 ALIHGLAREQGVSEALKL 280



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 1/170 (0%)

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y PD  T   L+    ++G++ +  +  +++  K L  ++ TF I I+ LC+ +R+ DA+
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQ 70

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                ++ +   P    YN ++ G C  G + +A  +   M +    PD VT+  L+ G 
Sbjct: 71  TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C  G++ EA+ IF+  ++ G  PD +T N+LI+   K    +EA RI+QR
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 1/135 (0%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           SP+ YT  IL+ +L K  ++  A RF++QL    L      +N  I G C+A  + +A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIS-TFNIYISGLCRASRIGDAQT 71

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +   M +    P+++T+  L+ G C  GRM +A +++ +M++ G +PD +T N+L+    
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 554 KGGMPNEAFRIMQRA 568
           K G  +EA +I   A
Sbjct: 132 KVGKLDEALKIFDGA 146


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 218/425 (51%), Gaps = 3/425 (0%)

Query: 142  FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            F EF  V +  N +  +YN+V+  +C++G       +   M   G+ P+       V+  
Sbjct: 677  FREFPEVGVCWNVA--SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 734

Query: 202  IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
             R G+ D    L+   +   +  ++++Y S++  L +     EA   F E  R    PDT
Sbjct: 735  CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794

Query: 262  WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
              +  LI G  + G+++ A +FFY+M S   +PD++TY  +ISG C++ ++    +L  E
Sbjct: 795  VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854

Query: 322  VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
            + F     PD VT+T +I+GYCK G M  A  ++N M   G  P+ VT+  LIDG  K G
Sbjct: 855  M-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913

Query: 382  NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            ++ SA  +   M   G  P++ T++S+++G C++G + + +KL  E +   L+ +  T+T
Sbjct: 914  DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973

Query: 442  ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
             L++A CK   ++ A+  LK++    L P    +N +++GFC  G +++   ++  M  K
Sbjct: 974  TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1033

Query: 502  RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               P+  TF  L+  +C++  +  A +I+  M   G  PD  T  +L+    K     EA
Sbjct: 1034 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093

Query: 562  FRIMQ 566
            + + Q
Sbjct: 1094 WFLFQ 1098



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 197/401 (49%), Gaps = 1/401 (0%)

Query: 159  YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            Y  ++  LC +      +  F  M   G LP++ +    +    + G   AA     +  
Sbjct: 762  YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821

Query: 219  PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++T     Y ++++   +  +  EA  +F E F    +PD+ TF  LI G  + G +K
Sbjct: 822  SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881

Query: 279  KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
             AF     M   GCSP++VTY TLI GLC+  ++   +ELL E+ +K    P++ TY S+
Sbjct: 882  DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSI 940

Query: 339  ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
            ++G CK G +++A  +  E  + G+    VT+  L+D + K G M  A+ + + ML  G 
Sbjct: 941  VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 1000

Query: 399  LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             P +VTF+ L++G+C +G L  G KL + M  K ++PN  TF  L+   C  N L  A  
Sbjct: 1001 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 1060

Query: 459  FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              K +    + P    Y  ++ G CKA N+ EA  +  EM+ K       T+++LI G  
Sbjct: 1061 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 1120

Query: 519  MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
             + + +EA  +F++M R G A D    +       KG  P+
Sbjct: 1121 KRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 1161



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 206/410 (50%), Gaps = 2/410 (0%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR-AGKCDAAKGLLS 215
            + +++  + L + GL    + VF+ M + G + +      +++   +   K   A  +  
Sbjct: 619  RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 678

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            +F    V  +   YN +++ + +     EA ++          PD  +++ ++ G  R G
Sbjct: 679  EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            E+ K ++    M   G  P+   Y ++I  LCR+ ++A   E   E+  +    PD V Y
Sbjct: 739  ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVY 797

Query: 336  TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            T++I G+CK G +  A+  + EM+S  I P  +T+  +I GF ++G+MV A  +   M  
Sbjct: 798  TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 857

Query: 396  FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
             G  PD VTF+ LI+GYC+ G +    ++ + M     SPNV T+T LI+ LCKE  L+ 
Sbjct: 858  KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917

Query: 456  ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
            A   L ++    L P  F YN +++G CK+GN++EA  +V E E      D VT+T L+ 
Sbjct: 918  ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977

Query: 516  GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +C  G M +A  I  +ML  G  P  +T N L++     GM  +  +++
Sbjct: 978  AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 72/172 (41%)

Query: 152  LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
            LN    TY  +M + C+ G  D  Q +   M   G  P        ++     G  +  +
Sbjct: 965  LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1024

Query: 212  GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             LL+      +  +   +NSL+     +NN   A  ++K+       PD  T+  L++G 
Sbjct: 1025 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 1084

Query: 272  SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
             +   +K+A+  F +M   G S  + TY+ LI G  +  +     E+  +++
Sbjct: 1085 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 215/409 (52%), Gaps = 3/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    D  Q +F++M+S    P+       +    R GK + A  L  + 
Sbjct: 12  TYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +     +N L+  L +    + A+  F++     S P+  T+++LI GL +   V
Sbjct: 72  LDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVLIDGLCKANRV 129

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E    M + GCSPD++TY  L+ GLC+ ++VA   E+L+E+   +   P++VTY S
Sbjct: 130 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM-LDAGCVPNLVTYNS 188

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C+  ++  A  +  +M   G  P+ VT+  LIDG  KVG +  A  M   M+  G
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 248

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++ ++ LI+G C+  Q+++ + L        + P+V T++ +I  LC+ NRL++A 
Sbjct: 249 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 308

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L  +K     P   +Y+ +IDG CKAG VDEA  +   M    C  D VT++ LI G 
Sbjct: 309 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGL 368

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C  GR+ EA  +  +M+R+G  P  +T NSLI  L      +EA  +++
Sbjct: 369 CKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVE 417



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 208/386 (53%), Gaps = 3/386 (0%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           MR  G  PN       +    +  + D A+ L    +  E + S   YN+LL+ L +   
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            + A+ +F+E     S  D  +FNIL+ GL R G+++ A EFF  M    CSP+++TY+ 
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI GLC+ N V++  ELL+ +K +   SPDV+TYT ++ G CK  K+  A  +  EM   
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARG-CSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G  P+ VT+N L+ G  +   +  A  +   M   G  P+VVT+ +LIDG C+ G++   
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             +  +M  K  +P++  + +LIN LCK ++++++   L++     + P    Y+ VI G
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C++  +DEA  ++  ++ + C PD + ++ LI G C  G++ EA  ++  M   GC  D
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQR 567
            +T ++LI  L K G  +EA  ++ R
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLAR 383



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 209/427 (48%), Gaps = 11/427 (2%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR--SDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +H   ++N+++  LC  G    ++   ++ R   D   PN       +    +A +   A
Sbjct: 76  SHDVISFNILVTGLCRAG---KIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQA 132

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             LL   +    +     Y  L++ L K++    A  + +E       P+  T+N L+ G
Sbjct: 133 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 192

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L R   V  A     DM   GC+P++VTY TLI GLC+V  V     +L ++  K   +P
Sbjct: 193 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG-TP 251

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D++ Y  +I+G CK  ++D++  +     S GIKP  VT++ +I G  +   +  A  + 
Sbjct: 252 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 311

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             + S G  PDV+ +S+LIDG C+ G++++   L + M G     +V T++ LI+ LCK 
Sbjct: 312 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKA 371

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R+++A   L ++      P    YN +I G C   ++DEA  +V EME   C P  VT+
Sbjct: 372 GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 431

Query: 511 TILIIGHCMKGRM-VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            ILI G C   R+   A+  F +M+  G  PD IT     S LL+G   ++    ++   
Sbjct: 432 NILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITY----SILLEGLKKSKDLHELRHLV 487

Query: 570 EDQNLQL 576
            DQ +QL
Sbjct: 488 LDQMVQL 494



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 187/344 (54%), Gaps = 5/344 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YNSL++ L K N  D A  +F+    +   P   T+N L+ GL R G++++A   F +M 
Sbjct: 13  YNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML 72

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
               S D++++N L++GLCR  ++    E  +  K     SP+V+TY+ +I G CK  ++
Sbjct: 73  DRR-SHDVISFNILVTGLCRAGKIETALEFFR--KMDDRCSPNVITYSVLIDGLCKANRV 129

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSS 407
            +A  +   M + G  P  +T+ +L+DG  K   + +A E +RE ML  G +P++VT++S
Sbjct: 130 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE-MLDAGCVPNLVTYNS 188

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+ G CR  +++  L L  +M  +  +PNV T+  LI+ LCK  R+ DA   L  +    
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 248

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P   +YN +I+G CKA  VDE+  ++        KPD VT++ +I G C   R+ EA 
Sbjct: 249 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 308

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +   +   GC PD I  ++LI  L K G  +EAF + +  + D
Sbjct: 309 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGD 352


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 217/430 (50%), Gaps = 6/430 (1%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S V+  L     TYN V++ LC  G+ D    VF  M   G  P+       +    R G
Sbjct: 216 SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVG 275

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + + A  +  + R   +      ++ L+    ++   D A+   +E       PD   + 
Sbjct: 276 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 335

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ++I G  R G +  A     +M   GC PD+VTYNTL++GLC+   +     LL E++ +
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PD+ T+T++I GYC  GK+DKA  +++ M +  ++P  VT+N LIDG  + G++  
Sbjct: 396 G-VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + + M S    P+ VT+S LID +C  GQ+       DEM  K + PN+ T+  +I 
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 514

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C+   ++  ++FL+++  N + P    YN +I G+ K   + +A  ++  ME+++ +P
Sbjct: 515 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 574

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D VT+ +LI G  + G + EA  IF KM   G  PD  T  S+I+  +  G   EAF++ 
Sbjct: 575 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL- 633

Query: 566 QRASEDQNLQ 575
                D+ LQ
Sbjct: 634 ----HDEMLQ 639



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 219/433 (50%), Gaps = 13/433 (3%)

Query: 147 RVNLSLNHSFKTY--NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           R+  S N    TY  N+++ + C+    D V  V   M      P+       V +  RA
Sbjct: 145 RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 204

Query: 205 GKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           G  +AA  L+        +PG VT     YNS+L  L +    D+A  +FKE       P
Sbjct: 205 GDAEAAMALVDSMVSKGLKPGIVT-----YNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  +F ILI G  R+GE+++A + + +M   G  PD+V+++ LI    R  ++      L
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E++      PD V YT VI G+C+ G M  A  + +EM  CG  P  VT+N L++G  K
Sbjct: 320 REMRCFG-LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              ++ AE +   M   G  PD+ TF++LI GYC  G+L++ L+L D M  + L P++ T
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  LI+ +C++  L+ A      +   ++ P    Y+ +ID  C+ G V++A   + EM 
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K   P+ +T+  +I G+C  G + +      KM+    +PD IT N+LI   +K    +
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558

Query: 560 EAFRIMQRASEDQ 572
           +AF+++    +++
Sbjct: 559 DAFKLLNMMEKEK 571



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 36/184 (19%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +N  +  +  TYN +++  C                                   R+G  
Sbjct: 498 INKGILPNIMTYNSIIKGYC-----------------------------------RSGNV 522

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
              +  L +    +V+     YN+L++  +K++   +A  +     +   QPD  T+N+L
Sbjct: 523 SKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 582

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G S  G V++A   F  M + G  PD  TY ++I+G           +L  E+  +  
Sbjct: 583 INGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM-LQRG 641

Query: 328 FSPD 331
           F+PD
Sbjct: 642 FAPD 645


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 218/425 (51%), Gaps = 3/425 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F EF  V +  N +  +YN+V+  +C++G       +   M   G+ P+       V+  
Sbjct: 234 FREFPEVGVCWNVA--SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            R G+ D    L+   +   +  ++++Y S++  L +     EA   F E  R    PDT
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             +  LI G  + G+++ A +FFY+M S   +PD++TY  +ISG C++ ++    +L  E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F     PD VT+T +I+GYCK G M  A  ++N M   G  P+ VT+  LIDG  K G
Sbjct: 412 M-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           ++ SA  +   M   G  P++ T++S+++G C++G + + +KL  E +   L+ +  T+T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L++A CK   ++ A+  LK++    L P    +N +++GFC  G +++   ++  M  K
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              P+  TF  L+  +C++  +  A +I+  M   G  PD  T  +L+    K     EA
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650

Query: 562 FRIMQ 566
           + + Q
Sbjct: 651 WFLFQ 655



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 197/401 (49%), Gaps = 1/401 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LC +      +  F  M   G LP++ +    +    + G   AA     +  
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++T     Y ++++   +  +  EA  +F E F    +PD+ TF  LI G  + G +K
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            AF     M   GCSP++VTY TLI GLC+  ++   +ELL E+ +K    P++ TY S+
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSI 497

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ++G CK G +++A  +  E  + G+    VT+  L+D + K G M  A+ + + ML  G 
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P +VTF+ L++G+C +G L  G KL + M  K ++PN  TF  L+   C  N L  A  
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K +    + P    Y  ++ G CKA N+ EA  +  EM+ K       T+++LI G  
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            + + +EA  +F++M R G A D    +       KG  P+
Sbjct: 678 KRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 206/410 (50%), Gaps = 2/410 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR-AGKCDAAKGLLS 215
           + +++  + L + GL    + VF+ M + G + +      +++   +   K   A  +  
Sbjct: 176 RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +F    V  +   YN +++ + +     EA ++          PD  +++ ++ G  R G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E+ K ++    M   G  P+   Y ++I  LCR+ ++A   E   E+  +    PD V Y
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVY 354

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+CK G +  A+  + EM+S  I P  +T+  +I GF ++G+MV A  +   M  
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD VTF+ LI+GYC+ G +    ++ + M     SPNV T+T LI+ LCKE  L+ 
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L ++    L P  F YN +++G CK+GN++EA  +V E E      D VT+T L+ 
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +C  G M +A  I  +ML  G  P  +T N L++     GM  +  +++
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 72/172 (41%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           LN    TY  +M + C+ G  D  Q +   M   G  P        ++     G  +  +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            LL+      +  +   +NSL+     +NN   A  ++K+       PD  T+  L++G 
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            +   +K+A+  F +M   G S  + TY+ LI G  +  +     E+  +++
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 218/414 (52%), Gaps = 7/414 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ SLC+ G  +  + +   M S G +PN       ++   + G+ D A+ L+ + 
Sbjct: 118 TYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 177

Query: 218 --RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY--FRLYSQPDTWTFNILIQGLSR 273
             +  +V  +   YNS L+ L KQ+   EA  + +      L   PDT TF+ LI GL +
Sbjct: 178 TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 237

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G+  +A     DM + G  P++VTYN L++GLC+ +++ R H +++ +  K   +PDV+
Sbjct: 238 CGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKG-VTPDVI 294

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+ ++  +CK  ++D+A  + + M S G  P+ VTFN +IDG  K      A  +  ++
Sbjct: 295 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQV 354

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            +   +PD VTF+ LI G C+ G   Q   L +EM  KN+ P+V TF  LI+ LCK  ++
Sbjct: 355 YNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQV 414

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             AR  L  +    + P    YN ++ G CK+G ++E    + EM    C P+ +T+  L
Sbjct: 415 EAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSL 474

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   C   R  +A+ + +K+   G  PD +T N L+  L K G   +A  +++ 
Sbjct: 475 VYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 528



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 225/432 (52%), Gaps = 10/432 (2%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           LKF  F R   S + S   YN+V++SLC  G    ++++    M  DG  P        +
Sbjct: 33  LKFF-FVR---SSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII 88

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           +   ++ +  A   L  +            YN+L+++L K  + +EA  +          
Sbjct: 89  NGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCV 148

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS--PDIVTYNTLISGLCRVNEVARGH 316
           P+  T+++LI GL ++G + +A E   +M    C   P+I+TYN+ + GLC+ +  A   
Sbjct: 149 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEAC 208

Query: 317 ELLKEVKFKS-EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           EL++ ++  S   SPD VT++++I G CK G+ D+A    ++M + G  P+ VT+N L++
Sbjct: 209 ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVN 266

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  K   M  A  M E M+  G  PDV+T+S L+D +C+  ++++ L+L   M  +  +P
Sbjct: 267 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 326

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV TF  +I+ LCK +R  +A +   Q+    LVP    +N +I G CKAGN ++A+ + 
Sbjct: 327 NVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALF 386

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            EM  K  +PD +TF  LI G C  G++  A  I + M  +G  P+ +T N L+  L K 
Sbjct: 387 EEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKS 446

Query: 556 GMPNEAFRIMQR 567
           G   E    ++ 
Sbjct: 447 GRIEEPCEFLEE 458



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 233/508 (45%), Gaps = 28/508 (5%)

Query: 68  HFHGLANGGSRPFDEKEVNYR----CSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSP 123
           H H  A     P     +N +    C  +F+FV+       RS    +   + LC     
Sbjct: 6   HHHTAAANLLVPITTATINTQRVNLCPLKFFFVRSSS----RSVADYNIVLQSLCRAGET 61

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
             +LE+ +            E +R  ++   +  TYN ++  LC+     +   +F+ + 
Sbjct: 62  ARALEIFRG-----------EMARDGVA--PTIVTYNTIINGLCKSNELGAGMELFEELV 108

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
             GH P+       + S  +AG  + A+ L           +   Y+ L+N L K    D
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168

Query: 244 EAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIGEVKKAFEFFYDM--GSFGCSPDIVTY 299
           EA  + +E  R      P+  T+N  + GL +     +A E    +  GS   SPD VT+
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 228

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           +TLI GLC+  +     E   +      + P+VVTY ++++G CK  KM++A  +   M 
Sbjct: 229 STLIDGLCKCGQT---DEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G+ P  +T++VL+D F K   +  A  +   M S G  P+VVTF+S+IDG C++ +  
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +  ++  ++  + L P+  TF ILI   CK      A    +++   ++ P    +  +I
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG CKAG V+ A  I+  M      P+ VT+ +L+ G C  GR+ E      +M+  GC 
Sbjct: 406 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV 465

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQR 567
           P+ +T  SL+  L +    ++A +++ +
Sbjct: 466 PESMTYGSLVYALCRASRTDDALQLVSK 493



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 215/432 (49%), Gaps = 15/432 (3%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +N L  + R+D  +  ++  E +R +  +  +  TYN  +  LC+  +      +   +R
Sbjct: 158 INGLCKVGRIDEARELIQ--EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 215

Query: 184 SDGHL---PNSPMIEFFVSSCIRAGKCDAA---KGLLSQFRPGEVTMSTFMYNSLLNALV 237
            DG L   P++      +    + G+ D A     +   + P  VT     YN+L+N L 
Sbjct: 216 -DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVT-----YNALVNGLC 269

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K +  + A  M +        PD  T+++L+    +   V +A E  + M S GC+P++V
Sbjct: 270 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV 329

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+N++I GLC+ +      ++  +V +     PD VT+  +I+G CK G  ++A+ ++ E
Sbjct: 330 TFNSIIDGLCKSDRSGEAFQIALQV-YNRMLVPDKVTFNILIAGACKAGNFEQASALFEE 388

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M +  ++P  +TF  LIDG  K G + +A  + + M + G  P+VVT++ L+ G C++G+
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  +  +EM      P   T+  L+ ALC+ +R +DA + + +LK     P    YN 
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG  K+G  ++A  ++ EM  K  +PD  TF     G    G +   + +   +L  G
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKG 568

Query: 538 CAPDDITVNSLI 549
             PD  T +S++
Sbjct: 569 MLPDATTCSSIL 580



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 154/323 (47%), Gaps = 1/323 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    +    + + M   G  P+       V +  +A + D A  LL   
Sbjct: 260 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 319

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   +NS+++ L K + + EA  +  + +     PD  TFNILI G  + G  
Sbjct: 320 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNF 379

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F +M +    PD++T+  LI GLC+  +V    ++L ++       P+VVTY  
Sbjct: 380 EQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL-DLMGNLGVPPNVVTYNV 438

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK G++++      EM S G  P ++T+  L+    +      A  +  ++ SFG
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + PD VT++ L+DG  ++G+  Q + + +EM GK   P+ +TF      L +   L    
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTM 558

Query: 458 RFLKQLKWNDLVPKPFMYNPVID 480
             L+ +    ++P     + ++D
Sbjct: 559 ELLRVVLAKGMLPDATTCSSILD 581



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 1/149 (0%)

Query: 431 KNLSPNVYTFTILINALCKENRLNDARR-FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
           ++ S +V  + I++ +LC+      A   F  ++  + + P    YN +I+G CK+  + 
Sbjct: 39  RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 98

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
               +  E+ ++   PD VT+  LI   C  G + EA  +   M   GC P+ +T + LI
Sbjct: 99  AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
           + L K G  +EA  ++Q  +      LP+
Sbjct: 159 NGLCKVGRIDEARELIQEMTRKSCDVLPN 187


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/424 (31%), Positives = 215/424 (50%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R+LC  G       +   MR  G  PN       V++  RAG+ D A+ L+   
Sbjct: 152 TYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 211

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G +  +   +NS++N + K    ++A  +F E  R    PD  ++N L+ G  + G  
Sbjct: 212 LDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCS 271

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M   G  PD+VT+ +LI  +C+   +     L+++++ +     + VT+T+
Sbjct: 272 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERG-LQMNEVTFTA 330

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK G +D A      M  C IKPS V +N LI+G+  VG M  A  +   M + G
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+S++I  YC+N   +   +L  +M  K + P+  T++ LI  LC+E RL+DA 
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +    L P  F Y  +IDG CK GNV+ A  +  +M +    PD VT+++LI G 
Sbjct: 451 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC-----------LLKG----GMPNEAF 562
               R +EA  +  K+      P +   ++L+ C           LLKG    G+ NEA 
Sbjct: 511 SKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 570

Query: 563 RIMQ 566
           ++ Q
Sbjct: 571 KVYQ 574



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 175/328 (53%), Gaps = 2/328 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   YN++L AL    +   A   F         P+ +T+NILI+ L   G  K+A    
Sbjct: 115 SVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSIL 173

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            DM   GC P++VTYNTL++   R  EV  G E L  +       P++VT+ S+++G CK
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEV-DGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GKM+ A  +++EM   G+ P  V++N L+ G+ K G    A  +   M   G +PDVVT
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F+SLI   C+ G L   + L  +M+ + L  N  TFT LI+  CK+  L+DA   ++ ++
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    YN +I+G+C  G +DEA  ++ EME K  KPD VT++ +I  +C      
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCL 552
            A  +  +ML  G  PD IT +SLI  L
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVL 440



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 209/411 (50%), Gaps = 2/411 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   YN V+ +L +  L  S +  FD M SDG  PN       + +    G    A  +L
Sbjct: 115 SVLAYNAVLLALSDASL-TSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSIL 173

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              R      +   YN+L+ A  +    D A  +         +P+  TFN ++ G+ + 
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+++ A + F +M   G +PD V+YNTL+ G C+         +  E+  K    PDVVT
Sbjct: 234 GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG-IMPDVVT 292

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +TS+I   CK G ++ A  +  +M   G++ + VTF  LIDGF K G +  A      M 
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                P VV +++LI+GYC  G++++  +L  EM+ K L P+V T++ +I+A CK    +
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    +Q+    ++P    Y+ +I   C+   + +A+V+   M +   +PD+ T+T LI
Sbjct: 413 SAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            GHC +G +  A+S+ +KM++ G  PD +T + LI+ L K     EA +++
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 212/431 (49%), Gaps = 16/431 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  +  T+N ++  +C+ G  +  + VFD M  +G  P+       V    +AG    A 
Sbjct: 216 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEAL 275

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + ++     +      + SL++ + K  N + AV + ++      Q +  TF  LI G 
Sbjct: 276 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGF 335

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G +  A      M      P +V YN LI+G C V  +    ELL E++ K    PD
Sbjct: 336 CKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG-LKPD 394

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTY+++IS YCK      A  +  +M   G+ P A+T++ LI    +   +  A  + +
Sbjct: 395 VVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFK 454

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G  PD  T++SLIDG+C+ G + + L L D+M    + P+V T+++LIN L K  
Sbjct: 455 NMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 514

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYN---------------PVIDGFCKAGNVDEANVIVA 496
           R  +A++ L +L   + +P    Y+                ++ GFC  G ++EA+ +  
Sbjct: 515 RAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQ 574

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M ++    D   +++LI GHC  G +++A+S   +ML+ G AP+  +  SLI  L + G
Sbjct: 575 SMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENG 634

Query: 557 MPNEAFRIMQR 567
           M  EA +++Q+
Sbjct: 635 MVVEADQVIQQ 645



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 170/312 (54%), Gaps = 2/312 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P    +N ++  LS    +  A  FF  M S G +P++ TYN LI  LC          +
Sbjct: 114 PSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L++++  +   P+VVTY ++++ + + G++D A  +   M   G+KP+ VTFN +++G  
Sbjct: 173 LRDMR-GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G M  A  + + M+  G  PD V++++L+ GYC+ G  ++ L +  EM  K + P+V 
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TFT LI+ +CK   L  A   ++Q++   L      +  +IDGFCK G +D+A + V  M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            + R KP  V +  LI G+CM GRM EA  + ++M   G  PD +T +++IS   K    
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 559 NEAFRIMQRASE 570
           + AF + Q+  E
Sbjct: 412 HSAFELNQQMLE 423



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 184/433 (42%), Gaps = 51/433 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++   C+ G       VF  M   G +P+       +    +AG  + A  L+ Q 
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM 316

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   + M+   + +L++   K+   D+A+   +   +   +P    +N LI G   +G +
Sbjct: 317 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRM 376

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E  ++M + G  PD+VTY+T+IS  C+  +     EL +++  K    PD +TY+S
Sbjct: 377 DEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL-PDAITYSS 435

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C+  ++  A  ++  M   G++P   T+  LIDG  K GN+  A  + ++M+  G
Sbjct: 436 LIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAG 495

Query: 398 YLPDVVTFSSLIDG---------------------------------------------- 411
            LPDVVT+S LI+G                                              
Sbjct: 496 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLA 555

Query: 412 ----YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
               +C  G +N+  K+   M  +N + +   +++LI+  C+   +  A  F KQ+    
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P       +I G  + G V EA+ ++ ++       D      LI  +  +G +   +
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVL 675

Query: 528 SIFNKMLRIGCAP 540
            + + M + G  P
Sbjct: 676 DVLHGMAKDGLLP 688



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 30/267 (11%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R LCE+          KRL +  +  K    + + L L     TY  ++   C+ G  + 
Sbjct: 438 RVLCEE----------KRLSDAHVLFK----NMIKLGLQPDEFTYTSLIDGHCKEGNVER 483

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
              + D M   G LP+       ++   ++ +   A+ LL +    E   +   Y++L++
Sbjct: 484 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMH 543

Query: 235 -----------ALVK----QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
                      AL+K    +   +EA  +++         D   +++LI G  R G V K
Sbjct: 544 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 603

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A  F   M   G +P+  +  +LI GL     V    ++++++      + D     ++I
Sbjct: 604 ALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLA-DAEASKALI 662

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPS 366
                 G +D    + + M   G+ PS
Sbjct: 663 DLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 215/413 (52%), Gaps = 4/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ +       +    + + MR  G  PN       V +  +     AA+ ++ + 
Sbjct: 59  TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G    +   +NSL++   K+ N D+A  +         +P+  T++ LI GL +  + 
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E   +M + G +PD  TY+ LI GLC+ +++    ++L+ +   S  +PDVV Y+S
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA-GSGCTPDVVVYSS 237

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK GK+ +A     EM      P  VT+N +IDG  K+G +  A+ + ++M   G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 398 -YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             LPDVVT+S++I+G C++  L +  KL D M     +P+V T+T +I+ LCK  RL +A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L+ +K     P    Y  +I G CKA  VDEA  ++ EM    C P+ VT+  ++ G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 517 HCMKGRMVEAISIFNKML--RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C+ GR+ EA  +  +M   R  C+PD  T  ++++ L+   +  EA +++++
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 470



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 215/403 (53%), Gaps = 7/403 (1%)

Query: 167 CEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS 225
           C  G LH ++++  + M+S G  P++      +++   AG  D   G +   R      +
Sbjct: 1   CNAGDLHAALEL-LEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPN 56

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
              Y +L+ A  +    +EA+ + +E       P+  T+N+L+  L ++  V  A +   
Sbjct: 57  VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M   G +P+++T+N+L+ G C+   V    +LL  +       P+VVTY+++I G CK 
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG-IMVAKGMRPNVVTYSALIDGLCKS 175

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            K  +A  +  EM + G+ P A T++ LI G  K   +  AE M  RM   G  PDVV +
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           SS+I  +C++G+L +  K   EM+ +  SP+V T+  +I+ LCK  ++ +A+  L Q++ 
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295

Query: 466 N-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
           + D++P    Y+ VI+G CK+  + EA  ++  M +  C PD VT+T +I G C  GR+ 
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 355

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           EA  +   M R GCAP+ +T  +LIS L K    +EA R+M+ 
Sbjct: 356 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 398



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 208/390 (53%), Gaps = 2/390 (0%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
            D++RS G  PN       +++  RA K + A  LL + R      +   YN L++AL K
Sbjct: 45  MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
            +    A  + K+       P+  TFN L+ G  + G V  A +    M + G  P++VT
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y+ LI GLC+  +     E+L+E+K  S  +PD  TY+++I G CK  K+++A  +   M
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMK-ASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G  P  V ++ +I  F K G ++ A+   + M      PDVVT++++IDG C+ G++
Sbjct: 224 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 283

Query: 419 NQGLKLCDEMK-GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   + D+M+   ++ P+V T++ +IN LCK + L +A++ L ++      P    Y  
Sbjct: 284 AEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 343

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +IDG CK G ++EA  ++  M+   C P+ VT+T LI G C   ++ EA  +  +M   G
Sbjct: 344 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 403

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C P+ +T N++++ L   G   EA +++QR
Sbjct: 404 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQR 433



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 180/343 (52%), Gaps = 2/343 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C+ G  D  + +   M + G  PN       +    ++ K   AK +L + 
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 188

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   VT   F Y++L++ L K +  +EA  M +        PD   ++ +I    + G++
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M     SPD+VTYNT+I GLC++ ++A    +L +++   +  PDVVTY++
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYST 308

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G CK   + +A  + + M   G  P  VT+  +IDG  K G +  AEY+ + M   G
Sbjct: 309 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 368

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT+++LI G C+  ++++  ++ +EM+     PN+ T+  ++N LC   R+ +A+
Sbjct: 369 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 428

Query: 458 RFLKQLK--WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           + ++++K    +  P    Y  +++    +  V EA  ++ +M
Sbjct: 429 QLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 172/303 (56%), Gaps = 5/303 (1%)

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++  A E   +M S G +PD  T+  +I+ +    ++    + L+ +       P+VVT
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC----DPNVVT 59

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I+ + +  K+++A  +  EM   G  P+ VT+NVL+D   K+  + +A+ + ++M+
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G+ P+V+TF+SL+DG+C+ G ++   KL   M  K + PNV T++ LI+ LCK  +  
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A+  L+++K + + P  F Y+ +I G CKA  ++EA  ++  M    C PD V ++ +I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
              C  G+++EA     +M +   +PD +T N++I  L K G   EA  I+ +  E  ++
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 575 QLP 577
            LP
Sbjct: 300 -LP 301



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 33/170 (19%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N    TY  ++  LC+ G  +  + +   M+  G  PN       +S   +A K D A+ 
Sbjct: 335 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAER 394

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           ++ + R      +   YN+++N L                               + G  
Sbjct: 395 VMEEMRNAGCPPNLVTYNTMVNGLC------------------------------VSG-- 422

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           RI E ++  +   D G   CSPD  TY T+++ L   + V    +LL+++
Sbjct: 423 RIKEAQQLVQRMKD-GRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 234/440 (53%), Gaps = 10/440 (2%)

Query: 139 GLKFLEFSRV--NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
            ++ LEF R     S+      +N+++  L + G  D    +F+ M S    P       
Sbjct: 78  AMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNT 137

Query: 197 FVSSCIRAGKCDAAKGLLSQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
            +S   ++G  + A+ LL +   + G+       YN+L+NA  + +   EA   F+E  +
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC-AFREKMK 196

Query: 255 LYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
                PD  T NIL+ G+ + G+V++A E    M   G  PD++TYN++I  LC   +V 
Sbjct: 197 AAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVV 256

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              E+LK +      SPD+VT+ +++ G+CK G + +A  +  EM    I P  +T+ +L
Sbjct: 257 EAAEILKTMSC----SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           ++G  +VG +  A Y+ E ++  GY+PDV+ ++SL+DG C++G++ +  KL  EM  +  
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGC 372

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
              V  ++ L++  C+   ++ AR  L ++   ++VP  F YN V+ G  K G++ +A  
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 432

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +++++  +   PD VT+  LI G C   R+ EA  + ++M   GC P+D+T+ S++  L 
Sbjct: 433 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLC 492

Query: 554 KGGMPNEAFRIMQRASEDQN 573
           + G  ++A+ ++   S  ++
Sbjct: 493 RVGRVDDAWSLVVEMSRKRH 512



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 229/439 (52%), Gaps = 6/439 (1%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           ++R   P L ++F +++       H   +YN ++  L + G H     V+  +   G  P
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSP 60

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N    +  +    +AG+   A   L       V    +++N L++ L K  N D+AV +F
Sbjct: 61  NLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLF 120

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISGLC 307
           +       +P+  T+N +I GL + G ++KA E   +M   G   +PDIVTYNTLI+   
Sbjct: 121 ENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY 180

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           R + +       +++K  +  +PDV+T   ++SG CK G +++A  I + M   G  P  
Sbjct: 181 RASRIREACAFREKMK-AAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           +T+N +I      G +V A    E + +    PD+VTF++L+DG+C+ G L + L++ +E
Sbjct: 240 ITYNSIIHALCVAGKVVEAA---EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEE 296

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  +N+ P+V T+TIL+N LC+  ++  A   L+++     +P    Y  ++DG CK+G 
Sbjct: 297 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 356

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           ++EA+ +V EM  + C+   V ++ L+ G+C  G + +A  I  +M+ I   P   T N 
Sbjct: 357 IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           ++  L+K G  ++A  ++ 
Sbjct: 417 VLGGLIKDGSISKAVSLIS 435



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 219/434 (50%), Gaps = 19/434 (4%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N    T N+++  +C+ G  +    + D M+  G +P+       + +   AGK   A 
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259

Query: 212 GLLSQFR--PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            +L      P  VT     +N+LL+   K      A+ + +E  R    PD  T+ IL+ 
Sbjct: 260 EILKTMSCSPDLVT-----FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 314

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL R+G+V+ AF    ++   G  PD++ Y +L+ GLC+  E+   H+L+KE+  +    
Sbjct: 315 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG-CR 373

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
             VV Y+S++SGYC+ G + KA  I  EM S  + P   T+N+++ G  K G++  A  +
Sbjct: 374 TGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSL 433

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              +++ GY+PDVVT+++LIDG C+  ++ +   L DEM  +   PN  T   ++  LC+
Sbjct: 434 ISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCR 493

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R++DA   + ++      P   +Y  +IDG CK+  +D+A +++  M  +    D   
Sbjct: 494 VGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFA 553

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  LI+     GR+ EA++++++M+  G  PD  T  +    L +  M N  F       
Sbjct: 554 YRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKT----LEEAAMSNSVF------- 602

Query: 570 EDQNLQLPSWKKAV 583
           E  NL+  +W   V
Sbjct: 603 EWTNLEENAWSDRV 616



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 189/381 (49%), Gaps = 4/381 (1%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M++ G  P+       VS   + G  + A  +L   +          YNS+++AL     
Sbjct: 195 MKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
             EA  + K    +   PD  TFN L+ G  + G + +A E   +M      PD++TY  
Sbjct: 255 VVEAAEILKT---MSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 311

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L++GLCRV +V     LL+E+  +  + PDV+ YTS++ G CK G++++A  +  EM+  
Sbjct: 312 LVNGLCRVGQVQVAFYLLEEI-VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G +   V ++ L+ G+ + GN+  A  +   M+S   +P + T++ ++ G  ++G +++ 
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 430

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           + L  ++  +   P+V T+  LI+ LCK NR+ +A     ++      P       V+ G
Sbjct: 431 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFG 490

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C+ G VD+A  +V EM  KR  P+ V +T LI G C   RM +A  + + M   G A D
Sbjct: 491 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALD 550

Query: 542 DITVNSLISCLLKGGMPNEAF 562
           D     LI  +  GG   EA 
Sbjct: 551 DFAYRKLIVSMSHGGRVAEAM 571



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
           +  DV +Y  ++    K G   +   +Y ++   G  P+ VTF +LI G  K G  + A 
Sbjct: 23  YKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRAL 82

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           E++R  +  F   PDV  F+ LI G  ++G  +Q +KL + M+   + P + T+  +I+ 
Sbjct: 83  EFLRA-LDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 447 LCKENRLNDARRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           LCK   L  AR  L+++  K     P    YN +I+ F +A  + EA     +M+     
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD +T  IL+ G C  G + EA+ I + M   G  PD IT NS+I  L   G   EA  I
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261

Query: 565 MQRAS 569
           ++  S
Sbjct: 262 LKTMS 266



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 4/177 (2%)

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           GY  DV +++ L+D   ++G   +  K+  ++     SPN+ TF ILI   CK  +   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             FL+ L    + P  +++N +I G  K GN D+A  +   ME  R KP+ VT+  +I G
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 517 HCMKGRMVEAISIFNKMLRIG--CAPDDITVNSLISCLLKGGMPNE--AFRIMQRAS 569
            C  G + +A  +  +M+R G   APD +T N+LI+   +     E  AFR   +A+
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 209/410 (50%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++R LC  G       +FD M  +G  PN       +    + G   AA  LL   
Sbjct: 146 TFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSM 205

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN++++ L K    +EA+ +F E       P+  T+N +I GL +  E 
Sbjct: 206 VQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEW 265

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K       +M      P++V + TL+  LC+   V   H+++ +V  +    PDVVTYT+
Sbjct: 266 KHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVV-DVMIQRGVEPDVVTYTA 324

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+C   +MD+A  +++ M   G  P+ ++++ LI+G+ K+  +  A Y+ E M    
Sbjct: 325 LMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRE 384

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P++VT+++LI G C  G+L   + L  EM      P++ T+ IL++ LCK   L+ A 
Sbjct: 385 LVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAM 444

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK ++ ++L P    YN VIDG C+ G ++ A  + + +  K   PD  T+TI+I G 
Sbjct: 445 AMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGL 504

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C++G + EA  +F +M   GC+PDD T N +    L+      A +++Q 
Sbjct: 505 CLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQE 554



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 167/311 (53%), Gaps = 1/311 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  DEA+  F     +   P    F  ++  ++ +            M S G   D+ T 
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
             +I+  C +N V  G  +L ++ FK    PD  T+T++I G C  GK+ +A  ++++M 
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKI-FKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P+ VT+  LI G  KVGN  +A  +   M+     P+V+T++++ID   ++ Q+N
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L +  EM  K +SPNV T+  +I+ LCK +        + ++  + ++P   ++  ++
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G V  A+ +V  M ++  +PD VT+T L+ GHC++  M EA  +F+ M+R GCA
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351

Query: 540 PDDITVNSLIS 550
           P+ I+ ++LI+
Sbjct: 352 PNVISYSTLIN 362



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 37/381 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +  +L ++    +    + + K+   L    D +T  I+I     +  V   F     + 
Sbjct: 77  FAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIF 136

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG-- 346
             G  PD  T+ TLI GLC   ++     L  ++     F P+ VTY ++I G CK+G  
Sbjct: 137 KLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM-VGEGFQPNGVTYGTLIHGLCKVGNS 195

Query: 347 ---------------------------------KMDKATGIYNEMNSCGIKPSAVTFNVL 373
                                            ++++A  I++EM + GI P+  T+N +
Sbjct: 196 RAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSI 255

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G  K         +   M+    +P+VV F++L+D  C+ G +     + D M  + +
Sbjct: 256 IHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV 315

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+V T+T L++  C  + +++A +    +      P    Y+ +I+G+CK   +D+A  
Sbjct: 316 EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMY 375

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  EM ++   P+ VT+  LI G C  GR+ +AI++F++M+  G  PD +T   L+  L 
Sbjct: 376 LFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC 435

Query: 554 KGGMPNEAFRIMQRASEDQNL 574
           K    ++A   M +A E  NL
Sbjct: 436 KTRHLDQAMA-MLKAIEGSNL 455



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 162/331 (48%), Gaps = 11/331 (3%)

Query: 141 KFLEFSRVNLSLNHSFKT--------YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           KF E+  V   +N    +        +  ++ +LC+ G+      V D M   G  P+  
Sbjct: 261 KFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVV 320

Query: 193 MIEFFVSS-CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                +   C+R+   +A K   +  R G    +   Y++L+N   K    D+A+Y+F+E
Sbjct: 321 TYTALMDGHCLRSEMDEADKVFDTMVRKG-CAPNVISYSTLINGYCKIQRIDKAMYLFEE 379

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
             +    P+  T+N LI GL  +G ++ A   F++M + G  PD+VTY  L+  LC+   
Sbjct: 380 MCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRH 439

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           + +   +LK ++  S  +PD+ +Y  VI G C++G+++ A  +++ ++S G+ P   T+ 
Sbjct: 440 LDQAMAMLKAIE-GSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYT 498

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           ++I+G    G +  A  +   M + G  PD  T++ +  G+ RN +    ++L  EM G+
Sbjct: 499 IMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGR 558

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQ 462
             S +  T T+++  L  +      ++ L +
Sbjct: 559 GFSADASTITLIVEMLSDDGLDQSVKQILHE 589



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 4/265 (1%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P VV +  +++    +        +  +M+S GI     T  ++I+ F  +  +     +
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++   G+ PD  TF++LI G C  G++ + L L D+M G+   PN  T+  LI+ LCK
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
                 A R L+ +   +  P    YN +ID   K   V+EA  I +EM  K   P+  T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI----M 565
           +  +I G C         ++ N+M+     P+ +   +L+  L K GM   A  +    +
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 566 QRASEDQNLQLPSWKKAVPLRTNTD 590
           QR  E   +   +      LR+  D
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMD 336


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 220/435 (50%), Gaps = 5/435 (1%)

Query: 137 KLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           +LG  F     +  L    S  T+  ++R LC  G       +FD M  +G  P+     
Sbjct: 104 RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 163

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             ++   + G    A   L          +  +Y++++++L K     EA+ +F +    
Sbjct: 164 TLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAK 223

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P+ +T++ LI GL  +G  K+A   FY M      PD +T+NTL+  LC+   V + 
Sbjct: 224 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKA 283

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           H ++ +V  +S+  PDVVTY S++ G+C   +M K   +++ M   G  PS +++  LI+
Sbjct: 284 HYVV-DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLIN 342

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G+ K+  M  A  + E M   G +PD VT+++LI G C  G+L   + L  EM      P
Sbjct: 343 GYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 402

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           ++ T+ IL + LCK +RL +A   LK ++  +L P   +Y+ V+DG C+AG ++ A  + 
Sbjct: 403 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 462

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           +++  K   PD  T+TI+I G C +G + EA  +F +M   GC+P+  T N +    L+ 
Sbjct: 463 SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRN 522

Query: 556 GMPNEAFRIMQRASE 570
              NE  R +Q   E
Sbjct: 523 ---NETLRAIQLFQE 534



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 182/387 (47%), Gaps = 1/387 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   ++ ++ S+  M  + +V  ++  M S G   N+  +   ++S     +   A  +L
Sbjct: 53  SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 112

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                     ST  + +L+  L  +    EA+ +F +      QPD  T+  LI GL ++
Sbjct: 113 GDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKV 172

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G    A  F   M    C P +V Y+T+I  LC+  ++     L  ++  K   SP+  T
Sbjct: 173 GNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKG-ISPNNFT 231

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+S+I G C LG   +A  ++  M    I P  +TFN L+D   K G +V A Y+ + M+
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                PDVVT++SL+DG+C   ++ + + + D M  K   P+V ++T LIN  CK   ++
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    +++    L+P    YN +I G C  G + +A  +  EM      PD VT+ IL 
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPD 541
              C   R+ EA+ +   +      PD
Sbjct: 412 DYLCKNHRLAEAMVLLKVIEGTNLDPD 438



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 172/371 (46%), Gaps = 1/371 (0%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
           F S  +     D A  L ++        S   ++ LL ++ +  +    + ++K+     
Sbjct: 25  FHSKSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFG 84

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
              +T+T NILI     +  +  AF    D+   G  P   T+ TLI GLC   ++    
Sbjct: 85  IPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEAL 144

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +L  ++  +  F PDV+TY ++I+G CK+G    A      M     +P+ V ++ +ID 
Sbjct: 145 QLFDKMTGEG-FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDS 203

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K   +  A  +   ML+ G  P+  T+SSLI G C  G   + ++L   M  + + P+
Sbjct: 204 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 263

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             TF  L++ALCKE  +  A   +  +  +DL P    YN ++DG C    + +   +  
Sbjct: 264 QLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFD 323

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K C P  +++T LI G+C    M +A+ +F +M + G  PD +T N+LI  L   G
Sbjct: 324 TMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 383

Query: 557 MPNEAFRIMQR 567
              +A  +   
Sbjct: 384 RLRDAIALFHE 394



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 155/366 (42%), Gaps = 71/366 (19%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D+A+ +F    R+   P    F+ L+  ++R+         +  M SFG   +  T 
Sbjct: 33  NTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTL 92

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N LI+                                     +C L ++  A  +  ++ 
Sbjct: 93  NILINS------------------------------------FCHLNRLGFAFSVLGDIL 116

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG--- 416
             G +PS  TF  LI G    G +  A  + ++M   G+ PDV+T+ +LI+G C+ G   
Sbjct: 117 KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTS 176

Query: 417 --------------------------------QLNQGLKLCDEMKGKNLSPNVYTFTILI 444
                                           QL + L L  +M  K +SPN +T++ LI
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 236

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           + LC      +A R    +    ++P    +N ++D  CK G V +A+ +V  M +   K
Sbjct: 237 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLK 296

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD VT+  L+ GHC++  M + +++F+ M+R GC P  I+  +LI+   K  + ++A  +
Sbjct: 297 PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGL 356

Query: 565 MQRASE 570
            +  S+
Sbjct: 357 FEEMSQ 362



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 1/156 (0%)

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++  L L + M      P++  F+ L+ ++ +    +      KQ+    +    +  N 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+ FC    +  A  ++ ++ +   +P   TFT LI G C++G++ EA+ +F+KM   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
             PD +T  +LI+ L K G  + A R + R+ E +N
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFL-RSMEQRN 189



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 39/175 (22%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           RL    + LK +E +    +L+     Y++VM  +C                        
Sbjct: 419 RLAEAMVLLKVIEGT----NLDPDIHIYSIVMDGMC------------------------ 450

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                      RAG+ +AA+ L S+     +      Y  ++N L +Q    EA  +F E
Sbjct: 451 -----------RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
                  P+  T+N++ +G  R  E  +A + F +M S G S D+ T   L+  L
Sbjct: 500 MDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 222/453 (49%), Gaps = 40/453 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++  LC+ G  ++   ++D M    G  P        +    R  + D    LL +
Sbjct: 67  TYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEE 126

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   YN+L+NAL+ Q  + EA  + ++       P+  TF ++I+GL + GE
Sbjct: 127 MAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE 186

Query: 277 VKKAFEFFYDMGSF--GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           ++ AF    +M     G SPD++T+N+++ GLC+   +   H + K    +    P+VVT
Sbjct: 187 IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA-LERGCRPNVVT 245

Query: 335 YTSVISGYCKLGKMDKATG-----------------------------------IYNEMN 359
           Y+++I G  K+ KMD+A                                     +  +M 
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  P AVT+N LIDGF K   +  A  +   ML  G+ P VVT+++L  G CR+G+ +
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV-PKPFMYNPV 478
           + +++ D M  +  +PN  T++ +++ LCK  R+ +A  + +++  +++V P    Y+ +
Sbjct: 366 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSAL 425

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           IDG CKAG +DEA   +  M      PD VTF+ILI G C  GR+   + +F  M   GC
Sbjct: 426 IDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGC 485

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            PD +T  +L+  L +    +EAF + Q+   D
Sbjct: 486 VPDMVTYATLVDRLCRASRVDEAFDLFQQMRSD 518



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 182/341 (53%), Gaps = 2/341 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           +++ L K    D+A+ +FK+       PD  T+  LI GL +   VK+A++ F +  + G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C P +VTYNT+I GLC+   +     L  ++     F P VVTY+++I G C+  ++DK 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             +  EM   G  P+AVT+N L++     G    A  + E+M + G  P+++TF  +I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 412 YCRNGQLNQGLKLCDE--MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            C+ G++    ++ DE  M    LSP+V TF  +++ LCKE R+ DA    K+       
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y+ +IDG  K   +DEA  ++A+M E  C+ + VT++ ++ G    GRM +A+ +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +M   GC PD +T N+LI    K     EA  +++   E
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 37/404 (9%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L  Q     +      Y +L++ L KQ    EA  +F+E       P   T+N
Sbjct: 10  KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 69

Query: 266 ILIQGLSRIGEVKKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-- 322
            +I GL + G ++ A   + DM   FG  P +VTY+TLI GLCR +EV +G +LL+E+  
Sbjct: 70  TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129

Query: 323 ---------------------KFKSEFS-----------PDVVTYTSVISGYCKLGKMDK 350
                                + K  FS           P+++T+  +I G CK G+++ 
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189

Query: 351 ATGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           A  + +EM     G+ P  +TFN ++DG  K   ++ A  + +R L  G  P+VVT+S+L
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 249

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG  +  ++++ L+L  +M       N  T++ +++ L K  R+ DA   L+Q++    
Sbjct: 250 IDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC 309

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P    YN +IDGF K   + EA  ++ EM E    P  VT+T L  G C  GR  EA+ 
Sbjct: 310 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 369

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           I + M   GCAP+ IT +S++  L K G   EA    ++ + D+
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 413



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 213/410 (51%), Gaps = 4/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +L   G       + + M ++G  P        +    + G+ +AA  ++ + 
Sbjct: 138 TYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 197

Query: 218 RPGEVTMS--TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
              E  +S     +NS+L+ L K+    +A  +FK       +P+  T++ LI GLS++ 
Sbjct: 198 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 257

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++ +A +    M   GC  + VTY+T++ GL +V  +     +L++++  +   PD VTY
Sbjct: 258 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR-DAGCLPDAVTY 316

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I G+ K  ++ +A G+  EM   G  PS VT+  L  G  + G    A  + + M +
Sbjct: 317 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRLN 454
            G  P+ +T+SS++DG C+ G++ + L   ++M + + ++P+V  ++ LI+ LCK  +++
Sbjct: 377 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKID 436

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A  FL+++     +P    ++ +I+G C AG +D    +   M E+ C PD VT+  L+
Sbjct: 437 EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLV 496

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              C   R+ EA  +F +M   G +PD  T  ++I  LL+     +A RI
Sbjct: 497 DRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 172/355 (48%), Gaps = 2/355 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E   +   L+    T+N V+  LC+         VF      G  PN       +    +
Sbjct: 196 EMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSK 255

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
             K D A  LL++        +T  Y+++++ L+K    ++AV + ++       PD  T
Sbjct: 256 MAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVT 315

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N LI G  +   +++A     +M   G  P +VTY TL  GLCR        E+L  + 
Sbjct: 316 YNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMA 375

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGN 382
            +   +P+ +TY+S++ G CK G++ +A G + +M     + P  + ++ LIDG  K G 
Sbjct: 376 ARG-CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A    ERM+  G +PDVVTFS LI+G C  G+++ GL+L   M  +   P++ T+  
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           L++ LC+ +R+++A    +Q++ + L P       +I G  +    ++A  I  E
Sbjct: 495 LVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 208/421 (49%), Gaps = 1/421 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S V   + H   T+N+++++LC+        ++ + M S G  P+       +   I  G
Sbjct: 193 SMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGG 252

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             D A  +  Q        +    N L+N   KQ   D+A+   +E      +PD +T+N
Sbjct: 253 NLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYN 312

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            L+ GL +IG  K A E    M   G  PDI TYN+LISGLC++ E+    ++L ++   
Sbjct: 313 TLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM-VS 371

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
            + SP+ VTY ++IS  CK  ++D+AT I   + S GI P   TFN LI G     N  S
Sbjct: 372 RDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKS 431

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + E M   G  PD  T++ LID  C + +L + L L  EM+    + NV  +  LI+
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID 491

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             CK  R+ +A     +++   +      YN +IDG CK+  V++A  ++ +M  +  +P
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           DK T+  L+   C  G + +A  I   M   GC PD +T  +LIS L K G    A R++
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611

Query: 566 Q 566
           +
Sbjct: 612 R 612



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 196/389 (50%), Gaps = 10/389 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC++G       V D M   G  P+       +S   + G+ + A  +L Q 
Sbjct: 310 TYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM 369

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ----PDTWTFNILIQGLSR 273
              + + +   YN+++++L K+N  DEA     E  RL +     PD  TFN LIQGL  
Sbjct: 370 VSRDCSPNAVTYNAIISSLCKENRVDEAT----EIARLLTSKGILPDVCTFNSLIQGLCL 425

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
               K A + F +M   GC PD  TYN LI  LC   ++     LLKE++     + +VV
Sbjct: 426 SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG-CARNVV 484

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y ++I G+CK  ++++A  I++EM   G+   +VT+N LIDG  K   +  A  + ++M
Sbjct: 485 IYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  PD  T++SL+  +C+ G + +   +   M     +P++ T+  LI+ LCK  R+
Sbjct: 545 IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRV 604

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A R L+ ++   +V  P  YNPVI    K     EA  +  EM +K   PD +T+ I+
Sbjct: 605 QVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664

Query: 514 IIGHCMKGRMV-EAISIFNKMLRIGCAPD 541
             G C  G  + EA+    +M+  G  P+
Sbjct: 665 YRGLCNGGGPIGEAVDFTVEMIERGNIPE 693



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 223/524 (42%), Gaps = 72/524 (13%)

Query: 114 ARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHD 173
             +L    +P   +E ++R  +    L+   ++    +   S   Y  ++R L + G  +
Sbjct: 55  VHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFE 114

Query: 174 SVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG-EVTMSTFMYNSL 232
            ++ V + M+  G   +  +   FV S  +    D   G++        +   T  YN L
Sbjct: 115 YMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVL 174

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           LN LV  N             R   + D  TFNILI+ L +  +V+ A     +M S+G 
Sbjct: 175 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGL 234

Query: 293 SPD-----------------------------------IVTYNTLISGLCRVNEVARGHE 317
           SPD                                    VT N LI+G C+   + +   
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 294

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
            ++E      F PD  TY ++++G CK+G    A  + + M   G+ P   T+N LI G 
Sbjct: 295 FIQEA-VSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 378 GKVGNMVSAEYMRERMLSF-----------------------------------GYLPDV 402
            K+G +  A  + ++M+S                                    G LPDV
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
            TF+SLI G C +      + L +EMKGK   P+ +T+ +LI++LC   +L +A   LK+
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           ++ N       +YN +IDGFCK   ++EA  I  EME +    D VT+  LI G C   R
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 533

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           + +A  + ++M+  G  PD  T NSL++   K G   +A  I+Q
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQ 577



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 24/315 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ SLC     +    +   M  +G   N  +    +    +  + + A+ +  + 
Sbjct: 450 TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM 509

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+  +  YN+L++ L K    ++A  +  +      +PD +T+N L+    + G++
Sbjct: 510 ELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDI 569

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-FSPDVVTYT 336
           KKA +    M S GC+PDIVTY TLISGLC+   V     LL+ ++ K    +P    Y 
Sbjct: 570 KKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPH--AYN 627

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV----LIDGFGKVGNMVSAEYMRER 392
            VI    K  +  +A  ++ EM      P A+T+ +    L +G G +G  V        
Sbjct: 628 PVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVD---FTVE 684

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G +P+  +F  L +G C     +  +KL D               I+  A   E  
Sbjct: 685 MIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVD--------------MIMEKAKFSERE 730

Query: 453 LNDARRFLKQLKWND 467
           ++  R FLK  K+ D
Sbjct: 731 ISTIRGFLKIRKFQD 745



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 7/208 (3%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMR---ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           PS+  +  ++   GK G   S EYMR   E M   G   D   F   ++ Y +    ++ 
Sbjct: 95  PSSSVYEEILRKLGKAG---SFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEV 151

Query: 422 LKLCDEMKGK-NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
           + +   M+ +  + P+   + +L+N L   N+L         +    +      +N +I 
Sbjct: 152 VGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIK 211

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             CKA  V  A +++ EM      PD+ TFT ++ G+   G +  A+ I  +M+  GC  
Sbjct: 212 ALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPC 271

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRA 568
            D+TVN LI+   K G  ++A   +Q A
Sbjct: 272 TDVTVNVLINGFCKQGRIDQALSFIQEA 299



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 8/206 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G       +   M S G  P+       +S   +AG+   A  LL   
Sbjct: 555 TYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSI 614

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG-E 276
           +   + ++   YN ++ AL K+N   EA+ +F+E       PD  T+ I+ +GL   G  
Sbjct: 615 QMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGP 674

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A +F  +M   G  P+  ++  L  GLC ++      +L+  +  K++FS   +   
Sbjct: 675 IGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREI--- 731

Query: 337 SVISGYCKLGKMDKAT----GIYNEM 358
           S I G+ K+ K   A     GI ++M
Sbjct: 732 STIRGFLKIRKFQDALSTLGGILDDM 757


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 220/410 (53%), Gaps = 2/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N V     + G  + V+ V+  M   G+   +      +S   + G  D A  LL   
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          Y++++N L K N  +EA  + ++  R Y+ PD  T+  +++ L +   +
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-YAPPDALTYGPIVERLCKTKRI 130

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M + G  PD   YN ++SGLC+  +V     LL E   K   +P+VVTY +
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR-LLFEKMVKQRINPNVVTYNT 189

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK  +++ A  ++ EM   G  P+ V++N LIDGF K  ++V+A+ + ++M+   
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN 249

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+VVT+++LIDG  ++G++    ++ D M  K ++PNV T++ LI+  CK  R+++A 
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L+Q+    + P    YN +++  C+A  +++A  +   M ++RC P  VT+  L+   
Sbjct: 310 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   ++  A  ++ +M+  GC PD IT ++L   L + G  +EA  +M++
Sbjct: 370 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 173/347 (49%), Gaps = 2/347 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++  LC++   +  + + + M      P++      V    +  + D A   + +  
Sbjct: 83  YSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCKTKRIDDALATVEEMA 141

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    F+YN +L+ L ++   +EA  +F++  +    P+  T+N LI GL +   ++
Sbjct: 142 TRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIE 201

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A+E F +M   G  P  V+YNTLI G C+  ++    ++  ++  +S   P+VVTYT++
Sbjct: 202 TAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM-VRSNCVPNVVTYTTL 260

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G  K GK+  A  + + M   G+ P+  T++ LIDGF KV  +  A  + E+M++ G 
Sbjct: 261 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 320

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P VVT++ L++  CR  +L    KL   M  +   P V T+  L+ ALC   +L+ A R
Sbjct: 321 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 380

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              ++      P    Y+ +  G  +AG V EA  ++ +M+  +  P
Sbjct: 381 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 154/309 (49%), Gaps = 2/309 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P   TFN +  G ++ G +++  E +  M   G +     Y  LIS LC+V      ++L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  ++ K  F    + Y+++I+  CKL ++++A  +  +M      P A+T+  +++   
Sbjct: 68  LHTMRLK-RFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLC 125

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   +  A    E M + G  PD   ++ ++ G C+  ++ +   L ++M  + ++PNV 
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  LIN LCK  R+  A    K++     VP    YN +IDGFCK  ++  A  +  +M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
               C P+ VT+T LI G    G++  A  + + M++ G  P+  T + LI    K    
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 559 NEAFRIMQR 567
           +EA +++++
Sbjct: 306 DEAHKLLEQ 314



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 1/246 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   +N +  TYN ++  LC+    ++   +F  M   G++P        +    +    
Sbjct: 176 VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 235

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            AAK +  +        +   Y +L++ L K      A  +     +    P+  T++ L
Sbjct: 236 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 295

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  ++  V +A +    M + G +P +VTYN L++ LCR +++    +L + +  +  
Sbjct: 296 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA-QRR 354

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P VVTY +++   C   ++D A  +Y EM + G  P A+T++ L  G  + G +  A+
Sbjct: 355 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 414

Query: 388 YMRERM 393
            + E+M
Sbjct: 415 ELMEKM 420



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 77/167 (46%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L + G   +   V D M   G  PN       +    +  + D A  LL Q 
Sbjct: 256 TYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM 315

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN LLN+L + +  ++A  +F+   +    P   T+N L++ L    ++
Sbjct: 316 VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 375

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
             A   + +M + GC PD +TY+TL  GL R  +V    EL++++K 
Sbjct: 376 DGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKL 422



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 36/203 (17%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQ-----------------------------------GLK 423
           +P   TF+++ DG+ + G+L Q                                     K
Sbjct: 7   IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L   M+ K        ++ +IN LCK NR+ +AR  ++++      P    Y P+++  C
Sbjct: 67  LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLC 125

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K   +D+A   V EM  +  KPD   +  ++ G C + ++ EA  +F KM++    P+ +
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
           T N+LI+ L K      A+ + +
Sbjct: 186 TYNTLINGLCKAWRIETAYELFK 208


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/432 (32%), Positives = 223/432 (51%), Gaps = 15/432 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY L + +LC +   +    +   M+  G  PN       +S   R GK + A GL  + 
Sbjct: 347 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 406

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +T  YN+L+N L        A+ +F       S  +T T+N +I+GL   G++
Sbjct: 407 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 466

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVT 334
           +KA   F  M   G  P +VTYNTLI+G      VN  AR  +L+KE    +   PD  T
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE----NGCEPDEWT 522

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  ++SG+ K GK++ A+  + EM  CG+ P+ V++  LIDG  K G +  A  + ERM 
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+V +++++I+G  +  + ++  K+CD+M  + L PNV T+T LI+ LC+  R  
Sbjct: 583 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQ 642

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A +    ++    +P  + Y+ +I G C+ G  DEA +++ EME K   PD+VTFT LI
Sbjct: 643 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLI 702

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI-----SCLL---KGGMPNEAFRIMQ 566
            G  + GR+  A  +  +M+ +GC P+  T + L+      CLL   K  + +EA     
Sbjct: 703 DGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFS 762

Query: 567 RASEDQNLQLPS 578
              +D N ++ S
Sbjct: 763 PHEKDVNFEIVS 774



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 179/363 (49%), Gaps = 1/363 (0%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A+ L  Q     +  S   +N+L+N L K+    EA  +  + F+    PD +T+  L
Sbjct: 222 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 281

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  R   +  AF  F  M   GC P+ VTY+TLI+GLC    V    ++L+E+  K  
Sbjct: 282 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG- 340

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P V TYT  I+  C +   ++A  +   M   G +P+  T+  LI G  ++G +  A 
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 400

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +ML  G +P+ VT+++LI+  C  G+ +  LK+   M+G     N  T+  +I  L
Sbjct: 401 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 460

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C    +  A    +++     +P    YN +I+G+   GNV+ A  ++  M+E  C+PD+
Sbjct: 461 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 520

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+  L+ G    G++  A   F +M+  G  P+ ++  +LI    K G  + A  +++R
Sbjct: 521 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLER 580

Query: 568 ASE 570
             E
Sbjct: 581 MEE 583



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 192/429 (44%), Gaps = 25/429 (5%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN +++ LC  G  +   V+F+ M   G LP        ++  +  G  + A  LL  
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +        + YN L++   K    + A + F+E       P+  ++  LI G S+ G+
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A      M   GC+P++ +YN +I+GL + N  +   ++  ++  +    P+V+TYT
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA-EQGLLPNVITYT 629

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G C+ G+   A  I+++M      P+  T++ LI G  + G    AE + + M   
Sbjct: 630 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 689

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD VTF+SLIDG+   G+++    L   M      PN  T+++L+  L KE  L + 
Sbjct: 690 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEE 749

Query: 457 R------------------------RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +                          L ++      P    Y+ ++ G C+ G   EA 
Sbjct: 750 KVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAE 809

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +V +M+E+   PD+  +  L+I HC    +  A+ IF+ +   G         +LI  L
Sbjct: 810 QLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICAL 869

Query: 553 LKGGMPNEA 561
            K G   EA
Sbjct: 870 CKAGQVEEA 878



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 219/502 (43%), Gaps = 18/502 (3%)

Query: 71  GLANGGSRPFDEKEVNYRCSNEFW--FVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLE 128
           G  N  S+P          S E +   V  VC +L R  +   +  + L  +L   +  E
Sbjct: 63  GFLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAE 122

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           ++    + +  ++F  +        H+   +  ++  L    + D V    D++R     
Sbjct: 123 IVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRL----VRDRVFAPADHIRI---- 174

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
                    + +C    +       L++        S +  N+LL  L K    + A  +
Sbjct: 175 -------LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 227

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           +K+      QP   TFN LI  LS+ G+V++A      +  +  SPD+ TY +LI G CR
Sbjct: 228 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 287

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              +     +   +  K    P+ VTY+++I+G C  G++D+A  +  EM   GI+P+  
Sbjct: 288 NRNLDLAFGVFDRM-VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 346

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+ + I     + +   A  +  RM   G  P+V T+++LI G  R G+L   + L  +M
Sbjct: 347 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 406

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             + L PN  T+  LIN LC   R + A +    ++ +  +     YN +I G C  G++
Sbjct: 407 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 466

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           ++A V+  +M +    P  VT+  LI G+  KG +  A  + + M   GC PD+ T N L
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 526

Query: 549 ISCLLKGGMPNEAFRIMQRASE 570
           +S   K G    A    Q   E
Sbjct: 527 VSGFSKWGKLESASFYFQEMVE 548



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 194/423 (45%), Gaps = 19/423 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  +S    F  M   G  PN       +    + GK D A  LL + 
Sbjct: 522 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM 581

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+++N L K+N   EA  +  +       P+  T+  LI GL R G  
Sbjct: 582 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRT 641

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF+ F+DM    C P++ TY++LI GLC+  +      LLKE++ K   +PD VT+TS
Sbjct: 642 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG-LAPDEVTFTS 700

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY--MRERMLS 395
           +I G+  LG++D A  +   M   G KP+  T++VL+ G  K   ++  +     E + S
Sbjct: 701 LIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYS 760

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           F      V F  + +   R  ++      C+        P + T++ L++ LC++ R  +
Sbjct: 761 FSPHEKDVNFEIVSNLLARMSEIG-----CE--------PTLDTYSTLVSGLCRKGRFYE 807

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A + +K +K     P   +Y  ++   CK   VD A  I   +E K  +     +  LI 
Sbjct: 808 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALIC 867

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIMQRASEDQ 572
             C  G++ EA ++F+ ML      D+I    L+  LLK G   +  +   IM+  +   
Sbjct: 868 ALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTP 927

Query: 573 NLQ 575
           N+Q
Sbjct: 928 NIQ 930



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 1/310 (0%)

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           ++ N L+  L++   V+ A   +  M + G  P ++T+NTLI+ L +  +V     +L +
Sbjct: 206 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 265

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F+ + SPDV TYTS+I G+C+   +D A G+++ M   G  P++VT++ LI+G    G
Sbjct: 266 I-FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 324

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  M E M+  G  P V T++  I   C      + ++L   MK +   PNV T+T
Sbjct: 325 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 384

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ L +  +L  A     ++    LVP    YN +I+  C  G    A  I   ME  
Sbjct: 385 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 444

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               +  T+  +I G C+ G + +A+ +F KML++G  P  +T N+LI+  L  G  N A
Sbjct: 445 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 504

Query: 562 FRIMQRASED 571
            R++    E+
Sbjct: 505 ARLLDLMKEN 514



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 169/386 (43%), Gaps = 22/386 (5%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N + ++YN V+  L +       + + D M   G LPN       +    R G+   A  
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +       +   + + Y+SL+  L ++  ADEA  + KE  R    PD  TF  LI G  
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 706

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL---CRVNE--VARGHELLKEVKFKSE 327
            +G +  AF     M   GC P+  TY+ L+ GL   C + E  VA  HE +        
Sbjct: 707 VLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAV------YS 760

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           FSP           + K    +  + +   M+  G +P+  T++ L+ G  + G    AE
Sbjct: 761 FSP-----------HEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAE 809

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M   G+ PD   + SL+  +C+N +++  LK+   ++ K    ++  +  LI AL
Sbjct: 810 QLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICAL 869

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  ++ +A+     +   +      ++  ++DG  K G +D    ++  ME K   P+ 
Sbjct: 870 CKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNI 929

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
            T+ IL       G+ +E+  + +K+
Sbjct: 930 QTYVILGRELSRIGKSIESEPLADKL 955



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 147/331 (44%), Gaps = 25/331 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC  G       +F  M     LPN       +    + GK D A+ LL + 
Sbjct: 627 TYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM 686

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR---I 274
               +      + SL++  V     D A  + +    +  +P+  T+++L++GL +   +
Sbjct: 687 ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLL 746

Query: 275 GEVKKAFE---------------------FFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
            E K A +                         M   GC P + TY+TL+SGLCR     
Sbjct: 747 LEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFY 806

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              +L+K++K +  F PD   Y S++  +CK  ++D A  I++ + + G +     +  L
Sbjct: 807 EAEQLVKDMKERG-FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 865

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I    K G +  A+ + + ML   +  D + ++ L+DG  + G+L+  +KL   M+ KN 
Sbjct: 866 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 925

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +PN+ T+ IL   L +  +  ++     +LK
Sbjct: 926 TPNIQTYVILGRELSRIGKSIESEPLADKLK 956


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 212/407 (52%), Gaps = 2/407 (0%)

Query: 159 YNLVMRSLCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +N ++ ++ +M   HD+V  +   M   G  P++  +   ++   +  + D    +L++ 
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + ++   +N+L+N L K     +AV +F +      QPD  T+  +I GL +IGE 
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  MG  GC PD+VTY+T+I  LC+   V    ++   +K K   SP++ TY S
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG-ISPNIFTYNS 302

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   +  +A+ + NEM S  I P+ VTF++LI+ F K GN+  A  + + M   G
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT+SSL++GY    ++ +  KL D M  K   P+V+++ ILIN  CK  R+ +A+
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    L P    YN +IDG C+ G + EA+ +   M      PD  T++IL+ G 
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C +G + +A  +F  M      P+ +  N LI  + K     EA ++
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKL 529



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 205/432 (47%), Gaps = 36/432 (8%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + L L  +  T+N ++  LC++G       +FD M + G+ P+       ++   + G+ 
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243

Query: 208 DAAKGLLSQF-----RPGEVTMST------------------------------FMYNSL 232
            AA GL  +      +P  VT ST                              F YNSL
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           +  L   +   EA  M  E   L   P+  TF++LI    + G V +A      M   G 
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P++VTY++L++G     EV    +L  +V       PDV +Y  +I+GYCK  ++ +A 
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLF-DVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++NEM   G+ P  V++N LIDG  ++G +  A  + + ML+ G LPD+ T+S L+DG+
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G L +  +L   M+   L PN+  + ILI+A+CK   L +AR+   +L    L P  
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNV 542

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            +Y  +I+G CK G +DEA      MEE  C P++ ++ ++I G         A+ +  +
Sbjct: 543 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE 602

Query: 533 MLRIGCAPDDIT 544
           M   G   D  T
Sbjct: 603 MREKGFVADVAT 614



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 186/347 (53%), Gaps = 2/347 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +N LL+A+VK  +  +AV    +   L    PDT+T ++LI    ++  V   F     +
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G    IVT+NTLI+GLC+V +  +  EL  ++  +  + PDV TYT++I+G CK+G+
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG-YQPDVHTYTTIINGLCKIGE 242

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
              A G++ +M   G +P  VT++ +ID   K   +  A  +   M + G  P++ T++S
Sbjct: 243 TVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 302

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI G C   +  +   + +EM   N+ PN+ TF++LIN  CKE  + +AR  LK +    
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    Y+ +++G+     V EA  +   M  K CKPD  ++ ILI G+C   R+ EA 
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            +FN+M+  G  PD ++ N+LI  L + G   EA  + +    + NL
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNL 469



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 184/359 (51%), Gaps = 1/359 (0%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           DA   L  Q     ++  T+  + L+N   +    D    +  +  +L  Q    TFN L
Sbjct: 139 DAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTL 198

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL ++G+  +A E F DM + G  PD+ TY T+I+GLC++ E      L +++  ++ 
Sbjct: 199 INGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMG-EAG 257

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDVVTY+++I   CK  ++++A  I++ M + GI P+  T+N LI G         A 
Sbjct: 258 CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREAS 317

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M   M+S   +P++VTFS LI+ +C+ G + +   +   M    + PNV T++ L+N  
Sbjct: 318 AMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGY 377

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
             +  + +AR+    +      P  F YN +I+G+CKA  + EA  +  EM  +   PD 
Sbjct: 378 SLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDI 437

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           V++  LI G C  GR+ EA  +F  ML  G  PD  T + L+    K G   +AFR+ +
Sbjct: 438 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR 496



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 173/322 (53%), Gaps = 2/322 (0%)

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA-FEFFYDMGSFGCSPDIVTY 299
           N D+A+  F        +P    FN L+  + ++     A       M   G SPD  T 
Sbjct: 101 NIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTL 160

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + LI+   ++  V  G  +L ++  K      +VT+ ++I+G CK+GK  +A  ++++M 
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKI-IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           + G +P   T+  +I+G  K+G  V+A  +  +M   G  PDVVT+S++ID  C++ ++N
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L +   MK K +SPN++T+  LI  LC  +R  +A   L ++   +++P    ++ +I
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           + FCK GNV EA  ++  M E   +P+ VT++ L+ G+ ++  +VEA  +F+ M+  GC 
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCK 399

Query: 540 PDDITVNSLISCLLKGGMPNEA 561
           PD  + N LI+   K     EA
Sbjct: 400 PDVFSYNILINGYCKAKRIGEA 421


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 213/435 (48%), Gaps = 2/435 (0%)

Query: 133 LDNPKLGLKFLEFSR-VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           +D  KL L  +  SR V+  +     T+N+++++LC         ++ + M S G  P+ 
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +   I  G  + A  +  Q        S    N L++   K+   +E +    E
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                 +PD +TFN L+ GL RIG VK A E    M   G  PDI TYN+LI GLC++ E
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           V    E+L ++  + +FSP+ VTY ++IS  CK  ++++AT +   + S GI P   TFN
Sbjct: 367 VEEAVEILNQMILR-DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            LI G     N   A  + E M + G  PD  T++ LID  C  G+L + L L  EM+  
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
             S NV T+  LI+  CK  R+ +A     +++   +      YN +IDG CK   V+EA
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEA 545

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++ +M  +  KPDK T+  L+   C  G + +A  I   M   GC PD +T  +LI  
Sbjct: 546 AQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG 605

Query: 552 LLKGGMPNEAFRIMQ 566
           L K G    A R+++
Sbjct: 606 LSKAGRVELASRLLR 620



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 209/409 (51%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  L +      V++V   M S G  P+       + +  RA +   A  ++ + 
Sbjct: 178 TYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM 237

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++     + +L+   +++ N + A+ + ++           T N+L+ G  + G +
Sbjct: 238 GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRI 297

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++   F  +M + G  PD  T+N+L++GLCR+  V    E+L +V  +  F PD+ TY S
Sbjct: 298 EEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL-DVMLQEGFDPDIFTYNS 356

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CKLG++++A  I N+M      P+ VT+N LI    K   +  A  +   + S G
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV TF+SLI G C        ++L +EMK K   P+ +T+ +LI++LC   RL +A 
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEAL 476

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK+++ +        YN +IDGFCK   ++EA  I  EME +    + VT+  LI G 
Sbjct: 477 SLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGL 536

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C   R+ EA  + ++ML  G  PD  T NSL++   + G   +A  I+Q
Sbjct: 537 CKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQ 585



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 224/459 (48%), Gaps = 2/459 (0%)

Query: 107 SYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL 166
           S LS +    L +  +P    + ++R  +    L  L+++    +   S   Y  V+R L
Sbjct: 56  STLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKL 115

Query: 167 CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG-EVTMS 225
            + G   S++ V   M+  G           + S  +    D A  ++        + + 
Sbjct: 116 GKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLD 175

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            F YN LLN LV  N       +         +PD  TFNILI+ L R  +++ A     
Sbjct: 176 AFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMME 235

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +MGS+G SPD  T+ TL+ G      +  G   ++E    +      VT   ++ GYCK 
Sbjct: 236 EMGSYGLSPDEKTFTTLMQGFIEEGNM-NGALRIREQMVAAGCPSSNVTVNVLVHGYCKE 294

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G++++     +EM++ G +P   TFN L++G  ++G++  A  + + ML  G+ PD+ T+
Sbjct: 295 GRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTY 354

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +SLI G C+ G++ + +++ ++M  ++ SPN  T+  LI+ LCKEN++ +A    + L  
Sbjct: 355 NSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTS 414

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             ++P    +N +I G C   N   A  +  EM+ K C PD+ T+ +LI   C +GR+ E
Sbjct: 415 KGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEE 474

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           A+S+  +M   GC+ + +T N+LI    K     EA  I
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEI 513



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 193/401 (48%), Gaps = 1/401 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++   C+ G  + V    D M ++G  P+       V+   R G    A  +L   
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                    F YNSL+  L K    +EAV +  +       P+T T+N LI  L +  +V
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E    + S G  PD+ T+N+LI GLC  N      EL +E+K K    PD  TY  
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG-CHPDEFTYNM 461

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C  G++++A  +  EM S G   + VT+N LIDGF K   +  AE + + M   G
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +VVT+++LIDG C+N ++ +  +L D+M  + L P+ +T+  L+   C+   +  A 
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAA 581

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++ +  N   P    Y  +I G  KAG V+ A+ ++  ++ K       T+  +I   
Sbjct: 582 DIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKAL 641

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             + R  EA+ +F +M+  G  PD +T   +   L  GG P
Sbjct: 642 FREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGP 682



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 190/414 (45%), Gaps = 37/414 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC +G       + D M  +G  P+       +    + G+ + A  +L+Q 
Sbjct: 318 TFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM 377

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              + + +T  YN+L++ L K+N  +EA  + +        PD  TFN LIQGL      
Sbjct: 378 ILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNH 437

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E F +M + GC PD  TYN LI  LC    +     LLKE++  S  S +VVTY +
Sbjct: 438 RLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEME-SSGCSRNVVTYNT 496

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK  ++++A  I++EM   GI  + VT+N LIDG  K   +  A  + ++ML  G
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T++SL+  +CR G + +   +   M      P+  T+  LI  L K  R+  A 
Sbjct: 557 LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELAS 616

Query: 458 RFLKQLKWNDLVPKPFMYNPVID-----------------------------------GF 482
           R L+ ++   +V  P  YNPVI                                    G 
Sbjct: 617 RLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676

Query: 483 CKAGN-VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           C  G  + EA   + EM +K   PD  +F +L  G C        I + N++++
Sbjct: 677 CSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMK 730



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 148/329 (44%), Gaps = 15/329 (4%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           +N +L ++  E  +        F TYN+++ SLC  G  +    +   M S G   N   
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEF-TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVT 493

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               +    +  + + A+ +  +     ++ +   YN+L++ L K    +EA  +  +  
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
               +PD +T+N L+    R G++KKA +    M S GC PD VTY TLI GL +   V 
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVE 613

Query: 314 RGHELLKEVKFKSE-FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               LL+ V+ K    +P   TY  VI    +  +  +A  ++ EM   G  P AVT+ V
Sbjct: 614 LASRLLRTVQLKGMVLAPQ--TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKV 671

Query: 373 LIDGF----GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE- 427
           +  G     G +G  V  +++ E M   G+LPD  +F  L +G C     +  +KL +  
Sbjct: 672 VFRGLCSGGGPIGEAV--DFLVE-MTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRV 728

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDA 456
           MK  N S +  +   +I    K  +  DA
Sbjct: 729 MKQANFSDSEVS---MIMGFLKIRKFQDA 754



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 1/273 (0%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P   T   L   L R ++     +LL     +  F P  V Y  V+    K G       
Sbjct: 67  PQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRR 126

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS-FGYLPDVVTFSSLIDGY 412
           +  EM   G +    TF +LI+ + K      A  + + M   FG   D  T++ L++  
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL 186

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
               +L     +   M  + + P+V TF ILI ALC+ +++  A   ++++    L P  
Sbjct: 187 VDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDE 246

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             +  ++ GF + GN++ A  I  +M    C    VT  +L+ G+C +GR+ E +S  ++
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           M   G  PD  T NSL++ L + G    A  I+
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL 339


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 213/386 (55%), Gaps = 3/386 (0%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   ++EF  F+ S  +  +      L +Q     VT + +  N L+N L + N+   A+
Sbjct: 88  PRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAI 147

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  + F+L  QPD  TFN LI G    GE+K+A   F +M   G  PD+++Y+T+I+GL
Sbjct: 148 SVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGL 207

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+    +   +LL++++ K    P++V YT++I   CK   ++ A  + +EM   GI P 
Sbjct: 208 CKSGNTSMALQLLRKMEEKG-CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPD 266

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT++ ++ GF  +G++  A  +   M+    +P+ VTF+ L+DG C+ G +++   + +
Sbjct: 267 VVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFE 326

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M  K   PN YT+  L++  C  N++++A++ L  +      P    YN +I+G+CK  
Sbjct: 327 AMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRR 386

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +DEA  ++ EM EK   PD VT++ L+ G C  GR  EA+++F +M   G  PD +T +
Sbjct: 387 RLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYS 446

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQ 572
           +L+  L K G  +EA ++++   E +
Sbjct: 447 TLLDGLCKHGHLDEALKLLKSMQESK 472



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 205/431 (47%), Gaps = 52/431 (12%)

Query: 174 SVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           S+ VV  +M    +L  P+ P   FF    I    C   + L  Q   G      F+ N+
Sbjct: 17  SIWVVQQHMEMGFYLFLPDFPSFLFFNHHHITTSTCTKKRSL-PQNNGG------FLSNN 69

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
            ++        D+A+  F    R+  +P    F   +  +++  +          M  FG
Sbjct: 70  SISI-------DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFG 122

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
            + ++ + N LI+ LCR+N V     +L ++ FK    PD +T+ ++I+G C  G++ +A
Sbjct: 123 VTHNVYSLNILINCLCRLNHVVFAISVLGKM-FKLGIQPDAITFNTLINGRCIEGEIKEA 181

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA----EYMRER--------------- 392
            G++NEM   G +P  ++++ +I+G  K GN   A      M E+               
Sbjct: 182 VGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS 241

Query: 393 ----------------MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
                           M+  G  PDVVT+S+++ G+C  G LN+   L +EM G+N+ PN
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             TFTIL++ LCKE  +++AR   + +      P  + YN ++DG+C    +DEA  ++ 
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M +K C P   ++ ILI G+C + R+ EA S+  +M      PD +T ++L+  L + G
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421

Query: 557 MPNEAFRIMQR 567
            P EA  + + 
Sbjct: 422 RPQEALNLFKE 432



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 188/392 (47%), Gaps = 1/392 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ V+  LC+ G       +   M   G  PN       + S  +    + A  LLS+ 
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+++L+      + +EA  +F E       P+T TF IL+ GL + G V
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  P+  TYN L+ G C  N++    ++L ++      +P V +Y  
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL-DIMVDKGCAPVVHSYNI 377

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  ++D+A  +  EM+   + P  VT++ L+ G  +VG    A  + + M S G
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD++T+S+L+DG C++G L++ LKL   M+   + P++  + ILI  +    +L  A+
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAK 497

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +L  + + P    Y  +I G  K G  DEA  +  +ME+    P+  ++ ++I G 
Sbjct: 498 ELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGF 557

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
                   AI + ++M+    + D  T   L+
Sbjct: 558 LQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 197/408 (48%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C  G       +F+ M   GH P+       ++   ++G    A  LL + 
Sbjct: 164 TFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM 223

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y +++++L K    ++A+ +  E       PD  T++ ++ G   +G +
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M      P+ VT+  L+ GLC+   V+    +  E   K    P+  TY +
Sbjct: 284 NEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF-EAMTKKGAEPNAYTYNA 342

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC   +MD+A  + + M   G  P   ++N+LI+G+ K   +  A+ +   M    
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+S+L+ G C+ G+  + L L  EM    L P++ T++ L++ LCK   L++A 
Sbjct: 403 LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEAL 462

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + LK ++ + + P   +YN +I+G   AG ++ A  + +++     +P   T+TI+I G 
Sbjct: 463 KLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGL 522

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +G   EA  +F KM   G  P+  + N +I   L+    + A R++
Sbjct: 523 LKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLI 570



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 151/288 (52%), Gaps = 1/288 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++  LC+ G+    + VF+ M   G  PN+      +       + D A+ +L   
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN L+N   K+   DEA  +  E       PDT T++ L+QGL ++G  
Sbjct: 364 VDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRP 423

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F +M S G  PD++TY+TL+ GLC+   +    +LLK ++ +S+  PD+V Y  
Sbjct: 424 QEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQ-ESKIEPDIVLYNI 482

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G    GK++ A  +++++ + GI+P+  T+ ++I G  K G    A  +  +M   G
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           +LP+  +++ +I G+ +N   +  ++L DEM GK  S +  TF +L++
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 35/179 (19%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RML     P VV F   +    +  Q +  + LC++M    ++ NVY+  ILIN LC+ N
Sbjct: 82  RMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLN 141

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
                                              +V  A  ++ +M +   +PD +TF 
Sbjct: 142 -----------------------------------HVVFAISVLGKMFKLGIQPDAITFN 166

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            LI G C++G + EA+ +FN+M+R G  PD I+ +++I+ L K G  + A +++++  E
Sbjct: 167 TLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEE 225


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 212/417 (50%), Gaps = 7/417 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+  LC+ G ++  + VF  M   G  P+S      +    + G     + + S  
Sbjct: 297 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDM 356

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R  +V      ++S+++   +  N D+A+  F         PD   + ILIQG  R G +
Sbjct: 357 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   GC+ D+VTYNT++ GLC+   +    +L  E+  +  F PD  T T 
Sbjct: 417 SEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLF-PDSYTLTI 475

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CKLG +  A  ++ +M    IK   VT+N L+DGFGKVG++ +A+ +   M+S  
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP  ++FS L++  C  G L++  ++ DEM  K++ P V     +I   C+    +D  
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGE 595

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR--CKPDKVTFTILII 515
            FL+++     VP    YN +I GF K  N+ +A  +V +MEEK+    PD  T+  ++ 
Sbjct: 596 IFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILH 655

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR----IMQRA 568
           G C + +M EA ++  KM+  G  PD  T  SLI+  +      EAFR    ++QR 
Sbjct: 656 GFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRG 712



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 237/536 (44%), Gaps = 72/536 (13%)

Query: 79  PFDEKEVNYRCSNEFWF---------------------VKVVCTLLLRSSYLSD--TCAR 115
           P    EV YRC N+                        +  +  +L+RS  LSD  +C  
Sbjct: 68  PLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVL 127

Query: 116 YLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
            +  + S ++ +E++  L +          +  N   N S   ++L++R+  +       
Sbjct: 128 RMIRR-SGVSRVEIVNSLVS----------TYSNCGSNDS--VFDLLIRTFVQARKLREA 174

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
              F  +RS G+  +       + S +R G  + A  +  +     V ++ +  N ++NA
Sbjct: 175 YEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNA 234

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L K    ++      E       PD  T+N LI   S  G +++AFE  + M S G SP 
Sbjct: 235 LCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPG 294

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG--------- 346
           + TYNT+I+GLC+  +  R  E+  E+  +S  SPD  TY S++   CK G         
Sbjct: 295 VYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLLMEACKKGDAVETENIF 353

Query: 347 --------------------------KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
                                      +DKA   +N +   G+ P  V + +LI G+ + 
Sbjct: 354 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 413

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  +R  ML  G   DVVT+++++ G C+   L +  KL +EM  + L P+ YT 
Sbjct: 414 GMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTL 473

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           TILI+  CK   L +A    K++K   +      YN ++DGF K G++D A  I A+M  
Sbjct: 474 TILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 533

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           K   P  ++F+IL+   C KG + EA  ++++M+     P  +  NS+I    + G
Sbjct: 534 KEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 204/415 (49%), Gaps = 3/415 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +    GL +    +   M S G  P        ++   + GK + AK + ++ 
Sbjct: 262 TYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 321

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++  +  Y SLL    K+ +A E   +F +       PD   F+ ++   +R G +
Sbjct: 322 LRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 381

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA  +F  +   G  PD V Y  LI G CR   ++    L  E+  +   + DVVTY +
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEM-LQQGCAMDVVTYNT 440

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK   + +A  ++NEM   G+ P + T  +LIDG  K+GN+ +A  + ++M    
Sbjct: 441 ILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR 500

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              DVVT+++L+DG+ + G ++   ++  +M  K + P   +F+IL+NALC +  L++A 
Sbjct: 501 IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAF 560

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R   ++    + P   + N +I G+C++GN  +  + + +M  +   PD +++  LI G 
Sbjct: 561 RVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGF 620

Query: 518 CMKGRMVEAISIFNKM--LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +  M +A  +  KM   + G  PD  T NS++    +     EA  ++++  E
Sbjct: 621 VKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIE 675



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 204/436 (46%), Gaps = 3/436 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           + E SR  + +N    T N+++ +LC+ G  + V      ++  G  P+       +S+ 
Sbjct: 213 YQEISRSGVGVN--VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAY 270

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G  + A  L+        +   + YN+++N L K    + A  +F E  R    PD+
Sbjct: 271 SSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 330

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+  L+    + G+  +    F DM S    PD+V +++++S   R   + +       
Sbjct: 331 TTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 390

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           VK ++   PD V YT +I GYC+ G + +A  + NEM   G     VT+N ++ G  K  
Sbjct: 391 VK-EAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 449

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ +   M   G  PD  T + LIDG+C+ G L   ++L  +MK K +  +V T+ 
Sbjct: 450 MLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYN 509

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L++   K   ++ A+     +   +++P P  ++ +++  C  G++ EA  +  EM  K
Sbjct: 510 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISK 569

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             KP  +    +I G+C  G   +      KM+  G  PD I+ N+LI   +K    ++A
Sbjct: 570 SIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKA 629

Query: 562 FRIMQRASEDQNLQLP 577
           F ++++  E Q   +P
Sbjct: 630 FGLVKKMEEKQGGLVP 645



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 165/308 (53%), Gaps = 1/308 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            F++LI+   +  ++++A+E F  + S G +  I   N LI  L R+  V     + +E+
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +S    +V T   +++  CK GKM+K     +E+   G+ P  VT+N LI  +   G 
Sbjct: 217 S-RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  A  +   M S G+ P V T++++I+G C++G+  +  ++  EM    LSP+  T+  
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L+   CK+    +       ++  D+VP    ++ ++  F ++GN+D+A +    ++E  
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD V +TILI G+C KG + EA+++ N+ML+ GCA D +T N+++  L K  M  EA 
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455

Query: 563 RIMQRASE 570
           ++    +E
Sbjct: 456 KLFNEMTE 463


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ + C+ G+ +    +   M  DGH+P+       +    ++G+ + A  L ++ 
Sbjct: 82  TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   +N+++  L +Q+  D+A  +F E       PD+W++ ILI GL++ G++
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKL 201

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++ F  M   G +P  VTYN +I G+C    +    EL K ++ K    P   T+  
Sbjct: 202 NEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG-CRPSRFTFNI 260

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK GKMD+A  +   M   G  P  VT++ LI G   +  +  A ++ E M+   
Sbjct: 261 LIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT ++LI G C+ G++ +  ++ D M     SP+V T+  L++  C+  +   AR
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    L P    Y  ++ G CKA  + EA  + A+M+   C P+  T+T LI+G 
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           C  G++   + +F +M+  G +PD +   +L + L K G    A  I++   E  +L+  
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE--SLRSE 498

Query: 578 SWKKAV 583
           +W   V
Sbjct: 499 AWGDEV 504



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 202/377 (53%), Gaps = 1/377 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+S      +    +AGK + A+ L  +     VT ST  Y SL++ L   N+ D+A  +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F +  R    P   T+N++I    + G +++A +    M   G  PD+VTYNT++ GLC+
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              V     L  E++ +   +P+  ++ ++I G C+  K+D+A  +++EM +  I P + 
Sbjct: 128 SGRVEEALLLFNEME-RLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW 186

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           ++ +LIDG  K G +  A  +  RML  G  P  VT++ +I G C    L++ L+L   M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           + K   P+ +TF ILI+A CK  ++++A R LK++  +  VP    Y+ +I G C    V
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           D+A  ++ +M +++CKP  VT   LI G C  GR+ EA  + + M+  G +PD +T N+L
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 549 ISCLLKGGMPNEAFRIM 565
           +    + G    A  ++
Sbjct: 367 VHGHCRAGQTERARELL 383



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 201/410 (49%), Gaps = 1/410 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   Y  ++  LC     D  + +F  M   G  P+       + +  + G  + A  L+
Sbjct: 44  STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLI 103

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +            YN++++ L K    +EA+ +F E  RL   P+  + N +I GL + 
Sbjct: 104 KKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ 163

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            ++ +A + F++M +    PD  +Y  LI GL +  ++   ++L + +   S  +P  VT
Sbjct: 164 SKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRM-LDSGITPSAVT 222

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  VI G C    +D+A  ++  M S G +PS  TFN+LID   K G M  A  + +RM 
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT 282

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G++PDVVT+S+LI G C   +++    L ++M  +   P V T   LI+ LCK  R+ 
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +AR  L  +  +   P    YN ++ G C+AG  + A  ++++M  +   P+ VT+T L+
Sbjct: 343 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            G C   R+ EA  +F +M   GCAP+  T  +LI      G  +   ++
Sbjct: 403 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 452



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 205/430 (47%), Gaps = 7/430 (1%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           L F E  R+  + N   +++N ++  LC+    D    VF  M +    P+S      + 
Sbjct: 136 LLFNEMERLGCTPNR--RSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILID 193

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
              +AGK + A  L  +     +T S   YN +++ +      DEA+ +FK       +P
Sbjct: 194 GLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP 253

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
             +TFNILI    + G++ +AF     M   G  PD+VTY+TLISGLC +  V     LL
Sbjct: 254 SRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 313

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +++  K +  P VVT  ++I G CK G++ +A  + + M S G  P  VT+N L+ G  +
Sbjct: 314 EDM-VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G    A  +   M++ G  P+VVT+++L+ G C+  +L +   +  +MK    +PN++T
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T LI   C   +++   +   ++    + P   +Y  +    CK+G    A  I+ E  
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR 492

Query: 500 E---KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           E        D+V +   + G    G+M  A+     M+R G  P      SL++ L K G
Sbjct: 493 ESLRSEAWGDEV-YRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551

Query: 557 MPNEAFRIMQ 566
              EA  +++
Sbjct: 552 QGGEARAVLE 561



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 166/308 (53%), Gaps = 1/308 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD+W++ ILI GL++ G++  A + F  +   G +P  V Y +LI GLC  N      EL
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             ++  +    P  VTY  +I   CK G +++A  +  +M   G  P  VT+N ++DG  
Sbjct: 68  FADMNRRG-CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G +  A  +   M   G  P+  + +++I G C+  +++Q  ++  EM+ +++ P+ +
Sbjct: 127 KSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW 186

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           ++ ILI+ L K  +LN+A +  +++  + + P    YN VI G C A  +DEA  +   M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K C+P + TF ILI  HC +G+M EA  +  +M   G  PD +T ++LIS L      
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 559 NEAFRIMQ 566
           ++A  +++
Sbjct: 307 DDARHLLE 314



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 161/282 (57%), Gaps = 1/282 (0%)

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           SPD  +Y  LI GL +  ++    +L +++   S  +P  V YTS+I G C     D A 
Sbjct: 7   SPDSWSYGILIDGLAKAGKLNDARDLFQKL-LHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ +MN  G  PS VT+NV+ID   K G +  A  + ++M+  G++PDVVT+++++DG 
Sbjct: 66  ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C++G++ + L L +EM+    +PN  +   +I  LC++++++ A +   +++  D+ P  
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           + Y  +IDG  KAG ++EA  +   M +    P  VT+ ++I G C+   + EA+ +F  
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           M   GC P   T N LI    K G  +EAFR+++R ++D ++
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 179/367 (48%), Gaps = 8/367 (2%)

Query: 137 KLGLKFLEFSR-VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL   +  F R ++  +  S  TYN+V+  +C     D    +F  MRS G  P+     
Sbjct: 200 KLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFN 259

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + +  + GK D A  LL +            Y++L++ L      D+A ++ ++  + 
Sbjct: 260 ILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +P   T N LI GL + G +K+A E    M S G SPD+VTYNTL+ G CR  +  R 
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            ELL ++  +   +P+VVTYT+++SG CK  ++ +A G++ +M S G  P+  T+  LI 
Sbjct: 380 RELLSDMVARG-LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE----MKGK 431
           GF   G +     +   M+  G  PD V + +L    C++G+  + L++  E    ++ +
Sbjct: 439 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSE 498

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                VY F +  + L    ++  A  F++ +     +P P     ++ G CK+G   EA
Sbjct: 499 AWGDEVYRFAV--DGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556

Query: 492 NVIVAEM 498
             ++ E+
Sbjct: 557 RAVLEEI 563


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 208/399 (52%), Gaps = 3/399 (0%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           HD+ Q+ FD M      PN       + +  + G    A  LL +     ++++ F YN 
Sbjct: 171 HDARQL-FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
            +  L +     EAV +  +  R Y+ PD  T+N LI+GL +    ++A  +   M + G
Sbjct: 230 WIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 288

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C PD  TYNT+I G C+++ V    ELLK+  FK  F PD VTY S+I+G C  G +++A
Sbjct: 289 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG-FVPDQVTYCSLINGLCAEGDVERA 347

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++NE  + GIKP  V +N L+ G    G ++ A  +   M   G  PD+ T++ +I+G
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G ++    + ++   K   P+V+TF  LI+  CK  +L+ A + ++++    + P 
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 467

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN V++G CKAG V+E N    EM  K C P+ +T+ ILI   C   +M EA  +  
Sbjct: 468 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 527

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           KM + G  PD ++ N+LI    + G    A+ + Q+  E
Sbjct: 528 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 566



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLP 189
           KR D  + GL   +  +  +S+N    TYN+ +R LCE G L ++V++V D MR+   +P
Sbjct: 201 KRGDVLEAGLLLGKVIQRGMSIN--LFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYA-VP 256

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +       +    +      A   L +          F YN++++   K +   EA  + 
Sbjct: 257 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 316

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           K+       PD  T+  LI GL   G+V++A E F +  + G  PDIV YN+L+ GLC  
Sbjct: 317 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 376

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             +    +++ E+  +    PD+ TY  VI+G CK+G +  AT + N+    G  P   T
Sbjct: 377 GLILHALQVMNEMA-EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           FN LIDG+ K   + SA  + ERM  +G  PD +T++S+++G C+ G++N+  +   EM 
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K   PN  T+ ILI   C+ N++ +A + + ++    L P    +N +I GFC+ G+++
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A ++  ++EEK       TF  LI     K  M  A  IF++ML  G   D  T   LI
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615

Query: 550 SCLLKGGMPNEAF 562
               K    + A+
Sbjct: 616 DGSCKTANVDRAY 628



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 202/418 (48%), Gaps = 10/418 (2%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC--IRAGKCDAAKGL 213
             T+ + +RS C   L     +    +R+   LP+   + +    C     G    A+ L
Sbjct: 123 LHTHTIRLRSFC---LTARPHIALRLLRA---LPHRGAVAYCTVVCGLYAHGHTHDARQL 176

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             Q     V  +   +N +L+AL K+ +  EA  +  +  +     + +T+NI I+GL  
Sbjct: 177 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 236

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G + +A      M ++   PD+VTYNTLI GLC+ +        L+ +  +    PD  
Sbjct: 237 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDF 294

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++I GYCK+  + +AT +  +    G  P  VT+  LI+G    G++  A  +    
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + G  PD+V ++SL+ G C  G +   L++ +EM  +   P++ T+ I+IN LCK   +
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +DA   +        +P  F +N +IDG+CK   +D A  +V  M E    PD +T+  +
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + G C  G++ E    F +M+  GC P+ IT N LI    +     EA +++ + S++
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 532



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 203/431 (47%), Gaps = 15/431 (3%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           +T  R LC+K  P  ++  ++R+ N                L   F TYN ++   C++ 
Sbjct: 262 NTLIRGLCKKSMPQEAMHYLRRMMNQG-------------CLPDDF-TYNTIIDGYCKIS 307

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           +      +       G +P+       ++     G  + A  L ++ +   +     +YN
Sbjct: 308 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 367

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           SL+  L  Q     A+ +  E       PD  T+NI+I GL ++G +  A     D    
Sbjct: 368 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 427

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  PD+ T+NTLI G C+  ++    +L++ + ++   +PD +TY SV++G CK GK+++
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERM-WEYGIAPDTITYNSVLNGLCKAGKVNE 486

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
               + EM   G  P+ +T+N+LI+ F +   M  A  +  +M   G  PD V+F++LI 
Sbjct: 487 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G+CRNG L     L  +++ K  S    TF  LI A   +  ++ A +   ++       
Sbjct: 547 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 606

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
             + Y  +IDG CK  NVD A + + EM +K   P   TF  +I    +  R+ +A+ I 
Sbjct: 607 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 666

Query: 531 NKMLRIGCAPD 541
           + M++IG  P+
Sbjct: 667 HIMVKIGVVPE 677



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 154/335 (45%), Gaps = 33/335 (9%)

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+  +R G ++ A + F  M  F C P    YN ++  L       + H++   +   + 
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM-LAAG 118

Query: 328 FSPDV-------------------------------VTYTSVISGYCKLGKMDKATGIYN 356
            SPD+                               V Y +V+ G    G    A  +++
Sbjct: 119 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFD 178

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M    + P+   FN ++    K G+++ A  +  +++  G   ++ T++  I G C  G
Sbjct: 179 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 238

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           +L + ++L D M+   + P+V T+  LI  LCK++   +A  +L+++     +P  F YN
Sbjct: 239 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 297

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +IDG+CK   V EA  ++ +   K   PD+VT+  LI G C +G +  A+ +FN+    
Sbjct: 298 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 357

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G  PD +  NSL+  L   G+   A ++M   +E+
Sbjct: 358 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 392



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 7/245 (2%)

Query: 325 KSEFSPDVV--TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           +S  SP  +   Y + I  Y + G++  A   +  M+     P+A  +N ++D       
Sbjct: 44  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAY 103

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
              A  +  RML+ G  PD+ T +  +  +C   + +  L+L   +  +        +  
Sbjct: 104 HDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCT 159

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           ++  L      +DAR+   Q+    + P    +N V+   CK G+V EA +++ ++ ++ 
Sbjct: 160 VVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRG 219

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              +  T+ I I G C  GR+ EA+ + + M R    PD +T N+LI  L K  MP EA 
Sbjct: 220 MSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAM 278

Query: 563 RIMQR 567
             ++R
Sbjct: 279 HYLRR 283


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 208/399 (52%), Gaps = 3/399 (0%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           HD+ Q+ FD M      PN       + +  + G    A  LL +     ++++ F YN 
Sbjct: 169 HDARQL-FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
            +  L +     EAV +  +  R Y+ PD  T+N LI+GL +    ++A  +   M + G
Sbjct: 228 WIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C PD  TYNT+I G C+++ V    ELLK+  FK  F PD VTY S+I+G C  G +++A
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG-FVPDQVTYCSLINGLCAEGDVERA 345

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++NE  + GIKP  V +N L+ G    G ++ A  +   M   G  PD+ T++ +I+G
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G ++    + ++   K   P+V+TF  LI+  CK  +L+ A + ++++    + P 
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN V++G CKAG V+E N    EM  K C P+ +T+ ILI   C   +M EA  +  
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           KM + G  PD ++ N+LI    + G    A+ + Q+  E
Sbjct: 526 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 564



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLP 189
           KR D  + GL   +  +  +S+N    TYN+ +R LCE G L ++V++V D MR+   +P
Sbjct: 199 KRGDVLEAGLLLGKVIQRGMSIN--LFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYA-VP 254

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +       +    +      A   L +          F YN++++   K +   EA  + 
Sbjct: 255 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 314

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           K+       PD  T+  LI GL   G+V++A E F +  + G  PDIV YN+L+ GLC  
Sbjct: 315 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 374

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             +    +++ E+  +    PD+ TY  VI+G CK+G +  AT + N+    G  P   T
Sbjct: 375 GLILHALQVMNEMA-EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           FN LIDG+ K   + SA  + ERM  +G  PD +T++S+++G C+ G++N+  +   EM 
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K   PN  T+ ILI   C+ N++ +A + + ++    L P    +N +I GFC+ G+++
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A ++  ++EEK       TF  LI     K  M  A  IF++ML  G   D  T   LI
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613

Query: 550 SCLLKGGMPNEAF 562
               K    + A+
Sbjct: 614 DGSCKTANVDRAY 626



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 202/418 (48%), Gaps = 10/418 (2%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC--IRAGKCDAAKGL 213
             T+ + +RS C   L     +    +R+   LP+   + +    C     G    A+ L
Sbjct: 121 LHTHTIRLRSFC---LTARPHIALRLLRA---LPHRGAVAYCTVVCGLYAHGHTHDARQL 174

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             Q     V  +   +N +L+AL K+ +  EA  +  +  +     + +T+NI I+GL  
Sbjct: 175 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 234

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G + +A      M ++   PD+VTYNTLI GLC+ +        L+ +  +    PD  
Sbjct: 235 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDF 292

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++I GYCK+  + +AT +  +    G  P  VT+  LI+G    G++  A  +    
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + G  PD+V ++SL+ G C  G +   L++ +EM  +   P++ T+ I+IN LCK   +
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +DA   +        +P  F +N +IDG+CK   +D A  +V  M E    PD +T+  +
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + G C  G++ E    F +M+  GC P+ IT N LI    +     EA +++ + S++
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 530



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 203/431 (47%), Gaps = 15/431 (3%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           +T  R LC+K  P  ++  ++R+ N                L   F TYN ++   C++ 
Sbjct: 260 NTLIRGLCKKSMPQEAMHYLRRMMNQG-------------CLPDDF-TYNTIIDGYCKIS 305

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           +      +       G +P+       ++     G  + A  L ++ +   +     +YN
Sbjct: 306 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 365

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           SL+  L  Q     A+ +  E       PD  T+NI+I GL ++G +  A     D    
Sbjct: 366 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 425

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  PD+ T+NTLI G C+  ++    +L++ + ++   +PD +TY SV++G CK GK+++
Sbjct: 426 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERM-WEYGIAPDTITYNSVLNGLCKAGKVNE 484

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
               + EM   G  P+ +T+N+LI+ F +   M  A  +  +M   G  PD V+F++LI 
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G+CRNG L     L  +++ K  S    TF  LI A   +  ++ A +   ++       
Sbjct: 545 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 604

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
             + Y  +IDG CK  NVD A + + EM +K   P   TF  +I    +  R+ +A+ I 
Sbjct: 605 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 664

Query: 531 NKMLRIGCAPD 541
           + M++IG  P+
Sbjct: 665 HIMVKIGVVPE 675



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 154/335 (45%), Gaps = 33/335 (9%)

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+  +R G ++ A + F  M  F C P    YN ++  L       + H++   +   + 
Sbjct: 58  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM-LAAG 116

Query: 328 FSPDV-------------------------------VTYTSVISGYCKLGKMDKATGIYN 356
            SPD+                               V Y +V+ G    G    A  +++
Sbjct: 117 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFD 176

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M    + P+   FN ++    K G+++ A  +  +++  G   ++ T++  I G C  G
Sbjct: 177 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 236

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           +L + ++L D M+   + P+V T+  LI  LCK++   +A  +L+++     +P  F YN
Sbjct: 237 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 295

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +IDG+CK   V EA  ++ +   K   PD+VT+  LI G C +G +  A+ +FN+    
Sbjct: 296 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 355

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G  PD +  NSL+  L   G+   A ++M   +E+
Sbjct: 356 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 34/277 (12%)

Query: 325 KSEFSPDVVT--YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           +S  SP  +   Y + I  Y + G++  A   +  M+     P+A  +N ++D       
Sbjct: 42  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAY 101

Query: 383 MVSAEYMRERMLSFGYLPDV-------------------------------VTFSSLIDG 411
              A  +  RML+ G  PD+                               V + +++ G
Sbjct: 102 HDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCG 161

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
              +G  +   +L D+M   ++ PN+  F  +++ALCK   + +A   L ++    +   
Sbjct: 162 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 221

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            F YN  I G C+AG + EA  +V  M      PD VT+  LI G C K    EA+    
Sbjct: 222 LFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLR 280

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           +M+  GC PDD T N++I    K  M  EA  +++ A
Sbjct: 281 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDA 317


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 208/399 (52%), Gaps = 3/399 (0%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           HD+ Q+ FD M      PN       + +  + G    A  LL +     ++++ F YN 
Sbjct: 168 HDARQL-FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
            +  L +     EAV +  +  R Y+ PD  T+N LI+GL +    ++A  +   M + G
Sbjct: 227 WIRGLCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C PD  TYNT+I G C+++ V    ELLK+  FK  F PD VTY S+I+G C  G +++A
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG-FVPDQVTYCSLINGLCAEGDVERA 344

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++NE  + GIKP  V +N L+ G    G ++ A  +   M   G  PD+ T++ +I+G
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G ++    + ++   K   P+V+TF  LI+  CK  +L+ A + ++++    + P 
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN V++G CKAG V+E N    EM  K C P+ +T+ ILI   C   +M EA  +  
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 524

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           KM + G  PD ++ N+LI    + G    A+ + Q+  E
Sbjct: 525 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 563



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLP 189
           KR D  + GL   +  +  +S+N    TYN+ +R LCE G L ++V++V D MR+   +P
Sbjct: 198 KRGDVLEAGLLLGKVIQRGMSIN--LFTYNIWIRGLCEAGRLPEAVRLV-DGMRAYA-VP 253

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +       +    +      A   L +          F YN++++   K +   EA  + 
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           K+       PD  T+  LI GL   G+V++A E F +  + G  PDIV YN+L+ GLC  
Sbjct: 314 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 373

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             +    +++ E+  +    PD+ TY  VI+G CK+G +  AT + N+    G  P   T
Sbjct: 374 GLILHALQVMNEMA-EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           FN LIDG+ K   + SA  + ERM  +G  PD +T++S+++G C+ G++N+  +   EM 
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K   PN  T+ ILI   C+ N++ +A + + ++    L P    +N +I GFC+ G+++
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A ++  ++EEK       TF  LI     K  M  A  IF++ML  G   D  T   LI
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612

Query: 550 SCLLKGGMPNEAF 562
               K    + A+
Sbjct: 613 DGSCKTANVDRAY 625



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 202/418 (48%), Gaps = 10/418 (2%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC--IRAGKCDAAKGL 213
             T+ + +RS C   L     +    +R+   LP+   + +    C     G    A+ L
Sbjct: 120 LHTHTIRLRSFC---LTARPHIALRLLRA---LPHRGAVAYCTVVCGLYAHGHTHDARQL 173

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             Q     V  +   +N +L+AL K+ +  EA  +  +  +     + +T+NI I+GL  
Sbjct: 174 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 233

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G + +A      M ++   PD+VTYNTLI GLC+ +        L+ +  +    PD  
Sbjct: 234 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL-PDDF 291

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++I GYCK+  + +AT +  +    G  P  VT+  LI+G    G++  A  +    
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + G  PD+V ++SL+ G C  G +   L++ +EM  +   P++ T+ I+IN LCK   +
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +DA   +        +P  F +N +IDG+CK   +D A  +V  M E    PD +T+  +
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + G C  G++ E    F +M+  GC P+ IT N LI    +     EA +++ + S++
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQE 529



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 203/431 (47%), Gaps = 15/431 (3%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           +T  R LC+K  P  ++  ++R+ N                L   F TYN ++   C++ 
Sbjct: 259 NTLIRGLCKKSMPQEAMHYLRRMMNQG-------------CLPDDF-TYNTIIDGYCKIS 304

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           +      +       G +P+       ++     G  + A  L ++ +   +     +YN
Sbjct: 305 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 364

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           SL+  L  Q     A+ +  E       PD  T+NI+I GL ++G +  A     D    
Sbjct: 365 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 424

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  PD+ T+NTLI G C+  ++    +L++ + ++   +PD +TY SV++G CK GK+++
Sbjct: 425 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERM-WEYGIAPDTITYNSVLNGLCKAGKVNE 483

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
               + EM   G  P+ +T+N+LI+ F +   M  A  +  +M   G  PD V+F++LI 
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G+CRNG L     L  +++ K  S    TF  LI A   +  ++ A +   ++       
Sbjct: 544 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 603

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
             + Y  +IDG CK  NVD A + + EM +K   P   TF  +I    +  R+ +A+ I 
Sbjct: 604 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 663

Query: 531 NKMLRIGCAPD 541
           + M++IG  P+
Sbjct: 664 HIMVKIGVVPE 674



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 154/335 (45%), Gaps = 33/335 (9%)

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+  +R G ++ A + F  M  F C P    YN ++  L       + H++   +   + 
Sbjct: 57  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM-LAAG 115

Query: 328 FSPDV-------------------------------VTYTSVISGYCKLGKMDKATGIYN 356
            SPD+                               V Y +V+ G    G    A  +++
Sbjct: 116 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFD 175

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M    + P+   FN ++    K G+++ A  +  +++  G   ++ T++  I G C  G
Sbjct: 176 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 235

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           +L + ++L D M+   + P+V T+  LI  LCK++   +A  +L+++     +P  F YN
Sbjct: 236 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 294

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +IDG+CK   V EA  ++ +   K   PD+VT+  LI G C +G +  A+ +FN+    
Sbjct: 295 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 354

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G  PD +  NSL+  L   G+   A ++M   +E+
Sbjct: 355 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 34/277 (12%)

Query: 325 KSEFSPDVVT--YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           +S  SP  +   Y + I  Y + G++  A   +  M+     P+A  +N ++D       
Sbjct: 41  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAY 100

Query: 383 MVSAEYMRERMLSFGYLPDV-------------------------------VTFSSLIDG 411
              A  +  RML+ G  PD+                               V + +++ G
Sbjct: 101 HDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCG 160

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
              +G  +   +L D+M   ++ PN+  F  +++ALCK   + +A   L ++    +   
Sbjct: 161 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 220

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            F YN  I G C+AG + EA  +V  M      PD VT+  LI G C K    EA+    
Sbjct: 221 LFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLR 279

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           +M+  GC PDD T N++I    K  M  EA  +++ A
Sbjct: 280 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDA 316


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 221/433 (51%), Gaps = 5/433 (1%)

Query: 139 GLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           G  F   +++  L L     T+  ++R LC  G       +FD M  +G  PN       
Sbjct: 119 GFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTL 178

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           ++   + G  +AA  LL     G       +Y S++++L K     EA  +F +      
Sbjct: 179 INGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGI 238

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            PD +T+  LI  L  + E K        M +    PD+V ++T++  LC+  ++   H+
Sbjct: 239 SPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHD 298

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           ++  +  +    P+VVTY +++ G+C   +MD+A  +++ M   G  P+ +++N LI+G+
Sbjct: 299 VVDMMIIRG-VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 357

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K+  M  A Y+ E M     +P+ VT+++L+ G C  G+L   + L  EM      P++
Sbjct: 358 CKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDL 417

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+ IL++ LCK++ L++A   LK ++ +++ P   +Y  VIDG C+AG ++ A  I + 
Sbjct: 418 ATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 477

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           +  K  +P+  T+TI+I G C +G + EA  +F +M   GC+PD  T N++   LL+   
Sbjct: 478 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN-- 535

Query: 558 PNEAFRIMQRASE 570
             EA R +Q   E
Sbjct: 536 -KEALRAIQLLQE 547



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 176/326 (53%), Gaps = 1/326 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S+  +N   +  +  N  D+A+  F     ++  P T  FN L+  +++  +    F   
Sbjct: 31  SSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 90

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M SFG  PD+ T N LI+  C +N       +L ++  K    PD  T+T++I G C 
Sbjct: 91  NQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKI-LKLGLQPDTATFTTLIRGLCV 149

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK+  A  ++++M   G +P+ VT+  LI+G  KVGN  +A  +   M      PDVV 
Sbjct: 150 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++S+ID  C++ Q+ +   L  +M G+ +SP+++T+T LI++LC           L Q+ 
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            + ++P   +++ V+D  CK G + EA+ +V  M  +  +P+ VT+  L+ GHC++  M 
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329

Query: 525 EAISIFNKMLRIGCAPDDITVNSLIS 550
           EA+ +F+ M+  G AP+ I+ N+LI+
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLIN 355



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 191/398 (47%), Gaps = 1/398 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++ S+ +   + +V  + + M S G  P+   +   ++S     +   A  +L++  
Sbjct: 70  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL 129

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +   T  + +L+  L  +    +A+++F +      QP+  T+  LI GL ++G   
Sbjct: 130 KLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 189

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A      M    C PD+V Y ++I  LC+  +V     L  ++  +   SPD+ TYTS+
Sbjct: 190 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG-ISPDIFTYTSL 248

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I   C L +    T + N+M +  I P  V F+ ++D   K G +  A  + + M+  G 
Sbjct: 249 IHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 308

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+VVT+++L+DG+C   ++++ +K+ D M     +PNV ++  LIN  CK  R++ A  
Sbjct: 309 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 368

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             +++   +L+P    YN ++ G C  G + +A  +  EM      PD  T+ IL+   C
Sbjct: 369 LFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 428

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            K  + EA+++   +      PD      +I  + + G
Sbjct: 429 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 466



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 149/304 (49%), Gaps = 1/304 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           ++ V+ +LC+ G       V D M   G  PN       +       + D A  +     
Sbjct: 280 FSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 339

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   YN+L+N   K    D+A Y+F+E  +    P+T T+N L+ GL  +G ++
Sbjct: 340 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQ 399

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   F++M + G  PD+ TY  L+  LC+ + +     LLK ++  S   PD+  YT V
Sbjct: 400 DAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE-GSNMDPDIQIYTIV 458

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G C+ G+++ A  I++ ++S G++P+  T+ ++I+G  + G +  A  +   M   G 
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T++++  G  +N +  + ++L  EM  +  S +V T T+L+  LC +      ++
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 578

Query: 459 FLKQ 462
            L +
Sbjct: 579 ILSE 582



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 11/269 (4%)

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           + +NTL   L   N +   H             P  V +  +++   K  +      + N
Sbjct: 43  LNFNTLDDALSSFNRMLHMHP-----------PPSTVDFNRLLTSIAKTKQYPTVFSLSN 91

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M+S GI P   T N+LI+ F  +     A  +  ++L  G  PD  TF++LI G C  G
Sbjct: 92  QMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEG 151

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++   L L D+M G+   PNV T+  LIN LCK    N A R L+ ++  +  P   +Y 
Sbjct: 152 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 211

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +ID  CK   V EA  + ++M  +   PD  T+T LI   C         ++ N+M+  
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              PD +  ++++  L K G   EA  ++
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVV 300



 Score = 39.7 bits (91), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 46/117 (39%)

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           N L+DA     ++      P    +N ++    K         +  +M+     PD  T 
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ILI   C   R   A S+  K+L++G  PD  T  +LI  L   G   +A  +  +
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDK 162


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 215/421 (51%), Gaps = 5/421 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  +  TYN V+  LC+ G +   + VF+ M S G  P++      +    R      AK
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + S      V+     ++SL+    +  + D+A+  F++       PD   + ILI G 
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            R G + +A E    M   GC+ D+V YNT+++GLC+   +A  + L  E+  +    PD
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEM-VERGVVPD 429

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
             T+T++I G+CK G M KA  ++  M    IKP  VT+N+LIDGF K   M  A  +  
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+S    P+ ++++ L++GYC  G +++  +L DEM  K + P + T   +I   C+  
Sbjct: 490 EMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSG 549

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L+ A  FL ++    + P    YN +I+GF K   +D+A  ++ +ME K  +PD VT+ 
Sbjct: 550 DLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYN 609

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR----IMQR 567
           +++ G C +GRM EA  I  KM+  G  PD  T  +LI+  +      EAFR    ++QR
Sbjct: 610 VILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQR 669

Query: 568 A 568
            
Sbjct: 670 G 670



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 181/362 (50%), Gaps = 1/362 (0%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           + +  + S ++A K +         R     +S    NSLL  LVK    D A  ++ E 
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            R   + + +T NI++  L +  ++     F  DM   G   DIVTYNTLI+  CR   +
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               E++  +  K    P + TY +VI+G CK G+  +A G++NEM S G+ P   T+N 
Sbjct: 237 GEAFEVMNSMSGKG-LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L+    +  N + A+ +   ML  G  PD+++FSSLI    RNG L+Q L    +MK   
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L P+   +TILIN  C+   +++A     ++           YN +++G CK   + +AN
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  EM E+   PD  TFT LI GHC +G M +A+S+F  M +    PD +T N LI   
Sbjct: 416 ALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGF 475

Query: 553 LK 554
            K
Sbjct: 476 CK 477



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 212/432 (49%), Gaps = 4/432 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E +R  + LN    T N+++ +LC+    D V+     M   G   +       +++  R
Sbjct: 175 EIARSGIELN--VYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCR 232

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G    A  +++      +  + F YN+++N L K+     A  +F E   +   PDT T
Sbjct: 233 EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N L+    R     +A + F DM   G SPD++++++LI    R   + +     +++K
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMK 352

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PD V YT +I+GYC+ G M +A  I ++M   G     V +N +++G  K   +
Sbjct: 353 -TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLL 411

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + + M+  G +PD  TF++LI G+C+ G + + L L   M  KN+ P++ T+ IL
Sbjct: 412 ADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CK   +  A     ++    + P    Y  +++G+C  G V EA  +  EM  K  
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI 531

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           KP  VT   +I G+C  G + +A     KM+  G  PD IT N+LI+  +KG   ++AF 
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFF 591

Query: 564 IMQRASEDQNLQ 575
           ++ +  E + LQ
Sbjct: 592 LINKM-ETKGLQ 602



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 1/402 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S    N ++  L +MG  D    V++ +   G   N   +   V++  +  K D  K  L
Sbjct: 149 SINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFL 208

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  +      YN+L+NA  ++    EA  +         +P  +T+N +I GL + 
Sbjct: 209 IDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKK 268

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G   +A   F +M S G SPD  TYNTL+   CR N      ++  ++  +   SPD+++
Sbjct: 269 GRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRG-VSPDLIS 327

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           ++S+I    + G +D+A   + +M + G+ P  V + +LI+G+ + G M  A  +R++ML
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   DVV ++++++G C+   L     L DEM  + + P+  TFT LI+  CKE  + 
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A      +   ++ P    YN +IDGFCK   +++AN +  EM  ++  P+ +++ IL+
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            G+C  G + EA  ++++M+R G  P  +T N++I    + G
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSG 549



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 3/271 (1%)

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           TLI  + R + V+R   +   +   S    D + +  +I  Y +  K+++ T  +  +  
Sbjct: 84  TLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRR 143

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G   S    N L+ G  K+G +  A  +   +   G   +V T + +++  C++ +++ 
Sbjct: 144 KGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDD 203

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
                 +M+ K +  ++ T+  LINA C+E  L +A   +  +    L P  F YN VI+
Sbjct: 204 VKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVIN 263

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK G    A  +  EM      PD  T+  L++  C     +EA  IF+ ML  G +P
Sbjct: 264 GLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSP 323

Query: 541 DDITVNSLISCLLKGGMPNEA---FRIMQRA 568
           D I+ +SLI    + G  ++A   FR M+ +
Sbjct: 324 DLISFSSLIGVSSRNGHLDQALMYFRDMKTS 354



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 56/131 (42%)

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            F +LI +  +  +LN+     K L+    +      N ++ G  K G VD A  +  E+
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
                + +  T  I++   C   ++ +       M + G   D +T N+LI+   + G+ 
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 559 NEAFRIMQRAS 569
            EAF +M   S
Sbjct: 237 GEAFEVMNSMS 247


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 196/385 (50%), Gaps = 38/385 (9%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V  + F  N  L+ L + N   EA+ +F+        P+ +T+ ILI+G S  G++  A 
Sbjct: 18  VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAI 77

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +   +M S G   + V + TL+ GLC    V    E  + +    + +PDV+TYT+++  
Sbjct: 78  QLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA--KDCAPDVMTYTALVHA 135

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA--------------- 386
            CK GK D+A G+  EM + G  P  VTF+ LIDG  K G+   A               
Sbjct: 136 LCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS 195

Query: 387 ----EYMRERM-----------------LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
               E + +R+                 ++ G+ P V+ F+ +I+G+C+   L+   KL 
Sbjct: 196 DAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 255

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           + M  K   PNV+TFTILI  LCK NR+ +A++ L+++      P    Y+ VI+G CK 
Sbjct: 256 EVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQ 315

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G VD+A  +   ME + C P+ VT  ILI G C   R+ EA  ++++M   GCAPD IT 
Sbjct: 316 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 375

Query: 546 NSLISCLLKGGMPNEAFRIMQRASE 570
           NSLI  L K    +EAF++ Q   E
Sbjct: 376 NSLIDGLCKSFQVDEAFQLFQTIPE 400



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 215/456 (47%), Gaps = 45/456 (9%)

Query: 133 LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           +D P+L L F +++R  +   H+  + N  +  LC +        +F    +   +PN  
Sbjct: 1   MDKPELVLLFFDWARSRV--GHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKF 58

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +     AG  D A  LL + +      +  ++ +L+  L       EA+    E+
Sbjct: 59  TYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEAL----EH 114

Query: 253 FRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           FR  ++   PD  T+  L+  L + G+  +A     +M + GC+PD VT++TLI GLC+ 
Sbjct: 115 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKF 174

Query: 310 NEVARGHELLKEV---------------------KFKS--------------EFSPDVVT 334
               +   +L++V                     K+ S               F+P V+ 
Sbjct: 175 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 234

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +  VI+G+CK   +D A  +   M   G  P+  TF +LI G  K   +  A+ + E+M+
Sbjct: 235 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+VVT+S++I+G C+ GQ++   +L   M+ +N  PNV T  ILI+ LCK  R+ 
Sbjct: 295 MGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 354

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK-PDKVTFTIL 513
           +AR+   +++     P    YN +IDG CK+  VDEA  +   + E      + VT++ L
Sbjct: 355 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 414

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             G+   GRM +A  IF+ ++  G +PD  T  SLI
Sbjct: 415 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 204/418 (48%), Gaps = 9/418 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +NLV+   C+    DS   + + M   G +PN       ++   +A +   A+ LL +  
Sbjct: 235 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
            G  + +   Y++++N L KQ   D+A  +F+   R    P+  T NILI GL +   ++
Sbjct: 295 MGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 354

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A + ++ M   GC+PDI+TYN+LI GLC+  +V    +L + +      + + VTY+++
Sbjct: 355 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 414

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
             GY  LG+M  A  I++ +   G  P   T+  LI  + K    V    + E M S G+
Sbjct: 415 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 474

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P V T S+++ G        + ++L D M  +  + +   + +++  + + ++ + A  
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534

Query: 459 FLKQL------KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            L+Q+      K+N   P     + +++  C+ G  D+A  ++ +M E+       ++  
Sbjct: 535 VLEQVIDKRDRKFN---PSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNR 591

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           L+ G     R  EA  +F  M+  G AP+  TVN +IS L      ++A+ ++QR S+
Sbjct: 592 LLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 649



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 168/395 (42%), Gaps = 40/395 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC+ G  D    +F  M      PN       +    +A + + A+ L  + 
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL-YSQPDTWTFNILIQGLSRIGE 276
           R          YNSL++ L K    DEA  +F+       S  +  T++ L  G + +G 
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A   F  +   G SPD+ TY +LI   C+ +      EL++E+  K  F P V T +
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG-FPPRVNTLS 482

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK----------------- 379
           +V+ G  +    ++A  +++ M + G    A+ +N++++G  +                 
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542

Query: 380 ---------------------VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                                VG    A+ +  +M   G+   V +++ L+ G  R  + 
Sbjct: 543 RDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRW 602

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++  ++ + M     +P + T  ++I+ LC   +++DA   ++++      P     N +
Sbjct: 603 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTL 662

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           I G+CK+G  D A  ++ EM E   +P+  T  +L
Sbjct: 663 IGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 39/264 (14%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEM----------------------------------GLHD 173
           V+   +    TY  ++   C+                                   G H 
Sbjct: 435 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 494

Query: 174 SVQV-VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF---RPGEVTMSTFMY 229
              + +FD M + G   ++ +    V    RA K D A  +L Q    R  +   S+   
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           ++L+ +L +    D+A  +  +           ++N L+ GLSR+    +A + F  M S
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G +P+I T N +IS LC   +V   +EL++ +  K    PD+ T  ++I GYCK G+ D
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS-KLGCCPDIETCNTLIGGYCKSGRAD 673

Query: 350 KATGIYNEMNSCGIKPSAVTFNVL 373
            A  +  EM   G++P+  T ++L
Sbjct: 674 LARKLLEEMTEAGLEPNDTTHDLL 697


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 242/466 (51%), Gaps = 29/466 (6%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD-------------- 180
           +P+L L++  +S+    L+HS +    ++ SL     +  ++   D              
Sbjct: 11  DPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAI 70

Query: 181 ----YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE--VTMSTFMYNSLLN 234
                M  D    NS + +  V + +R  K    +G  +  R G+    +S    N LL+
Sbjct: 71  FHAISMSGDSFCVNSILADMLVLAFVRNLKI--LRGFEAFKRAGDYGFKLSLISCNPLLS 128

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            LVK++   +  ++++E  +   + +  +FNI++ GL ++G++ +A +   DM  +G SP
Sbjct: 129 GLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSP 188

Query: 295 DIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           +++TYNTLI G C   R+ ++ +   +LKE+  K    P+ VTY  +I G+CK   +  A
Sbjct: 189 NVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG-ICPNEVTYNILIDGFCKDENVSGA 247

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++ EM   G++P+ VT+N+LI+G    G +  A  +R++M+S    P+VVT + LI+G
Sbjct: 248 MRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           +C+N  +N+ + L ++M+ + + PN  T+T LI+A CK+ R+ DA      +    + P+
Sbjct: 308 FCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPE 367

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I G C+ G+V  A  ++ EM  K+   D VT+ ILI   C KG   +A+ + +
Sbjct: 368 VSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLD 427

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---MQRASEDQNL 574
           +M   G  P  +T N+L+    + G    A  +   M+R  +  N+
Sbjct: 428 EMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANV 473



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 213/427 (49%), Gaps = 5/427 (1%)

Query: 122 SPLNSLEVIKRLDNPKLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           S L  + V+  + N K+   F  F R  +     S  + N ++  L +   +  ++ V+ 
Sbjct: 85  SILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYR 144

Query: 181 YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
            M       N       V+   + GK + A  ++   +   V+ +   YN+L++   K  
Sbjct: 145 EMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMG 204

Query: 241 NADE---AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
              +   A  + KE       P+  T+NILI G  +   V  A   F +M   G  P++V
Sbjct: 205 RIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVV 264

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYN LI+GLC   +V     L ++    S+  P+VVT+  +I+G+CK   +++A  ++N+
Sbjct: 265 TYNILINGLCSDGKVDEAVAL-RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFND 323

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G+ P+A+T+  LID + K G M  A  +   M+  G  P+V T++ LI G CR G 
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGD 383

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +     L +EM  K LS +V T+ ILI++LCK+     A + L ++    L P    YN 
Sbjct: 384 VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNT 443

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG+C+ GN+  A ++   ME K  + + VT  +LI G C+KGR+ +A  + N+ML  G
Sbjct: 444 LMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERG 503

Query: 538 CAPDDIT 544
             P+  T
Sbjct: 504 LVPNRTT 510



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 174/398 (43%), Gaps = 41/398 (10%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           ++K  +N  +   + E  +  + LN    ++N+V+  LC++G  +    V + M+  G  
Sbjct: 130 LVKESENGDMEFVYREMIKRKIELN--VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVS 187

Query: 189 PNSPMIEFFVSSCI---RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           PN       +       R GK   A  +L +     +  +   YN L++   K  N   A
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGA 247

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           + +F E  R   +P+  T+NILI GL   G+V +A      M S    P++VT+N LI+G
Sbjct: 248 MRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
            C+   V     L  +++ K    P+ +TYT++I  YCK G+M+ A  +YN M   GI P
Sbjct: 308 FCKNKTVNEAINLFNDME-KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP 366

Query: 366 SA-----------------------------------VTFNVLIDGFGKVGNMVSAEYMR 390
                                                VT+N+LID   K G    A  + 
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + M   G  P  VT+++L+DGYCR G L   L +   M+ K    NV T  +LI   C +
Sbjct: 427 DEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLK 486

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
            RL DA   L ++    LVP    Y  + +   + G V
Sbjct: 487 GRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N  L     T+N V++ LC+    D  + VF  M      P+       +    R G
Sbjct: 217 SMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVG 276

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + + A     + +   VT     ++ L+     +   D A    +E   L   PD   + 
Sbjct: 277 EVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYT 336

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ++I G  R G + +A     +M   GC PD+VTYNTL++GLC+ + +    ELL E+K +
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              +PD+ T+T++I GYC+ G  +KA  +++ +    ++P  V +N LIDG  + G++  
Sbjct: 397 G-VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + + M +    P+ VT+S LID +C  GQ+ +     DEM  K   PN+ T+  +I 
Sbjct: 456 ANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C+   +   ++FL+++  ++++P    +N +I G+ K  N+  A  +   ME++  +P
Sbjct: 516 GYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQP 575

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           D VT+ ++I G   +G M EA  +F KM   G  PD  T  SLI+  +  G   EAF++
Sbjct: 576 DAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQL 634



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 206/412 (50%), Gaps = 11/412 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T N+++ S C+    D    V   M      P+       + +  RAG  DAA  L+   
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
                +PG VT     +NS+L  L K    D+A  +F+   +    PD  +FNILI G  
Sbjct: 219 ANKGLKPGIVT-----FNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R+GEV++A +F+ +M   G +PD+V+++ LI       ++      L+E+K      PD 
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG-LVPDG 332

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           V YT VI G+C+ G M +A  + +EM   G  P  VT+N L++G  K   ++ AE +   
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PD+ TF++LI GYCR+G   + L+L D +  + L P+V  +  LI+ +C++  
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L  A      +   ++ P    Y+ +ID  C+ G V+EA   + EM  K   P+ +T+  
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +I G+C  G + +      KM++    PD IT N+LI   +K    + AF +
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNV 564



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 204/385 (52%), Gaps = 1/385 (0%)

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N+  +   V S  ++ + D A  ++S+     V      +N L++A  +  + D A+ + 
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
                   +P   TFN +++GL +     KA E F  M     +PD+ ++N LI G CRV
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            EV    +  KE++ +   +PDVV+++ +I  +   GKMD A     EM   G+ P  V 
Sbjct: 276 GEVEEAMKFYKEMQQRG-VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           + ++I GF + G+M  A  +R+ M+  G LPDVVT+++L++G C+  +L    +L +EMK
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMK 394

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            + ++P++ TFT LI+  C++     A +    L    L P    YN +IDG C+ G++ 
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLA 454

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +AN +  +M  +   P+ VT++ILI  HC KG++ EA    ++M+  G  P+ +T NS+I
Sbjct: 455 KANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNL 574
               + G   +  + +Q+  +D  L
Sbjct: 515 KGYCRSGNVKKGQQFLQKMMQDNIL 539


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 223/436 (51%), Gaps = 7/436 (1%)

Query: 137 KLGLKFLEFSRVNLSLNH--SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           +LG  F   +++ L L H  +  T+N ++R LC  G    V  +FD M  +G  PN    
Sbjct: 118 RLGFAFSVLAKI-LKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTY 176

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G   AA  LL     G       +Y S++++L K     +A  +F E   
Sbjct: 177 GTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH 236

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               P  +T+N LI  L  + E K       +M +    P++V ++T++  LC+  +V  
Sbjct: 237 QGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVME 296

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            H+++ ++  K    P+VVTY +++ G+C   +MD+A  +++ M   G  P  V+++ LI
Sbjct: 297 AHDVV-DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+ K+  +  A Y+ E M     +P+ VT+S+L+ G C  G+L   + L  EM  +   
Sbjct: 356 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+  ++ IL++ LCK  RL++A   LK ++ +++ P   +Y  VIDG C+AG ++ A  +
Sbjct: 416 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + +  K   P+  T+TI+I G C +G + EA  +F +M R G +P+  T N +    L+
Sbjct: 476 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 535

Query: 555 GGMPNEAFRIMQRASE 570
               NE  R +Q   E
Sbjct: 536 N---NETLRGIQLLQE 548



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 196/391 (50%), Gaps = 5/391 (1%)

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLS---QFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           H+   P I  F    I   K      +LS   Q     +  + +  N L+N+        
Sbjct: 61  HMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLG 120

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A  +  +  +L  QP+  TFN LI+GL   G++ +    F  M   G  P++VTY TLI
Sbjct: 121 FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLI 180

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           +GLC+V   +    LL+ ++ +    PDVV YTS+I   CK  ++ +A  +++EM   GI
Sbjct: 181 NGLCKVGSTSAAIRLLRSME-QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGI 239

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            PS  T+N LI     +        +   M++   +P+VV FS+++D  C+ G++ +   
Sbjct: 240 SPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD 299

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           + D M  + + PNV T+  L++  C  + +++A +    +      P    Y+ +I+G+C
Sbjct: 300 VVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYC 359

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K   +++A  +  EM  K   P+ VT++ L+ G C  GR+ +AI++F++M+  G  PD +
Sbjct: 360 KIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 419

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           +   L+  L K    +EA  ++ +A E  N+
Sbjct: 420 SYCILLDYLCKNRRLDEAIALL-KAIEGSNM 449



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 172/322 (53%), Gaps = 1/322 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+  +  +  N  D+A+  F     ++  P    F  L+  ++++          + M 
Sbjct: 36  HNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMD 95

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           SFG  P+I T N LI+  C +  +     +L ++  K    P++ T+ ++I G C  GK+
Sbjct: 96  SFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKI-LKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +   ++++M   G +P+ VT+  LI+G  KVG+  +A  +   M      PDVV ++S+
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID  C++ Q+ Q   L  EM  + +SP+++T+  LI+ALC           L ++  + +
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P   +++ V+D  CK G V EA+ +V  M ++  +P+ VT+  L+ GHC++  M EA+ 
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334

Query: 529 IFNKMLRIGCAPDDITVNSLIS 550
           +F+ M+  G APD ++ ++LI+
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLIN 356



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 156/309 (50%), Gaps = 11/309 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGKCDAAKGLLSQ- 216
           ++ V+ +LC+ G       V D M   G  PN       +   C+R+   +A K   +  
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMV 340

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
              F P  V+     Y++L+N   K    ++A+Y+F+E  R    P+T T++ L+ GL  
Sbjct: 341 CKGFAPDVVS-----YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G ++ A   F++M + G  PD V+Y  L+  LC+   +     LLK ++  S   PD+ 
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE-GSNMDPDIQ 454

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            YT VI G C+ G+++ A  +++ ++S G+ P+  T+ ++I+G  + G +  A  +   M
Sbjct: 455 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 514

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              GY P+  T++ +  G+ RN +  +G++L  EM  +  S +V T T+L+  L  +   
Sbjct: 515 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLD 574

Query: 454 NDARRFLKQ 462
              ++ L +
Sbjct: 575 QSVKQILSE 583



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 126/269 (46%), Gaps = 11/269 (4%)

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           + +NTL   L   N +   H             P +  +T ++    K+        + +
Sbjct: 44  LNFNTLDDALSSFNRMLHMHP-----------PPSIADFTKLLISITKMKHYSTVLSLSH 92

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M+S GI P+  T N+LI+ F  +  +  A  +  ++L  G+ P++ TF++LI G C  G
Sbjct: 93  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++ + L L D+M G+   PNV T+  LIN LCK    + A R L+ ++  +  P   +Y 
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 212

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +ID  CK   V +A  + +EM  +   P   T+  LI   C         ++ N+M+  
Sbjct: 213 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 272

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              P+ +  ++++  L K G   EA  ++
Sbjct: 273 KIMPNVVIFSTVVDALCKEGKVMEAHDVV 301



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 1/158 (0%)

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L+  L   + M   +  P++  FT L+ ++ K    +       Q+    + P  +  N 
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+ FC    +  A  ++A++ +   +P+  TF  LI G C++G++ E + +F+KM+  G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
             P+ +T  +LI+ L K G  + A R++ R+ E  N Q
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLL-RSMEQGNCQ 205


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 223/436 (51%), Gaps = 7/436 (1%)

Query: 137 KLGLKFLEFSRVNLSLNH--SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           +LG  F   +++ L L H  +  T+N ++R LC  G    V  +FD M  +G  PN    
Sbjct: 109 RLGFAFSVLAKI-LKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTY 167

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G   AA  LL     G       +Y S++++L K     +A  +F E   
Sbjct: 168 GTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH 227

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               P  +T+N LI  L  + E K       +M +    P++V ++T++  LC+  +V  
Sbjct: 228 QGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVME 287

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            H+++ ++  K    P+VVTY +++ G+C   +MD+A  +++ M   G  P  V+++ LI
Sbjct: 288 AHDVV-DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+ K+  +  A Y+ E M     +P+ VT+S+L+ G C  G+L   + L  EM  +   
Sbjct: 347 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+  ++ IL++ LCK  RL++A   LK ++ +++ P   +Y  VIDG C+AG ++ A  +
Sbjct: 407 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + +  K   P+  T+TI+I G C +G + EA  +F +M R G +P+  T N +    L+
Sbjct: 467 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 526

Query: 555 GGMPNEAFRIMQRASE 570
               NE  R +Q   E
Sbjct: 527 N---NETLRGIQLLQE 539



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 196/391 (50%), Gaps = 5/391 (1%)

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLS---QFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           H+   P I  F    I   K      +LS   Q     +  + +  N L+N+        
Sbjct: 52  HMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLG 111

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A  +  +  +L  QP+  TFN LI+GL   G++ +    F  M   G  P++VTY TLI
Sbjct: 112 FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLI 171

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           +GLC+V   +    LL+ ++ +    PDVV YTS+I   CK  ++ +A  +++EM   GI
Sbjct: 172 NGLCKVGSTSAAIRLLRSME-QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGI 230

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            PS  T+N LI     +        +   M++   +P+VV FS+++D  C+ G++ +   
Sbjct: 231 SPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD 290

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           + D M  + + PNV T+  L++  C  + +++A +    +      P    Y+ +I+G+C
Sbjct: 291 VVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYC 350

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K   +++A  +  EM  K   P+ VT++ L+ G C  GR+ +AI++F++M+  G  PD +
Sbjct: 351 KIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 410

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           +   L+  L K    +EA  ++ +A E  N+
Sbjct: 411 SYCILLDYLCKNRRLDEAIALL-KAIEGSNM 440



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 172/322 (53%), Gaps = 1/322 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+  +  +  N  D+A+  F     ++  P    F  L+  ++++          + M 
Sbjct: 27  HNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMD 86

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           SFG  P+I T N LI+  C +  +     +L ++  K    P++ T+ ++I G C  GK+
Sbjct: 87  SFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKI-LKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +   ++++M   G +P+ VT+  LI+G  KVG+  +A  +   M      PDVV ++S+
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID  C++ Q+ Q   L  EM  + +SP+++T+  LI+ALC           L ++  + +
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P   +++ V+D  CK G V EA+ +V  M ++  +P+ VT+  L+ GHC++  M EA+ 
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325

Query: 529 IFNKMLRIGCAPDDITVNSLIS 550
           +F+ M+  G APD ++ ++LI+
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLIN 347



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 156/309 (50%), Gaps = 11/309 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGKCDAAKGLLSQ- 216
           ++ V+ +LC+ G       V D M   G  PN       +   C+R+   +A K   +  
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMV 331

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
              F P  V+     Y++L+N   K    ++A+Y+F+E  R    P+T T++ L+ GL  
Sbjct: 332 CKGFAPDVVS-----YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 386

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G ++ A   F++M + G  PD V+Y  L+  LC+   +     LLK ++  S   PD+ 
Sbjct: 387 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE-GSNMDPDIQ 445

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            YT VI G C+ G+++ A  +++ ++S G+ P+  T+ ++I+G  + G +  A  +   M
Sbjct: 446 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 505

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              GY P+  T++ +  G+ RN +  +G++L  EM  +  S +V T T+L+  L  +   
Sbjct: 506 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLD 565

Query: 454 NDARRFLKQ 462
              ++ L +
Sbjct: 566 QSVKQILSE 574



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 126/269 (46%), Gaps = 11/269 (4%)

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           + +NTL   L   N +   H             P +  +T ++    K+        + +
Sbjct: 35  LNFNTLDDALSSFNRMLHMHP-----------PPSIADFTKLLISITKMKHYSTVLSLSH 83

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M+S GI P+  T N+LI+ F  +  +  A  +  ++L  G+ P++ TF++LI G C  G
Sbjct: 84  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++ + L L D+M G+   PNV T+  LIN LCK    + A R L+ ++  +  P   +Y 
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 203

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +ID  CK   V +A  + +EM  +   P   T+  LI   C         ++ N+M+  
Sbjct: 204 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 263

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              P+ +  ++++  L K G   EA  ++
Sbjct: 264 KIMPNVVIFSTVVDALCKEGKVMEAHDVV 292



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 1/158 (0%)

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L+  L   + M   +  P++  FT L+ ++ K    +       Q+    + P  +  N 
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+ FC    +  A  ++A++ +   +P+  TF  LI G C++G++ E + +F+KM+  G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
             P+ +T  +LI+ L K G  + A R++ R+ E  N Q
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLL-RSMEQGNCQ 196


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 215/451 (47%), Gaps = 35/451 (7%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            L     TY  ++  LC +   +    + D M   G++P+   +   +   I+ G  + A
Sbjct: 290 GLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGA 349

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             LL++     V  + F+YNS++N+L K    +EA  +F         P+  T+ ILI G
Sbjct: 350 FELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDG 409

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             R  ++  AF +F  M   G S  + +YN++I+  C+  ++     L KE+  K    P
Sbjct: 410 FGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKG-LKP 468

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            V TYTS+ISGYCK G + KA  +Y+EM   GI P+ VTF  LI G  ++  M  A  + 
Sbjct: 469 TVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLF 528

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + M+    LP+ VT++ LI+G+CR G   +  +L DEM  K LSP+ YT+  LI  LC  
Sbjct: 529 DEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCST 588

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV----------------- 493
            R+++A+ F+  L           Y  ++ GFCK G + EA V                 
Sbjct: 589 GRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSY 648

Query: 494 -----------------IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
                            ++ EM  K  +PD V +TILI G    G + +A   +  M+  
Sbjct: 649 AVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE 708

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           G  P+ +T  +L++ L K G  NEA  + +R
Sbjct: 709 GYVPNSVTYTALVNGLFKAGYVNEAKLLFKR 739



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 204/419 (48%), Gaps = 1/419 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +      Y +V++ LCE+   +  + + +    +G   +      F++   ++ + 
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  +        +      Y +L+  L +    +  + M  E   L   P     + L
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+GL ++G ++ AFE    +G  G  P++  YN++I+ LC+  ++    ELL  V  +  
Sbjct: 337 IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEA-ELLFSVMAERG 395

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +P+ VTYT +I G+ +  K+D A   +N+M  CGI  +  ++N +I+   K G M  AE
Sbjct: 396 LNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAE 455

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M+  G  P V T++SLI GYC++G + +  KL  EM GK ++PN  TFT LI  L
Sbjct: 456 LLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGL 515

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+ N++ +A +   ++    ++P    YN +I+G C+ GN   A  ++ EM +K   PD 
Sbjct: 516 CQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDT 575

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            T+  LI G C  GR+ EA    N +       D++   +L+    K G   EA    Q
Sbjct: 576 YTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQ 634



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 208/432 (48%), Gaps = 4/432 (0%)

Query: 136 PKLGLKFLEFSR-VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
            KL + F  F++ +   ++ +  +YN ++   C+ G     +++F  M   G  P     
Sbjct: 414 AKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATY 473

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              +S   + G    A  L  +     +  +T  + +L+  L + N   EA  +F E   
Sbjct: 474 TSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVE 533

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           L   P+  T+N+LI+G  R G   +AFE   +M   G SPD  TY  LI+GLC    V+ 
Sbjct: 534 LKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSE 593

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             E + ++  K +   D + YT+++ G+CK G++ +A     EM   G++   V++ VLI
Sbjct: 594 AKEFINDLHHKHQ-RLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI 652

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G     + +  E +RE M   G  PD V ++ LIDG+ ++G L +  +    M G+   
Sbjct: 653 SGALNQNDRILFELLRE-MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYV 711

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PN  T+T L+N L K   +N+A+   K++   + +P    Y   +D   K GN++ A  +
Sbjct: 712 PNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQL 771

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              M +     + VT+ ILI G+C  G+  EA  + + M+ IG  PD IT ++ I    K
Sbjct: 772 HNAMLQGSF-ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCK 830

Query: 555 GGMPNEAFRIMQ 566
            G  + A  + +
Sbjct: 831 RGNVDAAMDMWE 842



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 195/419 (46%), Gaps = 9/419 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQ--------VVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           S+K Y     S  +M +   VQ        +V + MR  G LP    +   +++  R  K
Sbjct: 146 SYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRK 205

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
                 L        V    ++Y  ++  L +  + ++A  +  +           T+N+
Sbjct: 206 FRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNV 265

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
            I GL +   V +A E    +G  G   D+VTY TL+ GLCR+ E   G E++ E+  + 
Sbjct: 266 FINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEM-IEL 324

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            + P     + +I G  K+G ++ A  + N++   G+ P+   +N +I+   K G +  A
Sbjct: 325 GYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEA 384

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           E +   M   G  P+ VT++ LIDG+ R  +L+      ++M    +S  VY++  +IN 
Sbjct: 385 ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINC 444

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK  ++  A    K++    L P    Y  +I G+CK G V +A  +  EM  K   P+
Sbjct: 445 QCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPN 504

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            VTFT LI G C   +M EA  +F++M+ +   P+++T N LI    + G    AF ++
Sbjct: 505 TVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELL 563



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 162/392 (41%), Gaps = 38/392 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C  G       + D M   G  P++      ++     G+   AK  ++  
Sbjct: 542 TYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDL 601

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +    Y +LL    K+    EA+   +E      Q D  ++ +LI G     + 
Sbjct: 602 HHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND- 660

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +  FE   +M   G  PD V Y  LI G  +   + +  E    +     + P+ VTYT+
Sbjct: 661 RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWY-IMIGEGYVPNSVTYTA 719

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G  K G +++A  ++  M      P+ +T+   +D   K GNM +A  +   ML  G
Sbjct: 720 LVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-G 778

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + VT++ LI GYC+ G+  +  KL D M G  + P+  T++  I   CK        
Sbjct: 779 SFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKR------- 831

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                                       GNVD A  +   M ++  KPD+V F  LI   
Sbjct: 832 ----------------------------GNVDAAMDMWECMLQRGLKPDRVVFNFLIHAC 863

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C+ G +  A+ + N M+  G  P   T +SL+
Sbjct: 864 CLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 101/205 (49%)

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           S+  F++LI  + +   ++    +   M  +G LP+V T S+L++   R  +  Q L+L 
Sbjct: 154 SSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF 213

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D +    + P+ Y +T+++  LC+    N A+  + Q + N        YN  I+G CK+
Sbjct: 214 DTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKS 273

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
             V EA  +   + EK  K D VT+  L++G C        + + ++M+ +G  P +  V
Sbjct: 274 KRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAV 333

Query: 546 NSLISCLLKGGMPNEAFRIMQRASE 570
           + LI  L+K G    AF ++ +  +
Sbjct: 334 SGLIEGLIKMGSIEGAFELLNKVGK 358


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 237/482 (49%), Gaps = 10/482 (2%)

Query: 91  NEFWFVKVVC-TLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVN 149
           ++F+ ++  C TL + + +     A+ L E ++        K LD+    L F       
Sbjct: 75  HQFFTLRCKCITLHILTRFKLYKTAQTLAEDVAA-------KTLDDEDASLVFRSLQETY 127

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CD 208
              N +   ++LV++S   + L D    +    ++ G +P        + + IR+ +   
Sbjct: 128 DLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNIS 187

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A+ +  +    +V+ + F YN L+       N D A+  F    +    P+  T+N LI
Sbjct: 188 FAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLI 247

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  ++ ++   FE    M   G  P++++YN +I+GLCR   +     +L E+  K  +
Sbjct: 248 DGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN-KRGY 306

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           S D VTY ++I GYCK G   +A  ++ EM   G+ PS +T+  LI    K GNM  A  
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE 366

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
             ++M   G  P+  T+++L+DG+ + G +N+  ++  EM     SP+V T+  LIN  C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              ++ DA   L+ +K   L P    Y+ V+ GFC++ +VDEA  +  +M  K  KPD +
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T++ LI G C + R  EA  +F++MLR+G  PD+ T  +LI+     G   +A ++    
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546

Query: 569 SE 570
            E
Sbjct: 547 VE 548



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 215/418 (51%), Gaps = 16/418 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  LC  G    +  V   M   G+  +       +    + G    A  + ++ 
Sbjct: 277 SYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ S   Y SL++++ K  N + A     +       P+  T+  L+ G S+ G +
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+    +M   G SP +VTYN LI+G C   ++     +L+++K K   +PDVV+Y++
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG-LTPDVVSYST 455

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+SG+C+   +D+A  +  +M + GIKP  +T++ LI GF +      A  + + ML  G
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T+++LI+ YC  G L + ++L +EM  K + P+V T+++LIN L K+ R  +A+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAK 575

Query: 458 RFLKQLKWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVAEMEEKR 502
           R L +L + + VP    Y+ +I+               GFC  G + EA+ +   M EK 
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKN 635

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
            KPD   + ++I GHC  G + +A S++ +M++ G     +TV +L+  L K G  NE
Sbjct: 636 HKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 207/428 (48%), Gaps = 16/428 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R  C  G  D     FD M   G LPN       +    +  K D    LL   
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM 266

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN ++N L ++    E  ++  E  +     D  T+N LI+G  + G  
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNF 326

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   G SP ++TY +LI  +C+   + R  E L +++ +    P+  TYT+
Sbjct: 327 HQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG-LCPNERTYTT 385

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+ + G M++A  +  EM   G  PS VT+N LI+G    G MV A  + E M   G
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV++S+++ G+CR+  +++ L++  +M  K + P+  T++ LI   C++ R  +A 
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC 505

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    L P  F Y  +I+ +C  G++ +A  +  EM EK   PD VT+++LI G 
Sbjct: 506 DLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGL 565

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS-----------CLLKG----GMPNEAF 562
             + R  EA  +  K+      P D+T ++LI             L+KG    GM  EA 
Sbjct: 566 NKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625

Query: 563 RIMQRASE 570
           ++ +   E
Sbjct: 626 QVFESMLE 633



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 153/353 (43%), Gaps = 23/353 (6%)

Query: 155 SFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           S  TYN ++   C  G + D++ V+ D M+  G  P+       +S   R+   D A  +
Sbjct: 414 SVVTYNALINGHCIAGKMVDAIAVLED-MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRV 472

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +     +   T  Y+SL+    +Q    EA  +F E  R+   PD +T+  LI     
Sbjct: 473 KRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCM 532

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G+++KA +   +M   G  PD+VTY+ LI+GL +         LL ++ F  E  P  V
Sbjct: 533 EGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKL-FYEESVPSDV 591

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++I                   N   I+  +V    LI GF   G M  A+ + E M
Sbjct: 592 TYHTLIE------------------NCSNIEFKSVV--SLIKGFCMKGMMTEADQVFESM 631

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           L   + PD   ++ +I G+CR G + +   L  EM       +  T   L+  L KE ++
Sbjct: 632 LEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKV 691

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           N+    +  +  +  + +      +++   + GN+D    ++AEM +    P+
Sbjct: 692 NELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 217/445 (48%), Gaps = 16/445 (3%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY--NLVMRSLCEMGLHDSVQVVFDYMRS 184
           L V+ R   P L     E  R+ LS +     Y  N+++ S C+    D    V   M  
Sbjct: 129 LAVLSRAGWPHLAQ---EAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQ 239
               P+       + +  RAG  DAA  L+        +PG VT     YNS+L  L K 
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVT-----YNSVLKGLCKH 240

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
              D+A  +F+   +    PD  +FNILI G  R+GEVK+A +F+ +M     +PD+V++
Sbjct: 241 RRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSF 300

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + LI    R  E+      L+E+K      PD V YT VI G+C+ G M +A  + +EM 
Sbjct: 301 SCLIGLFSRRGEMDHAGAYLREMKGLG-LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV 359

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  P  VT+N L++G  K   ++ AE +   M   G  PD+ TF++LI GYCR G   
Sbjct: 360 GFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFE 419

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             L+L D +  + L P+V T+  LI+ +C++  L  A      +   +++P    Y+ +I
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  C+ G V++A   + EM +K   P+  T+  +I G+C  G + +      KM +    
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539

Query: 540 PDDITVNSLISCLLKGGMPNEAFRI 564
           PD IT N+LI   +K    + AF +
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNV 564



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 219/431 (50%), Gaps = 5/431 (1%)

Query: 145 FSRVNLSLNHSF----KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           F    L L+H         N ++  L   G     Q  +  + S     N+  +   V S
Sbjct: 107 FEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHS 166

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             +  + D A  ++S+     V      +N L++A  +  + D A+ +         +P 
Sbjct: 167 YCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPG 226

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+N +++GL +     KA E F  M     +PD+ ++N LI G CRV EV    +  K
Sbjct: 227 IVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK 286

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E++ +   +PDVV+++ +I  + + G+MD A     EM   G+ P  V + ++I GF + 
Sbjct: 287 EMQHRY-VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRA 345

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G+M  A  +R+ M+ FG LPDVVT+++L++G C+  +L    KL +EM+ + ++P++ TF
Sbjct: 346 GSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTF 405

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           T LI+  C++    +A +    L    L P    YN +IDG C+ G++ +AN +  +M  
Sbjct: 406 TTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHA 465

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +   P+ +T++ILI  HC KG++ +A    ++M++ G  P+  T NS+I    + G   +
Sbjct: 466 REILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKK 525

Query: 561 AFRIMQRASED 571
             + +Q+  +D
Sbjct: 526 GQQFLQKMRQD 536



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N  L     TYN V++ LC+    D  + VF  M      P+       +    R G
Sbjct: 217 SMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVG 276

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           +   A     + +   VT     ++ L+    ++   D A    +E   L   PD   + 
Sbjct: 277 EVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYT 336

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ++I G  R G + +A     +M  FGC PD+VTYNTL++GLC+ + +    +LL E++ +
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER 396

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              +PD+ T+T++I GYC+ G  + A  +++ +    ++P  VT+N LIDG  + G++  
Sbjct: 397 G-VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAK 455

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + + M +   LP+ +T+S LID +C  GQ+       DEM  K   PN+ T+  +I 
Sbjct: 456 ANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIK 515

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C+   +   ++FL++++ +++ P    +N +I G+ K  N+  A  +   ME++  +P
Sbjct: 516 GYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRP 575

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           D VT+ ++I G   +G M +A  +F  M   G  PD  T  SLI+  +  G   +AF++
Sbjct: 576 DAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQL 634



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 191/373 (51%), Gaps = 3/373 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           RAG    A+         +  ++ +  N ++++  K    D A  +  E  +    PD  
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T N+LI    R G+V  A      M + G  P IVTYN+++ GLC+     +  E+ + +
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +   +PDV ++  +I G+C++G++ +A   Y EM    + P  V+F+ LI  F + G 
Sbjct: 254 D-QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGE 312

Query: 383 MVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           M  A  Y+RE M   G +PD V ++ +I G+CR G +++ L++ DEM G    P+V T+ 
Sbjct: 313 MDHAGAYLRE-MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYN 371

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+N LCK++RL DA + L +++   + P    +  +I G+C+ GN + A  +   +  +
Sbjct: 372 TLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ 431

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           R +PD VT+  LI G C KG + +A  +++ M      P+ IT + LI    + G   +A
Sbjct: 432 RLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA 491

Query: 562 FRIMQRASEDQNL 574
           F  +    +  NL
Sbjct: 492 FGFLDEMVKKGNL 504



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 99/233 (42%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P    +  +I  Y +  K  +A   +  +    +   A   N L+    + G    A+ 
Sbjct: 84  TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
               +LS     +  T + ++  YC+  + +    +  EM+ + + P+V T  +LI+A  
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARF 203

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +   ++ A   +  +    L P    YN V+ G CK    D+A  +   M++    PD  
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +F ILI G C  G + EA+  + +M      PD ++ + LI    + G  + A
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHA 316



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 36/177 (20%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN +++  C                                   R+G     +  L
Sbjct: 506 NIRTYNSIIKGYC-----------------------------------RSGNVKKGQQFL 530

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + R   V      +N+L++  +K+ N   A  +F    +   +PD  T+N++I G S  
Sbjct: 531 QKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQ 590

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           G ++ A   F  MG  G  PD  TY +LI+G        +  +L  E+  +  F+PD
Sbjct: 591 GNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRG-FAPD 646


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 240/460 (52%), Gaps = 27/460 (5%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM---- 182
            EV++ +  P   L+F  ++   L   H+ ++Y L++  L   G   ++ V  +++    
Sbjct: 90  FEVLRLIKTPSKALQFFNWA-PELGFTHNDQSYFLMLEIL---GRARNLNVARNFLFSIK 145

Query: 183 -RSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            RS+G +    + + F +S IR    AG    +  + +  +   V+ S   +NSLL  L+
Sbjct: 146 RRSNGTVK---LEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILL 202

Query: 238 KQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
           K+   + A  +F E    Y   PDT+TFNILI+G  +   V + F FF +M  F C PD+
Sbjct: 203 KRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDL 262

Query: 297 VTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           VTYNTL+ GLCR  +V   H ++   VK  +  +PDVVTYT+++ GYC   ++D+A  ++
Sbjct: 263 VTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVF 322

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG-YLPDVVTFSSLIDGYCR 414
            EM S G+KP+ +T+N LI G  +V  +   + + E  L  G ++PD  T ++L++ +C 
Sbjct: 323 EEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCN 382

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV----- 469
            G LN  L++ ++M   N+ P+  T+++LI  LC+      A +   +L   +++     
Sbjct: 383 AGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDG 442

Query: 470 --PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    Y  + +  C+ G   +A  +  ++  KR   D ++F ILI GHC +G      
Sbjct: 443 CTPLVAAYKSMFEFLCRNGKTAKAERVFRQLM-KRGTQDPLSFKILIKGHCREGTFEAGY 501

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +   MLR    PD  T  SLI  LL+ G P  A++ +++
Sbjct: 502 ELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEK 541



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 160/322 (49%), Gaps = 14/322 (4%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN LI+   + G  +++ + F  M S G SP +VT+N+L+  L +         +  E+ 
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                +PD  T+  +I G+CK   +D+    + EM+     P  VT+N L+DG  + G +
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278

Query: 384 VSAEYMRERML--SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
             A  +   M+  S    PDVVT+++L+ GYC   ++++ L + +EM  K L PN  T+ 
Sbjct: 279 NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYN 338

Query: 442 ILINALCKENRLNDARR-FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            LI  LC+  +++  ++ F   L     +P     N +++  C AGN+++A  +  +M  
Sbjct: 339 TLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMV 398

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNK------MLR-IGCAPDDITVNSLISCLL 553
              +PD  T+++LI   C +G    A  +F++      +LR  GC P      S+   L 
Sbjct: 399 LNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLC 458

Query: 554 KGGMPNEAFRI----MQRASED 571
           + G   +A R+    M+R ++D
Sbjct: 459 RNGKTAKAERVFRQLMKRGTQD 480



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 216/489 (44%), Gaps = 54/489 (11%)

Query: 127 LEVIKRLDNPKLGLKFLEFS---RVNLSLNHSFKTYNLVMRSLCEMGL-HDSVQVVFDYM 182
           LE++ R  N  +   FL FS   R N ++    + +N ++RS  + GL  +SVQV F+ M
Sbjct: 125 LEILGRARNLNVARNFL-FSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQV-FNSM 182

Query: 183 RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNN 241
           +S G  P+       +   ++ G+ + A+ +  +      VT  T+ +N L+    K + 
Sbjct: 183 KSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSM 242

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG-------------------------- 275
            DE    FKE  R    PD  T+N L+ GL R G                          
Sbjct: 243 VDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTY 302

Query: 276 -----------EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
                      E+ +A   F +M S G  P+ +TYNTLI GLC V ++ +  ++ +    
Sbjct: 303 TTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALG 362

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
              F PD  T  ++++ +C  G ++ A  ++ +M    ++P + T++VLI    + GN  
Sbjct: 363 GGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFE 422

Query: 385 SAEYM------RERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            AE +      +E +L   G  P V  + S+ +  CRNG+  +  ++  ++  +  + + 
Sbjct: 423 RAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG-TQDP 481

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            +F ILI   C+E         L  +   D VP    Y  +IDG  + G    A   + +
Sbjct: 482 LSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEK 541

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG-G 556
           M +    P+  TF  ++     KG   E+      ML  G    +I +++    LL G G
Sbjct: 542 MIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLE-GKIRQNINLSTHTVRLLFGSG 600

Query: 557 MPNEAFRIM 565
           + ++AF+I+
Sbjct: 601 LRDKAFKIV 609



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 151/337 (44%), Gaps = 41/337 (12%)

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT--YT 336
           KA +FF      G + +  +Y  ++  L R   +      L  +K +S  +  +    + 
Sbjct: 101 KALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFN 160

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS- 395
           S+I  Y K G   ++  ++N M S G+ PS VTFN L+    K G    A+ + + MLS 
Sbjct: 161 SLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST 220

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           +G  PD  TF+ LI G+C+N  +++G +   EM      P++ T+  L++ LC+  ++N 
Sbjct: 221 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNI 280

Query: 456 ARRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           A   +  +  K  +L P    Y  ++ G+C    +DEA V+  EM  K  KP+++T+  L
Sbjct: 281 AHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTL 340

Query: 514 IIG------------------------------------HCMKGRMVEAISIFNKMLRIG 537
           I G                                    HC  G + +A+ +F KM+ + 
Sbjct: 341 IKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLN 400

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
             PD  T + LI  L + G    A ++    SE + L
Sbjct: 401 VRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEIL 437


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 207/404 (51%), Gaps = 4/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN  +  LC+ G       V D M  +GH P+       ++   + G+ D AKG+++Q 
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T  +N+L+ AL  QN  +EA+ + +E       PD +TFNILI  L ++G+ 
Sbjct: 362 VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 421

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP-DVVTYT 336
                 F +M S GC+PD VTYN LI  LC + ++    +LLKE++  S   P   VTY 
Sbjct: 422 HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEME--SNGCPRSTVTYN 479

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I   CK  ++++A  ++++M++ GI  SAVTFN LIDG  K   +  A  + E+M+  
Sbjct: 480 TIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKE 539

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P  +T++S++  YC+ G L +   + + M       +V T+  LIN LCK  R   A
Sbjct: 540 GLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA 599

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L+ ++   + P P  YNPVI    +  N+ +A  +  EM E    PD +T+ I+  G
Sbjct: 600 LKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRG 659

Query: 517 HCMKGRMV-EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            C  G  + EA     +M+  G  P+  +   L   LL  GM +
Sbjct: 660 LCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDD 703



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 214/442 (48%), Gaps = 2/442 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L  ++   +P+  L+ L  +        S   Y  +++ L   G  D ++ +   MR +G
Sbjct: 60  LTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREG 119

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLL-SQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           H   + ++  FV S  R  + D A  L+ +Q     V   T +YN LLN L + +     
Sbjct: 120 HEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLL 179

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             ++ E      QPD  T N LI+ L R  +V+ A     +M S   +PD  T+ TL+ G
Sbjct: 180 ESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQG 239

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
                 +     + K    ++  SP  VT   +I+GYCK+G+++ A G   +  + G +P
Sbjct: 240 FIEEGSIEAALRV-KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEP 298

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             VT+N  +    + G++  A  + + ML  G+ PDV T++++I+   +NG+L++   + 
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 358

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           ++M  +   P+  TF  LI ALC +NRL +A    ++L    L P  + +N +I+  CK 
Sbjct: 359 NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 418

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G+      +  EM+   C PD+VT+ ILI   C  G++V A+ +  +M   GC    +T 
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTY 478

Query: 546 NSLISCLLKGGMPNEAFRIMQR 567
           N++I  L K     EA  +  +
Sbjct: 479 NTIIDALCKQMRIEEAEEVFDQ 500



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 200/418 (47%), Gaps = 11/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T+  +M+   E G  ++   V   M   G  P    +   ++   + G+ + A G + + 
Sbjct: 232 TFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P +VT     YN+ ++ L +  +   A+ +     +    PD +T+N +I  LS
Sbjct: 292 IADGFEPDQVT-----YNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLS 346

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + GE+ +A      M   GC PD  T+NTLI  LC  N +    +L +E+  K   SPDV
Sbjct: 347 KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG-LSPDV 405

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +I+  CK+G       ++ EM S G  P  VT+N+LID    +G +V+A  + + 
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G     VT++++ID  C+  ++ +  ++ D+M    +S +  TF  LI+ LCK  R
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA   ++Q+    L P    YN ++  +CK G++ +A  I+  M     + D VT+  
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G C  GR   A+ +   M   G  P     N +I  L +     +A  + +  +E
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTE 643



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 197/408 (48%), Gaps = 1/408 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  L E      ++ V++ M   G  P+   +   + +  RA +   A  +L +  
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V      + +L+   +++ + + A+ +  +       P   T N+LI G  ++G V+
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A  +     + G  PD VTYNT +  LC+   V+   +++ ++  +    PDV TY +V
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM-DLMLQEGHDPDVFTYNTV 341

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+   K G++D+A GI N+M   G  P   TFN LI        +  A  +   +   G 
Sbjct: 342 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGL 401

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PDV TF+ LI+  C+ G  + G++L +EMK    +P+  T+ ILI+ LC   +L +A  
Sbjct: 402 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD 461

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            LK+++ N        YN +ID  CK   ++EA  +  +M+        VTF  LI G C
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLC 521

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              R+ +A  +  +M++ G  P +IT NS+++   K G   +A  I++
Sbjct: 522 KAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILE 569



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 196/409 (47%), Gaps = 8/409 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMR---SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           T N+++   C+MG    V+    Y++   +DG  P+      FV    + G    A  ++
Sbjct: 267 TVNVLINGYCKMG---RVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM 323

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                       F YN+++N L K    DEA  +  +       PDT TFN LI  L   
Sbjct: 324 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQ 383

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +++A +   ++   G SPD+ T+N LI+ LC+V +   G  L +E+K  S  +PD VT
Sbjct: 384 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK-SSGCAPDEVT 442

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I   C +GK+  A  +  EM S G   S VT+N +ID   K   +  AE + ++M 
Sbjct: 443 YNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMD 502

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           + G     VTF++LIDG C+  +++   +L ++M  + L P+  T+  ++   CK+  L 
Sbjct: 503 AHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLK 562

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L+ +  N        Y  +I+G CKAG    A  ++  M  K  +P    +  +I
Sbjct: 563 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI 622

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP-NEAF 562
                +  + +A+S+F +M  +G  PD +T   +   L +GG P  EAF
Sbjct: 623 QSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAF 671



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 36/256 (14%)

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           ++L     + +F+P    Y  +I      G  D   G+  EM   G +  A      ++ 
Sbjct: 74  QMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVES 133

Query: 377 FGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           + ++     A + +R ++ +FG   D   ++ L++      ++     + +EM  + + P
Sbjct: 134 YARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQP 193

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +V T   LI AL                                   C+A  V  A +++
Sbjct: 194 DVVTLNTLIKAL-----------------------------------CRAHQVRTAVLML 218

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            EM      PD+ TFT L+ G   +G +  A+ +  KM+  GC+P  +TVN LI+   K 
Sbjct: 219 EEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKM 278

Query: 556 GMPNEAFRIMQRASED 571
           G   +A   +Q+   D
Sbjct: 279 GRVEDALGYIQKEIAD 294



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 97/246 (39%), Gaps = 16/246 (6%)

Query: 105 RSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMR 164
           RS+   +T    LC+++    + EV  ++D                 ++ S  T+N ++ 
Sbjct: 473 RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAH--------------GISRSAVTFNTLID 518

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
            LC+    D    + + M  +G  P++      ++   + G    A  +L         +
Sbjct: 519 GLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEI 578

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
               Y +L+N L K      A+ + +       +P    +N +IQ L R   ++ A   F
Sbjct: 579 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLF 638

Query: 285 YDMGSFGCSPDIVTYNTLISGLCR-VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
            +M   G  PD +TY  +  GLCR    +    + L E+  K  F P+  ++  +  G  
Sbjct: 639 REMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKG-FMPEFSSFRMLAEGLL 697

Query: 344 KLGKMD 349
            LG  D
Sbjct: 698 NLGMDD 703


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 208/405 (51%), Gaps = 14/405 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L+ S  T+  ++   C  G     Q +FD MR  G +P   +    +       K + A+
Sbjct: 178 LSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAE 237

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +    R   V  + + YN+L++   K  NA +A+ ++++       PD  TF ILI GL
Sbjct: 238 SMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGL 297

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + GE+K A   F +M  F  +P+I  YN+LI   C+V +V+    L  E++ + E SPD
Sbjct: 298 CKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE-RFEVSPD 356

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TY+ +I G C + + ++A  I+ +M   GI  ++VT+N LIDG  K G M  A  +  
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICS 416

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M   G  P+V+TFS+LIDGYC+   L   + +  EM  K+LSP+V T+T +I+  CK  
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE---MEEKRCKPD-- 506
            + +A +    +  N + P  +  + ++DG CK G + +A  +  E    +  RC  D  
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAG 536

Query: 507 --------KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
                    V +T LI G C  G+  +A+ +F+ M R G  PD++
Sbjct: 537 GSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEV 581



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 189/362 (52%), Gaps = 7/362 (1%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K +  +  LS +      ++    N LL  LVK    +    +++E       P   TF 
Sbjct: 127 KMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFG 186

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEV 322
            LI G  R G++ +A E F +M   G  P ++ Y  LI GLC   ++ E    H  ++EV
Sbjct: 187 TLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREV 246

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                  P+V TY +++ GYCKL    +A  +Y +M   G+ P  VTF +LIDG  K G 
Sbjct: 247 GVY----PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE 302

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M +A  +   M+ F   P++  ++SLID YC+ G +++ + L  E++   +SP+V+T++I
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSI 362

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI  LC  +R  +A    +++    ++     YN +IDG CK G +D+A  I ++M E  
Sbjct: 363 LIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG 422

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            +P+ +TF+ LI G+C    +  A+ I+++M+    +PD +T  ++I    K G   EA 
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 482

Query: 563 RI 564
           ++
Sbjct: 483 KL 484



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 180/352 (51%), Gaps = 6/352 (1%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYM-FKEYFRLYSQPDTW-TFNILIQGLSRIGEVKK 279
           ++ + ++ N L+  LVK +    A  + F E  RL S   T   +  LI  L ++  V++
Sbjct: 74  LSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEE 133

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A   ++ +G+   +  I   N L+  L +         + +E+   +  SP V+T+ ++I
Sbjct: 134 ALSMYHKVGA---ALTIQACNVLLYVLVKTGRFELLWRIYEEM-ISNGLSPSVITFGTLI 189

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G C+ G + +A  +++EM   GI P+ + + +LI G      +  AE M   M   G  
Sbjct: 190 DGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVY 249

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+V T+++L+DGYC+     Q L+L  +M G+ L P+V TF ILI+ LCK   +  AR  
Sbjct: 250 PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNL 309

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
              +    + P   +YN +ID +CK G+V EA  +  E+E     PD  T++ILI G C 
Sbjct: 310 FVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             R  EA +IF KM + G   + +T NSLI    K G  ++A  I  + +E+
Sbjct: 370 VSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTEN 421



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 157/338 (46%), Gaps = 49/338 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C++        ++  M  +G +P+       +    + G+  AA+ L    
Sbjct: 254 TYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNM 313

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI--- 274
               VT +  +YNSL++A  K  +  EA+ +F E  R    PD +T++ILI+GL  +   
Sbjct: 314 IKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRT 373

Query: 275 --------------------------------GEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                           G++ KA E    M   G  P+++T++TL
Sbjct: 374 EEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTL 433

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G C++  +     +  E+  KS  SPDVVTYT++I G+CK G M +A  +Y++M   G
Sbjct: 434 IDGYCKIRNLQAAMGIYSEMVIKS-LSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNG 492

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF----------GYLPDV---VTFSSLI 409
           I P+  T + L+DG  K G +  A  +    + F          G  P +   V +++LI
Sbjct: 493 ITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALI 552

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            G C++GQ ++ +KL  +M+   L P+   + +++  L
Sbjct: 553 HGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 16/292 (5%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FLE  R  +S +    TY++++R LC +   +    +F+ M  +G L NS      +  C
Sbjct: 345 FLELERFEVSPD--VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGC 402

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + GK D A  + SQ     V  +   +++L++   K  N   A+ ++ E       PD 
Sbjct: 403 CKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDV 462

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+  +I G  + G +K+A + + DM   G +P+  T + L+ GLC+  +++   EL  E
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522

Query: 322 -VKFKSE--------FSPDV---VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++F++           P +   V YT++I G C+ G+  KA  ++++M   G++P  V 
Sbjct: 523 KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVI 582

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           + V++ G  +V  ++    +   ML FG +P+      L + Y  +G L   
Sbjct: 583 YVVMLRGLFQVKYILMM--LHADMLKFGVIPNSAVHVILCECYQESGFLKSA 632


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 204/377 (54%), Gaps = 1/377 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+S      +    +AGK + A+ L  +     VT ST  Y SL++ L   N+ D+A  +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F +  R    P   T+N++I    + G +++A +    M   G  PD+VTYNT++ GLC+
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
            + V     L  E++ +   +P+  ++ ++I G C+  K+D+A  +++EM +  I P + 
Sbjct: 128 SSRVEEALLLFNEME-RLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           ++ +LIDG  K G +  A  + +RML  G  P  VT++ +I G C    L++ L+L   M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           + K   P+ +TF ILI+A CK  +L++A R LK++  +  VP    Y+ +I G C    V
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           D+A  ++ +M +++CKP  VT   LI G C  GR+ EA  + + M+  G +PD +T N+L
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 549 ISCLLKGGMPNEAFRIM 565
           +    + G    A  ++
Sbjct: 367 VHGHCRAGQTERARELL 383



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 214/426 (50%), Gaps = 3/426 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ + C+ G+ +    +   M  DGH+P+       +    ++ + + A  L ++ 
Sbjct: 82  TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   +N+++  L +Q+  D+A  +F E       PD+W++ ILI GL++ G++
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKL 201

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++ F  M   G +P  VTYN +I G+C    +    EL K ++ K    P   T+  
Sbjct: 202 NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG-CRPSRFTFNI 260

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK GK+D+A  +   M   G  P  VT++ LI G   +  +  A ++ E M+   
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT ++LI G C+ G++ +  ++ D M     SP+V T+  L++  C+  +   AR
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    L P    Y  ++ G CKA  + EA  + A+M+   C P+  T+T LI+G 
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           C  G++   + +F +M+  G +PD +   +L + L K G    A  I++   E  +L+  
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE--SLRSE 498

Query: 578 SWKKAV 583
           +W   V
Sbjct: 499 AWGDEV 504



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 202/410 (49%), Gaps = 1/410 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   Y  ++  LC     D  + +F  M   G  P+       + +  + G  + A  L+
Sbjct: 44  STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLI 103

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +            YN++++ L K +  +EA+ +F E  RL   P+  + N +I GL + 
Sbjct: 104 KKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ 163

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            ++ +A + F++M +    PD  +Y  LI GL +  ++   ++L + +   S  +P  VT
Sbjct: 164 SKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRM-LDSGITPSAVT 222

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  VI G C    +D+A  ++  M S G +PS  TFN+LID   K G +  A  + +RM 
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G++PDVVT+S+LI G C   +++    L ++M  +   P V T   LI+ LCK  R+ 
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +AR  L  +  +   P    YN ++ G C+AG  + A  ++++M  +   P+ VT+T L+
Sbjct: 343 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            G C   R+ EA  +F +M   GCAP+  T  +LI      G  +   ++
Sbjct: 403 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKL 452



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y +++  L + G  +  + +F  +   G  P++      +     A   D A+ L +  
Sbjct: 12  SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YN +++A  K+   +EA  + K+       PD  T+N ++ GL +   V
Sbjct: 72  NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F +M   GC+P+  ++NT+I GLC+ +++ +  ++  E++ K +  PD  +Y  
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK-DIPPDSWSYGI 190

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K GK+++A  ++  M   GI PSAVT+NV+I G      +  A  + + M S G
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P   TF+ LID +C+ G+L++  +L   M      P+V T++ LI+ LC   R++DAR
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +      P     N +I G CKAG + EA  ++  M      PD VT+  L+ GH
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C  G+   A  + + M+  G AP+ +T  +L+S L K     EA
Sbjct: 371 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 205/430 (47%), Gaps = 7/430 (1%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           L F E  R+  + N   +++N ++  LC+    D    VF  M +    P+S      + 
Sbjct: 136 LLFNEMERLGCTPNR--RSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILID 193

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
              +AGK + A  L  +     +T S   YN +++ +      DEA+ +FK       +P
Sbjct: 194 GLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP 253

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
             +TFNILI    + G++ +AF     M   G  PD+VTY+TLISGLC +  V     LL
Sbjct: 254 SRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 313

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +++  K +  P VVT  ++I G CK G++ +A  + + M S G  P  VT+N L+ G  +
Sbjct: 314 EDM-VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G    A  +   M++ G  P+VVT+++L+ G C+  +L +   +  +MK    +PN++T
Sbjct: 373 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 432

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T LI   C   +++   +   ++    + P   +Y  +    CK+G    A  I+ E  
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR 492

Query: 500 E---KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           E        D+V +   + G    G+M  A+     M+R G  P      SL++ L K G
Sbjct: 493 ESLRSEAWGDEV-YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551

Query: 557 MPNEAFRIMQ 566
              EA  +++
Sbjct: 552 QGGEARAVLE 561



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 164/308 (53%), Gaps = 1/308 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD+W++ ILI GL++ G++  A   F  +   G +P  V Y +LI GLC  N      EL
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             ++  +    P  VTY  +I   CK G +++A  +  +M   G  P  VT+N ++DG  
Sbjct: 68  FADMNRRG-CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   +  A  +   M   G  P+  + +++I G C+  +++Q  ++  EM+ K++ P+ +
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           ++ ILI+ L K  +LN+A +  +++  + + P    YN VI G C A  +DEA  +   M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K C+P + TF ILI  HC +G++ EA  +  +M   G  PD +T ++LIS L      
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 559 NEAFRIMQ 566
           ++A  +++
Sbjct: 307 DDARHLLE 314



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 159/282 (56%), Gaps = 1/282 (0%)

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           SPD  +Y  LI GL +  ++     L +++   S  +P  V YTS+I G C     D A 
Sbjct: 7   SPDSWSYGILIDGLAKAGKLNDARNLFQKL-LHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ +MN  G  PS VT+NV+ID   K G +  A  + ++M+  G++PDVVT+++++DG 
Sbjct: 66  ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C++ ++ + L L +EM+    +PN  +   +I  LC++++++ A +   +++  D+ P  
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           + Y  +IDG  KAG ++EA  +   M +    P  VT+ ++I G C+   + EA+ +F  
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           M   GC P   T N LI    K G  +EAFR+++R ++D ++
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV 287



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 180/367 (49%), Gaps = 8/367 (2%)

Query: 137 KLGLKFLEFSR-VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL   +  F R ++  +  S  TYN+V+  +C     D    +F  MRS G  P+     
Sbjct: 200 KLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFN 259

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + +  + GK D A  LL +            Y++L++ L      D+A ++ ++  + 
Sbjct: 260 ILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +P   T N LI GL + G +K+A E    M S G SPD+VTYNTL+ G CR  +  R 
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            ELL ++  +   +P+VVTYT+++SG CK  ++ +A G++ +M S G  P+  T+  LI 
Sbjct: 380 RELLSDMVARG-LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE----MKGK 431
           GF   G +     +   M+  G  PD V + +L    C++G+  + L++  E    ++ +
Sbjct: 439 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSE 498

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                VY F +  + L +  ++  A  F++ +     +P P     ++ G CK+G   EA
Sbjct: 499 AWGDEVYRFAV--DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556

Query: 492 NVIVAEM 498
             ++ E+
Sbjct: 557 RAVLEEI 563


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 211/400 (52%), Gaps = 7/400 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY L + +LC +   +    +   M+  G  PN       +S   R GK + A GL  + 
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +T  YN+L+N L        A+ +F       S  +T T+N +I+GL   G++
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVT 334
           +KA   F  M   G  P +VTYNTLI+G      VN  AR  +L+KE    +   PD  T
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE----NGCEPDEWT 480

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  ++SG+ K GK++ A+  + EM  CG+ P+ V++  LIDG  K G +  A  + +RM 
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+V +++++I+G  +  + ++  K+CD+M  + L PNV T+T LI+ LC+  R  
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A +    ++    +P  + Y+ +I G C+ G  DEA +++ EME K   PD+VTFT LI
Sbjct: 601 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLI 660

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            G  + GR+  A  +  +M+ +GC P+  T + L+  L K
Sbjct: 661 DGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 210/424 (49%), Gaps = 34/424 (8%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VFD M  +G  PNS      ++     G+ D A  +L +     +  + + Y   + AL 
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
              + +EA+ +     +   +P+  T+  LI GLSR+G+++ A   ++ M   G  P+ V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 298 TYNTLISGLC-------------------------RVNEVARGHEL---------LKEVK 323
           TYN LI+ LC                           NE+ +G  L         L E  
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    P VVTY ++I+GY   G ++ A  + + M   G +P   T+N L+ GF K G +
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            SA +  + M+  G  P+ V++++LIDG+ ++G+++  L L   M+    +PNV ++  +
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           IN L KENR ++A +   ++    L+P    Y  +IDG C+ G    A  I  +ME+++C
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P+  T++ LI G C +G+  EA  +  +M R G APD++T  SLI   +  G  + AF 
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 674

Query: 564 IMQR 567
           +++R
Sbjct: 675 LLRR 678



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 211/447 (47%), Gaps = 36/447 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  + N ++  L +  + +  + ++  M + G  P+       ++   + GK   A+ +L
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           SQ    +++   F Y SL+    +  N D A  +F    +    P++ T++ LI GL   
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V +A +   +M   G  P + TY   I+ LC +       EL+  +K K    P+V T
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK-KRGCRPNVQT 340

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI-------------------D 375
           YT++ISG  +LGK++ A G+Y++M   G+ P+ VT+N LI                   +
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400

Query: 376 GFGKV----------------GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           G G +                G++  A  + E+ML  G LP VVT+++LI+GY   G +N
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
              +L D MK     P+ +T+  L++   K  +L  A  + +++    L P P  Y  +I
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG  K G VD A  ++  MEE  C P+  ++  +I G   + R  EA  I +KM+  G  
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
           P+ IT  +LI  L + G    AF+I  
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFH 607



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 1/310 (0%)

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           ++ N L+  L++   V+ A   +  M + G  P ++T+NTLI+ L +  +V     +L +
Sbjct: 164 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 223

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F+ + SPDV TYTS+I G+C+   +D A G+++ M   G  P++VT++ LI+G    G
Sbjct: 224 I-FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 282

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  M E M+  G  P V T++  I   C      + ++L   MK +   PNV T+T
Sbjct: 283 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ L +  +L  A     ++    LVP    YN +I+  C  G    A  I   ME  
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 402

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               +  T+  +I G C+ G + +A+ +F KML++G  P  +T N+LI+  L  G  N A
Sbjct: 403 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 462

Query: 562 FRIMQRASED 571
            R++    E+
Sbjct: 463 ARLLDLMKEN 472



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 139/256 (54%), Gaps = 1/256 (0%)

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           E+ R  + L E+     F   + +  +++    K   ++ A  +Y +M + GI+PS +TF
Sbjct: 143 EIRRVADFLNEISGMG-FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N LI+   K G +  AE +  ++  +   PDV T++SLI G+CRN  L+    + D M  
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           +   PN  T++ LIN LC E R+++A   L+++    + P  + Y   I   C   + +E
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 321

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +VA M+++ C+P+  T+T LI G    G++  AI +++KML+ G  P+ +T N+LI+
Sbjct: 322 AIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALIN 381

Query: 551 CLLKGGMPNEAFRIMQ 566
            L  GG  + A +I  
Sbjct: 382 ELCVGGRFSTALKIFH 397



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 147/303 (48%), Gaps = 1/303 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN +++ LC  G  +   V+F+ M   G LP        ++  +  G  + A  LL  
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +        + YN L++   K    + A + F+E       P+  ++  LI G S+ G+
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A      M   GC+P++ +YN +I+GL + N  +   ++  ++  +    P+V+TYT
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM-VEQGLLPNVITYT 587

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G C+ G+   A  I+++M      P+  T++ LI G  + G    AE + + M   
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 647

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD VTF+SLIDG+   G+++    L   M      PN  T+++L+  L KE  L + 
Sbjct: 648 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEE 707

Query: 457 RRF 459
           + F
Sbjct: 708 KIF 710



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 413 CRNGQ-LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           CRN + + +     +E+ G     ++Y+   L+  L K   +  AR   KQ+  + + P 
Sbjct: 138 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 197

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +N +I+   K G V EA +I++++ +    PD  T+T LI+GHC    +  A  +F+
Sbjct: 198 LLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFD 257

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +M++ GC P+ +T ++LI+ L   G  +EA  +++   E
Sbjct: 258 RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 67/154 (43%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N + ++YN V+  L +       + + D M   G LPN       +    R G+   A  
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +       +   + + Y+SL+  L ++  ADEA  + KE  R    PD  TF  LI G  
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 664

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +G +  AF     M   GC P+  TY+ L+ GL
Sbjct: 665 VLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 217/424 (51%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R  C  G  +     F  M  +G LPN       + +  +  K   A  LL   
Sbjct: 205 TYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM 264

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN ++N L ++    E   + +E  +    PD  TFN LI G   +G  
Sbjct: 265 ALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNF 324

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   G SP++VTY TLI+ +C+   + R  E L +++ +    P+  TYT+
Sbjct: 325 HQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG-LHPNGRTYTT 383

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ + G + +A  I  EM   G  P+ +T+N LI+G   +G M  A  + + M+  G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PDVV++S++I G+CRN +L +  +L  EM  K +SP+V T++ LI  LCK+ RL +  
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++    L P    Y  +I+ +C  G++D+A  +  EM +K   PD VT+ +LI G 
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS-----------CLLKG----GMPNEAF 562
             + R  EA  +  K+L     P++IT N+LI             L+KG    G+ NEA 
Sbjct: 564 NKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEAD 623

Query: 563 RIMQ 566
           R+++
Sbjct: 624 RVLE 627



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 219/420 (52%), Gaps = 16/420 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           LN +  +YN+V+  LC  G       + + M    ++P+       ++     G    A 
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L ++     ++ +   Y +L+N++ K  N + A+    +       P+  T+  LI G 
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           S+ G +K+A++   +M   G +P I+TYN LI+G C +  +     LL+E+  +  F PD
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM-IERGFIPD 447

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VV+Y+++ISG+C+  +++KA  +  EM + GI P   T++ LI G  K   +     + +
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            MLS G  PD VT++SLI+ YC  G L++ L+L DEM  K  SP++ T+ +LIN   K++
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVA 496
           R  +A+R L +L + + VP    YN +ID               GFC  G ++EA+ ++ 
Sbjct: 568 RTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLE 627

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M +K  K ++  + ++I GH   G + +A +++ +ML  G AP  +T+ +L   L   G
Sbjct: 628 SMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEG 687



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 212/411 (51%), Gaps = 2/411 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAKGL 213
           S   ++LV++S   + L +    + +  +S G +P        + + IR  +    A+G+
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +     V+ + + YN L+       N +  +  F E  R    P+  T+N +I    +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           + ++ +AF+    M   G +P++++YN +I+GLCR  ++    E+L+E+  K  + PD V
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS-KRRYVPDRV 309

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T+ ++I+GYC +G   +A  ++ EM   G+ P+ VT+  LI+   K GN+  A    ++M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P+  T+++LIDG+ + G L Q  ++  EM     +P + T+  LIN  C   R+
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA   L+++     +P    Y+ +I GFC+   +++A  +  EM  K   PD  T++ L
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL 489

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           I G C + R+ E   +F +ML +G  PD++T  SLI+     G  ++A R+
Sbjct: 490 IQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 35/342 (10%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +  +  F+++++  +R+  + KA        S+G  P +++YN ++  + R  +  +  E
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
            + +   +S  SP+V TY  +I G+C  G ++     + EM   G  P+ VT+N +ID +
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 378 GKV-----------------------------------GNMVSAEYMRERMLSFGYLPDV 402
            K+                                   G M     + E M    Y+PD 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VTF++LI+GYC  G  +Q L L  EM    LSPNV T+T LIN++CK   LN A  FL Q
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           ++   L P    Y  +IDGF + G + +A  I+ EM E    P  +T+  LI GHC+ GR
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           M +A  +  +M+  G  PD ++ +++IS   +     +AF++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 119/328 (36%), Gaps = 51/328 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C +G  +    +   M   G +P+       +S   R  + + A  L  + 
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++     Y+SL+  L KQ    E   +F+E   L   PD  T+  LI      G++
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA     +M   G SPDIVTYN LI+G  + +       LL ++ ++ E  P+ +TY +
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE-ESVPNEITYNT 593

Query: 338 --------------------------------------------------VISGYCKLGK 347
                                                             +I G+ K+G 
Sbjct: 594 LIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           ++KA  +Y EM   G  P +VT   L       G  V    + +  L    + +      
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKV 713

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           LI    + G ++    +  +M    L P
Sbjct: 714 LIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 241/490 (49%), Gaps = 10/490 (2%)

Query: 83  KEVNYRCSNEFWFVKVVC-TLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLK 141
           K +N+   ++F+ ++  C TL + + +     A+ L E ++        K LD+    L 
Sbjct: 67  KFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAA-------KTLDDEYASLV 119

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F            +   ++LV++S   + L D    +    ++ G +P        + + 
Sbjct: 120 FKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDAT 179

Query: 202 IRAGK-CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           IR+ +    A+ +  +    +V+ + F YN L+       N D A+ +F +       P+
Sbjct: 180 IRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+N LI G  ++ ++   F+    M   G  P++++YN +I+GLCR   +     +L 
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+  +  +S D VTY ++I GYCK G   +A  ++ EM   G+ PS +T+  LI    K 
Sbjct: 300 EMNRRG-YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           GNM  A    ++M   G  P+  T+++L+DG+ + G +N+  ++  EM     SP+V T+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LIN  C   ++ DA   L+ +K   L P    Y+ V+ GFC++ +VDEA  +  EM E
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K  KPD +T++ LI G C + R  EA  ++ +MLR+G  PD+ T  +LI+     G   +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538

Query: 561 AFRIMQRASE 570
           A ++     E
Sbjct: 539 ALQLHNEMVE 548



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 215/418 (51%), Gaps = 16/418 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  LC  G    V  V   M   G+  +       +    + G    A  + ++ 
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T S   Y SL++++ K  N + A+    +       P+  T+  L+ G S+ G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+    +M   G SP +VTYN LI+G C   ++     +L+++K K   SPDVV+Y++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG-LSPDVVSYST 455

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+SG+C+   +D+A  +  EM   GIKP  +T++ LI GF +      A  + E ML  G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T+++LI+ YC  G L + L+L +EM  K + P+V T+++LIN L K++R  +A+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575

Query: 458 RFLKQLKWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVAEMEEKR 502
           R L +L + + VP    Y+ +I+               GFC  G + EA+ +   M  K 
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
            KPD   + I+I GHC  G + +A +++ +M++ G     +TV +L+  L K G  NE
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 210/424 (49%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R  C  G  D    +FD M + G LPN       +    +  K D    LL   
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN ++N L ++    E  ++  E  R     D  T+N LI+G  + G  
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   G +P ++TY +LI  +C+   + R  E L +++ +    P+  TYT+
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG-LCPNERTYTT 385

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+ + G M++A  +  EMN  G  PS VT+N LI+G    G M  A  + E M   G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV++S+++ G+CR+  +++ L++  EM  K + P+  T++ LI   C++ R  +A 
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++    L P  F Y  +I+ +C  G++++A  +  EM EK   PD VT+++LI G 
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS-----------CLLKG----GMPNEAF 562
             + R  EA  +  K+      P D+T ++LI             L+KG    GM  EA 
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625

Query: 563 RIMQ 566
           ++ +
Sbjct: 626 QVFE 629



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 126/331 (38%), Gaps = 49/331 (14%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++   C  G  +    V + M+  G  P+       +S   R+   D A  + 
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +   T  Y+SL+    +Q    EA  +++E  R+   PD +T+  LI      
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL---CRVNEVAR----------------G 315
           G+++KA +   +M   G  PD+VTY+ LI+GL    R  E  R                 
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593

Query: 316 HELLKE---VKFKSEFS---------------------------PDVVTYTSVISGYCKL 345
           H L++    ++FKS  S                           PD   Y  +I G+C+ 
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G + KA  +Y EM   G     VT   L+    K G +     +   +L    L +    
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             L++   R G ++  L +  EM      PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 194/386 (50%), Gaps = 41/386 (10%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +P  VT     + +LLN L  +    +AV +F E  ++   P   T+  +I+GL +IG 
Sbjct: 137 LQPTHVT-----FGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGH 191

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A +    M   GC PD+V YNT+I  LC+            E+       P+VVTY+
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEM-VDQGIPPNVVTYS 250

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++ G+C LG++++AT ++ +M    + P+ VTF +L+DG  K G ++ A  + E M   
Sbjct: 251 SILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T+S+L+DGYC   Q+++  KL D M GK  +P+V  + ILIN  CK  RLN+A
Sbjct: 311 GVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEA 370

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKA------------------------------- 485
           +  L ++   DL P    Y+ ++ GFC+A                               
Sbjct: 371 KTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430

Query: 486 ----GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
               G++DEA  ++  M+E + +P    + ILI G C  G++  A  +F+ +   G  P 
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQR 567
            +T   +IS LLK G+ NEA  + ++
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRK 516



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 212/407 (52%), Gaps = 7/407 (1%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           LH     V  + +  G  P  P++ F   + S ++         L  Q     +  + + 
Sbjct: 47  LHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYT 106

Query: 229 YNSLLNALVKQNNADEAVYMFK---EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
              L+N L   +N D   + F    + F+L  QP   TF  L+ GL    ++  A + F 
Sbjct: 107 LTILINCLC-HSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFD 165

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           ++G  G +P ++TY T+I GLC++       +LLK+++ K    PDVV Y +VI   CK 
Sbjct: 166 EIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG-CKPDVVAYNTVIDSLCKD 224

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            + ++A   ++EM   GI P+ VT++ ++ GF  +G +  A  + ++M+    +P+ VTF
Sbjct: 225 RRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTF 284

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           + L+DG C+ G + +  ++ + M    + P+ YT++ L++  C ++++++A++    +  
Sbjct: 285 TILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVG 344

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P   +YN +I+G CK+  ++EA  +++EM ++   PD VT++ L+ G C  GR   
Sbjct: 345 KGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQV 404

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           A  +F +M   G  PD IT + L+  L K G  +EAFR+++   E +
Sbjct: 405 AQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK 451



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 211/422 (50%), Gaps = 9/422 (2%)

Query: 150 LSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           L L  +  T+  ++  LC    + D+V++ FD +   G  P+       +    + G   
Sbjct: 135 LGLQPTHVTFGTLLNGLCSKAKIIDAVKL-FDEIGKMGFAPSLITYTTIIKGLCKIGHTT 193

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL +            YN+++++L K   A+EA+Y F E       P+  T++ ++
Sbjct: 194 NALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSIL 253

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFK 325
            G   +G++ +A   F  M      P+ VT+  L+ GLC+   + E  R  E++ E    
Sbjct: 254 HGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE---- 309

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +   PD  TY++++ GYC   +MD+A  +++ M   G  PS   +N+LI+G  K   +  
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNE 369

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A+ +   M      PD VT+S+L+ G+C+ G+     KL  EM    L P+  T++IL++
Sbjct: 370 AKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLD 429

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK   L++A R LK ++ + + P   +YN +I G C  G ++ A  + + +  K  +P
Sbjct: 430 GLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQP 489

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             VT+T++I G   +G   EA  +F KM+  GC P+  T N  I   L+ G P+ A R++
Sbjct: 490 SVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLI 549

Query: 566 QR 567
           + 
Sbjct: 550 EE 551



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 187/395 (47%), Gaps = 1/395 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY  +++ LC++G   +   +   M   G  P+       + S  +  + + A    
Sbjct: 175 SLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFF 234

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +  +   Y+S+L+        +EA  +FK+       P+T TF IL+ GL + 
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKE 294

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +A   F  M   G  PD  TY+ L+ G C  +++    +L  ++     F+P V  
Sbjct: 295 GMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF-DIMVGKGFAPSVRV 353

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I+G+CK  ++++A  + +EM    + P  VT++ L+ GF + G    A+ + + M 
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S+G LPD +T+S L+DG C++G L++  +L   M+   + P++  + ILI  +C   +L 
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            AR     L    + P    Y  +I G  K G  +EA  +  +M    C P+  T+ + I
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAI 533

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            G    G    A+ +  +M+  G + D  T   L+
Sbjct: 534 QGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 147/288 (51%), Gaps = 1/288 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++  LC+ G+    + VF+ M  +G  P++      +       + D A+ L    
Sbjct: 283 TFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S  +YN L+N   K    +EA  +  E +     PDT T++ L+QG  + G  
Sbjct: 343 VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRP 402

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A + F +M S+G  PD +TY+ L+ GLC+   +     LLK ++ +S+  P +  Y  
Sbjct: 403 QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQ-ESKIEPHICIYNI 461

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  GK++ A  +++ +   GI+PS VT+ V+I G  K G    A  M  +M+  G
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
            LP+  T++  I G+ RNG  +  ++L +EM G+  S +  TF +L++
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 37/283 (13%)

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK------ 379
           +  SP  +T     S Y  L  +  A   +N++      P  V FN L+    K      
Sbjct: 28  TNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYST 87

Query: 380 ---------VGNMVSAEYMRE----------------------RMLSFGYLPDVVTFSSL 408
                    + N+    Y                         +M   G  P  VTF +L
Sbjct: 88  VISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTL 147

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ++G C   ++   +KL DE+     +P++ T+T +I  LCK     +A + LK+++    
Sbjct: 148 LNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGC 207

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN VID  CK    +EA    +EM ++   P+ VT++ ++ G C  G++ EA S
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATS 267

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +F +M+     P+ +T   L+  L K GM  EA R+ +  +E+
Sbjct: 268 LFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN 310


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 217/424 (51%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R  C  G  +     F  M  +G LPN       + +  +  K   A  LL   
Sbjct: 205 TYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLM 264

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN ++N L ++    E   + +E  +    PD  TFN LI G   +G  
Sbjct: 265 ALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNF 324

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   G SP++VTY TLI+ +C+   + R  E L +++ +    P+  TYT+
Sbjct: 325 HQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG-LHPNGRTYTT 383

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ + G + +A  I  EM   G  P+ +T+N LI+G   +G M  A  + + M+  G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PDVV++S++I G+CRN +L +  +L  EM  K +SP+V T++ LI  LCK+ RL +  
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++    L P    Y  +I+ +C  G++D+A  +  EM +K   PD VT+ +LI G 
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGF 563

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS-----------CLLKG----GMPNEAF 562
             + R  EA  +  K+L     P++IT N+LI             L+KG    G+ NEA 
Sbjct: 564 NKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEAD 623

Query: 563 RIMQ 566
           R+++
Sbjct: 624 RVLE 627



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 219/420 (52%), Gaps = 16/420 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           LN +  +YN+V+  LC  G       + + M    ++P+       ++     G    A 
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L ++     ++ +   Y +L+N++ K  N + A+    +       P+  T+  LI G 
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGF 388

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           S+ G +K+A++   +M   G +P I+TYN LI+G C +  +     LL+E+  +  F PD
Sbjct: 389 SQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM-IERGFIPD 447

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VV+Y+++ISG+C+  +++KA  +  EM + GI P   T++ LI G  K   +     + +
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            MLS G  PD VT++SLI+ YC  G L++ L+L DEM  K  SP++ T+ +LIN   K++
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQS 567

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVA 496
           R  +A+R L +L + + VP    YN +ID               GFC  G ++EA+ ++ 
Sbjct: 568 RTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLE 627

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M +K  K ++  + ++I GH   G + +A +++ +ML  G AP  +T+ +L   L   G
Sbjct: 628 SMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEG 687



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 213/411 (51%), Gaps = 2/411 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAKGL 213
           S   ++LV++S   + L +    + +  +S G +P        + + IR  +    A+G+
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +     V+ + + YN L+       N +  ++ F E  R    P+  T+N +I    +
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           + ++ +AF+    M   G +P++++YN +I+GLCR  ++    E+L+E+  K  + PD V
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS-KRRYVPDRV 309

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T+ ++I+GYC +G   +A  ++ EM   G+ P+ VT+  LI+   K GN+  A    ++M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P+  T+++LIDG+ + G L Q  ++  EM     +P + T+  LIN  C   R+
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA   L+++     +P    Y+ +I GFC+   +++A  +  EM  K   PD  T++ L
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSL 489

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           I G C + R+ E   +F +ML +G  PD++T  SLI+     G  ++A R+
Sbjct: 490 IQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRL 540



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 35/342 (10%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +  +  F+++++  +R+  + KA        S+G  P +++YN ++  + R  +  +  E
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
            + +   +S  SP+V TY  +I G+C  G ++     + EM   G  P+ VT+N +ID +
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 378 GKV-----------------------------------GNMVSAEYMRERMLSFGYLPDV 402
            K+                                   G M     + E M    Y+PD 
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VTF++LI+GYC  G  +Q L L  EM    LSPNV T+T LIN++CK   LN A  FL Q
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           ++   L P    Y  +IDGF + G + +A  I+ EM E    P  +T+  LI GHC+ GR
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           M +A  +  +M+  G  PD ++ +++IS   +     +AF++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 119/328 (36%), Gaps = 51/328 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C +G  +    +   M   G +P+       +S   R  + + A  L  + 
Sbjct: 415 TYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM 474

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++     Y+SL+  L KQ    E   +F+E   L   PD  T+  LI      G++
Sbjct: 475 VAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDL 534

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA     +M   G SPDIVTYN LI+G  + +       LL ++ ++ E  P+ +TY +
Sbjct: 535 DKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE-ESVPNEITYNT 593

Query: 338 --------------------------------------------------VISGYCKLGK 347
                                                             +I G+ K+G 
Sbjct: 594 LIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           ++KA  +Y EM   G  P +VT   L       G  V    + +  L    + +      
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKV 713

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           LI    + G ++    +  +M    L P
Sbjct: 714 LIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 219/436 (50%), Gaps = 7/436 (1%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK--TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           ++G  F   +++ L L H     T+  ++R LC  G       +FD M  +G  PN    
Sbjct: 106 RVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTY 164

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G   AA  LL     G       +Y S++++L K     EA  +F +   
Sbjct: 165 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG 224

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PD +T+  L+  L  + E K        M +    PD+V ++T++  LC+  +V  
Sbjct: 225 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 284

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            HE++ ++  +    PDVVTYT+++ G+C   +MD+A  +++ M   G  P  +++  LI
Sbjct: 285 AHEIV-DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+ K+  +  A Y+ E M    ++PD  T+++L+ G C  G+L   + L  EM  +   
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T++IL+++LCK   L +A   LK ++ ++L P   +YN +IDG C+AG ++ A  +
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 463

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + +  K   P   T+ I+I G C +G + EA  +F +M    C+PD  T N++    L+
Sbjct: 464 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 523

Query: 555 GGMPNEAFRIMQRASE 570
               NE  R +Q   E
Sbjct: 524 N---NETLRAIQLLEE 536



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 171/311 (54%), Gaps = 1/311 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D+A+  F     ++  P    F  L+  ++++            M SFG  P++ T 
Sbjct: 35  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 94

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N LI+  C +N V     +L ++  K    PD  T+T++I G C  GK+ +A  ++++M 
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P+ VT+  LI+G  KVGN  +A  +   M      PDVV ++S+ID  C++ Q+ 
Sbjct: 154 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 213

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L  +M G+ +SP+++T+T L++ALC           L Q+  + ++P   +++ V+
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G V EA+ IV  M ++  +PD VT+T L+ GHC++  M EA+ +F+ M+R G A
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 540 PDDITVNSLIS 550
           PD I+  +LI+
Sbjct: 334 PDVISYTTLIN 344



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 197/388 (50%), Gaps = 4/388 (1%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   +++F   ++S  +         L +Q     V  + +  N L+N+    N    A 
Sbjct: 52  PPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAF 111

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  +L  QPD  TF  LI+GL   G++ +A   F  M   G  P++VTY TLI+GL
Sbjct: 112 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 171

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+V   +    LL+ ++ +    PDVV YTS+I   CK  ++ +A  ++++M   GI P 
Sbjct: 172 CKVGNTSAAIRLLRSME-QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 230

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+  L+     +        +  +M++   LPDVV FS+++D  C+ G++ +  ++ D
Sbjct: 231 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 290

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M  + + P+V T+T L++  C ++ +++A +    +      P    Y  +I+G+CK  
Sbjct: 291 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIH 350

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +D+A  +  EM  K   PD  T+  L+ G C  GR+ +AI++F++M+  G  PD +T +
Sbjct: 351 KIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 410

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQNL 574
            L+  L K     EA  ++ +A E  NL
Sbjct: 411 ILLDSLCKNCHLEEAMALL-KAIEASNL 437



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 15/276 (5%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           +NTL   L   N +   H             P +V +  +++   K+        +  +M
Sbjct: 34  FNTLDDALSSFNRLLHMHP-----------PPSIVDFAKLLTSIAKMKHYSTVLSLSTQM 82

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
           +S G+ P+  T N+LI+ F  +  +  A  +  ++L  G+ PD  TF++LI G C  G++
Sbjct: 83  DSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI 142

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + L L D+M  +   PNV T+  LIN LCK    + A R L+ ++  +  P   +Y  +
Sbjct: 143 GEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI 202

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           ID  CK   V EA  + ++M  +   PD  T+T L+   C         ++ N+M+    
Sbjct: 203 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 262

Query: 539 APDDITVNSLISCLLKGGMPNEAFRI----MQRASE 570
            PD +  ++++  L K G   EA  I    +QR  E
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 1/183 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           KTYN +M  LC +G       +F  M + G +P+       + S  +    + A  LL  
Sbjct: 372 KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKA 431

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +     +YN +++ + +    + A  +F         P  WT+NI+I GL + G 
Sbjct: 432 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 491

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A + F +M    CSPD  TYNT+  G  + NE  R  +LL+E+  +  FS DV T T
Sbjct: 492 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG-FSADVSTTT 550

Query: 337 SVI 339
            ++
Sbjct: 551 LLV 553



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 39/167 (23%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           LK +E S    +LN   + YN+++  +C                                
Sbjct: 429 LKAIEAS----NLNPDIQVYNIIIDGMC-------------------------------- 452

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
              RAG+ +AA+ L S      +  S + YN +++ L K+   +EA  +F E       P
Sbjct: 453 ---RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 509

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           D  T+N + +G  +  E  +A +   +M + G S D+ T   L+  L
Sbjct: 510 DGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 222/456 (48%), Gaps = 39/456 (8%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E +   L+L+     Y  ++R L + G       V+  M S G +P+   +   +   
Sbjct: 79  FKEMALRGLALDTV--CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 136

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            +AG+  AA  +        +  +  +Y++L++ L K    D A+ M  +  + +  PDT
Sbjct: 137 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 196

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV-NEVARGHELLK 320
            T+N+LI GL + G+V+ A  FF +M   GC PD+ TYN LISG C+  N  A  H L +
Sbjct: 197 ITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQ 256

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E       + D+ TYT+++    K  K+++A  +  ++ + G  P+  T+N L++G  K+
Sbjct: 257 ETTING-CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS------ 434
           G +  A  +  +++  G  PDVVT++SLIDG  +  +  +  KL  EM  + L+      
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375

Query: 435 -----------------------------PNVYTFTILINALCKENRLNDARRFLKQLKW 465
                                        P+V T + +I+ L K  R+  A R  K ++ 
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 435

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L P   +Y+ +I G CKA  +D A  ++A+M++  C PD +T+ ILI G C  G +  
Sbjct: 436 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 495

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           A + F++ML  GC PD  T N LIS   K G  + A
Sbjct: 496 ARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 531



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 208/433 (48%), Gaps = 37/433 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + ++  L + G   +   +F  M + G  PN  +    +    +A K D A  +L+Q 
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 187

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG-- 275
           +    T  T  YN L++ L K  + + A   F E      +PD +T+NILI G  + G  
Sbjct: 188 KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 247

Query: 276 ----------------------------------EVKKAFEFFYDMGSFGCSPDIVTYNT 301
                                             ++++A      + + GC+P I TYN 
Sbjct: 248 DAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNA 307

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L++GLC++  +    +LL+++   +  +PDVVTYTS+I G  K  +  +A  ++ EM   
Sbjct: 308 LLNGLCKMGRLEEAIDLLRKI-VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 366

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+    V +  LI    + G +  A  + + M S G +PDVVT S++IDG  + G++   
Sbjct: 367 GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 426

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           +++   M+ + L+PN   ++ LI+ LCK  +++ A   L Q+K     P    YN +IDG
Sbjct: 427 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 486

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK+G+V+ A     EM E  CKPD  T+ ILI G C  G    A  +F+ M    C+ +
Sbjct: 487 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSAN 546

Query: 542 DITVNSLISCLLK 554
            +T  +LIS L K
Sbjct: 547 VVTYGALISGLCK 559



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 196/377 (51%), Gaps = 2/377 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G  ++ +  FD M   G  P+       +S   +AG  DAA   L+Q 
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257

Query: 218 RP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 T+    Y ++++ L K    +EAV + ++       P   T+N L+ GL ++G 
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A +    +   GC+PD+VTY +LI GL +       ++L KE+  +   + D V YT
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG-LALDTVCYT 376

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I    + GK+ +A+ +Y  M S G  P  VT + +IDG  K G + +A  + + M + 
Sbjct: 377 ALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 436

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+ V +S+LI G C+  +++  L++  +MK    +P+  T+ ILI+ LCK   +  A
Sbjct: 437 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 496

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R F  ++      P  + YN +I GFCKAGN D A  +  +M   RC  + VT+  LI G
Sbjct: 497 RAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISG 556

Query: 517 HCMKGRMVEAISIFNKM 533
            C + ++ +A   F  M
Sbjct: 557 LCKRRQLTKASLYFQHM 573



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 202/413 (48%), Gaps = 2/413 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN ++  LC+MG  +    +   +  +G  P+       +    +  +   A  L 
Sbjct: 20  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 79

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     + + T  Y +L+  L++     +A  ++K        PD  T + +I GLS+ 
Sbjct: 80  KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 139

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +  A   F  M + G +P+ V Y+ LI GLC+  ++    E+L ++K K+  +PD +T
Sbjct: 140 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK-KAFCTPDTIT 198

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY-MRERM 393
           Y  +I G CK G ++ A   ++EM   G KP   T+N+LI GF K GN  +A + + +  
Sbjct: 199 YNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQET 258

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G   D+ T+++++D   +N ++ + + L +++     +P + T+  L+N LCK  RL
Sbjct: 259 TINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 318

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A   L+++  N   P    Y  +IDG  K     EA  +  EM  +    D V +T L
Sbjct: 319 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTAL 378

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           I      G++ +A S++  M   GC PD +T++++I  L K G    A RI +
Sbjct: 379 IRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 2/390 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + + + ++G  P        ++   + G+ + A  LL +      T     Y SL++ L 
Sbjct: 8   LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 67

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K+  + EA  +FKE        DT  +  LI+ L + G++ +A   +  M S GC PD+V
Sbjct: 68  KEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV 127

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T +T+I GL +   +     + K ++ +   +P+ V Y+++I G CK  KMD A  +  +
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDCALEMLAQ 186

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M      P  +T+NVLIDG  K G++ +A    + ML  G  PDV T++ LI G+C+ G 
Sbjct: 187 MKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 246

Query: 418 LNQG-LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            +     L  E      + +++T+T +++ L K  ++ +A   ++++  N   P    YN
Sbjct: 247 TDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYN 306

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +++G CK G ++EA  ++ ++ +  C PD VT+T LI G   + R  EA  +F +M   
Sbjct: 307 ALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 366

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           G A D +   +LI  LL+ G   +A  + +
Sbjct: 367 GLALDTVCYTALIRELLQTGKIPQASSVYK 396



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 177/361 (49%), Gaps = 37/361 (10%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           +EAV + ++       P   T+N L+ GL ++G +++A +    +   GC+PD+VTY +L
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I GL +       ++L KE+  +   + D V YT++I    + GK+ +A+ +Y  M S G
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRG-LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P  VT + +IDG  K G + +A  + + M + G  P+ V +S+LI G C+  +++  L
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           ++  +MK    +P+  T+ +LI+ LCK   +  AR F  ++      P  + YN +I GF
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 483 CKAGNVD------------------------------------EANVIVAEMEEKRCKPD 506
           CKAGN D                                    EA  ++ ++    C P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             T+  L+ G C  GR+ EAI +  K++  GC PD +T  SLI  L K     EA+++ +
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 567 R 567
            
Sbjct: 362 E 362



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 35/250 (14%)

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+++A  +  ++ + G  P+  T+N L++G  K+G +  A  +  +++  G  PDVVT++
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLS-------------------------------- 434
           SLIDG  +  +  +  KL  EM  + L+                                
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 435 ---PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              P+V T + +I+ L K  R+  A R  K ++   L P   +Y+ +I G CKA  +D A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++A+M++  C PD +T+ +LI G C  G +  A + F++ML  GC PD  T N LIS 
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 552 LLKGGMPNEA 561
             K G  + A
Sbjct: 241 FCKAGNTDAA 250



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 74/150 (49%)

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++ + + L +++     +P + T+  L+N LCK  RL +A   L+++  N   P    Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +IDG  K     EA  +  EM  +    D V +T LI      G++ +A S++  M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           GC PD +T++++I  L K G    A RI +
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 150


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 210/386 (54%), Gaps = 3/386 (0%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   + EF  F+ S  +  +      L +Q     VT + +  N L+N L + N+ D AV
Sbjct: 84  PRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAV 143

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  + F+L   P   TFN LI GL   G++K+A E F +M   G  P++++YNT+I+GL
Sbjct: 144 SILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGL 203

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+    +   ++ K+++ ++   PDVVTY ++I   CK   ++ A    +EM   GI P+
Sbjct: 204 CKTGNTSMAVDVFKKME-QNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+N ++ GF  +G +  A  + + M+    +PD VT + L+DG C+ G +++   + +
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFE 322

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M  K + PN+ T+  L++  C +  +N+A++  + +      P    YN +I+GFCK+ 
Sbjct: 323 TMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSR 382

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +DEA  ++AEM  K   PD VT++ L+ G C  GR  EA++IF +M   G  P+ +T +
Sbjct: 383 RMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYS 442

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQ 572
            L+    K G  +EA ++++   E +
Sbjct: 443 ILLDGFCKHGHLDEALKLLKSMQEKK 468



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 208/406 (51%), Gaps = 40/406 (9%)

Query: 203 RAGKCDAAKGLLSQ-FRPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           R    D A  +L + F+ G   T STF  N+L+N L  +    EAV +F E  R   +P+
Sbjct: 135 RLNHVDFAVSILGKMFKLGIHPTASTF--NALINGLCNEGKIKEAVELFNEMVRRGHEPN 192

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             ++N +I GL + G    A + F  M   GC PD+VTYNT+I  LC+   V    E L 
Sbjct: 193 VISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLS 252

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+       P+V TY  ++ G+C LG++++AT ++ EM    + P  VT  +L+DG  K 
Sbjct: 253 EM-LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKE 311

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  + E M   G  P++ T+++L+DGYC    +N+  K+ + M  +  +P V+++
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSY 371

Query: 441 TILINALCKENRLNDARRFL-----------------------------------KQLKW 465
            ILIN  CK  R+++A+  L                                   K++  
Sbjct: 372 NILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCS 431

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L+P    Y+ ++DGFCK G++DEA  ++  M+EK+ +P+ V  TILI G  + G++  
Sbjct: 432 YGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEV 491

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           A  +F+K+   G  P   T   +I  LLK G+ +EA+ + ++  +D
Sbjct: 492 AKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 537



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 170/319 (53%), Gaps = 1/319 (0%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D+A+  F    R+  +P    F   +   ++  +          M  FG + ++ + N L
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+ LCR+N V     +L ++ FK    P   T+ ++I+G C  GK+ +A  ++NEM   G
Sbjct: 130 INCLCRLNHVDFAVSILGKM-FKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +P+ +++N +I+G  K GN   A  + ++M   G  PDVVT++++ID  C++  +N  +
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +   EM  + + PNV+T+  +++  C   +LN+A R  K++   D++P       ++DG 
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G V EA ++   M EK  +P+  T+  L+ G+C++  M EA  +F  M+R GCAP  
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 543 ITVNSLISCLLKGGMPNEA 561
            + N LI+   K    +EA
Sbjct: 369 HSYNILINGFCKSRRMDEA 387



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 183/377 (48%), Gaps = 1/377 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++  LC+ G       VF  M  +G  P+       + S  +    + A   LS+ 
Sbjct: 195 SYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + F YN +++        +EA  +FKE       PDT T  IL+ GL + G V
Sbjct: 255 LDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMV 314

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  P+I TYN L+ G C    +    ++  E+  +   +P V +Y  
Sbjct: 315 SEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF-EIMIRQGCAPGVHSYNI 373

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+CK  +MD+A  +  EM    + P  VT++ L+ G  + G    A  + + M S+G
Sbjct: 374 LINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYG 433

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP++VT+S L+DG+C++G L++ LKL   M+ K L PN+   TILI  +    +L  A+
Sbjct: 434 LLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAK 493

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +L  + + P    Y  +I G  K G  DEA  +  +ME+    P+  ++ ++I G 
Sbjct: 494 ELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 553

Query: 518 CMKGRMVEAISIFNKML 534
                   AI + ++M+
Sbjct: 554 LQNQDSSTAIRLIDEMV 570



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 198/416 (47%), Gaps = 1/416 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L ++ +  T+N ++  LC  G       +F+ M   GH PN       ++   + G    
Sbjct: 152 LGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSM 211

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +  +            YN+++++L K    ++A+    E       P+ +T+N ++ 
Sbjct: 212 AVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVH 271

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G   +G++ +A   F +M      PD VT   L+ GLC+   V+    L+ E   +    
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEA-RLVFETMTEKGVE 330

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P++ TY +++ GYC    M++A  ++  M   G  P   ++N+LI+GF K   M  A+ +
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M      PD VT+S+L+ G C+ G+  + L +  EM    L PN+ T++IL++  CK
Sbjct: 391 LAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCK 450

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L++A + LK ++   L P    +  +I+G   AG ++ A  + +++     +P   T
Sbjct: 451 HGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRT 510

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +T++I G   +G   EA  +F KM   G  P+  + N +I   L+    + A R++
Sbjct: 511 YTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 566



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 178/360 (49%), Gaps = 7/360 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ SLC+  L +        M   G  PN       V      G+ + A  L  + 
Sbjct: 230 TYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG--LSRI- 274
              +V   T     L++ L K+    EA  +F+       +P+  T+N L+ G  L R+ 
Sbjct: 290 VGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLM 349

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            E KK FE    M   GC+P + +YN LI+G C+   +     LL E+  K+  +PD VT
Sbjct: 350 NEAKKVFEI---MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA-LNPDTVT 405

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y++++ G C+ G+  +A  I+ EM S G+ P+ VT+++L+DGF K G++  A  + + M 
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                P++V  + LI+G    G+L    +L  ++    + P + T+T++I  L KE   +
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSD 525

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A    ++++ +  +P    YN +I GF +  +   A  ++ EM  KR   +  TF +L+
Sbjct: 526 EAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 151/289 (52%), Gaps = 3/289 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGKCDAAKGLLSQ 216
           T  +++  LC+ G+    ++VF+ M   G  PN       +   C++    +A K     
Sbjct: 300 TLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G        YN L+N   K    DEA  +  E +     PDT T++ L+QGL + G 
Sbjct: 360 IRQG-CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            K+A   F +M S+G  P++VTY+ L+ G C+   +    +LLK ++ K +  P++V +T
Sbjct: 419 PKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK-KLEPNIVHHT 477

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G    GK++ A  +++++ + GI+P+  T+ V+I G  K G    A  +  +M   
Sbjct: 478 ILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 537

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           G+LP+  +++ +I G+ +N   +  ++L DEM GK  S N+ TF +L++
Sbjct: 538 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 2/221 (0%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A   +  M     +PS   F   +  F K     +   +  +M  FG   +V + + 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+  CR   ++  + +  +M    + P   TF  LIN LC E ++ +A     ++    
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV-EA 526
             P    YN +I+G CK GN   A  +  +ME+  CKPD VT+  +I   C K R+V +A
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLC-KDRLVNDA 247

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   ++ML  G  P+  T N ++      G  NEA R+ + 
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKE 288



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 35/180 (19%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RM+     P V  F   +  + +  Q +  + LC++M    ++ NVY+  +LIN LC+ N
Sbjct: 78  RMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLN 137

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
                                              +VD A  I+ +M +    P   TF 
Sbjct: 138 -----------------------------------HVDFAVSILGKMFKLGIHPTASTFN 162

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI G C +G++ EA+ +FN+M+R G  P+ I+ N++I+ L K G  + A  + ++  ++
Sbjct: 163 ALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQN 222



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 1/189 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +LN    TY+ +M+ LC+ G       +F  M S G LPN       +    + G  D A
Sbjct: 398 ALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEA 457

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             LL   +  ++  +   +  L+  +      + A  +F + F    +P   T+ ++I+G
Sbjct: 458 LKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKG 517

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G   +A++ F  M   G  P+  +YN +I G  +  + +    L+ E+  K  FS 
Sbjct: 518 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK-RFSA 576

Query: 331 DVVTYTSVI 339
           ++ T+  ++
Sbjct: 577 NLSTFQMLL 585


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 219/445 (49%), Gaps = 36/445 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ SLC+  L +        M   G  P++      V      G+ + A  L  + 
Sbjct: 235 TYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRM 294

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN ++++L K    ++A     E       PD  T+  ++ GL  +G++
Sbjct: 295 EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQL 354

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   GC PD+V YNT+I  LC+   V    E L E+  +    P+ VTY++
Sbjct: 355 NEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG-IPPNAVTYST 413

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+C LG++D+AT ++ EM    + P+ +TF++L+DG  + G +  A ++ E M   G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++ T+++L++GYC   ++N+  K+ + M GK  +P+++++ ILIN  C   R++ A+
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533

Query: 458 RFLKQLKWNDLVPKPFMYNPV-----------------------------------IDGF 482
             L Q+    L P    YN +                                   ++G 
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G++DEA  +   M+EK+ +PD + +TILI G  + G++  A  +F+K+   G  P  
Sbjct: 594 CKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPG 653

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQR 567
            T N +I  LLK G+ +EA+ + ++
Sbjct: 654 RTYNVMIKGLLKEGLSDEAYELFRK 678



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 209/414 (50%), Gaps = 36/414 (8%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   ++EF  F+ S  +  +      L +Q     VT + +  N L+N L + N+ D AV
Sbjct: 89  PRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAV 148

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            ++ + F+L  QPD  TF  LI G+   G++K A E + +M   G  PD+++YNTLI+GL
Sbjct: 149 SVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGL 208

Query: 307 CRVNEVARGHELLKEVK-----------------------------FKSE-----FSPDV 332
           C          + K+++                             F SE       PD 
Sbjct: 209 CNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDA 268

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TY S++ G C LG++++AT ++  M   G KP  VT+N++ID   K   +  A      
Sbjct: 269 ITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE 328

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G  PDVVT+++++ G C  GQLN+ ++L  +M+ K   P+V  +  +I++LCK+  
Sbjct: 329 MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +NDA  FL ++    + P    Y+ ++ GFC  G +DEA  +  EM  +   P+ +TF+I
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           L+ G C +G + EA  +F  M   G  P+  T N+L++        NEA ++ +
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFE 502



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 225/492 (45%), Gaps = 69/492 (14%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
             + H+  + N+++  LC +   D    V+  M   G  P+       ++     GK   
Sbjct: 122 FGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKV 181

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  L ++            YN+L+N L    N + AV++FK+  +   +P+  T+N +I 
Sbjct: 182 AVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIID 241

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK------ 323
            L +   V  A +F  +M   G  PD +TYN+++ GLC + ++     L K ++      
Sbjct: 242 SLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKP 301

Query: 324 -----------------------FKSE-----FSPDVVTYTSVISGYCKLGKMDKATGIY 355
                                  F SE       PDVVTYT+++ G C LG++++A  ++
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLF 361

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            +M   G KP  V +N +ID   K   +  A      M+  G  P+ VT+S+++ G+C  
Sbjct: 362 KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNL 421

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN------------------------ 451
           GQL++  +L  EM G+N+ PN  TF+IL++ LC+E                         
Sbjct: 422 GQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTY 481

Query: 452 -----------RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
                      ++N+AR+  + +      P    YN +I+G+C +  +D+A  ++ +M  
Sbjct: 482 NALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSV 541

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K+  P+ VT+  ++ G C  GR+++A  +F KM   G  P  +T + L++ L K G  +E
Sbjct: 542 KKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDE 601

Query: 561 AFRIMQRASEDQ 572
           A ++ +   E +
Sbjct: 602 ALKLFKSMKEKK 613



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 188/362 (51%), Gaps = 15/362 (4%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQN-----------NADEAVYMFKEYFRLYSQPDTWTFN 265
           F    +T STF  N    +L K+N           + D+A+  F    R+  +P    F 
Sbjct: 41  FHRHHITTSTFTKNP---SLPKKNGGFASNSSNTISVDDALASFYRMARMNPRPSIVEFG 97

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
             +  ++++ +          M  FG +  + + N LI+ LCR+N V     +  ++ FK
Sbjct: 98  KFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKM-FK 156

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PDV+T+T++I+G C  GK+  A  +YNEM   G +P  +++N LI+G    GN   
Sbjct: 157 LGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNM 216

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A ++ ++M   G  P+VVT++++ID  C++  +N  +    EM G+ + P+  T+  +++
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 276

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC   +LN+A R  K+++ N   P    YN +ID   K   V++A   ++EM ++   P
Sbjct: 277 GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPP 336

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D VT+T ++ G C  G++ EAI +F KM + GC PD +  N++I  L K  + N+A   +
Sbjct: 337 DVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFL 396

Query: 566 QR 567
             
Sbjct: 397 SE 398



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 153/309 (49%), Gaps = 7/309 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ SLC+  L +        M   G  PN+      +      G+ D A  L  +  
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS---RIG 275
              V  +T  ++ L++ L ++    EA ++F+       +P+ +T+N L+ G     ++ 
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMN 495

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E +K FE    M   GC+PD+ +YN LI+G C    + +   LL ++  K + +P+ VTY
Sbjct: 496 EARKVFEI---MVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVK-KLTPNTVTY 551

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ G C +G++  A  ++ +M S G+ P+ +T+++L++G  K G++  A  + + M  
Sbjct: 552 NTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKE 611

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               PD++ ++ LI+G    G+L     L  ++    + P   T+ ++I  L KE   ++
Sbjct: 612 KKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDE 671

Query: 456 ARRFLKQLK 464
           A    ++ K
Sbjct: 672 AYELFRKWK 680



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 2/225 (0%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A   +  M     +PS V F   +    K+    +  Y+  +M  FG    V + + 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+  CR   ++  + +  +M    + P+V TFT LIN +C E ++  A     ++  + 
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV-EA 526
             P    YN +I+G C +GN + A  +  +ME+  CKP+ VT+  +I   C K R+V +A
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC-KDRLVNDA 252

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +   ++M+  G  PD IT NS++  L   G  NEA R+ +R  ++
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQN 297



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 81/201 (40%), Gaps = 35/201 (17%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN +M   C     +  + VF+ M   G  P+       ++    + + D AK LL+Q 
Sbjct: 480 TYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQM 539

Query: 217 ----FRPGEVTMSTFM------------------------------YNSLLNALVKQNNA 242
                 P  VT +T M                              Y+ LLN L K  + 
Sbjct: 540 SVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHL 599

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           DEA+ +FK       +PD   + ILI+G+   G+++ A   F  + + G  P   TYN +
Sbjct: 600 DEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVM 659

Query: 303 ISGLCRVNEVARGHELLKEVK 323
           I GL +       +EL ++ K
Sbjct: 660 IKGLLKEGLSDEAYELFRKWK 680


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 216/418 (51%), Gaps = 16/418 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+V+  LC +G  +    V   M   G  P+       V+   + G    A  L S+ 
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM 334

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y SL+N + K  N + A+  F +      +P+  T+  LI G S+ G +
Sbjct: 335 LRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFM 394

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+  + +M   G  P IVTYN L++G C    +     LL+ ++ K   SPDVV+Y++
Sbjct: 395 DEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG-LSPDVVSYST 453

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+C+  ++D+A  +  EM   G+ P A+T++ LI G  +   +  A  + + ML+  
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD  T++SLI+GYC+ G LN+ L L DEM  K   P+  T+ +LIN L K+ R  +A+
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 458 RFLKQLKWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVAEMEEKR 502
           R L +L +++ +P    Y+ +I+               GFC  G ++EA+ +   M ++ 
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
            KP++  + ++I GHC  G + +A  ++ +M+  G  P  +T+ +L+  L   GM  +
Sbjct: 634 QKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQ 691



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 214/413 (51%), Gaps = 2/413 (0%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAK 211
           N S   ++LV++S   +   +    + D  + +G +P        + S +R  K    A+
Sbjct: 129 NSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAE 188

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +  +     V+++ F YN L+       N +  +  F+E  R    P+  T+N +I   
Sbjct: 189 KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAY 248

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            ++  + +AF+    MG  G  P+++TYN +I+GLCRV  +     +L E+  K  F+PD
Sbjct: 249 CKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG-FAPD 307

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VTY ++++GYCK+G   +A  +++EM   G+ P  VT+  LI+   K GN+  A    +
Sbjct: 308 GVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFD 367

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M   G  P+ VT++SLI+G+ + G +++  ++ DEM      P + T+  L+N  C   
Sbjct: 368 QMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSG 427

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+ +A   L+ ++   L P    Y+ +I GFC+   +D A  + AEM EK   PD +T++
Sbjct: 428 RMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYS 487

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            LI G C + R+ EA  +F +ML     PD+ T  SLI+   K G  NEA  +
Sbjct: 488 SLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 203/346 (58%), Gaps = 1/346 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN+++ A  K    DEA  + +       +P+  T+N++I GL R+G +++      +M 
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G +PD VTYNTL++G C+V    +   L  E+  ++   PDVVTYTS+I+  CK G +
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM-LRNGLPPDVVTYTSLINTMCKAGNL 359

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++A   +++M+  G++P+ VT+  LI+GF + G M  A  + + M+  G+ P +VT+++L
Sbjct: 360 NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ++G+C +G++ + + L   M+GK LSP+V +++ +I   C+   L+ A +   ++    +
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y+ +I G C+   ++EA  +  EM  K   PD+ T+T LI G+C +G + EA++
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALN 539

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           + ++M++ G  PD +T N LI+ L K     EA R++ +   D+++
Sbjct: 540 LHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESI 585



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 219/424 (51%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++R  C  G  +     F+ M  +  LPN       + +  +  + D A  LL   
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM 264

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN ++N L +    +E   +  E  R    PD  T+N L+ G  ++G  
Sbjct: 265 GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNF 324

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   G  PD+VTY +LI+ +C+   + R  E   ++  +    P+ VTYTS
Sbjct: 325 HQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG-LRPNGVTYTS 383

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+ + G MD+A  I++EM   G  P+ VT+N L++G    G M  A  +   M   G
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV++S++I G+CR  +L++  ++  EM  K +SP+  T++ LI  LC++ RLN+A 
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++    L+P  F Y  +I+G+CK G+++EA  +  EM +K   PD VT+ +LI G 
Sbjct: 504 DLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI-SC----------LLKG----GMPNEAF 562
             + R  EA  +  K+      P+ IT ++LI SC          L+KG    G+ NEA 
Sbjct: 564 NKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEAD 623

Query: 563 RIMQ 566
           ++ +
Sbjct: 624 QVFE 627



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 167/344 (48%), Gaps = 10/344 (2%)

Query: 237 VKQNNADE-AVYMFK----EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF- 290
           + +N+ DE   Y F+     YF   S   +  F+++++  S +  ++KA     D+    
Sbjct: 105 LAENSVDEKGNYFFQCLKDTYFMCNSS--SAVFDLVVKSCSYLNFIEKALNIV-DLAKLN 161

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  P +++YN ++  + R  +     E +      S  S +V +Y  +I G+C  G ++ 
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
               + EM      P+ VT+N +I  + K+  +  A  +   M   G  P+++T++ +I+
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G CR G++ +   +  EM  K  +P+  T+  L+N  CK    + A     ++  N L P
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  +I+  CKAGN++ A     +M  +  +P+ VT+T LI G   KG M EA  I+
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIW 401

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           ++M+R G  P  +T N+L++     G   EA  ++ R  E + L
Sbjct: 402 DEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL-RGMEGKGL 444



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 30/234 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G  +    + D M   G LP++      ++   +  +   AK LL + 
Sbjct: 520 TYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKL 579

Query: 218 RPGEVTMSTFMYNSLLN-----------ALVK----QNNADEAVYMFKEYFRLYSQPDTW 262
              E   +   Y++L+            AL+K    +   +EA  +F+   +   +P+  
Sbjct: 580 FYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEA 639

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC------RVNEVARGH 316
            +N++I G  R G V KA + + +M  FG  P  VT   L+  L       ++N V R  
Sbjct: 640 VYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIR-- 697

Query: 317 ELLKEVKFK-SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
           ++L+  K   +E S  +V          K G +D    +  EM   G  PS   
Sbjct: 698 DILRSCKLSDAELSKALVQINH------KEGNIDAVFNLLTEMAKDGFLPSGAA 745


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 216/426 (50%), Gaps = 3/426 (0%)

Query: 142  FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            F EF  V +  N    +YN+V+  +C++G  +    +   M   G+ P+       ++  
Sbjct: 657  FREFPEVGVCWN--VASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGY 714

Query: 202  IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
             R G+ D    L+ + +   +  +++ Y S++  L +     EA   F E       PDT
Sbjct: 715  CRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774

Query: 262  WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
              +  L+ G  + G+++ A +FFY+M S   +PD++TY  +ISG C++ ++    +L  E
Sbjct: 775  IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834

Query: 322  VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
            +  +    PD++T+T +++GYCK G +  A  ++N M   G  P+ VT+  LIDG  K G
Sbjct: 835  MLCRG-LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893

Query: 382  NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            ++ SA  +   M   G  P++ T++S+++G C++G + + +KL  E +   L+ +  T+T
Sbjct: 894  DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 953

Query: 442  ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
             L++A CK   ++ A+  L ++    L P    +N +++GFC  G +++   ++  M  K
Sbjct: 954  TLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1013

Query: 502  RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               P+  TF  L+  +C++  +  A +I+  M   G  PD  T  +L+          EA
Sbjct: 1014 GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEA 1073

Query: 562  FRIMQR 567
            + + Q 
Sbjct: 1074 WFLFQE 1079



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 209/410 (50%), Gaps = 2/410 (0%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR-AGKCDAAKGLLS 215
            + +++  + L E G+    + VF+ M + G + +      +++   +   K   A  +  
Sbjct: 599  RVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFR 658

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            +F    V  +   YN +++ + +    +EA ++          PD  +++ +I G  R G
Sbjct: 659  EFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFG 718

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            E+ K ++    M   G  P+  TY ++I  LCR+ ++A   E   E+       PD + Y
Sbjct: 719  ELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEM-IGQGILPDTIVY 777

Query: 336  TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            T+++ G+CK G +  A+  + EM+S  I P  +T+  +I GF ++G+MV A  +   ML 
Sbjct: 778  TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC 837

Query: 396  FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
             G  PD++TF+ L++GYC+ G +    ++ + M     SPNV T+T LI+ LCKE  L+ 
Sbjct: 838  RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 897

Query: 456  ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
            A   L ++    L P  F YN +++G CK+GN++EA  +V E E      D VT+T L+ 
Sbjct: 898  ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957

Query: 516  GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +C  G M +A  I  +ML  G  P  +T N L++     GM  +  +++
Sbjct: 958  AYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1007



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 194/402 (48%), Gaps = 1/402 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY  ++  LC +      +  F  M   G LP++ +    V    + G   AA     + 
Sbjct: 741  TYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM 800

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++T     Y ++++   +  +  EA  +F E      +PD  TF  L+ G  + G +
Sbjct: 801  HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHI 860

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            K AF     M   GCSP++VTY TLI GLC+  ++   +ELL E+ +K    P++ TY S
Sbjct: 861  KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNS 919

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +++G CK G +++A  +  E  + G+    VT+  L+D + K G M  A+ +   ML  G
Sbjct: 920  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              P +VTF+ L++G+C +G L  G KL + M  K ++PN  TF  L+   C  N L  A 
Sbjct: 980  LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               K +    + P    Y  ++ G C A N+ EA  +  EM+ K       T+++LI G 
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099

Query: 518  CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
              + + VEA  IF++M R G A D    +       KG  P+
Sbjct: 1100 FKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPD 1141



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 71/172 (41%)

Query: 152  LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
            LN    TY  +M + C+ G  D  Q +   M   G  P        ++     G  +  +
Sbjct: 945  LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1004

Query: 212  GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             LL+      +  +   +N L+     +NN   A  ++K+      +PD  T+  L++G 
Sbjct: 1005 KLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGH 1064

Query: 272  SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
                 +K+A+  F +M   G S  + TY+ LI G  +  +     E+  +++
Sbjct: 1065 CNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 216/412 (52%), Gaps = 6/412 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++++LC+    D+   +F  M + G  P++      VSS  +AGK D A+ L  +F
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +P     S  +YN+L++ + K+   + A+ +  E       P+  +++ +I  L   G V
Sbjct: 241 KP-----SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M   GC  +I T+  LI G     ++    +L K +  +    P+VV Y +
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWK-LMIQDGCEPNVVAYNT 354

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  G +++A  + ++M   G  P+  T+++LIDGF K G++V A     RM+S G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT++ ++D  C+N   +Q   L ++M  +  +PN  TF   I  LC   R+  A 
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L++++ +  +P    YN ++D   +    +EA  +  E+E +  +P+ VT+  ++ G 
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
              G M EA+ +F K L  G APD IT N++I    K G    A ++++R S
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVS 586



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 227/495 (45%), Gaps = 55/495 (11%)

Query: 124 LNSLEVIKRLD---NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL---CEMGLHDSVQV 177
           L   +V+KRL    N    L F      + +  H+  TY +++  L   CEM   D VQ 
Sbjct: 39  LQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEM---DMVQY 95

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM--STFMYNSLLNA 235
           +   M+ DG      +    ++   R G  + A  +   +R GE     +  +YN LL+A
Sbjct: 96  ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF--YRIGEFGCKPTVRIYNHLLDA 153

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L+ +N       ++    +    P+ +T+NIL++ L +   V  A + F +M + GC PD
Sbjct: 154 LLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPD 213

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
            VTY T++S LC+  ++    EL         F P V  Y ++I G CK G+++ A  + 
Sbjct: 214 AVTYTTMVSSLCKAGKIDDAREL------AGRFKPSVPVYNALIDGMCKEGRIEVAIKLL 267

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGN-------------------------MVSAEYMR 390
            EM   G+ P+ V+++ +I+     GN                         ++   +MR
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327

Query: 391 ER----------MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
            +          M+  G  P+VV +++LI G C NG L + L++CD+M+     PNV T+
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           +ILI+   K   L  A     ++  +   P    Y  ++D  CK    D+AN +V +M  
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           + C P+ +TF   I G C  GR+  A+ +  +M   GC P+  T N L+  L +     E
Sbjct: 448 EGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507

Query: 561 AFRIMQRASEDQNLQ 575
           AF + Q   E +NLQ
Sbjct: 508 AFGLFQEI-EARNLQ 521



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 37/361 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ ++ SLC  G  +    +F  M   G   N       +  C   GK   A  L    
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+L++ L    + +EA+ +  +  R    P+  T++ILI G ++ G++
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 278 KKAFEFFYDMGSFGCSPDIVTY-----------------------------------NTL 302
             A E +  M S GC P++VTY                                   NT 
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTF 460

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I GLC    V    +LL+ ++      P++ TY  ++    ++ K ++A G++ E+ +  
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCL-PNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++P+ VT+N ++ GF + G M  A  +  + L  G  PD +T++++I  YC+ G++    
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAA 579

Query: 423 KLCDEMKG-KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           +L + +   K   P++ T+T LI   C    + +A  FL +     + P    +N ++  
Sbjct: 580 QLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRC 639

Query: 482 F 482
           F
Sbjct: 640 F 640



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 4/228 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+  + D    + + M  +G  PN+     F+      G+ + A  LL + 
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      +   YN LL+AL + N  +EA  +F+E      QP+  T+N ++ G SR G +
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F      G +PD +TYNT+I   C+  +V    +L++ V    E+ PD++TYTS
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI----DGFGKVG 381
           +I G C    +++A    ++  + GI P+  T+N L+    D  G +G
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 213/431 (49%), Gaps = 4/431 (0%)

Query: 133 LDNPKLGLK-FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           LD  K+ LK F+EF  V +  N +  +YN++  SLC++G       +   M   G +P+ 
Sbjct: 231 LDGIKIALKVFVEFPEVGVCWNTA--SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDV 288

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 ++   + G+      L+ + +   +  + + YN ++  L K     EA  + +E
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                  PD   +  LI G  ++G V  A+  F +M     SPD +TY  +I GLC+   
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           V    +L  E+  K    PD VTYT++I GYCK GKM +A  ++N+M   G+ P+ VT+ 
Sbjct: 409 VMEADKLFHEMVCK-RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYT 467

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L DG  K G + +A  +   M   G   ++ T++SL++G C+ G ++Q +KL  +M+  
Sbjct: 468 ALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 527

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              P+  T+T L++A CK   +  A   L+Q+   +L P    +N +++GFC +G +++ 
Sbjct: 528 GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDG 587

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++  M EK   P+  T+  LI  +C++  M     I+  M   G  PD  T N LI  
Sbjct: 588 EKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG 647

Query: 552 LLKGGMPNEAF 562
             K     EA+
Sbjct: 648 HCKARNMKEAW 658



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 212/413 (51%), Gaps = 6/413 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS- 215
           + +++  + L E G+ D  + +FD M + G L +      F+S    +   D  K  L  
Sbjct: 183 RVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHL--SEDLDGIKIALKV 240

Query: 216 --QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +F    V  +T  YN + ++L +     EA  +  +       PD  +++ +I G  +
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +GE+++  +   +M   G  P+  TYN +I  LC+  +VA    +L+E+      +PD V
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM-ISEGIAPDGV 359

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            YT++I G+CKLG +  A  +++EM    I P  +T+  +I G  + G ++ A+ +   M
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +     PD VT+++LIDGYC+ G++ +   L ++M    L+PN+ T+T L + LCK   +
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A   L ++    L    + YN +++G CKAGN+D+A  ++ +ME     PD VT+T L
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  +C    MV A  +  +ML     P  +T N L++     GM  +  ++++
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 592



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 184/384 (47%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+  LC+ G     + V   M S+G  P+  +    +    + G   +A  L  + 
Sbjct: 325 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 384

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +  +++     Y +++  L +     EA  +F E      +PD  T+  LI G  + G++
Sbjct: 385 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 444

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+AF     M   G +P+IVTY  L  GLC+  EV   +ELL E+  K     ++ TY S
Sbjct: 445 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG-LELNIYTYNS 503

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK G +D+A  +  +M   G  P AVT+  L+D + K   MV A  +  +ML   
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVTF+ L++G+C +G L  G KL   M  K + PN  T+  LI   C  N +    
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +    +VP    YN +I G CKA N+ EA  +  +M  K       ++  LI G 
Sbjct: 624 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 683

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
             + + +EA  +F +M R G   D
Sbjct: 684 YKRKKFLEARELFEQMRREGLVAD 707



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 1/325 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F TY  V+  LC+ G       +F  M      P+       +    + GK   A  L +
Sbjct: 393 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 452

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           Q     +T +   Y +L + L K    D A  +  E  R   + + +T+N L+ GL + G
Sbjct: 453 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 512

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + +A +   DM   G  PD VTY TL+   C+  E+ R HELL+++    E  P VVT+
Sbjct: 513 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM-LDRELQPTVVTF 571

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +++G+C  G ++    +   M   GI P+A T+N LI  +    NM +   +   M +
Sbjct: 572 NVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCA 631

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G +PD  T++ LI G+C+   + +   L  +M GK  +  V ++  LI    K  +  +
Sbjct: 632 KGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 691

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVID 480
           AR   +Q++   LV    +YN   D
Sbjct: 692 ARELFEQMRREGLVADREIYNIFAD 716


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 216/412 (52%), Gaps = 6/412 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++++LC+    D+   +F  M + G  P++      VSS  +AGK D A+ L  +F
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +P     S  +YN+L++ + K+   + A+ +  E       P+  +++ +I  L   G V
Sbjct: 241 KP-----SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNV 295

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M   GC  +I T+  LI G     ++    +L K +  +    P+VV Y +
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWK-LMIQDGCEPNVVAYNT 354

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  G +++A  + ++M   G  P+  T+++LIDGF K G++V A     RM+S G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT++ ++D  C+N   +Q   L ++M  +  +PN  TF   I  LC   R+  A 
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L++++ +  +P    YN ++D   +    +EA  +  E+E +  +P+ VT+  ++ G 
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
              G M EA+ +F K L  G APD IT N++I    K G    A ++++R S
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVS 586



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 227/495 (45%), Gaps = 55/495 (11%)

Query: 124 LNSLEVIKRLD---NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL---CEMGLHDSVQV 177
           L   +V+KRL    N    L F      + +  H+  TY +++  L   CEM   D VQ 
Sbjct: 39  LQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEM---DMVQY 95

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM--STFMYNSLLNA 235
           +   M+ DG      +    ++   R G  + A  +   +R GE     +  +YN LL+A
Sbjct: 96  ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF--YRIGEFGCKPTVRIYNHLLDA 153

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L+ +N       ++    +    P+ +T+NIL++ L +   V  A + F +M + GC PD
Sbjct: 154 LLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPD 213

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
            VTY T++S LC+  ++    EL         F P V  Y ++I G CK G+++ A  + 
Sbjct: 214 AVTYTTMVSSLCKAGKIDDAREL------AGRFKPSVPVYNALIDGMCKEGRIEVAIKLL 267

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGN-------------------------MVSAEYMR 390
            EM   G+ P+ V+++ +I+     GN                         ++   +MR
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327

Query: 391 ER----------MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
            +          M+  G  P+VV +++LI G C NG L + L++CD+M+     PNV T+
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           +ILI+   K   L  A     ++  +   P    Y  ++D  CK    D+AN +V +M  
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           + C P+ +TF   I G C  GR+  A+ +  +M   GC P+  T N L+  L +     E
Sbjct: 448 EGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507

Query: 561 AFRIMQRASEDQNLQ 575
           AF + Q   E +NLQ
Sbjct: 508 AFGLFQEI-EARNLQ 521



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 37/361 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ ++ SLC  G  +    +F  M   G   N       +  C   GK   A  L    
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+L++ L    + +EA+ +  +  R    P+  T++ILI G ++ G++
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDL 400

Query: 278 KKAFEFFYDMGSFGCSPDIVTY-----------------------------------NTL 302
             A E +  M S GC P++VTY                                   NT 
Sbjct: 401 VGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTF 460

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I GLC    V    +LL+ ++      P++ TY  ++    ++ K ++A G++ E+ +  
Sbjct: 461 IKGLCGNGRVEWAMKLLERMQGHGCL-PNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++P+ VT+N ++ GF + G M  A  +  + L  G  PD +T++++I  YC+ G++    
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAA 579

Query: 423 KLCDEMKG-KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           +L + +   K   P++ T+T LI   C    + +A  FL +     + P    +N ++  
Sbjct: 580 QLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRC 639

Query: 482 F 482
           F
Sbjct: 640 F 640



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 4/228 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+  + D    + + M  +G  PN+     F+      G+ + A  LL + 
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERM 480

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      +   YN LL+AL + N  +EA  +F+E      QP+  T+N ++ G SR G +
Sbjct: 481 QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMM 540

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F      G +PD +TYNT+I   C+  +V    +L++ V    E+ PD++TYTS
Sbjct: 541 GEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTS 600

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI----DGFGKVG 381
           +I G C    +++A    ++  + GI P+  T+N L+    D  G +G
Sbjct: 601 LIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMG 648


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 260/533 (48%), Gaps = 38/533 (7%)

Query: 68  HFHGLANGGSRPFDEKEVNYRC--SNEFWFVKVVC---TLLLRSSYLSDTCAR------- 115
           +F+ LA+  S P   +EV  +   S+++ F++ V    T  L S+ L + C++       
Sbjct: 56  NFNSLASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDF 115

Query: 116 ------YLCEKLSPLNSLEVIKRLDNPKLGLKFLE------------------FSRVNLS 151
                 +  +  S   ++ ++ RL +PKL L+ L+                   SR  LS
Sbjct: 116 IHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLS 175

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +  S   ++L++R  CE+   D     F  M+  G +P        +S  ++  + + A 
Sbjct: 176 VKSSI-VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 234

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L ++     ++ + + +N ++N L K+    +A         L  +P+  ++N +I G 
Sbjct: 235 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 294

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           S  G ++ A      M   G  PD  TY +LISG+C+   +     L  ++  +    P+
Sbjct: 295 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPN 353

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VTY ++I GYC  G +++A    +EM   GI PS  T+N+L+      G M  A+ M +
Sbjct: 354 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 413

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M   G +PD +T++ LI+GY R G   +   L +EM  K + P   T+T LI  L + N
Sbjct: 414 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 473

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+ +A    +++    + P   M+N ++DG C  GNV+ A +++ EM+ K   PD+VTF 
Sbjct: 474 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFN 533

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            L+ G C +G++ EA  + ++M R G  PD I+ N+LIS   + G   +AFR+
Sbjct: 534 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 586



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 201/400 (50%), Gaps = 1/400 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L ++ +  T+N+++  LC+ G     +    +M   G  PN       +      G  + 
Sbjct: 243 LRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEG 302

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+ +L   R   +   ++ Y SL++ + K+   +EA  +F +   +   P+  T+N LI 
Sbjct: 303 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 362

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G    G++++AF +  +M   G  P + TYN L+  L     +    +++KE++ K    
Sbjct: 363 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGII 421

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD +TY  +I+GY + G   KA  ++NEM S GI+P+ VT+  LI    +   M  A+ +
Sbjct: 422 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 481

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E++L  G  PDV+ F++++DG+C NG + +   L  EM  K++ P+  TF  L+   C+
Sbjct: 482 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 541

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E ++ +AR  L ++K   + P    YN +I G+ + G++ +A  +  EM      P  +T
Sbjct: 542 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 601

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +  LI   C       A  +  +M+  G +PDD T  SLI
Sbjct: 602 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 641



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 183/345 (53%), Gaps = 7/345 (2%)

Query: 225 STFMYNSLLNALVKQNNADEAV---YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           S+ +++ L+    +   ADEA    YM KE   +   P   T N ++    ++  ++ A+
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV---PKIETCNDMLSLFLKLNRMEMAW 234

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             + +M     S  + T+N +++ LC+  ++ +  E +  ++    F P+VV+Y ++I G
Sbjct: 235 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG-FKPNVVSYNTIIHG 293

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           Y   G ++ A  I + M   GI+P + T+  LI G  K G +  A  + ++M+  G +P+
Sbjct: 294 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPN 353

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            VT+++LIDGYC  G L +     DEM  K + P+V T+ +L++AL  E R+ +A   +K
Sbjct: 354 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 413

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           +++   ++P    YN +I+G+ + GN  +A  +  EM  K  +P  VT+T LI     + 
Sbjct: 414 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 473

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           RM EA  +F K+L  G +PD I  N+++      G    AF +++
Sbjct: 474 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 160/332 (48%), Gaps = 4/332 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  +C+ G  +    +FD M   G +PN+      +      G  + A     + 
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 380

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   YN L++AL  +    EA  M KE  +    PD  T+NILI G SR G  
Sbjct: 381 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 440

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           KKAF+   +M S G  P  VTY +LI  L R N +    +L +++      SPDV+ + +
Sbjct: 441 KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI-LDQGVSPDVIMFNA 499

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+C  G +++A  +  EM+   + P  VTFN L+ G  + G +  A  + + M   G
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +++++LI GY R G +    ++ DEM     +P + T+  LI  LCK    + A 
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 619

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
             LK++    + P    Y  +I+G    GNVD
Sbjct: 620 ELLKEMVNKGISPDDSTYLSLIEGM---GNVD 648



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 1/227 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++      G       + + M S G  P        +    R  +   A  L  + 
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+    M+N++++      N + A  + KE  R    PD  TFN L+QG  R G+V
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 545

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     +M   G  PD ++YNTLISG  R  ++     +  E+     F+P ++TY +
Sbjct: 546 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM-LSIGFNPTLLTYNA 604

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +I   CK  + D A  +  EM + GI P   T+  LI+G G V  +V
Sbjct: 605 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 651



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 75/168 (44%)

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           + F  L+   C   + ++  K    MK K + P + T   +++   K NR+  A     +
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    +    + +N +++  CK G + +A   +  ME    KP+ V++  +I G+  +G 
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  A  I + M   G  PD  T  SLIS + K G   EA  +  +  E
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 347


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 260/533 (48%), Gaps = 38/533 (7%)

Query: 68  HFHGLANGGSRPFDEKEVNYRC--SNEFWFVKVVC---TLLLRSSYLSDTCAR------- 115
           +F+ LA+  S P   +EV  +   S+++ F++ V    T  L S+ L + C++       
Sbjct: 34  NFNSLASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDF 93

Query: 116 ------YLCEKLSPLNSLEVIKRLDNPKLGLKFLE------------------FSRVNLS 151
                 +  +  S   ++ ++ RL +PKL L+ L+                   SR  LS
Sbjct: 94  IHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLS 153

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +  S   ++L++R  CE+   D     F  M+  G +P        +S  ++  + + A 
Sbjct: 154 VKSSI-VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 212

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L ++     ++ + + +N ++N L K+    +A         L  +P+  ++N +I G 
Sbjct: 213 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 272

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           S  G ++ A      M   G  PD  TY +LISG+C+   +     L  ++  +    P+
Sbjct: 273 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPN 331

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VTY ++I GYC  G +++A    +EM   GI PS  T+N+L+      G M  A+ M +
Sbjct: 332 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 391

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M   G +PD +T++ LI+GY R G   +   L +EM  K + P   T+T LI  L + N
Sbjct: 392 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 451

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+ +A    +++    + P   M+N ++DG C  GNV+ A +++ EM+ K   PD+VTF 
Sbjct: 452 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFN 511

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            L+ G C +G++ EA  + ++M R G  PD I+ N+LIS   + G   +AFR+
Sbjct: 512 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 564



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 201/400 (50%), Gaps = 1/400 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L ++ +  T+N+++  LC+ G     +    +M   G  PN       +      G  + 
Sbjct: 221 LRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEG 280

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+ +L   R   +   ++ Y SL++ + K+   +EA  +F +   +   P+  T+N LI 
Sbjct: 281 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 340

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G    G++++AF +  +M   G  P + TYN L+  L     +    +++KE++ K    
Sbjct: 341 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGII 399

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD +TY  +I+GY + G   KA  ++NEM S GI+P+ VT+  LI    +   M  A+ +
Sbjct: 400 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 459

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E++L  G  PDV+ F++++DG+C NG + +   L  EM  K++ P+  TF  L+   C+
Sbjct: 460 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 519

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E ++ +AR  L ++K   + P    YN +I G+ + G++ +A  +  EM      P  +T
Sbjct: 520 EGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLT 579

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +  LI   C       A  +  +M+  G +PDD T  SLI
Sbjct: 580 YNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 619



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 183/345 (53%), Gaps = 7/345 (2%)

Query: 225 STFMYNSLLNALVKQNNADEAV---YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           S+ +++ L+    +   ADEA    YM KE   +   P   T N ++    ++  ++ A+
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV---PKIETCNDMLSLFLKLNRMEMAW 212

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             + +M     S  + T+N +++ LC+  ++ +  E +  ++    F P+VV+Y ++I G
Sbjct: 213 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG-FKPNVVSYNTIIHG 271

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           Y   G ++ A  I + M   GI+P + T+  LI G  K G +  A  + ++M+  G +P+
Sbjct: 272 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPN 331

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            VT+++LIDGYC  G L +     DEM  K + P+V T+ +L++AL  E R+ +A   +K
Sbjct: 332 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 391

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           +++   ++P    YN +I+G+ + GN  +A  +  EM  K  +P  VT+T LI     + 
Sbjct: 392 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 451

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           RM EA  +F K+L  G +PD I  N+++      G    AF +++
Sbjct: 452 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 496



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 160/332 (48%), Gaps = 4/332 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  +C+ G  +    +FD M   G +PN+      +      G  + A     + 
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 358

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   YN L++AL  +    EA  M KE  +    PD  T+NILI G SR G  
Sbjct: 359 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 418

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           KKAF+   +M S G  P  VTY +LI  L R N +    +L +++      SPDV+ + +
Sbjct: 419 KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI-LDQGVSPDVIMFNA 477

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+C  G +++A  +  EM+   + P  VTFN L+ G  + G +  A  + + M   G
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +++++LI GY R G +    ++ DEM     +P + T+  LI  LCK    + A 
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 597

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
             LK++    + P    Y  +I+G    GNVD
Sbjct: 598 ELLKEMVNKGISPDDSTYLSLIEGM---GNVD 626



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 1/227 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++      G       + + M S G  P        +    R  +   A  L  + 
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+    M+N++++      N + A  + KE  R    PD  TFN L+QG  R G+V
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 523

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     +M   G  PD ++YNTLISG  R  ++     +  E+     F+P ++TY +
Sbjct: 524 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM-LSIGFNPTLLTYNA 582

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +I   CK  + D A  +  EM + GI P   T+  LI+G G V  +V
Sbjct: 583 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 629



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 75/168 (44%)

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           + F  L+   C   + ++  K    MK K + P + T   +++   K NR+  A     +
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    +    + +N +++  CK G + +A   +  ME    KP+ V++  +I G+  +G 
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  A  I + M   G  PD  T  SLIS + K G   EA  +  +  E
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 325


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 243/470 (51%), Gaps = 27/470 (5%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           L   +S     +V++ + +P    +F  ++  N    H  ++Y +++  L   G + ++ 
Sbjct: 21  LSPSISKTTFFQVLRFIASPPKAFEFFNWASRN-GFAHDSRSYFMMLDIL---GRNGNLN 76

Query: 177 VVFDYM-----RSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTF 227
           +  +++     RS+G +    + + F ++ +R    AG  + A  L S  +   V+ S  
Sbjct: 77  IARNFLFSIERRSNGSVK---IEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVI 133

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
            +NSLL  L+K+   + A  +F E    Y   PDT+TFNILI+G  +   V + F FF +
Sbjct: 134 TFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKE 193

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYTSVISGYCKL 345
           M  F C PD+VTYNTL+ GLCR  +V   H ++K  VK   + SPDVVTYT+++ GYC  
Sbjct: 194 MSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMK 253

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS-AEYMRERMLSFGYLPDVVT 404
            ++D+A  ++ EM S G+KP+ +T+N LI G  +V       E +   +   G++PD  T
Sbjct: 254 QEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCT 313

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++L++  C  G  ++ LK+  +MK   + P+  T+++LI  LC+      A +   +L 
Sbjct: 314 YNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLS 373

Query: 465 WNDLV-------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             D++       P    YNP+ D  CK G   +A  +  ++ +K  + D  ++  LIIGH
Sbjct: 374 DEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGH 432

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +G       +   MLR    PD  T   LI+  L+ G P  A++ ++R
Sbjct: 433 CKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLER 482



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 164/333 (49%), Gaps = 18/333 (5%)

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           N L++     G   +A + F  M S G SP ++T+N+L+  L +       H +  E+  
Sbjct: 101 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 160

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG--- 381
               +PD  T+  +I G+CK   +D+    + EM+    +P  VT+N L+DG  + G   
Sbjct: 161 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 220

Query: 382 ---NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
              N+V     + + LS    PDVVT+++L+ GYC   ++++ L + +EM  + L PN  
Sbjct: 221 IAHNVVKGMVKKMKDLS----PDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDI 276

Query: 439 TFTILINALCKENRLNDARRFL-KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           T+  LI  LC+  + +  +  L   +     VP    YN +++  C AGN DEA  +  +
Sbjct: 277 TYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKK 336

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK------MLR-IGCAPDDITVNSLIS 550
           M+E + +PD  T+++LI   C +G    A  +F+K      +LR  GC P     N +  
Sbjct: 337 MKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFD 396

Query: 551 CLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
            L K G  ++A R+ ++  +      PS+K  +
Sbjct: 397 FLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLI 429



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 20/329 (6%)

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           L+S   + +     Q L  I    KAFEFF      G + D  +Y  ++  L R   +  
Sbjct: 18  LFSLSPSISKTTFFQVLRFIASPPKAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNI 77

Query: 315 GHELLKEVKFKSEFSPDVVTY--TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               L  ++ +S  S  +      +++  Y   G  ++A  +++ M S G+ PS +TFN 
Sbjct: 78  ARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNS 137

Query: 373 LIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           L+    K G    A  + + M  ++G  PD  TF+ LI G+C+N  +++G +   EM   
Sbjct: 138 LLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRF 197

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVD 489
           N  P+V T+  L++ LC+  ++  A   +K +  K  DL P    Y  ++ G+C    +D
Sbjct: 198 NCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEID 257

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI--------GCAPD 541
           EA V+  EM  +  KP+ +T+  LI G C        +  F+K+  I        G  PD
Sbjct: 258 EALVVFEEMVSRGLKPNDITYNTLIKGLC-------EVQKFDKIKEILGGAVGGRGFVPD 310

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
             T N+L++     G  +EA ++ ++  E
Sbjct: 311 TCTYNTLMNAQCDAGNFDEALKMFKKMKE 339



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 126/563 (22%), Positives = 216/563 (38%), Gaps = 115/563 (20%)

Query: 127 LEVIKRLDNPKLGLKFLEFS---RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           L+++ R  N  +   FL FS   R N S+    +  N ++RS    GL +    +F  M+
Sbjct: 66  LDILGRNGNLNIARNFL-FSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMK 124

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-RPGEVTMSTFMYNSLLNALVKQNNA 242
           S G  P+       +   ++ G+ + A  +  +      VT  T+ +N L+    K +  
Sbjct: 125 SSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMV 184

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG--------------------------- 275
           DE    FKE  R   +PD  T+N L+ GL R G                           
Sbjct: 185 DEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYT 244

Query: 276 ----------EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
                     E+ +A   F +M S G  P+ +TYNTLI GLC V +  +  E+L      
Sbjct: 245 TLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGG 304

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             F PD  TY ++++  C  G  D+A  ++ +M    ++P + T++VLI    + G+   
Sbjct: 305 RGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFER 364

Query: 386 AEYMRERM--------------LSFGYLP---------------------------DVVT 404
           AE + +++              L   Y P                           D  +
Sbjct: 365 AEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPS 424

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           + +LI G+C+ G    G KL   M  ++  P+  T+ +LIN   ++     A + L+++ 
Sbjct: 425 YKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERML 484

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD------------------ 506
            +  +PK  +++ ++    K     E+   V  M +++ + +                  
Sbjct: 485 KSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRI 544

Query: 507 --------------KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                          V    LI   C  G++++A  + +  L  G   D    N +I  L
Sbjct: 545 KAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGL 604

Query: 553 LKGGMPNEAFRIMQRASEDQNLQ 575
            K   P EAF +     E  N Q
Sbjct: 605 CKMKRPLEAFGLYYMLVEKSNHQ 627



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 179/425 (42%), Gaps = 13/425 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++R  C     D   VVF+ M S G  PN       +       K D  K +L   
Sbjct: 242 TYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGA 301

Query: 218 RPGE-VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
             G      T  YN+L+NA     N DEA+ MFK+   L  QPD+ T+++LI+ L + G+
Sbjct: 302 VGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGD 361

Query: 277 VKKAFEFFYDMGSF-------GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            ++A + F  +          GC+P +  YN +   LC+  +  +   + +++  K   +
Sbjct: 362 FERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG--T 419

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            D  +Y ++I G+CK G  +    +   M      P   T+ +LI+GF + G  + A   
Sbjct: 420 QDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKT 479

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ERML   YLP    F S++    +N    +       M  + +  N+   T  +  L  
Sbjct: 480 LERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFG 539

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
                 A + ++ L  N  +        +I   C+ G + +A  +++   EK    D   
Sbjct: 540 SGLRIKAFQIVELLYDNGYMVD---MEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINV 596

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
             ++I G C   R +EA  ++  ++          +  L + L  GG   EA  + +R  
Sbjct: 597 CNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGRSEEAKFVSKRMP 656

Query: 570 EDQNL 574
           +++ L
Sbjct: 657 DERQL 661


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 210/420 (50%), Gaps = 8/420 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+  LC+ G ++  + VF  M   G  P+S      +    + G     + + S  
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R  +V      ++S+++   +  N D+A+  F         PD   + ILIQG  R G +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M   GC+ D+VTYNT++ GLC+   +    +L  E+  ++ F PD  T T 
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTI 485

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CKLG +  A  ++ +M    I+   VT+N L+DGFGKVG++ +A+ +   M+S  
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP  +++S L++  C  G L +  ++ DEM  KN+ P V     +I   C+    +D  
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR--CKPDKVTFTILII 515
            FL+++     VP    YN +I GF +  N+ +A  +V +MEE++    PD  T+  ++ 
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           G C + +M EA  +  KM+  G  PD  T   +I+  +      EAFRI      D+ LQ
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI-----HDEMLQ 720



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 244/547 (44%), Gaps = 72/547 (13%)

Query: 79  PFDEKEVNYRCSNE------------FWF---------VKVVCTLLLRSSYLSD--TCAR 115
           P    EV YRC N+            F F         +  +  +L+RS  LSD  +C  
Sbjct: 78  PLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLL 137

Query: 116 YLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
            +  + S ++ LE++  LD+         FS  N   N S   ++L++R+  +       
Sbjct: 138 RMIRR-SGVSRLEIVNSLDST--------FS--NCGSNDS--VFDLLIRTYVQARKLREA 184

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
              F  +RS G   +       + S +R G  + A G+  +     V ++ +  N ++NA
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA 244

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L K    ++      +       PD  T+N LI   S  G +++AFE    M   G SP 
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL---------- 345
           + TYNT+I+GLC+  +  R  E+  E+  +S  SPD  TY S++   CK           
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363

Query: 346 -------------------------GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
                                    G +DKA   +N +   G+ P  V + +LI G+ + 
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  +R  ML  G   DVVT+++++ G C+   L +  KL +EM  + L P+ YT 
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           TILI+  CK   L +A    +++K   +      YN ++DGF K G++D A  I A+M  
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K   P  ++++IL+   C KG + EA  ++++M+     P  +  NS+I    + G  ++
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603

Query: 561 AFRIMQR 567
               +++
Sbjct: 604 GESFLEK 610



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 207/436 (47%), Gaps = 3/436 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           + E SR  + +N    T N+++ +LC+ G  + V      ++  G  P+       +S+ 
Sbjct: 223 YQEISRSGVGIN--VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G  + A  L++       +   + YN+++N L K    + A  +F E  R    PD+
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+  L+    + G+V +  + F DM S    PD+V +++++S   R   + +       
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           VK ++   PD V YT +I GYC+ G +  A  + NEM   G     VT+N ++ G  K  
Sbjct: 401 VK-EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ +   M      PD  T + LIDG+C+ G L   ++L  +MK K +  +V T+ 
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L++   K   ++ A+     +   +++P P  Y+ +++  C  G++ EA  +  EM  K
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             KP  +    +I G+C  G   +  S   KM+  G  PD I+ N+LI   ++    ++A
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639

Query: 562 FRIMQRASEDQNLQLP 577
           F ++++  E+Q   +P
Sbjct: 640 FGLVKKMEEEQGGLVP 655



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 164/308 (53%), Gaps = 1/308 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            F++LI+   +  ++++A E F  + S G +  I   N LI  L R+  V     + +E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +S    +V T   +++  CK GKM+K     +++   G+ P  VT+N LI  +   G 
Sbjct: 227 S-RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  A  +   M   G+ P V T++++I+G C++G+  +  ++  EM    LSP+  T+  
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L+   CK+  + +  +    ++  D+VP    ++ ++  F ++GN+D+A +    ++E  
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD V +TILI G+C KG +  A+++ N+ML+ GCA D +T N+++  L K  M  EA 
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465

Query: 563 RIMQRASE 570
           ++    +E
Sbjct: 466 KLFNEMTE 473


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 216/451 (47%), Gaps = 36/451 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY + + SLC+ G       +   M+  G +PN       +S   R GK + A GL  + 
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +T  YN+L+N L  +   + A  +FK      S P T T+N +I+    +G++
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---------RVNEVARGHELLKEVKFKSEF 328
           +KA   F  M   G SP+++TYNTLI G C         R+ E+ +G+ L  +    +E 
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 329 -------------------------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                                    SP+ VTYT++I GY  L K+D A  ++ +M   G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            PS+ T+NV+I GF K  ++  AE    +M+  G LP+V+T++S IDG CRNG+     K
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDG 481
           +  EM+ +N  PN+YT++ LI  LC+E R  DA  +  L +L      P    Y  ++ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C  G   EA+ +V  M++K  +P +  +  L+IG C   ++  A++IF  M  +G    
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
                +LI  L K     EA  I Q   E  
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKH 759



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 201/399 (50%), Gaps = 4/399 (1%)

Query: 166 LCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           L ++G  D V +  D    M + G  P+       ++   + G+   AK ++S     + 
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
             + F Y SL+    + +N D A  MF    +    P++ T++ LI GL   G +++A +
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
              +M   G  P + TY   +  LC     +   ELL ++K K    P++ T+T++ISG 
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK-KRGCVPNIQTFTALISGL 352

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            + GK + A G+Y++M + G+ P+ VT+N LI+     G   +A  + + MLS G LP  
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPST 412

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
            T++ +I  +C  G + + + + D+M     SPNV T+  LI   CK+  LN+A R L+ 
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEI 472

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +K N L P  + Y  +I GF + G ++ A  +   M E    P+ VT+T +I G+    +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           + +A+++F KM+  G  P   T N +IS   K    +EA
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 202/424 (47%), Gaps = 9/424 (2%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +N  +  S  T+N ++  LC+ G     +++  ++      PN+      +    R    
Sbjct: 194 LNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNL 253

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  +  +        ++  Y++L+N L  +   +EA+ M +E  +   +P  +T+ I 
Sbjct: 254 DLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN--EVARG--HELLKEVK 323
           +  L   G   +A E    M   GC P+I T+  LISGL R    E+A G  H++L +  
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD-- 371

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P  VTY ++I+  C  G+ + A  I+  M S G  PS  T+N +I  F  +G++
Sbjct: 372 ---GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++ML  G  P+V+T+++LI GYC+ G LN  ++L + MKG  L P+ +T+T L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+   +  +L  A      +  + + P    Y  +IDG+     VD+A  +  +M E   
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P   T+ ++I G      + EA +   KM++ G  P+ IT  S I  L + G    AF+
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 564 IMQR 567
           I   
Sbjct: 609 IFHE 612



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 188/404 (46%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C     D    +FD M  DG  PNS      ++     G+ + A  +L + 
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + + Y   L +L     + EAV +  +  +    P+  TF  LI GLSR G+ 
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A   ++ M + G  P  VTYN LI+ LC          + K +       P   TY  
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL-PSTQTYNE 417

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +C +G + KA  I+++M   G  P+ +T+N LI G+ K GN+ +A  + E M   G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T++ LI G+ R G+L     L   M    +SPN  T+T +I+      +++DA 
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  +  +P    YN +I GF K  ++ EA     +M ++   P+ +T+T  I G 
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C  GR   A  IF++M +    P+  T +SLI  L + G   +A
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 174/381 (45%), Gaps = 4/381 (1%)

Query: 197 FVSSCIRAGK---CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
           F +  I+ GK    D A+ +  +     +  S   +N+++N L K+    EA  +    F
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           R  + P+ +T+  LI G  R   +  AF  F  M   GC P+ VTY+TLI+GLC    + 
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              ++L+E+  K    P V TYT  +   C  G   +A  +  +M   G  P+  TF  L
Sbjct: 290 EAMDMLEEMVQKG-IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G  + G    A  +  +ML+ G +P  VT+++LI+  C  G+      +   M     
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+  T+  +I   C    +  A     ++      P    YN +I G+CK GN++ A  
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++  M+    KPD  T+T LI G    G++  A S+F  M+  G +P+ +T  ++I    
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528

Query: 554 KGGMPNEAFRIMQRASEDQNL 574
                ++A  +  +  E  NL
Sbjct: 529 NLAKVDDALALFWKMVESGNL 549



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 157/304 (51%), Gaps = 1/304 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           +F  L+  L +   V  A + +  M + G  P ++T+NT+I+ LC+   V     ++  +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
            F+ +  P+  TYTS+I G+C+   +D A  +++ M   G  P++VT++ LI+G    G 
Sbjct: 229 -FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGR 287

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  M E M+  G  P V T++  +   C  G  ++ ++L  +MK +   PN+ TFT 
Sbjct: 288 LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+ L ++ +   A     ++  + LVP    YN +I+  C  G  + A  I   M    
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             P   T+  +I   C+ G + +A+ IF+KML+ G +P+ IT N+LI    K G  N A 
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 563 RIMQ 566
           R+++
Sbjct: 468 RLLE 471



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 134/256 (52%)

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           EV R  + L E+  K +F   + ++T+++    K   +D A  +Y +M + GI+PS +TF
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTF 205

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N +I+   K G +  A+ +   +  +   P+  T++SLI G+CRN  L+    + D M  
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVK 265

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
               PN  T++ LIN LC E RL +A   L+++    + P  + Y   +   C AG   E
Sbjct: 266 DGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSE 325

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  ++ +M+++ C P+  TFT LI G    G+   AI +++KML  G  P  +T N+LI+
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385

Query: 551 CLLKGGMPNEAFRIMQ 566
            L   G    AF I +
Sbjct: 386 QLCVEGRFETAFTIFK 401



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 176/431 (40%), Gaps = 79/431 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  ++   +F +M S G LP++      +      G    A  +  + 
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +   YN+L+    KQ N + A+ + +       +PD WT+  LI G SR G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 278 KKAFEFFYDMGSFGCSPDIVTY-----------------------------------NTL 302
           + A   FY M   G SP+ VTY                                   N +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ISG  + N ++       ++  K    P+V+TYTS I G C+ G+   A  I++EM    
Sbjct: 559 ISGFSKTNSISEAENFCGKM-VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEY--MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             P+  T++ LI G  + G    AE   +  R+  +G  P+V T+++L+ G C  G+  +
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 421 GLKLCDEMKGKNLSP----------------------NVY-------------TFTILIN 445
             +L   M+ K L P                      N++              +  LI 
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALIC 737

Query: 446 ALCKENRLNDARRFLKQL---KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           ALCKEN + +A+   + +    WN       ++  ++DG  K G  D    ++  ME + 
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNS---DEVVWTVLLDGLLKEGETDLCLKLLHVMESRN 794

Query: 503 CKPDKVTFTIL 513
           C  +  T+ +L
Sbjct: 795 CTLNFQTYVML 805



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 165/350 (47%), Gaps = 29/350 (8%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           MS F+  S+LN LV+               RL++  D     ++I+     GEVK+  +F
Sbjct: 111 MSCFV--SMLNRLVRD--------------RLFAPADHVRI-LMIKSCRNEGEVKRVTQF 153

Query: 284 F------YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                  YD G   CS     + TL+  L + + V    ++  ++   S   P ++T+ +
Sbjct: 154 LSEINSKYDFGYTLCS-----FTTLLIQLGKFDMVDLARDMYIKM-LNSGIRPSLLTFNT 207

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK G++ +A  I + +      P+A T+  LI G  +  N+  A  M +RM+  G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VT+S+LI+G C  G+L + + + +EM  K + P VYT+TI + +LC     ++A 
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++K    VP    +  +I G  + G  + A  +  +M      P  VT+  LI   
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C++GR   A +IF  ML  G  P   T N +I C    G   +A  I  +
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDK 437



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 5/300 (1%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +S NH   TY  ++     +   D    +F  M   G+LP+S      +S   +      
Sbjct: 513 ISPNHV--TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISE 570

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+    +     +  +   Y S ++ L +      A  +F E  +    P+ +T++ LI 
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630

Query: 270 GLSRIGEVKKA--FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           GL + G  + A  +     +  +GC P++ TY TL+ GLC         +L+  ++ K  
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQ-KKG 689

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P    Y +++ G CK  K++ A  I+  M++ G +     +  LI    K   +  A+
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQ 749

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + ML   +  D V ++ L+DG  + G+ +  LKL   M+ +N + N  T+ +L   L
Sbjct: 750 CIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/419 (32%), Positives = 209/419 (49%), Gaps = 8/419 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE-FFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++  LC+ G ++  + V D M   G  PN+       V SC +    +A +     
Sbjct: 296 TYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEM 355

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            + G V      ++S++    +      A+  F++   +   PDT  + ILI G  R  +
Sbjct: 356 LQRG-VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A +   +M   GC  D+VTYNTL++GLCR   +    EL KE+  +  F PD  T T
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF-PDFYTLT 473

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYCK G M KA  ++  M    +KP  VT+N L+DGF KVG M  A+ +   M+S 
Sbjct: 474 TLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR 533

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P  ++FS LI+G+C  G +++  +L DEMK K + P + T   +I    +   L+ A
Sbjct: 534 EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKA 593

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             FL  +    + P    YN +I+ F K  N D A  ++  MEE+   P+ VT+  ++ G
Sbjct: 594 NDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGG 653

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
               GRM EA  + +KM+  G  PD  T  SLI+  +      EAFR+      D+ LQ
Sbjct: 654 FSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRV-----HDEMLQ 707



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 203/413 (49%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++ +LC+ G  D+V V    M   G   +       V++  R G    A GL+   
Sbjct: 226 TLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM 285

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YN+L+N L K+ + + A  +  E   +   P+  TFN ++    R  +V
Sbjct: 286 AGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDV 345

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M   G  PD++++++++    R  E+ R     +++K      PD V YT 
Sbjct: 346 WEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK-GVGLVPDTVIYTI 404

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC+   +  A  + NEM   G     VT+N L++G  +   +  A+ + + M+  G
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T ++LI GYC++G + + L L + M  ++L P+V T+  L++  CK   +  A+
Sbjct: 465 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAK 524

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +   ++ P    ++ +I+GFC  G V EA  +  EM+EK  KP  VT   +I G+
Sbjct: 525 ELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGY 584

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              G + +A    N M+  G  PD IT N+LI+  +K    + AF ++    E
Sbjct: 585 LRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEE 637



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 191/369 (51%), Gaps = 1/369 (0%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           + +  + + ++A K           R     +S    N+LL A+VK    D A  +++++
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            +  +  + +T NI++  L + G++     +  +M   G   D+VTYNTL++  CR   V
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
           +    L+  +  K    P + TY ++I+G CK G  ++A  + +EM   G+ P+A TFN 
Sbjct: 276 SEAFGLVDCMAGKG-LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           ++    +  ++  AE +   ML  G +PD+++FSS++  + RNG+L + L   ++MKG  
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L P+   +TILIN  C+ + ++ A +   ++     V     YN +++G C+   +D+A+
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  EM E+   PD  T T LI G+C  G M +A+S+F  M      PD +T N+L+   
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514

Query: 553 LKGGMPNEA 561
            K G   +A
Sbjct: 515 CKVGEMEKA 523



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 152/308 (49%), Gaps = 1/308 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            F++LI+   +  ++++  E F  +   G    I   N L+  + +V  V    ++ ++ 
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             KS    +V T   +++  CK GK+D      +EM   G+    VT+N L++ + + G 
Sbjct: 216 -VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  + + M   G  P + T+++LI+G C+ G   +  ++ DEM G  L PN  TF  
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           ++   C++  + +A R   ++    +VP    ++ ++  F + G +  A     +M+   
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD V +TILI G+C    +  A+ + N+M+  GC  D +T N+L++ L +G M ++A 
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454

Query: 563 RIMQRASE 570
            + +   E
Sbjct: 455 ELFKEMVE 462



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 1/191 (0%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K L +  ++  +  S+ ++++++   C +GL      ++D M+  G  P        +  
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            +RAG    A   L+      V      YN+L+N+ VK+ N D A ++          P+
Sbjct: 584 YLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPN 643

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+N ++ G SR G +++A    + M   G +PD  TY +LI+G    + +     +  
Sbjct: 644 LVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHD 703

Query: 321 EVKFKSEFSPD 331
           E+  +  F PD
Sbjct: 704 EM-LQRGFVPD 713


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 216/451 (47%), Gaps = 36/451 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY + + SLC+ G       +   M+  G +PN       +S   R GK + A GL  + 
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +T  YN+L+N L  +   + A  +FK      S P T T+N +I+    +G++
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---------RVNEVARGHELLKEVKFKSEF 328
           +KA   F  M   G SP+++TYNTLI G C         R+ E+ +G+ L  +    +E 
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 329 -------------------------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                                    SP+ VTYT++I GY  L K+D A  ++ +M   G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            PS+ T+NV+I GF K  ++  AE    +M+  G LP+V+T++S IDG CRNG+     K
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDG 481
           +  EM+ +N  PN+YT++ LI  LC+E R  DA  +  L +L      P    Y  ++ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C  G   EA+ +V  M++K  +P +  +  L+IG C   ++  A++IF  M  +G    
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
                +LI  L K     EA  I Q   E  
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKH 759



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 201/399 (50%), Gaps = 4/399 (1%)

Query: 166 LCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           L ++G  D V +  D    M + G  P+       ++   + G+   AK ++S     + 
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDA 233

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
             + F Y SL+    + +N D A  MF    +    P++ T++ LI GL   G +++A +
Sbjct: 234 YPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMD 293

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
              +M   G  P + TY   +  LC     +   ELL ++K K    P++ T+T++ISG 
Sbjct: 294 MLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK-KRGCVPNIQTFTALISGL 352

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            + GK + A G+Y++M + G+ P+ VT+N LI+     G   +A  + + MLS G LP  
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPST 412

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
            T++ +I  +C  G + + + + D+M     SPNV T+  LI   CK+  LN+A R L+ 
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEI 472

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +K N L P  + Y  +I GF + G ++ A  +   M E    P+ VT+T +I G+    +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           + +A+++F KM+  G  P   T N +IS   K    +EA
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 202/424 (47%), Gaps = 9/424 (2%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +N  +  S  T+N ++  LC+ G     +++  ++      PN+      +    R    
Sbjct: 194 LNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNL 253

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  +  +        ++  Y++L+N L  +   +EA+ M +E  +   +P  +T+ I 
Sbjct: 254 DLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN--EVARG--HELLKEVK 323
           +  L   G   +A E    M   GC P+I T+  LISGL R    E+A G  H++L +  
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD-- 371

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P  VTY ++I+  C  G+ + A  I+  M S G  PS  T+N +I  F  +G++
Sbjct: 372 ---GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++ML  G  P+V+T+++LI GYC+ G LN  ++L + MKG  L P+ +T+T L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+   +  +L  A      +  + + P    Y  +IDG+     VD+A  +  +M E   
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P   T+ ++I G      + EA +   KM++ G  P+ IT  S I  L + G    AF+
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 564 IMQR 567
           I   
Sbjct: 609 IFHE 612



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 188/404 (46%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C     D    +FD M  DG  PNS      ++     G+ + A  +L + 
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + + Y   L +L     + EAV +  +  +    P+  TF  LI GLSR G+ 
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A   ++ M + G  P  VTYN LI+ LC          + K +       P   TY  
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL-PSTQTYNE 417

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +C +G + KA  I+++M   G  P+ +T+N LI G+ K GN+ +A  + E M   G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T++ LI G+ R G+L     L   M    +SPN  T+T +I+      +++DA 
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  +  +P    YN +I GF K  ++ EA     +M ++   P+ +T+T  I G 
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C  GR   A  IF++M +    P+  T +SLI  L + G   +A
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 174/381 (45%), Gaps = 4/381 (1%)

Query: 197 FVSSCIRAGK---CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
           F +  I+ GK    D A+ +  +     +  S   +N+++N L K+    EA  +    F
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           R  + P+ +T+  LI G  R   +  AF  F  M   GC P+ VTY+TLI+GLC    + 
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              ++L+E+  K    P V TYT  +   C  G   +A  +  +M   G  P+  TF  L
Sbjct: 290 EAMDMLEEMVQKG-IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G  + G    A  +  +ML+ G +P  VT+++LI+  C  G+      +   M     
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+  T+  +I   C    +  A     ++      P    YN +I G+CK GN++ A  
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++  M+    KPD  T+T LI G    G++  A S+F  M+  G +P+ +T  ++I    
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528

Query: 554 KGGMPNEAFRIMQRASEDQNL 574
                ++A  +  +  E  NL
Sbjct: 529 NLAKVDDALALFWKMVESGNL 549



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 157/304 (51%), Gaps = 1/304 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           +F  L+  L +   V  A + +  M + G  P ++T+NT+I+ LC+   V     ++  +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
            F+ +  P+  TYTS+I G+C+   +D A  +++ M   G  P++VT++ LI+G    G 
Sbjct: 229 -FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGR 287

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  M E M+  G  P V T++  +   C  G  ++ ++L  +MK +   PN+ TFT 
Sbjct: 288 LEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTA 347

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+ L ++ +   A     ++  + LVP    YN +I+  C  G  + A  I   M    
Sbjct: 348 LISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHG 407

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             P   T+  +I   C+ G + +A+ IF+KML+ G +P+ IT N+LI    K G  N A 
Sbjct: 408 SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAM 467

Query: 563 RIMQ 566
           R+++
Sbjct: 468 RLLE 471



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 134/256 (52%)

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           EV R  + L E+  K +F   + ++T+++    K   +D A  +Y +M + GI+PS +TF
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTF 205

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N +I+   K G +  A+ +   +  +   P+  T++SLI G+CRN  L+    + D M  
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVK 265

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
               PN  T++ LIN LC E RL +A   L+++    + P  + Y   +   C AG   E
Sbjct: 266 DGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSE 325

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  ++ +M+++ C P+  TFT LI G    G+   AI +++KML  G  P  +T N+LI+
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385

Query: 551 CLLKGGMPNEAFRIMQ 566
            L   G    AF I +
Sbjct: 386 QLCVEGRFETAFTIFK 401



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 175/431 (40%), Gaps = 79/431 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  ++   +F +M S G LP++      +      G    A  +  + 
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +   YN+L+    KQ N + A+ + +       +PD WT+  LI G SR G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 278 KKAFEFFYDMGSFGCSPDIVTY-----------------------------------NTL 302
           + A   FY M   G SP+ VTY                                   N +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ISG  + N ++       ++  K    P+V+TYTS I G C+ G+   A  I++EM    
Sbjct: 559 ISGFSKTNSISEAENFCGKM-VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEY--MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             P+  T++ LI G  + G    AE   +  R+  +G  P+V T+++L+ G C  G+  +
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYE 677

Query: 421 GLKLCDEMKGKNLSP----------------------NVY-------------TFTILIN 445
             +L   M+ K L P                      N++              +  LI 
Sbjct: 678 ADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALIC 737

Query: 446 ALCKENRLNDARRFLKQL---KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           ALCKEN + +A+   + +    WN        +  ++DG  K G  D    ++  ME + 
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNS---DEVAWTVLLDGLLKEGETDLCLKLLHVMESRN 794

Query: 503 CKPDKVTFTIL 513
           C  +  T+ +L
Sbjct: 795 CTLNFQTYVML 805



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 165/350 (47%), Gaps = 29/350 (8%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           MS F+  S+LN LV+               RL++  D     ++I+     GEVK+  +F
Sbjct: 111 MSCFV--SMLNRLVRD--------------RLFAPADHVRI-LMIKSCRNEGEVKRVTQF 153

Query: 284 F------YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                  YD G   CS     + TL+  L + + V    ++  ++   S   P ++T+ +
Sbjct: 154 LSEINSKYDFGYTLCS-----FTTLLIQLGKFDMVDLARDMYIKM-LNSGIRPSLLTFNT 207

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK G++ +A  I + +      P+A T+  LI G  +  N+  A  M +RM+  G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VT+S+LI+G C  G+L + + + +EM  K + P VYT+TI + +LC     ++A 
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++K    VP    +  +I G  + G  + A  +  +M      P  VT+  LI   
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C++GR   A +IF  ML  G  P   T N +I C    G   +A  I  +
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDK 437



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 5/300 (1%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +S NH   TY  ++     +   D    +F  M   G+LP+S      +S   +      
Sbjct: 513 ISPNHV--TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISE 570

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+    +     +  +   Y S ++ L +      A  +F E  +    P+ +T++ LI 
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630

Query: 270 GLSRIGEVKKA--FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           GL + G  + A  +     +  +GC P++ TY TL+ GLC         +L+  ++ K  
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQ-KKG 689

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P    Y +++ G CK  K++ A  I+  M++ G +     +  LI    K   +  A+
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQ 749

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + ML   +  D V ++ L+DG  + G+ +  LKL   M+ +N + N  T+ +L   L
Sbjct: 750 CIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 219/436 (50%), Gaps = 7/436 (1%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK--TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           ++G  F   +++ L L H     T+  ++R LC  G       +FD M  +G  PN    
Sbjct: 115 RVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTY 173

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G   AA  LL     G       +Y S++++L K     EA  +F +   
Sbjct: 174 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG 233

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PD +T+  L+  L  + E K        M +    PD+V ++T++  LC+  +V  
Sbjct: 234 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 293

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            HE++ ++  +    PDVVTYT+++ G+C   +MD+A  +++ M   G  P  +++  LI
Sbjct: 294 AHEIV-DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 352

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+ K+  +  A Y+ E M    ++PD  T+++L+ G C  G+L   + L  EM  +   
Sbjct: 353 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T++IL+++LCK   L +A   LK ++ ++L P   +YN +IDG C+AG ++ A  +
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + +  K   P   T+ I+I G C +G + EA  +F +M    C+PD  T N++    L+
Sbjct: 473 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 532

Query: 555 GGMPNEAFRIMQRASE 570
               NE  R +Q   E
Sbjct: 533 N---NETLRAIQLLEE 545



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 171/311 (54%), Gaps = 1/311 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D+A+  F     ++  P    F  L+  ++++            M SFG  P++ T 
Sbjct: 44  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 103

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N LI+  C +N V     +L ++  K    PD  T+T++I G C  GK+ +A  ++++M 
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 162

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P+ VT+  LI+G  KVGN  +A  +   M      PDVV ++S+ID  C++ Q+ 
Sbjct: 163 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 222

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L  +M G+ +SP+++T+T L++ALC           L Q+  + ++P   +++ V+
Sbjct: 223 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 282

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G V EA+ IV  M ++  +PD VT+T L+ GHC++  M EA+ +F+ M+R G A
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342

Query: 540 PDDITVNSLIS 550
           PD I+  +LI+
Sbjct: 343 PDVISYTTLIN 353



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 197/388 (50%), Gaps = 4/388 (1%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   +++F   ++S  +         L +Q     V  + +  N L+N+    N    A 
Sbjct: 61  PPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAF 120

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  +L  QPD  TF  LI+GL   G++ +A   F  M   G  P++VTY TLI+GL
Sbjct: 121 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 180

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+V   +    LL+ ++ +    PDVV YTS+I   CK  ++ +A  ++++M   GI P 
Sbjct: 181 CKVGNTSAAIRLLRSME-QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 239

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+  L+     +        +  +M++   LPDVV FS+++D  C+ G++ +  ++ D
Sbjct: 240 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M  + + P+V T+T L++  C ++ +++A +    +      P    Y  +I+G+CK  
Sbjct: 300 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIH 359

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +D+A  +  EM  K   PD  T+  L+ G C  GR+ +AI++F++M+  G  PD +T +
Sbjct: 360 KIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 419

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQNL 574
            L+  L K     EA  ++ +A E  NL
Sbjct: 420 ILLDSLCKNRHLEEAMALL-KAIEASNL 446



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 15/276 (5%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           +NTL   L   N +   H             P +V +  +++   K+        +  +M
Sbjct: 43  FNTLDDALSSFNRLLHMHP-----------PPSIVDFAKLLTSIAKMKHYSTVLSLSTQM 91

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
           +S G+ P+  T N+LI+ F  +  +  A  +  ++L  G+ PD  TF++LI G C  G++
Sbjct: 92  DSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI 151

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + L L D+M  +   PNV T+  LIN LCK    + A R L+ ++  +  P   +Y  +
Sbjct: 152 GEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI 211

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           ID  CK   V EA  + ++M  +   PD  T+T L+   C         ++ N+M+    
Sbjct: 212 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 271

Query: 539 APDDITVNSLISCLLKGGMPNEAFRI----MQRASE 570
            PD +  ++++  L K G   EA  I    +QR  E
Sbjct: 272 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 1/175 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           KTYN +M  LC +G       +F  M + G +P+       + S  +    + A  LL  
Sbjct: 381 KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA 440

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +     +YN +++ + +    + A  +F         P  WT+NI+I GL + G 
Sbjct: 441 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           + +A + F +M    CSPD  TYNT+  G  + NE  R  +LL+E+  +  FS D
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG-FSAD 554


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 209/407 (51%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            ++++++   E GL  +   VFD M   G +P+       +++ ++ G+   A  +  Q 
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    FM + ++NA  K    DEA    K+   L  +P+  T++ LI G   +G+V
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A      M   G S ++VTY  LI G C+  ++    ++L+ ++ ++   PD   Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+ GK+D A  + +EM   G+K +    N LI+G+ K G +  AE +  RM+ + 
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  ++++L+DGYCR G  ++   LCD+M  + + P V T+  L+  LC+    +DA 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    + P    Y+ ++DG  K  N + A+ +  ++  +     ++TF  +I G 
Sbjct: 458 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C  G+MVEA  IF+KM  +GC+PD IT  +LI    K     +AF++
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 2/385 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY L+++  C+    D  + V   M+ +  L P+       +    R GK D A  LL +
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  + F+ NSL+N   K+    EA  +         +PD++++N L+ G  R G 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +AF     M   G  P ++TYNTL+ GLCRV       ++   +  K   +PD V Y+
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW-HLMMKRGVAPDEVGYS 476

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G  K+   + A+ ++ ++ + G   S +TFN +I G  K+G MV AE + ++M   
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD +T+ +LIDGYC+   + Q  K+   M+ + +SP++  +  LI+ L K  RL + 
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 596

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L ++    L P    Y  +IDG+CK G +D+A     EM E     + +  + ++ G
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPD 541
               GR+ EA  +  KM+  G  PD
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 195/414 (47%), Gaps = 4/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++ LC +G  D    ++  M   G  P+       +    +    + A  L    
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T S   +N++++ L K     EA  +F +   L   PD  T+  LI G  +   V
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+    M     SP I  YN+LISGL +   +    +LL E+  +   +P++VTY +
Sbjct: 559 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG-LTPNIVTYGA 617

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK G +DKA   Y EM   G+  + +  + ++ G  ++G +  A  + ++M+  G
Sbjct: 618 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + PD   F   +    R   + +     DE     L PN   + I I  LCK  +++DAR
Sbjct: 678 FFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           RF   L     VP  F Y  +I G+  AGNVDEA  +  EM  +   P+ VT+  LI G 
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C    +  A  +F+K+ + G  P+ +T N+LI    K G  + AF++  +  E+
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 218/481 (45%), Gaps = 68/481 (14%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + Y +++   C  G  D    + D M   G   N  +    ++   + G+   A+G++++
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +   ++ YN+LL+   ++ +  EA  +  +  +   +P   T+N L++GL R+G 
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A + ++ M   G +PD V Y+TL+ GL ++        L K++  +  F+   +T+ 
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG-FTKSRITFN 511

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN-------------- 382
           ++ISG CK+GKM +A  I+++M   G  P  +T+  LIDG+ K  N              
Sbjct: 512 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE 571

Query: 383 -----------MVSAEYMRERMLSF----------GYLPDVVTFSSLIDGYCRNGQLNQG 421
                      ++S  +   R++            G  P++VT+ +LIDG+C+ G L++ 
Sbjct: 572 PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL------------------ 463
                EM    LS N+   + +++ L +  R+++A   ++++                  
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 691

Query: 464 -----KWND---------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
                K  D         L+P   +YN  I G CK G VD+A    + +  K   PD  T
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  LI G+   G + EA  + ++MLR G  P+ +T N+LI+ L K    + A R+  +  
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811

Query: 570 E 570
           +
Sbjct: 812 Q 812



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 190/399 (47%), Gaps = 4/399 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+MG     + +FD M+  G  P+       +    +A     A  +    
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ S  MYNSL++ L K     E   +  E       P+  T+  LI G  + G +
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF  +++M   G S +I+  +T++SGL R+  +   + L++++     F PD   +  
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM-VDHGFFPD---HEC 684

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +    +   + K     +E     + P+ + +N+ I G  K G +  A      +   G
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PD  T+ +LI GY   G +++  +L DEM  + L PN+ T+  LIN LCK   ++ A+
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R   +L    L P    YN +IDG+CK GN+D A  +  +M E+   P  VT++ LI G 
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C  G +  ++ + N+M++ G     I   +L+   ++ G
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 203/420 (48%), Gaps = 2/420 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL +  +  TY+ ++     +G  ++ + V  +M   G   N       +    +  K D
Sbjct: 254 NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 209 AAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            A+ +L   +    +      Y  L++   +    D+AV +  E  RL  + + +  N L
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 373

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  + GE+ +A      M  +   PD  +YNTL+ G CR    +    L  ++  +  
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM-LQEG 432

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P V+TY +++ G C++G  D A  I++ M   G+ P  V ++ L+DG  K+ N   A 
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 492

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + +L+ G+    +TF+++I G C+ G++ +  ++ D+MK    SP+  T+  LI+  
Sbjct: 493 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK + +  A +    ++   + P   MYN +I G  K+  + E   ++ EM  +   P+ 
Sbjct: 553 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 612

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+  LI G C +G + +A S + +M   G + + I  ++++S L + G  +EA  +MQ+
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 174/336 (51%), Gaps = 4/336 (1%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           E   S  +++ +L   V++     A+Y+F    +    P   + N L+  L + GE   A
Sbjct: 151 EFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
              +  M   G  PD+   + +++  C+  +V      +K+++      P++VTY S+I+
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLIN 269

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE-YMRERMLSFGYL 399
           GY  LG ++ A G+   M+  G+  + VT+ +LI G+ K   M  AE  +R        +
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD   +  LIDGYCR G+++  ++L DEM    L  N++    LIN  CK   +++A   
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389

Query: 460 L-KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           + + + WN L P  + YN ++DG+C+ G+  EA  +  +M ++  +P  +T+  L+ G C
Sbjct: 390 ITRMVDWN-LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             G   +A+ I++ M++ G APD++  ++L+  L K
Sbjct: 449 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFK 484



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 139/277 (50%), Gaps = 12/277 (4%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++  L  +G  D   ++   M   G  P+    E F+ S IR          L +     
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDH---ECFLKSDIRYAAIQKIADSLDESCKTF 709

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ----PDTWTFNILIQGLSRIGEV 277
           +  +  +YN  +  L K    D+A    + +F + S     PD +T+  LI G S  G V
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDA----RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNV 765

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF    +M   G  P+IVTYN LI+GLC+   V R   L  ++  K  F P+VVTY +
Sbjct: 766 DEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLF-PNVVTYNT 824

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK+G MD A  + ++M   GI PS VT++ LI+G  K G++  +  +  +M+  G
Sbjct: 825 LIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
               ++ + +L+ GY R+G++ +  KL D M  + LS
Sbjct: 885 VDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLS 921



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 140/276 (50%), Gaps = 5/276 (1%)

Query: 306 LCRVNEVARGHELLKE-VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           LC+  +  RG+ +  E V    EF+     +  ++  Y + G    A  +++ M  CG  
Sbjct: 131 LCKFKD--RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRI 188

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           PS  + N L++   K G   +A Y+ ++M+  G +PDV   S +++ +C++G++++    
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             +M+   + PN+ T+  LIN       +  A+  LK +    +      Y  +I G+CK
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308

Query: 485 AGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
              +DEA  ++  M EE    PD+  + +LI G+C  G++ +A+ + ++MLR+G   +  
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 368

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
             NSLI+   K G  +EA  ++ R   D NL+  S+
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMV-DWNLKPDSY 403



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 126/243 (51%), Gaps = 1/243 (0%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P + +  S+++   K G+   A  +Y +M   GI P     +++++ F K G +  A   
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M + G  P++VT+ SLI+GY   G +     +   M  K +S NV T+T+LI   CK
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308

Query: 450 ENRLNDARRFLKQLKWND-LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           + ++++A + L+ ++    LVP    Y  +IDG+C+ G +D+A  ++ EM     K +  
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 368

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
               LI G+C +G + EA  +  +M+     PD  + N+L+    + G  +EAF +  + 
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428

Query: 569 SED 571
            ++
Sbjct: 429 LQE 431



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 9/241 (3%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKT--------YNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           K  +++    ++  SL+ S KT        YN+ +  LC+ G  D  +  F  +   G +
Sbjct: 687 KSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFV 746

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++      +     AG  D A  L  +     +  +   YN+L+N L K  N D A  +
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F +  +    P+  T+N LI G  +IG +  AF+    M   G SP +VTY+ LI+GLC+
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             ++ R  +LL ++  K+     ++ Y +++ GY + G+M K   +Y+ M+   +  +A+
Sbjct: 867 HGDIERSMKLLNQM-IKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAI 925

Query: 369 T 369
           +
Sbjct: 926 S 926


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 223/436 (51%), Gaps = 8/436 (1%)

Query: 137 KLGLKFLEFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           +LG  F   +++ L L H     T+  ++R LC  G       +FD M  +G  PN    
Sbjct: 119 RLGFAFSVLAKI-LKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTY 177

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G  +AA  LL     G       +Y S++++L K     EA  +F +   
Sbjct: 178 GTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG 237

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PD +T+  LI  L  + E K        M +    PD+V ++T++  LC+  ++  
Sbjct: 238 QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITE 297

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            H+++  +  +    P+VVTY +++ G+C   +MD+A  +++ M   G  P+ +++N LI
Sbjct: 298 AHDVVDMMIIRG-VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+ K+  M  A Y+ E M     +P+ VT+++L+   C  G+L   + L  EM      
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQI 415

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T+ IL++ LCK++ L++A   LK ++ +++ P   +Y  VIDG C+AG ++ A  I
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + +  K  +P+  T+TI+I G C +G + EA  +F +M   GC+PD  T N++   LL+
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535

Query: 555 GGMPNEAFRIMQRASE 570
                EA R +Q   E
Sbjct: 536 N---KEALRAIQLLQE 548



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 177/326 (54%), Gaps = 1/326 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S+  +N   +  +  N  D+A+  F     ++  P T  FN L+  +++  +    F   
Sbjct: 33  SSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 92

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M SFG  PD+ T N LI+  C +N +     +L ++  K    PD  T+T++I G C 
Sbjct: 93  NQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKI-LKLGHQPDTATFTTLIRGLCV 151

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK+  A  ++++M   G +P+ VT+  LI+G  KVGN  +A  +   M      PDVV 
Sbjct: 152 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 211

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++S+ID  C++ Q+ +   L  +M G+ +SP+++T+T LI++LC           L Q+ 
Sbjct: 212 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 271

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            + ++P   +++ V+D  CK G + EA+ +V  M  +  +P+ VT+  L+ GHC++  M 
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 331

Query: 525 EAISIFNKMLRIGCAPDDITVNSLIS 550
           EA+ +F+ M+  G AP+ I+ N+LI+
Sbjct: 332 EAVKVFDTMVHNGYAPNVISYNTLIN 357



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 202/440 (45%), Gaps = 35/440 (7%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++ S+ +   + +V  + + M S G  P+   +   ++S     +   A  +L++  
Sbjct: 72  FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                  T  + +L+  L  +    +A+++F +      QP+  T+  LI GL ++G   
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A      M    C PD+V Y ++I  LC+  +V     L  ++  +   SPD+ TYTS+
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG-ISPDIFTYTSL 250

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I   C L +    T + N+M +  I P  V F+ ++D   K G +  A  + + M+  G 
Sbjct: 251 IHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 310

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+VVT+++L+DG+C   ++++ +K+ D M     +PNV ++  LIN  CK  R++ A  
Sbjct: 311 EPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 370

Query: 459 FLKQLKWNDLVPKPFMYNP----------------------------------VIDGFCK 484
             +++   +L+P    YN                                   ++D  CK
Sbjct: 371 LFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 430

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
             ++DEA  ++  +E     PD   +TI+I G C  G +  A  IF+ +   G  P+  T
Sbjct: 431 KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 490

Query: 545 VNSLISCLLKGGMPNEAFRI 564
              +I+ L + G+ +EA ++
Sbjct: 491 YTIMINGLCRRGLLDEANKL 510



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 2/304 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           ++ V+ +LC+ G       V D M   G  PN       +       + D A  +     
Sbjct: 282 FSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 341

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   YN+L+N   K    D+A Y+F+E  +    P+T T+N L+     +G ++
Sbjct: 342 HNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQ 400

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   F++M + G  PD+ TY  L+  LC+ + +     LLK ++  S   PD+  YT V
Sbjct: 401 DAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE-GSNMDPDIQIYTIV 459

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G C+ G+++ A  I++ ++S G++P+  T+ ++I+G  + G +  A  +   M   G 
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T++++  G  +N +  + ++L  EM  +  S +V T T+L+  LC +      ++
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 579

Query: 459 FLKQ 462
            L +
Sbjct: 580 ILSE 583



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 11/269 (4%)

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           + +NTL   L   N +   H             P  V +  +++   K  +      + N
Sbjct: 45  LNFNTLDDALSSFNRMLHMHP-----------PPSTVDFNRLLTSIAKTKQYPTVFSLSN 93

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M+S GI P   T N+LI+ F  +  +  A  +  ++L  G+ PD  TF++LI G C  G
Sbjct: 94  QMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEG 153

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++   L L D+M G+   PNV T+  LIN LCK    N A R L+ ++  +  P   +Y 
Sbjct: 154 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 213

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +ID  CK   V EA  + ++M  +   PD  T+T LI   C         ++ N+M+  
Sbjct: 214 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 273

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              PD +  ++++  L K G   EA  ++
Sbjct: 274 KIMPDVVIFSTVVDALCKEGKITEAHDVV 302



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 47/117 (40%)

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           N L+DA     ++      P    +N ++    K         +  +M+     PD  T 
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ILI   C   R+  A S+  K+L++G  PD  T  +LI  L   G   +A  +  +
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDK 164


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 209/407 (51%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            ++++++   E GL  +   VFD M   G +P+       +++ ++ G+   A  +  Q 
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    FM + ++NA  K    DEA    K+   L  +P+  T++ LI G   +G+V
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A      M   G S ++VTY  LI G C+  ++    ++L+ ++ ++   PD   Y  
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+ GK+D A  + +EM   G+K +    N LI+G+ K G +  AE +  RM+ + 
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  ++++L+DGYCR G  ++   LCD+M  + + P V T+  L+  LC+    +DA 
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    + P    Y+ ++DG  K  N + A+ +  ++  +     ++TF  +I G 
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C  G+MVEA  IF+KM  +GC+PD IT  +LI    K     +AF++
Sbjct: 484 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 530



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 2/385 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY L+++  C+    D  + V   M+ +  L P+       +    R GK D A  LL +
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  + F+ NSL+N   K+    EA  +         +PD++++N L+ G  R G 
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +AF     M   G  P ++TYNTL+ GLCRV       ++   +  K   +PD V Y+
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW-HLMMKRGVAPDEVGYS 442

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G  K+   + A+ ++ ++ + G   S +TFN +I G  K+G MV AE + ++M   
Sbjct: 443 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 502

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD +T+ +LIDGYC+   + Q  K+   M+ + +SP++  +  LI+ L K  RL + 
Sbjct: 503 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 562

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L ++    L P    Y  +IDG+CK G +D+A     EM E     + +  + ++ G
Sbjct: 563 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 622

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPD 541
               GR+ EA  +  KM+  G  PD
Sbjct: 623 LYRLGRIDEANLLMQKMVDHGFFPD 647



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 195/414 (47%), Gaps = 4/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++ LC +G  D    ++  M   G  P+       +    +    + A  L    
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T S   +N++++ L K     EA  +F +   L   PD  T+  LI G  +   V
Sbjct: 465 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 524

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+    M     SP I  YN+LISGL +   +    +LL E+  +   +P++VTY +
Sbjct: 525 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG-LTPNIVTYGA 583

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK G +DKA   Y EM   G+  + +  + ++ G  ++G +  A  + ++M+  G
Sbjct: 584 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 643

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + PD   F   +    R   + +     DE     L PN   + I I  LCK  +++DAR
Sbjct: 644 FFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 700

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           RF   L     VP  F Y  +I G+  AGNVDEA  +  EM  +   P+ VT+  LI G 
Sbjct: 701 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C    +  A  +F+K+ + G  P+ +T N+LI    K G  + AF++  +  E+
Sbjct: 761 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 218/481 (45%), Gaps = 68/481 (14%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + Y +++   C  G  D    + D M   G   N  +    ++   + G+   A+G++++
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +   ++ YN+LL+   ++ +  EA  +  +  +   +P   T+N L++GL R+G 
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A + ++ M   G +PD V Y+TL+ GL ++        L K++  +  F+   +T+ 
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG-FTKSRITFN 477

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN-------------- 382
           ++ISG CK+GKM +A  I+++M   G  P  +T+  LIDG+ K  N              
Sbjct: 478 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE 537

Query: 383 -----------MVSAEYMRERMLSF----------GYLPDVVTFSSLIDGYCRNGQLNQG 421
                      ++S  +   R++            G  P++VT+ +LIDG+C+ G L++ 
Sbjct: 538 PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 597

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL------------------ 463
                EM    LS N+   + +++ L +  R+++A   ++++                  
Sbjct: 598 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 657

Query: 464 -----KWND---------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
                K  D         L+P   +YN  I G CK G VD+A    + +  K   PD  T
Sbjct: 658 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 717

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  LI G+   G + EA  + ++MLR G  P+ +T N+LI+ L K    + A R+  +  
Sbjct: 718 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 777

Query: 570 E 570
           +
Sbjct: 778 Q 778



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 203/420 (48%), Gaps = 2/420 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL +  +  TY+ ++     +G  ++ + V  +M   G   N       +    +  K D
Sbjct: 220 NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 279

Query: 209 AAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            A+ +L   +    +      Y  L++   +    D+AV +  E  RL  + + +  N L
Sbjct: 280 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 339

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  + GE+ +A      M  +   PD  +YNTL+ G CR    +    L  ++  +  
Sbjct: 340 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM-LQEG 398

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P V+TY +++ G C++G  D A  I++ M   G+ P  V ++ L+DG  K+ N   A 
Sbjct: 399 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAS 458

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + +L+ G+    +TF+++I G C+ G++ +  ++ D+MK    SP+  T+  LI+  
Sbjct: 459 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 518

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK + +  A +    ++   + P   MYN +I G  K+  + E   ++ EM  +   P+ 
Sbjct: 519 CKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNI 578

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+  LI G C +G + +A S + +M   G + + I  ++++S L + G  +EA  +MQ+
Sbjct: 579 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 638



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 174/336 (51%), Gaps = 4/336 (1%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           E   S  +++ +L   V++     A+Y+F    +    P   + N L+  L + GE   A
Sbjct: 117 EFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 176

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
              +  M   G  PD+   + +++  C+  +V      +K+++      P++VTY S+I+
Sbjct: 177 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLIN 235

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE-YMRERMLSFGYL 399
           GY  LG ++ A G+   M+  G+  + VT+ +LI G+ K   M  AE  +R        +
Sbjct: 236 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 295

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD   +  LIDGYCR G+++  ++L DEM    L  N++    LIN  CK   +++A   
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 355

Query: 460 L-KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           + + + WN L P  + YN ++DG+C+ G+  EA  +  +M ++  +P  +T+  L+ G C
Sbjct: 356 ITRMVDWN-LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 414

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             G   +A+ I++ M++ G APD++  ++L+  L K
Sbjct: 415 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFK 450



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 4/348 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+MG     + +FD M+  G  P+       +    +A     A  +    
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ S  MYNSL++ L K     E   +  E       P+  T+  LI G  + G +
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF  +++M   G S +I+  +T++SGL R+  +   + L++++     F PD   +  
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM-VDHGFFPD---HEC 650

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +    +   + K     +E     + P+ + +N+ I G  K G +  A      +   G
Sbjct: 651 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 710

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PD  T+ +LI GY   G +++  +L DEM  + L PN+ T+  LIN LCK   ++ A+
Sbjct: 711 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 770

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           R   +L    L P    YN +IDG+CK GN+D A  +  +M E+   P
Sbjct: 771 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 140/276 (50%), Gaps = 5/276 (1%)

Query: 306 LCRVNEVARGHELLKE-VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           LC+  +  RG+ +  E V    EF+     +  ++  Y + G    A  +++ M  CG  
Sbjct: 97  LCKFKD--RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRI 154

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           PS  + N L++   K G   +A Y+ ++M+  G +PDV   S +++ +C++G++++    
Sbjct: 155 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 214

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             +M+   + PN+ T+  LIN       +  A+  LK +    +      Y  +I G+CK
Sbjct: 215 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 274

Query: 485 AGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
              +DEA  ++  M EE    PD+  + +LI G+C  G++ +A+ + ++MLR+G   +  
Sbjct: 275 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 334

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
             NSLI+   K G  +EA  ++ R   D NL+  S+
Sbjct: 335 ICNSLINGYCKRGEIHEAEGVITRMV-DWNLKPDSY 369



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 126/243 (51%), Gaps = 1/243 (0%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P + +  S+++   K G+   A  +Y +M   GI P     +++++ F K G +  A   
Sbjct: 155 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 214

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M + G  P++VT+ SLI+GY   G +     +   M  K +S NV T+T+LI   CK
Sbjct: 215 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 274

Query: 450 ENRLNDARRFLKQLKWND-LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           + ++++A + L+ ++    LVP    Y  +IDG+C+ G +D+A  ++ EM     K +  
Sbjct: 275 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 334

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
               LI G+C +G + EA  +  +M+     PD  + N+L+    + G  +EAF +  + 
Sbjct: 335 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 394

Query: 569 SED 571
            ++
Sbjct: 395 LQE 397


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 214/431 (49%), Gaps = 1/431 (0%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           + F +++   +  NH   +YN ++  L + G  D V   ++ M + G +PN+    + + 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           S  +A + + A+ +         + + F Y+ L+  L +    DEA  +  E      QP
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +  T+  L+ GL ++G++K+A + F  M   GC PD V YN LI G  +  ++   + L 
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  K    P V TY S++SG+ + G+  +   ++ +M   G  P+  TFN L+DGF K
Sbjct: 181 EEMLEKGCI-PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           +G+MV A  +   M S G  PDVV++++LI G C  G+ ++  +L  EM    + P++ +
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + ILI+   K   L+ A +   ++  + L P  F Y+ +ID  C+AG V  A V+  +M 
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
                PD      L+IG C   R+ E+  +F  M++  C P     N L+  L K    +
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419

Query: 560 EAFRIMQRASE 570
           +   I    +E
Sbjct: 420 DVCEIFHELTE 430



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 192/384 (50%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++RSLC+    +  + VF  M + G  PN       ++   R  K D A  LL++ 
Sbjct: 54  TYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM 113

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G    +   Y SLL+ L K     EAV +F         PD   +N+LI G S+ G++
Sbjct: 114 IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDM 173

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+  F +M   GC P + TYN+L+SG  R  E  R   L K++  +    P++ T+ +
Sbjct: 174 GEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM-LRQGCVPNIFTFNN 232

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+CK+G M +A  ++ EM S G  P  V++N LI G    G    A+ +   M+  G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG 292

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V+++ LIDGY ++G L+  +KL  E+    L P+ ++++ +I+ LC+  ++  A 
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +  N   P   +  P++ G C+   + E+  +   M +  C P    + +L+   
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKL 412

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
           C   R  +   IF+++   G +PD
Sbjct: 413 CKAKRSDDVCEIFHELTERGFSPD 436



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 158/335 (47%), Gaps = 1/335 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+MG       +F  M   G  P+  +    +    + G    A  L  + 
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + F YNSLL+   ++        +FK+  R    P+ +TFN L+ G  ++G++
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M S GC PD+V+YNTLI G+C   +      LL+E+  +S   PD+V+Y  
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM-IRSGVGPDIVSYNI 302

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY K G +D A  ++ E+   G++P A +++ +ID   + G + +A  + + M++ G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD      L+ G CR  +L +  +L   M      P +  + +L+  LCK  R +D  
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVC 422

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
               +L      P   +   +++   ++ + D A 
Sbjct: 423 EIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 209/407 (51%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            ++++++   E GL  +   VFD M   G +P+       +++ ++ G+   A  +  Q 
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    FM + ++NA  K    DEA    K+   L  +P+  T++ LI G   +G+V
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A      M   G S ++VTY  LI G C+  ++    ++L+ ++ ++   PD   Y  
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+ GK+D A  + +EM   G+K +    N LI+G+ K G +  AE +  RM+ + 
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  ++++L+DGYCR G  ++   LCD+M  + + P V T+  L+  LC+    +DA 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    + P    Y+ ++DG  K  N + A+ +  ++  +     ++TF  +I G 
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C  G+MVEA  IF+KM  +GC+PD IT  +LI    K     +AF++
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 2/385 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY L+++  C+    D  + V   M+ +  L P+       +    R GK D A  LL +
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  + F+ NSL+N   K+    EA  +         +PD++++N L+ G  R G 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +AF     M   G  P ++TYNTL+ GLCRV       ++   +  K   +PD V Y+
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW-HLMMKXGVAPDEVGYS 476

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G  K+   + A+ ++ ++ + G   S +TFN +I G  K+G MV AE + ++M   
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD +T+ +LIDGYC+   + Q  K+   M+ + +SP++  +  LI+ L K  RL + 
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEX 596

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L ++    L P    Y  +IDG+CK G +D+A     EM E     + +  + ++ G
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPD 541
               GR+ EA  +  KM+  G  PD
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 203/459 (44%), Gaps = 39/459 (8%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+ +L     +YN ++   C  G       + D M  +G  P        +    R G  
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  +        V      Y++LL+ L K  N + A  ++K+           TFN +
Sbjct: 454 DDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH----------- 316
           I GL ++G++ +A E F  M   GCSPD +TY TLI G C+ + V +             
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXI 573

Query: 317 ------------------------ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
                                   +LL E+  +   +P++VTY ++I G+CK G +DKA 
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG-LTPNIVTYGALIDGWCKEGMLDKAF 632

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
             Y EM   G+  + +  + ++ G  ++G +  A  + ++M+  G+ PD   F   +   
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSD 689

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            R   + +     DE     L PN   + I I  LCK  +++DARRF   L     VP  
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           F Y  +I G+  AGNVDEA  +  EM  +   P+ VT+  LI G C    +  A  +F+K
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + + G  P+ +T N+LI    K G  + AF++  +  E+
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 218/481 (45%), Gaps = 68/481 (14%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + Y +++   C  G  D    + D M   G   N  +    ++   + G+   A+G++++
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +   ++ YN+LL+   ++ +  EA  +  +  +   +P   T+N L++GL R+G 
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A + ++ M   G +PD V Y+TL+ GL ++        L K++  +  F+   +T+ 
Sbjct: 453 FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG-FTKSRITFN 511

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN-------------- 382
           ++ISG CK+GKM +A  I+++M   G  P  +T+  LIDG+ K  N              
Sbjct: 512 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE 571

Query: 383 -----------MVSAEYMRERMLSF----------GYLPDVVTFSSLIDGYCRNGQLNQG 421
                      ++S  +   R++            G  P++VT+ +LIDG+C+ G L++ 
Sbjct: 572 XISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL------------------ 463
                EM    LS N+   + +++ L +  R+++A   ++++                  
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 691

Query: 464 -----KWND---------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
                K  D         L+P   +YN  I G CK G VD+A    + +  K   PD  T
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  LI G+   G + EA  + ++MLR G  P+ +T N+LI+ L K    + A R+  +  
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811

Query: 570 E 570
           +
Sbjct: 812 Q 812



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 212/496 (42%), Gaps = 76/496 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++ LC +G  D    ++  M   G  P+       +    +    + A  L    
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T S   +N++++ L K     EA  +F +   L   PD  T+  LI G  +   V
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+    M     SP I  YN+LISGL +   +    +LL E+  +   +P++VTY +
Sbjct: 559 GQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG-LTPNIVTYGA 617

Query: 338 VISGYCK-----------------------------------LGKMDKATGIYNEM---- 358
           +I G+CK                                   LG++D+A  +  +M    
Sbjct: 618 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG 677

Query: 359 ----NSCGIK------------------------PSAVTFNVLIDGFGKVGNMVSAEYMR 390
               + C +K                        P+ + +N+ I G  K G +  A    
Sbjct: 678 FFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 737

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             +   G++PD  T+ +LI GY   G +++  +L DEM  + L PN+ T+  LIN LCK 
Sbjct: 738 SMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKS 797

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             ++ A+R   +L    L P    YN +IDG+CK GN+D A  +  +M E+   P  VT+
Sbjct: 798 ENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTY 857

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + LI G C  G +  ++ + N+M++ G     I   +L+    +GG     +  M +   
Sbjct: 858 SALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV----QGGFKTSNYNEMSKPEA 913

Query: 571 -DQNLQ---LPSWKKA 582
             QN+    LP +K +
Sbjct: 914 LKQNMNCFLLPKFKHS 929



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 203/420 (48%), Gaps = 2/420 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL +  +  TY+ ++     +G  ++ + V  +M   G   N       +    +  K D
Sbjct: 254 NLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMD 313

Query: 209 AAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            A+ +L   +    +      Y  L++   +    D+AV +  E  RL  + + +  N L
Sbjct: 314 EAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSL 373

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  + GE+ +A      M  +   PD  +YNTL+ G CR    +    L  ++  +  
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM-LQEG 432

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P V+TY +++ G C++G  D A  I++ M   G+ P  V ++ L+DG  K+ N   A 
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGAS 492

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + +L+ G+    +TF+++I G C+ G++ +  ++ D+MK    SP+  T+  LI+  
Sbjct: 493 TLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGY 552

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK + +  A +    ++   + P   MYN +I G  K+  + E   ++ EM  +   P+ 
Sbjct: 553 CKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNI 612

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+  LI G C +G + +A S + +M   G + + I  ++++S L + G  +EA  +MQ+
Sbjct: 613 VTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQK 672



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 174/336 (51%), Gaps = 4/336 (1%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           E   S  +++ +L   V++     A+Y+F    +    P   + N L+  L + GE   A
Sbjct: 151 EFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTA 210

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
              +  M   G  PD+   + +++  C+  +V      +K+++      P++VTY S+I+
Sbjct: 211 HYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKME-NLGVEPNIVTYHSLIN 269

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE-YMRERMLSFGYL 399
           GY  LG ++ A G+   M+  G+  + VT+ +LI G+ K   M  AE  +R        +
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD   +  LIDGYCR G+++  ++L DEM    L  N++    LIN  CK   +++A   
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389

Query: 460 L-KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           + + + WN L P  + YN ++DG+C+ G+  EA  +  +M ++  +P  +T+  L+ G C
Sbjct: 390 ITRMVDWN-LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             G   +A+ I++ M++ G APD++  ++L+  L K
Sbjct: 449 RVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFK 484



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 142/284 (50%), Gaps = 5/284 (1%)

Query: 298 TYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            Y   +  LC+  +  RG+ +  E V    EF+     +  ++  Y + G    A  +++
Sbjct: 123 AYLNQLVDLCKFKD--RGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFD 180

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M  CG  PS  + N L++   K G   +A Y+ ++M+  G +PDV   S +++ +C++G
Sbjct: 181 NMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG 240

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++++      +M+   + PN+ T+  LIN       +  A+  LK +    +      Y 
Sbjct: 241 KVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYT 300

Query: 477 PVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
            +I G+CK   +DEA  ++  M EE    PD+  + +LI G+C  G++ +A+ + ++MLR
Sbjct: 301 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR 360

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           +G   +    NSLI+   K G  +EA  ++ R   D NL+  S+
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV-DWNLKPDSY 403



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 126/243 (51%), Gaps = 1/243 (0%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P + +  S+++   K G+   A  +Y +M   GI P     +++++ F K G +  A   
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGF 248

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M + G  P++VT+ SLI+GY   G +     +   M  K +S NV T+T+LI   CK
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308

Query: 450 ENRLNDARRFLKQLKWND-LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           + ++++A + L+ ++    LVP    Y  +IDG+C+ G +D+A  ++ EM     K +  
Sbjct: 309 QCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 368

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
               LI G+C +G + EA  +  +M+     PD  + N+L+    + G  +EAF +  + 
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428

Query: 569 SED 571
            ++
Sbjct: 429 LQE 431


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 214/410 (52%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  +C  G         D++ + G   +       ++   + G+  AA  +L + 
Sbjct: 131 TFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI 190

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V     MYN ++N+L K     +A  ++ E       PD  TFN LI G   +G++
Sbjct: 191 EGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQL 250

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+AF  F++M     +PD+ T++ L+  LC+   + R   +L  V  K    PDVVTY+S
Sbjct: 251 KEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNML-AVMMKQGVIPDVVTYSS 309

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC + +++KA  +++ M+  G+ P A ++N++I+G GK+  +  A  + + M   G
Sbjct: 310 LMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG 369

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT++SLIDG C+ G+++   +L DEM    +  ++ T+  LI+ LCK + ++ A 
Sbjct: 370 IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAI 429

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +K++K   + P  + YN +IDG CK G +  A  +  ++  K    +  T+ I+I G 
Sbjct: 430 ALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGL 489

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +G   EA  + +KM   G  PD +T  ++I  L +     +A ++++ 
Sbjct: 490 CKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLRE 539



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 196/394 (49%), Gaps = 7/394 (1%)

Query: 189 PNSPMIEF--FVSSCIRAG--KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           P   ++EF   + S ++A       A  L  Q     +T +   +N L+N          
Sbjct: 53  PTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTF 112

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  +F +  +L   P T TFN LI G+   G++K+A  F   + + G   D V+Y TLI+
Sbjct: 113 AFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLIN 172

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC++ E     ++LK+++ K   + DVV Y  +I+  CK   +  A  +Y+EM +  I 
Sbjct: 173 GLCKIGETRAALQMLKKIEGKL-VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS 231

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  VTFN LI GF  VG +  A  +   M+     PDV TFS L+D  C++G + +   +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
              M  + + P+V T++ L++  C  N +N A+     +    + P    YN +I+G  K
Sbjct: 292 LAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK 351

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
              VDEA  +  EM  K   PD VT+  LI G C  GR+  A  + ++M   G   D +T
Sbjct: 352 IKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILT 411

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
            NSLI  L K    ++A  ++++  +DQ +Q PS
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKI-KDQGIQ-PS 443



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 151/278 (54%), Gaps = 13/278 (4%)

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNE------VARGHELLKEVKFKSEFSPDVVTYTS 337
           F+ M     +P IV +N ++  + + N       ++  H+L  E+K     +P +VT+  
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQL--ELK---GITPTIVTFNI 99

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++ YC LG+M  A  I+ ++   G  P+ +TFN LI+G    G +  A +  + +++ G
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +  D V++ +LI+G C+ G+    L++  +++GK ++ +V  + I+IN+LCK+  ++DA 
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    + P    +N +I GFC  G + EA  +  EM  K   PD  TF+IL+   
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS--CLL 553
           C  G +  A ++   M++ G  PD +T +SL+   CL+
Sbjct: 280 CKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 1/278 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+++++ +LC+ G     + +   M   G +P+       +       + + A
Sbjct: 264 NINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKA 323

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K + S      V      YN ++N L K    DEA+ +FKE       PDT T+N LI G
Sbjct: 324 KHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDG 383

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L ++G +  A++   +M + G   DI+TYN+LI  LC+ + + +   L+K++K +    P
Sbjct: 384 LCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG-IQP 442

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            + TY  +I G CK G++  A  ++ ++   G   +A T+N++I+G  K G    AE + 
Sbjct: 443 SMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLL 502

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            +M + G +PD VT+ ++I    R  +  +  KL  EM
Sbjct: 503 SKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 198/338 (58%), Gaps = 4/338 (1%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           + +S    N L++ LVK     +  +++KE  R   +P   +FNI+I GL ++G++ KA 
Sbjct: 124 LKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAG 183

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE---LLKEVKFKSEFSPDVVTYTSV 338
           +   DM   G S +++TYNTLI G C++ ++ + ++   +LKE++      P+ VT+  +
Sbjct: 184 DIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG-ICPNEVTFNIL 242

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK   +  A  ++ EMN  G+KP+ VT+N LI+G    G +  A  +R++M++   
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+++T ++L++G+C+N  + Q  +L D+M  + ++PNV T+ ILI+A CK+  + DA  
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + +    + P    YN +I G C+ G+++ A  +V+EM+ K  K D +T+ ILI   C
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            KG M +A+ + ++M R G  P  +T N++I    K G
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 215/429 (50%), Gaps = 11/429 (2%)

Query: 135 NPKLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           N +  L F  F R  +  L  S  + N +M  L ++G    ++ V+  M      P    
Sbjct: 106 NLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLIS 165

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE---AVYMFK 250
               ++   + GK + A  ++   +   V+ +   YN+L++   K     +   A  + K
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILK 225

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC--- 307
           E       P+  TFNILI G  +   V  A + F +M   G  P++VTYN+LI+GLC   
Sbjct: 226 EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNG 285

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +VNE       L++    S   P+++T+ ++++G+CK   + +A  ++++M   GI P+ 
Sbjct: 286 KVNEAT----ALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNV 341

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T+N+LID + K  NM  A  +   ML  G  PDV T++ LI G CR G L     L  E
Sbjct: 342 TTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSE 401

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  K+L  ++ T+ ILI++LC +  +  A R L ++    L P    YN +IDG+CK GN
Sbjct: 402 MDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGN 461

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +  A  + ++ME+     +  T+ +LI G C K ++ +A  + N+ML  G  P+ +T   
Sbjct: 462 LRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEI 521

Query: 548 LISCLLKGG 556
           +   +++ G
Sbjct: 522 VTEEMMEKG 530



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 164/300 (54%), Gaps = 4/300 (1%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           ++   +IL+   ++    +  FE F     +G    + + N L+SGL +V E+     + 
Sbjct: 92  NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF-- 377
           KE+  +    P ++++  VI+G CK+GK++KA  I  +M   G+  + +T+N LIDG+  
Sbjct: 152 KEM-IRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCK 210

Query: 378 -GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
            GK+G M  A+ + + M + G  P+ VTF+ LIDG+C++  ++  +K+  EM  + + PN
Sbjct: 211 MGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           V T+  LIN LC   ++N+A     Q+  + L P    +N +++GFCK   V +A  +  
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +M ++   P+  T+ ILI  +C    M +A +++  ML  G  PD  T N LI+ L + G
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 3/160 (1%)

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+  Y +N +   G +         L  +V +   L++ L K   + D     K++    
Sbjct: 99  LVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR 158

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK---GRMV 524
           + P    +N VI+G CK G +++A  I+ +M+ +    + +T+  LI G+C     G+M 
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +A +I  +M   G  P+++T N LI    K    + A ++
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKV 258


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 224/432 (51%), Gaps = 46/432 (10%)

Query: 178 VFDYMRSDGHLPNSP-----MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           +F ++    HL +SP     + +  V S  R G    A  LL          +   YN++
Sbjct: 114 LFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAV 173

Query: 233 LNALVKQNNA-----DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           L+AL++++++     D+A  +F++  R    P+ +T+N++I+G+   G+++K   F   M
Sbjct: 174 LDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM 233

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G SP++VTYNTLI   C+  +V     LL+ +      + ++++Y SVI+G C  G+
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGG-VAANLISYNSVINGLCGKGR 292

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           M +   +  EM   G+ P  VT+N L++GF K GN+     +   M+  G  P+VVT+++
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT 352

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+  C+ G L++ +++ D+M+ + L PN  T+T LI+  C++  +N+A + L ++  + 
Sbjct: 353 LINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEA-------------------NVIVA------------ 496
             P    YN ++ G+C  G V EA                   + ++A            
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472

Query: 497 ----EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               EM EK   PD VT++ LI G C++ ++VEA  +F +M+R G  PD++T  SLI+  
Sbjct: 473 QMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAY 532

Query: 553 LKGGMPNEAFRI 564
              G  ++A R+
Sbjct: 533 CVDGELSKALRL 544



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 216/424 (50%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+  LC  G    V  + + MR  G +P+       V+   + G       LLS+ 
Sbjct: 279 SYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM 338

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +   Y +L+N + K  N   AV +F +      +P+  T+  LI G  + G +
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++   +M   G SP +VTYN L+ G C +  V     +L+ +  +    PDVV+Y++
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGM-VERGLPPDVVSYST 457

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+C+  ++ KA  +  EM   G+ P  VT++ LI G      +V A  +   M+  G
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT++SLI+ YC +G+L++ L+L DEM  +   P+  T+++LIN L K+ R   A+
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577

Query: 458 RFLKQLKWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVAEMEEKR 502
           R L +L + + VP    YN +I+               GFC  G ++EA+ +   M ++ 
Sbjct: 578 RLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRN 637

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            KP+   + ++I GH   G + +A +++ ++     A   + V +L+  L + GM +E  
Sbjct: 638 HKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELS 697

Query: 563 RIMQ 566
           R++Q
Sbjct: 698 RLLQ 701



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 239/471 (50%), Gaps = 20/471 (4%)

Query: 108 YLSDTCARYLCEKLSPLNSLEV----IKRLDNPKLGLKFLEFSRVNLSLNHSFK----TY 159
           +L DT   +LC   SP +S  V    +K L   +LG      + ++L+  H F     +Y
Sbjct: 117 HLHDTF--HLCS--SPFSSSAVFDLVVKSLS--RLGFVPKALTLLHLANRHGFAPTVLSY 170

Query: 160 NLVM-----RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           N V+     RS      +D  + VF  M  +G  PN       +   +  G  +   G +
Sbjct: 171 NAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFM 230

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     ++ +   YN+L++A  K+    EA+ + +         +  ++N +I GL   
Sbjct: 231 RKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGK 290

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +  E   +M   G  PD VTYNTL++G C+   + +G  LL E+  K   SP+VVT
Sbjct: 291 GRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG-LSPNVVT 349

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I+  CK G + +A  I+++M   G++P+  T+  LIDGF + G M  A  +   M+
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G+ P VVT+++L+ GYC  G++ + + +   M  + L P+V +++ +I   C+E  L 
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG 469

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A +  +++    ++P    Y+ +I G C    + EA  +  EM  +   PD+VT+T LI
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +C+ G + +A+ + ++M++ G  PD++T + LI+ L K      A R++
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLL 580



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 212/424 (50%), Gaps = 16/424 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++R +   G  +        M  +G  PN       + +  +  K   A  LL   
Sbjct: 209 TYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAM 268

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G V  +   YNS++N L  +    E   + +E       PD  T+N L+ G  + G +
Sbjct: 269 AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNL 328

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +      +M   G SP++VTY TLI+ +C+   ++R  E+  +++ +    P+  TYT+
Sbjct: 329 HQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG-LRPNERTYTT 387

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+ G M++A  + +EM   G  PS VT+N L+ G+  +G +  A  +   M+  G
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERG 447

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV++S++I G+CR  +L +  ++ +EM  K + P+  T++ LI  LC + +L +A 
Sbjct: 448 LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAF 507

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++    L P    Y  +I+ +C  G + +A  +  EM ++   PD VT+++LI G 
Sbjct: 508 DLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGL 567

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI-SC----------LLKG----GMPNEAF 562
             K R   A  +  K+      PDD+T N+LI +C          L+KG    G+ NEA 
Sbjct: 568 NKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEAD 627

Query: 563 RIMQ 566
           R+ +
Sbjct: 628 RVFK 631



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 180/399 (45%), Gaps = 16/399 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  +C+ G       +FD MR  G  PN       +    + G  + A  +LS+ 
Sbjct: 349 TYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEM 408

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + S   YN+L++         EAV + +        PD  +++ +I G  R  E+
Sbjct: 409 IVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCREREL 468

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF+   +M   G  PD VTY++LI GLC   ++    +L +E+  +    PD VTYTS
Sbjct: 469 GKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREM-MRRGLPPDEVTYTS 527

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+ YC  G++ KA  +++EM   G  P  VT++VLI+G  K      A+ +  ++    
Sbjct: 528 LINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEE 587

Query: 398 YLPDVVTFSSLID---------------GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
            +PD VT+++LI+               G+C  G +N+  ++   M  +N  PN   + +
Sbjct: 588 SVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNL 647

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I+   +   ++ A     +L+ +           ++    + G  DE + ++  +    
Sbjct: 648 MIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSC 707

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
              D     +L+  +  +G M   +++  +M + G  PD
Sbjct: 708 RLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score = 45.1 bits (105), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 52/143 (36%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N+ FK+   +++  C  GL +    VF  M    H PN+ +    +    R G    A  
Sbjct: 604 NNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYN 663

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L  +         T    +L+ AL ++   DE   + +   R     D     +L++   
Sbjct: 664 LYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNF 723

Query: 273 RIGEVKKAFEFFYDMGSFGCSPD 295
           + G +        +M   G  PD
Sbjct: 724 KEGNMDAVLNVLTEMAKDGLLPD 746


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 212/421 (50%), Gaps = 13/421 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C+MG   S   +   M     + PN  +    +    + G+   A+ L S+
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   ++ + F YN ++N         EA  + +E F     PD  TF++LI  L + G+
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TYN++I G  + N +     +   +  K   SPDV+T++
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG-CSPDVITFS 392

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I GYC   ++D    + +EM+  G+  + +T+  LI GF ++GN+ +A  + + M+S 
Sbjct: 393 ILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISS 452

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-----------NLSPNVYTFTILIN 445
           G  P+VVT ++L+DG C NG+L   L++   M+             ++ P+V T+ ILI 
Sbjct: 453 GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILIC 512

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E + ++A    +++    LVP    YN VIDG CK   +DEA  +   M  K   P
Sbjct: 513 GLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSP 572

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D VTFT LI G+C  GR+ + + +F +M R G   + IT  +LI    + G  N A  I 
Sbjct: 573 DVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIF 632

Query: 566 Q 566
           Q
Sbjct: 633 Q 633



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 205/405 (50%), Gaps = 12/405 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++  L + G     Q +F  M+  G  PN       ++    +G+   A+ LL +  
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +++     ++ L+NALVK+    EA  ++ E       P+T T+N +I G S+   + 
Sbjct: 311 ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLD 370

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   FY M + GCSPD++T++ LI G C    V  G +LL E+  +     + +TYT++
Sbjct: 371 AAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMS-RRGLVANTITYTTL 429

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS--- 395
           I G+C+LG ++ A  +  EM S G+ P+ VT N L+DG    G +  A  M + M     
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 396 -------FGYL-PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                  F  + PDV T++ LI G    G+ ++  +L +EM  + L P+  T+  +I+ L
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGL 549

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK++RL++A +    +      P    +  +I+G+CK G V +   +  EM  +    + 
Sbjct: 550 CKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +T+  LI G C  G +  A+ IF +M+  G  PD IT+ ++++ L
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 185/364 (50%), Gaps = 12/364 (3%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P  VT ST     LL+ L  ++   EA++ F +      +P+   F  L+ GL R G 
Sbjct: 142 FHPSLVTFST-----LLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGR 192

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A      M   G  P+ +TY T++ G+C++ +      LL++++  S   P+VV Y+
Sbjct: 193 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYS 252

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G  K G+   A  +++EM   GI P+  T+N +I+GF   G    A+ +   M   
Sbjct: 253 AIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER 312

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PDVVTFS LI+   + G+  +  +L +EM  + + PN  T+  +I+   K+NRL+ A
Sbjct: 313 KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA 372

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R    +      P    ++ +IDG+C A  VD+   ++ EM  +    + +T+T LI G
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHG 432

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
            C  G +  A+ +  +M+  G  P+ +T N+L+  L   G   +A   F++MQ++  D +
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLD 492

Query: 574 LQLP 577
              P
Sbjct: 493 ASHP 496



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 200/400 (50%), Gaps = 11/400 (2%)

Query: 170 GLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
           GL D++ + F YM     LP   +I+F   +   +R  + D    L  +     +  + +
Sbjct: 56  GLDDAIDL-FGYMVRSRPLP--CVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIY 112

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            +  L+      +    A+  F +  +L   P   TF+ L+ GL     V +A  FF+ +
Sbjct: 113 SFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI 172

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
               C P+++ + TL++GLCR   V     LL  +  +    P+ +TY +++ G CK+G 
Sbjct: 173 ----CKPNVIAFTTLMNGLCREGRVVEAVALLDRM-VEDGLQPNQITYGTIVDGMCKMGD 227

Query: 348 MDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
              A  +  +M     IKP+ V ++ +IDG  K G    A+ +   M   G  P++ T++
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            +I+G+C +G+ ++  +L  EM  + +SP+V TF++LINAL KE +  +A     ++   
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            ++P    YN +IDGF K   +D A  +   M  K C PD +TF+ILI G+C   R+ + 
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDG 407

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           + + ++M R G   + IT  +LI    + G  N A  ++Q
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQ 447



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 138/277 (49%), Gaps = 12/277 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++   C     D    +   M   G + N+      +    + G  +AA  LL + 
Sbjct: 390 TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM 449

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY-----------SQPDTWTFNI 266
               V  +    N+LL+ L       +A+ MFK   +              +PD  T+NI
Sbjct: 450 ISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNI 509

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI GL   G+  +A E + +M   G  PD +TYN++I GLC+ + +    ++   +  K 
Sbjct: 510 LICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG 569

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            FSPDVVT+T++I+GYCK+G++     ++ EM   GI  +A+T+  LI GF +VGN+  A
Sbjct: 570 -FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGA 628

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
             + + M+S G  PD +T  +++ G     +L + ++
Sbjct: 629 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 5/242 (2%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V+ +  ++    ++ + D    ++ +M    I  +  +F +LI  F     +  A   
Sbjct: 74  PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALST 133

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++   G+ P +VTFS+L+ G C   ++++ L    ++      PNV  FT L+N LC+
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCR 189

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KRCKPDKV 508
           E R+ +A   L ++  + L P    Y  ++DG CK G+   A  ++ +MEE  R KP+ V
Sbjct: 190 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVV 249

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            ++ +I G    GR  +A ++F++M   G +P+  T N +I+     G  +EA R+++  
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309

Query: 569 SE 570
            E
Sbjct: 310 FE 311



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 10/181 (5%)

Query: 396 FGY------LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           FGY      LP V+ F  L+    R  + +  + L  +M+ + +  N+Y+FTILI   C 
Sbjct: 64  FGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCS 123

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            ++L  A     ++      P    ++ ++ G C    V EA     ++    CKP+ + 
Sbjct: 124 CSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIA 179

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           FT L+ G C +GR+VEA+++ ++M+  G  P+ IT  +++  + K G    A  ++++  
Sbjct: 180 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 239

Query: 570 E 570
           E
Sbjct: 240 E 240



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 7/187 (3%)

Query: 140 LKFLEFSRVNLSLNHSF-------KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
            K ++ S+++L  +H F       +TYN+++  L   G     + +++ M   G +P++ 
Sbjct: 481 FKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTI 540

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +    +  + D A  +         +     + +L+N   K     + + +F E 
Sbjct: 541 TYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEM 600

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            R     +  T+  LI G  ++G +  A + F +M S G  PD +T   +++GL    E+
Sbjct: 601 GRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 660

Query: 313 ARGHELL 319
            R  + L
Sbjct: 661 KRAVQCL 667


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 216/444 (48%), Gaps = 37/444 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ SL   GL D ++ V+  M  D   PN       V+   + G  + A   +S   
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------YFRLYS--------- 257
              +    F Y SL+    ++ + D A  +FKE            Y  L           
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 258 --------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
                          P   T+ +LI+ L       +A     +M   G  P+I TY  LI
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             LC   ++ +  ELL ++  +    P+V+TY ++I+GYCK G ++ A  +   M S  +
Sbjct: 366 DSLCSQCKLEKARELLGQM-LEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNL 424

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P+  T+N LI G+ K  N+  A  +  +ML    LPDVVT++SLIDG CR+G  +   +
Sbjct: 425 RPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L   M  + L P+ +T+T +I++LCK  R+ +A      L+  D++P   MY  +IDG+C
Sbjct: 484 LLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYC 543

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           KAG V+EA++++ +M  K C P+ +TF  LI G C  G++ EA  +  KM++I   P   
Sbjct: 544 KAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVS 603

Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
           T   LI  LLK G  + A+R  Q+
Sbjct: 604 TDTILIHRLLKDGDFDHAYRRFQQ 627



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 200/411 (48%), Gaps = 9/411 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TY +++++LC          +   M   G  PN       + S     K + A+ LL
Sbjct: 322 TVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELL 381

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            Q     +  +   YN+L+N   K+   ++A+ + +       +P+T T+N LI+G  + 
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK- 440

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             V KA      M      PD+VTYN+LI G CR       + LL  +  +    PD  T
Sbjct: 441 RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG-LVPDPWT 499

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YTS+I   CK  ++++A  +++ +    + P+ V +  LIDG+ K G +  A  M E+ML
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S   LP+ +TF++LI G C +G+L +   L ++M   +L P V T TILI+ L K+   +
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A R  +Q+  +   P    Y   I  +C+ G + +A  +VA+M+E    PD  T++ LI
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL-------KGGMP 558
            G+   GR   A  +  +M   GC P   T  SLI  LL       KGG P
Sbjct: 680 KGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEP 730



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 204/458 (44%), Gaps = 37/458 (8%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L+  F TY  ++   C+    DS   VF  M   G   N       +       + 
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  L  + +  +   +   Y  L+ AL       EA+ + KE      +P+  T+ +L
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I  L    +++KA E    M   G  P+++TYN LI+G C+   +    +++ E+     
Sbjct: 365 IDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVV-ELMESRN 423

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+  TY  +I GYCK   + KA G+ N+M    + P  VT+N LIDG  + GN  SA 
Sbjct: 424 LRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M   G +PD  T++S+ID  C++ ++ +   L D ++ K++ PNV  +T LI+  
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI------------- 494
           CK  ++N+A   L+++   + +P    +N +I G C  G + EA ++             
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 495 ----------------------VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
                                   +M     KPD  T+T  I  +C +GR+ +A  +  K
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           M   G +PD  T +SLI      G  N AF +++R  +
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 189/390 (48%), Gaps = 48/390 (12%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + Y SLL  L+  NN    V +FK    +    D+    + +  L R     ++FE  
Sbjct: 122 SVYSYASLLTLLI--NNGYVGV-VFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELK 178

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
           Y +   GC      YNTL++ L R   V    ++  E+  + +  P++ TY  +++GYCK
Sbjct: 179 YKL-IIGC------YNTLLNSLARFGLVDEMKQVYMEM-LEDKVCPNIYTYNKMVNGYCK 230

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA---------EYMRERMLS 395
           +G +++A    + +   G+ P   T+  LI G+ +  ++ SA         +  R   ++
Sbjct: 231 VGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVA 290

Query: 396 FGYL--------------------------PDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           + +L                          P V T++ LI   C + + ++ L L  EM+
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K + PN++T+T+LI++LC + +L  AR  L Q+    L+P    YN +I+G+CK G ++
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  +V  ME +  +P+  T+  LI G+C K  + +A+ + NKML     PD +T NSLI
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
               + G  + A+R++   + D+ L    W
Sbjct: 470 DGQCRSGNFDSAYRLLSLMN-DRGLVPDPW 498



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 184/411 (44%), Gaps = 20/411 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ SLC+    +    +FD +     +PN  M    +    +AGK + A  +L + 
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ++  +N+L++ L       EA  + ++  ++  QP   T  ILI  L + G+ 
Sbjct: 559 LSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDF 618

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+  F  M S G  PD  TY T I   CR   +    +++ ++K ++  SPD+ TY+S
Sbjct: 619 DHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMK-ENGVSPDLFTYSS 677

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG-----FGKV----------GN 382
           +I GY  LG+ + A  +   M+  G +PS  TF  LI       +GKV           N
Sbjct: 678 LIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSN 737

Query: 383 MVSAEY---MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVY 438
           M+  +    + E+M+  G  P+  ++  L+ G C  G L    K+ D M+ K  +SP+  
Sbjct: 738 MMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSEL 797

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            F  L++  CK  + N+A + +  +     +P+      +I    K G  +    +   +
Sbjct: 798 VFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNL 857

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            +     D++ + I+I G   +G +     +FN M + GC     T + LI
Sbjct: 858 LQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 193/468 (41%), Gaps = 59/468 (12%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN +++  C+  +H ++ V+ + M     LP+       +    R+G  D+A  LLS 
Sbjct: 429 RTYNELIKGYCKRNVHKAMGVL-NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +    + Y S++++L K    +EA  +F    +    P+   +  LI G  + G+
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A      M S  C P+ +T+N LI GLC   ++     LL+E   K +  P V T T
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA-TLLEEKMVKIDLQPTVSTDT 606

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I    K G  D A   + +M S G KP A T+   I  + + G +  AE M  +M   
Sbjct: 607 ILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKEN 666

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN----- 451
           G  PD+ T+SSLI GY   G+ N    +   M      P+ +TF  LI  L +       
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVK 726

Query: 452 -------------RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
                          +     L+++  + + P    Y  ++ G C+ GN+  A  +   M
Sbjct: 727 GGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHM 786

Query: 499 EEKR----------------CKPDK------VTFTILIIGHC--------------MKGR 522
           ++K                 CK +K      V   ++ +GH                KG 
Sbjct: 787 QQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGE 846

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQR 567
                S+F  +L+ G   D++    +I  + K G+     E F +M++
Sbjct: 847 KERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 135/323 (41%), Gaps = 18/323 (5%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            LE   V + L  +  T  +++  L + G  D     F  M S G  P++     F+ + 
Sbjct: 588 LLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTY 647

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            R G+   A+ ++++ +   V+   F Y+SL+         + A  + K       +P  
Sbjct: 648 CREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQ 707

Query: 262 WTFNILIQGL--SRIGEVKKA----------------FEFFYDMGSFGCSPDIVTYNTLI 303
            TF  LI+ L   + G+VK                   E    M   G +P+  +Y  L+
Sbjct: 708 HTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLM 767

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            G+C +  +    ++   ++ K   SP  + + +++S  CKL K ++A  + ++M   G 
Sbjct: 768 LGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGH 827

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   +  +LI    K G       + + +L  GY  D + +  +IDG  + G +    +
Sbjct: 828 LPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYE 887

Query: 424 LCDEMKGKNLSPNVYTFTILINA 446
           L + M+    + +  T+++LI  
Sbjct: 888 LFNVMEKNGCTFSSQTYSLLIEG 910



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/376 (20%), Positives = 146/376 (38%), Gaps = 53/376 (14%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++   C+ G  +   ++ + M S   LPNS      +      GK   A  L  +  
Sbjct: 535 YTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMV 594

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++  +      L++ L+K  + D A   F++     ++PD  T+   IQ   R G ++
Sbjct: 595 KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQ 654

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISG---LCRVNE----VARGHEL------------- 318
            A +    M   G SPD+ TY++LI G   L R N     + R H+              
Sbjct: 655 DAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLI 714

Query: 319 --LKEVKFKS---------------EF---------------SPDVVTYTSVISGYCKLG 346
             L E+K+                 EF               +P+  +Y  ++ G C++G
Sbjct: 715 KHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIG 774

Query: 347 KMDKATGIYNEMNSC-GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            +  A  +++ M    GI PS + FN L+    K+     A  + + M+  G+LP + + 
Sbjct: 775 NLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESC 834

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
             LI    + G+  +G  +   +       +   + I+I+ + K+  +         ++ 
Sbjct: 835 KILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894

Query: 466 NDLVPKPFMYNPVIDG 481
           N        Y+ +I+G
Sbjct: 895 NGCTFSSQTYSLLIEG 910


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 229/481 (47%), Gaps = 68/481 (14%)

Query: 138 LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS---DGHLPNSPMI 194
           +GL+F +    N  L +   TYN ++   C++   D     F ++RS    G  PN    
Sbjct: 1   MGLRFFKEMERNGCLPNVV-TYNTMIDGYCKLKRTDEA---FGFLRSMGLKGLEPNLITF 56

Query: 195 EFFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
              ++   R G+      +L +     + P EVT     YN+L+N   K+ N  +A+ + 
Sbjct: 57  NMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVT-----YNTLVNGYCKEGNFHQALVLH 111

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            E  R    P+  T+  LI  + + G + +A EFF  M   G  P+  TY T+I+G  + 
Sbjct: 112 AEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQ 171

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             +   + +L E+  +S F P +VTY ++I+G+C LG+M++A G+  +M   G+ P  V+
Sbjct: 172 GLLDEAYRVLNEMT-RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVS 230

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG------------------ 411
           ++ +I GF +   +  A  M+  M+    LPD VT+SSLI G                  
Sbjct: 231 YSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290

Query: 412 -----------------YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                            YC+ G LN+ L L DEM  K   P+  T+ +LIN L K+ R  
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVAEME 499
           +ARR L +L ++D +P    YN +I+               GFC  G +DEA+ +   M 
Sbjct: 351 EARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMI 410

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K  KP++  + ++I GHC  G +++A  ++ +M+ +   P  +TV +L+  L   GM  
Sbjct: 411 NKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDG 470

Query: 560 E 560
           E
Sbjct: 471 E 471



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 193/346 (55%), Gaps = 1/346 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN++++   K    DEA    +       +P+  TFN++I GL R G +K+  E   +M 
Sbjct: 21  YNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMS 80

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD VTYNTL++G C+     +   L  E+  ++  SP+VVTYTS+I+  CK G +
Sbjct: 81  RKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM-VRNGLSPNVVTYTSLINSMCKAGNL 139

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++A   +++M+  G+ P+  T+  +I+GF + G +  A  +   M   G++P +VT+++L
Sbjct: 140 NRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNAL 199

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G+C  G++ + + L  +M GK + P+V +++ +I+   +   L+ A +   ++    +
Sbjct: 200 INGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSV 259

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P    Y+ +I G C+   + EA  +  EM   +  PD+ T+T LI  +C +G + +A+ 
Sbjct: 260 LPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALH 319

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           + ++M++ G  PD +T N LI+ L K     EA R++ +   D ++
Sbjct: 320 LHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSI 365



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 137/235 (58%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+VVTY ++I GYCKL + D+A G    M   G++P+ +TFN++I+G  + G +     +
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   GY+PD VT+++L++GYC+ G  +Q L L  EM    LSPNV T+T LIN++CK
Sbjct: 76  LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              LN A  F  Q+    L P    Y  +I+GF + G +DEA  ++ EM      P  VT
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +  LI GHC+ GRM EAI +   M+  G  PD ++ +++IS   +    + AF++
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQM 250



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 188/409 (45%), Gaps = 18/409 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ S+C+ G  +     FD M   G  PN       ++   + G  D A  +L++ 
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YN+L+N        +EA+ + ++       PD  +++ +I G +R  E+
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+   +M      PD VTY++LI GLC    +    ++ +E+    +  PD  TYT+
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEM-LTIKLPPDEFTYTT 303

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+ YCK G ++KA  +++EM   G  P AVT+NVLI+G  K      A  +  ++    
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDD 363

Query: 398 YLPDVVTFSSLID---------------GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
            +P  VT+++LI+               G+C  G +++  ++ + M  KN  PN   + +
Sbjct: 364 SIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNV 423

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I+  C+   +  A +  K++   D VP       ++      G   E N ++ ++  + 
Sbjct: 424 IIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDI-LRS 482

Query: 503 CK-PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           CK  D     +L+  +  +G M    ++  +M + G  P   T  + I+
Sbjct: 483 CKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAIA 531



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 99/173 (57%)

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G LP+VVT++++IDGYC+  + ++       M  K L PN+ TF ++IN LC++ RL + 
Sbjct: 13  GCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKET 72

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L ++     VP    YN +++G+CK GN  +A V+ AEM      P+ VT+T LI  
Sbjct: 73  SEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINS 132

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            C  G +  A+  F++M   G  P++ T  ++I+   + G+ +EA+R++   +
Sbjct: 133 MCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 79/143 (55%)

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
           GL+   EM+     PNV T+  +I+  CK  R ++A  FL+ +    L P    +N +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G C+ G + E + ++ EM  K   PD+VT+  L+ G+C +G   +A+ +  +M+R G +P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 541 DDITVNSLISCLLKGGMPNEAFR 563
           + +T  SLI+ + K G  N A  
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAME 144



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 34/73 (46%)

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EME   C P+ VT+  +I G+C   R  EA      M   G  P+ IT N +I+ L + G
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67

Query: 557 MPNEAFRIMQRAS 569
              E   ++   S
Sbjct: 68  RLKETSEVLVEMS 80


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 204/395 (51%), Gaps = 2/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ SLC+ G+      +F  M   G LP+  +    +    R G+   A     + 
Sbjct: 148 TYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 207

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++   + YNSL++ L +     E  +           PD +TF ILI GL + G+V
Sbjct: 208 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 267

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +    M   G  PDI+TYNTL++GLC V ++    +L + +  +     +V +Y  
Sbjct: 268 GEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG-IKLNVFSYNI 326

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  K+D+A  ++ EM   G+KPS VT+N LI    + G + +A+ +   M + G
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               + T+  L+DG C+NG L + + L   +K     PN+  F+IL++ +C+  +L +A 
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++  N L P    YN +I+G C  G + EA  ++ +MEEK C PD +TF ++I   
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             +  + EAI +  +M     +PD+  V S++ CL
Sbjct: 507 LKENEIHEAIQLLEEMRNRNFSPDE-AVTSMLLCL 540



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 216/417 (51%), Gaps = 15/417 (3%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
            LV     E G+ D+VQ+ FD M   G   ++      ++   +A K   A  L  + + 
Sbjct: 82  TLVKGVWMENGIPDAVQL-FDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMK- 139

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
           G      F Y  ++++L K     EA+ MF E       PD   ++ L+ GL R G +K+
Sbjct: 140 GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKE 199

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF------KSEFSPDVV 333
           A EFF +M   G S D+ TYN+LI GL R         L KEV +         FSPD  
Sbjct: 200 ALEFFKEMEGRGISADVYTYNSLIHGLSRAG-------LWKEVTWFLNLMVDRGFSPDAF 252

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T+T +I G CK GK+ +A  I   M+  G +P  +T+N L++G   VG +  A  + E +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G   +V +++ LI+GYC++ ++++  +L +EM+ K L P+  T+  LI ALC+  R+
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRV 372

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A++   +++      K   Y  ++DG CK G+++EA  +   +++   KP+   F+IL
Sbjct: 373 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSIL 432

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + G C  G++ EA   F+++ + G  PD I  N LI+ L   GM +EA +++ +  E
Sbjct: 433 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 174/343 (50%), Gaps = 2/343 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y  L+N L K      A+ +  E  +   + D +T+ ++I  L + G   +A + F +M 
Sbjct: 115 YGILINGLCKARKTGLAIKL-HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMI 173

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD+V Y++L+ GLCR   +    E  KE++ +   S DV TY S+I G  + G  
Sbjct: 174 GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG-ISADVYTYNSLIHGLSRAGLW 232

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            + T   N M   G  P A TF +LIDG  K G +  A+ + E M   G  PD++T+++L
Sbjct: 233 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTL 292

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ++G C  GQL    KL + +  + +  NV+++ ILIN  CK+ ++++A R  ++++   L
Sbjct: 293 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGL 352

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I   C++G V  A  +  EM+         T+ +L+ G C  G + EAI 
Sbjct: 353 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAID 412

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +F  + +    P+    + L+  + + G   EA++     S++
Sbjct: 413 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 455



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 153/307 (49%), Gaps = 2/307 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PD  T   L++G+     +  A + F +M   G   D  TY  LI+GLC+  +     +
Sbjct: 74  EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L +  K K     DV TY  +I   CK G   +A  +++EM   GI P  V ++ L+DG 
Sbjct: 134 LHE--KMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G +  A    + M   G   DV T++SLI G  R G   +     + M  +  SP+ 
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           +TFTILI+ LCKE ++ +A++ L+ +      P    YN +++G C  G +++A  +   
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           + ++  K +  ++ ILI G+C   ++ EA  +F +M   G  P  +T N+LI  L + G 
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371

Query: 558 PNEAFRI 564
              A ++
Sbjct: 372 VRTAQKL 378



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 127/278 (45%), Gaps = 34/278 (12%)

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV--- 380
            K  F PD VT T+++ G      +  A  +++EM   G+   A T+ +LI+G  K    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 381 -------------------------------GNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
                                          G    A  M   M+  G LPDVV +SSL+
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG CR G+L + L+   EM+G+ +S +VYT+  LI+ L +     +   FL  +      
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P  F +  +IDG CK G V EA  I+  M  K  +PD +T+  L+ G C+ G++ +A  +
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           F  +   G   +  + N LI+   K    +EAFR+ + 
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEE 346



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 1/180 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  S  TYN ++ +LC+ G   + Q +F  M++ G           +    + G  + A 
Sbjct: 352 LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAI 411

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L    +  E   +  +++ LL+ + +    +EA   F E  +   +PDT  +NILI GL
Sbjct: 412 DLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL 471

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              G + +A +  + M   GC PD +T+N +I  L + NE+    +LL+E++ ++ FSPD
Sbjct: 472 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN-FSPD 530


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 205/416 (49%), Gaps = 12/416 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL---L 214
           TYN+++++LC+    D+ + +   M   G +P++      VSS  R GK + A+ L   +
Sbjct: 180 TYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRI 239

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
             F P        +YN+L+N   +++  +E   +F E       PD  T++ +I  LS +
Sbjct: 240 KSFVP--------VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEM 291

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V+ A      M   GCSP++ T+ +L+ G      +    +L   +  +    P+ V 
Sbjct: 292 GNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRM-IQEGSEPNTVA 350

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G C  GKM +A  +  +M   G+ P+  T++ LIDGF K G++V A  +  +M+
Sbjct: 351 YNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMI 410

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           + G LP+VV ++ ++D  CRN   N  L L + M   N  PN  TF   I  LC   +  
Sbjct: 411 TNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTE 470

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + L Q++     P    YN V+DG   A    EA  IV E+EE   K + VT+  ++
Sbjct: 471 WAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTIL 530

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            G C  G    A+ I  K+L  G  PD IT N++I    K G    A +++ R ++
Sbjct: 531 SGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTK 586



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 184/418 (44%), Gaps = 3/418 (0%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           +LG K  E   +++ +      YN ++   C     + V  +F+ M  +G  P+      
Sbjct: 225 RLG-KVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYST 283

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +++    G  + A  +L++      + +   + SL+          EA+ ++    +  
Sbjct: 284 VINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEG 343

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           S+P+T  +N LI GL   G++ +A      M   G  P+  TY+TLI G  +  ++    
Sbjct: 344 SEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           E+  ++   +   P+VV YT ++   C+    + A  +   M +    P+ +TFN  I G
Sbjct: 404 EIWNKM-ITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKG 462

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
               G    A  +  +M  +G  P+V T++ ++DG     +  + L++  E++   +  N
Sbjct: 463 LCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSN 522

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           + T+  +++  C       A +   +L      P    YN VI  +CK G V  A  +V 
Sbjct: 523 LVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVD 582

Query: 497 EMEEK-RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
            + +K    PD  T+T L+ G C    + EA+   +KM+  G  P+  T N+L+  L 
Sbjct: 583 RLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLF 640



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 41/308 (13%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           F I+I    R G  ++A + FY +G FGC P +  YN ++  L            L E K
Sbjct: 111 FVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDAL------------LSENK 158

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
           F+                           GIYN M   GI+ +  T+N+L+    K   +
Sbjct: 159 FQ------------------------MINGIYNNMKRDGIELNVYTYNMLLKALCKNDRV 194

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            +A  +   M   G +PD V++++++   CR G++ +  +L   M+ K+  P    +  L
Sbjct: 195 DAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNAL 249

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           IN  C+E+++ +      ++    + P    Y+ VI+   + GNV+ A  ++A+M  + C
Sbjct: 250 INGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGC 309

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P+  TFT L+ G+ M GR+ EA+ ++N+M++ G  P+ +  N+LI  L   G   EA  
Sbjct: 310 SPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVS 369

Query: 564 IMQRASED 571
           + Q+   +
Sbjct: 370 VSQKMERN 377



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 178/387 (45%), Gaps = 14/387 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+ +L EMG  +    V   M   G  PN       +      G+   A  L ++ 
Sbjct: 280 TYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRM 339

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T  YN+L++ L       EAV + ++  R    P+  T++ LI G ++ G++
Sbjct: 340 IQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDL 399

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E +  M + GC P++V Y  ++  LCR +       L++ +       P+ +T+ +
Sbjct: 400 VGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMA-NGNCPPNTITFNT 458

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I G C  GK + A  + N+M   G  P+  T+N ++DG      + +A+  RE +   G
Sbjct: 459 FIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDG------LFNAKRTREALQIVG 512

Query: 398 YLPD------VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            + +      +VT+++++ G+C  G     L++  ++      P+  T+  +I A CK+ 
Sbjct: 513 EIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQG 572

Query: 452 RLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            +  A + + +L K  +  P  F Y  ++ G C    VDEA V + +M  +   P++ T+
Sbjct: 573 EVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATW 632

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIG 537
             L+ G   K   +  I I + +L  G
Sbjct: 633 NALVRGLFSKLGHLGPIHIVDNILANG 659



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 30/239 (12%)

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
           NS   K + +T+  +I   G   ++   +Y+ + M   G   +   F  +I+ Y R G  
Sbjct: 65  NSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLA 124

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            Q LK    +      P+V  +  +++AL  EN+          +K + +    + YN +
Sbjct: 125 EQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNML 184

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI-------------------------- 512
           +   CK   VD A  ++AEM  K C PD V++T                           
Sbjct: 185 LKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVP 244

Query: 513 ----LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
               LI G C + +M E   +FN+M   G  PD IT +++I+ L + G    A  ++ +
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAK 303


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 224/454 (49%), Gaps = 71/454 (15%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   ++EF  F+ S  +  +      L +Q     VT + +  N L+N L + N+ D +V
Sbjct: 89  PRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSV 148

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  + F+L   PD  TFN LI GL   G++K+A E F +M   G  P++++Y T+I+GL
Sbjct: 149 SVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGL 208

Query: 307 CRVNEVARGHELLKEVK-----------------------------FKSE-----FSPDV 332
           C+    +   ++ K+++                             F SE       P+V
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY S++ G+C LG++++AT ++ EM    + P+ VTF +L+DG  K G +  A  + E 
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PD+ T+++L+DGYC    +N+  K+ + M  K  +P  +++ ILIN  CK  R
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPV---------------------------------- 478
           +++A+  L ++    L P    Y+ +                                  
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448

Query: 479 -IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            +DGFCK G++DEA  ++  M+EK+ +P+ V +TILI G  + G++  A  +F+K+   G
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG 508

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             PD  T   +I  LLK G+ +EA+ + ++  +D
Sbjct: 509 TRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 542



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 171/320 (53%), Gaps = 1/320 (0%)

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            D+A+  F    R+  +P    F   +   ++  +          M  F  + ++ + N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI+ LCR+N V     +L ++ FK    PD +T+ ++I+G C  GK+ +A  ++NEM   
Sbjct: 134 LINCLCRLNHVDFSVSVLGKM-FKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKR 192

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G +P+ +++  +I+G  K GN   A  + ++M   G  P+VVT+S++ID  C++  +N  
Sbjct: 193 GHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDA 252

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           ++   EM  + + PNV+T+  +++  C   +LN+A R  K++   D++P    +  ++DG
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G V EA ++   M EK  +PD  T+  L+ G+C++  M EA  +F  M+R GCAP 
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372

Query: 542 DITVNSLISCLLKGGMPNEA 561
             + N LI+   K    +EA
Sbjct: 373 AHSYNILINGYCKSRRMDEA 392



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 209/435 (48%), Gaps = 2/435 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC  G       +F+ M   GH PN       ++   + G    A  +  + 
Sbjct: 165 TFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y++++++L K    ++A+    E       P+ +T+N ++ G   +G++
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M      P+ VT+  L+ GLC+   V+    L+ E   +    PD+ TY +
Sbjct: 285 NEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA-RLVFETMTEKGVEPDISTYNA 343

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC    M++A  ++  M   G  P A ++N+LI+G+ K   M  A+ +   M    
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+S+L+ G C+ G+  + L L  EM      PN+ T+ IL++  CK   L++A 
Sbjct: 404 LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEAL 463

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + LK +K   L P    Y  +I+G   AG ++ A  + +++     +PD  T+T++I G 
Sbjct: 464 KLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM-QRASEDQNLQL 576
             +G   EA  +F KM   G  P+  + N +I   L+    + A R++ +   +  ++ L
Sbjct: 524 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNL 583

Query: 577 PSWKKAVPLRTNTDI 591
            +++  + L +  +I
Sbjct: 584 STFQMLLDLESQDEI 598



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 93/179 (51%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RM+     P VV F   +  + +  Q +  + LC++M    ++ NVY+  ILIN LC+ N
Sbjct: 83  RMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLN 142

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            ++ +   L ++    + P    +N +I+G C  G + EA  +  EM ++  +P+ +++T
Sbjct: 143 HVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYT 202

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +I G C  G    A+ +F KM + GC P+ +T +++I  L K  + N+A   +    E
Sbjct: 203 TVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVE 261



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 2/221 (0%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A   +  M     +PS V F   +  F K     +   +  +M  F    +V + + 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+  CR   ++  + +  +M    + P+  TF  LIN LC E ++ +A     ++    
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV-EA 526
             P    Y  VI+G CK GN   A  +  +ME+  CKP+ VT++ +I   C K R+V +A
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLC-KDRLVNDA 252

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   ++M+  G  P+  T NS++      G  NEA R+ + 
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKE 293



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 1/189 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +LN    TY+ +M+ LC++G       +F  M S G  PN       +    + G  D A
Sbjct: 403 ALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEA 462

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             LL   +  ++  +   Y  L+  +      + A  +F + F   ++PD  T+ ++I+G
Sbjct: 463 LKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKG 522

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G   +A++ F  M   G  P+  +YN +I G  +  + +    L+ E+  K  FS 
Sbjct: 523 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK-RFSV 581

Query: 331 DVVTYTSVI 339
           ++ T+  ++
Sbjct: 582 NLSTFQMLL 590


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 215/416 (51%), Gaps = 3/416 (0%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++ +LC+ G L D+  ++ D M+S G LPN       V    + G    A  ++  
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMD-MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +    + YN L+N L  +   +EA  +  E   L   PD  ++N LI G     +
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +AF+   +M   G  P+ VT+N ++   C+  ++      + +++ +S FSPD VTY 
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME-ESGFSPDCVTYN 422

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I+GYCK G M +A    +EM    +K  +VT N ++    +   +  A  +       
Sbjct: 423 TLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           GY  D V++ +LI GY ++G +++ LKL DEMK K + P+  T+  +I  LC+  +   A
Sbjct: 483 GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L +L  + L+P    YN ++ G+C+ G+V++A     +M E   KPD  T  IL+ G
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            CM+G + +A+ +FN  +  G A D +T N+LI+ L K G  ++AF ++    E +
Sbjct: 603 LCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 234/469 (49%), Gaps = 21/469 (4%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSL---NHSFKTYNLVMRSLCEMGLHDSVQV 177
           LS L+S  +I R   P + + F ++++ NL     N      +L+          D+  +
Sbjct: 54  LSILSSKTLISR---PNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSL 110

Query: 178 VFDYM----RSDGHL-------PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           +  ++    R D HL       P+  +++  + + +++G+   A  +  + +   +  + 
Sbjct: 111 LLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNL 170

Query: 227 FMYNSLLNALVKQNNADEAVY---MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
              N+LLN+LV+  ++    +    F +  +L   P+  TFNI+I G     + K A EF
Sbjct: 171 LTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEF 230

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              MG + CSPD VTYNT++  LC+   +    +LL ++K +    P+  TY  ++ GYC
Sbjct: 231 LNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG-LLPNRNTYNILVYGYC 289

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K+G + +A  +   M    + P   T+N+LI+G    G +  A  +R+ M +   LPDVV
Sbjct: 290 KMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV 349

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           ++++LI+G     ++++  KL +EM  K + PN  T  I++   CKE +++DA   + ++
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           + +   P    YN +I+G+CKAGN+ EA   + EM  K  K D VT   ++   C + ++
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            EA  + +   + G   D+++  +LI    K G  + A ++     E +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 193/429 (44%), Gaps = 24/429 (5%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL L     +YN ++    E         + + M   G  PN+      V    + GK D
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A   +++      +     YN+L+N   K  N  EA     E  R   + D+ T N ++
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           + L R  ++++A++        G   D V+Y TLI G  +   V R  +L  E+K K E 
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK-EI 519

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P  VTY  +I G C+ GK ++A    NE+   G+ P   T+N ++ G+ + G++  A  
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
              +M+   + PDV T + L+ G C  G L + LKL +    K  + +  T+  LI +LC
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK- 507
           KE RL+DA   L +++  +L P  + YN +I     +G + EA   +++M EK   PD+ 
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699

Query: 508 ----------------------VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
                                 V ++  I   C +G+  +A+ IF +  + G   D  T 
Sbjct: 700 LQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTY 759

Query: 546 NSLISCLLK 554
            +L+  L+K
Sbjct: 760 INLMDGLIK 768



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 15/341 (4%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  R N+ ++    T N ++R+LC     +    +    R  G+  +       +    +
Sbjct: 443 EMGRKNMKMDSV--TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G  D A  L  + +  E+  ST  YN ++  L +    ++A+    E       PD  T
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N ++ G  R G+V+KAF+F   M      PD+ T N L+ GLC    + +  +L     
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWV 620

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K + + D VTY ++I+  CK G++D A  + +EM    + P   T+N +I      G +
Sbjct: 621 SKGK-AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             AE    +ML  G LPD V             QL++   +      +    +   ++  
Sbjct: 680 REAEEFMSKMLEKGNLPDQVL------------QLDKNETVVTSETSEESDSSSVAYSEW 727

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
           I  LC E +  DA R   + K   +      Y  ++DG  K
Sbjct: 728 IKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 19/188 (10%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK---------- 449
           P      + I  Y ++GQ +   ++  +MK   L PN+ T   L+N+L +          
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               NDA +         +VP    +N VI G+C      +A   +  M +  C PD VT
Sbjct: 193 REAFNDAIKL-------GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVT 245

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  ++   C KGR+ +A  +   M   G  P+  T N L+    K G   EA  +++  +
Sbjct: 246 YNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305

Query: 570 EDQNLQLP 577
             QN  LP
Sbjct: 306 --QNNLLP 311


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 215/416 (51%), Gaps = 3/416 (0%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++ +LC+ G L D+  ++ D M+S G LPN       V    + G    A  ++  
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMD-MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +    + YN L+N L  +   +EA  +  E   L   PD  ++N LI G     +
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +AF+   +M   G  P+ VT+N ++   C+  ++      + +++ +S FSPD VTY 
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME-ESGFSPDCVTYN 422

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I+GYCK G M +A    +EM    +K  +VT N ++    +   +  A  +       
Sbjct: 423 TLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           GY  D V++ +LI GY ++G +++ LKL DEMK K + P+  T+  +I  LC+  +   A
Sbjct: 483 GYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L +L  + L+P    YN ++ G+C+ G+V++A     +M E   KPD  T  IL+ G
Sbjct: 543 ISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRG 602

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            CM+G + +A+ +FN  +  G A D +T N+LI+ L K G  ++AF ++    E +
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 234/469 (49%), Gaps = 21/469 (4%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSL---NHSFKTYNLVMRSLCEMGLHDSVQV 177
           LS L+S  +I R   P + + F ++++ NL     N      +L+          D+  +
Sbjct: 54  LSILSSKTLISR---PNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDAKSL 110

Query: 178 VFDYM----RSDGHL-------PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           +  ++    R D HL       P+  +++  + + +++G+   A  +  + +   +  + 
Sbjct: 111 LLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNL 170

Query: 227 FMYNSLLNALVKQNNADEAVY---MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
              N+LLN+LV+  ++    +    F +  +L   P+  TFNI+I G     + K A EF
Sbjct: 171 LTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEF 230

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              MG + CSPD VTYNT++  LC+   +    +LL ++K +    P+  TY  ++ GYC
Sbjct: 231 LNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG-LLPNRNTYNILVYGYC 289

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K+G + +A  +   M    + P   T+N+LI+G    G +  A  +R+ M +   LPDVV
Sbjct: 290 KMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV 349

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           ++++LI+G     ++++  KL +EM  K + PN  T  I++   CKE +++DA   + ++
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           + +   P    YN +I+G+CKAGN+ EA   + EM  K  K D VT   ++   C + ++
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            EA  + +   + G   D+++  +LI    K G  + A ++     E +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 182/386 (47%), Gaps = 1/386 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  +    + D M +   LP+       ++ C+   K   A  LL + 
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   +N ++    K+   D+A     +       PD  T+N LI G  + G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF    +MG      D VT NT++  LCR  ++   ++LL   + +  F  D V+Y +
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFI-DEVSYGT 493

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY K G +D+A  +++EM    I PS VT+N +I G  + G    A      +L  G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD  T+++++ GYCR G + +  +  ++M   +  P+V+T  IL+  LC E  L  A 
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +                YN +I   CK G +D+A  +++EMEEK   PD  T+  +I   
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDI 543
              GR+ EA    +KML  G  P  +
Sbjct: 674 TDSGRIREAEEFMSKMLEKGXLPXQV 699



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 192/429 (44%), Gaps = 24/429 (5%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL L     +YN ++    E         + + M   G  PN+      V    + GK D
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A   +++      +     YN+L+N   K  N  EA     E  R   + D+ T N ++
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           + L R  ++++A++        G   D V+Y TLI G  +   V R  +L  E+K K E 
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK-EI 519

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P  VTY  +I G C+ GK ++A    NE+   G+ P   T+N ++ G+ + G++  A  
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
              +M+   + PDV T + L+ G C  G L + LKL +    K  + +  T+  LI +LC
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK- 507
           KE RL+DA   L +++  +L P  + YN +I     +G + EA   +++M EK   P + 
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699

Query: 508 ----------------------VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
                                 V ++  I   C +G+  +A+ IF +  + G   D  T 
Sbjct: 700 LQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTY 759

Query: 546 NSLISCLLK 554
            +L+  L+K
Sbjct: 760 INLMDGLIK 768



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 141/341 (41%), Gaps = 15/341 (4%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  R N+ ++    T N ++R+LC     +    +    R  G+  +       +    +
Sbjct: 443 EMGRKNMKMDSV--TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G  D A  L  + +  E+  ST  YN ++  L +    ++A+    E       PD  T
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N ++ G  R G+V+KAF+F   M      PD+ T N L+ GLC    + +  +L     
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWV 620

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K + + D VTY ++I+  CK G++D A  + +EM    + P   T+N +I      G +
Sbjct: 621 SKGK-AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             AE    +ML  G LP  V             QL+    +      +    +   ++  
Sbjct: 680 REAEEFMSKMLEKGXLPXQVL------------QLDXNETVVTSETSEESDSSSVAYSEW 727

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
           I  LC E +  DA R   + K   +      Y  ++DG  K
Sbjct: 728 IKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 120/295 (40%), Gaps = 48/295 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G  +      + +   G LP+                           
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPD--------------------------- 557

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E T     YN++L+   ++ + ++A     +      +PD +T NIL++GL   G +
Sbjct: 558 ---ETT-----YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGML 609

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA + F    S G + D VTYNTLI+ LC+   +     LL E++ K E  PD  TY +
Sbjct: 610 EKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK-ELGPDHYTYNA 668

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+     G++ +A    ++M   G  P  V              +   E +     S  
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGXLPXQVL------------QLDXNETVVTSETSEE 716

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
                V +S  I   C  G+    +++  E K K ++ +  T+  L++ L K  +
Sbjct: 717 SDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 19/188 (10%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK---------- 449
           P      + I  Y ++GQ +   ++  +MK   L PN+ T   L+N+L +          
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               NDA +         +VP    +N VI G+C      +A   +  M +  C PD VT
Sbjct: 193 REAFNDAIKL-------GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVT 245

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  ++   C KGR+ +A  +   M   G  P+  T N L+    K G   EA  +++  +
Sbjct: 246 YNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305

Query: 570 EDQNLQLP 577
             QN  LP
Sbjct: 306 --QNNLLP 311


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 215/417 (51%), Gaps = 15/417 (3%)

Query: 160  NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
             LV     E G+ D+VQ+ FD M   G L ++      ++   +A K   A  L  + + 
Sbjct: 1021 TLVKGVWMENGIPDAVQL-FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMK- 1078

Query: 220  GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
            G      F Y  +++AL K     EA+ MF E       PD   ++ L+ GL R G +K+
Sbjct: 1079 GNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKE 1138

Query: 280  AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF------KSEFSPDVV 333
            A EFF +M   G S D+ TYN+LI GL R         L KEV +         FSPD  
Sbjct: 1139 ALEFFKEMEGRGISADVYTYNSLIHGLSRAG-------LWKEVTWFLNLMVDRGFSPDAF 1191

Query: 334  TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            T+T +I G CK GK+ +A  I   M   G +P  +T+N L++G   VG +  A  + E +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251

Query: 394  LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
               G   +V +++ LI+GYC++ ++++  +  +EM+ K L P+  T+  LI ALC+  R+
Sbjct: 1252 ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRV 1311

Query: 454  NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
              A++   +++      K   Y  ++DG CK G+++EA  +   +++   KP+   F+IL
Sbjct: 1312 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSIL 1371

Query: 514  IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            + G C  G++ EA   F+++ + G  PD I  N LI+ L   GM +EA +++ +  E
Sbjct: 1372 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 1428



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/395 (30%), Positives = 203/395 (51%), Gaps = 2/395 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY +++ +LC+ G+      +F  M   G LP+  +    +    R G+   A     + 
Sbjct: 1087 TYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 1146

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                ++   + YNSL++ L +     E  +           PD +TF ILI GL + G+V
Sbjct: 1147 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 1206

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             +A +    M   G  PDI+TYNTL++GLC V ++    +L + +  +     +V +Y  
Sbjct: 1207 GEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG-IKLNVFSYNI 1265

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I+GYCK  K+D+A   + EM   G+KPS VT+N LI    + G + +A+ +   M + G
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
                + T+  L+DG C+NG L + + L   +K     PN+  F+IL++ +C+  +L +A 
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 1385

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            +   ++  N L P    YN +I+G C  G + EA  ++ +MEEK C PD +TF ++I   
Sbjct: 1386 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445

Query: 518  CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              +  + EAI +  +M     +PD+  V S++ CL
Sbjct: 1446 LKENEIHEAIQLLEEMRNRNFSPDE-AVTSMLLCL 1479



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 163/341 (47%), Gaps = 2/341 (0%)

Query: 226  TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            T  +N LL ++ K         M+++   +  QPD +T NILI     +  V   F  F 
Sbjct: 946  TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFG 1005

Query: 286  DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
                 G  PD VT  TL+ G+   N +    +L  E+  K     D  TY  +I+G CK 
Sbjct: 1006 GFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLG-DAKTYGILINGLCKA 1064

Query: 346  GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
             K   A  ++ +M     K    T+ ++ID   K G    A  M   M+  G LPDVV +
Sbjct: 1065 RKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY 1123

Query: 406  SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
            SSL+DG CR G+L + L+   EM+G+ +S +VYT+  LI+ L +     +   FL  +  
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183

Query: 466  NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
                P  F +  +IDG CK G V EA  I+  M  K  +PD +T+  L+ G C+ G++ +
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243

Query: 526  AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            A  +F  +   G   +  + N LI+   K    +EAFR  +
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFE 1284



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 135/324 (41%), Gaps = 37/324 (11%)

Query: 243  DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            ++A+ +F         P T TFN L+  ++++G     F  +  +   G  PD+ T N L
Sbjct: 928  NDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNIL 987

Query: 303  ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                                                I   C L  +    G++      G
Sbjct: 988  ------------------------------------IHCCCSLRAVGCGFGVFGGFLKRG 1011

Query: 363  IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             +P AVT   L+ G      +  A  + + M   G L D  T+  LI+G C+  +    +
Sbjct: 1012 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAI 1071

Query: 423  KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            KL ++MKG N   +V+T+ ++I+ALCK+    +A     ++    ++P   +Y+ ++DG 
Sbjct: 1072 KLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 1130

Query: 483  CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            C+ G + EA     EME +    D  T+  LI G    G   E     N M+  G +PD 
Sbjct: 1131 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 1190

Query: 543  ITVNSLISCLLKGGMPNEAFRIMQ 566
             T   LI  L K G   EA +I++
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILE 1214



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 2/193 (1%)

Query: 139  GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
              +F E  R    L  S  TYN ++ +LC+ G   + Q +F  M++ G           +
Sbjct: 1279 AFRFFEEMRPK-GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337

Query: 199  SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
                + G  + A  L    +  E   +  +++ LL+ + +    +EA   F E  +   +
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397

Query: 259  PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            PDT  +NILI GL   G + +A +  + M   GC PD +T+N +I  L + NE+    +L
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457

Query: 319  LKEVKFKSEFSPD 331
            L+E++ ++ FSPD
Sbjct: 1458 LEEMRNRN-FSPD 1469


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 213/431 (49%), Gaps = 1/431 (0%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           + F +++   +  NH   +YN ++  L + G  D V   ++ M   G +PN+    + + 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           S  +A + + A+ +         + + F Y+ L+  L +    DEA  +  E      QP
Sbjct: 61  SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +  T+  L+ GL ++G++K+A + F  M   GC PD V YN LI G  +  ++   + L 
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  K    P V TY S++SG+ + G+  +   ++ +M   G  P+  TFN L+DGF K
Sbjct: 181 EEMLEKGCI-PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           +G+MV A  +   M S G  PDVV++++L+ G C  G+ ++  +L  EM    + P++ +
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + ILI+   K   L+ A +   ++  + L P  F Y+ +ID  C+AG V  A V+  +M 
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
                PD      L+IG C   R+ E+  +F  M++  C P     N L+  L K    +
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419

Query: 560 EAFRIMQRASE 570
           +   I    +E
Sbjct: 420 DVCEIFHELTE 430



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 192/384 (50%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++RSLC+    +  + VF  M + G  PN       ++   R  K D A  LL++ 
Sbjct: 54  TYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM 113

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G    +   Y SLL+ L K     EAV +F         PD   +N+LI G S+ G++
Sbjct: 114 IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDM 173

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+  F +M   GC P + TYN+L+SG  R  E  R   L K++  +    P++ T+ +
Sbjct: 174 GEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM-LRQGCVPNIFTFNN 232

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+CK+G M +A  ++ EM S G  P  V++N L+ G    G    A+ +   M+  G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG 292

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V+++ LIDGY ++G L+  +KL  E+    L P+ ++++ +I+ LC+  ++  A 
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +  N   P   +  P++ G C+   + E+  +   M +  C P    + +L+   
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKL 412

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
           C   R  +   IF+++   G +PD
Sbjct: 413 CKAKRSDDVCEIFHELTERGFSPD 436


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 232/482 (48%), Gaps = 10/482 (2%)

Query: 85  VNYRCSNEF-WFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFL 143
           VN  C N F    ++ C  +LR  +  DT   ++C  L   N      R D+     +  
Sbjct: 135 VNALCKNGFVQAAEMFCCKVLRLGFGLDT---HVCTSLVLANC-----RRDDLGEAFRVF 186

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E      S   +  TY++++  LCE G  +    +   M   G  P++      + +   
Sbjct: 187 EKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCD 246

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G  D A  +L +        +   Y  L++ L ++   +EA  +F++  +    P   T
Sbjct: 247 IGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIIT 306

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN LI G  + G V  AF+    M    C P+I TYN L+ GLCRV++  +   LL+ V 
Sbjct: 307 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV- 365

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             +   PD VTY  ++ G+CK G+++ A  I+N MNS G++P   TF  LIDG  K+G +
Sbjct: 366 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 425

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +   M+  G   D VTF++LIDG+C+ G+      L + M         +TF   
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 485

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           ++AL K+ +LN+A   L ++    LVP    +  +I+G C+AG    +  ++  M++  C
Sbjct: 486 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 545

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P+  T+TI+I G C  GR+ EA +I   M   G +P+  T   L+   +K G  + AF+
Sbjct: 546 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 605

Query: 564 IM 565
           I+
Sbjct: 606 IV 607



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 191/407 (46%), Gaps = 36/407 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +TY +++++ C++G+ D    + D M +   +PN       +    R GK + A G+ 
Sbjct: 233 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 292

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +      +N+L+N   K+     A  +     +   +P+  T+N L++GL R+
Sbjct: 293 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 352

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +  KAF     +   G  PD VTYN L+ G C+  ++     +   +   +   PD  T
Sbjct: 353 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN-SAGLEPDGFT 411

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG----------NMV 384
           +T++I G CKLG++++A GI   M   GI    VTF  LIDG  K+G          NMV
Sbjct: 412 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 471

Query: 385 S-------------------------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                                     A  M  +M+ +G +P VVT + LI+G+CR G+  
Sbjct: 472 ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETA 531

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             LK+ + MK    SPNVYT+TI+IN LC   R+ +A   L  +    + P  F Y  ++
Sbjct: 532 LSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLV 591

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
               KAG +D A  IV+ M +  C+P+   ++ L+ G  +    + A
Sbjct: 592 KAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 638



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 210/470 (44%), Gaps = 41/470 (8%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQV-VFDYMRSDGHLPN 190
            KL + F+ F      +N  F      Y  V+ +LC+ G   + ++     +R    L  
Sbjct: 104 AKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDT 163

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                  +++C R    +A +      +      ++  Y+ L++ L +    +EA  + +
Sbjct: 164 HVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQ 223

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E      QP T T+ +LI+    IG   KA +   +M +  C P++ TY  LI  LCR  
Sbjct: 224 EMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREG 283

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           ++   + + +++  K    P ++T+ ++I+GYCK G +  A  + + M     KP+  T+
Sbjct: 284 KIEEANGVFRKM-LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTY 342

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N L++G  +V     A  +  R++  G LPD VT++ L+DG+C+ GQLN    + + M  
Sbjct: 343 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 402

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG---- 486
             L P+ +TFT LI+ LCK  RL  A   L  +    +      +  +IDG CK G    
Sbjct: 403 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 462

Query: 487 -------------------------------NVDEANVIVAEMEEKRCKPDKVTFTILII 515
                                           ++EAN ++ +M +    P  VT TILI 
Sbjct: 463 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIE 522

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           GHC  G    ++ +  +M + GC+P+  T   +I+ L   G   EA  I+
Sbjct: 523 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 572



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 171/347 (49%), Gaps = 2/347 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y +++NAL K      A     +  RL    DT     L+    R  ++ +AF  F  M 
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 190

Query: 289 -SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
               C P+ VTY+ LI GLC    +    +L +E+  K    P   TYT +I   C +G 
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG-CQPSTRTYTVLIKAKCDIGM 249

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            DKA  + +EM +    P+  T+ +LID   + G +  A  +  +ML  G  P ++TF++
Sbjct: 250 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 309

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+GYC+ G +    +L   M+  N  PN+ T+  L+  LC+ ++   A   L+++  N 
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L+P    YN ++DGFCK G ++ A  I   M     +PD  TFT LI G C  GR+ +A 
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 429

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            I   M++ G + D++T  +LI    K G   +   + +   E++ L
Sbjct: 430 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 476



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 190/434 (43%), Gaps = 40/434 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G  +    +F+ M S G  P+       +    + G+ + A G+L   
Sbjct: 376 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 435

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +++    + +L++   K   A +  ++F+            TFN  +  L +  ++
Sbjct: 436 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 495

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M  +G  P +VT+  LI G CR  E A   ++L+ +K ++  SP+V TYT 
Sbjct: 496 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK-QAGCSPNVYTYTI 554

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C  G++++A  I   M+S G+ P+  T+ VL+    K G +  A  +   M+  G
Sbjct: 555 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 614

Query: 398 YLPDVVTFSSLIDGYC-------------------------------------RNGQLNQ 420
             P+   +S+L+ G+                                      R   ++ 
Sbjct: 615 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDH 674

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            LK+ DE+K K   P    +  L+  LCKE R+ +A +  + +  + L P   + + +I+
Sbjct: 675 ALKIRDEIK-KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIE 732

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            +CK    D     +  + + +  P   ++  +I G   +GR+ EA  + + ++R     
Sbjct: 733 HYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIE 792

Query: 541 DDITVNSLISCLLK 554
           +++ V   I  L+K
Sbjct: 793 EEVEVTPSIEFLMK 806



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 176/398 (44%), Gaps = 7/398 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN +M  LC +       ++   +  +G LP+       V    + G+ + A  + 
Sbjct: 338 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF 397

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +      +    F + +L++ L K    ++A  +     +     D  TF  LI G  +I
Sbjct: 398 NSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 457

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+ K     F +M    C     T+N  +  L +  ++   + +L ++  K    P VVT
Sbjct: 458 GKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM-MKYGLVPSVVT 516

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +T +I G+C+ G+   +  +   M   G  P+  T+ ++I+G    G +  AE +   M 
Sbjct: 517 HTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMS 576

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           SFG  P+  T++ L+  + + G+L++  ++   M      PN + ++ L++     N   
Sbjct: 577 SFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAI 636

Query: 455 DARRF--LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK-PDKVTFT 511
            AR       L    L  +    N +     +  +VD A  I  E+  K+C  P +  + 
Sbjct: 637 GARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEI--KKCGVPTEDLYN 694

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            L++G C +GR++EA  +   M++ G  PD   ++S+I
Sbjct: 695 FLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSII 731



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 1/232 (0%)

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y++++    KL     A  +Y  M + G     + +  +++   K G + +AE    ++L
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRL 453
             G+  D    +SL+   CR   L +  ++ ++M K ++  PN  T++ILI+ LC+  RL
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A +  +++      P    Y  +I   C  G  D+A  ++ EM  K C P+  T+TIL
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I   C +G++ EA  +F KML+ G  P  IT N+LI+   K G    AF+++
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 327


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 237/484 (48%), Gaps = 14/484 (2%)

Query: 85  VNYRCSNEF-WFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFL 143
           VN  C N F    ++ C  +LR  +  DT   ++C  L   N      R D+  LG  F 
Sbjct: 201 VNALCKNGFVQAAEMFCCKVLRLGFGLDT---HVCTSLVLANC-----RRDD--LGEAFR 250

Query: 144 EFSRVNLSLN--HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            F +++   N   +  TY++++  LCE G  +    +   M   G  P++      + + 
Sbjct: 251 VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 310

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G  D A  +L +        +   Y  L++ L ++   +EA  +F++  +    P  
Sbjct: 311 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 370

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TFN LI G  + G V  AF+    M    C P+I TYN L+ GLCRV++  +   LL+ 
Sbjct: 371 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 430

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           V   +   PD VTY  ++ G+CK G+++ A  I+N MNS G++P   TF  LIDG  K+G
Sbjct: 431 V-VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG 489

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +   M+  G   D VTF++LIDG+C+ G+      L + M         +TF 
Sbjct: 490 RLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFN 549

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
             ++AL K+ +LN+A   L ++    LVP    +  +I+G C+AG    +  ++  M++ 
Sbjct: 550 CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQA 609

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C P+  T+TI+I G C  GR+ EA +I   M   G +P+  T   L+   +K G  + A
Sbjct: 610 GCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 669

Query: 562 FRIM 565
           F+I+
Sbjct: 670 FQIV 673



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 191/407 (46%), Gaps = 36/407 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +TY +++++ C++G+ D    + D M +   +PN       +    R GK + A G+ 
Sbjct: 299 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 358

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +      +N+L+N   K+     A  +     +   +P+  T+N L++GL R+
Sbjct: 359 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 418

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +  KAF     +   G  PD VTYN L+ G C+  ++     +   +   +   PD  T
Sbjct: 419 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN-SAGLEPDGFT 477

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG----------NMV 384
           +T++I G CKLG++++A GI   M   GI    VTF  LIDG  K+G          NMV
Sbjct: 478 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 537

Query: 385 S-------------------------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                                     A  M  +M+ +G +P VVT + LI+G+CR G+  
Sbjct: 538 ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETA 597

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             LK+ + MK    SPNVYT+TI+IN LC   R+ +A   L  +    + P  F Y  ++
Sbjct: 598 LSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLV 657

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
               KAG +D A  IV+ M +  C+P+   ++ L+ G  +    + A
Sbjct: 658 KAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 704



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 210/470 (44%), Gaps = 41/470 (8%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQV-VFDYMRSDGHLPN 190
            KL + F+ F      +N  F      Y  V+ +LC+ G   + ++     +R    L  
Sbjct: 170 AKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDT 229

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                  +++C R    +A +      +      ++  Y+ L++ L +    +EA  + +
Sbjct: 230 HVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQ 289

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E      QP T T+ +LI+    IG   KA +   +M +  C P++ TY  LI  LCR  
Sbjct: 290 EMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREG 349

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           ++   + + +++  K    P ++T+ ++I+GYCK G +  A  + + M     KP+  T+
Sbjct: 350 KIEEANGVFRKM-LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTY 408

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N L++G  +V     A  +  R++  G LPD VT++ L+DG+C+ GQLN    + + M  
Sbjct: 409 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 468

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG---- 486
             L P+ +TFT LI+ LCK  RL  A   L  +    +      +  +IDG CK G    
Sbjct: 469 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 528

Query: 487 -------------------------------NVDEANVIVAEMEEKRCKPDKVTFTILII 515
                                           ++EAN ++ +M +    P  VT TILI 
Sbjct: 529 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIE 588

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           GHC  G    ++ +  +M + GC+P+  T   +I+ L   G   EA  I+
Sbjct: 589 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 638



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 171/347 (49%), Gaps = 2/347 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y +++NAL K      A     +  RL    DT     L+    R  ++ +AF  F  M 
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 256

Query: 289 -SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
               C P+ VTY+ LI GLC    +    +L +E+  K    P   TYT +I   C +G 
Sbjct: 257 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG-CQPSTRTYTVLIKAKCDIGM 315

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            DKA  + +EM +    P+  T+ +LID   + G +  A  +  +ML  G  P ++TF++
Sbjct: 316 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 375

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+GYC+ G +    +L   M+  N  PN+ T+  L+  LC+ ++   A   L+++  N 
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L+P    YN ++DGFCK G ++ A  I   M     +PD  TFT LI G C  GR+ +A 
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            I   M++ G + D++T  +LI    K G   +   + +   E++ L
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 542



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/417 (22%), Positives = 188/417 (45%), Gaps = 22/417 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G  +    +F+ M S G  P+       +    + G+ + A G+L   
Sbjct: 442 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 501

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +++    + +L++   K   A +  ++F+            TFN  +  L +  ++
Sbjct: 502 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 561

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M  +G  P +VT+  LI G CR  E A   ++L+ +K ++  SP+V TYT 
Sbjct: 562 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK-QAGCSPNVYTYTI 620

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C  G++++A  I   M+S G+ P+  T+ VL+    K G +  A  +   M+  G
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680

Query: 398 YLPDVVTFSSLIDGYCRNGQL--NQGLKLCDEMKGKNLS------------------PNV 437
             P+   +S+L+ G+  +      + L    ++  ++LS                  P  
Sbjct: 681 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTE 740

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
             +  L+  LCKE R+ +A +  + +  + L P   + + +I+ +CK    D     +  
Sbjct: 741 DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKL 799

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           + + +  P   ++  +I G   +GR+ EA  + + ++R     +++ V   I  L+K
Sbjct: 800 VLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMK 856



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 1/232 (0%)

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y++++    KL     A  +Y  M + G     + +  +++   K G + +AE    ++L
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRL 453
             G+  D    +SL+   CR   L +  ++ ++M K +N  PN  T++ILI+ LC+  RL
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A +  +++      P    Y  +I   C  G  D+A  ++ EM  K C P+  T+TIL
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I   C +G++ EA  +F KML+ G  P  IT N+LI+   K G    AF+++
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 393



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 95/255 (37%), Gaps = 22/255 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T+ +++   C  G       + + M+  G  PN       ++     G+ + A+ +L
Sbjct: 579 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 638

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG--LS 272
                  V+ + F Y  L+ A VK    D A  +     +   QP++  ++ L+ G  LS
Sbjct: 639 FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLS 698

Query: 273 RIGEVKKAFEFFYDMGSFGCS------------------PDIVTYNTLISGLCRVNEVAR 314
                 +A     D+ +   S                  P    YN L+ GLC+   +  
Sbjct: 699 NTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIE 758

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             +L +++  K    PD    +S+I  YCK  K D        +      PS  ++  +I
Sbjct: 759 ADQLTQDM-VKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVI 816

Query: 375 DGFGKVGNMVSAEYM 389
            G    G +  A+ +
Sbjct: 817 HGLRNEGRVQEAQKL 831


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 206/408 (50%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+R+LC  G       V D M   G  P  PM    + +  R G   +A  +L   
Sbjct: 124 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +     N +LNA+  Q + DEA+++ ++      +PD  ++N +++GL      
Sbjct: 184 HARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW 243

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               E   +M    C P+IVT+NTLIS LCR     R HE+L ++  +   +PD+  Y +
Sbjct: 244 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM-VEHGCTPDIRMYAT 302

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G ++ A  I N M S G+KP+ V +N L+ G          E +   M    
Sbjct: 303 IIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D VTF+ L+D +C+NG +++ ++L ++M  +   P+V T+T +IN  CKE  +++A 
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAV 422

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK +      P    Y  V+ G C A    +A  ++++M ++ C  + +TF  LI   
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C KG + +AI +  +ML  GC+PD I+ +++I  L K G  +EA  ++
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 530



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 186/390 (47%), Gaps = 1/390 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V ++   +  T+N ++  LC  GL + V  V   M   G  P+  M    +    + G  
Sbjct: 254 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHL 313

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  +L++     +  +   YN+LL  L      +E   +  E F      D  TFNIL
Sbjct: 314 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +    + G V +  E    M   GC PD++TY T+I+G C+   +     LLK +     
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT-ACG 432

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ ++YT V+ G C   +   A  + ++M   G   + +TFN LI+   K G +  A 
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + ++ML  G  PD++++S++IDG  + G+ ++ L+L + M  K +SPN   ++ + +AL
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            +E R+N   +    ++   +     +YN VI   CK G  + A   +A M    C P++
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            T+TILI G   +G + EA  +  ++   G
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 195/406 (48%), Gaps = 39/406 (9%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            V+   RAG+ ++A+ L +      V  + + Y  ++ AL  +    +A+ +  E  R  
Sbjct: 96  MVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS----------------------- 293
             P    ++++++   R G  + A     D+ + GC+                       
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212

Query: 294 ------------PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                       PD+V+YN ++ GLC         EL++E+  +    P++VT+ ++IS 
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISY 271

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C+ G  ++   +  +M   G  P    +  +IDG  K G++  A  +  RM S+G  P+
Sbjct: 272 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 331

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VV +++L+ G C   +  +  +L  EM  K+   +  TF IL++  C+   ++     L+
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 391

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q+     +P    Y  VI+GFCK G +DEA +++  M    CKP+ +++TI++ G C   
Sbjct: 392 QMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 451

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           R V+A  + ++M++ GC  + IT N+LI+ L K G+  +A  ++++
Sbjct: 452 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V++ LC       VQ + + M      PN       +S   R G  +    +L+Q 
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T    MY ++++ + K+ + + A  +         +P+   +N L++GL      
Sbjct: 289 VEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 348

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++  E   +M    C  D VT+N L+   C+   V R  ELL+++  +    PDV+TYT+
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LERGCMPDVITYTT 407

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M +CG KP+ +++ +++ G       V AE +  +M+  G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + +TF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K  + ++A 
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +     + G +++   +   +++   + D V +  +I   
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +G    AI     M+  GC P++ T   LI  L   G   EA  ++
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 14/287 (4%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YN +++G CR  ++     L   V       P+  TY  V+   C  G++  A  + +EM
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVP----PNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G  P    ++V+++   + G   SA  + E + + G   DV   + +++  C  G +
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++ L L  ++      P+V ++  ++  LC   R    +  ++++      P    +N +
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I   C+ G  +  + ++A+M E  C PD   +  +I G C +G +  A  I N+M   G 
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
            P+ +  N+L+  L             +R  E + L    + K  PL
Sbjct: 329 KPNVVCYNTLLKGLCSA----------ERWEETEELLAEMFDKDCPL 365



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 7/245 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ GL D   ++   M + G  PN+      +     A +   A+ L+SQ 
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++   +N+L+N L K+   ++A+ + K+       PD  +++ +I GL + G+ 
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 523

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
            +A E    M + G SP+ + Y+++ S L R   +N+V +  + +++   +S    D V 
Sbjct: 524 DEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRS----DAVL 579

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +VIS  CK G+ ++A      M S G  P+  T+ +LI G    G +  A+ M   + 
Sbjct: 580 YNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELC 639

Query: 395 SFGYL 399
           S G L
Sbjct: 640 SKGAL 644



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ GL +    +   M  +G  P+       +    +AGK D A  LL+  
Sbjct: 474 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +T +Y+S+ +AL ++   ++ + MF        + D   +N +I  L + GE 
Sbjct: 534 VNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET 593

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A EF   M S GC P+  TY  LI GL     V    E+L E+  K      ++ +  
Sbjct: 594 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFG 653

Query: 338 VI 339
           ++
Sbjct: 654 IV 655


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 180/314 (57%), Gaps = 4/314 (1%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P   T+N LI GL +     +A++   +M   GC PDI TY TLI+G C+  +      +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGF 377
            +++  +  F PDVVTY+ +I G CK G++ +A  ++  M   G   P+ VT+N LI GF
Sbjct: 112 FEQLVARG-FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            ++G M  A  + ERM   G  PDVVT+++L++G+C+  +L+    L ++M  K L+PNV
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            TFT L++ LC+ENRL+DA   L +++     P  + YN ++DG+C+   ++EA   +  
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM-- 288

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           +EE  C P+ V+F I+I G C   R  EA+ +  +  R  C PD +   ++I  L +   
Sbjct: 289 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348

Query: 558 PNEAFRIMQRASED 571
            +EA R+ ++  E+
Sbjct: 349 VDEACRVYRKMLEE 362



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 181/339 (53%), Gaps = 3/339 (0%)

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           +G  +  +  E   +   YNSL++ L K   A EA  + +E       PD +T+  LI G
Sbjct: 39  RGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 98

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             +  +   A   F  + + G  PD+VTY+ LI GLC+   +    +L   +       P
Sbjct: 99  FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 158

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           + VTY S+ISG+C++GKMD+A  +   M   G  P  VT+  L++GF K+  +  A  + 
Sbjct: 159 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 218

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            +M   G  P+VVTF+SL+DG CR  +L+  + +  EM+ K+ SP VYT+  +++  C+ 
Sbjct: 219 NQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRV 278

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           N+L +AR+F+  L+  D  P    +N +I G CK     EA  +V E   +RC PD V +
Sbjct: 279 NQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMY 336

Query: 511 TILIIGHCMKGRMVEAISIFNKML-RIGCAPDDITVNSL 548
           T +I   C + ++ EA  ++ KML   GC P+ IT ++ 
Sbjct: 337 TTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 178/328 (54%), Gaps = 7/328 (2%)

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
            +P +      +S   +A +   A  LL +          F Y +L+    K   +D+A+
Sbjct: 50  EVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDAL 109

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLISG 305
            +F++      +PD  T++ LI GL + G +K+A + F  M   G C P+ VTYN+LISG
Sbjct: 110 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 169

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
            CR+ ++     LL+ +  ++  SPDVVTYT++++G+CKL ++D A  + N+M   G+ P
Sbjct: 170 FCRMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK-L 424
           + VTF  L+DG  +   +  A ++   M      P V T+++++DGYCR  QL +  K +
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM 288

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +EM   +  PNV +F I+I  LCK NR ++A   +++ +     P   MY  VID  C+
Sbjct: 289 LEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCR 345

Query: 485 AGNVDEANVIVAEM-EEKRCKPDKVTFT 511
              VDEA  +  +M EE  C P+ +T++
Sbjct: 346 EKKVDEACRVYRKMLEEPGCLPNSITYS 373



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 1/241 (0%)

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +E  P  VTY S+ISG CK  +  +A  +  EM   G  P   T+  LI GF K      
Sbjct: 48  AEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDD 107

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILI 444
           A  + E++++ G+ PDVVT+S LIDG C+ G+L + + L   M K  +  PN  T+  LI
Sbjct: 108 ALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 167

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +  C+  ++++A   L+++      P    Y  +++GFCK   +D+A  ++ +M  K   
Sbjct: 168 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 227

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P+ VTFT L+ G C + R+ +A+ I  +M R  C+P   T N+++    +     EA + 
Sbjct: 228 PNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF 287

Query: 565 M 565
           M
Sbjct: 288 M 288



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY+ ++  LC+ G L +++ +    ++S   +PN+      +S   R GK D A  LL +
Sbjct: 126 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 185

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 +     Y +L+N   K    D+A  +  +  R    P+  TF  L+ GL R   
Sbjct: 186 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR 245

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A     +M    CSP + TYNT++ G CRVN++    + + E   + +  P+VV++ 
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE---EMDCPPNVVSFN 302

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G CK+ +  +A  +  E       P  V +  +ID   +   +  A  +  +ML  
Sbjct: 303 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362

Query: 397 -GYLPDVVTFSSL 408
            G LP+ +T+S+ 
Sbjct: 363 PGCLPNSITYSTF 375



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 93/172 (54%), Gaps = 1/172 (0%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P  VT++SLI G C+  + ++   L +EM      P+++T+T LI   CK  + +DA R
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGH 517
             +QL      P    Y+ +IDG CK G + EA  +   M +   C P+ VT+  LI G 
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           C  G+M EA+++  +M   G +PD +T  +L++   K    ++A+ ++ + +
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT 222


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/439 (31%), Positives = 234/439 (53%), Gaps = 26/439 (5%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSF----KTYNL------------VMRSLCEMGLHDSVQVV 178
           +P L L++  +SR  L++N+S     +  NL            ++ S  +   + S+ ++
Sbjct: 86  DPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLI 145

Query: 179 FDYMR--SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV--TMSTFMYNSLLN 234
           F  +   S     NS + +  V + +   K     GL +  R G+    +S    N LL+
Sbjct: 146 FHSLSVCSGQFCANSIIADMLVLAYVENSK--TVLGLEAFKRAGDYRYKLSVLSCNPLLS 203

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           ALVK+N      +++KE  R    P+  TFN +I GL ++G++ KA +   DM  +G  P
Sbjct: 204 ALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWP 263

Query: 295 DIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           ++VTYNTLI G C   RV ++ +   +LKE+  +++ SP+ VT+  +I G+CK   +  A
Sbjct: 264 NVVTYNTLIDGYCKMGRVGKMYKADAILKEM-VENKVSPNSVTFNVLIDGFCKDENLSAA 322

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++ EM S G+KP+ VT+N L++G    G +  A+ + + MLS    P+V+T+++LI+G
Sbjct: 323 LKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALING 382

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           YC+   L +  +L D +  + L+PNV TF  L++  CK  ++ +A    K +     +P 
Sbjct: 383 YCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPN 442

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I GFC+ G ++E   ++ EM+ +  K D VT+ ILI   C K    +A  + +
Sbjct: 443 ASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLID 502

Query: 532 KMLRIGCAPDDITVNSLIS 550
           +ML  G  P  +T N L++
Sbjct: 503 EMLDKGLKPSHLTYNILLN 521



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 236/465 (50%), Gaps = 8/465 (1%)

Query: 100 CTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRV-NLSLNHSFKT 158
           C++ L    LS  C+   C   S +  + V+  ++N K  L    F R  +     S  +
Sbjct: 140 CSISLIFHSLS-VCSGQFCAN-SIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLS 197

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            N ++ +L +      V+ V+  M      PN       ++   + GK + A  ++   +
Sbjct: 198 CNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMK 257

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADE---AVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                 +   YN+L++   K     +   A  + KE       P++ TFN+LI G  +  
Sbjct: 258 VWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDE 317

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A + F +M S G  P +VTYN+L++GLC   ++     LL E+   S   P+V+TY
Sbjct: 318 NLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM-LSSNLKPNVITY 376

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I+GYCK   +++A  +++ +   G+ P+ +TFN L+ G+ K G M  A  +++ ML 
Sbjct: 377 NALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE 436

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G+LP+  T++ LI G+CR G++ +   L +EM+ + +  +  T+ ILI+A C++     
Sbjct: 437 KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKK 496

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A R + ++    L P    YN +++G+C  GN+  A  +  +ME++    + VT+ +LI 
Sbjct: 497 AARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQ 556

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL-KGGMPN 559
           G+C KG++ +A  + N+ML  G  P+  T   +   ++ KG +P+
Sbjct: 557 GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 20/264 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  +  +V+ D M S    PN       ++   +    + A+ L    
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +   +N+LL+   K    +EA  + K        P+  T+N LI G  R G++
Sbjct: 400 GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKM 459

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++      +M   G   D VTYN LIS  C   E  +   L+ E+  K    P  +TY  
Sbjct: 460 EEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG-LKPSHLTYNI 518

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF-------------------G 378
           +++GYC  G +  A  +  +M   G   + VT+NVLI G+                   G
Sbjct: 519 LLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKG 578

Query: 379 KVGNMVSAEYMRERMLSFGYLPDV 402
            + N  + E ++E M+  G+LPD+
Sbjct: 579 LIPNRTTYEIIKEEMMEKGFLPDI 602


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 237/484 (48%), Gaps = 14/484 (2%)

Query: 85  VNYRCSNEF-WFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFL 143
           VN  C N F    ++ C  +LR  +  DT   ++C  L   N      R D+  LG  F 
Sbjct: 178 VNALCKNGFVQAAEMFCCKVLRLGFGLDT---HVCTSLVLANC-----RRDD--LGEAFR 227

Query: 144 EFSRVNLSLN--HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            F +++   N   +  TY++++  LCE G  +    +   M   G  P++      + + 
Sbjct: 228 VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 287

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G  D A  +L +        +   Y  L++ L ++   +EA  +F++  +    P  
Sbjct: 288 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 347

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TFN LI G  + G V  AF+    M    C P+I TYN L+ GLCRV++  +   LL+ 
Sbjct: 348 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 407

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           V   +   PD VTY  ++ G+CK G+++ A  I+N MNS G++P   TF  LIDG  K+G
Sbjct: 408 V-VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLG 466

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +   M+  G   D VTF++LIDG+C+ G+      L + M         +TF 
Sbjct: 467 RLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFN 526

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
             ++AL K+ +LN+A   L ++    LVP    +  +I+G C+AG    +  ++  M++ 
Sbjct: 527 CFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQA 586

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C P+  T+TI+I G C  GR+ EA +I   M   G +P+  T   L+   +K G  + A
Sbjct: 587 GCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 646

Query: 562 FRIM 565
           F+I+
Sbjct: 647 FQIV 650



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 191/407 (46%), Gaps = 36/407 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +TY +++++ C++G+ D    + D M +   +PN       +    R GK + A G+ 
Sbjct: 276 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 335

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +      +N+L+N   K+     A  +     +   +P+  T+N L++GL R+
Sbjct: 336 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 395

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +  KAF     +   G  PD VTYN L+ G C+  ++     +   +   +   PD  T
Sbjct: 396 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN-SAGLEPDGFT 454

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG----------NMV 384
           +T++I G CKLG++++A GI   M   GI    VTF  LIDG  K+G          NMV
Sbjct: 455 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 514

Query: 385 S-------------------------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                                     A  M  +M+ +G +P VVT + LI+G+CR G+  
Sbjct: 515 ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETA 574

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             LK+ + MK    SPNVYT+TI+IN LC   R+ +A   L  +    + P  F Y  ++
Sbjct: 575 LSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLV 634

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
               KAG +D A  IV+ M +  C+P+   ++ L+ G  +    + A
Sbjct: 635 KAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGA 681



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 210/470 (44%), Gaps = 41/470 (8%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQV-VFDYMRSDGHLPN 190
            KL + F+ F      +N  F      Y  V+ +LC+ G   + ++     +R    L  
Sbjct: 147 AKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDT 206

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                  +++C R    +A +      +      ++  Y+ L++ L +    +EA  + +
Sbjct: 207 HVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQ 266

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E      QP T T+ +LI+    IG   KA +   +M +  C P++ TY  LI  LCR  
Sbjct: 267 EMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREG 326

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           ++   + + +++  K    P ++T+ ++I+GYCK G +  A  + + M     KP+  T+
Sbjct: 327 KIEEANGVFRKM-LKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTY 385

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N L++G  +V     A  +  R++  G LPD VT++ L+DG+C+ GQLN    + + M  
Sbjct: 386 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 445

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG---- 486
             L P+ +TFT LI+ LCK  RL  A   L  +    +      +  +IDG CK G    
Sbjct: 446 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKD 505

Query: 487 -------------------------------NVDEANVIVAEMEEKRCKPDKVTFTILII 515
                                           ++EAN ++ +M +    P  VT TILI 
Sbjct: 506 VCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIE 565

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           GHC  G    ++ +  +M + GC+P+  T   +I+ L   G   EA  I+
Sbjct: 566 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL 615



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 171/347 (49%), Gaps = 2/347 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y +++NAL K      A     +  RL    DT     L+    R  ++ +AF  F  M 
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 233

Query: 289 -SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
               C P+ VTY+ LI GLC    +    +L +E+  K    P   TYT +I   C +G 
Sbjct: 234 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG-CQPSTRTYTVLIKAKCDIGM 292

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            DKA  + +EM +    P+  T+ +LID   + G +  A  +  +ML  G  P ++TF++
Sbjct: 293 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 352

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+GYC+ G +    +L   M+  N  PN+ T+  L+  LC+ ++   A   L+++  N 
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L+P    YN ++DGFCK G ++ A  I   M     +PD  TFT LI G C  GR+ +A 
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            I   M++ G + D++T  +LI    K G   +   + +   E++ L
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCL 519



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 190/434 (43%), Gaps = 40/434 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G  +    +F+ M S G  P+       +    + G+ + A G+L   
Sbjct: 419 TYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSM 478

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +++    + +L++   K   A +  ++F+            TFN  +  L +  ++
Sbjct: 479 VKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKL 538

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M  +G  P +VT+  LI G CR  E A   ++L+ +K ++  SP+V TYT 
Sbjct: 539 NEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK-QAGCSPNVYTYTI 597

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C  G++++A  I   M+S G+ P+  T+ VL+    K G +  A  +   M+  G
Sbjct: 598 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 657

Query: 398 YLPDVVTFSSLIDGYC-------------------------------------RNGQLNQ 420
             P+   +S+L+ G+                                      R   ++ 
Sbjct: 658 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDH 717

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            LK+ DE+K K   P    +  L+  LCKE R+ +A +  + +  + L P   + + +I+
Sbjct: 718 ALKIRDEIK-KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIE 775

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            +CK    D     +  + + +  P   ++  +I G   +GR+ EA  + + ++R     
Sbjct: 776 HYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIE 835

Query: 541 DDITVNSLISCLLK 554
           +++ V   I  L+K
Sbjct: 836 EEVEVTPSIEFLMK 849



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 176/398 (44%), Gaps = 7/398 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN +M  LC +       ++   +  +G LP+       V    + G+ + A  + 
Sbjct: 381 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF 440

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +      +    F + +L++ L K    ++A  +     +     D  TF  LI G  +I
Sbjct: 441 NSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 500

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+ K     F +M    C     T+N  +  L +  ++   + +L ++  K    P VVT
Sbjct: 501 GKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM-MKYGLVPSVVT 559

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +T +I G+C+ G+   +  +   M   G  P+  T+ ++I+G    G +  AE +   M 
Sbjct: 560 HTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMS 619

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           SFG  P+  T++ L+  + + G+L++  ++   M      PN + ++ L++     N   
Sbjct: 620 SFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAI 679

Query: 455 DARRF--LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK-PDKVTFT 511
            AR       L    L  +    N +     +  +VD A  I  E+  K+C  P +  + 
Sbjct: 680 GARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEI--KKCGVPTEDLYN 737

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            L++G C +GR++EA  +   M++ G  PD   ++S+I
Sbjct: 738 FLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSII 774



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 118/232 (50%), Gaps = 1/232 (0%)

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y++++    KL     A  +Y  M + G     + +  +++   K G + +AE    ++L
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRL 453
             G+  D    +SL+   CR   L +  ++ ++M K +N  PN  T++ILI+ LC+  RL
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A +  +++      P    Y  +I   C  G  D+A  ++ EM  K C P+  T+TIL
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I   C +G++ EA  +F KML+ G  P  IT N+LI+   K G    AF+++
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL 370


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 221/437 (50%), Gaps = 23/437 (5%)

Query: 156 FKTYNLVMRSLCEMG------LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+++ S+C  G        +  +  ++ M S G + N   +  F       GK + 
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK 472

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +         T  Y+ ++  L   +  + A ++FKE       PD +T+ ILI 
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
             S+ G +K+A  +  +M   GC P +VTY TLI    +  +V+  +EL + +  K  F 
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCF- 591

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+V+TYT++I GYCK G ++KA  IY  M                N+   KP+ VT+  L
Sbjct: 592 PNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +DG  K   +  A  + E M   G  P+ + + +LIDG+C+  +L++  ++  +M  +  
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY 711

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +PNVYT++ LI+ L K+ RL+   + L ++  N   P   +Y  +IDG  K    DEA  
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYK 771

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++  MEEK CKP+ VT+T +I G    G++ + + +F +M   GCAP+ +T   LI+   
Sbjct: 772 LMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCC 831

Query: 554 KGGMPNEAFRIMQRASE 570
             G  +EA+ +++   +
Sbjct: 832 ATGHLDEAYALLEEMKQ 848



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 198/435 (45%), Gaps = 23/435 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LCE    +      + MRS   +PN       +  C+   +    K +LS   
Sbjct: 311 YNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMI 370

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 S  ++NSL++A  K ++   A  + K+  +   +P    +NILI  +   GE+ 
Sbjct: 371 AEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELP 430

Query: 279 KAFEF------FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
               F      + +M S G   + V   +    LC   +  + ++++ E+   + F PD 
Sbjct: 431 GPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM-MGNGFVPDT 489

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY+ VI   C   +++ A  ++ EM   G+ P   T+ +LID F K G +  A    + 
Sbjct: 490 STYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDE 549

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G  P VVT+++LI  Y +  +++   +L + M  K   PNV T+T LI+  CK   
Sbjct: 550 MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGN 609

Query: 453 LNDARRFLKQLKWNDLVP--------------KP--FMYNPVIDGFCKAGNVDEANVIVA 496
           +  A +   +++ +  +P              KP    Y  ++DG CKA  V +A  ++ 
Sbjct: 610 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 669

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M    C+P+ + +  LI G C   ++ EA  +F+KM+  G  P+  T +SLI  L K  
Sbjct: 670 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDK 729

Query: 557 MPNEAFRIMQRASED 571
             +   +++ +  E+
Sbjct: 730 RLDLVLKVLSKMLEN 744



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 211/502 (42%), Gaps = 47/502 (9%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY--------------- 159
           R   +KL+P   +E++  L +P+L +KF  ++   +  +H+   Y               
Sbjct: 130 RQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRV 189

Query: 160 --------------------NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
                               N+++R  C  GL +        ++  G+ P        V 
Sbjct: 190 PEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQ 249

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQ 258
             +RA K D A+ +  +     ++M  F       AL K     EA+ +  KE F     
Sbjct: 250 VFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDF----V 305

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+T  +N +I GL      ++A +F   M S  C P++ TY  L+ G     ++ R   +
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +  +  + P    + S++  YCK      A  +  +M  C  KP  V +N+LI    
Sbjct: 366 LSMMIAEGCY-PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424

Query: 379 KVGNMVS------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
             G +        AE     MLS G + + V   S     C  G+  +  K+  EM G  
Sbjct: 425 SGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG 484

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             P+  T++ +I  LC  +R+ +A    K++K   +VP  + Y  +ID F KAG + +A+
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             + EM    C+P  VT+T LI  +    ++  A  +F  M+  GC P+ IT  +LI   
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 553 LKGGMPNEAFRIMQRASEDQNL 574
            K G   +A +I  R   D ++
Sbjct: 605 CKSGNIEKACQIYARMRGDADI 626



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 193/412 (46%), Gaps = 30/412 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G  +    ++  MR D  +P+  M  F + + +               
Sbjct: 596 TYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY-FKIKNNVAE------------- 641

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +P  VT     Y +L++ L K +   +A  + +  F    +P+T  ++ LI G  +  ++
Sbjct: 642 KPNVVT-----YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F+ M   G +P++ TY++LI  L +   +    ++L ++  ++  +P++V YT 
Sbjct: 697 DEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTE 755

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K+ K D+A  +   M   G KP+ VT+  +IDGFGK G +     +   M S G
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VT++ LI+  C  G L++   L +EMK      +V ++  +I    +E  L+   
Sbjct: 816 CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLG- 874

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-----NVIVAEMEEKRCKPDKVTFTI 512
             L++++ N   P   +Y  +ID F KAG ++ A      VI A M        K  +T 
Sbjct: 875 -LLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMS---MTAKKNLYTS 930

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           LI       ++  A  +F  M+R G  PD  T   L+  L++     EA ++
Sbjct: 931 LIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 5/313 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++   C+    D  Q VF  M   G+ PN       +    +  + D    +LS+ 
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +Y  +++ L K    DEA  +         +P+  T+  +I G  + G+V
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            K  E F +MGS GC+P+ VTY  LI+  C    +   + LL+E+K ++ +   V +Y  
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK-QTYWPKHVSSYCK 860

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS-- 395
           VI GY +  +   + G+  E+   G  P+ + + VLID F K G +  A  + + ++S  
Sbjct: 861 VIEGYKR--EFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISAS 918

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                    ++SLI  +    +++   +L  +M    + P++ TF  L+  L +  R  +
Sbjct: 919 MSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEE 978

Query: 456 ARRFLKQLKWNDL 468
           A +    L   D+
Sbjct: 979 ALQLSDSLCQMDI 991



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 162/381 (42%), Gaps = 40/381 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+       + + + M  DG  PN+ + +  +    +A K D A+ +  + 
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + + Y+SL++ L K    D  + +  +       P+   +  +I GLS++ + 
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++    M   GC P++VTY  +I G  +  +V +  EL +E+  K   +P+ VTYT 
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG-CAPNFVTYTV 825

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C  G +D+A  +  EM          ++  +I+G           Y RE +LS G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEG-----------YKREFILSLG 874

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            L +V           +NG                 +P +  + +LI+   K  RL  A 
Sbjct: 875 LLEEVE----------KNGS----------------APTILLYKVLIDNFVKAGRLEVAL 908

Query: 458 RFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
              K++      +  K  +Y  +I  F  A  +D A  +  +M      PD  TF  L++
Sbjct: 909 ELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLM 968

Query: 516 GHCMKGRMVEAISIFNKMLRI 536
           G     R  EA+ + + + ++
Sbjct: 969 GLIRVRRWEEALQLSDSLCQM 989



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 120/283 (42%), Gaps = 5/283 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V    N +  TY+ ++  L +    D V  V   M  +   PN  +    +    +  K 
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  L+          +   Y ++++   K    D+ + +F+E       P+  T+ +L
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I      G + +A+    +M        + +Y  +I G  R   ++ G  LL+EV+ K+ 
Sbjct: 827 INHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLG--LLEEVE-KNG 883

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT--FNVLIDGFGKVGNMVS 385
            +P ++ Y  +I  + K G+++ A  ++ E+ S  +  +A    +  LI  F     +  
Sbjct: 884 SAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDH 943

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           A  +   M+  G +PD+ TF  L+ G  R  +  + L+L D +
Sbjct: 944 AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 216/398 (54%), Gaps = 7/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS-DGHLPNSPMIEF--FVSSCIRAGKCDAAKGLL 214
           TYN ++  +C+ G      +  D +R  D     + +  +   + S  R G  DAA  L 
Sbjct: 172 TYNSIVNGICKSG---DTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  S   YNSL+  L K    ++ V + K+       P+  TFN+LI    + 
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++++A E + +M + G SP+ +TYN+L+ G C  N ++  + +L ++  ++  SPD+VT
Sbjct: 289 GKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML-DLMVRNNCSPDIVT 347

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +TS+I GYCK+ ++D+   ++ +++  G+  + VT+++L+ GF + G +  AE + + M+
Sbjct: 348 FTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G LPDV+T+  L+DG C NG+L + L++ ++++   ++ ++  +TI+I  +CK  ++ 
Sbjct: 408 SLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVE 467

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA      L    + P    Y  +I G CK G++ EAN+++ +MEE   +P+  T+  LI
Sbjct: 468 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLI 527

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             H   G +  +  +  +M   G + D  ++  +I  L
Sbjct: 528 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 218/422 (51%), Gaps = 1/422 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           + H+  T N+++   C          V   +   G+ P++      ++      K   A 
Sbjct: 96  IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAV 155

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L+++        +   YNS++N + K  +   A+ + ++      + D +T++ +I  L
Sbjct: 156 VLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSL 215

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            R G +  A   F +M + G    +VTYN+L+ GLC+  +   G +LLK++  + +  P+
Sbjct: 216 CRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR-KIIPN 274

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V+T+  +I  + K GK+ +A  +Y EM + GI P+ +T+N L+DG+     +  A  M +
Sbjct: 275 VITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLD 334

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+     PD+VTF+SLI GYC+  ++++G+KL  ++  + L  N  T++IL+   C+  
Sbjct: 335 LMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSG 394

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +L  A    +++    ++P    Y  ++DG C  G +++A  I  ++++ +   D V +T
Sbjct: 395 KLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYT 454

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           I+I G C  G++ +A ++F  +   G  P+ +T   +IS L K G  +EA  ++++  ED
Sbjct: 455 IIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 514

Query: 572 QN 573
            N
Sbjct: 515 GN 516



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 202/409 (49%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC         V+   M  +G  PN       V+   ++G    A  LL + 
Sbjct: 137 TFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM 196

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F Y++++++L +    D A+ +FKE      +    T+N L+ GL + G+ 
Sbjct: 197 DERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKW 256

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               +   DM S    P+++T+N LI    +  ++   +EL KE+  K   SP+ +TY S
Sbjct: 257 NDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG-ISPNTITYNS 315

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC   ++ +A  + + M      P  VTF  LI G+ KV  +     +  ++   G
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG 375

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + VT+S L+ G+C++G+L    +L  EM    + P+V T+ IL++ LC   +L  A 
Sbjct: 376 LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKAL 435

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + L+ + +     MY  +I+G CK G V++A  +   +  K  KP+ +T+T++I G 
Sbjct: 436 EIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 495

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C KG + EA  +  KM   G  P+D T N+LI   L+ G    + ++++
Sbjct: 496 CKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIE 544



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 174/342 (50%), Gaps = 1/342 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y   L + +     D+A+ +F+E  R    P    F+    G++   +     +F   M 
Sbjct: 33  YGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKME 92

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G + +I T N +I+  CR  +    + +L +V  K  + PD  T+ ++I+G C   K+
Sbjct: 93  LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV-MKLGYEPDTTTFNTLINGLCLESKV 151

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  +   M   G +P+ VT+N +++G  K G+   A  +  +M       DV T+S++
Sbjct: 152 SEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTI 211

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID  CR+G ++  + L  EM+ K +  ++ T+  L+  LCK  + ND  + LK +    +
Sbjct: 212 IDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKI 271

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P    +N +ID F K G + EAN +  EM  K   P+ +T+  L+ G+CM+ R+ EA +
Sbjct: 272 IPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANN 331

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + + M+R  C+PD +T  SLI    K    +E  ++ ++ S+
Sbjct: 332 MLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISK 373



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 2/160 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           V+L +     TY +++  LC+ G L  ++++  D  +S  +L +  M    +    + GK
Sbjct: 407 VSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL-DIVMYTIIIEGMCKGGK 465

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            + A  L        V  +   Y  +++ L K+ +  EA  + ++     ++P+  T+N 
Sbjct: 466 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNT 525

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           LI+   R G++  + +   +M S G S D  +   +I  L
Sbjct: 526 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 231/483 (47%), Gaps = 82/483 (16%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFV---------SSCIR---- 203
           TYN+++R  C+ G +H +V  VF  M+S G LPN+  +   +         SS ++    
Sbjct: 34  TYNVLIRGFCKGGQMHQAVS-VFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFRE 92

Query: 204 ----------------------AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
                                 AG+   A   L   R    +++T  YN +L  L  +N 
Sbjct: 93  MQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENK 152

Query: 242 A----DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           +    ++A+  FKE      +PD  +++IL+  LS  G + +A   F  M    CSPDI+
Sbjct: 153 SANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIM 209

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYN L+ G C++ +      L+KE+  K+ + P+V TY+ +I+ YCKL K+++A  ++ +
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLMKEI-LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMK 268

Query: 358 MNSCGIKPSAVTFNVLIDGFGKV------------------------------------G 381
           M      P+AVTFN LI GF K                                     G
Sbjct: 269 MIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRG 328

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            + +A  +  ++   G  P +VT++SLI G+C   +L++ ++  DEM+GK  +PNV T++
Sbjct: 329 GVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYS 387

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           ILI+ LCK  R+ +A + L+ +K +   P    Y  +I+GFCK G +  A +   +M+  
Sbjct: 388 ILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLA 447

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C P+ V F  LI G C   R  + + +   M   GC PD IT N LIS L       +A
Sbjct: 448 GCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA 507

Query: 562 FRI 564
            R+
Sbjct: 508 QRL 510



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 224/483 (46%), Gaps = 83/483 (17%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N ++  LCE+G   S   +F  M++   LP S      +     AG+   A   L   
Sbjct: 69  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDM 128

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNA----DEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           R    +++T  YN +L  L  +N +    ++A+  FKE      +PD  +++IL+  LS 
Sbjct: 129 RKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSD 188

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G + +A   F  M    CSPDI+TYN L+ G C++ +      L+KE+  K+ + P+V 
Sbjct: 189 SGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI-LKAGYEPNVF 244

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG------------ 381
           TY+ +I+ YCKL K+++A  ++ +M      P+AVTFN LI GF K G            
Sbjct: 245 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 304

Query: 382 ------------------------NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
                                    + +A  +  ++   G  P +VT++SLI G+C   +
Sbjct: 305 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR------------------- 458
           L++ ++  DEM+GK  +PNV T++ILI+ LCK  R+ +A +                   
Sbjct: 365 LSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGG 423

Query: 459 ----------------FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
                           F +++K     P   ++N +IDG CKA   ++   ++  M  + 
Sbjct: 424 LINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG 483

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           CKPD +T+  LI G C   R+ +A  +F+ M    CAP+  T N LI  L       EA 
Sbjct: 484 CKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEAR 540

Query: 563 RIM 565
            I+
Sbjct: 541 NIL 543



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 184/377 (48%), Gaps = 9/377 (2%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            ++Y++++ +L + G       +F  M      P+       +    + G+   A+ L+ 
Sbjct: 176 LESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMK 232

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +        + F Y+ ++N   K +  +EA  +F +       P+  TFN LI G  + G
Sbjct: 233 EILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAG 292

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV-NEVARGHELLKEVKFKSEFSPDVVT 334
            ++ A + F +M   GC   IVTYNTLI  LC+    V    +L  +++  +  +P +VT
Sbjct: 293 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE-GAGLTPTIVT 351

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y S+I G+C   ++ +A   ++EM      P+ +T+++LIDG  KV  M  A    E M 
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMK 410

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           + GY P VVT+  LI+G+C+ G+L   L   ++MK    +PN   F  LI+ LCK  R N
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           D  R L  +      P    YN +I G C A  V++A  +   M    C P+  TF  LI
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLI 527

Query: 515 IGHCMKGRMVEAISIFN 531
            G C + ++ EA +I +
Sbjct: 528 RGLCAQKKVEEARNILD 544



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 179/359 (49%), Gaps = 42/359 (11%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+LL+ LV     D+A+ +FKE       P+  T+N+LI+G  + G++ +A   F DM S
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF------------------------- 324
            G  P+  T NTL+ GLC + +++   +L +E++                          
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 325 ---------KSEFSPDVVTYTSVISGYC----KLGKMDKATGIYNEMNSCGIKPSAVTFN 371
                    KS  S    TY  V+ G C       ++++A   + EM + G++P   +++
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           +L+      G M  A  +   M      PD++T++ L+DGYC+ GQ  +   L  E+   
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              PNV+T++I+IN  CK +++ +A     ++  ++ VP    +N +I GFCKAG +++A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMK-GRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             + AEME+  CK   VT+  LI   C K G +  A+ +FNK+   G  P  +T NSLI
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 146/301 (48%), Gaps = 37/301 (12%)

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N L+SGL    +  +   L KEV     F+P+  TY  +I G+CK G+M +A  ++++M 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEV-LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           S G+ P+A T N L+ G  ++G M SA  +   M +  +LP   + + L+ G+   G++ 
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKE----NRLNDARRFLKQLKWNDL------- 468
             L    +M+  + S    T+ +++  LC E    NRL  A  F K++K + +       
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 469 -------------------------VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
                                     P    YN ++DG+CK G   EA  ++ E+ +   
Sbjct: 180 HILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 239

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           +P+  T++I+I  +C   ++ EA  +F KM+   C P+ +T N+LI+   K GM  +A +
Sbjct: 240 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 299

Query: 564 I 564
           +
Sbjct: 300 L 300


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 211/411 (51%), Gaps = 7/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  V+R LC  G       V D M   G  P  PM    + +  R+G    +  +L   
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRI 274
                T+ T   N +LNA+ +Q   DEAV + ++      + D  ++N +++GL    R 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+V+   E   +M    C+P+IVT+NTLI  LCR     R HE+L ++  +   +PD+  
Sbjct: 233 GDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS-EHGCTPDIRM 288

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G CK G ++ A  I N M S G+KP+ V +N ++ G         AE +   M 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 D VTF+ L+D +C+NG +++ ++L ++M      P+V T+T +IN  CKE  ++
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A   LK +      P    Y  V+ G C AG   +A  ++++M ++ C P+ VTF  LI
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              C KG + +AI +  +ML  GC+PD I+ +++I  L K G   EA  ++
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 188/394 (47%), Gaps = 3/394 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV+ + N    T+N ++  LC  GL + V  V   M   G  P+  M    +    +
Sbjct: 241 EMVRVDCAPN--IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICK 298

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G  + A  +L++     +  +   YN++L  L       EA  +  E F+     D  T
Sbjct: 299 EGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G V +  E    M S GC PD++TY T+I+G C+   +     LLK + 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P+ V+YT V+ G C  G+   A  + ++M   G  P+ VTFN LI+   K G +
Sbjct: 419 -SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++ML  G  PD++++S++IDG  + G+  + L+L + M  K +SPN   ++ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
             AL +E R+N   +    +K   +     +YN VI   CK    D A    A M    C
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            P++ T+T+LI G   +G   EA  + +++   G
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 196/410 (47%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V++ LC       V+ + D M      PN       +    R G  +    +L+Q 
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T    MY ++++ + K+ + + A  +         +P+   +N +++GL      
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E   +M    C  D VT+N L+   C+   V R  ELL+++       PDV+TYT+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LSHGCMPDVITYTT 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M+SCG KP+ V++ +++ G    G  V AE +  +M+  G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VTF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K  +  +A 
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +     + G V++   +   +++   + D V +  +I   
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +     AI  F  M+  GC P++ T   LI  L   G+  EA  ++  
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 1/311 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+ +TF  +++GL   G +  A E   +M   GC+P    Y+ ++   CR         +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+ +  K   + D      V++  C+ G +D+A G+  ++   G +   V++N ++ G  
Sbjct: 169 LEAMHAKG-CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
                   E + + M+     P++VTF++LI   CRNG   +  ++  +M     +P++ 
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +I+ +CKE  L  A   L ++    L P    YN V+ G C A    EA  +++EM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +K C  D VTF IL+   C  G +   I +  +ML  GC PD IT  ++I+   K G+ 
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 559 NEAFRIMQRAS 569
           +EA  +++  S
Sbjct: 408 DEAVMLLKSMS 418



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ GL D   ++   M S G  PN+      +     AG+   A+ L+SQ 
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   +N+L+N L K+   ++A+ + K+       PD  +++ +I GL + G+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
           ++A E    M + G SP+ + Y+++   L R   VN+V +  + +K+   +S    D V 
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS----DAVL 568

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +VIS  CK  + D+A   +  M S G  P+  T+ +LI G    G    A+ +   + 
Sbjct: 569 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628

Query: 395 SFGYL 399
           S G L
Sbjct: 629 SRGAL 633



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 128/290 (44%), Gaps = 14/290 (4%)

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +V YN +++G CR  ++A    L   V       P+  T+  V+ G C  G++  A  + 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +EM+  G  P    ++V+++   + G   ++  + E M + G   D    + +++  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G +++ + L  ++       ++ ++  ++  LC   R  D    + ++   D  P    +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I   C+ G  +  + ++A+M E  C PD   +  +I G C +G +  A  I N+M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
            G  P+ +  N+++  L             +R  E + L    ++K  PL
Sbjct: 315 YGLKPNVVCYNTVLKGLCSA----------ERWKEAEELLSEMFQKDCPL 354


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 201/410 (49%), Gaps = 5/410 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++R+LC  G       VFD M   G  P+       + +  +A     A  LL + 
Sbjct: 164 TFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEM 223

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN L+NA+  + + DEA+ +  +      +PD  T+  +++ L      
Sbjct: 224 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERW 283

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTY 335
           K+  E F +M S  C+PD VT+NT+++ LC+   V R    +K V   SE    PD+VTY
Sbjct: 284 KEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA---IKVVDHMSEHGCIPDIVTY 340

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +S++ G C +G++D A  + + + S G KP  + +  ++ G   +     AE +   M+ 
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               PD VTF+++I   C+ G +++ +K+ ++M     +P++ T+  +I+ LC E  ++D
Sbjct: 401 SDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD 460

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L  L+     P    +N ++ G C     ++A  ++  M    C PD  TF  +I 
Sbjct: 461 AMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVIT 520

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             C KG +++AI     M   GC P+  T N ++  LLK G   EA +++
Sbjct: 521 SLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 219/446 (49%), Gaps = 11/446 (2%)

Query: 129 VIKRLDNPKLGLKFLEFSRV--NLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSD 185
           +IKRL +   G +  +  RV   L  + +  TYN ++   C  G + D+ +++       
Sbjct: 104 LIKRLCS---GGRVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPP 160

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
                +P+I      C+R G+   A  +         + S   Y+ LL+A  K +   +A
Sbjct: 161 DTFTFNPLIRAL---CVR-GRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQA 216

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           + +  E      +PD  T+N+LI  +   G+V +A     D+ S GC PD VTY  ++  
Sbjct: 217 MVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKS 276

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           LC         EL  E+   ++ +PD VT+ ++++  C+ G +D+A  + + M+  G  P
Sbjct: 277 LCGSERWKEVEELFAEMA-SNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             VT++ ++DG   VG +  A  +  R+ S+G  PD + +++++ G C   Q     +L 
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            EM   +  P+  TF  +I +LC++  ++ A + ++Q+  N   P    YN +IDG C  
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE 455

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
             +D+A  +++ ++   CKPD VTF  L+ G C   R  +A  +   M+   C PD  T 
Sbjct: 456 RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTF 515

Query: 546 NSLISCLLKGGMPNEAFRIMQRASED 571
           N++I+ L + G+  +A   ++  +E+
Sbjct: 516 NTVITSLCQKGLLLQAIETLKIMAEN 541



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 194/412 (47%), Gaps = 3/412 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY++++ + C+   +    V+ D MR+ G  P+       +++    G  D A  +L
Sbjct: 196 SVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNIL 255

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S             Y  +L +L       E   +F E       PD  TFN ++  L + 
Sbjct: 256 SDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQ 315

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V +A +    M   GC PDIVTY++++ GLC V  V    ELL  +K      PD + 
Sbjct: 316 GLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIA 374

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT+V+ G C + + + A  +  EM      P  VTFN +I    + G +  A  + E+M 
Sbjct: 375 YTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD+VT++S+IDG C    ++  ++L   ++     P++ TF  L+  LC  +R  
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWE 494

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA + +  +  +D  P    +N VI   C+ G + +A   +  M E  C P++ T+ I++
Sbjct: 495 DAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
                 G+  EA+ + + M      PD IT N++IS + K G   EA  +++
Sbjct: 555 DALLKAGKTQEALKLLSGM--TNGTPDLITYNTVISNITKAGKMEEALDLLR 604



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 197/410 (48%), Gaps = 3/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ ++C  G  D    +   + S G  P++      + S   + +    + L ++ 
Sbjct: 234 TYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEM 293

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +       +N+++ +L +Q   D A+ +          PD  T++ ++ GL  +G V
Sbjct: 294 ASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRV 353

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    + S+GC PD + Y T++ GLC + +     EL+ E+   S+  PD VT+ +
Sbjct: 354 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEM-VCSDCPPDEVTFNT 412

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+  C+ G +D+A  +  +M+  G  P  VT+N +IDG      +  A  +   + S+G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VTF++L+ G C   +     +L   M   +  P+  TF  +I +LC++  L  A 
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK +  N  +P    YN V+D   KAG   EA  +++ M      PD +T+  +I   
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNI 590

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              G+M EA+ +   M+  G +PD IT  SL   + +    + A R++ R
Sbjct: 591 TKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCR 640



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 190/408 (46%), Gaps = 3/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++ SLC+ GL D    V D+M   G +P+       +      G+ D A  LLS+ 
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL 363

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +       T  Y ++L  L      + A  +  E       PD  TFN +I  L + G V
Sbjct: 364 KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLV 423

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +    M   GC+PDIVTYN++I GLC    +    ELL  ++      PD+VT+ +
Sbjct: 424 DRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG-CKPDIVTFNT 482

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C + + + A  +   M      P A TFN +I    + G ++ A    + M   G
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+  T++ ++D   + G+  + LKL   M   N +P++ T+  +I+ + K  ++ +A 
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEAL 600

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +  N L P    Y  +  G C+    D A  ++  +++    PD   +  +++G 
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGF 660

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C   R   AI  F  M+  GC PD+ T   L+  L    + +EA +++
Sbjct: 661 CQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 3/306 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N V+ SLC+ GL D    V + M  +G  P+       +         D A  LLS  
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +          +N+LL  L   +  ++A  +          PD  TFN +I  L + G +
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E    M   GC P+  TYN ++  L +     +  E LK +   +  +PD++TY +
Sbjct: 529 LQAIETLKIMAENGCIPNQSTYNIVVDALLKA---GKTQEALKLLSGMTNGTPDLITYNT 585

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VIS   K GKM++A  +   M S G+ P  +T+  L  G  +      A  M  R+   G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD   ++ ++ G+C+N + +  +     M      P+  T+ IL+ AL  E  L++A+
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAK 705

Query: 458 RFLKQL 463
           + L  L
Sbjct: 706 QLLVNL 711



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 5/243 (2%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N +++ LC +    D+ Q++ + M SD   P++      ++S  + G    A   L  
Sbjct: 479 TFNTLLKGLCSVDRWEDAEQLMVNMMHSDCP-PDATTFNTVITSLCQKGLLLQAIETLKI 537

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   YN +++AL+K     EA+ +          PD  T+N +I  +++ G+
Sbjct: 538 MAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN--GTPDLITYNTVISNITKAGK 595

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A +    M S G SPD +TY +L  G+CR +   R   +L  ++     SPD   Y 
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG-LSPDATFYN 654

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++ G+C+  + D A   +  M S G  P   T+ +L++       +  A+ +   + S 
Sbjct: 655 DILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSL 714

Query: 397 GYL 399
           G L
Sbjct: 715 GVL 717



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 417 QLNQGLKLCDEM-----KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           +++  L L D +      GK L   V    ILI  LC   R+ DA R    L  +  V  
Sbjct: 73  EIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASATV-- 130

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +++G+C+AG +++A  +++ M      PD  TF  LI   C++GR+ +A+++F+
Sbjct: 131 -VTYNTMVNGYCRAGRIEDARRLISGMPF---PPDTFTFNPLIRALCVRGRVPDALAVFD 186

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ML  GC+P  +T + L+    K     +A  ++  
Sbjct: 187 DMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDE 222


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 211/411 (51%), Gaps = 7/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  V+R LC  G       V D M   G  P  PM    + +  R+G    +  +L   
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRI 274
                T+ T   N +LNA+ +Q   DEAV + ++      + D  ++N +++GL    R 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+V+   E   +M    C+P+IVT+NTLI  LCR     R HE+L ++  +   +PD+  
Sbjct: 233 GDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS-EHGCTPDIRM 288

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G CK G ++ A  I N M S G+KP+ V +N ++ G         AE +   M 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 D VTF+ L+D +C+NG +++ ++L ++M      P+V T+T +IN  CKE  ++
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A   LK +      P    Y  V+ G C AG   +A  ++++M ++ C P+ VTF  LI
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              C KG + +AI +  +ML  GC+PD I+ +++I  L K G   EA  ++
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 188/394 (47%), Gaps = 3/394 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV+ + N    T+N ++  LC  GL + V  V   M   G  P+  M    +    +
Sbjct: 241 EMVRVDCAPN--IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICK 298

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G  + A  +L++     +  +   YN++L  L       EA  +  E F+     D  T
Sbjct: 299 EGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G V +  E    M S GC PD++TY T+I+G C+   +     LLK + 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P+ V+YT V+ G C  G+   A  + ++M   G  P+ VTFN LI+   K G +
Sbjct: 419 -SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++ML  G  PD++++S++IDG  + G+  + L+L + M  K +SPN   ++ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
             AL +E R+N   +    +K   +     +YN VI   CK    D A    A M    C
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            P++ T+T+LI G   +G   EA  + +++   G
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 196/410 (47%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V++ LC       V+ + D M      PN       +    R G  +    +L+Q 
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T    MY ++++ + K+ + + A  +         +P+   +N +++GL      
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E   +M    C  D VT+N L+   C+   V R  ELL+++       PDV+TYT+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LSHGCMPDVITYTT 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M+SCG KP+ V++ +++ G    G  V AE +  +M+  G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VTF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K  +  +A 
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +     + G V++   +   +++   + D V +  +I   
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +     AI  F  M+  GC P++ T   LI  L   G+  EA  ++  
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 1/311 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+ +TF  +++GL   G +  A E   +M   GC+P    Y+ ++   CR         +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+ +  K   + D      V++  C+ G +D+A G+  ++   G +   V++N ++ G  
Sbjct: 169 LEAMHAKG-CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
                   E + + M+     P++VTF++LI   CRNG   +  ++  +M     +P++ 
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +I+ +CKE  L  A   L ++    L P    YN V+ G C A    EA  +++EM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +K C  D VTF IL+   C  G +   I +  +ML  GC PD IT  ++I+   K G+ 
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 559 NEAFRIMQRAS 569
           +EA  +++  S
Sbjct: 408 DEAVMLLKSMS 418



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ GL D   ++   M S G  PN+      +     AG+   A+ L+SQ 
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   +N+L+N L K+   ++A+ + K+       PD  +++ +I GL + G+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
           ++A E    M + G SP+ + Y+++   L R   VN+V +  + +K+   +S    D V 
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS----DAVL 568

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +VIS  CK  + D+A   +  M S G  P+  T+ +LI G    G    A+ +   + 
Sbjct: 569 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628

Query: 395 SFGYL 399
           S G L
Sbjct: 629 SRGAL 633



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 128/290 (44%), Gaps = 14/290 (4%)

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +V YN +++G CR  ++A    L   V       P+  T+  V+ G C  G++  A  + 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +EM+  G  P    ++V+++   + G   ++  + E M + G   D    + +++  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G +++ + L  ++       ++ ++  ++  LC   R  D    + ++   D  P    +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I   C+ G  +  + ++A+M E  C PD   +  +I G C +G +  A  I N+M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
            G  P+ +  N+++  L             +R  E + L    ++K  PL
Sbjct: 315 YGLKPNVVCYNTVLKGLCSA----------ERWKEAEELLSEMFQKDCPL 354


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 213/401 (53%), Gaps = 7/401 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS-DGHLPNSPMIEF--FVSSCIRAGKCDAAKGLL 214
           TYN ++  +C  G      + FD +R  +     + +  +   + S  R G  DAA  L 
Sbjct: 195 TYNSIVNGICRSG---DTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  S   YNSL+  L K    ++   + K+       P+  TFN+L+    + 
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++++A E + +M + G SP+I+TYNTL+ G C  N ++  + +L ++  +++ SPD+VT
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVT 370

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +TS+I GYC + ++D    ++  ++  G+  +AVT+++L+ GF + G +  AE + + M+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G LPDV+T+  L+DG C NG+L + L++ ++++   +   +  +T +I  +CK  ++ 
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA      L    + P    Y  +I G CK G++ EAN+++ +MEE    P+  T+  LI
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             H   G +  +  +  +M   G + D  ++  +I  LL G
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 196/394 (49%), Gaps = 1/394 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D    +F  M     LP       F S+  R  + +       Q     +  + +  N +
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           +N   +      A  +  +  +L  +PDT TFN LI GL   G+V KA      M   GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PD+VTYN++++G+CR  + +   ++L++++ +     DV TY+++I   C+ G +D A 
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ EM + GIK S VT+N L+ G  K G       + + M+S   +P+V+TF+ L+D +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            + G+L +  +L  EM  + +SPN+ T+  L++  C +NRL++A   L  +  N   P  
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             +  +I G+C    VD+   +   + ++    + VT++IL+ G C  G++  A  +F +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           M+  G  PD +T   L+  L   G   +A  I +
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 218/444 (49%), Gaps = 2/444 (0%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           I R     L L F +   +N  + H+  T N+++   C          V   +   G+ P
Sbjct: 98  IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++      ++     GK   A  L+ +            YNS++N + +  +   A  M 
Sbjct: 157 DTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDML 216

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           ++      + D +T++ +I  L R G +  A   F +M + G    +VTYN+L+ GLC+ 
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            +   G  LLK++    E  P+V+T+  ++  + K GK+ +A  +Y EM + GI P+ +T
Sbjct: 277 GKWNDGALLLKDM-VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N L+DG+     +  A  M + M+     PD+VTF+SLI GYC   +++ G+K+   + 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            + L  N  T++IL+   C+  ++  A    +++  + ++P    Y  ++DG C  G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  I  ++++ +     V +T +I G C  G++ +A ++F  +   G  P+ +T   +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 550 SCLLKGGMPNEAFRIMQRASEDQN 573
           S L K G  +EA  ++++  ED N
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGN 539



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 199/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC  G      V+ D M  +G  P+       V+   R+G    A  +L + 
Sbjct: 160 TFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM 219

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F Y++++++L +    D A+ +FKE      +    T+N L++GL + G+ 
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                   DM S    P+++T+N L+    +  ++   +EL KE+  +   SP+++TY +
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNT 338

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC   ++ +A  + + M      P  VTF  LI G+  V  +     +   +   G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + VT+S L+ G+C++G++    +L  EM    + P+V T+ IL++ LC   +L  A 
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + L+ + +     MY  +I+G CK G V++A  +   +  K  KP+ +T+T++I G 
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C KG + EA  +  KM   G AP+D T N+LI   L+ G
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 11/181 (6%)

Query: 405 FSSLIDG-YCRNGQLNQGL---------KLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           FSS+ +G  C   +L  G+          L  EM      P +  F+   +A+ +  + N
Sbjct: 46  FSSITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFN 105

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
               F KQL+ N +    +  N +I+ FC+      A  ++ ++ +   +PD  TF  LI
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G C++G++ +A+ + ++M+  GC PD +T NS+++ + + G  + AF  M R  E++N+
Sbjct: 166 NGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD-MLRKMEERNV 224

Query: 575 Q 575
           +
Sbjct: 225 K 225


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 219/434 (50%), Gaps = 11/434 (2%)

Query: 140 LKFLEFSRVNLS---LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           LK +E +   +S   +     T+N+++++LC         ++ + M S G +P+      
Sbjct: 170 LKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +   I  G  D A  +  Q      + S    N +++   K+   ++A+   +E   + 
Sbjct: 230 IMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE---MS 286

Query: 257 SQ----PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
           +Q    PD +TFN L+ GL + G VK A E    M   G  PD+ TYN++ISGLC++ EV
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               E L ++    + SP+ VTY ++IS  CK  ++++AT +   + S GI P   TFN 
Sbjct: 347 KEAVEFLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LI G     N   A  + E M S G  PD  T++ LID  C  G+L++ L +  +M+   
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
            + +V T+  LI+  CK N++ +A     +++ + +      YN +IDG CK+  V++A+
Sbjct: 466 CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAS 525

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++ +M  +  KPDK T+  L+   C  G + +A  I   M   GC PD +T  +LIS L
Sbjct: 526 QLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585

Query: 553 LKGGMPNEAFRIMQ 566
            K G    A ++++
Sbjct: 586 CKAGRVEVASKLLR 599



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 210/427 (49%), Gaps = 13/427 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           KT+  +M+   E G  D    + + M   G   ++  +   V    + G+ + A   + +
Sbjct: 225 KTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284

Query: 217 ------FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
                 F P + T     +N+L+N L K  +   A+ +     +    PD +T+N +I G
Sbjct: 285 MSNQDGFFPDQYT-----FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L ++GEVK+A EF   M +  CSP+ VTYNTLIS LC+ N+V    EL + +  K    P
Sbjct: 340 LCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG-ILP 398

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DV T+ S+I G C       A  ++ EM S G +P   T+N+LID     G +  A  M 
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           ++M   G    V+T+++LIDG+C+  ++ +  ++ DEM+   +S N  T+  LI+ LCK 
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R+ DA + + Q+      P  F YN ++  FC+ G++ +A  IV  M    C+PD VT+
Sbjct: 519 RRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             LI G C  GR+  A  +   +   G A      N +I  L +     EA  + +   E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 571 DQNLQLP 577
            QN   P
Sbjct: 639 -QNEAAP 644



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 205/409 (50%), Gaps = 2/409 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  L +      V++    M   G  P+       + +  RA +   A  +L    
Sbjct: 157 YNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +      + +++   +++ + D A+ + ++           + N+++ G  + G V+
Sbjct: 217 SYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276

Query: 279 KAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            A  F  +M +  G  PD  T+NTL++GLC+   V    E++ +V  +  + PDV TY S
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM-DVMLQEGYDPDVYTYNS 335

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VISG CKLG++ +A    ++M +    P+ VT+N LI    K   +  A  +   + S G
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV TF+SLI G C        ++L +EM+ K   P+ +T+ +LI++LC + +L++A 
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LKQ++ +        YN +IDGFCKA  + EA  I  EME      + VT+  LI G 
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C   R+ +A  + ++M+  G  PD  T NSL++   +GG   +A  I+Q
Sbjct: 516 CKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQ 564



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 212/452 (46%), Gaps = 50/452 (11%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDG-HLPNSP---MIEFFVSSCIRAGKCDAAKGLL 214
           Y  ++  L   G  D ++ + + M++ G  +  SP   +IE +    ++         ++
Sbjct: 86  YEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMI 145

Query: 215 SQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
             F  +P      T  YN +LN LV  NN         +      +PD  TFN+LI+ L 
Sbjct: 146 DDFGLKP-----DTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPD 331
           R  +++ A     DM S+G  PD  T+ T++ G     ++     + ++ V+F   +S  
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSN- 259

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            V+   ++ G+CK G+++ A     EM N  G  P   TFN L++G  K G++  A  + 
Sbjct: 260 -VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + ML  GY PDV T++S+I G C+ G++ + ++  D+M  ++ SPN  T+  LI+ LCKE
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKE 378

Query: 451 NRLNDARRFLKQLK----------WNDLV-------------------------PKPFMY 475
           N++ +A    + L           +N L+                         P  F Y
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +ID  C  G +DEA  ++ +ME   C    +T+  LI G C   ++ EA  IF++M  
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            G + + +T N+LI  L K     +A ++M +
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQ 530



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 103/245 (42%), Gaps = 34/245 (13%)

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K  FSP+   Y  ++    + G  D    I  +M + G +     F +LI+ + +     
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQF---- 131

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
               +++ +L       VV +  +ID +        GLK           P+ + +  ++
Sbjct: 132 ---ELQDEILG------VVHW--MIDDF--------GLK-----------PDTHFYNRML 161

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           N L   N L        ++    + P    +N +I   C+A  +  A +++ +M      
Sbjct: 162 NLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLV 221

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD+ TFT ++ G+  +G +  A+ I  +M+  GC+  +++VN ++    K G   +A   
Sbjct: 222 PDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281

Query: 565 MQRAS 569
           +Q  S
Sbjct: 282 IQEMS 286



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 7/177 (3%)

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P+   +  ++    R+G  +   K+ ++MK          F ILI +   +  L D  
Sbjct: 79  FSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYA-QFELQD-- 135

Query: 458 RFLKQLKW--ND--LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             L  + W  +D  L P    YN +++      N+    +  A+M     KPD  TF +L
Sbjct: 136 EILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVL 195

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           I   C   ++  AI +   M   G  PD+ T  +++   ++ G  + A RI ++  E
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVE 252


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 205/408 (50%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+R+LC  G       V D M   G  P  PM    + +  R G   +A  +L   
Sbjct: 161 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 220

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +     N +LNA+  Q + DEA+++ ++      +PD  ++N +++GL      
Sbjct: 221 HARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW 280

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               E   +M    C P+IVT+NTLIS LCR     R HE+L ++  +   +PD+  Y +
Sbjct: 281 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM-VEHGCTPDIRMYAT 339

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G ++ A  I N M S G+KP+ V +N L+ G          E +   M    
Sbjct: 340 IIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 399

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D VTF+ L+D +C+NG +++ ++L ++M      P+V T+T +IN  CKE  +++A 
Sbjct: 400 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 459

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK +      P    Y  V+ G C A    +A  ++++M ++ C  + +TF  LI   
Sbjct: 460 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 519

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C KG + +AI +  +ML  GC+PD I+ +++I  L K G  +EA  ++
Sbjct: 520 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 567



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 186/390 (47%), Gaps = 1/390 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V ++   +  T+N ++  LC  GL + V  V   M   G  P+  M    +    + G  
Sbjct: 291 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHL 350

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  +L++     +  +   YN+LL  L      +E   +  E F      D  TFNIL
Sbjct: 351 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 410

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +    + G V +  E    M   GC PD++TY T+I+G C+   +     LLK +     
Sbjct: 411 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT-ACG 469

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ ++YT V+ G C   +   A  + ++M   G   + +TFN LI+   K G +  A 
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + ++ML  G  PD++++S++IDG  + G+ ++ L+L + M  K +SPN   ++ + +AL
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            +E R+N   +    ++   +     +YN VI   CK G  + A   +A M    C P++
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            T+TILI G   +G + EA  +  ++   G
Sbjct: 650 STYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 196/406 (48%), Gaps = 39/406 (9%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            V+   RAG+ ++A+ L +      V  + + Y  ++ AL  +    +A+ +  E  R  
Sbjct: 133 MVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 189

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS----------------------- 293
             P    ++++++   R G  + A     D+ + GC+                       
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249

Query: 294 ------------PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                       PD+V+YN ++ GLC         EL++E+  +    P++VT+ ++IS 
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISY 308

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C+ G  ++   +  +M   G  P    +  +IDG  K G++  A  +  RM S+G  P+
Sbjct: 309 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 368

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VV +++L+ G C   +  +  +L  EM  K+   +  TF IL++  C+   ++     L+
Sbjct: 369 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 428

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q+  +  +P    Y  VI+GFCK G +DEA +++  M    CKP+ +++TI++ G C   
Sbjct: 429 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 488

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           R V+A  + ++M++ GC  + IT N+LI+ L K G+  +A  ++++
Sbjct: 489 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 534



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V++ LC       VQ + + M      PN       +S   R G  +    +L+Q 
Sbjct: 266 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T    MY ++++ + K+ + + A  +         +P+   +N L++GL      
Sbjct: 326 VEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 385

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++  E   +M    C  D VT+N L+   C+   V R  ELL+++  +    PDV+TYT+
Sbjct: 386 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LEHGCMPDVITYTT 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M +CG KP+ +++ +++ G       V AE +  +M+  G
Sbjct: 445 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 504

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + +TF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K  + ++A 
Sbjct: 505 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 564

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +     + G +++   +   +++   + D V +  +I   
Sbjct: 565 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 624

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +G    AI     M+  GC P++ T   LI  L   G   EA  ++
Sbjct: 625 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 672



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 14/287 (4%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YN +++G CR  ++     L   V       P+  TY  V+   C  G++  A  + +EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVP----PNAYTYFPVVRALCARGRIADALAVLDEM 185

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G  P    ++V+++   + G   SA  + E + + G   DV   + +++  C  G +
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++ L L  ++      P+V ++  ++  LC   R    +  ++++      P    +N +
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I   C+ G  +  + ++A+M E  C PD   +  +I G C +G +  A  I N+M   G 
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
            P+ +  N+L+  L             +R  E + L    + K  PL
Sbjct: 366 KPNVVCYNTLLKGLCSA----------ERWEETEELLAEMFDKDCPL 402



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 7/245 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ GL D   ++   M + G  PN+      +     A +   A+ L+SQ 
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 500

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++   +N+L+N L K+   ++A+ + K+       PD  +++ +I GL + G+ 
Sbjct: 501 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 560

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
            +A E    M + G SP+ + Y+++ S L R   +N+V +  + +++   +S    D V 
Sbjct: 561 DEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRS----DAVL 616

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +VIS  CK G+ ++A      M S G  P+  T+ +LI G    G +  A+ M   + 
Sbjct: 617 YNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELC 676

Query: 395 SFGYL 399
           S G L
Sbjct: 677 SKGAL 681



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ GL +    +   M  +G  P+       +    +AGK D A  LL+  
Sbjct: 511 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 570

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +T +Y+S+ +AL ++   ++ + MF        + D   +N +I  L + GE 
Sbjct: 571 VNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET 630

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A EF   M S GC P+  TY  LI GL     V    E+L E+  K      ++ +  
Sbjct: 631 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFG 690

Query: 338 VI 339
           ++
Sbjct: 691 IV 692


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 215/417 (51%), Gaps = 10/417 (2%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N V+  LC +  +H+  ++V D M   G  PN       ++   R GK D A+ LL++
Sbjct: 280 TFNDVIYGLCRLNRIHEGAKLV-DRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNK 338

Query: 217 F-RPGEVTMSTFMYNSLLNALVKQNNADEA-VYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              P +V      +  L+N  VK    DEA  +++ +  +   +PD +TFN LI GL + 
Sbjct: 339 VPTPNDVH-----FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKK 393

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +  A +   DM + GC+P+++TY TL+ G C+ N++     +L E+  K  F  +++ 
Sbjct: 394 GLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG-FELNIMG 452

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  ++   CK GK+ KA  +  EM+  G KP   TFN LI G  KV     A  +   ML
Sbjct: 453 YNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDML 512

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G + + VT+++LI  + R G + + LKL ++M  +    +  T+  LI A CK     
Sbjct: 513 LDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATE 572

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A     ++   DLVP     N +I+G C+ G V  A  ++ +M  +   PD VT+  LI
Sbjct: 573 KALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G C  G + EA ++FNK+   G  PD IT N+LI    + GM ++A+ ++ R  E+
Sbjct: 633 NGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVEN 689



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 205/409 (50%), Gaps = 6/409 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +FK+YN+V+  L           VF  M S G +P        + +     + D A  LL
Sbjct: 172 TFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLL 231

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                     ++ +Y +L++AL K++  +EA+ + +E F +   PD  TFN +I GL R+
Sbjct: 232 RDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRL 291

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             + +  +    M   G +P+ +TY  L++GLCRV +V     LL +V      +P+ V 
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP-----TPNDVH 346

Query: 335 YTSVISGYCKLGKMDKATG-IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +T +I+GY K G++D+A   +Y++M   G +P   TFN LI G  K G M SA  M   M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + G  P+++T+++L+DG+C+  QL +   + +EM  K    N+  + +L+ ALCK  ++
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A   L ++      P  F +N +I G CK    ++A  +  +M       + VT+  L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           I      G + EA+ + N ML  GC  D+IT N LI    K G   +A 
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKAL 575



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 185/420 (44%), Gaps = 67/420 (15%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGL 271
           LL Q +   +     ++  ++    + N   +A  M  +   +Y  +P   ++N+++  L
Sbjct: 124 LLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDIL 183

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE---------- 321
                   A   FY+M S G  P + T+  ++  LC VNEV     LL++          
Sbjct: 184 VSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNS 243

Query: 322 -------------------VKFKSEF-----SPDVVTYTSVISGYCKLGKMDKATGIYNE 357
                              +K   E       PDV T+  VI G C+L ++ +   + + 
Sbjct: 244 VVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDR 303

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAE------------------------------ 387
           M   G  P+ +T+ VL++G  +VG +  A+                              
Sbjct: 304 MLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEA 363

Query: 388 --YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
             ++ ++M+  G  PDV TF++LI G C+ G +   + + ++M     +PN+ T+T L++
Sbjct: 364 NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLD 423

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             CK+N+L +A   L ++           YN ++   CK G V +A  ++ EM +K CKP
Sbjct: 424 GFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKP 483

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  TF  LI G C   R  +A++++  ML  G   + +T N+LI   L+GG   EA +++
Sbjct: 484 DIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLV 543



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 145/293 (49%), Gaps = 7/293 (2%)

Query: 279 KAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +A     DM G + C P   +YN ++  L   N  +    +  E+  K    P V T+  
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVI-PTVYTFGV 213

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+   C + ++D A  +  +M   G  P++V +  LI    K   +  A  + E M   G
Sbjct: 214 VMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMG 273

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV TF+ +I G CR  ++++G KL D M  +  +PN  T+ +L+N LC+  ++++A+
Sbjct: 274 CLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQ 333

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE-MEEKRCKPDKVTFTILIIG 516
             L ++      P    +  +I+G+ K+G +DEAN  + + M +  C+PD  TF  LI G
Sbjct: 334 VLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHG 389

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            C KG M  A+ + N M   GC P+ IT  +L+    K     EA  ++   S
Sbjct: 390 LCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMS 442



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 147/310 (47%), Gaps = 5/310 (1%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            +++LI  L    E K   +    +   G +     +  ++    R N   +   +L ++
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           K      P   +Y  V+           A  ++ EM S G+ P+  TF V++     V  
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           + +A  +   M   G +P+ V + +LI    +  ++N+ LKL +EM      P+V TF  
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I  LC+ NR+++  + + ++ +    P    Y  +++G C+ G VDEA V++     K 
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL----NKV 339

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAIS-IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             P+ V FTILI G+   GR+ EA + +++KM++ GC PD  T N+LI  L K G+   A
Sbjct: 340 PTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSA 399

Query: 562 FRIMQRASED 571
             ++   S +
Sbjct: 400 VDMVNDMSAN 409



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 13/202 (6%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA----GKCDAAKG 212
           TYN ++ +    G + +++++V D +         P+ E   +  I+A    G  + A G
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDML-----FRGCPLDEITYNGLIKAFCKLGATEKALG 576

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L  +    ++  S    N L+N L +      A+ + ++       PD  T+N LI GL 
Sbjct: 577 LFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLC 636

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           ++G +++AF  F  + + G  PD +TYNTLI   CR       + LL     ++ F P+ 
Sbjct: 637 KMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLR-GVENAFIPND 695

Query: 333 VTYTSVISGYCKLGKMDKATGI 354
           VT+  ++S + K  ++ K  GI
Sbjct: 696 VTWYILVSNFIK--EIGKENGI 715


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 232/457 (50%), Gaps = 21/457 (4%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM-RSDGHL----- 188
           + +L L+F ++S+    +++  +T   V+  L     +  V+   D + +++ H      
Sbjct: 57  DSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVF 116

Query: 189 -----------PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
                       N+ + +  V + +   +  +A  +  + +     +S    N LL+ALV
Sbjct: 117 HSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALV 176

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K N   E  Y++KE  +   QP+  TFNI I GL + G++ KA +   D+ ++G SP+IV
Sbjct: 177 KGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIV 236

Query: 298 TYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           TYNTLI G C+     ++ R   +LKE+   ++  P+ +T+ ++I G+CK   +  A   
Sbjct: 237 TYNTLIDGHCKKGSAGKMYRADAILKEM-LANKICPNEITFNTLIDGFCKDENVLAAKNA 295

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           + EM   G+KP+ VT+N LI+G    G +  A  + ++M+  G  P++VTF++LI+G+C+
Sbjct: 296 FEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCK 355

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
              + +  KL D++  ++L PN  TF  +I+A CK   + +       +    + P    
Sbjct: 356 KKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVST 415

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +I G C+  NV  A  ++ EME    K D VT+ ILI G C  G   +A  +  +ML
Sbjct: 416 YNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEML 475

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +G  P+ +T N+L+      G    A ++  +  ++
Sbjct: 476 NVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKE 512



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 22/280 (7%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  R  L  N    TYN ++  L   G  D    ++D M   G  PN       ++  
Sbjct: 296 FEEMQRQGLKPN--IVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGF 353

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            +      A+ L       ++  +   +N++++A  K    +E   +          P+ 
Sbjct: 354 CKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNV 413

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+N LI GL R   V+ A +   +M ++    D+VTYN LI G C+  E ++  +LL E
Sbjct: 414 STYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGE 473

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +       P+ VTY +++ GYC  G +  A  +  +M   G + + VT+NVLI GF K G
Sbjct: 474 M-LNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTG 532

Query: 382 -------------------NMVSAEYMRERMLSFGYLPDV 402
                              N  + + +R  ML  G++PD+
Sbjct: 533 KLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDI 572


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 211/411 (51%), Gaps = 7/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  V+R LC  G       V D M   G  P  PM    + +  R+G    +  +L   
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRI 274
                T+ T   N +LNA+ +Q   DEAV + ++      + D  ++N +++GL    R 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+V+   E   +M    C+P+IVT+NTLI  LCR     R HE+L ++  +   +PD+  
Sbjct: 233 GDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS-EHGCTPDIRM 288

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G CK G ++ A  I N M S G+KP+ V +N ++ G         AE +   M 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 D VTF+ L+D +C+NG +++ ++L ++M      P+V T+T +IN  CKE  ++
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A   LK +      P    Y  V+ G C AG   +A  ++++M ++ C P+ VTF  LI
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              C KG + +AI +  +ML  GC+PD I+ +++I  L K G   EA  ++
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 188/394 (47%), Gaps = 3/394 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV+ + N    T+N ++  LC  GL + V  V   M   G  P+  M    +    +
Sbjct: 241 EMVRVDCAPN--IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICK 298

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G  + A  +L++     +  +   YN++L  L       EA  +  E F+     D  T
Sbjct: 299 EGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G V +  E    M S GC PD++TY T+I+G C+   +     LLK + 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P+ V+YT V+ G C  G+   A  + ++M   G  P+ VTFN LI+   K G +
Sbjct: 419 -SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++ML  G  PD++++S++IDG  + G+  + L+L + M  K +SPN   ++ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
             AL +E R+N   +    +K   +     +YN VI   CK    D A    A M    C
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            P++ T+T+LI G   +G   EA  + +++   G
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 196/410 (47%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V++ LC       V+ + D M      PN       +    R G  +    +L+Q 
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T    MY ++++ + K+ + + A  +         +P+   +N +++GL      
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E   +M    C  D VT+N L+   C+   V R  ELL+++       PDV+TYT+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LSHGCMPDVITYTT 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M+SCG KP+ V++ +++ G    G  V AE +  +M+  G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VTF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K  +  +A 
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +     + G V++   +   +++   + D V +  +I   
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +     AI  F  M+  GC P++ T   LI  L   G+  EA  ++  
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 1/311 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+ +TF  +++GL   G +  A E   +M   GC+P    Y+ ++   CR         +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+ +  K   + D      V++  C+ G +D+A G+  ++   G +   V++N ++ G  
Sbjct: 169 LEAMHAKG-CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
                   E + + M+     P++VTF++LI   CRNG   +  ++  +M     +P++ 
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +I+ +CKE  L  A   L ++    L P    YN V+ G C A    EA  +++EM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +K C  D VTF IL+   C  G +   I +  +ML  GC PD IT  ++I+   K G+ 
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 559 NEAFRIMQRAS 569
           +EA  +++  S
Sbjct: 408 DEAVMLLKSMS 418



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ GL D   ++   M S G  PN+      +     AG+   A+ L+SQ 
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   +N+L+N L K+   ++A+ + K+       PD  +++ +I GL + G+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
           ++A E    M + G SP+ + Y+++   L R   VN+V +  + +K+   +S    D V 
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS----DAVL 568

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +VIS  CK  + D+A   +  M S G  P+  T+ +LI G    G    A+ +   + 
Sbjct: 569 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628

Query: 395 SFGYL 399
           S G L
Sbjct: 629 SRGAL 633



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 128/290 (44%), Gaps = 14/290 (4%)

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +V YN +++G CR  ++A    L   V       P+  T+  V+ G C  G++  A  + 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +EM+  G  P    ++V+++   + G   ++  + E M + G   D    + +++  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G +++ + L  ++       ++ ++  ++  LC   R  D    + ++   D  P    +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I   C+ G  +  + ++A+M E  C PD   +  +I G C +G +  A  I N+M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
            G  P+ +  N+++  L             +R  E + L    ++K  PL
Sbjct: 315 YGLKPNVVCYNTVLKGLCSA----------ERWKEAEELLSEMFQKDCPL 354


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 211/411 (51%), Gaps = 7/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  V+R LC  G       V D M   G  P  PM    + +  R+G    +  +L   
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRI 274
                T+ T   N +LNA+ +Q   DEAV + ++      + D  ++N +++GL    R 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+V+   E   +M    C+P+IVT+NTLI  LCR     R HE+L ++  +   +PD+  
Sbjct: 233 GDVE---ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS-EHGCTPDIRM 288

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G CK G ++ A  I N M S G+KP+ V +N ++ G         AE +   M 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 D VTF+ L+D +C+NG +++ ++L ++M      P+V T+T +IN  CKE  ++
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A   LK +      P    Y  V+ G C AG   +A  ++++M ++ C P+ VTF  LI
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              C KG + +AI +  +ML  GC+PD I+ +++I  L K G   EA  ++
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 188/394 (47%), Gaps = 3/394 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV+ + N    T+N ++  LC  GL + V  V   M   G  P+  M    +    +
Sbjct: 241 EMVRVDCAPN--IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICK 298

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G  + A  +L++     +  +   YN++L  L       EA  +  E F+     D  T
Sbjct: 299 EGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G V +  E    M S GC PD++TY T+I+G C+   +     LLK + 
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P+ V+YT V+ G C  G+   A  + ++M   G  P+ VTFN LI+   K G +
Sbjct: 419 -SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++ML  G  PD++++S++IDG  + G+  + L+L + M  K +SPN   ++ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
             AL +E R+N   +    +K   +     +YN VI   CK    D A    A M    C
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            P++ T+T+LI G   +G   EA  + +++   G
Sbjct: 598 MPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 196/410 (47%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V++ LC       V+ + D M      PN       +    R G  +    +L+Q 
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T    MY ++++ + K+ + + A  +         +P+   +N +++GL      
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E   +M    C  D VT+N L+   C+   V R  ELL+++       PDV+TYT+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LSHGCMPDVITYTT 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M+SCG KP+ V++ +++ G    G  V AE +  +M+  G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VTF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K  +  +A 
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +     + G V++   +   +++   + D V +  +I   
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +     AI  F  M+  GC P++ T   LI  L   G+  EA  ++  
Sbjct: 577 CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 1/311 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+ +TF  +++GL   G +  A E   +M   GC+P    Y+ ++   CR         +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+ +  K   + D      V++  C+ G +D+A G+  ++   G +   V++N ++ G  
Sbjct: 169 LEAMHAKG-CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
                   E + + M+     P++VTF++LI   CRNG   +  ++  +M     +P++ 
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +I+ +CKE  L  A   L ++    L P    YN V+ G C A    EA  +++EM
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +K C  D VTF IL+   C  G +   I +  +ML  GC PD IT  ++I+   K G+ 
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 559 NEAFRIMQRAS 569
           +EA  +++  S
Sbjct: 408 DEAVMLLKSMS 418



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ GL D   ++   M S G  PN+      +     AG+   A+ L+SQ 
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   +N+L+N L K+   ++A+ + K+       PD  +++ +I GL + G+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
           ++A E    M + G SP+ + Y+++   L R   VN+V +  + +K+   +S    D V 
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS----DAVL 568

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +VIS  CK  + D+A   +  M S G  P+  T+ +LI G    G    A+ +   + 
Sbjct: 569 YNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELC 628

Query: 395 SFGYL 399
           S G L
Sbjct: 629 SRGAL 633



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 128/290 (44%), Gaps = 14/290 (4%)

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +V YN +++G CR  ++A    L   V       P+  T+  V+ G C  G++  A  + 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVL 134

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +EM+  G  P    ++V+++   + G   ++  + E M + G   D    + +++  C  
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G +++ + L  ++       ++ ++  ++  LC   R  D    + ++   D  P    +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I   C+ G  +  + ++A+M E  C PD   +  +I G C +G +  A  I N+M  
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
            G  P+ +  N+++  L             +R  E + L    ++K  PL
Sbjct: 315 YGLKPNVVCYNTVLKGLCSA----------ERWKEAEELLSEMFQKDCPL 354


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 214/418 (51%), Gaps = 8/418 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++NH+  TY  ++  LC+  L D    +   M+S G  P + +    +    RAG+   A
Sbjct: 77  AVNHT--TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHA 134

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
            G+  Q            Y  L++ L K     +AV + +E       PD  T  +++Q 
Sbjct: 135 LGVYRQMNDAHPP-DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQS 193

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L     V  A E   +M   G + + +TY+ L+ GLC+   +     LL     +  F+P
Sbjct: 194 LCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTP 253

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+VTY++VI G CK G++  A  I+ EM SC   P+A+T+N LI G+ + G+M  A  + 
Sbjct: 254 DIVTYSTVIDGLCKAGRLRDAVDIFEEM-SCA--PTAITYNSLIGGYCRAGDMDEAIRLL 310

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            +M+     PDV+T+++L+  +C+ G+L+   +L  +M    LSP+V TFT L++ LC E
Sbjct: 311 GKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 370

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R+ DA   L+++      P  + YN V+DG+CK+  V +A  +VA+   +   P+ VT+
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430

Query: 511 TILIIGHCMKGRMVEAISIFNKM-LRIGCAPDDITVNSLI-SCLLKGGMPNEAFRIMQ 566
            IL+ G C  GR  +A+   +++    G  P  + + ++I   L + G  ++A +  +
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYE 488



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 218/422 (51%), Gaps = 11/422 (2%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           + ++N +    F TY  ++  L + G L D+VQV+ + M S  H+P++  +   V S   
Sbjct: 138 YRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQE-MVSARHVPDNTTLTVVVQSLCL 196

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-YMFKEYFRLYSQPDTW 262
             + D A+ L+ +     +  +   Y++L++ L K    DEAV  +  E  R    PD  
Sbjct: 197 GDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIV 256

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T++ +I GL + G ++ A + F +M    C+P  +TYN+LI G CR  ++     LL ++
Sbjct: 257 TYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 313

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                 +PDV+TYT+++S +CK+G++D A  ++ +M +  + P  VTF  L+DG    G 
Sbjct: 314 -VDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  A  + E +   G  P + T++ ++DGYC++ Q+ +  +L  + + +   PN  T+ I
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKP---FMYNPVIDGFCKAGNVDEANVIVAEME 499
           L+   C+  R + A ++L QL  ++  P P    MY  ++D  C+ G  D+A     EM 
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLN-SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 491

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           ++   P   TF  ++   C   +  +A  +  +M++ G  P   T ++++S   + GM  
Sbjct: 492 QRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQ 551

Query: 560 EA 561
           +A
Sbjct: 552 KA 553



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 204/409 (49%), Gaps = 7/409 (1%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N ++  LC+     +   +FD M   G + ++         C +A   D A GLL   + 
Sbjct: 50  NTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLC-KARLLDEAMGLLLDMKS 108

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +   T ++N ++  L +      A+ ++++    +  PD  T+  L+ GLS+ G ++ 
Sbjct: 109 RGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKAGRLRD 167

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A +   +M S    PD  T   ++  LC  + V    EL++E+  +   + + +TY++++
Sbjct: 168 AVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG-MAANAITYSALV 226

Query: 340 SGYCKLGKMDKATGIY-NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
            G CK  ++D+A  +   E+   G  P  VT++ +IDG  K G +  A  + E M     
Sbjct: 227 DGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SC 283

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P  +T++SLI GYCR G +++ ++L  +M   N +P+V T+T L++A CK  RL+DA  
Sbjct: 284 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYE 343

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             +Q+  N L P    +  ++DG C  G +++A  ++ E+  + C P   T+  ++ G+C
Sbjct: 344 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 403

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              ++ +A  +       G  P+ +T N L++   + G  ++A + + +
Sbjct: 404 KSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 452



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 164/314 (52%), Gaps = 8/314 (2%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYD-MGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           D+ TF ++++GL    +++       D +   G SPD V  NT+++ LC   +      L
Sbjct: 9   DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMAL 68

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
               K     + +  TY ++I   CK   +D+A G+  +M S G+ P  +  NV+I G  
Sbjct: 69  FD--KMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLC 126

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G +  A  +  R ++  + PD +T++ L+ G  + G+L   +++  EM      P+  
Sbjct: 127 RAGRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-NVIVAE 497
           T T+++ +LC  +R++DAR  ++++    +      Y+ ++DG CK   +DEA  +++ E
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           +  +   PD VT++ +I G C  GR+ +A+ IF +M    CAP  IT NSLI    + G 
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGD 302

Query: 558 PNEAFRIMQRASED 571
            +EA R++ +  +D
Sbjct: 303 MDEAIRLLGKMVDD 316



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 11/338 (3%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLP 189
           +RLD   + L   E +R   + +    TY+ V+  LC+ G L D+V + F+ M      P
Sbjct: 233 ERLDE-AVALLLGEVTRRGFTPD--IVTYSTVIDGLCKAGRLRDAVDI-FEEMSC---AP 285

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
            +      +    RAG  D A  LL +            Y +L++A  K    D+A  +F
Sbjct: 286 TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELF 345

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           ++       PD  TF  L+ GL   G ++ A E   ++   GC P I TYN ++ G C+ 
Sbjct: 346 QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKS 405

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG--IKPSA 367
           N+V +  EL+ + + +  F P+ VTY  +++G C+ G+ D+A    +++NS G     S 
Sbjct: 406 NQVRKAEELVADFRSRG-FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSV 464

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             + +++D   + G    A    E M+  GY+P   TF++++   C+  Q  Q  +L +E
Sbjct: 465 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 524

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           M     +P   T   +++A C+   +  A     +L+ 
Sbjct: 525 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 220/437 (50%), Gaps = 23/437 (5%)

Query: 156 FKTYNLVMRSLCEMG------LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+++ S+C  G        +  +  ++ M S G + N   +  F       GK + 
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK 472

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +         T  Y+ ++  L   +  + A ++FKE       PD +T+ ILI 
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
             S+ G +K+A  +  +M   GC P +VTY TLI    +  +V+  +EL + +  K  F 
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCF- 591

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+V+TYT++I GYCK G ++KA  IY  M                N+   KP+ VT+  L
Sbjct: 592 PNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +DG  K   +  A  + E M   G  P+ + + +LIDG+C+  +L++  ++  +M     
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +PNVYT++ LI+ L K+ RL+   + L ++  N   P   +Y  +IDG  K    DEA  
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYK 771

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++  MEEK CKP+ VT+T +I G    G++ + + +F +M   GCAP+ +T   LI+   
Sbjct: 772 LMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCC 831

Query: 554 KGGMPNEAFRIMQRASE 570
             G  +EA+ +++   +
Sbjct: 832 ATGHLDEAYALLEEMKQ 848



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 198/435 (45%), Gaps = 23/435 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LCE    +      + MRS   +PN       +  C+   +    K +LS   
Sbjct: 311 YNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMI 370

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 S  ++NSL++A  K ++   A  + K+  +   +P    +NILI  +   GE+ 
Sbjct: 371 AEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELP 430

Query: 279 KAFEF------FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
               F      + +M S G   + V   +    LC   +  + ++++ E+   + F PD 
Sbjct: 431 GPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM-MGNGFVPDT 489

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY+ VI   C   +++ A  ++ EM   G+ P   T+ +LID F K G +  A    + 
Sbjct: 490 STYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDE 549

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G  P VVT+++LI  Y +  +++   +L + M  K   PNV T+T LI+  CK   
Sbjct: 550 MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGN 609

Query: 453 LNDARRFLKQLKWNDLVP--------------KP--FMYNPVIDGFCKAGNVDEANVIVA 496
           +  A +   +++ +  +P              KP    Y  ++DG CKA  V +A  ++ 
Sbjct: 610 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 669

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M    C+P+ + +  LI G C   ++ EA  +F+KM+  G  P+  T +SLI  L K  
Sbjct: 670 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDK 729

Query: 557 MPNEAFRIMQRASED 571
             +   +++ +  E+
Sbjct: 730 RLDLVLKVLSKMLEN 744



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 211/502 (42%), Gaps = 47/502 (9%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY--------------- 159
           R   +KL+P   +E++  L +P+L +KF  ++   +  +H+   Y               
Sbjct: 130 RQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRV 189

Query: 160 --------------------NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
                               N+++R  C  GL +        ++  G+ P        V 
Sbjct: 190 PEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQ 249

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQ 258
             +RA K D A+ +  +     ++M  F       AL K     EA+ +  KE F     
Sbjct: 250 VFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDF----V 305

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+T  +N +I GL      ++A +F   M S  C P++ TY  L+ G     ++ R   +
Sbjct: 306 PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRI 365

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +  +  + P    + S++  YCK      A  +  +M  C  KP  V +N+LI    
Sbjct: 366 LSMMIAEGCY-PSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424

Query: 379 KVGNMVS------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
             G +        AE     MLS G + + V   S     C  G+  +  K+  EM G  
Sbjct: 425 SGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNG 484

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             P+  T++ +I  LC  +R+ +A    K++K   +VP  + Y  +ID F KAG + +A+
Sbjct: 485 FVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH 544

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             + EM    C+P  VT+T LI  +    ++  A  +F  M+  GC P+ IT  +LI   
Sbjct: 545 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 604

Query: 553 LKGGMPNEAFRIMQRASEDQNL 574
            K G   +A +I  R   D ++
Sbjct: 605 CKSGNIEKACQIYARMRGDADI 626



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 193/412 (46%), Gaps = 30/412 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G  +    ++  MR D  +P+  M  F + + +               
Sbjct: 596 TYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY-FKIKNNVAE------------- 641

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +P  VT     Y +L++ L K +   +A  + +  F    +P+T  ++ LI G  +  ++
Sbjct: 642 KPNVVT-----YGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F+ M   G +P++ TY++LI  L +   +    ++L ++  ++  +P++V YT 
Sbjct: 697 DEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM-LENSCAPNIVIYTE 755

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K+ K D+A  +   M   G KP+ VT+  +IDGFGK G +     +   M S G
Sbjct: 756 MIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG 815

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VT++ LI+  C  G L++   L +EMK      +V ++  +I    +E  L+   
Sbjct: 816 CAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLG- 874

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-----NVIVAEMEEKRCKPDKVTFTI 512
             L++++ N   P   +Y  +ID F KAG ++ A      VI A M        K  +T 
Sbjct: 875 -LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMS---MAAKKNLYTS 930

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           LI       ++  A  +F  M+R G  PD  T   L+  L++     EA ++
Sbjct: 931 LIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 5/313 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++   C+    D  Q VF  M   G+ PN       +    +  + D    +LS+ 
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +Y  +++ L K    DEA  +         +P+  T+  +I G  + G+V
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            K  E F +MGS GC+P+ VTY  LI+  C    +   + LL+E+K ++ +   V +Y  
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK-QTYWPKHVSSYCK 860

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS-- 395
           VI GY +  +   + G+  E+   G  P  + + VLID F K G +  A  + + ++S  
Sbjct: 861 VIEGYKR--EFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISAS 918

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                    ++SLI  +    ++    +L  +M    + P++ TF  L+  L +  R  +
Sbjct: 919 MSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEE 978

Query: 456 ARRFLKQLKWNDL 468
           A +    L   D+
Sbjct: 979 ALQLSDSLCQMDI 991



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 40/381 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+       + + + M  DG  PN+ + +  +    +A K D A+ +  + 
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + + Y+SL++ L K    D  + +  +       P+   +  +I GLS++ + 
Sbjct: 707 VEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++    M   GC P++VTY  +I G  +  +V +  EL +E+  K   +P+ VTYT 
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKG-CAPNFVTYTV 825

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C  G +D+A  +  EM          ++  +I+G           Y RE +LS G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEG-----------YKREFILSLG 874

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            L +V           +NG                 +P +  + +LI+   K  RL  A 
Sbjct: 875 LLEEVE----------KNGS----------------APIILLYKVLIDNFVKAGRLEVAL 908

Query: 458 RFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
              K++      +  K  +Y  +I  F  A  +  A  +  +M      PD  TF  L++
Sbjct: 909 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968

Query: 516 GHCMKGRMVEAISIFNKMLRI 536
           G     R  EA+ + + + ++
Sbjct: 969 GLIRVRRWEEALQLSDSLCQM 989


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 221/438 (50%), Gaps = 25/438 (5%)

Query: 156 FKTYNLVMRSLCE------MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+ + S+C         + D V+  +  M   G + N   +  F      AGK D 
Sbjct: 384 YLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQ 443

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +            Y+ ++  L   +  ++A  +F+E  R    P  +T+ ILI 
Sbjct: 444 AFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILID 503

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A ++F +M   GC+P++VTY  LI    +  ++    EL  E+       
Sbjct: 504 SFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF-EMMLLEGCK 562

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM-----------------NSCGIKPSAVTFNV 372
           P+VVTYT++I G+CK G+++KA  IY  M                 N+C   P+ +T+  
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCE-GPNVITYGA 621

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L+DG  K   +  A  + + ML+ G  P+ + + ++IDG+C+ G+L    ++  +M  + 
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
            SPN+YT++  I+ L K+NRL+   + L ++  N   P   +Y  ++DG CK G  DEA 
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++ +MEEK C P+ VT+T +I G    G++ + + +F  M   GCAP+ IT   LI+  
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC 801

Query: 553 LKGGMPNEAFRIMQRASE 570
              G+ +EA++++    +
Sbjct: 802 CSNGLLDEAYKLLDEMKQ 819



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 202/438 (46%), Gaps = 29/438 (6%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LCE  L +    +   MRS   +PN       +S C+R G+    K +LS   
Sbjct: 282 YNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMI 341

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE-- 276
                 +  ++NSL++A  K  +   A  +FK+  +   QP    +NI I  +    E  
Sbjct: 342 TEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQP 401

Query: 277 -------VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
                  V+KA+    +M   G   + V  +     LC   +  +  +++ E+  K  F 
Sbjct: 402 SSDILDLVEKAYS---EMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKG-FV 457

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD  TY+ VI   C   K++KA  ++ EM   GI PS  T+ +LID F K G +  A   
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + ML  G  P+VVT+++LI  Y +  Q+    +L + M  +   PNV T+T LI+  CK
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577

Query: 450 ENRL----------------NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
             ++                +D  ++ K    N   P    Y  ++DG CKA  V EA+ 
Sbjct: 578 AGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++  M    C+P+++ +  +I G C  G++ +A  +F KM   G +P+  T +S I CL 
Sbjct: 638 LLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697

Query: 554 KGGMPNEAFRIMQRASED 571
           K    +   +++ +  E+
Sbjct: 698 KDNRLDLVLKVLSKMLEN 715



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 218/488 (44%), Gaps = 46/488 (9%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL-CEMGLHDSVQVVFDY-MRS 184
           +EV+  + NP+L +KF  ++   +  +H+ + ++ ++  L C +   D V + F   ++ 
Sbjct: 110 VEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKD 169

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           D H     ++ F V  C R G  + A   L + +      S   YN+L+   ++ +  D 
Sbjct: 170 DDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDT 229

Query: 245 AV--------YMF--------------------KEYFRLYSQ-----PDTWTFNILIQGL 271
           A         Y F                    +E F L  +     PDT  +N ++ GL
Sbjct: 230 AYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGL 289

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
                 ++A +  + M S  C P++VTY  L+SG  R  ++ R   +L  +  +  + P+
Sbjct: 290 CEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCY-PN 348

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF--------GKVGNM 383
              + S+I  YCK      A  ++ +M  CG +P  + +N+ I             + ++
Sbjct: 349 REIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDL 408

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           V   Y    ML  G + + V  S+     C  G+ +Q  K+  EM GK   P+  T++ +
Sbjct: 409 VEKAY--SEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKV 466

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I  LC  +++  A    +++K N +VP  + Y  +ID FCKAG + +A     EM  K C
Sbjct: 467 IGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGC 526

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P+ VT+T LI  +    +M  A  +F  ML  GC P+ +T  +LI    K G   +A +
Sbjct: 527 TPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQ 586

Query: 564 IMQRASED 571
           I  R   D
Sbjct: 587 IYARMRGD 594



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 207/463 (44%), Gaps = 56/463 (12%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++ S C+ GL    +  FD M   G  PN       + + ++A +   A  L 
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF------------KEYFRLYSQ---- 258
                     +   Y +L++   K    ++A  ++             +YF+L       
Sbjct: 554 EMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEG 613

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+  T+  L+ GL +   VK+A E    M + GC P+ + Y+ +I G C++ ++    E+
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDG 376
             ++  +  +SP++ TY+S I    K  ++D    + ++M  NSC   P+ V +  ++DG
Sbjct: 674 FTKMSERG-YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSC--TPNVVIYTEMVDG 730

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K+G    A  +  +M   G  P+VVT++++IDG+ ++G++ Q L+L  +M  K  +PN
Sbjct: 731 LCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPN 790

Query: 437 VYTFTILINALCKENRLNDARRFLKQLK---W---------------------------- 465
             T+ +LIN  C    L++A + L ++K   W                            
Sbjct: 791 FITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDEL 850

Query: 466 --NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE--KRCKPDKVTFTILIIGHCMKG 521
             N+ VP   +Y  +ID + KAG ++ A  ++ E+         +K  +  LI       
Sbjct: 851 SENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHAS 910

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ++ +A+ ++  M+     P+   +  LI  L+K     EA ++
Sbjct: 911 KVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 218/434 (50%), Gaps = 11/434 (2%)

Query: 140 LKFLEFSRVNLS---LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           LK +E S   +S   +     T+N+++++LC         ++ + M S G +P+      
Sbjct: 170 LKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +   I  G  D A  +  Q      + S    N +++   K+   ++A+   +E   + 
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE---MS 286

Query: 257 SQ----PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
           +Q    PD +TFN L+ GL + G VK A E    M   G  PD+ TYN++ISGLC++ EV
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               E+L ++    + SP+ VTY ++IS  CK  ++++AT +   + S GI P   TFN 
Sbjct: 347 KEAVEVLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LI G     N   A  + E M S G  PD  T++ LID  C  G+L++ L +  +M+   
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
            + +V T+  LI+  CK N+  +A     +++ + +      YN +IDG CK+  V++A 
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++ +M  +  KPDK T+  L+   C  G + +A  I   M   GC PD +T  +LIS L
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585

Query: 553 LKGGMPNEAFRIMQ 566
            K G    A ++++
Sbjct: 586 CKAGRVEVASKLLR 599



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 214/451 (47%), Gaps = 48/451 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM------RSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           T+ +++ S  +  L D +  V D+M      + D H  N  +      + ++  +   AK
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             +   +P    +STF  N L+ AL + +    A+ M ++       PD  TF  ++QG 
Sbjct: 180 MSVWGIKPD---VSTF--NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234

Query: 272 SRIGEVKKAFEFFYDMGSFGCS------------------------------------PD 295
              G++  A      M  FGCS                                    PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
             T+NTL++GLC+   V    E++ +V  +  + PDV TY SVISG CKLG++ +A  + 
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIM-DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           ++M +    P+ VT+N LI    K   +  A  +   + S G LPDV TF+SLI G C  
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
                 ++L +EM+ K   P+ +T+ +LI++LC + +L++A   LKQ++ +        Y
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +IDGFCKA    EA  I  EME      + VT+  LI G C   R+ +A  + ++M+ 
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G  PD  T NSL++   +GG   +A  I+Q
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 207/427 (48%), Gaps = 13/427 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           KT+  VM+   E G  D    + + M   G   ++  +   V    + G+ + A   + +
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284

Query: 217 ------FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
                 F P + T     +N+L+N L K  +   A+ +     +    PD +T+N +I G
Sbjct: 285 MSNQDGFFPDQYT-----FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L ++GEVK+A E    M +  CSP+ VTYNTLIS LC+ N+V    EL + +  K    P
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG-ILP 398

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DV T+ S+I G C       A  ++ EM S G +P   T+N+LID     G +  A  M 
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           ++M   G    V+T+++LIDG+C+  +  +  ++ DEM+   +S N  T+  LI+ LCK 
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R+ DA + + Q+      P  + YN ++  FC+ G++ +A  IV  M    C+PD VT+
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             LI G C  GR+  A  +   +   G        N +I  L +     EA  + +   E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 571 DQNLQLP 577
            QN   P
Sbjct: 639 -QNEAPP 644



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 191/403 (47%), Gaps = 3/403 (0%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + N+++   C+ G + D++  + +    DG  P+       V+   +AG    A  ++  
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                     + YNS+++ L K     EAV +  +       P+T T+N LI  L +  +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V++A E    + S G  PD+ T+N+LI GLC         EL +E++ K    PD  TY 
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYN 439

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I   C  GK+D+A  +  +M   G   S +T+N LIDGF K      AE + + M   
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   + VT+++LIDG C++ ++    +L D+M  +   P+ YT+  L+   C+   +  A
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              ++ +  N   P    Y  +I G CKAG V+ A+ ++  ++ K        +  +I G
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619

Query: 517 HCMKGRMVEAISIFNKMLRIGCA-PDDITVNSLISCLLKGGMP 558
              K +  EAI++F +ML    A PD ++   +   L  GG P
Sbjct: 620 LFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 1/206 (0%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P    +  ++   G+ G+    + + E M S        TF  LI+ Y +    ++ L +
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 425 CDEMKGK-NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
            D M  +  L P+ + +  ++N L   N L        ++    + P    +N +I   C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           +A  +  A +++ +M      PD+ TFT ++ G+  +G +  A+ I  +M+  GC+  ++
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRAS 569
           +VN ++    K G   +A   +Q  S
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMS 286



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 7/177 (3%)

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P+   +  ++    R+G  +   K+ ++MK         TF ILI +   +  L D  
Sbjct: 79  FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA-QFELQD-- 135

Query: 458 RFLKQLKWN----DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             L  + W      L P    YN +++      ++    +  A+M     KPD  TF +L
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           I   C   ++  AI +   M   G  PD+ T  +++   ++ G  + A RI ++  E
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 204/404 (50%), Gaps = 2/404 (0%)

Query: 162 VMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           ++ ++ +MG  +D V  +   M   G  PN   +  F++   +  + D    +L++    
Sbjct: 98  LLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKL 157

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
            +  +   + +L+N L K     +AV +F +      QPD +T+N +I GL +IGE   A
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAA 217

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
                 M   GC P++VTY+TLI  LCR   V    ++   +K K   SPD+ TYTS+I 
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG-ISPDIFTYTSLIQ 276

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G CK  +  +A+ + NEM S  I P  VTFNVL+D F K G +  A  + + M   G  P
Sbjct: 277 GLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEP 336

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           +VVT+SSL+ GY     + +  KL   M  K   PN++++ ILIN  CK  R+++A +  
Sbjct: 337 NVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLF 396

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++    L P    YN +I GFC+ G + EA  +   M      PD  T++IL+ G C +
Sbjct: 397 NEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQ 456

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G + +A  +F  M      P+ +    L+  + K G   +A ++
Sbjct: 457 GYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKL 500



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 184/359 (51%), Gaps = 1/359 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC++G   +   +   M   G  PN       + S  R    + A  + S  
Sbjct: 200 TYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM 259

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   ++   F Y SL+  L K +   EA  +  E   L   PD  TFN+L+    + G+V
Sbjct: 260 KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKV 319

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G  P++VTY++L+ G     +V    +L   V       P++ +Y  
Sbjct: 320 SEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF-HVMITKGCKPNIFSYNI 378

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  ++D+A  ++NEM   G+ P+ V++N LI GF ++G +  A+ +   M + G
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG 438

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD+ T+S L+DG+C+ G L +  +L   M+   L PN+  +TIL++A+CK     DAR
Sbjct: 439 NLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDAR 498

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +   +L    L P   +Y  +I+G CK G +DEA      ME   C PD++++ ++I G
Sbjct: 499 KLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG 557



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 182/347 (52%), Gaps = 2/347 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +  LL+A+VK     + V    +   L    P+ +T +I +    ++  V   F     +
Sbjct: 95  FAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKV 154

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  P IVT+ TLI+GLC+V E A+  EL  ++  K    PDV TY ++I+G CK+G+
Sbjct: 155 IKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG-CQPDVYTYNTIINGLCKIGE 213

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
              A G+  +M   G +P+ VT++ LID   +   +  A  +   M + G  PD+ T++S
Sbjct: 214 TAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTS 273

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI G C+  +  +   L +EM   N+ P++ TF +L++  CKE ++++A   LK +    
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    Y+ ++ G+    +V EA  +   M  K CKP+  ++ ILI G+C   R+ EA+
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            +FN+M+  G  P++++ N+LI    + G   EA  + +    + NL
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNL 440



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 178/325 (54%), Gaps = 2/325 (0%)

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA-FEFFYDMGSFGCSPDIVTY 299
           N D+A+  F         P    F  L+  + ++G+           M   G SP+I T 
Sbjct: 72  NIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTL 131

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           +  ++  C++  V  G  +L +V  K    P +VT+T++I+G CK+G+  +A  ++++M 
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKV-IKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           + G +P   T+N +I+G  K+G   +A  + ++M   G  P++VT+S+LID  CR+  +N
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L +   MK K +SP+++T+T LI  LCK +R  +A   L ++   +++P    +N ++
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D FCK G V EA  ++  M E   +P+ VT++ L+ G+ +   +VEA  +F+ M+  GC 
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCK 370

Query: 540 PDDITVNSLISCLLKGGMPNEAFRI 564
           P+  + N LI+   K    +EA ++
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQL 395



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 1/242 (0%)

Query: 330 PDVVTYTSVISGYCKLGKM-DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           P ++ +  ++S   K+G+  D    +  +M   G+ P+  T ++ ++ F ++  +     
Sbjct: 90  PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +++  G  P +VTF++LI+G C+ G+  Q ++L D+M  K   P+VYT+  +IN LC
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K      A   LK+++     P    Y+ +ID  C+   V+EA  I + M+ K   PD  
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIF 269

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+T LI G C   R  EA ++ N+M  +   PD +T N L+    K G  +EA  +++  
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329

Query: 569 SE 570
           +E
Sbjct: 330 TE 331



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 137/315 (43%), Gaps = 36/315 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++ LC+         + + M S   +P+       V +  + GK   A G+L   
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329

Query: 218 -----RPGEVTMSTFMY------------------------------NSLLNALVKQNNA 242
                 P  VT S+ MY                              N L+N   K    
Sbjct: 330 TEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRI 389

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           DEA+ +F E       P+  ++N LI G  ++G++++A + F +M + G  PD+ TY+ L
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + G C+   + +   L + ++  +   P++V YT ++   CK G    A  +++E+   G
Sbjct: 450 LDGFCKQGYLGKAFRLFRAMQ-STYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG 508

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++P    +  +I+G  K G +  A      M + G  PD ++++ +I G  ++   ++ L
Sbjct: 509 LQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRAL 568

Query: 423 KLCDEMKGKNLSPNV 437
            L  EM+ +    +V
Sbjct: 569 LLVGEMRDRGFIADV 583


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 209/410 (50%), Gaps = 1/410 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           ++  Y+L++R+ CE+   D     FD M+  G +P+       +S  +++ + + A  L 
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++     +  S   +N ++N L K+    +A         L  +P+  T+N +I G    
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V+ A   F  M   G  PD  TY + ISG+C+  ++     +L+++K +    P  VT
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMK-EIGLRPTAVT 298

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I GYC  G ++ A    ++M   G+ P+  T+N+LI        M  A+ + + M 
Sbjct: 299 YNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMS 358

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G +PD VT++ LI+GYCR G + +   L DEM  K + P   T+T LI  L K  R+ 
Sbjct: 359 EKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMK 418

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    +++    + P   M+N +IDG C  GN+D A  ++ EM++ +  PD+VTF  L+
Sbjct: 419 QADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLM 478

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            G C +G++  A  +  +M   G  PD I+ N+LIS   K G   +AFR+
Sbjct: 479 QGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRV 528



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 203/403 (50%), Gaps = 7/403 (1%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           + +  S  T+N+++  LC+ G     +     M + G  PN       +      G+ + 
Sbjct: 185 MRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEG 244

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+ +    +   V   ++ Y S ++ + K+   +EA  M ++   +  +P   T+N LI 
Sbjct: 245 ARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLID 304

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL---CRVNEVARGHELLKEVKFKS 326
           G    G ++ AF++   M   G  P + TYN LI  L   C+++E A G  ++KE+  K 
Sbjct: 305 GYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE-ADG--IIKEMSEKG 361

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD VTY  +I+GYC+ G + KA  +++EM S GI+P+ VT+  LI    K G M  A
Sbjct: 362 -LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + + E+++  G  PD++ F++LIDG+C NG +++   +  EM    + P+  TF  L+  
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQG 480

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            C+E ++  AR  ++++K   + P    YN +I G+ K G++ +A  +  EM      P 
Sbjct: 481 RCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPT 540

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            +T+  LI G C       A  +  +M+  G  P+D T  SLI
Sbjct: 541 LLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 209/435 (48%), Gaps = 18/435 (4%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           S ++ +L    KT +L  + +  +G  D  ++     M    H PNS      +   I +
Sbjct: 38  SLISTALTSLHKTPDLAFQFVTHIGFGDLDIKSKCLAMAVISHAPNSKPSLQLLKETINS 97

Query: 205 G---------KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           G         +   A+G+L          +  +Y+ L+ A  +    D+A   F      
Sbjct: 98  GVYSIREVFNELGVARGVLG-------IKTYVLYDLLIRACCELKRGDDAFECFDMMKGK 150

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P     N ++    +    +KA+  + +M        +VT+N +I+ LC+  ++ + 
Sbjct: 151 GVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKA 210

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            E +  ++      P+VVTY ++I GYC  G+++ A  I++ M   G+KP + T+   I 
Sbjct: 211 KEFIGLMEALG-IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFIS 269

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  K G +  A  M E+M   G  P  VT+++LIDGYC  G L       D+M  + L P
Sbjct: 270 GMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP 329

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
            V T+ +LI+AL  + ++++A   +K++    LVP    YN +I+G+C+ GNV +A  + 
Sbjct: 330 TVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLH 389

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            EM  K  +P +VT+T LI     +GRM +A  +F K++R G  PD I  N+LI      
Sbjct: 390 DEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCAN 449

Query: 556 GMPNEAFRIMQRASE 570
           G  + AF +++   +
Sbjct: 450 GNMDRAFAMLKEMDQ 464



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 177/367 (48%), Gaps = 1/367 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L +  +  TYN ++   C  G  +  +++FD M+  G  P+S     F+S   + GK + 
Sbjct: 220 LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A G+L + +   +  +   YN+L++    + N + A     +  R    P   T+N+LI 
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIH 339

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L    ++ +A     +M   G  PD VTYN LI+G CR   V +   L  E+  K    
Sbjct: 340 ALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG-IQ 398

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P  VTYTS+I    K G+M +A  ++ ++   GI P  + FN LIDG    GNM  A  M
Sbjct: 399 PTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAM 458

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + M     +PD VTF++L+ G CR G++    +L +EMK + + P+  ++  LI+   K
Sbjct: 459 LKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSK 518

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              + DA R   ++      P    YN +I G CK    D A  ++ EM  K   P+  T
Sbjct: 519 RGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNT 578

Query: 510 FTILIIG 516
           +  LI G
Sbjct: 579 YLSLIEG 585



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 1/223 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C  G       + D M S G  P        +    + G+   A  L  + 
Sbjct: 368 TYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     M+N+L++      N D A  M KE  ++   PD  TFN L+QG  R G+V
Sbjct: 428 VRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKV 487

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E   +M S G  PD ++YNTLISG  +  ++     +  E+     F+P ++TY +
Sbjct: 488 EAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM-LSIGFNPTLLTYNA 546

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           +I G CK  + D A  +  EM S GI P+  T+  LI+G G V
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 210/414 (50%), Gaps = 2/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++   C +G       V   +   G+ PN+ ++   +      G+   +     + 
Sbjct: 169 TLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKV 228

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 M+   Y +LLN L K      A+ + +      ++PD   +N +I GL +   V
Sbjct: 229 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLV 288

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++F+ +M S G  PD++TY+TLI G C   ++     LL E+  K+  +PDV TYT 
Sbjct: 289 NEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN-INPDVYTYTI 347

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK GK+ +A  +   M   G+KP+ VT++ L+DG+  VG + +A+ +   M+   
Sbjct: 348 LIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V +++ +I+G C+   +++ + L  EM  KN+ PN  T+  LI+ LCK  R+  A 
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +K+L           Y  ++DG CK  N+D+A  +  +M+E+  +P+K T+T LI G 
Sbjct: 468 DLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C   R+  A  +F  +L  GC  D  T N +I  L K GM +EA   M+   ED
Sbjct: 528 CKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALA-MKSKMED 580



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 180/356 (50%), Gaps = 36/356 (10%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+  L +     +  M S G  P     +    S +  G C A + L+  F 
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP-----DVITYSTLICGFCLAGQ-LMGAF- 327

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                       SLLN +  +N                  PD +T+ ILI  L + G++K
Sbjct: 328 ------------SLLNEMTLKN----------------INPDVYTYTILIDALCKEGKLK 359

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A      M   G  P++VTY+TL+ G C V EV    ++   +  ++E +P V +Y  +
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAM-VQTEVNPSVCSYNIM 418

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+G CK   +D+A  +  EM    + P+ VT+N LIDG  K G + SA  + + +   G 
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQ 478

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             DV+T++SL+DG C+N  L++ + L  +MK + + PN YT+T LI+ LCK  RL +A++
Sbjct: 479 PADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQK 538

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
             + +         + YN +I G CK G +DEA  + ++ME+  C PD VTF I+I
Sbjct: 539 LFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIII 594



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 184/365 (50%), Gaps = 8/365 (2%)

Query: 208 DAAKGLLSQFRPGEVTM----STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           D     +SQF  G + M    S   +  +L +LVK  +   A+ + K+      +PD  T
Sbjct: 111 DVVHDAVSQFN-GMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVT 169

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            +ILI     +G++  +F     +   G  P+ +   TL+ GLC   EV +      +V 
Sbjct: 170 LSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVV 229

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +  F  + V+Y ++++G CK+G+   A  +   +     +P  V +N +IDG  K   +
Sbjct: 230 AQG-FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLV 288

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A      M S G  PDV+T+S+LI G+C  GQL     L +EM  KN++P+VYT+TIL
Sbjct: 289 NEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTIL 348

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ALCKE +L +A+  L  +    + P    Y+ ++DG+C  G V  A  I   M +   
Sbjct: 349 IDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408

Query: 504 KPDKVTFTILIIGHCMKGRMV-EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            P   ++ I+I G C KG+ V EA+++  +ML     P+ +T NSLI  L K G    A 
Sbjct: 409 NPSVCSYNIMINGLC-KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467

Query: 563 RIMQR 567
            +M+ 
Sbjct: 468 DLMKE 472



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 1/283 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    TY +++ +LC+ G     + +   M  +G  PN       +      G+   A
Sbjct: 337 NINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNA 396

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K +       EV  S   YN ++N L K  + DEA+ + +E       P+T T+N LI G
Sbjct: 397 KQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDG 456

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +  A +   ++   G   D++TY +L+ GLC+   + +   L  ++K +    P
Sbjct: 457 LCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG-IQP 515

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +  TYT++I G CK  ++  A  ++  +   G      T+NV+I G  K G +  A  M+
Sbjct: 516 NKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMK 575

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +M   G +PD VTF  +I       + ++  KL  EM  K L
Sbjct: 576 SKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 111/243 (45%), Gaps = 3/243 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY+ +M   C +G +H++ Q+    ++++ + P+       ++   +    D A  LL +
Sbjct: 379 TYSTLMDGYCLVGEVHNAKQIFHAMVQTEVN-PSVCSYNIMINGLCKGKSVDEAMNLLRE 437

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +T  YNSL++ L K      A+ + KE        D  T+  L+ GL +   
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + KA   F  M   G  P+  TY  LI GLC+   +    +L + +  K     DV TY 
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG-CCIDVYTYN 556

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G CK G +D+A  + ++M   G  P AVTF ++I    +      AE +   M++ 
Sbjct: 557 VMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 616

Query: 397 GYL 399
           G L
Sbjct: 617 GLL 619



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 1/218 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           + V   +N S  +YN+++  LC+    D    +   M     +PN+      +    ++G
Sbjct: 402 AMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           +  +A  L+ +            Y SLL+ L K  N D+A+ +F +      QP+ +T+ 
Sbjct: 462 RITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 521

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI GL +   +K A + F  +   GC  D+ TYN +I GLC+   +     +  +++  
Sbjct: 522 ALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME-D 580

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           +   PD VT+  +I    +  + DKA  + +EM + G+
Sbjct: 581 NGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/140 (20%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P++  F  ++ +L K      A    KQ++   + P     + +I+ FC  G +  +  
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ ++ +   +P+ +  T L+ G C+KG + +++   +K++  G   + ++  +L++ L 
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248

Query: 554 KGGMPNEAFRIMQRASEDQN 573
           K G    A +++ R  ED++
Sbjct: 249 KIGETRCAIKLL-RMIEDRS 267


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 208/392 (53%), Gaps = 12/392 (3%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VF ++ + G  P      F +SS ++A + + +  +    R G V+   +++++ +NA  
Sbjct: 266 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFC 324

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K    ++A+ +F +  +L   P+  T+N LI GL + G + +AF F   M   G +  ++
Sbjct: 325 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLI 384

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ LI+GL ++ +    + +LKE   +  F+P+ V Y ++I GYCK+G +  A  I  +
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKET-LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 443

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S GI P++VT N +I GF K+G M  AE + E MLS G+  +   F+++I   C N +
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 503

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF---- 473
               L+   EM  +N+ PN    T L+  LCKE + +DA        W  L+ K F    
Sbjct: 504 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL-----WFRLLEKGFGANL 558

Query: 474 -MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
              N +I G CK GN+ EA  ++ +M E+    DK+T+  LI G C +G++ E   +  +
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           M++ G  PD  T N LI  + + G  +EA  +
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 212/422 (50%), Gaps = 17/422 (4%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  +N +  T N +++  C++G  +  + + + M S G   N       +       + 
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 504

Query: 208 DAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ---P 259
           ++A     + LL   RP +  ++T     L+  L K+    +AV +   +FRL  +    
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTT-----LVGGLCKEGKHSDAVEL---WFRLLEKGFGA 556

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +  T N LI GL + G +++A      M   G   D +TYNTLISG C+  +V  G +L 
Sbjct: 557 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLR 616

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+  K    PD  TY  +I G C++GK+D+A  ++NE  S  + P+  T+ V+IDG+ K
Sbjct: 617 GEM-VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK 675

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              +   E +   +L+     + V +++LI  YCRNG   +  KL D+M+ K + P   T
Sbjct: 676 ADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTAT 735

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ LI+ +C   R+ DA+  + +++   L+P    Y  +I G+CK G +D+   ++ EM 
Sbjct: 736 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 795

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
                P+K+T+T++I G+   G M  A  + ++M+  G  PD +T N L +   K G   
Sbjct: 796 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855

Query: 560 EA 561
           E 
Sbjct: 856 EG 857



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 206/438 (47%), Gaps = 36/438 (8%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++  + + C+ G + D++Q+ FD M   G  PN       +    + G  D A     + 
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFD-MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 374

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y+ L+N L+K    +EA  + KE       P+   +N LI G  ++G +
Sbjct: 375 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 434

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--------------- 322
             A     DM S G +P+ VT N++I G C++ ++ +   +L+E+               
Sbjct: 435 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 494

Query: 323 --------KFKSEFS-----------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                   +F+S              P+    T+++ G CK GK   A  ++  +   G 
Sbjct: 495 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 554

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
             + VT N LI G  K GNM  A  + ++ML  G++ D +T+++LI G C+ G++ +G K
Sbjct: 555 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 614

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM  + + P+ +T+ +LI+ +C+  +L++A     + K  DLVP  + Y  +IDG+C
Sbjct: 615 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 674

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           KA  ++E   +  E+  +  + + V +  LI  +C  G  VEA  + + M   G  P   
Sbjct: 675 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 734

Query: 544 TVNSLISCLLKGGMPNEA 561
           T +SLI  +   G   +A
Sbjct: 735 TYSSLIHGMCNIGRMEDA 752



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 172/333 (51%), Gaps = 3/333 (0%)

Query: 166 LCEMGLH-DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           LC+ G H D+V++ F  +   G   N       +    + G    A  LL +       +
Sbjct: 533 LCKEGKHSDAVELWFRLLEK-GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 591

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
               YN+L++   K+   +E   +  E  +   +PDT+T+N+LI G+ RIG++ +A   +
Sbjct: 592 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 651

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +  S    P++ TY  +I G C+ +++  G +L  E+        + V Y ++I  YC+
Sbjct: 652 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL-LTQNLELNSVVYNTLIRAYCR 710

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G   +A  ++++M S GI P+  T++ LI G   +G M  A+ + + M   G LP+VV 
Sbjct: 711 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 770

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LI GYC+ GQ+++ + +  EM   ++ PN  T+T++I+   K   +  A + L ++ 
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
              +VP    YN + +GFCK G ++E  ++  +
Sbjct: 831 GKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 217/464 (46%), Gaps = 40/464 (8%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSS 200
           L F    L ++ +  TYN ++  LC+ G  D      + M  DG   N+ +I +   ++ 
Sbjct: 335 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG--VNATLITYSVLING 392

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            ++  K + A  +L +      T +  +YN+L++   K  N  +A+ +  +       P+
Sbjct: 393 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 452

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
           + T N +IQG  +IG++++A     +M S G S +   + T+I  LC  +        L+
Sbjct: 453 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 512

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+  ++   P+    T+++ G CK GK   A  ++  +   G   + VT N LI G  K 
Sbjct: 513 EMLLRN-MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKT 571

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM------------ 428
           GNM  A  + ++ML  G++ D +T+++LI G C+ G++ +G KL  EM            
Sbjct: 572 GNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 631

Query: 429 -----------------------KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
                                  K ++L PNVYT+ ++I+  CK +++ +  +   +L  
Sbjct: 632 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 691

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
            +L     +YN +I  +C+ GN  EA  +  +M  K   P   T++ LI G C  GRM +
Sbjct: 692 QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 751

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           A  + ++M + G  P+ +   +LI    K G  ++   ++Q  S
Sbjct: 752 AKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 795



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 233/516 (45%), Gaps = 52/516 (10%)

Query: 90  SNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEV---IKRLDNPKLGLKFLEFS 146
           S++   +K V ++L   S  S  C + L   LSP     V   ++R  NPK  L F  F+
Sbjct: 111 SSDHALLKSVTSILSNPSLDSTQC-KQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFA 169

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
             +     + ++Y ++MRSL   G     +++   +  D  LP       F     R  +
Sbjct: 170 SDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRL-IDRKLP-----VLFGDPKNRHIE 223

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ-NNAD--EAVYMFKEYFRLYSQPDTWT 263
             +A   L++   GE  ++    + L++    Q  N     A+ +F+        P   T
Sbjct: 224 IASAMADLNEV--GESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKT 281

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
              L+  L +  E++K++  F  M   G SPD+  ++T I+  C+  +V    +L  +++
Sbjct: 282 CTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME 340

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K   SP+VVTY ++I G CK G +D+A     +M   G+  + +T++VLI+G  K+   
Sbjct: 341 -KLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 399

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT---- 439
             A  + +  L  G+ P+ V +++LIDGYC+ G L   L++  +M  K ++PN  T    
Sbjct: 400 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 459

Query: 440 -------------------------------FTILINALCKENRLNDARRFLKQLKWNDL 468
                                          FT +I+ LC  +R   A RFL+++   ++
Sbjct: 460 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P   +   ++ G CK G   +A  +   + EK    + VT   LI G C  G M EA+ 
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +  KML  G   D IT N+LIS   K G   E F++
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 615



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 145/275 (52%), Gaps = 1/275 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  +    +   M   G  P++      +    R GK D A  L ++ 
Sbjct: 595 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 654

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +  ++  + + Y  +++   K +  +E   +F E      + ++  +N LI+   R G  
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+   DM S G  P   TY++LI G+C +  +     L+ E++ K    P+VV YT+
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR-KEGLLPNVVCYTA 773

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCKLG+MDK   +  EM+S  I P+ +T+ V+IDG+ K G+M +A  +   M+  G
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 833

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
            +PD VT++ L +G+C+ G++ +G  L ++  G N
Sbjct: 834 IVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFN 868



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 39/173 (22%)

Query: 402 VVTFSSLIDGYC---RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           V     LI  YC   RN      + +   +  K + P V T T L+++L K N L     
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANEL----- 295

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
                                          E +  V E   +   PD   F+  I   C
Sbjct: 296 -------------------------------EKSYWVFETMRQGVSPDVYLFSTAINAFC 324

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             G++ +AI +F  M ++G +P+ +T N+LI  L K G  +EAFR  ++  +D
Sbjct: 325 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 377


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 201/407 (49%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G +   + V D M   G  P++      +  C R      A+ +  + 
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 489

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      +++L+  L K    D+A+  F++       PD   + ILI G  R G +
Sbjct: 490 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 549

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M   GC  D+VTYNT+++GLC+   ++   EL  E+  +  F PD  T+T+
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF-PDFYTFTT 608

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GY K G M+KA  ++  M    +KP  VT+N LIDGF K   M     +   M+S  
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +++  LI+GYC  G +++  +L DEM  K     + T   ++   C+      A 
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 728

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            FL  +    +VP    YN +I+GF K  N+D A  +V +ME     PD +T+ +++ G 
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             +GRM EA  I  KM+  G  PD  T  SLI+  +      EAFR+
Sbjct: 789 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 835



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 213/418 (50%), Gaps = 11/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ + C  GL +    + D M   G  P        ++   + GK   AKG+L + 
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++  T  YN LL    + +N  +A  +F E       PD  +F+ LI  LS+ G +
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 514

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A ++F DM + G +PD V Y  LI G CR   ++   ++  E+  +     DVVTY +
Sbjct: 515 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM-LEQGCXLDVVTYNT 573

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK   + +A  ++ EM   G+ P   TF  LI+G+ K GNM  A  + E M+   
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN 633

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+++LIDG+C+  ++ +  +L ++M  + + PN  ++ ILIN  C    +++A 
Sbjct: 634 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 693

Query: 458 RFLKQLKWNDLVPKPF-----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           R      W+++V K F       N ++ G+C+AGN  +A+  ++ M  K   PD +T+  
Sbjct: 694 RL-----WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G   +  M  A ++ NKM   G  PD IT N +++   + G   EA  IM +  E
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 806



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 241/495 (48%), Gaps = 64/495 (12%)

Query: 134 DNPKLGLKFLEFSRVNL-SLNHSFKTYN-----------------LVMRSLCEMGLHDSV 175
           +N +LG +F++    N  +  HS ++++                 +++R + + G+   V
Sbjct: 213 ENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGV-SRV 271

Query: 176 QVVFDYMRSDGHLPNSPMI-EFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMYN 230
           ++V   + + G+  ++P++ +  V + ++A K    C+A + L S+     + +S    N
Sbjct: 272 EIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK----GLCVSINACN 327

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           SLL  LVK    D A  +++E  R   Q + +T NI+I  L +  +++    F  DM   
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 387

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  PD+VTYNTLI+  CR   +    EL+  +  K    P V TY ++I+G CK GK  +
Sbjct: 388 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLR 446

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A G+ +EM   G+ P   T+N+L+    +  NM+ AE + + M S G +PD+V+FS+LI 
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 506

Query: 411 -----------------------------------GYCRNGQLNQGLKLCDEMKGKNLSP 435
                                              G+CRNG +++ LK+ DEM  +    
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +V T+  ++N LCKE  L++A     ++    + P  + +  +I+G+ K GN+++A  + 
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             M ++  KPD VT+  LI G C    M +   ++N M+     P+ I+   LI+     
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 686

Query: 556 GMPNEAFRIMQRASE 570
           G  +EAFR+     E
Sbjct: 687 GCVSEAFRLWDEMVE 701



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 203/415 (48%), Gaps = 11/415 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++ +LC+    ++ +     M   G  P+       +++  R G  + A  L+   
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 419

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YN+++N L K      A  +  E  ++   PDT T+NIL+    R   +
Sbjct: 420 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 479

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F +M S G  PD+V+++ LI  L +   + +  +  +++K  +  +PD V YT 
Sbjct: 480 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK-NAGLAPDNVIYTI 538

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+ G M +A  + +EM   G     VT+N +++G  K   +  A+ +   M   G
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  TF++LI+GY ++G +N+ + L + M  +NL P+V T+  LI+  CK + +    
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658

Query: 458 RFLKQLKWNDLV-----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
                  WND++     P    Y  +I+G+C  G V EA  +  EM EK  +   +T   
Sbjct: 659 EL-----WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++ G+C  G  V+A    + ML  G  PD IT N+LI+  +K    + AF ++ +
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 768


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 207/398 (52%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  +C  G       +   M       +       + S  R G  DAA  L  + 
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   YNSL+  L K    ++   + K+       P+  TFN+L+    + G++
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E + +M + G SP+I+TYNTL+ G C  N ++  + +L ++  +++ SPD+VT+TS
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVTFTS 373

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC + ++D    ++  ++  G+  +AVT+++L+ GF + G +  AE + + M+S G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV+T+  L+DG C NG+L + L++ ++++   +   +  +T +I  +CK  ++ DA 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    Y  +I G CK G++ EAN+++ +MEE    P+  T+  LI  H
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
              G +  +  +  +M   G + D  ++  +I  LL G
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 198/395 (50%), Gaps = 1/395 (0%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
            D    +F  M     LP+      F S+  R  + +       Q     +  + +  N 
Sbjct: 69  KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           ++N   +      A  +  +  +L  +PDT TFN LI+GL   G+V +A      M   G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C PD+VTYN++++G+CR  + +   +LL++++ +     DV TY+++I   C+ G +D A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++ EM + GIK S VT+N L+ G  K G       + + M+S   +P+V+TF+ L+D 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           + + G+L +  +L  EM  + +SPN+ T+  L++  C +NRL++A   L  +  N   P 
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +  +I G+C    VD+   +   + ++    + VT++IL+ G C  G++  A  +F 
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +M+  G  PD +T   L+  L   G   +A  I +
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 218/444 (49%), Gaps = 2/444 (0%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           I R     L L F +   +N  + H+  T N+++   C          V   +   G+ P
Sbjct: 98  IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++      +      GK   A  L+ +            YNS++N + +  +   A+ + 
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           ++      + D +T++ +I  L R G +  A   F +M + G    +VTYN+L+ GLC+ 
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            +   G  LLK++    E  P+V+T+  ++  + K GK+ +A  +Y EM + GI P+ +T
Sbjct: 277 GKWNDGALLLKDM-VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N L+DG+     +  A  M + M+     PD+VTF+SLI GYC   +++ G+K+   + 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            + L  N  T++IL+   C+  ++  A    +++  + ++P    Y  ++DG C  G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  I  ++++ +     V +T +I G C  G++ +A ++F  +   G  P+ +T   +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 550 SCLLKGGMPNEAFRIMQRASEDQN 573
           S L K G  +EA  ++++  ED N
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGN 539



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 204/410 (49%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +++ L   G      V+ D M  +G  P+       V+   R+G    A  LL + 
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F Y++++++L +    D A+ +FKE      +    T+N L++GL + G+ 
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                   DM S    P+++T+N L+    +  ++   +EL KE+  +   SP+++TY +
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNT 338

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC   ++ +A  + + M      P  VTF  LI G+  V  +     +   +   G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + VT+S L+ G+C++G++    +L  EM    + P+V T+ IL++ LC   +L  A 
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + L+ + +     MY  +I+G CK G V++A  +   +  K  KP+ +T+T++I G 
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C KG + EA  +  KM   G AP+D T N+LI   L+ G    + ++++ 
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 79/152 (51%)

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           +  + L  EM      P++  F+   +A+ +  + N    F KQL+ N +    +  N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I+ FC+      A  ++ ++ +   +PD  TF  LI G  ++G++ EA+ + ++M+  GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            PD +T NS+++ + + G  + A  ++++  E
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 201/407 (49%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G +   + V D M   G  P++      +  C R      A+ +  + 
Sbjct: 326 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      +++L+  L K    D+A+  F++       PD   + ILI G  R G +
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M   GC  D+VTYNT+++GLC+   ++   EL  E+  +  F PD  T+T+
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF-PDFYTFTT 504

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GY K G M+KA  ++  M    +KP  VT+N LIDGF K   M     +   M+S  
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 564

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +++  LI+GYC  G +++  +L DEM  K     + T   ++   C+      A 
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 624

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            FL  +    +VP    YN +I+GF K  N+D A  +V +ME     PD +T+ +++ G 
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 684

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             +GRM EA  I  KM+  G  PD  T  SLI+  +      EAFR+
Sbjct: 685 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 731



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 253/494 (51%), Gaps = 52/494 (10%)

Query: 105 RSSYLSDTCARYLCEKL------SPLNSLE-VIKRLD-------------NPKLGLKFLE 144
           +S+ LSD+   +L EK+        LNSL  ++ RLD             N +LG +F++
Sbjct: 63  QSTSLSDS---FLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFID 119

Query: 145 FSRVNL-SLNHSFKTYN-----------------LVMRSLCEMGLHDSVQVVFDYMRSDG 186
               N  +  HS ++++                 +++R + + G+   V++V   + + G
Sbjct: 120 SITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVS-RVEIVESLVLTYG 178

Query: 187 HLPNSPMI-EFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           +  ++P++ +  V + ++A K    C+A + L S+     + +S    NSLL  LVK   
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK----GLCVSINACNSLLGGLVKVGW 234

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            D A  +++E  R   Q + +T NI+I  L +  +++    F  DM   G  PD+VTYNT
Sbjct: 235 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 294

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI+  CR   +    EL+  +  K    P V TY ++I+G CK GK  +A G+ +EM   
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 353

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+ P   T+N+L+    +  NM+ AE + + M S G +PD+V+FS+LI    +NG L+Q 
Sbjct: 354 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 413

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           LK   +MK   L+P+   +TILI   C+   +++A +   ++     V     YN +++G
Sbjct: 414 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 473

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK   + EA+ +  EM E+   PD  TFT LI G+   G M +A+++F  M++    PD
Sbjct: 474 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 533

Query: 542 DITVNSLISCLLKG 555
            +T N+LI    KG
Sbjct: 534 VVTYNTLIDGFCKG 547



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 213/418 (50%), Gaps = 11/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ + C  GL +    + D M   G  P        ++   + GK   AKG+L + 
Sbjct: 291 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++  T  YN LL    + +N  +A  +F E       PD  +F+ LI  LS+ G +
Sbjct: 351 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 410

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A ++F DM + G +PD V Y  LI G CR   ++   ++  E+  +     DVVTY +
Sbjct: 411 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM-LEQGCVLDVVTYNT 469

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK   + +A  ++ EM   G+ P   TF  LI+G+ K GNM  A  + E M+   
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 529

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+++LIDG+C+  ++ +  +L ++M  + + PN  ++ ILIN  C    +++A 
Sbjct: 530 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 589

Query: 458 RFLKQLKWNDLVPKPF-----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           R      W+++V K F       N ++ G+C+AGN  +A+  ++ M  K   PD +T+  
Sbjct: 590 RL-----WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G   +  M  A ++ NKM   G  PD IT N +++   + G   EA  IM +  E
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 702



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 203/415 (48%), Gaps = 11/415 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++ +LC+    ++ +     M   G  P+       +++  R G  + A  L+   
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 315

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YN+++N L K      A  +  E  ++   PDT T+NIL+    R   +
Sbjct: 316 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 375

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F +M S G  PD+V+++ LI  L +   + +  +  +++K  +  +PD V YT 
Sbjct: 376 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK-NAGLAPDNVIYTI 434

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+ G M +A  + +EM   G     VT+N +++G  K   +  A+ +   M   G
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  TF++LI+GY ++G +N+ + L + M  +NL P+V T+  LI+  CK + +    
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554

Query: 458 RFLKQLKWNDLV-----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
                  WND++     P    Y  +I+G+C  G V EA  +  EM EK  +   +T   
Sbjct: 555 EL-----WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++ G+C  G  V+A    + ML  G  PD IT N+LI+  +K    + AF ++ +
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 664



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 57/138 (41%)

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
           N   N   F +L+    +  +L +     + LK   L       N ++ G  K G VD A
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             I  E+     + +  T  I+I   C   ++    S  + M   G  PD +T N+LI+ 
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298

Query: 552 LLKGGMPNEAFRIMQRAS 569
             + G+  EAF +M   S
Sbjct: 299 YCRQGLLEEAFELMDSMS 316


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 210/419 (50%), Gaps = 2/419 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++  +  LC+ G  D    V   M  +G  P+       ++     G+ + AKG+++Q 
Sbjct: 303 TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQM 362

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T  +N+L+ AL  +N  +EA+ + +E       P+ +TFNILI  L ++G+ 
Sbjct: 363 VDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDP 422

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F +M S GC+PD VTYN LI  LC   ++A+  +LLKE++  S      VTY +
Sbjct: 423 HLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEV-SGCPQSTVTYNT 481

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  ++++A  ++++M+  GI  +A+TFN LIDG      +  A  + ++M+S G
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG 541

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VT++S++  YC+ G +++   +   M       +V T+  LIN LCK  R   A 
Sbjct: 542 LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L+ ++   + P P  YNPVI    +  N  +A  +  EM E    PD  T+ I+  G 
Sbjct: 602 KLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGL 661

Query: 518 CMKGRMV-EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           C  G  + EA     +M   G  P+  +   L   LL  GM +   R ++   E  N +
Sbjct: 662 CRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKANFR 720



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 220/476 (46%), Gaps = 38/476 (7%)

Query: 129 VIKRLDNPKLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
            ++   +P+  L+ L  +   +  L  S   Y  ++R L   G  D ++V+   MR +GH
Sbjct: 62  ALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGH 121

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLS-QFRPGEVTMSTFMYNSLL------------- 233
                +++ F+ S  R    D A  L+S Q     V  +T +YN LL             
Sbjct: 122 EVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLE 181

Query: 234 ----------------------NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
                                 +AL +   A  AV M +E       PD  TF  L++G 
Sbjct: 182 SAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGF 241

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              G ++ A      M   GCSP  VT N LI+G C++  V      +++ +    F PD
Sbjct: 242 VEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQ-EIADGFEPD 300

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VT+++ ++G C+ G +D A  +   M   G +P   T++ +I+     G +  A+ +  
Sbjct: 301 RVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVN 360

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M+  G LPD  TF++LI   C   QL + L L  E+  K LSPNVYTF ILINALCK  
Sbjct: 361 QMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVG 420

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
             + A R  +++K +   P    YN +ID  C +G + +A  ++ EME   C    VT+ 
Sbjct: 421 DPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYN 480

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +I G C + R+ EA  +F++M   G   + IT N+LI  L      ++A  ++ +
Sbjct: 481 TIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 195/418 (46%), Gaps = 11/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T+  +M    E G  ++   +   M   G  P S  +   ++   + G+   A G + Q 
Sbjct: 233 TFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQE 292

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P  VT STF     +N L +  + D A+ +     +   +PD +T++ +I  L 
Sbjct: 293 IADGFEPDRVTFSTF-----VNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLC 347

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
             GE+++A      M   GC PD  T+NTLI  LC  N++    +L +E+  K   SP+V
Sbjct: 348 NNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG-LSPNV 406

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +I+  CK+G    A  ++ EM S G  P  VT+N+LID     G +  A  + + 
Sbjct: 407 YTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKE 466

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G     VT++++IDG C+  ++ +  ++ D+M    +  N  TF  LI+ LC   R
Sbjct: 467 MEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER 526

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA   + Q+    L P    YN ++  +CK GN+ +A  I+  M     + D VT+  
Sbjct: 527 IDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYAT 586

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G C   R   A+ +   M   G  P     N +I  L +G    +A  + +  +E
Sbjct: 587 LINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 204/430 (47%), Gaps = 4/430 (0%)

Query: 140 LKFLEFSRVNLS---LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           +K LE +   +S   +     T+N V+ +LC      +  ++ + M S    P+      
Sbjct: 177 IKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +   +  G  +AA  L ++      + ++   N L+N   K     +A+   ++     
Sbjct: 237 LMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADG 296

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            +PD  TF+  + GL + G V  A +    M   GC PD+ TY+T+I+ LC   E+    
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAK 356

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            ++ ++   S   PD  T+ ++I   C   ++++A  +  E+   G+ P+  TFN+LI+ 
Sbjct: 357 GIVNQM-VDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             KVG+   A  + E M S G  PD VT++ LID  C +G+L + L L  EM+      +
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T+  +I+ LCK  R+ +A     Q+    +      +N +IDG C A  +D+A  +V 
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +M  +  +P+ VT+  ++  +C +G + +A  I   M   G   D +T  +LI+ L K  
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKAR 595

Query: 557 MPNEAFRIMQ 566
               A ++++
Sbjct: 596 RTQAALKLLR 605



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 1/211 (0%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+ PS   +  +I   G  G     + +   M   G+   +    S I  Y R    +  
Sbjct: 85  GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144

Query: 422 LKLC-DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             L  +++    +  N   +  L+  L + +++        ++    + P    +N VID
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVID 204

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             C+A     A +++ EM      PD+ TFT L+ G   +G +  A+ +  +M  +GC+P
Sbjct: 205 ALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSP 264

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +TVN LI+   K G   +A   +Q+   D
Sbjct: 265 TSVTVNVLINGYCKLGRVGDALGYIQQEIAD 295


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 216/431 (50%), Gaps = 5/431 (1%)

Query: 140 LKFLEFSRVNL---SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           LK +E +  N+    +     T+N+++++LC         ++ + M   G LP+      
Sbjct: 176 LKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTT 235

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY-FRL 255
            +   I  G  D A  +  Q       ++    N L+N   K+   +EA+   +E   R 
Sbjct: 236 IMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLRE 295

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              PD +TFN+L+ GLS+ G VK A E    M   G  PDI TYN+LISGLC++ EV   
Sbjct: 296 GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEA 355

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            ++L ++  + + SP+ VTY ++IS  CK  ++++AT +   +   GI P   T+N LI 
Sbjct: 356 VKVLNQM-IERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQ 414

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G     N   A  + + M + G  PD  T++ LID  C  G+L + L L  EM+    + 
Sbjct: 415 GLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCAR 474

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV T+  LI+  CK  R+ +A     Q++   +      YN +IDG CK+  V+EA+ ++
Sbjct: 475 NVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLM 534

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M  +  +PDK T+  L+   C  G + +A  I   M   GC PD +T  +LI+ L K 
Sbjct: 535 DQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKA 594

Query: 556 GMPNEAFRIMQ 566
           G    A ++++
Sbjct: 595 GRVEAATKLLR 605



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 202/408 (49%), Gaps = 10/408 (2%)

Query: 139 GLKFLEFSRVNLSLNHSF----KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
            L+F+E     +SL   F     T+N+++  L + G       V D M  +G  P+    
Sbjct: 284 ALRFIE----EMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTY 339

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              +S   + G+ D A  +L+Q    + + +T  YN++++ L K+N  +EA  +      
Sbjct: 340 NSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTG 399

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PD  T+N LIQGL        A E + +M + GC PD  TYN LI  LC   ++  
Sbjct: 400 KGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQE 459

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              LLKE++  S  + +V+TY ++I G+CK  ++ +A  I+++M   G+  ++VT+N LI
Sbjct: 460 ALNLLKEMEV-SGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           DG  K   +  A  + ++M+  G  PD  T++SL+  +C+ G + +   +   M      
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T+  LI  LCK  R+  A + L+ ++   +   P  YNPVI    +     EA  +
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMV-EAISIFNKMLRIGCAPD 541
             EM EK   PD VT+ I+  G C  G  + EA+    +ML  G  P+
Sbjct: 639 FREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPE 686



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 213/438 (48%), Gaps = 12/438 (2%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           L+F++   V   +  +   YN ++  L +      V++    M S G  P+       + 
Sbjct: 144 LQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIK 203

Query: 200 SCIRAGKCDAAKGLLSQFR-----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           +  RA +   A  L+ +       P E T +T M        +++ N D A+ + ++   
Sbjct: 204 ALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIM-----QGFIEEGNLDGAMRVKEQMVE 258

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVA 313
                   T N+L+ G  + G +++A  F  +M    G  PD  T+N L++GL +   V 
Sbjct: 259 AGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVK 318

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              E++ ++  +  F PD+ TY S+ISG CKLG++D+A  + N+M      P+ VT+N +
Sbjct: 319 HALEVM-DMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI 377

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I    K   +  A  +   +   G LPDV T++SLI G C +      ++L  EMK K  
Sbjct: 378 ISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGC 437

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+ +T+ +LI++LC   +L +A   LK+++ +        YN +IDGFCK   + EA  
Sbjct: 438 HPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEE 497

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           I  +ME +    + VT+  LI G C   R+ EA  + ++M+  G  PD  T NSL++   
Sbjct: 498 IFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFC 557

Query: 554 KGGMPNEAFRIMQRASED 571
           K G   +A  I+Q  + D
Sbjct: 558 KAGDIKKAADIVQTMASD 575


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 213/417 (51%), Gaps = 3/417 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGL 213
           S  TYN+++ S C  G       +F  M+ +  + P+       +S    +G  + A+ L
Sbjct: 44  SLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKL 103

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           LS+ R   +  + F Y+S++ +LVK+   +E+  + +E       PD + FN ++QG +R
Sbjct: 104 LSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFAR 163

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-FSPDV 332
              ++KA E +  M   G  PD V+Y+ LI GL ++ ++    ++L E+  ++  + P+V
Sbjct: 164 SNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNV 223

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +T++++I G C+ G+++KA  ++  M   G KP+  T+  LI G  +   ++ A  + E+
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG-KNLSPNVYTFTILINALCKEN 451
           M      PD V ++SLI GYC+ G +++  KL  EM G   L P + TF  LI+  CK  
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +L  A   + ++    L      Y  +I G  +A  +DEA  +  +M EK+   D V+  
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
             + G C  G + +A ++F    + G  P+  T   L   L+K G   +A ++M+ A
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 460



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 195/387 (50%), Gaps = 5/387 (1%)

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           +F V S  +AG    A  +    +      S   YN L+N+        +A+ +F+   R
Sbjct: 14  DFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKR 73

Query: 255 LYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
               +PD WT+N LI GL   G  + A +   +M     + ++ TY+++I  L +  +  
Sbjct: 74  EKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPE 133

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
             +++L+E+   +  +PDV  +  V+ G+ +   M+KA  +Y  M   G KP  V++++L
Sbjct: 134 ESYKVLEEM-MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 374 IDGFGKVGNM-VSAEYMRE-RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           I G  K+G +  S + + E  M + GY+P+V+TFS+LI G CR G+L + L++   M   
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              PN YT+T LI  LC+  ++  AR   +++    + P    YN +I G+CK G++DEA
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 492 NVIVAEMEEKR-CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             +  EM      +P  VTF  LI G C  G++  A  +  +M   G A D  T   LI+
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIA 372

Query: 551 CLLKGGMPNEAFRIMQRASEDQNLQLP 577
            L +    +EA  + ++  E + L  P
Sbjct: 373 GLSRATKLDEALEVYKQMREKKFLLDP 399



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 161/315 (51%), Gaps = 2/315 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            ++ ++Q L++ G + +A E F  M S  C P +VTYN LI+  C   E  +  +L + +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           K +    PD  TY ++ISG C  G  + A  + +EM    I  +  T++ +I    K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
              +  + E M++ G  PDV  F+ ++ G+ R+  + +  ++   M      P+  ++ I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 443 LINALCKENRLNDARRFLKQ--LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           LI+ L K  +L+++ + L +  ++    VP    ++ +I G C+ G +++A  +   M E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
             CKP+K T+T LI G C   ++++A  +F KM +    PD +  NSLI+   K G  +E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 561 AFRIMQRASEDQNLQ 575
           A ++ +  S    LQ
Sbjct: 312 AEKLYREMSGGAGLQ 326



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 154/316 (48%), Gaps = 2/316 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +N VM+        +  + V+ +M   G+ P++      +    + GK D +  +LS+ 
Sbjct: 153 AFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM 212

Query: 218 --RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             R      +   +++L++ L +    ++A+ +F        +P+ +T+  LI GL R  
Sbjct: 213 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAE 272

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +V +A E F  M      PD V YN+LI+G C+   +    +L +E+   +   P +VT+
Sbjct: 273 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 332

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I G+CKLGK+ +A  +  EM + G+     T+ +LI G  +   +  A  + ++M  
Sbjct: 333 NTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMRE 392

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
             +L D V+  S + G C+ G ++Q   + +  +     PN  TF IL  +L K  R+ D
Sbjct: 393 KKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 452

Query: 456 ARRFLKQLKWNDLVPK 471
           A++ ++  K  D+  +
Sbjct: 453 AQKLMEPAKARDITAQ 468


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 206/396 (52%), Gaps = 1/396 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  +C  G       +   M       +       + S  R G  DAA  L  + 
Sbjct: 185 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 244

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   YNSL+  L K    ++   + K+       P+  TFN+L+    + G++
Sbjct: 245 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 304

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E + +M + G SP+I+TYNTL+ G C  N ++  + +L ++  +++ SPD+VT+TS
Sbjct: 305 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVTFTS 363

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC + ++D    ++  ++  G+  +AVT+++L+ GF + G +  AE + + M+S G
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV+T+  L+DG C NG+L + L++ ++++   +   +  +T +I  +CK  ++ DA 
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    Y  +I G CK G++ EAN+++ +MEE    P+  T+  LI  H
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
              G +  +  +  +M   G + D  ++  +I  LL
Sbjct: 544 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 579



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 199/394 (50%), Gaps = 1/394 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D    +F  M     LP+      F S+  R  + +       Q     +  + +  N +
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           +N   +      A  +  +  +L  +PDT TFN LI+GL   G+V +A      M   GC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PD+VTYN++++G+CR  + +   +LL++++ ++    DV TY+++I   C+ G +D A 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN-VKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ EM + GIK S VT+N L+ G  K G       + + M+S   +P+V+TF+ L+D +
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            + G+L +  +L  EM  + +SPN+ T+  L++  C +NRL++A   L  +  N   P  
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             +  +I G+C    VD+   +   + ++    + VT++IL+ G C  G++  A  +F +
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           M+  G  PD +T   L+  L   G   +A  I +
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 452



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 218/444 (49%), Gaps = 2/444 (0%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           I R     L L F +   +N  + H+  T N+++   C          V   +   G+ P
Sbjct: 88  IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 146

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++      +      GK   A  L+ +            YNS++N + +  +   A+ + 
Sbjct: 147 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 206

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           ++      + D +T++ +I  L R G +  A   F +M + G    +VTYN+L+ GLC+ 
Sbjct: 207 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 266

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            +   G  LLK++    E  P+V+T+  ++  + K GK+ +A  +Y EM + GI P+ +T
Sbjct: 267 GKWNDGALLLKDM-VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 325

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N L+DG+     +  A  M + M+     PD+VTF+SLI GYC   +++ G+K+   + 
Sbjct: 326 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 385

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            + L  N  T++IL+   C+  ++  A    +++  + ++P    Y  ++DG C  G ++
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 445

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  I  ++++ +     V +T +I G C  G++ +A ++F  +   G  P+ +T   +I
Sbjct: 446 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 505

Query: 550 SCLLKGGMPNEAFRIMQRASEDQN 573
           S L K G  +EA  ++++  ED N
Sbjct: 506 SGLCKKGSLSEANILLRKMEEDGN 529



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 199/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +++ L   G      V+ D M  +G  P+       V+   R+G    A  LL + 
Sbjct: 150 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 209

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F Y++++++L +    D A+ +FKE      +    T+N L++GL + G+ 
Sbjct: 210 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 269

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                   DM S    P+++T+N L+    +  ++   +EL KE+  +   SP+++TY +
Sbjct: 270 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNT 328

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC   ++ +A  + + M      P  VTF  LI G+  V  +     +   +   G
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 388

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + VT+S L+ G+C++G++    +L  EM    + P+V T+ IL++ LC   +L  A 
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 448

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + L+ + +     MY  +I+G CK G V++A  +   +  K  KP+ +T+T++I G 
Sbjct: 449 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 508

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C KG + EA  +  KM   G AP+D T N+LI   L+ G
Sbjct: 509 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 547



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 79/152 (51%)

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           +  + L  EM      P++  F+   +A+ +  + N    F KQL+ N +    +  N +
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I+ FC+      A  ++ ++ +   +PD  TF  LI G  ++G++ EA+ + ++M+  GC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            PD +T NS+++ + + G  + A  ++++  E
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 211



 Score = 46.2 bits (108), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%)

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
           G+   +V+AE + + M+  G  P+ +T+SSLIDG+C+  +L++  ++ D M  K  S   
Sbjct: 710 GRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIR 769

Query: 438 YTFTILI 444
           Y    L+
Sbjct: 770 YLLAGLM 776


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 208/392 (53%), Gaps = 12/392 (3%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VF ++ + G  P      F +SS ++A + + +  +    R G V+   +++++ +NA  
Sbjct: 199 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFC 257

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K    ++A+ +F +  +L   P+  T+N LI GL + G + +AF F   M   G +  ++
Sbjct: 258 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLI 317

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ LI+GL ++ +    + +LKE   +  F+P+ V Y ++I GYCK+G +  A  I  +
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKET-LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 376

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S GI P++VT N +I GF K+G M  AE + E MLS G+  +   F+++I   C N +
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF---- 473
               L+   EM  +N+ PN    T L+  LCKE + +DA        W  L+ K F    
Sbjct: 437 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL-----WFRLLEKGFGANL 491

Query: 474 -MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
              N +I G CK GN+ EA  ++ +M E+    DK+T+  LI G C +G++ E   +  +
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           M++ G  PD  T N LI  + + G  +EA  +
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 218/432 (50%), Gaps = 17/432 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  +N +  T N +++  C++G  +  + + + M S G   N       +       + 
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 437

Query: 208 DAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ---P 259
           ++A     + LL   RP +  ++T     L+  L K+    +AV +   +FRL  +    
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTT-----LVGGLCKEGKHSDAVEL---WFRLLEKGFGA 489

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +  T N LI GL + G +++A      M   G   D +TYNTLISG C+  +V  G +L 
Sbjct: 490 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLR 549

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+  K    PD  TY  +I G C++GK+D+A  ++NE  S  + P+  T+ V+IDG+ K
Sbjct: 550 GEM-VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK 608

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              +   E +   +L+     + V +++LI  YCRNG   +  KL D+M+ K + P   T
Sbjct: 609 ADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTAT 668

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ LI+ +C   R+ DA+  + +++   L+P    Y  +I G+CK G +D+   ++ EM 
Sbjct: 669 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 728

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
                P+K+T+T++I G+   G M  A  + ++M+  G  PD +T N L +   K G   
Sbjct: 729 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 788

Query: 560 EAFRIMQRASED 571
           E F+I    S++
Sbjct: 789 EGFKICDYMSQE 800



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 194/389 (49%), Gaps = 6/389 (1%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           L M S  E  L    +++   MR     PN  ++   V    + GK   A  L  +    
Sbjct: 431 LCMNSRFESALRFLREMLLRNMR-----PNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 485

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
               +    N+L++ L K  N  EAV + K+        D  T+N LI G  + G+V++ 
Sbjct: 486 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 545

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
           F+   +M   G  PD  TYN LI G+CR+ ++     L  E K + +  P+V TY  +I 
Sbjct: 546 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR-DLVPNVYTYGVMID 604

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           GYCK  K+++   ++ E+ +  ++ ++V +N LI  + + GN V A  + + M S G  P
Sbjct: 605 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 664

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
              T+SSLI G C  G++     L DEM+ + L PNV  +T LI   CK  +++     L
Sbjct: 665 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 724

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           +++   D+ P    Y  +IDG+ K+G++  A  ++ EM  K   PD VT+ +L  G C +
Sbjct: 725 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 784

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           G++ E   I + M + G   D+IT  +L+
Sbjct: 785 GKIEEGFKICDYMSQEGLPLDEITYTTLV 813



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 182/352 (51%), Gaps = 3/352 (0%)

Query: 166 LCEMGLH-DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           LC+ G H D+V++ F  +   G   N       +    + G    A  LL +       +
Sbjct: 466 LCKEGKHSDAVELWFRLLEK-GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 524

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
               YN+L++   K+   +E   +  E  +   +PDT+T+N+LI G+ RIG++ +A   +
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +  S    P++ TY  +I G C+ +++  G +L  E+        + V Y ++I  YC+
Sbjct: 585 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL-LTQNLELNSVVYNTLIRAYCR 643

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G   +A  ++++M S GI P+  T++ LI G   +G M  A+ + + M   G LP+VV 
Sbjct: 644 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LI GYC+ GQ+++ + +  EM   ++ PN  T+T++I+   K   +  A + L ++ 
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              +VP    YN + +GFCK G ++E   I   M ++    D++T+T L+ G
Sbjct: 764 GKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 211/421 (50%), Gaps = 5/421 (1%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSS 200
           L F    L ++ +  TYN ++  LC+ G  D      + M  DG   N+ +I +   ++ 
Sbjct: 268 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG--VNATLITYSVLING 325

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            ++  K + A  +L +      T +  +YN+L++   K  N  +A+ +  +       P+
Sbjct: 326 LMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPN 385

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
           + T N +IQG  +IG++++A     +M S G S +   + T+I  LC  +        L+
Sbjct: 386 SVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLR 445

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+  ++   P+    T+++ G CK GK   A  ++  +   G   + VT N LI G  K 
Sbjct: 446 EMLLRN-MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKT 504

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           GNM  A  + ++ML  G++ D +T+++LI G C+ G++ +G KL  EM  + + P+ +T+
Sbjct: 505 GNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 564

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            +LI+ +C+  +L++A     + K  DLVP  + Y  +IDG+CKA  ++E   +  E+  
Sbjct: 565 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 624

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  + + V +  LI  +C  G  VEA  + + M   G  P   T +SLI  +   G   +
Sbjct: 625 QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 684

Query: 561 A 561
           A
Sbjct: 685 A 685



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 233/516 (45%), Gaps = 52/516 (10%)

Query: 90  SNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEV---IKRLDNPKLGLKFLEFS 146
           S++   +K V ++L   S  S  C + L   LSP     V   ++R  NPK  L F  F+
Sbjct: 44  SSDHALLKSVTSILSNPSLDSTQC-KQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFA 102

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
             +     + ++Y ++MRSL   G     +++   +  D  LP       F     R  +
Sbjct: 103 SDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRL-IDRKLP-----VLFGDPKNRHIE 156

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ-NNAD--EAVYMFKEYFRLYSQPDTWT 263
             +A   L++   GE  ++    + L++    Q  N     A+ +F+        P   T
Sbjct: 157 IASAMADLNEV--GESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKT 214

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
              L+  L +  E++K++  F  M   G SPD+  ++T I+  C+  +V    +L  +++
Sbjct: 215 CTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME 273

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K   SP+VVTY ++I G CK G +D+A     +M   G+  + +T++VLI+G  K+   
Sbjct: 274 -KLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 332

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT---- 439
             A  + +  L  G+ P+ V +++LIDGYC+ G L   L++  +M  K ++PN  T    
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 392

Query: 440 -------------------------------FTILINALCKENRLNDARRFLKQLKWNDL 468
                                          FT +I+ LC  +R   A RFL+++   ++
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P   +   ++ G CK G   +A  +   + EK    + VT   LI G C  G M EA+ 
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +  KML  G   D IT N+LIS   K G   E F++
Sbjct: 513 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKL 548



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 154/325 (47%), Gaps = 1/325 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N ++  LC+ G       +   M   G + +       +S C + GK +    L  + 
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +   TF YN L++ + +    DEAV ++ E       P+ +T+ ++I G  +  ++
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++  + F ++ +     + V YNTLI   CR        +L  +++ K    P   TY+S
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG-IPPTTATYSS 671

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C +G+M+ A  + +EM   G+ P+ V +  LI G+ K+G M     + + M S+ 
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +T++ +IDGY ++G +    KL  EM GK + P+  T+ +L N  CKE ++ +  
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGF 482
           +    +    L      Y  ++ G+
Sbjct: 792 KICDYMSQEGLPLDEITYTTLVHGW 816



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 34/264 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++  +C +G  D    +++  +S   +PN       +    +A K +  + L ++ 
Sbjct: 563 TYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL 622

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +++ +YN+L+ A  +  N  EA  +  +       P T T++ LI G+  IG +
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--------------- 322
           + A     +M   G  P++V Y  LI G C++ ++ +   +L+E+               
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742

Query: 323 --------------KFKSE-----FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                         K   E       PD VTY  + +G+CK GK+++   I + M+  G+
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAE 387
               +T+  L+ G+ +   + + E
Sbjct: 803 PLDEITYTTLVHGWQQPSALTNQE 826



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 39/173 (22%)

Query: 402 VVTFSSLIDGYC---RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           V     LI  YC   RN      + +   +  K + P V T T L+++L K N L     
Sbjct: 174 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANEL----- 228

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
                                          E +  V E   +   PD   F+  I   C
Sbjct: 229 -------------------------------EKSYWVFETMRQGVSPDVYLFSTAINAFC 257

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             G++ +AI +F  M ++G +P+ +T N+LI  L K G  +EAFR  ++  +D
Sbjct: 258 KGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 310


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 213/435 (48%), Gaps = 36/435 (8%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           +D+V  +   M   G  PN+  +   ++        D    +L++     +  +   + +
Sbjct: 107 YDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTT 166

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+N L K     +A+ +F +      QPD +T+  +I GL ++GE   A      MG  G
Sbjct: 167 LINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVG 226

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C PD+VTY+TLI  LC+   V    ++   +K K   SP VV+YTS+I G C   +  +A
Sbjct: 227 CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKG-ISPTVVSYTSLIQGLCSFSRWKEA 285

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL--- 408
           + + NEM S  I P  VTF++LID F K GN++ A+ + + M   G  P+V+T++SL   
Sbjct: 286 SAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHG 345

Query: 409 --------------------------------IDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
                                           I+GYC   ++++  +L +EM  + L+PN
Sbjct: 346 YSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             ++T LI+A C+  +L +AR   K +  N  +P    Y+ +++GFCK G + +A  +  
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFR 465

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M+    KP+ V +TILI   C  G +  A  +F+++   G  PD     ++I+ L K G
Sbjct: 466 AMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEG 525

Query: 557 MPNEAFRIMQRASED 571
           + +EA    ++  ED
Sbjct: 526 LLDEALEAFRKMEED 540



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 195/387 (50%), Gaps = 1/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+MG   +   +   M   G  P+       + S  +    + A  + S  
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYM 257

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   ++ +   Y SL+  L   +   EA  M  E   L   PD  TF++LI    + G V
Sbjct: 258 KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G  P+++TYN+L+ G     EV    +L  +V       PDV +Y+ 
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF-DVMITRGCKPDVFSYSI 376

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC + ++D+A  ++NEM   G+ P+ V++  LI  F ++G +  A  + + M + G
Sbjct: 377 LINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNG 436

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           YLPD+ T+S L++G+C+ G L +  +L   M+G  L PN+  +TILI+++CK   LN AR
Sbjct: 437 YLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHAR 496

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   +L  + L P   +Y  +I+G CK G +DEA     +MEE  C P++ ++ ++I G 
Sbjct: 497 KLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGF 556

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDIT 544
                   A+ +  +M   G   D+ T
Sbjct: 557 LQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 131/256 (51%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P I+ +N L+S + R+ +       L +    +  SP+  T   +I+ +C +  +D    
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +  ++   G++P+ +TF  LI+G  K G    A  + + M++ G  PDV T++++I+G C
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G+      L  +M      P+V T++ LI++LCK+  +N+A      +K   + P   
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            Y  +I G C      EA+ ++ EM      PD VTF++LI   C +G ++EA  +   M
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327

Query: 534 LRIGCAPDDITVNSLI 549
             +G  P+ IT NSL+
Sbjct: 328 TEMGVEPNVITYNSLM 343



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 3/207 (1%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY-MRERMLSFGYLPDVVTFS 406
           +D A   +N M      P  + FN L+    ++     A   + ++M   G  P+  T +
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LI+ +C    ++ G  +  ++    L P + TFT LIN LCK      A      +   
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV-E 525
              P  + Y  +I+G CK G    A  ++ +M E  C+PD VT++ LI   C K R+V E
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC-KDRLVNE 249

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCL 552
           A+ IF+ M   G +P  ++  SLI  L
Sbjct: 250 ALDIFSYMKAKGISPTVVSYTSLIQGL 276



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 4/202 (1%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +N   ++KR+D  K     L    ++  L  +  +Y  ++ + C++G     + +F  M 
Sbjct: 378 INGYCMVKRIDEAKQ----LFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH 433

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           ++G+LP+       +    + G    A  L    +   +  +  MY  L++++ K  N +
Sbjct: 434 TNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLN 493

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A  +F E F    QPD   +  +I GL + G + +A E F  M   GC P+  +YN +I
Sbjct: 494 HARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVII 553

Query: 304 SGLCRVNEVARGHELLKEVKFK 325
            G  +  + +R  +L+ E++ K
Sbjct: 554 RGFLQHKDESRAVQLIGEMRDK 575



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 1/137 (0%)

Query: 435 PNVYTFTILINALCKENRLNDARRFL-KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           P +  F  L++A+ +  +  DA   L KQ++   L P     N +I+ FC   +VD    
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++A++ +   +P  +TFT LI G C  G   +A+ +F+ M+  GC PD  T  ++I+ L 
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 554 KGGMPNEAFRIMQRASE 570
           K G    A  ++++  E
Sbjct: 208 KMGETAAAAGLIKKMGE 224


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 213/404 (52%), Gaps = 6/404 (1%)

Query: 174 SVQVVFDYMRSDGHLPNSP--MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           +V  VF  +  DG  P +   +I+  V + ++  +   A    ++ +     +S    N 
Sbjct: 111 TVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNP 170

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           LL+ALVK+N   +  Y++KE  +     +  TFNI I GL R G++ KA +   DM ++G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 292 CSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            SP++VTYNTL+ G C+     ++ +    +KE+   ++  P+ VT+ ++I G+CK   +
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM-LANKICPNEVTFNTLIDGFCKDENV 289

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A   + EM   G+KP+ VT+N LI+G    G +  A  + ++M+  G  P++VT+++L
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL 349

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G+C+   + +  K+ D++  + L PNV TF  +I+A CKE  + +       +    +
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P    YN +I G C+  ++  A  ++ EME K  K D VT+ ILI G C   +   A  
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK 469

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           + N+M  +G  P+ +T N+L+      G    A  +  R  +++
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 223/436 (51%), Gaps = 6/436 (1%)

Query: 129 VIKRLDNPKLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           V+  + N +L   +  F+R  +     S  + N ++ +L +      V+ V+  M     
Sbjct: 137 VLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRI 196

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE--- 244
             N      F++   RAGK + A+  +   +   ++ +   YN+L++   K+ +A +   
Sbjct: 197 HTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYK 256

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A    KE       P+  TFN LI G  +   V  A + F +M   G  P+IVTYN+LI+
Sbjct: 257 AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLIN 316

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC   ++    +L  ++       P++VTY ++I+G+CK   M +AT ++++++   + 
Sbjct: 317 GLCNNGKLEEAIDLWDKM-VGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ +TFN +ID + K G M     +   ML  G LP+V T++ LI G CR   L    +L
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +EM+ K L  +V T+ ILI+ LCK ++  +A + L ++    L P    YN ++DG+C 
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 495

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G +  A  +   ME++R +P+ VT+ +LI G+C   ++  A  + N+ML  G  P+  T
Sbjct: 496 EGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 555

Query: 545 VNSL-ISCLLKGGMPN 559
            + + +  L KG  P+
Sbjct: 556 YDIVRLEMLEKGFSPD 571


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 210/413 (50%), Gaps = 4/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++R LC  G       +FD    +G  P+       ++   + G   AA  LL   
Sbjct: 222 TFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM 281

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+++++L K     EA  +F E       PD +T+N LI  L  + E 
Sbjct: 282 VQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEW 341

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K       +M +    P++V ++T++  LC+   +A  H+++ ++  K    PDVVTYT+
Sbjct: 342 KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV-DMMIKRGVEPDVVTYTA 400

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+C   +MD+A  +++ M   G  P+  ++N+LI+G+ ++  M  A  + E+M   G
Sbjct: 401 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 460

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + D VT+++LI G C  G+L   + L  EM      P++ T+ IL++ LCK + L +A 
Sbjct: 461 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 520

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK ++ ++L     +YN  IDG C+AG ++ A  + + +  K  +PD  T+ I+I G 
Sbjct: 521 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 580

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C +G + EA  +F KM   GC+ D    N++I   L+    NE F   Q   E
Sbjct: 581 CKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRS---NETFGATQLLQE 630



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 178/349 (51%), Gaps = 2/349 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            +  N L+N+         A  +  +  +L  QPD  TFN LI+GL   G++ +A   F 
Sbjct: 185 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFD 244

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
                G  PD+VTY TL++GLC+V   +    LL+ +  +    P+V+ Y ++I   CK 
Sbjct: 245 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM-VQKNCRPNVIAYNTIIDSLCKD 303

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            ++ +A  +++EM + GI P   T+N LI     +        +   M++   +P+VV F
Sbjct: 304 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 363

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S+++D  C+ G +     + D M  + + P+V T+T L++  C  + +++A +    +  
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
              VP    YN +I+G+C+   +D+A  ++ +M  +    D VT+  LI G C  GR+  
Sbjct: 424 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 483

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           AI++F++M+  G  PD +T   L+  L K     EA  ++ +A E  NL
Sbjct: 484 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM-VLLKAIEGSNL 531



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 155/365 (42%), Gaps = 71/365 (19%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D+A+  F     ++  P T  F  L+  ++++            M SFG        
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFG-------- 180

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
                                         PDV T   +I+ +C L ++  A  +  ++ 
Sbjct: 181 ----------------------------IPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 212

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P   TFN LI G    G +  A ++ ++ +  G+ PDVVT+ +L++G C+ G  +
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN--- 476
             ++L   M  KN  PNV  +  +I++LCK+ ++ +A     ++    + P  F YN   
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332

Query: 477 --------------------------------PVIDGFCKAGNVDEANVIVAEMEEKRCK 504
                                            V+D  CK G +  A+ +V  M ++  +
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD VT+T L+ GHC++  M EA+ +F+ M+  GC P+  + N LI+   +    ++A  +
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452

Query: 565 MQRAS 569
           +++ S
Sbjct: 453 LEQMS 457



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 11/259 (4%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           +NTL   L   N +   H             P  V +T +++   K+        +  +M
Sbjct: 128 FNTLDDALSSFNRMLHMHP-----------PPSTVDFTKLLTSIAKMKHYSTVLSLSTQM 176

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
           +S GI P   T N+LI+ F  +  +  A  +  ++L  G  PD  TF++LI G C  G++
Sbjct: 177 DSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKI 236

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + L L D+  G+   P+V T+  L+N LCK    + A R L+ +   +  P    YN +
Sbjct: 237 GEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTI 296

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           ID  CK   V EA  + +EM  K   PD  T+  LI   C         ++ N+M+    
Sbjct: 297 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356

Query: 539 APDDITVNSLISCLLKGGM 557
            P+ +  ++++  L K GM
Sbjct: 357 MPNVVVFSTVVDALCKEGM 375


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 212/413 (51%), Gaps = 2/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y  V+R L   G   + + +FD M      P+       + +  + G    +  LL++ 
Sbjct: 178 AYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKV 237

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ + F  N  +  L +    +EAV +  E    Y  PD  T+N L++GL +  +V
Sbjct: 238 LKRGMSANKFTCNIWIRGLCEDGRLEEAVALV-ERMGAYVAPDVVTYNTLMRGLCKDSKV 296

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A ++   M + GC PD  TYNT+I G C+   +    ELLK+  FK  F PD VTY S
Sbjct: 297 QEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKG-FVPDRVTYCS 355

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C  G +++A  ++NE  +  +KP  V +N L+ G  + G ++ A  +   M+  G
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+ T++ +I+G C+ G ++    + ++   K   P+V+TF  LI+  CK  +L+ A 
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSAL 475

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + ++++    + P    YN V++G CKAG   E N    EM  K C+P+ +T+ ILI   
Sbjct: 476 QLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 535

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C   ++ EA  +  +M + G  PD ++ N+LI    + G  + A+ + Q+  E
Sbjct: 536 CKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDE 588



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 217/439 (49%), Gaps = 20/439 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++   C+ G L ++ +++ D +   G +P+       ++     G  + A  L ++
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFK-GFVPDRVTYCSLINGLCAEGDIERALELFNE 375

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +  ++     +YNSL+  L +Q     A+ +  E       PD WT+NI+I GL ++G 
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN 435

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A     D    G  PD+ T+NTLI G C+  ++    +L++ + +    +PDV+TY 
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM-WTYGIAPDVITYN 494

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           SV++G CK GK  +    + EM   G +P+A+T+N+LI+ F K+  +  A  +  RM   
Sbjct: 495 SVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQD 554

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD V+F++LI G+CRNG L+    L  ++  K  S    TF ILI A   +  +  A
Sbjct: 555 GLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMA 614

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +   ++      P  + Y  ++DG CKA NVD A   +AEM  K   P   TF  ++  
Sbjct: 615 EKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNL 674

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC---------------LLKGGMPNEA 561
             M  R+ EA++I + M+R+G  P+   V++++S                + KG +   A
Sbjct: 675 LAMNHRVSEAVAIIHIMVRMGVVPE--VVDTILSTDKKEIAAPKILVEELMKKGHISYRA 732

Query: 562 FRIMQRASEDQNLQLPSWK 580
           + ++     D  L   + K
Sbjct: 733 YEVLHEGVRDNKLTRKARK 751



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 204/407 (50%), Gaps = 6/407 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           T N+ +R LCE G L ++V +V    R   ++ P+       +    +  K   A   L 
Sbjct: 248 TCNIWIRGLCEDGRLEEAVALV---ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLG 304

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +          F YN++++   K     EA  + K+       PD  T+  LI GL   G
Sbjct: 305 RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++++A E F +  +    PD+V YN+L+ GLCR   +    +++ E+  +    PD+ TY
Sbjct: 365 DIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM-VEEGCHPDIWTY 423

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I+G CK+G +  A  + N+    G  P   TFN LIDG+ K   + SA  + ERM +
Sbjct: 424 NIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWT 483

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           +G  PDV+T++S+++G C+ G+  +  +  +EM  K   PN  T+ ILI   CK N+L +
Sbjct: 484 YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 543

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   + ++  + LVP    +N +I GFC+ G++D A ++  +++EK       TF ILI 
Sbjct: 544 ASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 603

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            +  K  M  A  IF +M+  G  PD  T   L+  L K    + A+
Sbjct: 604 AYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAY 650



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 208/443 (46%), Gaps = 3/443 (0%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQV 177
           + L PL    +       +L      F R++L +   +   YN +M +L     HD    
Sbjct: 68  DSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHK 127

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           V+  M + G  P++      + S    G+   A  LL              Y +++  L 
Sbjct: 128 VYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLY 187

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
              +   A ++F E       PD  TFN ++  L + G+V ++      +   G S +  
Sbjct: 188 AHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKF 247

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T N  I GLC    +     L++  +  +  +PDVVTY +++ G CK  K+ +A      
Sbjct: 248 TCNIWIRGLCEDGRLEEAVALVE--RMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGR 305

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M + G  P   T+N +IDG+ K G +  A  + +  +  G++PD VT+ SLI+G C  G 
Sbjct: 306 MMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGD 365

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + + L+L +E + K+L P++  +  L+  LC++  +  A + + ++      P  + YN 
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNI 425

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G CK GN+ +A V++ +   K   PD  TF  LI G+C + ++  A+ +  +M   G
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485

Query: 538 CAPDDITVNSLISCLLKGGMPNE 560
            APD IT NS+++ L K G   E
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKE 508



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 178/391 (45%), Gaps = 45/391 (11%)

Query: 221 EVTMSTF-MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT--FNILIQGLSRIGEV 277
           E+T ST   Y +L+  LV     D+         R +  PD+    +   IQ  +R G +
Sbjct: 29  ELTASTIPAYRALIRELVSAGRLDDVDAALAS-ARSHLAPDSLQPLYVASIQAYARAGRL 87

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A + F  M  F C P    YN ++  L       + H++   +   +  +PD  T+T 
Sbjct: 88  RAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRM-LAAGVAPDARTHTV 146

Query: 338 VISGYCKLGKMDKATGIYNEMN--SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +  +C  G+   A  +   ++   C  KP+A  +  ++ G    G+  +A ++ + ML 
Sbjct: 147 RLKSFCLTGRPHVALRLLRSLSERGCDAKPAA--YCTVVRGLYAHGHGYNARHLFDEMLG 204

Query: 396 FGYLPDVVTFSSL-----------------------------------IDGYCRNGQLNQ 420
               PDV TF+++                                   I G C +G+L +
Sbjct: 205 RDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEE 264

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            + L + M G  ++P+V T+  L+  LCK++++ +A ++L ++     +P  F YN +ID
Sbjct: 265 AVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIID 323

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+CK+G + EA  ++ +   K   PD+VT+  LI G C +G +  A+ +FN+       P
Sbjct: 324 GYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKP 383

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           D +  NSL+  L + G+   A ++M    E+
Sbjct: 384 DLVVYNSLVKGLCRQGLILHALQVMNEMVEE 414


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 213/413 (51%), Gaps = 2/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y  V+R L   G     + +FD M      P+       + +  + G    +  LL++ 
Sbjct: 82  AYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKV 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++++ F  N  +  L +    +EAV +  E    Y  PD  T+N L++GL +  +V
Sbjct: 142 LKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV-ESMDAYIAPDVVTYNTLMRGLCKDSKV 200

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A ++   M + GC PD  TYNT+I G C+ + +    ELLK+  FK  F PD VTY S
Sbjct: 201 QEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKG-FVPDRVTYCS 259

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C  G +++A  ++NE  +  +KP  V +N L+ G  + G ++ A  +   M+  G
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+ T++ +I+G C+ G ++    + ++   K   P+V+TF  +I+  CK  +L+ A 
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSAL 379

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + ++++    + P    YN V++G CKAG   E N    EM  K C+P+ +T+ ILI   
Sbjct: 380 QLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 439

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C   ++ EA  +  +M + G  PD I+ N+LI    + G  + A+ + Q+  E
Sbjct: 440 CKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDE 492



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 204/394 (51%), Gaps = 5/394 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++   C+   L ++ +++ D +   G +P+       ++     G  + A  L ++
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFK-GFVPDRVTYCSLINGLCAEGDVERALELFNE 279

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +  ++     +YNSL+  L +Q     A+ +  E       PD WT+NI+I GL ++G 
Sbjct: 280 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGN 339

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A     D    G  PD+ T+NT+I G C+  ++    +L++ + +    +PD +TY 
Sbjct: 340 ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERM-WMYGIAPDAITYN 398

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           SV++G CK GK  +    + EM   G +P+A+T+N+LI+ F K+  +  A  +  RM   
Sbjct: 399 SVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQD 458

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD ++F++LI G+CRNG L+    L  ++  K  S    TF ILI A   +  +  A
Sbjct: 459 GLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMA 518

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +   ++      P  + Y  ++DG CKA NVD A V +AEM  K   P   TF  ++  
Sbjct: 519 EKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNS 578

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             M  R+ EA++I + M+R+G  P+   V++++S
Sbjct: 579 LAMNHRVSEAVAIIHIMVRMGVVPE--VVDTILS 610



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 201/406 (49%), Gaps = 4/406 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T N+ +R LCE G  +    + + M  D ++ P+       +    +  K   A   L +
Sbjct: 152 TCNIWIRGLCEGGRLEEAVALVESM--DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRR 209

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                     F YN++++   K++   EA  + K+       PD  T+  LI GL   G+
Sbjct: 210 MMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGD 269

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V++A E F +  +    PD+V YN+L+ GLCR   +    +++ E+  +    PD+ TY 
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM-VEDGCHPDIWTYN 328

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            VI+G CK+G +  A  + N+    G  P   TFN +IDG+ K   + SA  + ERM  +
Sbjct: 329 IVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMY 388

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD +T++S+++G C+ G+  +  +  +EM  K   PN  T+ ILI   CK N+L +A
Sbjct: 389 GIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 448

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              + ++  + LVP    +N +I GFC+ G++D A ++  +++EK       TF ILI  
Sbjct: 449 SGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 508

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           +  K  M  A  IF +M+  G  PD  T   L+    K    + A+
Sbjct: 509 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAY 554



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 199/449 (44%), Gaps = 37/449 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN +M +L     HD    V+  M S G  P++      + S    G+   A  LL   
Sbjct: 12  AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN------------ 265
                 +    Y +++  L    +  +A ++F E  R    PD  TFN            
Sbjct: 72  PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131

Query: 266 -----------------------ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                  I I+GL   G +++A      M ++  +PD+VTYNTL
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTL 190

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + GLC+ ++V    + L+ +       PD  TY ++I GYCK   + +AT +  +    G
Sbjct: 191 MRGLCKDSKVQEAAQYLRRM-MNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKG 249

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P  VT+  LI+G    G++  A  +     +    PD+V ++SL+ G CR G +   L
Sbjct: 250 FVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 309

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           ++ +EM      P+++T+ I+IN LCK   ++DA   +        +P  F +N +IDG+
Sbjct: 310 QVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGY 369

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK   +D A  +V  M      PD +T+  ++ G C  G+  E    F +M+  GC P+ 
Sbjct: 370 CKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 429

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
           IT N LI    K     EA  ++ R S+D
Sbjct: 430 ITYNILIENFCKINQLEEASGVIVRMSQD 458



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 145/322 (45%), Gaps = 41/322 (12%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M  FGC P    YN ++  L       + H++   +   +  +PD  T+T  I  +C  G
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRM-LSAGVAPDARTHTVRIKSFCITG 59

Query: 347 KMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +   A  +   +    C +KP A  +  ++ G    G+   A ++ + ML     PDV T
Sbjct: 60  RPHVALRLLRSLPERGCDVKPLA--YCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117

Query: 405 FSSL-----------------------------------IDGYCRNGQLNQGLKLCDEMK 429
           F+++                                   I G C  G+L + + L + M 
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD 177

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              ++P+V T+  L+  LCK++++ +A ++L+++     +P  F YN +IDG+CK   + 
Sbjct: 178 AY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           EA  ++ +   K   PD+VT+  LI G C +G +  A+ +FN+       PD +  NSL+
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 550 SCLLKGGMPNEAFRIMQRASED 571
             L + G+   A ++M    ED
Sbjct: 297 KGLCRQGLILHALQVMNEMVED 318


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 216/428 (50%), Gaps = 7/428 (1%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE-FFVSSCIRA 204
           S  +  L  S  TYN ++  LC+ G +   + +   M + G  P++       V SC R 
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
              +A +      R G V      ++SL+    +  + D+A+  F++  +    PD   +
Sbjct: 238 NFSEAKEIFGEMLRQG-VVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            +L+ G  R G + +A +   +M   GC  D++ YNT+++GLC+   +    +L  E+  
Sbjct: 297 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 356

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +    PD  T+T++I G+C+ G M KA  ++  M    IKP  V +N LIDGF KVG M 
Sbjct: 357 RGAL-PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 415

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  + + M+S    P+ +T+  LI+ YC  G +++  +L D M  K + P + T   +I
Sbjct: 416 KASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 475

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
              C+    + A  FL ++    + P    YN +I+GF +  N+D+A + + +ME++   
Sbjct: 476 KGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLL 535

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR- 563
           PD +T+ +++ G C +GRM EA  +  KM+  G  PD  T  +LI+  +     NEAFR 
Sbjct: 536 PDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRF 595

Query: 564 ---IMQRA 568
              ++QR 
Sbjct: 596 HDEMLQRG 603



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 203/398 (51%), Gaps = 4/398 (1%)

Query: 173 DSVQVVFDYMRS---DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMY 229
           D V++ ++  R     G   N   +   V++  + GK D  K  LS+     +      Y
Sbjct: 97  DWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTY 156

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+L+ A  ++   +EA  +         +P  +T+N +I GL + G   +A     +M +
Sbjct: 157 NTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN 216

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G SPD  TYNTL+   CR +  +   E+  E+  +    PD+V+++S+I+ + +   +D
Sbjct: 217 IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM-LRQGVVPDLVSFSSLIAVFSRNRHLD 275

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A   + +M   G+ P  V + VL+ G+ + GNM+ A  +R+ ML  G + DV+ +++++
Sbjct: 276 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 335

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +G C+   L    KL DEM  +   P+ YTFT LI+  C++  +  A      +   ++ 
Sbjct: 336 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 395

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +IDGFCK G +++A+ +   M  ++  P+ +T+ ILI  +C  G + EA  +
Sbjct: 396 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 455

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++ M+  G  P  +T N++I    + G  ++A   + R
Sbjct: 456 WDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 493



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 187/381 (49%), Gaps = 8/381 (2%)

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N+ + +  + + ++A K           R     +S    NSLL  LVK +  + A  + 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           +E  R   + + +T NI++  L + G+      F  +M   G   D+VTYNTLI   CR 
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             +    E++  +  K    P + TY ++I+G CK G+  +A GI  EM + G+ P   T
Sbjct: 167 GLLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT 225

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N L+    +  N   A+ +   ML  G +PD+V+FSSLI  + RN  L+Q L    +MK
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              L P+   +T+L++  C+   + +A +   ++     V     YN +++G CK   + 
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 345

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A+ +  EM E+   PD  TFT LI GHC  G M +A+S+F  M +    PD +  N+LI
Sbjct: 346 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 405

Query: 550 SCLLKGGMPNEAFRIMQRASE 570
               K G        M++ASE
Sbjct: 406 DGFCKVGE-------MEKASE 419



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 57/139 (41%)

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
           N   N   F +LI    +  +L +     + L+    +      N ++ G  K   V+ A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             +  E+     + +  T  I++   C  G+  +  S  ++M   G   D +T N+LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 552 LLKGGMPNEAFRIMQRASE 570
             + G+  EAF IM   ++
Sbjct: 163 YCREGLLEEAFEIMNSMAD 181


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 215/416 (51%), Gaps = 3/416 (0%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++  LC+ G L+++  ++ D M++ G  PN       V  C R G    A  ++  
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLD-MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIEL 292

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V    + YN +++   KQ    EA+ + +E   L   PD  T+N LI G    G 
Sbjct: 293 MSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGS 352

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            ++ F+   +M   G  P+ VTYN ++    +  ++    + +++++ +S   PD+VTY 
Sbjct: 353 SEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKME-ESGCLPDIVTYN 411

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++IS +CK+GKMD+A  + +EM   G+K   VT N ++    +   +  A  +       
Sbjct: 412 TLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRR 471

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           GY  D V++ +LI GY ++ + +Q L+L DEMK K + P++ T+  +I  LC+  + N A
Sbjct: 472 GYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQA 531

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L +L  + LVP    YN +I G+C+ G V++A     +M EK  KPD VT   L+ G
Sbjct: 532 IDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCG 591

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            C +G + +A+ +FN  +  G   D ++ N++I  L K     EAF +++   E +
Sbjct: 592 LCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKK 647



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 203/386 (52%), Gaps = 4/386 (1%)

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK---QNNADEAV 246
           + P+++  + + +  G+   A  + ++ +   +  +    N+LLNALV+    ++   + 
Sbjct: 123 SKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSK 182

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F ++ ++  + +T +FNILI G        +A      M  +GC PD +TYNT++ GL
Sbjct: 183 AVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGL 242

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+   +    +LL ++K K  F P+  T+  ++ G C+LG + +A  +   M+   + P 
Sbjct: 243 CKKGRLNEARDLLLDMKNKGLF-PNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           A T+NV+I GF K G +  A  +RE M +    PDVVT+++LI+G   +G   +G KL +
Sbjct: 302 AWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM+G+ + PN  T+ +++    K+ ++++  + +++++ +  +P    YN +I   CK G
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +DEA  ++ EM  K  K D VT   ++   C + ++ EA  +     R G   D+++  
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQ 572
           +LI    K    ++A R+     E +
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKE 507



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 180/380 (47%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G       + + M +    P+       ++ C   G  +    L+ + 
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  ++  YN ++   VK+   DE     ++       PD  T+N LI    ++G++
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF    +MG  G   D VT NT++  LCR  ++   H+LL   + +  F  D V+Y +
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFV-DEVSYGT 482

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY K  K  +A  +++EM    I PS +T+N +I G  ++G    A    + +L  G
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD +T++++I GYC+ GQ+ +  +  ++M  KN  P+V T   L+  LCKE  L  A 
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +                YN +I   CK     EA  ++ EMEEK+  PD  T+  ++ G 
Sbjct: 603 KLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGL 662

Query: 518 CMKGRMVEAISIFNKMLRIG 537
              GRM +A    +K+   G
Sbjct: 663 TDAGRMKDAEEFISKIAEKG 682



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 170/353 (48%), Gaps = 1/353 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL L+    TYN ++    E G  +    + + M   G  PNS      V   ++ GK D
Sbjct: 330 NLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMD 389

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
                + +            YN+L++   K    DEA  +  E  R   + D  T N ++
Sbjct: 390 EVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTML 449

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           + L R  ++ +A +        G   D V+Y TLI G  +  + ++   L  E+K K E 
Sbjct: 450 RALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEK-EI 508

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P ++TY S+I+G C++GK ++A    +E+   G+ P  +T+N +I G+ + G +  A  
Sbjct: 509 IPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQ 568

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
              +M+   + PDVVT ++L+ G C+ G L + LKL +    K    +  ++  +I +LC
Sbjct: 569 FHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLC 628

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           KE R  +A   L++++   L P  + YN ++ G   AG + +A   ++++ EK
Sbjct: 629 KEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK 681



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 24/321 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C++G  D    + D M   G   +   +   + +  R  K D A  LL   
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSA 468

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R     +    Y +L+    K   A +A+ ++ E       P   T+N +I GL ++G+ 
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   ++   G  PD +TYNT+I G C+  +V +  +   ++  K+ F PDVVT  +
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN-FKPDVVTCNT 587

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK G ++KA  ++N   S G    AV++N +I    K      A  + E M    
Sbjct: 588 LLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKK 647

Query: 398 YLPDVVTFSSLIDGYCRNGQL-----------------NQGLKLCDEMKGKNLS------ 434
             PD  T+++++ G    G++                 NQ L+L      +         
Sbjct: 648 LGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPH 707

Query: 435 PNVYTFTILINALCKENRLND 455
           PN   ++  IN LC + R  D
Sbjct: 708 PNAIAYSNKINELCSQGRYKD 728


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 201/407 (49%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G +   + V D M   G  P++      +  C R      A+ +  + 
Sbjct: 169 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 228

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      +++L+  L K    D+A+  F++       PD   + ILI G  R G +
Sbjct: 229 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M   GC  D+VTYNT+++GLC+   ++   EL  E+  +  F PD  T+T+
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF-PDFYTFTT 347

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GY K G M+KA  ++  M    +KP  VT+N LIDGF K   M     +   M+S  
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 407

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +++  LI+GYC  G +++  +L DEM  K     + T   ++   C+      A 
Sbjct: 408 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 467

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            FL  +    +VP    YN +I+GF K  N+D A  +V +ME     PD +T+ +++ G 
Sbjct: 468 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 527

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             +GRM EA  I  KM+  G  PD  T  SLI+  +      EAFR+
Sbjct: 528 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRV 574



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 208/386 (53%), Gaps = 10/386 (2%)

Query: 175 VQVVFDYMRSDGHLPNSPMI-EFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMY 229
           V++V   + + G+  ++P++ +  V + ++A K    C+A + L S+     + +S    
Sbjct: 10  VEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK----GLCVSINAC 65

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           NSLL  LVK    D A  +++E  R   Q + +T NI+I  L +  +++    F  DM  
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  PD+VTYNTLI+  CR   +    EL+  +  K    P V TY ++I+G CK GK  
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG-LKPCVFTYNAIINGLCKTGKYL 184

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A G+ +EM   G+ P   T+N+L+    +  NM+ AE + + M S G +PD+V+FS+LI
Sbjct: 185 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
               +NG L+Q LK   +MK   L+P+   +TILI   C+   +++A +   ++     V
Sbjct: 245 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCV 304

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                YN +++G CK   + EA+ +  EM E+   PD  TFT LI G+   G M +A+++
Sbjct: 305 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 364

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKG 555
           F  M++    PD +T N+LI    KG
Sbjct: 365 FEMMIQRNLKPDVVTYNTLIDGFCKG 390



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 213/418 (50%), Gaps = 11/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ + C  GL +    + D M   G  P        ++   + GK   AKG+L + 
Sbjct: 134 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 193

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++  T  YN LL    + +N  +A  +F E       PD  +F+ LI  LS+ G +
Sbjct: 194 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 253

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A ++F DM + G +PD V Y  LI G CR   ++   ++  E+  +     DVVTY +
Sbjct: 254 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM-LEQGCVLDVVTYNT 312

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK   + +A  ++ EM   G+ P   TF  LI+G+ K GNM  A  + E M+   
Sbjct: 313 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 372

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+++LIDG+C+  ++ +  +L ++M  + + PN  ++ ILIN  C    +++A 
Sbjct: 373 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 432

Query: 458 RFLKQLKWNDLVPKPF-----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           R      W+++V K F       N ++ G+C+AGN  +A+  ++ M  K   PD +T+  
Sbjct: 433 RL-----WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G   +  M  A ++ NKM   G  PD IT N +++   + G   EA  IM +  E
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 545



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 202/402 (50%), Gaps = 1/402 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S    N ++  L ++G  D    ++  +   G   N   +   +++  +  K +  K  L
Sbjct: 61  SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 120

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V      YN+L+NA  +Q   +EA  +         +P  +T+N +I GL + 
Sbjct: 121 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 180

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+  +A     +M   G SPD  TYN L+   CR + +     +  E+  +    PD+V+
Sbjct: 181 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVS 239

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           ++++I    K G +D+A   + +M + G+ P  V + +LI GF + G M  A  +R+ ML
Sbjct: 240 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 299

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G + DVVT++++++G C+   L++  +L  EM  + + P+ YTFT LIN   K+  +N
Sbjct: 300 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 359

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    + +   +L P    YN +IDGFCK   +++ N +  +M  +R  P+ +++ ILI
Sbjct: 360 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 419

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            G+C  G + EA  ++++M+  G     IT N+++    + G
Sbjct: 420 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAG 461



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 203/415 (48%), Gaps = 11/415 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++ +LC+    ++ +     M   G  P+       +++  R G  + A  L+   
Sbjct: 99  TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 158

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YN+++N L K      A  +  E  ++   PDT T+NIL+    R   +
Sbjct: 159 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 218

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F +M S G  PD+V+++ LI  L +   + +  +  +++K  +  +PD V YT 
Sbjct: 219 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMK-NAGLAPDNVIYTI 277

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+ G M +A  + +EM   G     VT+N +++G  K   +  A+ +   M   G
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  TF++LI+GY ++G +N+ + L + M  +NL P+V T+  LI+  CK + +    
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397

Query: 458 RFLKQLKWNDLV-----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
                  WND++     P    Y  +I+G+C  G V EA  +  EM EK  +   +T   
Sbjct: 398 EL-----WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++ G+C  G  V+A    + ML  G  PD IT N+LI+  +K    + AF ++ +
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNK 507



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 164/302 (54%), Gaps = 1/302 (0%)

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           N L+ GL ++G V  A+E + ++   G   ++ T N +I+ LC+  ++      L +++ 
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K  F PDVVTY ++I+ YC+ G +++A  + + M+  G+KP   T+N +I+G  K G  +
Sbjct: 126 KGVF-PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 184

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A+ + + ML  G  PD  T++ L+   CRN  +    ++ DEM  + + P++ +F+ LI
Sbjct: 185 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
             L K   L+ A ++ + +K   L P   +Y  +I GFC+ G + EA  +  EM E+ C 
Sbjct: 245 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCV 304

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            D VT+  ++ G C +  + EA  +F +M   G  PD  T  +LI+   K G  N+A  +
Sbjct: 305 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 364

Query: 565 MQ 566
            +
Sbjct: 365 FE 366



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 3/240 (1%)

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           + +  ++  Y +  K+ +    +  + S G+  S    N L+ G  KVG +  A  + + 
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ++  G   +V T + +I+  C+N ++        +M+ K + P+V T+  LINA C++  
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L +A   +  +    L P  F YN +I+G CK G    A  ++ EM +    PD  T+ I
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRAS 569
           L++  C    M++A  IF++M   G  PD ++ ++LI  L K G  ++A   FR M+ A 
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 57/138 (41%)

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
           N   N   F +L+    +  +L +     + LK   L       N ++ G  K G VD A
Sbjct: 22  NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             I  E+     + +  T  I+I   C   ++    S  + M   G  PD +T N+LI+ 
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 552 LLKGGMPNEAFRIMQRAS 569
             + G+  EAF +M   S
Sbjct: 142 YCRQGLLEEAFELMDSMS 159


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 221/442 (50%), Gaps = 15/442 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +M S C+ G       V D MR  G  PN       V+     G+ D AK L+ Q 
Sbjct: 209 TFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQM 268

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +S   YN L+    K+   +EA  + +E     + P   T+N ++  L R+G V
Sbjct: 269 SMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRV 328

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +   M +    PD+V+YNTLI G  R+   A    L  E++ K+   P VVTY +
Sbjct: 329 SDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN-LVPSVVTYNT 387

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C+ G +D A G+ ++M   G+ P  VTF +L+ GF ++GN+  A+ + + MLS G
Sbjct: 388 LIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRG 447

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD + +++ I G  + G  ++   + +EMK +   P++ T+ +LIN LCK    +DA 
Sbjct: 448 LKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDAN 507

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +++++   +VP    Y  +I     +G + +A  + ++M +K   P  VT+T+LI  +
Sbjct: 508 ELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSY 567

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE------- 570
            ++GR+  A   F++M   G +P+ IT N+LI  L K  M + A+ +             
Sbjct: 568 AVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNK 627

Query: 571 -------DQNLQLPSWKKAVPL 585
                  ++N  L  W+ A+ L
Sbjct: 628 YTYTILINENSNLQYWQDALKL 649



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 197/405 (48%), Gaps = 1/405 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L L  S  TYN ++R  C+  + +    +   M   G LP        + S  R G+   
Sbjct: 271 LGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSD 330

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+  L      ++      YN+L+    +  N  EA+ +F E       P   T+N LI 
Sbjct: 331 ARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLID 390

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  R G +  A     DM   G  PD+VT+  L+ G C++  +    EL  E+       
Sbjct: 391 GGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEM-LSRGLK 449

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD + YT+ I G  KLG   KA G+  EM + G  P  +T+NVLI+G  K+GN   A  +
Sbjct: 450 PDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANEL 509

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M   G +PD VT++S+I  +  +G L +  ++  +M  K + P+V T+T+LI++   
Sbjct: 510 VQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAV 569

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             RL+ A+++  +++   + P    YN +I G CK   +D A  + AEME K   P+K T
Sbjct: 570 RGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYT 629

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +TILI  +       +A+ ++  ML     PD  T ++L+  L K
Sbjct: 630 YTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 202/405 (49%), Gaps = 1/405 (0%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           +  VN  L    +  N V++ L +  + + V+ V+  M      P        + S  + 
Sbjct: 161 YKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKE 220

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G+   A  +L   R      +   YN L+N L  +   D A  + ++   L  +    T+
Sbjct: 221 GEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTY 280

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           N LI+G  +    ++A +   +M   G  P +VTYNT++  LCR+  V+     L +V  
Sbjct: 281 NPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYL-DVMV 339

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
             +  PD+V+Y ++I GY +LG   +A  +++E+ S  + PS VT+N LIDG  + GN+ 
Sbjct: 340 NEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLD 399

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A+ M++ M+  G  PDVVTF+ L+ G+C+ G L    +L DEM  + L P+   +T  I
Sbjct: 400 IAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRI 459

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
               K    + A    +++K     P    YN +I+G CK GN D+AN +V +M  +   
Sbjct: 460 VGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIV 519

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           PD VT+T +I  H + G + +A  +F+ ML+ G  P  +T   LI
Sbjct: 520 PDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLI 564



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 171/338 (50%), Gaps = 1/338 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L  L  ++  +E   ++    +   +P   TFN ++    + GEV +A E    M  
Sbjct: 176 NRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRM 235

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
           FGC P+ V+YN L++GL    E  R  EL++++           TY  +I G+CK    +
Sbjct: 236 FGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLG-LKVSAHTYNPLIRGFCKKEMFE 294

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  +  EM   G  P+ VT+N ++    ++G +  A    + M++   +PD+V++++LI
Sbjct: 295 EANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLI 354

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            GY R G   + L L  E++ KNL P+V T+  LI+  C+   L+ A+     +  + L 
Sbjct: 355 YGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLC 414

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    +  ++ GFC+ GN+  A  +  EM  +  KPD + +T  I+G    G   +A  +
Sbjct: 415 PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM 474

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +M   G  PD IT N LI+ L K G  ++A  ++Q+
Sbjct: 475 KEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQK 512



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 1/304 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD    N +++ L     V +  E +  M      P IVT+NT++   C+  EV R  E+
Sbjct: 170 PDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEV 229

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  ++      P+ V+Y  +++G    G+ D+A  +  +M+  G+K SA T+N LI GF 
Sbjct: 230 LDVMRMFG-CDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFC 288

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K      A  +R  ML  G LP VVT+++++   CR G+++   +  D M  ++L P++ 
Sbjct: 289 KKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLV 348

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           ++  LI    +     +A     +L+  +LVP    YN +IDG C+ GN+D A  +  +M
Sbjct: 349 SYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDM 408

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +    PD VTFTIL+ G C  G +  A  +F++ML  G  PD I   + I   LK G P
Sbjct: 409 IKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNP 468

Query: 559 NEAF 562
           ++AF
Sbjct: 469 SKAF 472



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 151/365 (41%), Gaps = 69/365 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M SLC +G     +   D M ++  +P+       +    R G    A  L S+ 
Sbjct: 314 TYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSEL 373

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG------- 270
           R   +  S   YN+L++   +  N D A  M  +  +    PD  TF IL++G       
Sbjct: 374 RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433

Query: 271 ----------LSR-------------IGEVK-----KAFEFFYDMGSFGCSPDIVTYNTL 302
                     LSR             +GE+K     KAF    +M + G  PD++TYN L
Sbjct: 434 PMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVL 493

Query: 303 ISGLCRVNEVARGHELLKEVKF----------------------------------KSEF 328
           I+GLC++      +EL+++++                                   K   
Sbjct: 494 INGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGI 553

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P VVTYT +I  Y   G++D A   ++EM   G+ P+ +T+N LI G  K   M  A  
Sbjct: 554 HPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYN 613

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M S G  P+  T++ LI+           LKL  +M  + + P+  T + L+  L 
Sbjct: 614 LFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLS 673

Query: 449 KENRL 453
           K+ +L
Sbjct: 674 KDYKL 678



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 1/267 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++R  C+MG     + +FD M S G  P+       +   ++ G    A G+  + 
Sbjct: 419 TFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEM 478

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +          YN L+N L K  N D+A  + ++       PD  T+  +I      G +
Sbjct: 479 KAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLL 538

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA E F DM   G  P +VTY  LI        +    +   E++ K   SP+V+TY +
Sbjct: 539 RKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG-VSPNVITYNA 597

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK   MD A  ++ EM S G+ P+  T+ +LI+    +     A  + + ML   
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDRE 657

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKL 424
             PD  T S+L+    ++ +L   L+L
Sbjct: 658 IKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 103/212 (48%)

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  + K   ++K   ++ +M + G+ P     N ++        +   E +   M+   
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQ 202

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P +VTF++++D  C+ G++ + +++ D M+     PN  ++ +L+N L  +   + A+
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++Q+    L      YNP+I GFCK    +EAN +  EM  +   P  VT+  ++   
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C  GR+ +A    + M+     PD ++ N+LI
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLI 354


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 219/433 (50%), Gaps = 4/433 (0%)

Query: 137 KLGLKFLEFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           ++G  F   +++ L L H     T+  ++R +   G       +FD M  +G  P+    
Sbjct: 111 RVGFAFSVLAKI-LKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTY 169

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G   AA  LL          + F YN+++++L K     EA  +F E   
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT 229

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PD +T+N LI  L  + E K       +M      PD+V++NT++  LC+  +V  
Sbjct: 230 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            H+++ ++  +    P+VVTYT+++ G+C L +MD+A  +++ M   G  P+ +++N LI
Sbjct: 290 AHDVVDKM-IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+ K+  +  A Y+   M     +PD VT+S+LI G C   +L   + L  EM   +  
Sbjct: 349 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 408

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PN+ T+ IL++ LCK   L +A   LK ++ ++L P   + N  IDG C+AG ++ A  +
Sbjct: 409 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 468

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + +  K  +PD  T++I+I G C +G + EA  +F +M   GC  +    N++    L+
Sbjct: 469 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 528

Query: 555 GGMPNEAFRIMQR 567
               + A +++Q 
Sbjct: 529 NNETSRAIQLLQE 541



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 214/436 (49%), Gaps = 20/436 (4%)

Query: 150 LSLNHSFKTY---------NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           LSL+H   ++         ++++ S C +        V   +   GH P++      +  
Sbjct: 81  LSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRG 140

Query: 201 CIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
               GK   A  L  +     FRP  VT     Y +L+N L K  N   A+ +     + 
Sbjct: 141 IYVEGKIGEALHLFDKMIGEGFRPDVVT-----YGTLINGLCKVGNTSAAIRLLGSMVQK 195

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             QP+ + +N +I  L +  +V +AF  F +M + G SPDI TYN+LI  LC + E    
Sbjct: 196 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 255

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             LL E+   S+  PDVV++ +V+   CK GK+ +A  + ++M   G++P+ VT+  L+D
Sbjct: 256 ATLLNEM-VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMD 314

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G   +  M  A  + + M+  G +P+V+++++LI+GYC+  ++++ + L  EM  + L P
Sbjct: 315 GHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP 374

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +  T++ LI+ LC   RL DA     ++     +P    Y  ++D  CK   + EA  ++
Sbjct: 375 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 434

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             +E     PD     I I G C  G +  A  +F+ +   G  PD  T + +I+ L + 
Sbjct: 435 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 494

Query: 556 GMPNEAFRIMQRASED 571
           G+ +EA ++ +   E+
Sbjct: 495 GLLDEASKLFREMDEN 510



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 168/311 (54%), Gaps = 1/311 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D A+  F    R+   P T  FN L+  ++++          + M SFG  P+I T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + LI+  C +N V     +L ++  K    PD  T+T++I G    GK+ +A  ++++M 
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKI-LKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P  VT+  LI+G  KVGN  +A  +   M+     P+V  ++++ID  C++ Q+ 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L  EM  K +SP+++T+  LI+ALC           L ++  + ++P    +N V+
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G V EA+ +V +M ++  +P+ VT+T L+ GHC+   M EA+ +F+ M+  GC 
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 540 PDDITVNSLIS 550
           P+ I+ N+LI+
Sbjct: 339 PNVISYNTLIN 349



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 197/425 (46%), Gaps = 2/425 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++ S+ +M  H ++  +   M S G  PN   +   ++S     +   A  +L++  
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                  T  + +L+  +  +    EA+++F +      +PD  T+  LI GL ++G   
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A      M    C P++  YNT+I  LC+  +V     L  E+  K   SPD+ TY S+
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG-ISPDIFTYNSL 242

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I   C L +      + NEM    I P  V+FN ++D   K G +  A  + ++M+  G 
Sbjct: 243 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+VVT+++L+DG+C   ++++ +K+ D M  K   PNV ++  LIN  CK  R++ A  
Sbjct: 303 EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 362

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++   +L+P    Y+ +I G C    + +A  +  EM      P+ VT+ IL+   C
Sbjct: 363 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 422

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
               + EA+++   +      PD    N  I  + + G   EA R +      + LQ   
Sbjct: 423 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG-ELEAARDLFSNLSSKGLQPDV 481

Query: 579 WKKAV 583
           W  ++
Sbjct: 482 WTYSI 486



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 178/385 (46%), Gaps = 37/385 (9%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ST  +N LL ++ K  +    + +  +       P+ +T +ILI     +  V  AF   
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVL 119

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G  PD  T+ TLI G+    ++     L  ++     F PDVVTY ++I+G CK
Sbjct: 120 AKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKM-IGEGFRPDVVTYGTLINGLCK 178

Query: 345 LG-----------------------------------KMDKATGIYNEMNSCGIKPSAVT 369
           +G                                   ++ +A  +++EM + GI P   T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N LI     +        +   M+    +PDVV+F++++D  C+ G++ +   + D+M 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            + + PNV T+T L++  C  + +++A +    +     +P    YN +I+G+CK   +D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  +  EM  +   PD VT++ LI G C   R+ +AI++F++M+     P+ +T   L+
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNL 574
             L K     EA  ++ +A E  NL
Sbjct: 419 DYLCKNRYLAEAMALL-KAIEGSNL 442



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 4/245 (1%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P  V +  +++   K+        + ++M+S GI P+  T ++LI+ F  +  +  A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++L  G+ PD  TF++LI G    G++ + L L D+M G+   P+V T+  LIN LCK
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               + A R L  +   +  P  F YN +ID  CK   V EA  + +EM  K   PD  T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF----RIM 565
           +  LI   C         ++ N+M+     PD ++ N+++  L K G   EA     +++
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 566 QRASE 570
           QR  E
Sbjct: 299 QRGVE 303



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 144/305 (47%), Gaps = 1/305 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N V+ +LC+ G       V D M   G  PN       +       + D A  +    
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+L+N   K    D+A+Y+F E  R    PDT T++ LI GL  +  +
Sbjct: 333 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 392

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A   F++M +    P++VTY  L+  LC+   +A    LLK ++  S   PD+     
Sbjct: 393 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE-GSNLDPDIQVNNI 451

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I G C+ G+++ A  +++ ++S G++P   T++++I+G  + G +  A  +   M   G
Sbjct: 452 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +   ++++  G+ RN + ++ ++L  EM  +  S +  T T+ +  L  +      +
Sbjct: 512 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLK 571

Query: 458 RFLKQ 462
           + L++
Sbjct: 572 QILRE 576



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 97/205 (47%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A   +N M      PS V FN L+    K+ +  +   +  +M SFG  P++ T   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+ +C   ++     +  ++      P+  TFT LI  +  E ++ +A     ++    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    Y  +I+G CK GN   A  ++  M +K C+P+   +  +I   C   ++ EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 528 SIFNKMLRIGCAPDDITVNSLISCL 552
           ++F++M+  G +PD  T NSLI  L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHAL 246



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 77/173 (44%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RML     P  V F+ L+    +    +  L L  +M    + PN+YT  ILIN+ C  N
Sbjct: 51  RMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+  A   L ++      P    +  +I G    G + EA  +  +M  +  +PD VT+ 
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYG 170

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            LI G C  G    AI +   M++  C P+    N++I  L K     EAF +
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 215/402 (53%), Gaps = 4/402 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN+++RSLC  G  D    +FD +R  G  P+       +S  ++  + D A  LL
Sbjct: 158 NLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLL 217

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSR 273
            +    EV      YN+LL    +    ++A+ ++++  R   + P+  T+N+++ GL +
Sbjct: 218 DEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCK 277

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G  K+A + +  M +    PD++TY T+I GLCR  +V     +  E+  K+   PDVV
Sbjct: 278 LGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEM-IKTGLVPDVV 336

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y S++ G+C  G++ +A   ++ M+  GI+ +  ++N+++ G    G +  A  + E +
Sbjct: 337 IYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELL 395

Query: 394 LSFGYL-PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
                L PD+VTFS++I G C  G  N+ L++ +E +      + ++++ +I+ LCK+ R
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L+DA +  +++  +   P   +YN +I+GFC+A    +A  + ++M E  C P  +T+  
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           LI G C   + +EA     +ML  GC  D  T  SLI  L +
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCR 557



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 202/400 (50%), Gaps = 4/400 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN+++  LC++G+      V++ M ++ H P+       +    R+   D+A  + 
Sbjct: 264 NLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVY 323

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +     +YNSLL          EA + F +   +    +  ++NI+++GL   
Sbjct: 324 SEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA-WKFWDSMSVSGIRNVTSYNIMLKGLFDG 382

Query: 275 GEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           G V KA + +  +      SPD+VT++T+I GLC      +  ++L+E +   +   D  
Sbjct: 383 GMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGK-ELDEF 441

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y+S+ISG CK G++D A  +Y +++    KP++  +N LI+GF +      A  +  +M
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                 P  +T+++LI G C+  +  +  +   EM  K    +V T+  LI  LC++ ++
Sbjct: 502 AENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKI 561

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTI 512
           + A     Q+    L     M+N +I G C AG VDEA+ +++EM+EK  C P+ VT+  
Sbjct: 562 DGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT 621

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           L+ G    G   +A S++  +L  G  PD I+ N+ I  L
Sbjct: 622 LMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGL 661



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 173/377 (45%), Gaps = 35/377 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN +L +L  + + D AV +F         PD  T++ L+ G  +   +  A     +M 
Sbjct: 162 YNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMP 221

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           S+   PD V YN L+ G  R  E  +   + +++      SP++ TY  ++ G CKLG  
Sbjct: 222 SYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMF 281

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  ++  M +   +P  +T+  +I G  +  ++ SA  +   M+  G +PDVV ++SL
Sbjct: 282 KEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSL 341

Query: 409 IDGYCRNGQLNQGLKLCDEM-----------------------------------KGKNL 433
           + G+C  G++ +  K  D M                                   K  +L
Sbjct: 342 LKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSL 401

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           SP++ TF+ +I+ LC++   N + + L++ + +      F Y+ +I G CK G +D+A  
Sbjct: 402 SPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVK 461

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  ++     KP+   +  LI G C   +  +AI ++++M    C+P  IT N+LI  L 
Sbjct: 462 LYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLC 521

Query: 554 KGGMPNEAFRIMQRASE 570
           K     EA R  +   E
Sbjct: 522 KAEKYLEASRFTREMLE 538



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 179/349 (51%), Gaps = 8/349 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEY----FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +N+LL+A V+     +A   F       F     P+  T+NI+++ L   G++ +A   F
Sbjct: 123 HNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLF 182

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G +PD +TY+TL+SG  + N +     LL E+    E  PD V Y +++ G  +
Sbjct: 183 DSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMP-SYEVQPDAVCYNALLGGCFR 241

Query: 345 LGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
            G+ +KA  ++ ++    G  P+  T+NV++DG  K+G    A  + ERM++  + PD++
Sbjct: 242 NGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMI 301

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+ ++I G CR+  ++   ++  EM    L P+V  +  L+   C   R+ +A +F   +
Sbjct: 302 TYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSM 361

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILIIGHCMKGR 522
             +  +     YN ++ G    G VD+A  +   +E +    PD VTF+ +I G C KG 
Sbjct: 362 SVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGF 420

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +++ I  +    G   D+ + +S+IS L K G  ++A ++ ++ S D
Sbjct: 421 ANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMD 469



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 156/314 (49%), Gaps = 6/314 (1%)

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHEL---LKE 321
           +++   SR      A   F  + SF GC+P + ++N L+    R    +        L  
Sbjct: 89  VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSH 148

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
             F    +P++ TY  ++   C  G +D+A  +++ +   G+ P  +T++ L+ GF K  
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTF 440
            + +A Y+ + M S+   PD V +++L+ G  RNG+  + +++ +++ +    SPN+ T+
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            ++++ LCK     +A    +++  N+  P    Y  +I G C++ +VD A  + +EM +
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
               PD V +  L+ G C  GR+ EA   ++ M  +    +  + N ++  L  GGM ++
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSM-SVSGIRNVTSYNIMLKGLFDGGMVDK 387

Query: 561 AFRIMQRASEDQNL 574
           A  + +   +D +L
Sbjct: 388 ATDLWELLEKDDSL 401



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 151/302 (50%), Gaps = 6/302 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           SL+    T++ ++  LCE G  +    + +  R+ G   +       +S   + G+ D A
Sbjct: 400 SLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDA 459

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +        ++ +YN+L+N   + +   +A+ ++ +       P T T+N LI G
Sbjct: 460 VKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHG 519

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L +  +  +A  F  +M   GC  D+ TY +LI GLCR  ++     L  ++  K     
Sbjct: 520 LCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG-LQT 578

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEM---NSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           DVV +  +I G C  GK+D+A+ + +EM   N+C   P+ VT+N L+DGF + G    A 
Sbjct: 579 DVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCC--PNVVTYNTLMDGFYETGCFDKAA 636

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   +L  G +PD++++++ I G C   +  +G++L +EM    + P   T+ IL+ A+
Sbjct: 637 SLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAV 696

Query: 448 CK 449
            K
Sbjct: 697 IK 698



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 167/354 (47%), Gaps = 3/354 (0%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIE 195
           ++G  +  +  +++S   +  +YN++++ L + G+ D    +++ +  D  L P+     
Sbjct: 350 RVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFS 409

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +      G  + +  +L + R     +  F Y+S+++ L K    D+AV ++++    
Sbjct: 410 TMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMD 469

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +P++  +N LI G  +  +   A   +  M    CSP  +TYNTLI GLC+  +    
Sbjct: 470 SFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEA 529

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
               +E+  K     DV TY S+I G C+  K+D A  ++N++   G++   V  N+LI 
Sbjct: 530 SRFTREMLEKGCML-DVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIH 588

Query: 376 GFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           G    G +  A  +   M       P+VVT+++L+DG+   G  ++   L   +    L 
Sbjct: 589 GLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLV 648

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           P++ ++   I  LC  NR  +  + L ++  + ++P    +N ++    K G +
Sbjct: 649 PDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 1/280 (0%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           L+ LE +R +      F +Y+ ++  LC+ G  D    +++ +  D   PNS +    ++
Sbjct: 425 LQILEEARTSGKELDEF-SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALIN 483

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
              +A K   A  + SQ    + + +T  YN+L++ L K     EA    +E        
Sbjct: 484 GFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCML 543

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  T+  LI+GL R  ++  A   +  +   G   D+V +N LI GLC   +V    +LL
Sbjct: 544 DVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLL 603

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+K K+   P+VVTY +++ G+ + G  DKA  ++  +   G+ P  +++N  I G   
Sbjct: 604 SEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCS 663

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                    +   ML+ G +P  +T++ L+    + G + 
Sbjct: 664 CNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 205/410 (50%), Gaps = 3/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L +         + + + ++G  P        ++   + G+ + A  LL + 
Sbjct: 36  TYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 95

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T     Y SL++ L K+  + EA  +FKE        DT  +  LI+GL + G++
Sbjct: 96  VDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKI 155

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   +  M S GC PD+VT +T+I GLC+   +     + K ++ +   +P+ V Y++
Sbjct: 156 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG-LAPNEVVYSA 214

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  KMD A  +  +M      P  +T+N+LIDG  K G++ +A    + ML  G
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV T++ LI G+C+ G  +    + D+M     SPNV T+  LI+ LCK  +L  A 
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS 334

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            + + +K     P  F+Y+ ++DG CK+G ++   ++  EME       + T T LI   
Sbjct: 335 LYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHL 393

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   R+ EA+S+FN + + G  P     NS+IS L+K G  NE   + Q 
Sbjct: 394 CKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQE 442



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 187/361 (51%), Gaps = 1/361 (0%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             ++  ++AG    A  L  +      T+    Y ++++ L K     EAV + ++    
Sbjct: 4   ILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITAN 63

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P   T+N L+ GL ++G +++A +    +   GC+PD+VTY +LI GL +       
Sbjct: 64  GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEA 123

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           ++L KE+  +   + D V YT++I G  + GK+ +A+ +Y  M S G  P  VT + +ID
Sbjct: 124 YKLFKEMASRG-LALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 182

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  K G + +A  + + M + G  P+ V +S+LI G C+  +++  L++  +MK    +P
Sbjct: 183 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 242

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +  T+ ILI+ LCK   +  AR F  ++      P  + YN +I GFCKAGN D A  + 
Sbjct: 243 DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVF 302

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M   RC P+ VT+  LI G C + ++ +A   +  M   GC PD    +SL+  L K 
Sbjct: 303 DDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKS 362

Query: 556 G 556
           G
Sbjct: 363 G 363



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 178/326 (54%), Gaps = 1/326 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           ++ L+N LVK     +A  + +E        D  T+  ++  L++  ++++A      + 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + GC+P I TYN L++GLC++  +    +LL+++   +  +PDVVTYTS+I G  K  + 
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI-VDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  ++ EM S G+    V +  LI G  + G +  A  + + M S G +PDVVT S++
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG C+ G++   +++   M+ + L+PN   ++ LI+ LCK  +++ A   L Q+K    
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +IDG CK+G+V  A     EM E  CKPD  T+ ILI G C  G    A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLK 554
           +F+ M    C+P+ +T  +LIS L K
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCK 326



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 162/299 (54%), Gaps = 1/299 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           TF+ILI GL + G + +A     +  + GC+ DI TY T++  L +  ++     L++++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
              +  +P + TY ++++G CK+G++++A  +  ++   G  P  VT+  LIDG GK   
Sbjct: 61  T-ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
              A  + + M S G   D V +++LI G  + G++ Q   +   M  +   P+V T + 
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I+ LCK  R+  A R  K ++   L P   +Y+ +I G CKA  +D A  ++A+M++  
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C PD +T+ ILI G C  G +  A + F++ML  GC PD  T N LIS   K G  + A
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 298



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 169/379 (44%), Gaps = 38/379 (10%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN ++  LC+MG  +    +   +  +G  P+       +    +  +   A  L 
Sbjct: 68  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF 127

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     + + T  Y +L+  L++     +A  ++K        PD  T + +I GL + 
Sbjct: 128 KEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187

Query: 275 GEVKKAFEFFYDMGSFG-----------------------------------CSPDIVTY 299
           G +  A   F  M + G                                   C+PD +TY
Sbjct: 188 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 247

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N LI GLC+  +VA       E+  ++   PDV TY  +ISG+CK G  D A G++++M+
Sbjct: 248 NILIDGLCKSGDVAAARAFFDEM-LEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMS 306

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           S    P+ VT+  LI G  K   +  A    + M   G  PD   +SSL+DG C++G+L 
Sbjct: 307 SSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLE 366

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            G  L DEM+   ++ N  T T LI  LCK NR+++A      ++   + P P+ YN +I
Sbjct: 367 GGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 424

Query: 480 DGFCKAGNVDEANVIVAEM 498
               K+G V+E   +  EM
Sbjct: 425 SALIKSGKVNEGQAVYQEM 443


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 206/398 (51%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  +C  G       +   M       +       + S  R G  DAA  L  + 
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   YNSL+  L K    ++   + K+       P+  TFN+L+    + G++
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E + +M + G SP+I+TYNTL+ G C  N ++  + +L ++  +++ SPD+VT+TS
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVTFTS 373

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC + ++D    ++  ++  G+  +AVT+++L+ GF + G +  AE + + M+S G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV+T+  L+DG C NG+L + L++ ++++   +   +  +T +I  +CK  ++ DA 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    Y  +I G CK G++ EAN+++ +MEE    P+  T+  LI  H
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
              G +  +  +  +M   G + D  ++  +I  LL  
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 199/394 (50%), Gaps = 1/394 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D    +F  M     LP+      F S+  R  + +       Q     +  + +  N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           +N   +      A  +  +  +L  +PDT TFN LI+GL   G+V +A      M   GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PD+VTYN++++G+CR  + +   +LL++++ ++    DV TY+++I   C+ G +D A 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN-VKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ EM + GIK S VT+N L+ G  K G       + + M+S   +P+V+TF+ L+D +
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            + G+L +  +L  EM  + +SPN+ T+  L++  C +NRL++A   L  +  N   P  
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             +  +I G+C    VD+   +   + ++    + VT++IL+ G C  G++  A  +F +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           M+  G  PD +T   L+  L   G   +A  I +
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 218/444 (49%), Gaps = 2/444 (0%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           I R     L L F +   +N  + H+  T N+++   C          V   +   G+ P
Sbjct: 98  IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++      +      GK   A  L+ +            YNS++N + +  +   A+ + 
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           ++      + D +T++ +I  L R G +  A   F +M + G    +VTYN+L+ GLC+ 
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            +   G  LLK++    E  P+V+T+  ++  + K GK+ +A  +Y EM + GI P+ +T
Sbjct: 277 GKWNDGALLLKDM-VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N L+DG+     +  A  M + M+     PD+VTF+SLI GYC   +++ G+K+   + 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            + L  N  T++IL+   C+  ++  A    +++  + ++P    Y  ++DG C  G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  I  ++++ +     V +T +I G C  G++ +A ++F  +   G  P+ +T   +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 550 SCLLKGGMPNEAFRIMQRASEDQN 573
           S L K G  +EA  ++++  ED N
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGN 539



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 199/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +++ L   G      V+ D M  +G  P+       V+   R+G    A  LL + 
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F Y++++++L +    D A+ +FKE      +    T+N L++GL + G+ 
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                   DM S    P+++T+N L+    +  ++   +EL KE+  +   SP+++TY +
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNT 338

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC   ++ +A  + + M      P  VTF  LI G+  V  +     +   +   G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + VT+S L+ G+C++G++    +L  EM    + P+V T+ IL++ LC   +L  A 
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + L+ + +     MY  +I+G CK G V++A  +   +  K  KP+ +T+T++I G 
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C KG + EA  +  KM   G AP+D T N+LI   L+ G
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 79/152 (51%)

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           +  + L  EM      P++  F+   +A+ +  + N    F KQL+ N +    +  N +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I+ FC+      A  ++ ++ +   +PD  TF  LI G  ++G++ EA+ + ++M+  GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            PD +T NS+++ + + G  + A  ++++  E
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 214/417 (51%), Gaps = 8/417 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +T+N V+  LC+    +    + + M   G  P+     + ++   + G+ DAAK L  +
Sbjct: 282 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYR 341

Query: 217 F-RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRI 274
             +P  V     ++N+L++  V     D+A  +  +    Y   PD  T+N LI G  + 
Sbjct: 342 IPKPTSV-----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKK 396

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E   DM + GC P++ +Y  L+ G C++ ++   + LL E+       P+ V 
Sbjct: 397 GLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS-ADGLKPNTVG 455

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +  +IS +CK  ++ +A  I+ EM   G KP   TFN LI G  +V  +  A ++   M+
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G + + VT+++LI+ + R G++ +  KL +EM  +    +  T+  LI  LC+   ++
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVD 575

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            AR   +++  + LVP     N +I+G C++G V+EA     EM  +   PD VTF  LI
Sbjct: 576 KARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 635

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G C  GR+ + +++F K+   G  PD +T N+L+S L KGG   +A  ++    ED
Sbjct: 636 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIED 692



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 199/404 (49%), Gaps = 4/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +VM++LC +   DS   V   M   G +PNS + +  + S  +  + + A  LL + 
Sbjct: 213 TFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 272

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +N ++  L K +  +EA  M          PD  T+  L+ GL +IG V
Sbjct: 273 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRV 332

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + FY +      P  V +NTLI G      +     +L ++       PDV TY S
Sbjct: 333 DAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 388

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY K G +  A  +  +M + G KP+  ++ +L+DGF K+G +  A  +   M + G
Sbjct: 389 LIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADG 448

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V F+ LI  +C+  ++ + +++  EM  K   P+VYTF  LI+ LC+ + +  A 
Sbjct: 449 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 508

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +    +V     YN +I+ F + G + EA  +V EM  +    D++T+  LI G 
Sbjct: 509 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGL 568

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C  G + +A S+F KMLR G  P  I+ N LI+ L + GM  EA
Sbjct: 569 CRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 206/406 (50%), Gaps = 10/406 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +M  LC++G  D+ + +F  +      P S +    +   +  G+ D AK +LS  
Sbjct: 318 TYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDM 373

Query: 218 RPGE-VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +      YNSL+    K+     A+ + ++      +P+ +++ IL+ G  ++G+
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A+    +M + G  P+ V +N LIS  C+ + +    E+ +E+  K    PDV T+ 
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYTFN 492

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+ISG C++ ++  A  +  +M S G+  + VT+N LI+ F + G +  A  +   M+  
Sbjct: 493 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 552

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G L D +T++SLI G CR G++++   L ++M    L P+  +  ILIN LC+   + +A
Sbjct: 553 GSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             F K++      P    +N +I+G C+AG +++   +  +++ +   PD VT+  L+  
Sbjct: 613 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSW 672

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            C  G + +A  + ++ +  G  P+D T     S LL+  +P E  
Sbjct: 673 LCKGGFVYDACLLLDEGIEDGFVPNDRT----WSILLQSLVPQETL 714



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 156/337 (46%), Gaps = 37/337 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + GL      V   MR+ G  PN       V    + GK D A  LL++ 
Sbjct: 385 TYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM 444

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +T  +N L++A  K++   EAV +F+E  R   +PD +TFN LI GL  + E+
Sbjct: 445 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 504

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A     DM S G   + VTYNTLI+   R  E+    +L+ E+ F+     D +TY S
Sbjct: 505 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLL-DEITYNS 563

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSA------------------------------ 367
           +I G C+ G++DKA  ++ +M   G+ PS+                              
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623

Query: 368 -----VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                VTFN LI+G  + G +     M  ++ + G  PD VT+++L+   C+ G +    
Sbjct: 624 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC 683

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            L DE       PN  T++IL+ +L  +  L D R F
Sbjct: 684 LLLDEGIEDGFVPNDRTWSILLQSLVPQETL-DRRTF 719



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 18/289 (6%)

Query: 290 FGCSPDIVTYNT----LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           + C P   +YN     L+SG C        +++L       +  P + T+  V+   C +
Sbjct: 170 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-----KIPPTLFTFGVVMKALCAV 224

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            ++D A  +  +M   G  P++V +  LI    K   +  A  + E M   G +PD  TF
Sbjct: 225 NEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 284

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           + +I G C+  ++N+  K+ + M  +  +P+  T+  L+N LCK  R++ A+    +   
Sbjct: 285 NDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYR--- 341

Query: 466 NDLVPKP--FMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMKGR 522
              +PKP   ++N +I GF   G +D+A  ++++M       PD  T+  LI G+  KG 
Sbjct: 342 ---IPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +  A+ +   M   GC P+  +   L+    K G  +EA+ ++   S D
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD 447



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 38/174 (21%)

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           KG   S +VY   +LI  L          R L Q+K   +V K  ++  ++  + KAG  
Sbjct: 99  KGYRHSFDVYQ--VLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFP 156

Query: 489 DEANVIVAEMEE-KRCKPD----KVTFTILIIGHCMK----------------------- 520
            +   ++ EM     C+P      V   IL+ G+C K                       
Sbjct: 157 GQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 216

Query: 521 --------GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
                     +  A+S+   M + GC P+ +   +LI  L K    NEA ++++
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 270


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 232/473 (49%), Gaps = 19/473 (4%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE-MGLHDSV 175
           L   LS    L+ ++ +  P   L F  +        H+ ++Y L++  L     L+ + 
Sbjct: 89  LAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAAR 147

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
             VF   +  G      + + F +S IR    AG    +  +    +   V+ S   +NS
Sbjct: 148 NFVFSIEKKSGGAVK--LGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNS 205

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           LL+ ++K+     A  +F E    Y   PDT+TFNILI+G      V + F FF +M  F
Sbjct: 206 LLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRF 265

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            C PD+VTYNTL+ GLCR  +V   H ++K  VK     SP+VVTYT++I GYC    M 
Sbjct: 266 KCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMA 325

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS-FGYLPDVVTFSSL 408
           +A  +  EM S G+KP+ +T+N LI G  +   +   + + E M+   G++PD  T ++L
Sbjct: 326 EALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTL 385

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL-----KQL 463
           I  +C  G+L +   + ++M    + P+  T+++L+ +LC+      A  F      K++
Sbjct: 386 IKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEI 445

Query: 464 KWNDLVPKPFM--YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
             +D+  KP +  YNP+ +  C  G   +A  +  ++  KR   D  ++  LI+GHC +G
Sbjct: 446 LLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLM-KRGTQDPPSYKTLILGHCREG 504

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
                  +   MLR    PD  T   +I  LLK G P  A + +++  +  +L
Sbjct: 505 TPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL 557



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 160/334 (47%), Gaps = 18/334 (5%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN LI+     G  +++ + F  M   G SP +VT+N+L+S + +    +   +L  E+ 
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                +PD  T+  +I G+C    +D+    + EM+     P  VT+N L+DG  + G +
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 384 VSAEYMRERML--SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
             A  + + M+  S    P+VVT+++LI GYC    + + L L  EM  + L PN  T+ 
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347

Query: 442 ILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            LI  LC+  +L+  +  L+ +  +   +P     N +I   C  G ++EA  +  +M E
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSE 407

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR-------IGCAPDDITVNSLISCLL 553
            R +PD  T+++L+   C +G    A   F+++         +GC P     N +   L 
Sbjct: 408 LRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC 467

Query: 554 KGGMPNEAFRI----MQRASEDQNLQLPSWKKAV 583
             G   +A R+    M+R ++D     PS+K  +
Sbjct: 468 SNGKTKKAERVFRQLMKRGTQDP----PSYKTLI 497



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 204/489 (41%), Gaps = 83/489 (16%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++RS    GL      VF  M+  G  P+       +S  ++ G+   AK L  +  
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 219 PG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT  T+ +N L+      +  DE  + FKE  R    PD  T+N L+ GL R G+V
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 278 K-------------------------------------KAFEFFYDMGSFGCSPDIVTYN 300
           K                                     +A     +M S G  P+ +TYN
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           TLI GLC   ++ +  E+L+ +     F PD  T  ++I  +C +GK+++A  ++ +M+ 
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSE 407

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYM------RERMLS--------------FGYL- 399
             ++P + T++VL+    + G+   AE        +E +L               F YL 
Sbjct: 408 LRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC 467

Query: 400 --------------------PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
                                D  ++ +LI G+CR G    G  L   M  ++  P+  T
Sbjct: 468 SNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAET 527

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + ++I+ L K+     A + L+++  +  +P   +++ ++    + G   E+  +V  M 
Sbjct: 528 YGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLML 587

Query: 500 EKRCKP--DKVTFTI--LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           E+R +   D  T T+  L+   C   +++EA  +    L    + D    +++IS L K 
Sbjct: 588 ERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKA 647

Query: 556 GMPNEAFRI 564
              +EAF +
Sbjct: 648 HKVSEAFAL 656



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 169/392 (43%), Gaps = 22/392 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS-Q 216
           TY  ++R  C          +   M S G  PN       +     A K D  K +L   
Sbjct: 310 TYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM 369

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G     T   N+L+ A       +EA  +F++   L  QPD+ T+++L++ L + G+
Sbjct: 370 VGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGD 429

Query: 277 VKKAFEFFYDMGS-------FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            ++A EFF ++          GC P +  YN +   LC   +  +   + +++  +    
Sbjct: 430 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQD 489

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P   +Y ++I G+C+ G  +    +   M      P A T+ ++IDG  K G+ V A   
Sbjct: 490 PP--SYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKS 547

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV----YTFTILIN 445
            E+ML   +LP    F S++      G  ++   L   M  + +  N+    +T   L++
Sbjct: 548 LEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVS 607

Query: 446 ALCKENRLNDARRF----LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LC+  +L +A++     L++ +  D+     M + VI G CKA  V EA  +  E+ EK
Sbjct: 608 FLCQSRKLLEAQKMLLFSLEKRQSVDID----MCSTVISGLCKAHKVSEAFALYYELVEK 663

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
             +        L I    +GR+ EA  +  KM
Sbjct: 664 GMQHRLTCQEDLRISLEAEGRLNEAKFVSKKM 695


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 205/415 (49%), Gaps = 8/415 (1%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           +L++R L + G  +    V   M     L    ++   + S  ++   D A+    + + 
Sbjct: 35  DLLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKD 94

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
               ++T  YN L+NA  K    DEA+ +F E       P T T+N LI GL R+  + +
Sbjct: 95  FRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGE 154

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT---YT 336
           A +F+  + S G     +TYN L+ G C+ + V    ELL E+  +      VVT   Y 
Sbjct: 155 AQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARG----GVVTSAPYN 210

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I    K GK+ +A   +N M   G++P  VTF VLIDG  K   +  A+ +    L  
Sbjct: 211 CIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLES 270

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P VV  S L+DG+C+ G +++  ++ + M  +  +PN  +  ILIN LCK  RL+ A
Sbjct: 271 GGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQA 330

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R   +++      P    Y+  +DG C+A  VD+A  ++  + +K   PD V +T LI G
Sbjct: 331 REVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISG 390

Query: 517 HCMKGRMVEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            C  GR+ EA  +F   +R  GCAP++ T N L++     G  +EA  + QR  E
Sbjct: 391 LCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVE 445



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 176/357 (49%), Gaps = 2/357 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++ + C+    D    +F  M++ G  P++      +    R  +   A+    + 
Sbjct: 103 SYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERL 162

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YN L++   K +   EAV +  E         +  +N +I  L + G++
Sbjct: 163 LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKI 222

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A  FF  M   G  P  VT+  LI GLC+ N VAR  E+      +S  SP VV  + 
Sbjct: 223 HEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSY-LESGGSPSVVICSC 281

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+CK G +D+A  I+  M + G  P+ V+ N+LI+G  K   +  A  + E ++   
Sbjct: 282 LMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQ 341

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+S+ +DG CR  +++Q  ++   +  K  +P+V  +T LI+ LC   RL++AR
Sbjct: 342 AKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEAR 401

Query: 458 R-FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + F   ++     P  F  N +++GF  AG +DEA  +     E+  +PD  TF+ +
Sbjct: 402 KVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 163/331 (49%), Gaps = 6/331 (1%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           DEA+ +F     L S       ++L++ LS+ G  ++  +    M       +    N  
Sbjct: 16  DEALELFHS---LVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNIT 72

Query: 303 ISGLCRVNEVARGHELLKEVK-FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           I  LC+ + + +     +E+K F+     + V+Y  +I+ +CK  ++D+A  ++ EM + 
Sbjct: 73  IDSLCKSDMIDKAESWFQELKDFRGLV--NTVSYNILINAFCKTKRIDEAIQLFGEMKAP 130

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G  PS  T+N LI G  +V  +  A+   ER+LS G     +T++ L+DG+C+  ++ + 
Sbjct: 131 GCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEA 190

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           ++L +E+  +        +  +I+ L K+ ++++A  F  +++ + + P+   +  +IDG
Sbjct: 191 VELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDG 250

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CKA  V  A  I     E    P  V  + L+ G C  G + EA  IF  M   GC P+
Sbjct: 251 LCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPN 310

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           D++ N LI+ L K    ++A  + +   + Q
Sbjct: 311 DVSCNILINGLCKAKRLSQAREVFEEVVKRQ 341



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 12/341 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++  LC +      Q  ++ + S G   +       V    +A +   A  LL
Sbjct: 135 STSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELL 194

Query: 215 SQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           ++   R G VT +   YN +++ L K+    EA   F    +   +P   TF +LI GL 
Sbjct: 195 NELVARGGVVTSAP--YNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLC 252

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFS 329
           +   V +A E F+     G SP +V  + L+ G C+   V+E  R  EL+         +
Sbjct: 253 KANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMT----NRGCT 308

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+ V+   +I+G CK  ++ +A  ++ E+     KP  VT++  +DG  +   +  A  +
Sbjct: 309 PNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQV 368

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD-EMKGKNLSPNVYTFTILINALC 448
              ++  G  PDVV +++LI G C  G+L++  K+ + +M+    +PN +T  +L+N   
Sbjct: 369 LCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFG 428

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              RL++AR   ++     + P    ++ + +   K    D
Sbjct: 429 LAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAKTEGWD 469


>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 232/473 (49%), Gaps = 19/473 (4%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE-MGLHDSV 175
           L   LS    L+ ++ +  P   L F  +        H+ ++Y L++  L     L+ + 
Sbjct: 89  LAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAAR 147

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
             VF   +  G      + + F +S IR    AG    +  +    +   V+ S   +NS
Sbjct: 148 NFVFSIEKKSGGAVK--LGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNS 205

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           LL+ ++K+     A  +F E    Y   PDT+TFNILI+G      V + F FF +M  F
Sbjct: 206 LLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRF 265

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            C PD+VTYNTL+ GLCR  +V   H ++K  VK     SP+VVTYT++I GYC    M 
Sbjct: 266 KCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMA 325

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS-FGYLPDVVTFSSL 408
           +A  +  EM S G+KP+ +T+N LI G  +   +   + + E M+   G++PD  T ++L
Sbjct: 326 EALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTL 385

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL-----KQL 463
           I  +C  G+L +   + ++M    + P+  T+++L+ +LC+      A  F      K++
Sbjct: 386 IKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEI 445

Query: 464 KWNDLVPKPFM--YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
             +D+  KP +  YNP+ +  C  G   +A  +  ++  KR   D  ++  LI+GHC +G
Sbjct: 446 LLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLM-KRGTQDPPSYKTLILGHCREG 504

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
                  +   MLR    PD  T   +I  LLK G P  A + +++  +  +L
Sbjct: 505 TPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL 557



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 160/334 (47%), Gaps = 18/334 (5%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN LI+     G  +++ + F  M   G SP +VT+N+L+S + +    +   +L  E+ 
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                +PD  T+  +I G+C    +D+    + EM+     P  VT+N L+DG  + G +
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 384 VSAEYMRERML--SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
             A  + + M+  S    P+VVT+++LI GYC    + + L L  EM  + L PN  T+ 
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347

Query: 442 ILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            LI  LC+  +L+  +  L+ +  +   +P     N +I   C  G ++EA  +  +M E
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSE 407

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR-------IGCAPDDITVNSLISCLL 553
            R +PD  T+++L+   C +G    A   F+++         +GC P     N +   L 
Sbjct: 408 LRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC 467

Query: 554 KGGMPNEAFRI----MQRASEDQNLQLPSWKKAV 583
             G   +A R+    M+R ++D     PS+K  +
Sbjct: 468 SNGKTKKAERVFRQLMKRGTQDP----PSYKTLI 497



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 187/450 (41%), Gaps = 48/450 (10%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++RS    GL      VF  M+  G  P+       +S  ++ G+   AK L  +  
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 219 PG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT  T+ +N L+      +  DE  + FKE  R    PD  T+N L+ GL R G+V
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 278 K-------------------------------------KAFEFFYDMGSFGCSPDIVTYN 300
           K                                     +A     +M S G  P+ +TYN
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYN 347

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           TLI GLC   ++ +  E+L+ +     F PD  T  ++I  +C +GK+++A  ++ +M+ 
Sbjct: 348 TLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSE 407

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYM------RERML-SFGYLPDVVTFSSLIDGYC 413
             ++P + T++VL+    + G+   AE        +E +L   G  P V  ++ + +  C
Sbjct: 408 LRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLC 467

Query: 414 RNGQLNQGLKLCDE-MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            NG+  +  ++  + MK     P  Y   IL +  C+E         L  +   D VP  
Sbjct: 468 SNGKTKKAERVFRQLMKRGTQDPPSYKTLILGH--CREGTPEAGFDLLVLMLRRDFVPDA 525

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             Y  +IDG  K G+   A+  + +M +    P    F  ++     KG   E+ S+   
Sbjct: 526 ETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKL 585

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           ML      +       +  L K G+ ++AF
Sbjct: 586 MLERRIRQNIDLSTHTVRLLYKSGLQDKAF 615



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 172/421 (40%), Gaps = 13/421 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS-Q 216
           TY  ++R  C          +   M S G  PN       +     A K D  K +L   
Sbjct: 310 TYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM 369

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G     T   N+L+ A       +EA  +F++   L  QPD+ T+++L++ L + G+
Sbjct: 370 VGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGD 429

Query: 277 VKKAFEFFYDMGS-------FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            ++A EFF ++          GC P +  YN +   LC   +  +   + +++  +    
Sbjct: 430 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQD 489

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P   +Y ++I G+C+ G  +    +   M      P A T+ ++IDG  K G+ V A   
Sbjct: 490 PP--SYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKS 547

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E+ML   +LP    F S++      G  ++   L   M  + +  N+   T  +  L K
Sbjct: 548 LEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYK 607

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               + A   +  L  N  + K      ++   C++  + EA  ++    EKR   D   
Sbjct: 608 SGLQDKAFMTIGLLYENGYLVK---MEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDM 664

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            + +I G C   ++ EA +++ +++  G          L   L   G  NEA  + ++  
Sbjct: 665 CSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSKKMP 724

Query: 570 E 570
           E
Sbjct: 725 E 725


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 204/408 (50%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+R+LC  G       V D M   G  P  PM    + +  R G   +A  +L   
Sbjct: 124 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +     N +LNA+  Q + D+A+++ ++      +PD  ++N +++GL      
Sbjct: 184 HARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRW 243

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               E   +M    C P+IVT+NTLIS LCR     R HE+L ++  +   +PD+  Y +
Sbjct: 244 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMA-EHGCTPDIRMYAT 302

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G +  A  I N M S G+KP+ V +N L+ G          E +   M    
Sbjct: 303 IIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D VTF+ L+D +C+NG +++ ++L ++M      P+V T+T +IN  CKE  +++A 
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAV 422

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK +      P    Y  V+ G C A    +A  ++++M ++ C  + +TF  LI   
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C KG + +AI +  +ML  GC+PD I+ +++I  L K G  +EA  ++
Sbjct: 483 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 530



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 185/390 (47%), Gaps = 1/390 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V ++   +  T+N ++  LC  GL + V  V   M   G  P+  M    +    + G  
Sbjct: 254 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHL 313

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  +L++     +  +   YN+LL  L      +E   +  E F      D  TFNIL
Sbjct: 314 KVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +    + G V +  E    M   GC PD++TY T+I+G C+   +     LLK +     
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT-ACG 432

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ ++YT V+ G C   +   A  + ++M   G   + +TFN LI+   K G +  A 
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + ++ML  G  PD++++S++IDG  + G+ ++ L+L + M  K +SPN   ++ + +AL
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            +E R+N   +    ++   +     +YN VI   CK G  + A   +A M    C P++
Sbjct: 553 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 612

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            T+TILI G   +G + EA  +  ++   G
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 196/406 (48%), Gaps = 39/406 (9%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            V+   RAG+ ++A+ L +      V  + + Y  ++ AL  +    +A+ +  E  R  
Sbjct: 96  MVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS----------------------- 293
             P    ++++++   R G  + A     D+ + GC+                       
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212

Query: 294 ------------PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                       PD+V+YN ++ GLC         EL++E+  +    P++VT+ ++IS 
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISY 271

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C+ G  ++   +  +M   G  P    +  +IDG  K G++  A  +  RM S+G  P+
Sbjct: 272 LCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPN 331

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VV +++L+ G C   +  +  +L  EM  K+   +  TF IL++  C+   ++     L+
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 391

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q+  +  +P    Y  VI+GFCK G +DEA +++  M    CKP+ +++TI++ G C   
Sbjct: 392 QMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 451

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           R V+A  + ++M++ GC  + IT N+LI+ L K G+  +A  ++++
Sbjct: 452 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 192/408 (47%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V++ LC       VQ + + M      PN       +S   R G  +    +L+Q 
Sbjct: 229 SYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T    MY ++++ + K+ +   A  +         +P+   +N L++GL      
Sbjct: 289 AEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 348

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++  E   +M    C  D VT+N L+   C+   V R  ELL+++       PDV+TYT+
Sbjct: 349 EETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCM-PDVITYTT 407

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M +CG KP+ +++ +++ G       V AE +  +M+  G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + +TF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K  + ++A 
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEAL 527

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +     + G +++   +   +++   + D V +  +I   
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +G    AI     M+  GC P++ T   LI  L   G   EA  ++
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 14/287 (4%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YN +++G CR  ++     L   V       P+  TY  V+   C  G++  A  + +EM
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVP----PNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G  P    ++V+++   + G   SA  + E + + G   DV   + +++  C  G +
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++ L L  ++      P+V ++  ++  LC   R    +  ++++      P    +N +
Sbjct: 209 DKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I   C+ G  +  + ++A+M E  C PD   +  +I G C +G +  A  I N+M   G 
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
            P+ +  N+L+  L             +R  E + L    + K  PL
Sbjct: 329 KPNVVCYNTLLKGLCSA----------ERWEETEELLAEMFDKDCPL 365



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 7/245 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ GL D   ++   M + G  PN+      +     A +   A+ L+SQ 
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++   +N+L+N L K+   ++A+ + K+       PD  +++ +I GL + G+ 
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 523

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
            +A E    M + G SP+ + Y+++ S L R   +N+V +  + +++   +S    D V 
Sbjct: 524 DEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRS----DAVL 579

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +VIS  CK G+ ++A      M S G  P+  T+ +LI G    G +  A+ M   + 
Sbjct: 580 YNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELC 639

Query: 395 SFGYL 399
           S G L
Sbjct: 640 SKGAL 644



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ GL +    +   M  +G  P+       +    +AGK D A  LL+  
Sbjct: 474 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +T +Y+S+ +AL ++   ++ + MF        + D   +N +I  L + GE 
Sbjct: 534 VNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET 593

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A EF   M S GC P+  TY  LI GL     V    E+L E+  K      ++ +  
Sbjct: 594 ERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFG 653

Query: 338 VI 339
           ++
Sbjct: 654 IV 655


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 200/366 (54%), Gaps = 1/366 (0%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG  + +   L +       ++   YNSL++A VK     +A+ +++   +   +PDT+T
Sbjct: 67  AGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYT 126

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN+L+    +   V   ++ F +M +  CSP+++TY+ LI  +C+   V +  ++  ++K
Sbjct: 127 FNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMK 186

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +    P++ TYTS+I G  K G +DKA  ++ EM S G+  + V +N LI G G+ G  
Sbjct: 187 SRG-CRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRA 245

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            +A  +   MLS G  PD VTF+SL+ G    G+ ++  ++  E +    + +V  + +L
Sbjct: 246 DAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK  RL++A     +L+ + LVP  + +N ++DG CK+G + +A +++ +M+   C
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGC 365

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            PD   +  LI G    GR+ EA  +  +M  +G  PD +T N+LI    KGG   +A R
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALR 425

Query: 564 IMQRAS 569
           + +  S
Sbjct: 426 LFEEIS 431



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 209/440 (47%), Gaps = 20/440 (4%)

Query: 126 SLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD 185
           S+E +KR++  +  L              +   YN ++ +  + G       V+  M   
Sbjct: 73  SVEALKRMEGHRCAL--------------TASAYNSLIDAFVKAGYTQKALAVYRVMGQS 118

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  P++      +++  +A + D+   L  + +    + +   Y+ L++A+ K    ++A
Sbjct: 119 GLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKA 178

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           + +F +      +P+ +T+  +I GL + G V KAF  F +M S G     V YN+LI G
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHG 238

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           L R        +L +E+  K    PD VT+TS++ G    G+  +A  I+ E    G   
Sbjct: 239 LGRSGRADAAAKLFREMLSKG-LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCAL 297

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
               +NVLID   K   +  A  +   +   G +PDV TF++L+DG C++G+++    L 
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            +MK    +P+V  +  LI+ L K  R+ +A + L +++     P    YN +ID  CK 
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC----APD 541
           G +++A  +  E+  K    + VT+  ++ G CM GR+ EA  +FN M +        PD
Sbjct: 418 GRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPD 476

Query: 542 DITVNSLISCLLKGGMPNEA 561
            +T  +L++   + G+   A
Sbjct: 477 FVTYTTLLNGARQAGLSELA 496



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 187/374 (50%), Gaps = 12/374 (3%)

Query: 124 LNSLEVIKRLDNP-KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM 182
           +N+ +  KR+D+  KL   F E    N S N    TY++++ ++C+ G  +    VF  M
Sbjct: 131 MNAFKKAKRVDSVWKL---FEEMQNQNCSPN--VITYSILIDAVCKCGGVEKALKVFLDM 185

Query: 183 RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
           +S G  PN       +    ++G  D A  L  +     +  +  +YNSL++ L +   A
Sbjct: 186 KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRA 245

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D A  +F+E      QPD  TF  L+ GL   G   +A   F +    GC+ D+  YN L
Sbjct: 246 DAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I  LC+   +    E+  E++ +    PDV T+ +++ G CK G++  A  +  +M   G
Sbjct: 306 IDTLCKSKRLDEAWEIFGELE-EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P    +N LIDG  K G +  A  +   M S GY PDVVT+++LID  C+ G++   L
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDAL 424

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF---LKQLKWNDLVPKPFM-YNPV 478
           +L +E+  K  + N  T+  ++N LC   R+++A +    +KQ   + ++   F+ Y  +
Sbjct: 425 RLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTL 483

Query: 479 IDGFCKAGNVDEAN 492
           ++G  +AG  + AN
Sbjct: 484 LNGARQAGLSELAN 497



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 123/238 (51%)

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y S+I  + K G   KA  +Y  M   G++P   TFNVL++ F K   + S   + E M
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            +    P+V+T+S LID  C+ G + + LK+  +MK +   PN++T+T +I+ L K   +
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A    +++    LV    +YN +I G  ++G  D A  +  EM  K  +PD VTFT L
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + G  + GR  EA  IF +   +GCA D    N LI  L K    +EA+ I     ED
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEED 328



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 119/246 (48%)

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           KS +      +  +  GY   G ++K+      M       +A  +N LID F K G   
Sbjct: 47  KSRYILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQ 106

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  +   M   G  PD  TF+ L++ + +  +++   KL +EM+ +N SPNV T++ILI
Sbjct: 107 KALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILI 166

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +A+CK   +  A +    +K     P  F Y  +IDG  K+G+VD+A  +  EM  +   
Sbjct: 167 DAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV 226

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             +V +  LI G    GR   A  +F +ML  G  PD +T  SL+  L   G  +EA RI
Sbjct: 227 ATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI 286

Query: 565 MQRASE 570
            Q A +
Sbjct: 287 FQEARD 292



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 79/167 (47%)

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F  L  GY   G L + ++    M+G   +     +  LI+A  K      A    + + 
Sbjct: 57  FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            + L P  + +N +++ F KA  VD    +  EM+ + C P+ +T++ILI   C  G + 
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +A+ +F  M   GC P+  T  S+I  L K G  ++AF + +  + +
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSE 223


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 169/292 (57%), Gaps = 1/292 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PD + +N +I  L + GEV +A +    M  +G  PD V Y T+ISG C++  V+   +
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E++ + +  PD+VTYTSVI G CK GKM +A  ++NEM   G++P  VT+  LIDG+
Sbjct: 369 LFDEMR-RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G M  A  +  +M+  G  P+VVT+++L DG C+NG+++   +L  EM  K L PNV
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           YT+  ++N LCK   +    + ++++      P    Y  ++D +CK G + +A+ ++  
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRI 547

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           M  KR +P  VTF +L+ G CM G + +   +   ML  G  P+  T NSL+
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 212/435 (48%), Gaps = 4/435 (0%)

Query: 137 KLGLK-FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K+ +K F EF  + +  N    + N+V+  LC++G       +   M   G+ P+     
Sbjct: 224 KIAVKVFEEFPELGVCWNTV--SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYG 281

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             VS   R G+ D    L+ + +   +    ++YN+++  L K     EA  + +   + 
Sbjct: 282 VVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKW 341

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              PD   +  +I G  ++G V  A + F +M      PDIVTY ++I G+C+  ++   
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA 401

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            E+  E+  K    PD VTYT++I GYCK G+M +A  ++N+M   G+ P+ VT+  L D
Sbjct: 402 REMFNEMLVKG-LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  K G +  A  +   M   G  P+V T++++++G C+ G + Q +KL +EM      P
Sbjct: 461 GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +  T+T L++A CK   +  A   L+ +    L P    +N +++GFC +G +++   ++
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLI 580

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             M EK   P+  TF  L+  +C+K  M     I+  M   G  PD  T N LI    K 
Sbjct: 581 EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKA 640

Query: 556 GMPNEAFRIMQRASE 570
               EA+ + +   E
Sbjct: 641 RNMKEAWFLHKEMVE 655



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 209/415 (50%), Gaps = 4/415 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS--SCIRAGKCDAAKGLLS 215
            ++L  + L E G     Q +F  +   G + +      F+S  SC   G   A K +  
Sbjct: 173 VFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVK-VFE 231

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +F    V  +T   N +L+ L +     EA  +  +     + PD  ++ +++ G  RIG
Sbjct: 232 EFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIG 291

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E+ K  +   ++   G  PD   YN +I  LC+  EV    +LL+ ++    F PD V Y
Sbjct: 292 ELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF-PDNVVY 350

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T+VISG+CKLG +  A  +++EM    I P  VT+  +I G  K G MV A  M   ML 
Sbjct: 351 TTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV 410

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD VT+++LIDGYC+ G++ +   + ++M  K L+PNV T+T L + LCK   ++ 
Sbjct: 411 KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDV 470

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L ++    L P  + YN +++G CK GN+++   ++ EM+     PD +T+T L+ 
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +C  G M +A  +   ML     P  +T N L++     GM  +  R+++   E
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 198/401 (49%), Gaps = 1/401 (0%)

Query: 167 CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           C +G  D V  + D ++  G  P+  +    +    + G+   A+ LL   R   V    
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
            +Y ++++   K  N   A  +F E  R    PD  T+  +I G+ + G++ +A E F +
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  PD VTY  LI G C+  E+     +  ++  K   +P+VVTYT++  G CK G
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG-LTPNVVTYTALADGLCKNG 466

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           ++D A  + +EM+  G++P+  T+N +++G  K+GN+     + E M   G+ PD +T++
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +L+D YC+ G++ +  +L   M  K L P + TF +L+N  C    L D  R ++ +   
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            ++P    +N ++  +C   N+     I   M ++   PD  T+ ILI GHC    M EA
Sbjct: 587 GIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEA 646

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +  +M+  G +    T ++LI    K     EA ++ + 
Sbjct: 647 WFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEE 687



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 191/386 (49%), Gaps = 2/386 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+ G     + +   MR  G  P++ +    +S   + G   AA  L  + R
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++      Y S+++ + K     EA  MF E      +PD  T+  LI G  + GE+K
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMK 434

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AF     M   G +P++VTY  L  GLC+  E+   +ELL E+  K    P+V TY ++
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG-LQPNVYTYNTI 493

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ++G CK+G +++   +  EM+  G  P  +T+  L+D + K+G M  A  +   ML+   
Sbjct: 494 VNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL 553

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P +VTF+ L++G+C +G L  G +L + M  K + PN  TF  L+   C +N +     
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K +    ++P    YN +I G CKA N+ EA  +  EM EK       T+  LI G  
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFY 673

Query: 519 MKGRMVEAISIFNKMLRIG-CAPDDI 543
            + + VEA  +F +M + G  A  DI
Sbjct: 674 KRKKFVEARKLFEEMRKHGLVAEKDI 699



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 160/330 (48%), Gaps = 1/330 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  +C+ G     + +F+ M   G  P+       +    +AG+   A  + +Q 
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +   Y +L + L K    D A  +  E  R   QP+ +T+N ++ GL +IG +
Sbjct: 444 VQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNI 503

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++  +   +M   G  PD +TY TL+   C++ E+A+ HELL+ +       P +VT+  
Sbjct: 504 EQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR-IMLNKRLQPTLVTFNV 562

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G+C  G ++    +   M   GI P+A TFN L+  +    NM +   + + M   G
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD  T++ LI G+C+   + +   L  EM  K  S    T+  LI    K  +  +AR
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           +  ++++ + LV +  +Y+  +D   + GN
Sbjct: 683 KLFEEMRKHGLVAEKDIYDIFVDVNYEEGN 712



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 38/270 (14%)

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C    +  A  ++ E    G+  + V+ N+++    ++G +  A  +  +M   G  PDV
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDV 277

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           V++  ++ GYCR G+L++ LKL DE+KGK L P+ Y +  +I  LCK   + +A + L+ 
Sbjct: 278 VSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRG 337

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR---------------CK--- 504
           ++   + P   +Y  VI GFCK GNV  A  +  EM  K+               CK   
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397

Query: 505 -----------------PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
                            PD+VT+T LI G+C  G M EA S+ N+M++ G  P+ +T  +
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457

Query: 548 LISCLLKGG---MPNEAFRIMQRASEDQNL 574
           L   L K G   + NE    M R     N+
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNV 487



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 123/304 (40%), Gaps = 34/304 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G       V + M   G  PN            + G+ D A  LL + 
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + + YN+++N L K  N ++ V + +E       PDT T+  L+    ++GE+
Sbjct: 479 SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEM 538

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK------SEFS-- 329
            KA E    M +    P +VT+N L++G C    +  G  L++ +  K      + F+  
Sbjct: 539 AKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSL 598

Query: 330 --------------------------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                                     PD  TY  +I G+CK   M +A  ++ EM   G 
Sbjct: 599 MKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGY 658

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
             +A T++ LI GF K    V A  + E M   G + +   +   +D     G     L+
Sbjct: 659 SVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLE 718

Query: 424 LCDE 427
           LCDE
Sbjct: 719 LCDE 722


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 198/385 (51%), Gaps = 11/385 (2%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDA-----AKGLLSQFRPGEVTMSTFMYNSLLNAL 236
           M   G  PN+  +   ++   +  + D      AKG+    +P  VT +T     L+N L
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTT-----LINGL 55

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K     +AV +F +      QPD +T+  +I GL +IGE   A   F  M   GC  ++
Sbjct: 56  GKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNV 115

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           VTY+TLI  LC+   V    ++   +K K + SP + TYTS+I G C   +  +A+ + N
Sbjct: 116 VTYSTLIHSLCKYRRVNEALDIFSYMKAK-DISPTIFTYTSLIQGLCNFSRWKEASALLN 174

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EM S  I P+ VTFNVL+D F K G +++AE + + M   G  PDVVT++SL+ GY    
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT 234

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++ +  KL D M  K   P+V++++ILIN  CK  R+++A++   ++      P    YN
Sbjct: 235 EVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYN 294

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I G C+ G + EA  +   M      P+  T+ IL+ G C +G + +A  +F  M   
Sbjct: 295 TLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQST 354

Query: 537 GCAPDDITVNSLISCLLKGGMPNEA 561
              P+ +  N L++ + K G   +A
Sbjct: 355 YLKPNLVMYNILVNAMCKSGNLKDA 379



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC++G       +F  M   G   N       + S  +  + + A  + S  
Sbjct: 82  TYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYM 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +  +++ + F Y SL+  L   +   EA  +  E   L   P+  TFN+L+    + G+V
Sbjct: 142 KAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKV 201

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A      M   G  PD+VTYN+L+ G     EV    +L  +V       PDV +Y+ 
Sbjct: 202 LAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF-DVMITKGCKPDVFSYSI 260

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  ++D+A  ++NEM   G  P+ V++N LI G  ++G +  A+ + + M + G
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG 320

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP++ T++ L+DG+C+ G L +  +L   M+   L PN+  + IL+NA+CK   L DAR
Sbjct: 321 NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDAR 380

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +L    L P   +Y  +I+G CK G +DEA      ME+  C PD+ ++ ++I G 
Sbjct: 381 ELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGF 440

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
                   A+ +  +M   G   D
Sbjct: 441 LQHKDESRAVHLIGEMRDRGFITD 464



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 209/423 (49%), Gaps = 2/423 (0%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           +L    LG   L    + L L  +  T+  ++  L ++G       +FD M + G  P+ 
Sbjct: 22  QLQRVDLGFSVLA-KGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDD 80

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 ++   + G+   A GL  +       ++   Y++L+++L K    +EA+ +F  
Sbjct: 81  YTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSY 140

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                  P  +T+  LIQGL      K+A     +M S    P++VT+N L+   C+  +
Sbjct: 141 MKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGK 200

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           V     +LK +  +    PDVVTY S++ GY    ++ +A  +++ M + G KP   +++
Sbjct: 201 VLAAEGVLKTMT-EMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYS 259

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           +LI+G+ K   +  A+ +   M+  G  P+ V++++LI G C+ G+L +   L   M   
Sbjct: 260 ILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTN 319

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              PN+YT+ IL++  CK+  L  A R  + ++   L P   MYN +++  CK+GN+ +A
Sbjct: 320 GNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDA 379

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             + +E+     +P+   +T +I G C +G + EA+  F  M   GC PD+ + N +I  
Sbjct: 380 RELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRG 439

Query: 552 LLK 554
            L+
Sbjct: 440 FLQ 442



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 166/320 (51%), Gaps = 9/320 (2%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+T T NILI    ++  V   F         G  P IVT+ TLI+GL +V + A+  EL
Sbjct: 8   PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             ++  +    PD  TYT++I+G CK+G+   A G++ +M   G + + VT++ LI    
Sbjct: 68  FDDMVARG-CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLC 126

Query: 379 KVGNMVSA----EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           K   +  A     YM+ + +S    P + T++SLI G C   +  +   L +EM   N+ 
Sbjct: 127 KYRRVNEALDIFSYMKAKDIS----PTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PNV TF +L++  CKE ++  A   LK +    + P    YN ++ G+     V EA  +
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              M  K CKPD  +++ILI G+C   R+ EA  +FN+M+  G  P++++ N+LI  L +
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302

Query: 555 GGMPNEAFRIMQRASEDQNL 574
            G   EA  + +    + NL
Sbjct: 303 LGRLREAQDLFKNMHTNGNL 322



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 1/247 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M            + +FD M + G  P+       ++   +A + D AK L ++ 
Sbjct: 222 TYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEM 281

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   YN+L++ L +     EA  +FK      + P+ +T+ IL+ G  + G +
Sbjct: 282 IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYL 341

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF  F  M S    P++V YN L++ +C+   +    EL  E+ F     P+V  YT+
Sbjct: 342 GKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSEL-FVIGLQPNVQIYTT 400

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK G +D+A   +  M   G  P   ++NV+I GF +  +   A ++   M   G
Sbjct: 401 IINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460

Query: 398 YLPDVVT 404
           ++ D  T
Sbjct: 461 FITDAGT 467



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%)

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P     N +I+ FC+   VD    ++A+  +   +P  VTFT LI G    G+  +A+
Sbjct: 6   LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +F+ M+  GC PDD T  ++I+ L K G    A  + ++  E
Sbjct: 66  ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEE 108


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 212/444 (47%), Gaps = 37/444 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ SL   GL D ++ V+  M  D   PN       V+   + G  + A   +S+  
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------YFRLYSQ-------- 258
              +    F Y SL+    ++ + D A  +F E            Y  L           
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 259 ---------------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
                          P   T+ +LI+ L       +A     +M   G  P+I TY  LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             LC   +  +  ELL ++  +    P+V+TY ++I+GYCK G ++ A  +   M S  +
Sbjct: 366 DSLCSQCKFEKARELLGQM-LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+  T+N LI G+ K  N+  A  +  +ML    LPDVVT++SLIDG CR+G  +   +
Sbjct: 425 SPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L   M  + L P+ +T+T +I++LCK  R+ +A      L+   + P   MY  +IDG+C
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           KAG VDEA++++ +M  K C P+ +TF  LI G C  G++ EA  +  KM++IG  P   
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603

Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
           T   LI  LLK G  + A+   Q+
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQ 627



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 194/400 (48%), Gaps = 2/400 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TY ++++SLC          +   M   G  PN       + S     K + A+ LL
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            Q     +  +   YN+L+N   K+   ++AV + +        P+T T+N LI+G  + 
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK- 440

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             V KA      M      PD+VTYN+LI G CR       + LL  +  +    PD  T
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG-LVPDQWT 499

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YTS+I   CK  ++++A  +++ +   G+ P+ V +  LIDG+ K G +  A  M E+ML
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S   LP+ +TF++LI G C +G+L +   L ++M    L P V T TILI+ L K+   +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    +Q+  +   P    Y   I  +C+ G + +A  ++A+M E    PD  T++ LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            G+   G+   A  +  +M   GC P   T  SLI  LL+
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 207/455 (45%), Gaps = 37/455 (8%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L+  F TY  ++   C+    DS   VF+ M   G   N       +     A + 
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  L  + +  E   +   Y  L+ +L       EA+ + KE      +P+  T+ +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I  L    + +KA E    M   G  P+++TYN LI+G C+   +    +++ E+    +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRK 423

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SP+  TY  +I GYCK   + KA G+ N+M    + P  VT+N LIDG  + GN  SA 
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M   G +PD  T++S+ID  C++ ++ +   L D ++ K ++PNV  +T LI+  
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI------------- 494
           CK  ++++A   L+++   + +P    +N +I G C  G + EA ++             
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602

Query: 495 ----------------------VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
                                   +M     KPD  T+T  I  +C +GR+++A  +  K
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           M   G +PD  T +SLI      G  N AF +++R
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 199/465 (42%), Gaps = 56/465 (12%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TY +++ SLC     +  + +   M   G +PN       ++   + G  + A  ++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                 +++ +T  YN L+    K +N  +A+ +  +       PD  T+N LI G  R 
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G    A+     M   G  PD  TY ++I  LC+   V    +L   ++ K   +P+VV 
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG-VNPNVVM 534

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I GYCK GK+D+A  +  +M S    P+++TFN LI G    G +  A  + E+M+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P V T + LI    ++G  +       +M      P+ +T+T  I   C+E RL 
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT----- 509
           DA   + +++ N + P  F Y+ +I G+   G  + A  ++  M +  C+P + T     
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714

Query: 510 ------------------------------------------------FTILIIGHCMKG 521
                                                           +  LI+G C  G
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774

Query: 522 RMVEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +  A  +F+ M R  G +P ++  N+L+SC  K    NEA +++
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 186/390 (47%), Gaps = 48/390 (12%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + Y SLL  L+  NN    V +FK    +    D+    + +  L R     + FE  
Sbjct: 122 SVYSYASLLTLLI--NNGYVGV-VFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELK 178

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
           Y +   GC      YNTL++ L R   V    ++  E+  + +  P++ TY  +++GYCK
Sbjct: 179 YKL-IIGC------YNTLLNSLARFGLVDEMKQVYMEM-LEDKVCPNIYTYNKMVNGYCK 230

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG---------KVGNMVSAEYMRERMLS 395
           LG +++A    +++   G+ P   T+  LI G+          KV N +  +  R   ++
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290

Query: 396 FGYL--------------------------PDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           + +L                          P V T++ LI   C + + ++ L L  EM+
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              + PN++T+T+LI++LC + +   AR  L Q+    L+P    YN +I+G+CK G ++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  +V  ME ++  P+  T+  LI G+C K  + +A+ + NKML     PD +T NSLI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
               + G  + A+R++   + D+ L    W
Sbjct: 470 DGQCRSGNFDSAYRLLSLMN-DRGLVPDQW 498



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 192/414 (46%), Gaps = 22/414 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ SLC+    +    +FD +   G  PN  M    +    +AGK D A  +L + 
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ++  +N+L++ L       EA  + ++  ++  QP   T  ILI  L + G+ 
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+  F  M S G  PD  TY T I   CR   +    +++ +++ ++  SPD+ TY+S
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR-ENGVSPDLFTYSS 677

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY  LG+ + A  +   M   G +PS  TF  LI       +++  +Y +++    G
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK------HLLEMKYGKQK----G 727

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++   S+++       + +  ++L ++M   +++PN  ++  LI  +C+   L  A 
Sbjct: 728 SEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780

Query: 458 RFLKQLKWND-LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +    ++ N+ + P   ++N ++   CK    +EA  +V +M      P   +  +LI G
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQR 567
              KG      S+F  +L+ G   D++    +I  + K G+     E F +M++
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 18/323 (5%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            LE   V + L  +  T  +++  L + G  D     F  M S G  P++     F+ + 
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            R G+   A+ ++++ R   V+   F Y+SL+         + A  + K       +P  
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707

Query: 262 WTFNILIQGL------------------SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            TF  LI+ L                  S + E     E    M     +P+  +Y  LI
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            G+C V  +    ++   ++     SP  + + +++S  CKL K ++A  + ++M   G 
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   +  VLI G  K G       + + +L  GY  D + +  +IDG  + G +    +
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887

Query: 424 LCDEMKGKNLSPNVYTFTILINA 446
           L + M+      +  T+++LI  
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 219/419 (52%), Gaps = 3/419 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + L L  +  T+  ++  LC++G       +FD M + G  P+       ++   + G+ 
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGET 219

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNI 266
            AA GLL +        +   Y++++++  K    +EA+ +F  Y ++    PD +T+N 
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF-SYMKVKGISPDIFTYNS 278

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LIQGL    + K+A     +M S    PDIVT+N L+  +C+  +V+    +LK +  + 
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMT-EM 337

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PDVVTY+S++ GY    ++ +A  +++ M + G KP   ++N+LI+G+ KV  +  A
Sbjct: 338 GVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEA 397

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + +   M+  G  P+ V++++LI G C+ G L +   L   M      PN++T++IL++ 
Sbjct: 398 KQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDG 457

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK+     A R  + ++     P   MYN +ID  CK+GN+ +A  + +E+  K  +P+
Sbjct: 458 FCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPN 517

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              +T +I G C +G + EA+  F  M   GC PD+I+ N +I   L     + A +++
Sbjct: 518 AQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLI 576



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 194/384 (50%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC++G   +   +   M   G  PN       + S  +  + + A  + S  
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM 264

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   ++   F YNSL+  L   +   EA  +  E   L   PD  TFN+L+  + + G+V
Sbjct: 265 KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G  PD+VTY++L+ G    +EV    +L   +  K    PDV +Y  
Sbjct: 325 SEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG-CKPDVFSYNI 383

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK+ ++D+A  ++NEM   G+ P+ V++N LI G  ++G++  A  + + M + G
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG 443

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP++ T+S L+DG+C+ G   +  +L   M+     PN+  + ILI+A+CK   L DAR
Sbjct: 444 NLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDAR 503

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   +L    L P   +Y  +I+G CK G +DEA      MEE  C PD++++ ++I G 
Sbjct: 504 KLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGF 563

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
                   A+ +  +M   G   D
Sbjct: 564 LHHKDESRAVQLIGEMRDKGFIAD 587



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 200/428 (46%), Gaps = 37/428 (8%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNS 231
           D     F++M     LP        +S+ ++ G+  D    L  Q     ++ + +  + 
Sbjct: 79  DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSI 138

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+N        D A  +  +  +L  QP   TF  LI  L ++G+  +A E F DM + G
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG 198

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEV----------------------------- 322
           C PD+ TY T+I+GLC++ E A    LLK++                             
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEAL 258

Query: 323 ------KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
                 K K   SPD+ TY S+I G C   +  +A+ + NEM S  I P  VTFNVL+D 
Sbjct: 259 DIFSYMKVKG-ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K G +  A+ + + M   G  PDVVT+SSL+ GY    ++ +  KL D M  K   P+
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           V+++ ILIN  CK  R+++A++   ++    L P    YN +I G C+ G++ EA  +  
Sbjct: 378 VFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFK 437

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M      P+  T++IL+ G C +G   +A  +F  M      P+ +  N LI  + K G
Sbjct: 438 NMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSG 497

Query: 557 MPNEAFRI 564
              +A ++
Sbjct: 498 NLRDARKL 505



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 184/347 (53%), Gaps = 2/347 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +  LL+A+VK     + V    +   L    P+ +T +ILI   S +  V  AF     +
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI 159

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  P IVT+ TLI+ LC+V + A+  EL  ++  +    PDV TYT++I+G CK+G+
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG-CRPDVYTYTTIINGLCKIGE 218

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
              A G+  +M   G +P+ VT++ +ID   K   +  A  +   M   G  PD+ T++S
Sbjct: 219 TAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNS 278

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI G C   Q  +   L +EM+  N+ P++ TF +L++ +CKE ++++A+  LK +    
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    Y+ ++ G+     V EA  +   M  K CKPD  ++ ILI G+C   R+ EA 
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            +FN+M+  G  P++++ N+LI  L + G   EA  + +    + NL
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNL 445



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 141/318 (44%), Gaps = 38/318 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++ LC          + + MRS   +P+       V +  + GK   A+G+L   
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334

Query: 218 -----RPGEVTMSTFMY------------------------------NSLLNALVKQNNA 242
                 P  VT S+ MY                              N L+N   K    
Sbjct: 335 TEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRI 394

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           DEA  +F E       P+  ++N LI GL ++G +++A   F +M + G  P++ TY+ L
Sbjct: 395 DEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSIL 454

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFS-PDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           + G C+     +   L + ++  S +S P++V Y  +I   CK G +  A  +++E+   
Sbjct: 455 LDGFCKQGYFGKAFRLFRAMQ--STYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G++P+A  +  +I+G  K G +  A      M   G  PD ++++ +I G+  +   ++ 
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRA 572

Query: 422 LKLCDEMKGKNLSPNVYT 439
           ++L  EM+ K    +V T
Sbjct: 573 VQLIGEMRDKGFIADVGT 590


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 208/401 (51%), Gaps = 2/401 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N ++ SL + G    V+ V+  M       N    +  ++   + GK   A  ++   + 
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
              + S   YN++++   K     +A  + KE       P+  TFNILI G  R   V  
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A + F +M   G  P++VTYN+LI+GLC   ++     L  ++       P+VVTY ++I
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG-LKPNVVTYNALI 376

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +G+CK   + +A  + +++   G+ P+ +TFN LID +GK G M  A  +R  ML  G  
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+V T++ LI G+CR G + +  KL  EM+G  L  ++ T+ IL++ALCK+     A R 
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L ++    L P    YN +IDG+ + GN   A  +   ME+K  + + VT+ +LI G C 
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL-KGGMPN 559
           KG++ EA  + N+ML  G  P+  T + L   ++ KG +P+
Sbjct: 557 KGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 240/527 (45%), Gaps = 57/527 (10%)

Query: 74  NGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLE-VIKR 132
           N    PF      Y   N   F     + L+   + S    + + ++ +P + L+ +   
Sbjct: 26  NNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKL--KTIVKETNPSSLLQHLFNS 83

Query: 133 LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
              P L L + ++++      H+ + +  ++  L     ++ ++ + D    + H  NS 
Sbjct: 84  EAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNST 143

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           +  F   S + +  C                 ++ + + L+ A VK    D A+  F   
Sbjct: 144 I--FHSLSVLGSWGC----------------ANSIIVDMLVWAYVKNGEMDLALEGFDRA 185

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
                +    + N ++  L + G +      + +M       ++VT++ +I+GLC+V + 
Sbjct: 186 GDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKF 245

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
            +  ++++++K    FSP V+TY ++I GYCK GKM KA  +  EM +  I P+ +TFN+
Sbjct: 246 QKAGDVVEDMKAWG-FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LIDGF +  N+ +A+ + E M   G  P+VVT++SLI+G C NG+L++ L L D+M G  
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID------------ 480
           L PNV T+  LIN  CK+  L +AR  L  +    L P    +N +ID            
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424

Query: 481 -----------------------GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                                  GFC+ GNV EA  +  EME    K D VT+ IL+   
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C KG   +A+ + ++M  +G  P  +T N+LI    + G    A  +
Sbjct: 485 CKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNV 531



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 36/364 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++V+  LC++G       V + M++ G  P+       +    +AGK   A  LL + 
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   +N L++   +  N   A  +F+E  R   QP+  T+N LI GL   G++
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G  P++VTYN LI+G C+   +    E+L ++  K   +P+V+T+ +
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG-KRGLAPNVITFNT 409

Query: 338 VISGYCKLGKMDKA---------TGI------YN--------------------EMNSCG 362
           +I  Y K G+MD A         TG+      YN                    EM   G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +K   VT+N+L+D   K G    A  + + M   G  P  +T+++LIDGY R G     L
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            +   M+ K    N+ T+ +LI   C + +L +A R L ++    L+P    Y+ + D  
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM 589

Query: 483 CKAG 486
            + G
Sbjct: 590 MEKG 593



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 125/293 (42%), Gaps = 29/293 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  R  L  N    TYN ++  LC  G  D    + D M   G  PN       ++  
Sbjct: 322 FEEMQRQGLQPN--VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            +      A+ +L       +  +   +N+L++A  K    D+A  +          P+ 
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+N LI G  R G VK+A +   +M   G   D+VTYN L+  LC+  E  +   LL E
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF---- 377
           + F+   +P  +TY ++I GY + G    A  +   M   G + + VT+NVLI GF    
Sbjct: 500 M-FEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKG 558

Query: 378 ---------------GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
                          G + N  + + +R+ M+  G++PD       IDG+  N
Sbjct: 559 KLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD-------IDGHLYN 604


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 239/509 (46%), Gaps = 75/509 (14%)

Query: 120 KLSP--LNSLEVIKRLDNPKLGLKFLEFSRV--NLSLNHSFKTYNLVMRSLCEMGLHDSV 175
           +LSP   N   +++ L +  L  K +E  R      +  +  TYN ++ S C+ G     
Sbjct: 194 RLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG 253

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
             +   M+  G  PN       ++   + G+ + AKGL+ +     + +S + YN L+  
Sbjct: 254 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYG 313

Query: 236 LVKQNNADEAVYMFKEYF----------------------RLYSQ-------------PD 260
              +    EA+ + +E                        R+                PD
Sbjct: 314 YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             ++N LI G  R+G + KAF  F ++ S    P IVTYNTL+ GLCR  E+    +L  
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK---------------- 364
           E+      +PD+VTYT +++G CK+G +  A   ++EM   G++                
Sbjct: 434 EM-INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 365 -------------------PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
                              P  + +NV++DG  K+GN+  A  + ++M+S G +PD VT+
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +S+I  +  NG+L +G ++  EM  K L+P+V T+T+LI+    + RL  A  +  +++ 
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             ++P    YN +I+G CK   +D+A    AEM EK   P+K ++TILI  +C  G   E
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLK 554
           A+S++ +ML  G  PD  T ++L+  L K
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 207/450 (46%), Gaps = 50/450 (11%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S K  +L++    +  + +    VFD M      P+       V +C R  +    K L+
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPD-------VKNCNRILRILRDKDLM 215

Query: 215 SQFRPGEVTMSTF-------MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           S+      TM  F        YN+LL++  K     + + +  E  R    P+  T+N+L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GLS+ GE ++A     +M   G      TYN LI G      +A    L +E+  K  
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SP V TY S I G CKLG+M  A    ++M +  + P  V++N LI G+ ++GN++ A 
Sbjct: 336 -SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + + S    P +VT+++L+DG CR G+L    +L  EM  + ++P++ T+TIL+N  
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 448 CKENRLNDARRF--------------------LKQLKWND---------------LVPKP 472
           CK   L+ A+ F                    + +LK  D                 P  
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            +YN V+DG CK GN++EA+ ++ +M      PD VT+T +I  H   GR+ +   IF +
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           ML  G  P  +T   LI      G    AF
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 172/329 (52%), Gaps = 1/329 (0%)

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K++  ++ + +F +  +    PD    N +++ L     + KA E +  MG FG  P IV
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYNTL+   C+  +V +G +LL E++ +   +P+ VTY  +I+G  K G+ ++A G+  E
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRG-CAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G+K SA T+N LI G+   G +  A  ++E M+  G  P V T++S I G C+ G+
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++  ++   +M   NL P+V ++  LI   C+   L  A     +L+   L P    YN 
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG C+ G ++ A  +  EM  +   PD VT+TIL+ G C  G +  A   F++ML  G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              D     + I   LK G  + AF + +
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQE 503



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 163/348 (46%), Gaps = 5/348 (1%)

Query: 109 LSDTCARYLCEKLSPLNSLEV-IKRLDNPKLGLKFLEFSRV-NLSLNHSFKTYNLVMRSL 166
           LSD  A  L   +   N+L     RL N  L   FL F  + ++ L  +  TYN ++  L
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGN--LMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419

Query: 167 CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           C  G  +  Q +   M ++G  P+       V+   + G    A+    +     + + +
Sbjct: 420 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDS 479

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           + Y + +   +K  +   A  + +E       PD   +N+++ GL ++G +++A E    
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M S G  PD VTY ++I        + +G E+  E+  K   +P VVTYT +I G+   G
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-LTPSVVTYTVLIHGHAGKG 598

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           ++++A   ++EM   GI P+ +T+N LI+G  KV  M  A      M+  G  P+  +++
Sbjct: 599 RLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYT 658

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            LI+  C  G   + L L  +M  + + P+  T + L+  L K+ +L 
Sbjct: 659 ILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ 706



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%)

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI  Y +   + Q L + D+M    LSP+V     ++  L  ++ ++ A    + +    
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    YN ++D +CK G V +   +++EM+ + C P+ VT+ +LI G   KG   +A 
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +  +ML+ G      T N LI      GM  EA  + +
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQE 328


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 15/441 (3%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +   H+  TYN ++  L     HD    VF  M      P++      +    R+ + + 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+ LL + +         +YN+L++   K  +  +A     E  + +  P   T+  ++ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL +    + A +   +M   GCSP+I TYN ++ GLC   ++    ++L+E+  +  F 
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF- 179

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDVVTY S I G CK  ++D+A      M    + P  V++  +I+G  K G++ SA  M
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRM 236

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + M + G  PDVVT+SSLIDG+C+ G++ + + L D M      PN+  +  L+ AL +
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP---- 505
              +  A   L +++     P    YN  IDG CKA  V +A  +   M E+ C P    
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356

Query: 506 ------DKVTFTILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVNSLISCLLKGGMP 558
                 D + +T+L+ G C  GR  EA ++F+K+L    C PD    N ++    K    
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 416

Query: 559 NEAFRIMQRASEDQNLQLPSW 579
           ++A +I ++  E     + +W
Sbjct: 417 DKALQIHKQMLEKNCCNVVTW 437



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 198/402 (49%), Gaps = 16/402 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LCE    D  + + + M   G+ P+      F+    +  + D A+  L++ 
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 208

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT     Y +++N L K  + D A  M          PD  T++ LI G  + GEV
Sbjct: 209 ---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEV 265

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   GC P++V YN+L+  L R+  + +  ++L E++ +  F+PDVV+Y +
Sbjct: 266 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG-FTPDVVSYNA 324

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN----------VLIDGFGKVGNMVSAE 387
            I G CK  ++ KA  +++ M   G  P+A +++          VL+DG  K G    A 
Sbjct: 325 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEAC 384

Query: 388 YMRERMLSFGYL-PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
            +  ++L      PDV  ++ ++D +C+  Q+++ L++  +M  KN   NV T+ IL++ 
Sbjct: 385 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHG 443

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LC ++RL+DA   L  +     +P    Y  ++D  CK G    A  +  E  +  C PD
Sbjct: 444 LCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPD 503

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            VT++ LI G   +    EA  +F K++     PDD T+  L
Sbjct: 504 VVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 205/428 (47%), Gaps = 49/428 (11%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           LP        V    +A +   A  LL + R    + + + YN ++  L ++   DEA  
Sbjct: 109 LPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKK 168

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           M +E       PD  T+N  I+GL +   V +A +F   M     +PD+V+Y T+I+GLC
Sbjct: 169 MLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLC 225

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  ++     +L  +  +   +PDVVTY+S+I G+CK G++++A G+ + M   G +P+ 
Sbjct: 226 KSGDLDSASRMLDHMSNRG-CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 284

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V +N L+    ++G++  AE M   M   G+ PDVV++++ IDG C+  ++ +   + D 
Sbjct: 285 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 344

Query: 428 MKGKNLSPN----------VYTFTILINALCKENRLNDA-RRFLKQLKWNDLVPKPFMYN 476
           M  +  +PN          +  +T+L++ LCK  R ++A   F K L      P  F YN
Sbjct: 345 MVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 404

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRC--------------------------------- 503
            ++D  CK   +D+A  I  +M EK C                                 
Sbjct: 405 VMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEG 464

Query: 504 -KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD VT+  L+   C  G+   A+ +F + ++ GC PD +T ++LI+ L+   M  EA+
Sbjct: 465 FIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY 524

Query: 563 RIMQRASE 570
            +  +  E
Sbjct: 525 LLFTKLVE 532



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC        + +   M  +G +P+       V +  + GK  AA  L  + 
Sbjct: 436 TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA 495

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G        Y++L+  LV +N A+EA  +F +       PD  T  +L + L  + + 
Sbjct: 496 VKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKP 555

Query: 278 KKA 280
           +KA
Sbjct: 556 RKA 558


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 205/412 (49%), Gaps = 2/412 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y++++  L ++G  D    +   M   G  P+       V +  +A + D A  L  + 
Sbjct: 82  SYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEM 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G       M+  L+  L +     +A   FK+  +   QP+   +N+L+ GL   G++
Sbjct: 142 IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQL 201

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F +M S  CSPD+VTYNTL+  +C+   V  G +L + ++  + + P+V+T+++
Sbjct: 202 EQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR-AAGYVPNVITFST 260

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C+ G+++KA  ++  M   G KP+  T+  LI G  +   ++ A  + E+M    
Sbjct: 261 LIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQAC 320

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG-KNLSPNVYTFTILINALCKENRLNDA 456
             PD V ++SLI GYC+ G +++  KL  EM G   L P + TF  LI+  CK  +L  A
Sbjct: 321 IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRA 380

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              + ++    L      Y  +I G  +A  +DEA  +  +M EK+   D V+    + G
Sbjct: 381 NELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGG 440

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            C  G + +A ++F    + G  P+  T   L   L+K G   +A ++M+ A
Sbjct: 441 LCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 492



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 203/410 (49%), Gaps = 2/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +N VM+        +  + V+ +M   G+ P++      +    + GK D +  +LS+ 
Sbjct: 47  AFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM 106

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T S   Y+SL+ AL K    D A  +F E  R    PD   F  LI GL + G+V
Sbjct: 107 VMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKV 166

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A E F  M   GC P++  YN L+ GLC   ++ + + L  E+K  S  SPDVVTY +
Sbjct: 167 KDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS-CSPDVVTYNT 225

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK  ++++   ++  M + G  P+ +TF+ LI G  + G +  A  +   ML  G
Sbjct: 226 LLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 285

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+  T+++LI G CR  ++ Q  +L ++M    + P+   +  LI   CK   +++A 
Sbjct: 286 CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 345

Query: 458 RFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +  +++     L P    +N +IDGFCK G +  AN +VAEM  K    D  T+ ILI G
Sbjct: 346 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAG 405

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
                ++ EA+ ++ +M       D ++  S +  L K G  ++A+ + +
Sbjct: 406 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFE 455



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 191/359 (53%), Gaps = 1/359 (0%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   +  + F Y+S++ +LVK+   +E+  + +E       PD + FN ++QG +R   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++KA E +  M   G  PD V+Y+ LI GL ++ ++    ++L E+  + + +P +  Y+
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQ-TPSMQAYS 119

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++    K  ++D A+ +++EM   G  P  + F  LI G  + G +  A    ++M   
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+V  ++ L+ G C +GQL Q   L  EMK  + SP+V T+  L++A+CK  R+ + 
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  + ++    VP    ++ +I G C+ G +++A  +   M E  CKP+K T+T LI G
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            C   ++++A  +F KM +    PD +  NSLI+   K G  +EA ++ +  S    LQ
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQ 358



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 217/459 (47%), Gaps = 22/459 (4%)

Query: 69  FHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLE 128
           F+G+  G +R           SN     + V   ++ S Y  D  + ++      ++ L 
Sbjct: 48  FNGVMQGFAR-----------SNNMEKAREVYQHMVESGYKPDNVSYHIL-----IHGLA 91

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
            I +LD     LK L    V      S + Y+ ++R+L +    D    +FD M   GH 
Sbjct: 92  KIGKLDE---SLKILS-EMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH 147

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+  M    +    +AGK   A     Q        +  +YN LL+ L      ++A  +
Sbjct: 148 PDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTL 207

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F E       PD  T+N L+  + +   V++  + F  M + G  P+++T++TLI GLCR
Sbjct: 208 FAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCR 267

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             E+ +  E+   +  ++   P+  TYT++ISG C+  K+ +A  ++ +M    I P AV
Sbjct: 268 TGELEKALEVFGSM-LEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAV 326

Query: 369 TFNVLIDGFGKVGNMVSAEYM-RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            +N LI G+ K G+M  AE + RE     G  P +VTF++LIDG+C+ G+L +  +L  E
Sbjct: 327 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 386

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  K L+ +  T+ ILI  L +  +L++A    KQ++    +  P      + G CK GN
Sbjct: 387 MGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN 446

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           +D+A  +     +    P+  TF IL       GR+ +A
Sbjct: 447 IDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 485



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 205/426 (48%), Gaps = 12/426 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
           TY+ +++SL +    +    V + M + G  P+       +    R+   + A+ +    
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 215 --SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
             S ++P  V+     Y+ L++ L K    DE++ +  E       P    ++ L++ L+
Sbjct: 72  VESGYKPDNVS-----YHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALA 126

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   V  A   F +M   G  PD + +  LI GLC+  +V    E  K++  K    P+V
Sbjct: 127 KARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP-KHGCQPNV 185

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             Y  ++ G C  G++++A  ++ EM S    P  VT+N L+D   K   +     + E 
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M + GY+P+V+TFS+LI G CR G+L + L++   M      PN YT+T LI+ LC+  +
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFT 511
           +  AR   +++    + P    YN +I G+CK G++DEA  +  EM      +P  VTF 
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI G C  G++  A  +  +M   G A D  T   LI+ L +    +EA  + ++  E 
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 572 QNLQLP 577
           + L  P
Sbjct: 426 KFLLDP 431



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 158/348 (45%), Gaps = 36/348 (10%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y L++  LC+ G        F  M   G  PN P+    +     +G+ + A  L ++ +
Sbjct: 154 YELIL-GLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMK 212

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
               +     YN+LL+A+ K    +E   +F+        P+  TF+ LI GL R GE++
Sbjct: 213 SHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELE 272

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL------------------- 319
           KA E F  M   GC P+  TY TLISGLCR  +V +  EL                    
Sbjct: 273 KALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 332

Query: 320 ----------------KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                           +E+   +   P +VT+ ++I G+CKLGK+ +A  +  EM + G+
Sbjct: 333 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 392

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
              + T+ +LI G  +   +  A  + ++M    +L D V+  S + G C+ G ++Q   
Sbjct: 393 AADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYA 452

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           + +  +     PN  TF IL  +L K  R+ DA++ ++  K  D+  +
Sbjct: 453 VFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 500


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 221/438 (50%), Gaps = 27/438 (6%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPN------SPMI---EFFVSSCIRAGKC 207
           T+N+++  LC +  +++ +  +   MR  G++P+       P +      +    + GK 
Sbjct: 12  TFNILINCLCNVKRVNEGLAAMAGIMRR-GYIPDIVTYSIRPDVTTSSMLIDILCKEGKV 70

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  LL         +    Y++L+  L  ++   EA ++F    +L  +PD  T+  L
Sbjct: 71  IEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTL 130

Query: 268 IQGLSRIGEVKKAF----EFFYDMGSFG--CSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           ++GL + G +  A     E   D G +G  C P +++Y+ +I GLC+        EL KE
Sbjct: 131 MKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKE 190

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +K +    PDV++YTS+I G+C  GK +KA  ++NEM   GI+P   T  VLID F K G
Sbjct: 191 MKAQG-MMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEG 249

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            ++ A  + E M+  G + D+VT+S+LI G C   ++++  +L   MK     P+   + 
Sbjct: 250 KVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYG 309

Query: 442 ILINALCKENRLNDARRFLKQLKWND--------LVPKPFMYNPVIDGFCKAGNVDEANV 493
            L+  LC+  ++N A   L Q   ND        + P     + +ID  CK G V EAN 
Sbjct: 310 TLMKGLCQTGKINIALH-LHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANE 368

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++  M ++ C  D VT++ LI G CM+ R+ EA  +F  M ++GC PD IT  +L+  L 
Sbjct: 369 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 428

Query: 554 KGGMPNEAFRIMQRASED 571
           + G  N A ++ Q    D
Sbjct: 429 QTGNINIALQLHQEMLND 446



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 227/507 (44%), Gaps = 100/507 (19%)

Query: 159 YNLVMRSLCEMG------------LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           Y  +M+ LC+ G            L+D+ Q     +R D  +  S M+   +    + GK
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPD--VTTSSML---IDILCKEGK 362

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A  LL         +    Y++L+  L  ++   EA ++F    +L  +PD  T+  
Sbjct: 363 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGT 422

Query: 267 LIQGLSRIGEVKKAF----EFFYDMGSFG--CSPDIVTYNTLISGLCRVNEVARGHELLK 320
           L++GL + G +  A     E   D G +G  C P +++Y+ +I GLC+        EL +
Sbjct: 423 LMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFE 482

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+K +    PDV++YT++I G+C  GK +KA  ++NEM   GI+P   T +VLID   K 
Sbjct: 483 EMKAQG-IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 541

Query: 381 GNMVSAEYMRE-----------------------------------RMLSFGYLPDVVTF 405
           G ++ A  + E                                   +M   G +P+VVT 
Sbjct: 542 GKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 601

Query: 406 SSLIDGYCRNGQLNQGLKLCDEM------KGKNLSPNVYTFTILINALCKENRLNDARRF 459
           ++L+ G C++G +   L+L   M       G N  PN  +++I+I+ LCK  R ++AR  
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFC-----------------------------------K 484
            K++K   ++P    Y  +I GFC                                   K
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G V EAN ++  M ++ C P+ VT+T L+ G CM  R+ EA  +F KM ++GC PD +T
Sbjct: 722 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 781

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASED 571
             +L+  L + G    A  + ++   D
Sbjct: 782 YGTLMKGLCQTGNIKTALELHKKMLSD 808



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 217/452 (48%), Gaps = 12/452 (2%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
            R  +    +  +Y++++  LC+    D  + +F+ M++ G +P+       +     +G
Sbjct: 448 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSG 507

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K + AK L ++     +       + L++ L K+    EA  + +   +     D  T  
Sbjct: 508 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCT 567

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--- 322
            L++GL     + KA + F  M   GC P++VT  TL+ GLC+   +    EL K +   
Sbjct: 568 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 627

Query: 323 --KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
              +     P+ ++Y+ +I G CK G+ D+A  ++ EM + G+ P  +++  LI GF + 
Sbjct: 628 TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 687

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G    A+Y+   M+  G  PDV TFS LID  C+ G++ +  +L + M  +   PN  T+
Sbjct: 688 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 747

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           T L+  LC  +R+++A +   +++    +P    Y  ++ G C+ GN+  A  +  +M  
Sbjct: 748 TTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLS 807

Query: 501 KRC------KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
                    KPD ++++I+I G C  GR  EA  +F +M  +G  P+ I+  SLI    +
Sbjct: 808 DTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCR 867

Query: 555 GGMPNEAFRIMQRASEDQNLQLPSWKKAVPLR 586
            G   +A  +      DQ +QL +   +V + 
Sbjct: 868 SGKLEDAKHLFNEMV-DQGVQLNAVTYSVMIH 898



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 204/417 (48%), Gaps = 13/417 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++   C  G  +  + +F+ M   G  P+       +    + GK   A  LL   
Sbjct: 495 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 554

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +      +L+  L  ++   +A  +F +  +L   P+  T   L++GL + G +
Sbjct: 555 IQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI 614

Query: 278 KKAFEFFYDMGS------FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           K A E   +M S        C P+ ++Y+ +I GLC+        EL KE+K      PD
Sbjct: 615 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI-PD 673

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V++YTS+I G+C+ GK   A  ++NEM   G++P   TF+VLID   K G ++ A  + E
Sbjct: 674 VISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 733

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G +P+ VT+++L+ G C N ++++  +L  +M+     P+V T+  L+  LC+  
Sbjct: 734 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 793

Query: 452 RLNDARRFLKQLKWN------DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            +  A    K++  +      +  P    Y+ +IDG CK G  DEA  +  EM+     P
Sbjct: 794 NIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 853

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           + +++T LI G C  G++ +A  +FN+M+  G   + +T + +I    K G  ++A 
Sbjct: 854 NVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 211/422 (50%), Gaps = 19/422 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-----DAAK 211
           TY  +M+ LC+ G ++ ++Q+  + +   G             S I  G C     D A+
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 478

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  + +   +      Y +L++        ++A  +F E   +  QPD  T ++LI  L
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G+V +A +    +   GC  D+VT  TL+ GLC  + +++  +L  +++ K    P+
Sbjct: 539 CKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ-KLGCMPN 597

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNS----CGI--KPSAVTFNVLIDGFGKVGNMVS 385
           VVT  +++ G C+ G +  A  ++  M S     GI  KP+A++++++IDG  K G    
Sbjct: 598 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 657

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + + M + G +PDV++++SLI G+CR+G+      L +EM    + P+V TF++LI+
Sbjct: 658 ARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 717

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCKE ++ +A   L+ +     +P    Y  ++ G C    + EA  +  +M++  C P
Sbjct: 718 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 777

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLR------IGCAPDDITVNSLISCLLKGGMPN 559
           D VT+  L+ G C  G +  A+ +  KML           PD I+ + +I  L K G  +
Sbjct: 778 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 837

Query: 560 EA 561
           EA
Sbjct: 838 EA 839



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 225/476 (47%), Gaps = 49/476 (10%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
            R  +    +  +Y++++  LC+    D  + +F  M++ G +P+       +     +G
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214

Query: 206 KCDAAKGLLSQF--------------------RPGEV---------------TMSTFMYN 230
           K + AK L ++                     + G+V                +    Y+
Sbjct: 215 KWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYS 274

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF----EFFYD 286
           +L+  L  ++   EA  +F    +L  +PD   +  L++GL + G++  A     E   D
Sbjct: 275 TLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLND 334

Query: 287 MGSFGCS---PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              +G     PD+ T + LI  LC+  +V   +ELL EV  +     D+VTY+++I G C
Sbjct: 335 TSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELL-EVMIQRGCILDIVTYSTLIKGLC 393

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS----FGY- 398
              ++ +AT ++  M   G +P A+T+  L+ G  + GN+  A  + + ML+    +G  
Sbjct: 394 MEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIK 453

Query: 399 -LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P ++++S +IDG C++ + ++  +L +EMK + + P+V ++T LI+  C   +   A+
Sbjct: 454 CKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 513

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    + P     + +ID  CK G V EAN ++  + ++ C  D VT T L+ G 
Sbjct: 514 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGL 573

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           CMK R+ +A  +F KM ++GC P+ +T  +L+  L + G    A  + +    D +
Sbjct: 574 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 629



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 172/330 (52%), Gaps = 16/330 (4%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFE---------FFYDMGSFGCSPDIVTYNTLISGLCRV 309
           PD++TFNILI  L  +  V +            +  D+ ++   PD+ T + LI  LC+ 
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            +V   +ELL EV  +     D+VTY+++I G C   ++ +AT ++  M   G +P A+T
Sbjct: 68  GKVIEANELL-EVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAIT 126

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLS----FGYL--PDVVTFSSLIDGYCRNGQLNQGLK 423
           +  L+ G  + GN+  A  + + ML+    +G    P ++++S +IDG C++ + ++  +
Sbjct: 127 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 186

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EMK + + P+V ++T LI+  C   +   A+    ++    + P       +ID FC
Sbjct: 187 LFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFC 246

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G V EAN ++  M  + C  D VT++ LI G CMK R+ EA  +F  M ++GC PD I
Sbjct: 247 KEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAI 306

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
              +L+  L + G  N A  + Q    D +
Sbjct: 307 AYGTLMKGLCQTGKINIALHLHQEMLNDTS 336



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 183/363 (50%), Gaps = 23/363 (6%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFR--------LYS-QPDTWTFNILIQGLSRIGE 276
           +F +N L+N L      +E +       R         YS +PD  T ++LI  L + G+
Sbjct: 10  SFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGK 69

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A E    M   GC  DIVTY+TLI GLC  + ++    L   ++ K    PD +TY 
Sbjct: 70  VIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ-KLGCRPDAITYG 128

Query: 337 SVISGYCKLGKMDKATGIYNEM-NSCG-----IKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +++ G C+ G ++ A  ++ EM N  G      KP+ ++++++IDG  K      A  + 
Sbjct: 129 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 188

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + M + G +PDV++++SLI G+C +G+  +   L +EM    + P+V T  +LI+  CKE
Sbjct: 189 KEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKE 248

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            ++ +A   L+ +     +     Y+ +I G C    + EA  +   M++  C+PD + +
Sbjct: 249 GKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAY 308

Query: 511 TILIIGHCMKGRMVEAISIFNKMLR------IGCAPDDITVNS-LISCLLKGGMPNEAFR 563
             L+ G C  G++  A+ +  +ML       I C   D+T +S LI  L K G   EA  
Sbjct: 309 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANE 368

Query: 564 IMQ 566
           +++
Sbjct: 369 LLE 371



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 42/256 (16%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K+L    V++ +     T+++++  LC+ G       + + M   G +PN          
Sbjct: 694 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN---------- 743

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
                                    T  Y +L+  L   +   EA  +F +  +L   PD
Sbjct: 744 -------------------------TVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778

Query: 261 TWTFNILIQGLSRIGEVKKAFEF----FYDMGSFGCS--PDIVTYNTLISGLCRVNEVAR 314
             T+  L++GL + G +K A E       D G +G +  PD+++Y+ +I GLC+      
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             EL KE+K      P+V++YTS+I G+C+ GK++ A  ++NEM   G++ +AVT++V+I
Sbjct: 839 ARELFKEMKALGVI-PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 897

Query: 375 DGFGKVGNMVSAEYMR 390
            GF K G +  A + +
Sbjct: 898 HGFCKEGQIDKALFQK 913



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 9/153 (5%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY---------NPV 478
           M+   L P+ +TF ILIN LC   R+N+    +  +     +P    Y         + +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           ID  CK G V EAN ++  M ++ C  D VT++ LI G CM+ R+ EA  +F  M ++GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            PD IT  +L+  L + G  N A ++ Q    D
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLND 153


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 202/348 (58%), Gaps = 5/348 (1%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+ AL+KQN + +  Y++KE  R   QP+ +TFN++I  L + G++ KA +   DM  +G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 292 CSPDIVTYNTLISGLCRV---NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            SP++V+YNTLI G C++    ++ +   +LKE+  ++E SP++ T+  +I G+ K   +
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM-VENEVSPNLTTFNILIDGFWKDDNL 312

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             +  ++ EM    + P+ +T+N LI+G    G +  A  MR++M+S G  P+++T+ SL
Sbjct: 313 PGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSL 372

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G+C+NG + + L + D +KG+   P    + +LI+A CK  +++D     ++++   +
Sbjct: 373 INGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           VP    YN +I G C+ GN++ A  +  ++  K   PD VTF IL+ G+C +G   +A  
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAM 491

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           +  +M ++G  P  +T N ++    K G    A  +  +  +++ L++
Sbjct: 492 LLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRM 539



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 201/390 (51%), Gaps = 12/390 (3%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +M +L +      V+ ++  M      PN       +++  + GK + A+ ++   +   
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 222 VTMSTFMYNSLLNALVK---QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
            + +   YN+L++   K        +A  + KE       P+  TFNILI G  +   + 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + + F +M      P+++TYN+LI+GLC   ++NE       +++    +   P+++TY
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIG----MRDKMVSAGVQPNLITY 369

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            S+I+G+CK G M +A  +++ +   G +P+   +N+LID + K+G +     ++E M  
Sbjct: 370 HSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G +PDV T++ LI G CRNG +    KL D++  K L P++ TF IL+   C       
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRK 488

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILI 514
           A   LK++    L P+   YN ++ G+CK GN+  A  +  +ME E+R + +  ++ +L+
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G+  KG++ +A  + N+ML  G  P+ IT
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 184/360 (51%), Gaps = 6/360 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG---KCDAAKGLL 214
           T+N+V+ +LC+ G  +  + V + M+  G+ PN       +    + G   K   A  +L
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    EV+ +   +N L++   K +N   ++ +FKE       P+  T+N LI GL   
Sbjct: 285 KEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNG 344

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++ +A      M S G  P+++TY++LI+G C+   +    ++   VK +    P    
Sbjct: 345 GKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGT-RPTTRM 403

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I  YCKLGK+D    +  EM   GI P   T+N LI G  + GN+ +A+ + +++ 
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           + G LPD+VTF  L++GYC  G+  +   L  EM    L P   T+ I++   CKE  L 
Sbjct: 464 NKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLK 522

Query: 455 DARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            A     Q+ K   L      YN ++ G+ + G +++AN+++ EM EK   P+++T+ I+
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 3/204 (1%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G K SA++   L+    K       EY+ + M+     P+V TF+ +I+  C+ G++N+ 
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCK---ENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
             + ++MK    SPNV ++  LI+  CK     ++  A   LK++  N++ P    +N +
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           IDGF K  N+  +  +  EM ++   P+ +T+  LI G C  G++ EAI + +KM+  G 
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362

Query: 539 APDDITVNSLISCLLKGGMPNEAF 562
            P+ IT +SLI+   K GM  EA 
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEAL 386



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 17/245 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++   C+ G+      +FD ++  G  P + M    + +  + GK D    L  + 
Sbjct: 368 TYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      YN L+  L +  N + A  +F +       PD  TF+IL++G    GE 
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTN-KGLPDLVTFHILMEGYCSRGES 486

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA     +M   G  P  +TYN ++ G C+   +     +  +++ +     +V +Y  
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY + GK++ A  + NEM   G+ P+ +T+                E ++E M+  G
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY----------------EIVKEEMVDKG 590

Query: 398 YLPDV 402
           ++PD+
Sbjct: 591 FVPDI 595


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 215/418 (51%), Gaps = 6/418 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S + +FK+YN+V+  L +         VF  M S G  P        + +     + D+A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             LL          ++ +Y +L++AL + N   EA+ + ++ F +  +PD  TFN +I G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L R G + +A +    M   G S D +TY  L+ GLCR+ +V     LL ++      +P
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP-----NP 339

Query: 331 DVVTYTSVISGYCKLGKMDKATG-IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           + V Y ++ISGY   G+ ++A   +YN M   G +P A TFN++IDG  K G +VSA  +
Sbjct: 340 NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALEL 399

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M++  + P+V+T++ LI+G+C+ G+L +  ++ + M  K LS N   +  LI ALCK
Sbjct: 400 LNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCK 459

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +  + +A +   ++      P  + +N +I+G CK   ++EA  +  +M  +    + VT
Sbjct: 460 DGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVT 519

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  L+    M+  + +A  + ++ML  GC  D+IT N LI  L K G   +   + + 
Sbjct: 520 YNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEE 577



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 213/403 (52%), Gaps = 16/403 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
           TY  +M  LC MG  D  + + + + +    PN+ +    +S  + +G+ + AK LL   
Sbjct: 312 TYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNN 367

Query: 215 ---SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
              + + P       + +N +++ LVK+     A+ +  E      +P+  T+ ILI G 
Sbjct: 368 MVIAGYEP-----DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGF 422

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G +++A E    M + G S + V YN LI  LC+   +    +L  E+  K    PD
Sbjct: 423 CKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG-CKPD 481

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           + T+ S+I+G CK  KM++A  +Y++M   G+  + VT+N L+  F    ++  A  + +
Sbjct: 482 IYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVD 541

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            ML  G   D +T++ LI   C+ G + +GL L +EM GK + P + +  ILI+ LC+  
Sbjct: 542 EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTG 601

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++NDA +FL+ +    L P    YN +I+G CK G+V EA+ +  +++ +  +PD +T+ 
Sbjct: 602 KVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYN 661

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            LI  HC +G   +A  +  K +  G  P+++T + LI+ ++K
Sbjct: 662 TLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 207/416 (49%), Gaps = 8/416 (1%)

Query: 157 KTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +T+N V+  LC  G +H++ +++ D M   G   ++    + +    R G+ D A+ LL+
Sbjct: 276 QTFNDVIHGLCRAGRIHEAAKLL-DRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLN 334

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +  P     +T +YN+L++  V     +EA   ++        +PD +TFNI+I GL + 
Sbjct: 335 KI-PNP---NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKK 390

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +  A E   +M +    P+++TY  LI+G C+   +    E++  +  K   S + V 
Sbjct: 391 GYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKG-LSLNTVG 449

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I   CK G +++A  ++ EM+  G KP   TFN LI+G  K   M  A  +   M 
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G + + VT+++L+  +     + Q  KL DEM  +    +  T+  LI ALCK   + 
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
                 +++    + P     N +I G C+ G V++A   + +M  +   PD VT+  LI
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            G C  G + EA ++FNK+   G  PD IT N+LIS     GM N+A  ++ +  +
Sbjct: 630 NGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVD 685



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 206/450 (45%), Gaps = 41/450 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS-------------------------- 191
           T+ +VM++LC +   DS   +   M   G +PNS                          
Sbjct: 207 TFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDM 266

Query: 192 ------PMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
                 P ++ F   +    RAG+   A  LL +      +     Y  L++ L +    
Sbjct: 267 FLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQV 326

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD-MGSFGCSPDIVTYNT 301
           DEA  +  +       P+T  +N LI G    G  ++A +  Y+ M   G  PD  T+N 
Sbjct: 327 DEARALLNKI----PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNI 382

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           +I GL +   +    ELL E+  K  F P+V+TYT +I+G+CK G++++A  I N M++ 
Sbjct: 383 MIDGLVKKGYLVSALELLNEMVAK-RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+  + V +N LI    K GN+  A  +   M   G  PD+ TF+SLI+G C+N ++ + 
Sbjct: 442 GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEA 501

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L L  +M  + +  N  T+  L++A    + +  A + + ++ +         YN +I  
Sbjct: 502 LSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKA 561

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G V++   +  EM  K   P  ++  ILI G C  G++ +A+     M+  G  PD
Sbjct: 562 LCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPD 621

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +T NSLI+ L K G   EA  +  +   +
Sbjct: 622 IVTYNSLINGLCKMGHVQEASNLFNKLQSE 651



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 1/293 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++   C+ G  +    + + M + G   N+      + +  + G  + A  L  + 
Sbjct: 414 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                    + +NSL+N L K +  +EA+ ++ + F      +T T+N L+        +
Sbjct: 474 SGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSI 533

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++AF+   +M   GC  D +TYN LI  LC+   V +G  L +E+  K  F P +++   
Sbjct: 534 QQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF-PTIISCNI 592

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG C+ GK++ A     +M   G+ P  VT+N LI+G  K+G++  A  +  ++ S G
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             PD +T+++LI  +C  G  N    L  +       PN  T++ILIN + K+
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705



 Score = 39.7 bits (91), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 11/106 (10%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            LKFL+   ++  L     TYN ++  LC+MG       +F+ ++S+G  P++      +
Sbjct: 606 ALKFLQ-DMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664

Query: 199 SSCIRAGKCDAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           S     G  + A     KG+ S F P EVT S      L+N +VK+
Sbjct: 665 SRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSI-----LINYIVKK 705


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 182/340 (53%), Gaps = 6/340 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P  VT     ++SL+N L  ++    A+  F E      QP+  T+N +I+G  +IG+
Sbjct: 150 FEPDAVT-----FSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGK 204

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A      M   G  PDIV YNT+I GLC+   V+   ++  E+K K    PDV TY+
Sbjct: 205 TTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKG-VRPDVFTYS 263

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++ G C   + ++A+ ++NEM S  I P  VTFN+L+D   K G +  A+ + + M+  
Sbjct: 264 ILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEK 323

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+  T++SL++GYC   ++ +   + D M  K   PNV ++ ILIN  CK  R+++A
Sbjct: 324 GVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEA 383

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R    ++ +  L+P  F YN +I G C+AG   EA  +  +M+ + C PD VT TIL+  
Sbjct: 384 RELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDS 443

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            C  G +  A+ +F  M      P+ +T + LI  + K G
Sbjct: 444 LCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 197/397 (49%), Gaps = 2/397 (0%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           F++M     LP     +  +S+ +R         L  +     +    F +N L+N   +
Sbjct: 72  FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
               D A  +  +  +L  +PD  TF+ LI GL    +  +A EFF +M + G  P++ T
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YNT+I G C++ +      LLK++  K+   PD+V Y ++I G CK   + +A  I++E+
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMD-KAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEI 250

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G++P   T+++L+ G         A  +   M+S   +PDVVTF+ L+D  C+ G L
Sbjct: 251 KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++   +   M  K + PN  T+  L+N  C +N++ +AR     +     +P    YN +
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNIL 370

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I+G+CKA  +DEA  +  EM  +   P+   +  LI G C  GR  EA  +F  M   GC
Sbjct: 371 INGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGC 430

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           +PD +T   L+  L K G  + A R+  RA +D  L+
Sbjct: 431 SPDLVTCTILLDSLCKLGYLDNALRLF-RAMQDSCLK 466



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 174/330 (52%), Gaps = 1/330 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
            N ++A++ F      +  P    F+ L+  L RI            +       D+  +
Sbjct: 63  TNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHF 122

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N LI+   R+  V     +L ++  K  F PD VT++S+I+G C   K  +A   ++EM 
Sbjct: 123 NILINCFSRLQRVDFAFSVLGKI-IKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           + G +P+  T+N +I GF K+G    A  + ++M   G  PD+V ++++IDG C++  ++
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L +  E+KGK + P+V+T++IL++ LC  ++  +A     ++   +++P    +N ++
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G + EA  I+  M EK  +P+  T+  L+ G+C++ ++ EA  +F+ M+  GC 
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           P+ ++ N LI+   K    +EA  +    S
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMS 391



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 171/331 (51%), Gaps = 1/331 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++  LC           FD M + G+ PN       +    + GK   A GLL + 
Sbjct: 156 TFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM 215

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     +YN++++ L K     EA+ +F E      +PD +T++IL+ GL    + 
Sbjct: 216 DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQK 275

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F +M S    PD+VT+N L+  LC+   ++    ++K +  +    P+  TY S
Sbjct: 276 EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIK-IMIEKGVEPNYATYNS 334

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYC   K+ +A  +++ M + G  P+ V++N+LI+G+ K   +  A  + + M   G
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+   +++LI G C+ G+  +  +L  +M+ +  SP++ T TIL+++LCK   L++A 
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNAL 454

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           R  + ++ + L P    Y+ +I    K+G +
Sbjct: 455 RLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 35/259 (13%)

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C L  ++ A   +N M      P  V F+ L+    ++ +  +   + +R+       DV
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
             F+ LI+ + R  +++    +  ++      P+  TF+ LIN LC E++   A  F  +
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGN----------------------------------- 487
           +  +   P    YN +I GFCK G                                    
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           V EA  I +E++ K  +PD  T++IL+ G C   +  EA ++FN+M+ +   PD +T N 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           L+  L K GM +EA  I++
Sbjct: 300 LVDKLCKEGMLSEAQGIIK 318



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 75/160 (46%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           ++ TYN +M   C        ++VFD M + G +PN       ++   +A + D A+ L 
Sbjct: 328 NYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELF 387

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  +TF YN+L++ L +     EA  +FK+       PD  T  IL+  L ++
Sbjct: 388 DEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKL 447

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           G +  A   F  M      P++VTY+ LI  + +  ++ R
Sbjct: 448 GYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 216/436 (49%), Gaps = 2/436 (0%)

Query: 138 LGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           +GL F    ++  L    S  T+N ++  LC  G         DY+ S G+ P       
Sbjct: 155 VGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTM 214

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            V+   + GK  AA   + +    +       Y+ ++++L K    +EAV +F     + 
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG 274

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             P   T+N LI G+   G+ K+A   F +M  +   PD+VT++ L+  LC+   V    
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEAL 334

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            +  ++  +    PD+VTY+S+I G CK     +++ + NEM S  I+P  VTF++ +D 
Sbjct: 335 SVFGKM-IQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDV 393

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G +  A+ +   M+  G  P+VVT++SL+DGYC + Q+++  K+ D M  K  +P+
Sbjct: 394 FCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           V ++ ILI   CK  R+++A++   ++    L P    +  +I G C+AG    A  +  
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFK 513

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +M    C PD +T++ L+ G C  G + EA+++F  + +    P+ +    L+  + K G
Sbjct: 514 KMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAG 573

Query: 557 MPNEAFRIMQRASEDQ 572
              +A  +    S ++
Sbjct: 574 KLEDAKELFSSLSIEE 589



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 195/384 (50%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++  LC++G   +  V    M      P        + S  +    + A  L    
Sbjct: 211 THTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM 270

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   ++ +   YNSL+  +       +A  +FKE      +PD  TF+IL+  L + G V
Sbjct: 271 RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVV 330

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M      PDIVTY++LI G+C+ +       LL E+       PDVVT++ 
Sbjct: 331 LEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM-LSRNIRPDVVTFSI 389

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +  +CK G + +A  I N M   G++P+ VT+N L+DG+     M  A  + + M++ G
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV++++ LI GYC++ ++++  +L DEM  K L+PN  T T LI+ LC+  R   A+
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K++  +   P    Y+ ++ GFCK G++DEA  +   +++ + KP+ V   IL+ G 
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGM 569

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
           C  G++ +A  +F+ +      PD
Sbjct: 570 CKAGKLEDAKELFSSLSIEELQPD 593



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 5/223 (2%)

Query: 343 CKLGKM---DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           CK G     D A   +N+M      P    FN L+    ++ +  S   +  +M  FG  
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
             V T + LI+  C    +  G  +  ++      P++ TF  LIN LC E R+ +A   
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L  +      P  + +  +++G CK G    A V + +M E  C+P+ V+++I+I   C 
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLC- 255

Query: 520 KGRMV-EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           K R+V EA+ +F  M  IG +P  +T NSLI  +   G   +A
Sbjct: 256 KNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQA 298



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 75/193 (38%), Gaps = 35/193 (18%)

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
           G   N   A     +M+     P +  F+ L+    R    +  + +  +M+   +S +V
Sbjct: 80  GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           YT TILIN LC                           + V  GF   G + +       
Sbjct: 140 YTLTILINCLCH-------------------------LHLVGLGFSVLGKIFKLGF---- 170

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
                 KP  +TF  LI G C++GR+VEA+   + ++  G  P   T   +++ L K G 
Sbjct: 171 ------KPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGK 224

Query: 558 PNEAFRIMQRASE 570
            + A   M++  E
Sbjct: 225 TSAAIVWMKKMVE 237


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 209/410 (50%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++  +++ LC  G       +FD M  +G  P+  +    ++   + G   AA  LL   
Sbjct: 146 SFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM 205

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G       +Y +L+++L K     +A  +F E       P+  T N L+  L  +GE 
Sbjct: 206 EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEW 265

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K       +M      P+ ++  T++  LC+   VA+ H+++ ++ F+S   PDVVTYT+
Sbjct: 266 KHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVV-DMMFQSGVEPDVVTYTA 324

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C   +MD+A  +++ M   G  P+  ++N LI+G+ K+  M  A Y+ E M    
Sbjct: 325 LIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK 384

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+ VT+++LI G C  G+L   + L  EM      P++ T+ IL++ LCK   L+ A 
Sbjct: 385 LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAM 444

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK ++ ++L P   +Y  VIDG C+AG +++A  + + +  K  KP+  T+ I+  G 
Sbjct: 445 ALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGL 504

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +G + EA  +F +M    C+ D  T N++    L+    + A ++++ 
Sbjct: 505 CKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEE 554



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 206/423 (48%), Gaps = 11/423 (2%)

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           H+  T N+++ S C +   +    V   +   G  P++      +      G+   A  L
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166

Query: 214 LSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
             +     F+P  V     +Y +L+N L K  +   A+ + +   +   QPD   +  LI
Sbjct: 167 FDKMIWEGFQPDVV-----IYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             L +  +  +AF  F +M + G SP+IVT N+L+  LC + E    + LL E+   S+ 
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM-VDSKI 280

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+ ++ T+V+   CK G + +A  + + M   G++P  VT+  LIDG      M  A  
Sbjct: 281 MPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVK 340

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M+  G  P+V ++++LI+GYC+  ++++ + L +EM  + L PN  T+  LI+ LC
Sbjct: 341 VFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLC 400

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              RL DA    +++     +P    Y  ++D  CK  ++D+A  ++  +E     PD  
Sbjct: 401 HVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQ 460

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            +TI+I G C  G + +A  +F+ +   G  P+  T N +   L K G+ +EA ++    
Sbjct: 461 IYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEM 520

Query: 569 SED 571
            E+
Sbjct: 521 DEN 523



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 161/325 (49%), Gaps = 1/325 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           + ++N   +  +  N  D+A+  F     ++  P    F  ++  ++++           
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M SFG   ++ T N LI+  C +N V     +L ++  K    PD  ++T++I G C  
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKI-LKLGCQPDTASFTTLIKGLCLE 157

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G++ +A  ++++M   G +P  V +  LI+G  K G+  +A  +   M      PDVV +
Sbjct: 158 GQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVY 217

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
            +LI   C++ Q  Q   L  EM  K +SPN+ T   L+ ALC           L ++  
Sbjct: 218 GTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVD 277

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           + ++P       V+D  CK G V +A+ +V  M +   +PD VT+T LI GHC++  M E
Sbjct: 278 SKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDE 337

Query: 526 AISIFNKMLRIGCAPDDITVNSLIS 550
           A+ +F+ M+  GCAP+  + N+LI+
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLIN 362



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 139/306 (45%), Gaps = 1/306 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N ++ +LC +G    V  + + M     +PN+  +   V +  + G    A  ++   
Sbjct: 251 TCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMM 310

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      Y +L++    ++  DEAV +F         P+ +++N LI G  +I  +
Sbjct: 311 FQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERM 370

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA   F +M      P+ VTYNTLI GLC V  +     L +E+    +  PD+VTY  
Sbjct: 371 DKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQI-PDLVTYRI 429

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK   +DKA  +   +    + P    + ++IDG  + G +  A  +   + S G
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ +  G C+ G L++  KL  EM     S +  T+  +     + N  + A 
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAI 549

Query: 458 RFLKQL 463
           + L+++
Sbjct: 550 QLLEEM 555



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 11/267 (4%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           +NTL   L   N +   H             P +V +  +++   K+ +      +  +M
Sbjct: 52  FNTLDDALSSFNRMLHMHP-----------PPSIVDFAKILTSITKVKRYSTVLSLSRKM 100

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
           +S GI  +  T NVLI+ F  +  +  A  +  ++L  G  PD  +F++LI G C  GQ+
Sbjct: 101 DSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQI 160

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + L L D+M  +   P+V  +  LIN LCK    + A R L+ ++  +  P   +Y  +
Sbjct: 161 GEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTL 220

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I   CK     +A  + +EM  K   P+ VT   L+   C  G      ++ N+M+    
Sbjct: 221 IHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKI 280

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIM 565
            P+ I++ +++  L K GM  +A  ++
Sbjct: 281 MPNAISLTTVVDALCKEGMVAQAHDVV 307



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 103/217 (47%)

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           S Y     +D A   +N M      PS V F  ++    KV    +   +  +M SFG  
Sbjct: 47  SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIP 106

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            +V T + LI+ +C   ++N    +  ++      P+  +FT LI  LC E ++ +A   
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++ W    P   +Y  +I+G CK G+   A  ++  ME+  C+PD V +  LI   C 
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK 226

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             +  +A ++F++M+  G +P+ +T NSL+  L   G
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLG 263



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 5/210 (2%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           I+R+D  K    F E  R  L  N    TYN ++  LC +G       +F  M + G +P
Sbjct: 367 IERMD--KAMYLFEEMCRQKLIPNTV--TYNTLIHGLCHVGRLQDAIALFREMVACGQIP 422

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +       +    +    D A  LL       +     +Y  +++ + +    ++A  +F
Sbjct: 423 DLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLF 482

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
                   +P+ WT+NI+  GL + G + +A + F +M    CS D  TYNT+  G  R 
Sbjct: 483 SNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRN 542

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           NE +R  +LL+E+  +  FS DV T T ++
Sbjct: 543 NETSRAIQLLEEMLARG-FSCDVSTTTLLV 571



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 1/164 (0%)

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y     L+  L   + M   +  P++  F  ++ ++ K  R +      +++    +   
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            +  N +I+ FC    V+ A  ++A++ +  C+PD  +FT LI G C++G++ EA+ +F+
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           KM+  G  PD +   +LI+ L K G  + A R++ R+ E  N Q
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL-RSMEKGNCQ 211



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 39/175 (22%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
            LD     LK +E S    +L+   + Y +V+  +C  G  +  + +F  + S G  PN 
Sbjct: 439 HLDKAMALLKAIEGS----NLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN- 493

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                                              + YN + + L K+   DEA  +F E
Sbjct: 494 ----------------------------------VWTYNIMTHGLCKRGLLDEATKLFME 519

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
                   D  T+N + QG  R  E  +A +   +M + G S D+ T   L+  L
Sbjct: 520 MDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGML 574


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 218/411 (53%), Gaps = 4/411 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK--CDAAKGLLS 215
            +++  + L E GL +  +  FD + + G   ++     +++ C+ + +        + S
Sbjct: 41  VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT-CLSSKRDMLGMVLKVFS 99

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +F    V  +T  YN L+N+L +     EA ++          PD  ++  +I G   +G
Sbjct: 100 EFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVG 159

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E++K  +   +M   G  P++ TY+++I  LC+  +V  G ++L+E+  +  F PD V Y
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVF-PDHVIY 218

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+CKLG    A  +++EM +  I P ++ F+ LI G    G +V A+ +   M+ 
Sbjct: 219 TTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIK 278

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G+ PD VT+++LIDGYC+ G++ +   L ++M    L+PNV T+T L + LCK   L+ 
Sbjct: 279 KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDT 338

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L ++    L      YN +++G CKAGN+ +A  ++ EM+E    PD +T+T L+ 
Sbjct: 339 ANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMD 398

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +   G MV+A  +  +ML  G  P  +T N L++ L   G   +  R+++
Sbjct: 399 AYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 187/380 (49%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+ G     + V   M   G  P+  +    +    + G   AA  L S+ 
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E+   +  +++L+  L       EA  +F E  +   +PD  T+  LI G  ++GE+
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEM 301

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           KKAF     M   G +P++VTY  L  GLC+  E+   +ELL E+  K     ++ TY +
Sbjct: 302 KKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG-LQLNISTYNT 360

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK G + +A  +  EM   G+ P  +T+  L+D + K G MV A  +   ML  G
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVTF+ L++G C +G+L  G +L   M  K + PN  T+  ++   C  N +  + 
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +    +VP    YN +I G CKA N+ EA  +  EM EKR      ++  LI G 
Sbjct: 481 EIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGF 540

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             + +++EA  +F +M R G
Sbjct: 541 FKRKKLLEARQLFEEMRREG 560



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 216/443 (48%), Gaps = 4/443 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F EF ++ +  N   ++YN++M SL  +G       +   M   G +P+       +   
Sbjct: 98  FSEFPQLGVCWNT--ESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G+      L+ + +   +  + + Y+S++  L K     E   + +E  +    PD 
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             +  LI G  ++G  + A++ F +M +    PD + ++ LI GL    +V    +L  E
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K  F PD VTYT++I GYCKLG+M KA  ++N+M   G+ P+ VT+  L DG  K G
Sbjct: 276 M-IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSG 334

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            + +A  +   M   G   ++ T++++++G C+ G + Q +KL +EMK   L P+  T+T
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYT 394

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L++A  K   +  AR  L+++    L P    +N +++G C +G +++   ++  M EK
Sbjct: 395 TLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEK 454

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              P+  T+  ++  +C++  M  +  I+  M   G  PD  T N LI    K     EA
Sbjct: 455 GIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEA 514

Query: 562 FRIMQRASEDQ-NLQLPSWKKAV 583
           + + +   E + NL   S+   +
Sbjct: 515 WFLHKEMVEKRFNLTASSYNALI 537


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 211/415 (50%), Gaps = 6/415 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N V+   C +        + D M   G  PN     + +    +  + D A+ LLS+ 
Sbjct: 282 TFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV 341

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            PG    +   +N+L+N  V+    +EA  +++ +       PD +TF+ L+ GL + G 
Sbjct: 342 -PGP---NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGL 397

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A E   DM + GC P++ TY  LI G C+  ++     +L+E+  K  FS + V Y 
Sbjct: 398 FGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG-FSLNTVGYN 456

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++IS  CK GK+ +A  ++ EM+S G KP   TFN LI G  +V  M  A  +   M+  
Sbjct: 457 ALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE 516

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G + + VTF++LI  + R G++ + LKL ++M  +    +  T+  LI ALCK   +   
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKG 576

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +++    L P     N +I+GFC AG V  A   + +M  +   PD VT+  LI G
Sbjct: 577 LGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLING 636

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            C +GR+ EA+++F K+   G  PD IT N+LI  L + G  ++A  ++ R  E+
Sbjct: 637 LCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVEN 691



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 209/443 (47%), Gaps = 31/443 (6%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           SF++YN+V+  L           VF  M S G  PN       + +     + D A  LL
Sbjct: 174 SFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                     ++ +Y +L++AL K++  DEA+ + +E F +   PD  TFN +I G  R+
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRL 293

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK----------- 323
             V +  +    M   G +P+ +TY  L+ GLC+   +     LL +V            
Sbjct: 294 NRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLV 353

Query: 324 --------------------FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                                 + + PDV T++++++G CK G    A  + N+M++ G 
Sbjct: 354 NGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGC 413

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP+  T+ +LIDGF K G +  A  +   ML+ G+  + V +++LI   C++G++++ L 
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALD 473

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +  EM  K   P+++TF  LI  LC+ + + DA    + +    ++     +N +I  F 
Sbjct: 474 MFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFL 533

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           + G + EA  +V +M  + C  D++T+  LI   C  G + + + +F +M+R G  P  I
Sbjct: 534 RRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSII 593

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
           T N LI+     G  + A   M+
Sbjct: 594 TCNILINGFCTAGKVHNALEFMR 616



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 184/342 (53%), Gaps = 5/342 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++  LC+ GL  S   + + M + G  PN       +    + G+ + A  +L + 
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +++T  YN+L++AL K     EA+ MF E      +PD +TFN LI GL R+ E+
Sbjct: 444 LTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEM 503

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP-DVVTYT 336
           + A   + DM   G   + VT+NTLI    R  E+    +L+ ++ F+    P D +TY 
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG--CPLDEITYN 561

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLS 395
            +I   CK G ++K  G++ EM   G+ PS +T N+LI+GF   G + +A E+MR+ M+ 
Sbjct: 562 GLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRD-MIH 620

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G+ PD+VT++SLI+G C+ G++ + L L ++++ + + P+  T+  LI  LC+E   +D
Sbjct: 621 RGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDD 680

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           A   L +   N  VP    +N ++  F K  N +   +  A+
Sbjct: 681 ACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYAQ 722



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 160/339 (47%), Gaps = 34/339 (10%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           F ++++   R G   +A     DM G + C P   +YN ++  L   N  +    +  ++
Sbjct: 142 FILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDM 201

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K   SP+  T+  V+   C + ++D A  +  +M   G  P+++ +  LID   K   
Sbjct: 202 LSKG-VSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  + E M   G  PDV TF+++I G+CR  ++ +G KL D M  K  +PN  T+  
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320

Query: 443 LINALCKENRLNDARRFLKQLKW--------------------------------NDLVP 470
           L++ LCK  R+++A+  L ++                                  N  VP
Sbjct: 321 LMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
             F ++ +++G CK G    A  +V +M+ K CKP+  T+TILI G C KG++ EA  I 
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            +ML  G + + +  N+LIS L K G  +EA  +    S
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 210/396 (53%), Gaps = 1/396 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +++ LC  G      +  D + + G   +       +    + G+  AA  LL + 
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV 188

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  MY+++++ + K  + ++A  ++ E       P+  T++ LI G   +G++
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A + F  M      PD+ T+N L+ G C+  ++  G  +   +  K    P+VVTY S
Sbjct: 249 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF-AMMMKQGIKPNVVTYCS 307

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC + +++KA  I   M+  G+ P   ++N+LIDGF K+  +  A  + + M    
Sbjct: 308 LMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 367

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PDVVT++SLIDG C+ G+++  LKL DEM  + + P++ T++ +++ALCK ++++ A 
Sbjct: 368 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 427

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L +LK   + P  + Y  +IDG CK G +++A+ I  ++  K       T+T++I G 
Sbjct: 428 ALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 487

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           C KG   EA+++ +KM    C PD +T   +I  L 
Sbjct: 488 CNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLF 523



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 176/318 (55%), Gaps = 2/318 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P+T TF  LI+GL   G++ +A  F  ++ + G   D V Y TLI GLC+V E     +
Sbjct: 124 HPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALD 183

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           LL+ V   +   P+VV Y+++I G CK   ++ A  +Y+EM S GI P+ VT++ LI GF
Sbjct: 184 LLRRVD-GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 242

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             VG +  A  +  +M+     PDV TF+ L+DG+C++G++ +G  +   M  + + PNV
Sbjct: 243 FTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV 302

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  L++  C    +N A+  L  +    + P    YN +IDGFCK   VDEA  +  E
Sbjct: 303 VTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKE 362

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K   PD VT+  LI G C  G++  A+ + ++M   G  PD IT +S++  L K   
Sbjct: 363 MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 422

Query: 558 PNEAFRIMQRASEDQNLQ 575
            ++A  ++ +  +DQ ++
Sbjct: 423 VDKAIALLTKL-KDQGIR 439



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 186/353 (52%), Gaps = 6/353 (1%)

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L  + P  +T +T     L+  L  +    +A+        +  Q D   +  LI GL +
Sbjct: 120 LMGYHPNTITFTT-----LIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCK 174

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +GE + A +    +      P++V Y+T+I G+C+   V    +L  E+  K   SP+VV
Sbjct: 175 VGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG-ISPNVV 233

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+++ISG+  +G++  A  ++N+M    IKP   TFN+L+DGF K G M   + +   M
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 293

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  P+VVT+ SL+DGYC   ++N+   +   M  + ++P++ ++ ILI+  CK  ++
Sbjct: 294 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKV 353

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A    K++    ++P    YN +IDG CK G +  A  +V EM ++   PD +T++ +
Sbjct: 354 DEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 413

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +   C   ++ +AI++  K+   G  P+  T   LI  L KGG   +A  I +
Sbjct: 414 LDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFE 466



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 157/333 (47%), Gaps = 1/333 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++  +C+    +    ++  M S G  PN       +S     G+   A  L ++  
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    + +N L++   K     E   +F    +   +P+  T+  L+ G   + EV 
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVN 319

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA    Y M   G +PDI +YN LI G C++ +V     L KE+  K    PDVVTY S+
Sbjct: 320 KAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK-HIIPDVVTYNSL 378

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CKLGK+  A  + +EM+  G+ P  +T++ ++D   K   +  A  +  ++   G 
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P++ T++ LIDG C+ G+L     + +++  K  +  V T+T++I+  C +   ++A  
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALA 498

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
            L ++K N  +P    Y  +I         D+A
Sbjct: 499 LLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA 531



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 160/310 (51%), Gaps = 10/310 (3%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY+ ++     +G L D++ + F+ M  +   P+       V    + GK    K + + 
Sbjct: 234 TYSALISGFFTVGQLKDAIDL-FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAM 292

Query: 217 FRPGEVTMSTFMYNSLLNA--LVKQ-NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
                +  +   Y SL++   LVK+ N A   +Y   +       PD  ++NILI G  +
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRG---VNPDIQSYNILIDGFCK 349

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           I +V +A   F +M      PD+VTYN+LI GLC++ +++   +L+ E+  +    PD++
Sbjct: 350 IKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG-VPPDII 408

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+S++   CK  ++DKA  +  ++   GI+P+  T+ +LIDG  K G +  A  + E +
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL 468

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           L  GY   V T++ +I G+C  G  ++ L L  +MK  +  P+  T+ I+I +L  ++  
Sbjct: 469 LVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE- 527

Query: 454 NDARRFLKQL 463
           ND    L+++
Sbjct: 528 NDKAEKLREM 537



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 1/200 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N   ++YN+++   C++   D    +F  M     +P+       +    + GK   A 
Sbjct: 333 VNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYAL 392

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L+ +     V      Y+S+L+AL K +  D+A+ +  +      +P+ +T+ ILI GL
Sbjct: 393 KLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G ++ A   F D+   G +  + TY  +I G C          LL ++K  S   PD
Sbjct: 453 CKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCI-PD 511

Query: 332 VVTYTSVISGYCKLGKMDKA 351
            VTY  +I       + DKA
Sbjct: 512 AVTYEIIIRSLFDKDENDKA 531


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 239/509 (46%), Gaps = 75/509 (14%)

Query: 120 KLSP--LNSLEVIKRLDNPKLGLKFLEFSRV--NLSLNHSFKTYNLVMRSLCEMGLHDSV 175
           +LSP   N   +++ L +  L  K +E  R      +  +  TYN ++ S C+ G     
Sbjct: 194 RLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQG 253

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
             +   M+  G  PN       ++   + G+ + AKGL+ +     + +S + YN L+  
Sbjct: 254 LDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYG 313

Query: 236 LVKQNNADEAVYMFKEYF----------------------RLYSQ-------------PD 260
              +    EA+ + +E                        R+                PD
Sbjct: 314 YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPD 373

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             ++N LI G  R+G + KAF  F ++ S    P IVTYNTL+ GLCR  E+    +L  
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK---------------- 364
           E+      +PD+VTYT +++G CK+G +  A   ++EM   G++                
Sbjct: 434 EM-INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 365 -------------------PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
                              P  + +NV++DG  K+GN+  A  + ++M+S G +PD VT+
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +S+I  +  NG+L +G ++  EM  K L+P+V T+T+LI+    + RL  A  +  +++ 
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             ++P    YN +I+G CK   +D+A    AEM EK   P+K ++TILI  +C  G   E
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLK 554
           A+S++ +ML  G  PD  T ++L+  L K
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 206/450 (45%), Gaps = 50/450 (11%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S K  +L++    +  + +    VFD M      P+       V +C R  +    K L+
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPD-------VKNCNRILRILRDKDLM 215

Query: 215 SQFRPGEVTMSTF-------MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           S+      TM  F        YN+LL++  K     + + +  E  R    P+  T+N+L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GLS+ GE ++A     +M   G      TYN LI G      +A    L +E+  K  
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SP V TY S I G CKLG+M  A    ++M +  + P  V++N LI G+ ++GN++ A 
Sbjct: 336 -SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + + S    P +VT+++L+DG CR G+L    +L  EM  + ++P++ T+TIL+N  
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 448 CKENRLNDARRFLK--------------------QLKWND---------------LVPKP 472
           CK   L+ A+ F                      +LK  D                 P  
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            +YN V+DG CK GN++EA+ ++ +M      PD VT+T +I  H   GR+ +   IF +
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           ML  G  P  +T   LI      G    AF
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 172/329 (52%), Gaps = 1/329 (0%)

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K++  ++ + +F +  +    PD    N +++ L     + KA E +  MG FG  P IV
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYNTL+   C+  +V +G +LL E++ +   +P+ VTY  +I+G  K G+ ++A G+  E
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQ-RRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G+K SA T+N LI G+   G +  A  ++E M+  G  P V T++S I G C+ G+
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++  ++   +M   NL P+V ++  LI   C+   L  A     +L+   L P    YN 
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG C+ G ++ A  +  EM  +   PD VT+TIL+ G C  G +  A   F++ML  G
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              D     + I   LK G  + AF + +
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQE 503



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 2/319 (0%)

Query: 142 FLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           FL F  + ++ L  +  TYN ++  LC  G  +  Q +   M ++G  P+       V+ 
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             + G    A+    +     + + ++ Y + +   +K  +   A  + +E       PD
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
              +N+++ GL ++G +++A E    M S G  PD VTY ++I        + +G E+  
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+  K   +P VVTYT +I G+   G++++A   ++EM   GI P+ +T+N LI+G  KV
Sbjct: 574 EMLSKG-LTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             M  A      M+  G  P+  +++ LI+  C  G   + L L  +M  + + P+  T 
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTH 692

Query: 441 TILINALCKENRLNDARRF 459
           + L+  L K+ +L   R+ 
Sbjct: 693 SALLKQLGKDCKLQAVRQL 711



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 14/219 (6%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS--FGYLPDVVT------------FSS 407
           G + S   F  +++   +   M SA ++ ER+++     + DV+                
Sbjct: 110 GFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDL 169

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI  Y +   + Q L + D+M    LSP+V     ++  L  ++ ++ A    + +    
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    YN ++D +CK G V +   +++EM+ + C P+ VT+ +LI G   KG   +A 
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +  +ML+ G      T N LI      GM  EA  + +
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQE 328


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 207/401 (51%), Gaps = 1/401 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S ++YN +M  L E G       V+  M+  G  P+       + S    G+  AA  LL
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLL 169

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +         +   Y ++++   K+N   EA ++F E  +    PD  TFN LI  L + 
Sbjct: 170 NNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKK 229

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V+++ + F  +   G  P++ T+N  I GLCR   +     LL+ +      +PDV++
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI-VSEGLTPDVIS 288

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+CK  K+ +A    ++M + G++P+  T+N +I+GF K G M +A+ +    +
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G++PD  T+SSLI+G C +G +N+ + +  E   K    ++  +  L+  L K+  + 
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + +K +  +   P  + YN V++G CK G + +AN I+ +   K C PD  TF  LI
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            G+C +  M +AI I + ML  G  PD IT N+L++ L K 
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 204/405 (50%), Gaps = 12/405 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+ ++ LC  G  D    + + + S+G  P+       +    +  K   A+  L + 
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 218 RPGEVTMSTFMYNSLLNALVK---QNNADEAV--YMFKEYFRLYSQPDTWTFNILIQGLS 272
               V  + F YN+++N   K     NAD+ +   MFK +      PD +T++ LI GL 
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI-----PDEFTYSSLINGLC 367

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
             G++ +A   FY+    G    I+ YNTL+ GL +   V +  +L+K++  +   SPD+
Sbjct: 368 NDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM-MEHGCSPDI 426

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  V++G CK+G +  A GI N+  + G  P   TFN LIDG+ K  NM  A  + + 
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           MLS G  PDV+T+++L++G C+  +L+  +     M  K  +PN+ T+ ILI + CK+ +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFT 511
           +++A    K++K   L P       +I G C  G +D+A  +   +E E +       F 
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           I+I   C K  +  A  +F+KM    CAPD+ T   +I    K G
Sbjct: 607 IMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 193/387 (49%), Gaps = 2/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G+  +   +       G +P+       ++     G  + A  +  + 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S  +YN+L+  L KQ    +A+ + K+       PD WT+N+++ GL ++G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     D  + GC PDI T+NTLI G C+   + +  E+L +       +PDV+TY +
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL-DTMLSHGITPDVITYNT 501

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK  K+D     +  M   G  P+ +T+N+LI+ F K   +  A  + + M + G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRLNDA 456
             PD+VT  +LI G C NG+L++  +L   + K    S +   F I+INA C++  ++ A
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMA 621

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +   ++  +D  P  + Y  +ID +CK GN+D A+  + E   K   P   T   ++  
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDI 543
            C+  R+ EA+ I N M++ G  P+++
Sbjct: 682 LCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 194/387 (50%), Gaps = 1/387 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +FD M   G  P+       +    + G    ++ L S+     V  + F +N  +  L 
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           ++   DEA  + +        PD  ++N LI G  +  ++ +A  + + M + G  P+  
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYNT+I+G C+   +    ++L++  FK  F PD  TY+S+I+G C  G M++A  ++ E
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKG-FIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
               G K S + +N L+ G  K G ++ A  + + M+  G  PD+ T++ +++G C+ G 
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L+    + ++   K   P+++TF  LI+  CK+  ++ A   L  +  + + P    YN 
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +++G CKA  +D        M EK C P+ +T+ ILI   C   ++ EA+ +F +M   G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRI 564
             PD +T+ +LI  L   G  ++A+ +
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 217/454 (47%), Gaps = 12/454 (2%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           L P +   VI+  ++P   LK     +      H+ +TY  ++  L   GLH   + + D
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKL---GLHGKFEAMED 61

Query: 181 YMRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            +       +S M+E      +R     GK   A  +  +    +   S   YN+++N L
Sbjct: 62  VLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNIL 121

Query: 237 VKQNNADEA--VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           V+     +A  VYM  +   +Y  PD +T  I ++     G    A     +M   GC  
Sbjct: 122 VEYGYFSQAHKVYMRMKDIGIY--PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF 179

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + V+Y  +ISG  + N     + L  E+  K    PD++T+  +I   CK G + ++  +
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEM-LKQGICPDILTFNKLIHVLCKKGNVQESEKL 238

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           ++++   G+ P+  TFN+ I G  + G +  A  + E ++S G  PDV+++++LI G+C+
Sbjct: 239 FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           + +L +      +M    + PN +T+  +IN  CK   + +A + L+   +   +P  F 
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +I+G C  G+++ A  +  E  EK  K   + +  L+ G   +G +++A+ +   M+
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
             GC+PD  T N +++ L K G  ++A  I+  A
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDA 452



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 180/373 (48%), Gaps = 1/373 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ G     + +F  +   G  PN      F+    R G  D A  LL   
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T     YN+L+    K +   EA     +      +P+ +T+N +I G  + G +
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A +   D    G  PD  TY++LI+GLC   ++ R   +  E   K  F   ++ Y +
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNT 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G  K G + +A  +  +M   G  P   T+N++++G  K+G +  A  +    ++ G
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD+ TF++LIDGYC+   +++ +++ D M    ++P+V T+  L+N LCK  +L++  
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +      P    YN +I+ FCK   V EA  +  EM+ +   PD VT   LI G 
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576

Query: 518 CMKGRMVEAISIF 530
           C  G + +A  +F
Sbjct: 577 CSNGELDKAYELF 589



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 154/304 (50%), Gaps = 1/304 (0%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +++   R G+V++A   F  M  + C P + +YN +++ L      ++ H++   +K   
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            + PDV T+T  +  +C  G+   A  + N M   G + +AV++  +I GF K    + A
Sbjct: 142 IY-PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
            ++ + ML  G  PD++TF+ LI   C+ G + +  KL  ++  + + PN++TF I I  
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LC++  +++A R L+ +    L P    YN +I GFCK   + EA   + +M     +P+
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           + T+  +I G C  G M  A  I    +  G  PD+ T +SLI+ L   G  N A  +  
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 567 RASE 570
            A E
Sbjct: 381 EAME 384



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 157/320 (49%), Gaps = 4/320 (1%)

Query: 154 HSFKTYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           HS   YN +++ L + GL   ++Q++ D M   G  P+       V+   + G    A G
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEH-GCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +L+           F +N+L++   KQ N D+A+ +          PD  T+N L+ GL 
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +  ++    + F  M   GC+P+I+TYN LI   C+  +V+   EL KE+K +   +PD+
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG-LTPDI 566

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VT  ++I G C  G++DKA  ++  +        S   FN++I+ F +  N+  AE +  
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFH 626

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M      PD  T+  +ID YC+ G ++       E   K L P+  T   ++N LC  +
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686

Query: 452 RLNDARRFLKQLKWNDLVPK 471
           RL++A   +  +  N +VP+
Sbjct: 687 RLSEAVVIINLMVQNGIVPE 706


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 203/410 (49%), Gaps = 1/410 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + LS   S  TYN ++ +L E G    V+ +   M ++G +P        +   +++ + 
Sbjct: 306 MRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQV 365

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +AA+   ++ R   +      YNS+LN   K  N  EA+++  +  R    P   T+N L
Sbjct: 366 EAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTL 425

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  R+G +++A     +M   GC PD+ TY  L++G  +V  +    E   E+  K  
Sbjct: 426 IDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKG- 484

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD   Y + I     LG   KA  +   M   GI P  VT+NV+IDG  K GN+  A+
Sbjct: 485 LQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 544

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            ++ +M+S G  PD +T++ LI  +C  G L++  KL + M    L P+V T+TILI+  
Sbjct: 545 DLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTC 604

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+   L  A  + +++    + P    YN +I   C+ G    A     EM E+   P+K
Sbjct: 605 CRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNK 664

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
            T+T+LI G+C +G   +AI ++ +M + G  PD  T N+L     KG M
Sbjct: 665 YTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGHM 714



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 214/454 (47%), Gaps = 39/454 (8%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAG 205
           + L +  +  TYN ++ S  + G  D   ++   M + G   L N       +S   R G
Sbjct: 235 LQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREG 294

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             + A  L+   R  +   S+F YN L+ AL+++    +   +  E       P   T+N
Sbjct: 295 HLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYN 353

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            +I GL +  +V+ A   F +M + G  PD++TYN++++G C+   +     LL +++ +
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLR-R 412

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-- 383
           +  +P V+TY ++I GYC+LG +++A  +  EM   G  P   T+ +L++G  KV N+  
Sbjct: 413 AGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPM 472

Query: 384 -----------------------VSAEY----------MRERMLSFGYLPDVVTFSSLID 410
                                  + AE           +RE M+  G  PD VT++ +ID
Sbjct: 473 AREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIID 532

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G C+ G L     L  +M    L P+  T+T LI+A C+   L++AR+ L  +  + L P
Sbjct: 533 GLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQP 592

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  +I   C+ GN+  A     +M +   +P+++T+ +LI   C  GR + A   F
Sbjct: 593 SVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHF 652

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ++ML  G AP+  T   LI    + G   +A R+
Sbjct: 653 HEMLERGLAPNKYTYTLLIDGNCREGNWADAIRL 686



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 187/395 (47%), Gaps = 46/395 (11%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP---- 259
           A + D  + +  +    E+  +   YN+LL++ +K+   DEA  + KE   + +Q     
Sbjct: 221 AARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKE---METQGGGCL 277

Query: 260 -DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            +  T+N++I  L+R G ++ A +    M          TYN LI+ L     V +   L
Sbjct: 278 LNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEAL 336

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             E++ +    P +VTY ++I G  K  +++ A   + EM + G+ P  +T+N +++G+ 
Sbjct: 337 QMEMENEG-IMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYC 395

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K GN+  A ++   +   G  P V+T+++LIDGYCR G L +  +L +EM  +   P+V 
Sbjct: 396 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVC 455

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP--------------------- 477
           T+TIL+N   K   L  AR F  ++    L P  F YN                      
Sbjct: 456 TYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVM 515

Query: 478 --------------VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                         +IDG CK GN+ +A  +  +M     +PD +T+T LI  HC +G +
Sbjct: 516 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLL 575

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLI-SCLLKGGM 557
            EA  + N M+  G  P  +T   LI +C  +G +
Sbjct: 576 SEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNL 610



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 2/309 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD    N +++ L            + +M      P IVTYNTL+    +         L
Sbjct: 206 PDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASML 265

Query: 319 LKEVKFKSEFS-PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           LKE++ +      + VTY  VIS   + G ++ A  + + M     K S+ T+N LI   
Sbjct: 266 LKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKASSFTYNPLITAL 324

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G +   E ++  M + G +P +VT++++I G  ++ Q+        EM+   L P++
Sbjct: 325 LERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDL 384

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  ++N  CK   L +A   L  L+   L P    YN +IDG+C+ G ++EA  +  E
Sbjct: 385 ITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEE 444

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M E+ C PD  T+TIL+ G      +  A   F++ML  G  PD    N+ I   L  G 
Sbjct: 445 MVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 504

Query: 558 PNEAFRIMQ 566
            ++AF++ +
Sbjct: 505 THKAFQLRE 513



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 3/245 (1%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +PDV     V+       + D    +Y EM    I+P+ VT+N L+D F K G    A  
Sbjct: 205 APDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASM 264

Query: 389 MRERMLS--FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + + M +   G L + VT++ +I    R G L    KL D M+    + + +T+  LI A
Sbjct: 265 LLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASS-FTYNPLITA 323

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           L +   +        +++   ++P    YN +I G  K+  V+ A +  AEM      PD
Sbjct: 324 LLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPD 383

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +T+  ++ G+C  G + EA+ +   + R G AP  +T N+LI    + G   EA R+ +
Sbjct: 384 LITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKE 443

Query: 567 RASED 571
              E 
Sbjct: 444 EMVEQ 448



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 102/238 (42%), Gaps = 38/238 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G     + +   M SDG  P+         +C+    C+  +GLLS+ 
Sbjct: 526 TYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDC-----ITYTCLIHAHCE--RGLLSEA 578

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R             LLN +V                    QP   T+ ILI    R G +
Sbjct: 579 R------------KLLNGMVSDG----------------LQPSVVTYTILIHTCCRRGNL 610

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+ +F  M   G  P+ +TYN LI  LCR       +    E+  +   +P+  TYT 
Sbjct: 611 YSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEM-LERGLAPNKYTYTL 669

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERML 394
           +I G C+ G    A  +Y EM+  GI P   T N L  GF K G+M  A EY+   +L
Sbjct: 670 LIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK-GHMYHAIEYLENIVL 726



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 5/207 (2%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+ P     N ++              +   ML     P +VT+++L+D + + G+ ++ 
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 422 LKLCDEM--KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             L  EM  +G     N  T+ ++I+ L +E  L +A + +  ++ +      F YNP+I
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA-SSFTYNPLI 321

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGC 538
               + G V +   +  EME +   P  VT+  +I G  +K   VEA  + F +M  +G 
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHG-LLKSEQVEAAQLKFAEMRAMGL 380

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIM 565
            PD IT NS+++   K G   EA  ++
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLL 407



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 71/165 (43%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K L+   V+  L     TY  ++ + CE GL    + + + M SDG  P+       + +
Sbjct: 544 KDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHT 603

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           C R G   +A G   +     +  +   YN L++AL +      A + F E       P+
Sbjct: 604 CCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPN 663

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
            +T+ +LI G  R G    A   +++M   G  PD  T+N L  G
Sbjct: 664 KYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 708


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 180/348 (51%), Gaps = 38/348 (10%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+ +T+ ILI+G S  G++  A +   +M S G   + V + TL+ GLC    V    E 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            +      + +PDV+TYT+++   CK GK D+A G+  EM + G  P  VTF+ LIDG  
Sbjct: 67  FR--AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 379 KVGNMVSA-------------------EYMRERM-----------------LSFGYLPDV 402
           K G+   A                   E + +R+                 ++ G+ P V
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           + F+ +I+G+C+   L+   KL + M  K   PNV+TFTILI  LCK NR+ +A++ L++
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +      P    Y+ VI+G CK G VD+A  +   ME + C P+ VT  ILI G C   R
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + EA  ++++M   GCAPD IT NSLI  L K    +EAF++ Q   E
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPE 352



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 193/401 (48%), Gaps = 43/401 (10%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           +PN       +     AG  D A  LL + +      +  ++ +L+  L       EA+ 
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL- 64

Query: 248 MFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
              E+FR  ++   PD  T+  L+  L + G+  +A     +M + GC+PD VT++TLI 
Sbjct: 65  ---EHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLID 121

Query: 305 GLCRVNEVARGHELLKEV---------------------KFKS--------------EFS 329
           GLC+     +   +L++V                     K+ S               F+
Sbjct: 122 GLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFT 181

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V+ +  VI+G+CK   +D A  +   M   G  P+  TF +LI G  K   +  A+ +
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E+M++ G  P+VVT+S++I+G C+ GQ++   +L   M+ +N  PNV T  ILI+ LCK
Sbjct: 242 LEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK-PDKV 508
             R+ +AR+   +++     P    YN +IDG CK+  VDEA  +   + E      + V
Sbjct: 302 AKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 361

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           T++ L  G+   GRM +A  IF+ ++  G +PD  T  SLI
Sbjct: 362 TYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 204/418 (48%), Gaps = 9/418 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +NLV+   C+    DS   + + M   G +PN       ++   +A +   A+ LL +  
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
            G  + +   Y++++N L KQ   D+A  +F+   R    P+  T NILI GL +   ++
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 306

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A + ++ M   GC+PDI+TYN+LI GLC+  +V    +L + +      + + VTY+++
Sbjct: 307 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 366

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
             GY  LG+M  A  I++ +   G  P   T+  LI  + K    V    + E M S G+
Sbjct: 367 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 426

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P V T S+++ G        + ++L D M  +  + +   + +++  + + ++ N A  
Sbjct: 427 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALA 486

Query: 459 FLKQL------KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            L+Q+      K+N   P     + +++  C+ G  D+A  ++ +M E+       ++  
Sbjct: 487 VLEQVIDKRDRKFN---PSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNG 543

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           L+ G     R  EA  +F  M+  G AP+  TVN +IS L      ++A+ ++QR S+
Sbjct: 544 LLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 601



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 217/502 (43%), Gaps = 82/502 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL--LS 215
           TY +++R     G  D    + + M+S+G   N+      V + +  G CDA + +  L 
Sbjct: 11  TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNA-----VVHTTLMKGLCDAGRVVEALE 65

Query: 216 QFRP--GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
            FR    +       Y +L++AL K    DEA  M +E       PDT TF+ LI GL +
Sbjct: 66  HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC-RVNEVARGHELLKEVKFKSEFSPDV 332
            G  ++AF    D+   G       + T+I  LC + N V    ++L  V  K  F+P V
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG-FTPTV 184

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           + +  VI+G+CK   +D A  +   M   G  P+  TF +LI G  K   +  A+ + E+
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M++ G  P+VVT+S++I+G C+ GQ++   +L   M+ +N  PNV T  ILI+ LCK  R
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE------------ 500
           + +AR+   +++     P    YN +IDG CK+  VDEA  +   + E            
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364

Query: 501 ------------------------KRCKPDKVTFTILIIGHCMKGRMV------------ 524
                                   K   PD  T+T LI+ +C   R V            
Sbjct: 365 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 424

Query: 525 -----------------------EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                                   AI +F+ M   GC  D +  N ++  + +    N+A
Sbjct: 425 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKA 484

Query: 562 FRIMQRASEDQNLQLPSWKKAV 583
             ++++  + ++ +      AV
Sbjct: 485 LAVLEQVIDKRDRKFNPSSSAV 506



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 168/395 (42%), Gaps = 40/395 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC+ G  D    +F  M      PN       +    +A + + A+ L  + 
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 315

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL-YSQPDTWTFNILIQGLSRIGE 276
           R          YNSL++ L K    DEA  +F+       S  +  T++ L  G + +G 
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A   F  +   G SPD+ TY +LI   C+ +      EL++E+  K  F P V T +
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG-FPPRVNTLS 434

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK----------------- 379
           +V+ G  +    ++A  +++ M + G    A+ +N++++G  +                 
Sbjct: 435 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDK 494

Query: 380 ---------------------VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                                VG    A+ +  +M   G+   V +++ L+ G  R  + 
Sbjct: 495 RDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRW 554

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++  ++ + M     +P + T  ++I+ LC   +++DA   ++++      P     N +
Sbjct: 555 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTL 614

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           I G+CK+G  D A  ++ EM E   +P+  T  +L
Sbjct: 615 IGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 210/402 (52%), Gaps = 3/402 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S ++YN +M  L E G       V+  M+  G  P+       + S    G+  AA  LL
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLL 169

Query: 215 SQFRPGE-VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           +   PG+    +   Y ++++   K+N   EA ++F E  +    PD  TFN LI  L +
Sbjct: 170 NNM-PGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G V+++ + F  +   G  P++ T+N  I GLCR   +     LL+ +      +PDV+
Sbjct: 229 KGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI-VSEGLTPDVI 287

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y ++I G+CK  K+ +A    ++M + G++P+  T+N +I+GF K G M +A+ +    
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G++PD  T+SSLI+G C +G +N+ + +  E   K    ++  +  L+  L K+  +
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A + +K +  +   P  + YN V++G CK G + +AN I+ +   K C PD  TF  L
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           I G+C +  M +AI I + ML  G  PD IT N+L++ L K 
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 204/405 (50%), Gaps = 12/405 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+ ++ LC  G  D    + + + S+G  P+       +    +  K   A+  L + 
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 218 RPGEVTMSTFMYNSLLNALVK---QNNADEAV--YMFKEYFRLYSQPDTWTFNILIQGLS 272
               V  + F YN+++N   K     NAD+ +   MFK +      PD +T++ LI GL 
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI-----PDEFTYSSLINGLC 367

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
             G++ +A   FY+    G    I+ YNTL+ GL +   V +  +L+K++  +   SPD+
Sbjct: 368 NDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM-MEHGCSPDI 426

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  V++G CK+G +  A GI N+  + G  P   TFN LIDG+ K  NM  A  + + 
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           MLS G  PDV+T+++L++G C+  +L+  +     M  K  +PN+ T+ ILI + CK+ +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFT 511
           +++A    K++K   L P       +I G C  G +D+A  +   +E E +       F 
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           I+I   C K  +  A  +F+KM    CAPD+ T   +I    K G
Sbjct: 607 IMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 192/387 (49%), Gaps = 2/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G+  +   +       G +P+       ++     G  + A  +  + 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S  +YN+L+  L KQ    +A+ + K+       PD WT+N+++ GL ++G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     D  + GC PDI T+NTLI G C+   + +  E+L +       +PDV+TY +
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL-DTMLSHGITPDVITYNT 501

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK  K+D     +  M   G  P+ +T+N+LI+ F K   +  A  + + M + G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRLNDA 456
             PD+VT  +LI G C NG+L++  +L   + K    S +   F I+INA C +  ++ A
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMA 621

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +   ++  +D  P  + Y  +ID +CK GN+D A+  + E   K   P   T   ++  
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDI 543
            C+  R+ EA+ I N M++ G  P+++
Sbjct: 682 LCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 194/387 (50%), Gaps = 1/387 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +FD M   G  P+       +    + G    ++ L S+     V  + F +N  +  L 
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           ++   DEA  + +        PD  ++N LI G  +  ++ +A  + + M + G  P+  
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYNT+I+G C+   +    ++L++  FK  F PD  TY+S+I+G C  G M++A  ++ E
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKG-FIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
               G K S + +N L+ G  K G ++ A  + + M+  G  PD+ T++ +++G C+ G 
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L+    + ++   K   P+++TF  LI+  CK+  ++ A   L  +  + + P    YN 
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +++G CKA  +D        M EK C P+ +T+ ILI   C   ++ EA+ +F +M   G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRI 564
             PD +T+ +LI  L   G  ++A+ +
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 217/454 (47%), Gaps = 12/454 (2%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           L P +   VI+  ++P   LK     +      H+ +TY  ++  L   GLH   + + D
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKL---GLHGKFEAMED 61

Query: 181 YMRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            +       +S M+E      +R     GK   A  +  +    +   S   YN+++N L
Sbjct: 62  VLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNIL 121

Query: 237 VKQNNADEA--VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           V+     +A  VYM  +   +Y  PD +T  I ++     G    A     +M   GC  
Sbjct: 122 VEYGYFSQAHKVYMRMKDIGIY--PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEF 179

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + V+Y  +ISG  + N     + L  E+  K    PD++T+  +I   CK G + ++  +
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEM-LKQGICPDILTFNKLIHVLCKKGNVQESEKL 238

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           ++++   G+ P+  TFN+ I G  + G +  A  + E ++S G  PDV+++++LI G+C+
Sbjct: 239 FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           + +L +      +M    + PN +T+  +IN  CK   + +A + L+   +   +P  F 
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +I+G C  G+++ A  +  E  EK  K   + +  L+ G   +G +++A+ +   M+
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
             GC+PD  T N +++ L K G  ++A  I+  A
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDA 452



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 180/373 (48%), Gaps = 1/373 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ G     + +F  +   G  PN      F+    R G  D A  LL   
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T     YN+L+    K +   EA     +      +P+ +T+N +I G  + G +
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A +   D    G  PD  TY++LI+GLC   ++ R   +  E   K  F   ++ Y +
Sbjct: 338 QNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNT 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G  K G + +A  +  +M   G  P   T+N++++G  K+G +  A  +    ++ G
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD+ TF++LIDGYC+   +++ +++ D M    ++P+V T+  L+N LCK  +L++  
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +      P    YN +I+ FCK   V EA  +  EM+ +   PD VT   LI G 
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576

Query: 518 CMKGRMVEAISIF 530
           C  G + +A  +F
Sbjct: 577 CSNGELDKAYELF 589



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 154/304 (50%), Gaps = 1/304 (0%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +++   R G+V++A   F  M  + C P + +YN +++ L      ++ H++   +K   
Sbjct: 82  IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            + PDV T+T  +  +C  G+   A  + N M   G + +AV++  +I GF K    + A
Sbjct: 142 IY-PDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
            ++ + ML  G  PD++TF+ LI   C+ G + +  KL  ++  + + PN++TF I I  
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LC++  +++A R L+ +    L P    YN +I GFCK   + EA   + +M     +P+
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           + T+  +I G C  G M  A  I    +  G  PD+ T +SLI+ L   G  N A  +  
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 567 RASE 570
            A E
Sbjct: 381 EAME 384



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 4/320 (1%)

Query: 154 HSFKTYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           HS   YN +++ L + GL   ++Q++ D M   G  P+       V+   + G    A G
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEH-GCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +L+           F +N+L++   KQ N D+A+ +          PD  T+N L+ GL 
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +  ++    + F  M   GC+P+I+TYN LI   C+  +V+   EL KE+K +   +PD+
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG-LTPDI 566

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VT  ++I G C  G++DKA  ++  +        S   FN++I+ F    N+  AE +  
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFH 626

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M      PD  T+  +ID YC+ G ++       E   K L P+  T   ++N LC  +
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686

Query: 452 RLNDARRFLKQLKWNDLVPK 471
           RL++A   +  +  N +VP+
Sbjct: 687 RLSEAVVIINLMVQNGIVPE 706


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 211/415 (50%), Gaps = 11/415 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T  +V+ S C +   D    V   +   GH P++      V      GK   A  +  + 
Sbjct: 93  TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 152

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P  VT     Y +L+N L K     EA+ +F E       PD +T+N LI  L 
Sbjct: 153 VGEGFQPNVVT-----YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALC 207

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            + E K       +M      P++V+ N ++  LC+  +V   H+++ ++  +    PDV
Sbjct: 208 NLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVV-DMMIQGGVEPDV 266

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY +++ G+C   +MD+A  +++ M   G   + V++N LI+G+ K+  +  A Y+ E 
Sbjct: 267 VTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE 326

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M     +P+ +T+S+LI G C  G+L   + L +EM      PN+ T++IL++ LCK +R
Sbjct: 327 MCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHR 386

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L +A   LK ++ ++L P   +YN  IDG C+AG+++ A  + + +  +  +PD  T  I
Sbjct: 387 LAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNI 446

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +I G C +G + EA  +F +M   GC  +  T N++   LL+    + A ++++ 
Sbjct: 447 MIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEE 501



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 201/408 (49%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++R LC +G       VFD M  +G  PN       ++   +  +   A  L S+ 
Sbjct: 128 TFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEM 187

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++   F YNSL++AL           +  E  +    P+  + NI++  L + G+V
Sbjct: 188 IAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKV 247

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +    M   G  PD+VTY  L+ G C  +E+    ++  ++  ++    +VV+Y +
Sbjct: 248 TEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVF-DMMVRNGCVCNVVSYNT 306

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK+ ++DKA  ++ EM    + P+ +T++ LI G   VG +  A  +   M++ G
Sbjct: 307 LINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACG 366

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P++VT+S L+D  C+N +L + + L   ++G NL P+V  + I I+ +C+   L  AR
Sbjct: 367 QIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAAR 426

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    L P  + +N +I G CK G +DEA+ +  EM+E  C  +  T+  +  G 
Sbjct: 427 DLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGL 486

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
               +   AI +  +ML  G + D  T   L+  L   G+     +I+
Sbjct: 487 LQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 195/424 (45%), Gaps = 38/424 (8%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P+ EF   ++S  +         L  +     +    +    ++N+    N  D A+
Sbjct: 52  PPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFAL 111

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  +L  QPDT TF  L++GL  +G++ +A + F  M   G  P++VTY TL++GL
Sbjct: 112 SVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGL 171

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+  ++     L  E+  K   SPD+ TY S+I   C L +    T + NEM    I P+
Sbjct: 172 CKDRQLTEALNLFSEMIAKG-ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPN 230

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS-------------------- 406
            V+ N+++D   K G +  A  + + M+  G  PDVVT++                    
Sbjct: 231 VVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFD 290

Query: 407 ---------------SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
                          +LI+GYC+  ++++ + L +EM  + L PN  T++ LI+ LC   
Sbjct: 291 MMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVG 350

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           RL DA     ++     +P    Y+ ++D  CK   + EA  ++  +E     PD   + 
Sbjct: 351 RLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYN 410

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           I I G C  G +  A  +F+ +   G  PD  T N +I  L K G+ +EA ++ +   E+
Sbjct: 411 IAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDEN 470

Query: 572 QNLQ 575
             L+
Sbjct: 471 GCLR 474



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 173/370 (46%), Gaps = 37/370 (10%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D+A+  F     ++  P  + F  L+  ++++            M SFG  PD+ T 
Sbjct: 35  NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
             +I+  C +N V     +L ++  K    PD  T+T+++ G C +GK+ +A  ++++M 
Sbjct: 95  TIVINSFCHLNRVDFALSVLAKI-LKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P+ VT+  L++G  K   +  A  +   M++ G  PD+ T++SLI   C   +  
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR---------------------- 457
               L +EM    + PNV +  I+++ALCKE ++ +A                       
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273

Query: 458 -------------RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
                        +    +  N  V     YN +I+G+CK   +D+A  +  EM  +   
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P+ +T++ LI G C  GR+ +AI++FN+M+  G  P+ +T + L+  L K     EA  +
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393

Query: 565 MQRASEDQNL 574
           + +A E  NL
Sbjct: 394 L-KAIEGSNL 402


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 203/401 (50%), Gaps = 2/401 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G  +    +   M + G  PNS      +    R      A  LL + 
Sbjct: 370 TYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 429

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   Y +++N L    +   A  + ++      +P+   ++ILI   +  G +
Sbjct: 430 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRI 489

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   G +PDI  YN +IS L +  ++      L E++ +    PD VT+ +
Sbjct: 490 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG-LKPDAVTFGA 548

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I GY K GKM +A   ++EM   G+ P+   + VLI+G  K GN++ A  +  R+ + G
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV T S+ I G  +NG++ + LK+  E+K K L P+V+T++ LI+  CK+  +  A 
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    + P  F+YN ++DG CK+G++  A  +   M EK  +PD VT++ +I G+
Sbjct: 669 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI-SCLLKGGM 557
           C    + EA S+F++M   G  P     N+L+  C  +G M
Sbjct: 729 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 204/392 (52%), Gaps = 2/392 (0%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           FD M   G +PN+P+    ++   +AG    A  +  +     V       ++ ++ L+K
Sbjct: 566 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLK 625

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                EA+ +F E       PD +T++ LI G  + GEV+KAFE   +M   G +P+I  
Sbjct: 626 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 685

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YN L+ GLC+  ++ R  +L   +  K    PD VTY+++I GYCK   + +A  +++EM
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
            S G++P +  +N L+ G  K G+M  A  +   ML  G+    ++F++LIDGYC++ ++
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 803

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            +  +L  EM  K + P+  T+T +I+  CK  ++ +A    K+++  +L+     Y  +
Sbjct: 804 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 863

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           + G+ K G   E   +  +M  K  KPD+VT+ ++I  HC +  +VEA  + ++++  G 
Sbjct: 864 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                  + LI+ L K     EA +++    E
Sbjct: 924 LTKGTIHDLLITALCKREDLTEASKLLDEMGE 955



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 211/445 (47%), Gaps = 36/445 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +++++ S   MG+ D    VF   ++D  L +       +   ++ G  +    + +  
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++    + Y  L+ AL K  +   A  +  E       P+ + ++++I+G+ ++G++
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E    MG  G  P+  TY  + +GLCR   +       +E++ K+   PD    ++
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQ-KTGLKPDYNACSA 338

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ + G +D+   I + M SCGI  + +T+NVLI G  K G M  A  + + M++ G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN------------------------- 432
             P+  TF  LI+GYCR   + + L+L DEM+ +N                         
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 433 ----------LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                     L PNV  ++ILI A   E R+ +ARR L  +  + + P  F YN +I   
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 518

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            KAG ++EA+  + E++ +  KPD VTF   I+G+   G+M EA   F++ML  G  P++
Sbjct: 519 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 578

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQR 567
                LI+   K G   EA  I +R
Sbjct: 579 PLYTVLINGHFKAGNLMEALSIFRR 603



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 197/413 (47%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ +LC+ G     + V   M   G  PN  +    +    + G  D A  L    
Sbjct: 230 TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +T+ Y  +   L +    +EA   F+E  +   +PD    + LI G  R G++
Sbjct: 290 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 349

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +       M S G   +++TYN LI GLC+  ++ +  E+LK +       P+  T+  
Sbjct: 350 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM-VTLGCKPNSRTFCL 408

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+   M +A  + +EM    + PSAV++  +I+G     ++  A  + E+M   G
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV +S LI  Y   G++ +  +L D M    ++P+++ +  +I+ L K  ++ +A 
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            +L +++   L P    +   I G+ K G + EA     EM +    P+   +T+LI GH
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              G ++EA+SIF ++  +G  PD  T ++ I  LLK G   EA ++     E
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 641



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 188/373 (50%), Gaps = 2/373 (0%)

Query: 178  VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            VF  ++  G +P+       +S   + G+ + A  L  +     +  + F+YN+L++ L 
Sbjct: 635  VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 694

Query: 238  KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
            K  +   A  +F        +PD+ T++ +I G  +   V +AF  F++M S G  P   
Sbjct: 695  KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 754

Query: 298  TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
             YN L+ G C+  ++ +   L +E+  +  F+   +++ ++I GYCK  K+ +A+ ++ E
Sbjct: 755  VYNALVHGCCKEGDMEKAMNLFREM-LQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQE 812

Query: 358  MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
            M +  I P  VT+  +ID   K G M  A  + + M     + D VT++SL+ GY + GQ
Sbjct: 813  MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 872

Query: 418  LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
             ++   L ++M  K + P+  T+ ++I A CKE+ L +A +   ++    ++ K  +++ 
Sbjct: 873  SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 932

Query: 478  VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            +I   CK  ++ EA+ ++ EM E   KP       L+      G+M EA  +F  +  +G
Sbjct: 933  LITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLG 992

Query: 538  CAPDDITVNSLIS 550
              PD  T+  L++
Sbjct: 993  LVPDTTTLIDLVN 1005



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 175/360 (48%), Gaps = 2/360 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY+ ++   C+ G  +    + D M   G  PN  +    V    ++G    A+ L    
Sbjct: 650  TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +   +  Y+++++   K  N  EA  +F E      QP ++ +N L+ G  + G++
Sbjct: 710  PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 769

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +KA   F +M   G +  + ++NTLI G C+  ++    +L +E+  K +  PD VTYT+
Sbjct: 770  EKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAK-QIMPDHVTYTT 827

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            VI  +CK GKM++A  ++ EM    +    VT+  L+ G+ K+G       + E+M++ G
Sbjct: 828  VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              PD VT+  +I  +C+   L +  KL DE+ GK +        +LI ALCK   L +A 
Sbjct: 888  VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 947

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            + L ++    L P     N ++  F +AG +DEA  +   ++     PD  T   L+ G+
Sbjct: 948  KLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGN 1007



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 166/379 (43%), Gaps = 69/379 (18%)

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY-------------------DMGSFGC 292
           +FR Y       F+ILI    R+G + +A   F+                   D+   G 
Sbjct: 149 WFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGM 208

Query: 293 SP----------------DIVTYNTLISGLCRVNEVARGHELLKEVKFK----SEF---- 328
                             D+ TY  L+  LC+  ++     +L E+  K    +EF    
Sbjct: 209 MELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSL 268

Query: 329 --------------------------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                                      P+  TYT + +G C+  +M++A   + EM   G
Sbjct: 269 VIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 328

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +KP     + LIDGF + G++     +++ M+S G   +++T++ LI G C+ G++ +  
Sbjct: 329 LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAA 388

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           ++   M      PN  TF +LI   C+E+ +  A   L +++  +LVP    Y  +I+G 
Sbjct: 389 EILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL 448

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C   ++  AN ++ +M     KP+ V ++ILI+ +  +GR+ EA  + + M   G APD 
Sbjct: 449 CHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDI 508

Query: 543 ITVNSLISCLLKGGMPNEA 561
              N++ISCL K G   EA
Sbjct: 509 FCYNAIISCLSKAGKMEEA 527



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 167/340 (49%), Gaps = 2/340 (0%)

Query: 159  YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            YN ++  LC+ G     + +FD M   G  P+S      +    ++     A  L  +  
Sbjct: 686  YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745

Query: 219  PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
               V   +F+YN+L++   K+ + ++A+ +F+E  +      T +FN LI G  +  +++
Sbjct: 746  SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-KGFATTLSFNTLIDGYCKSCKIQ 804

Query: 279  KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            +A + F +M +    PD VTY T+I   C+  ++   + L KE++ +     D VTYTS+
Sbjct: 805  EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ-ERNLIVDTVTYTSL 863

Query: 339  ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
            + GY KLG+  +   ++ +M + G+KP  VT+ ++I    K  N+V A  +R+ ++  G 
Sbjct: 864  MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 399  LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            L        LI   C+   L +  KL DEM    L P++     L+ +  +  ++++A R
Sbjct: 924  LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATR 983

Query: 459  FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
              + +K   LVP       +++G     + ++A  ++ ++
Sbjct: 984  VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 212/416 (50%), Gaps = 6/416 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +T+N V+  LC+    +    + + M   G  P+     + ++   + G+ DAAK L  +
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIG 275
               E+ +    +N+L++  V     D+A  +  +    Y   PD  T+N LI G  + G
Sbjct: 348 IPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V  A E  +DM + GC P++ +Y  L+ G C++ ++   + +L E+       P+ V +
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS-ADGLKPNTVGF 462

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +IS +CK  ++ +A  I+ EM   G KP   TFN LI G  +V  +  A ++   M+S
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G + + VT+++LI+ + R G++ +  KL +EM  +    +  T+  LI  LC+   ++ 
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           AR   +++  +   P     N +I+G C++G V+EA     EM  +   PD VTF  LI 
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G C  GR+ + +++F K+   G  PD +T N+L+S L KGG   +A  ++    ED
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 203/404 (50%), Gaps = 4/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +VM++ C +   DS   +   M   G +PNS + +  + S  +  + + A  LL + 
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +N ++  L K +  +EA  M          PD  T+  L+ GL +IG V
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + FY +      P+IV +NTLI G      +     +L ++       PDV TY S
Sbjct: 339 DAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY K G +  A  + ++M + G KP+  ++ +L+DGF K+G +  A  +   M + G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V F+ LI  +C+  ++ + +++  EM  K   P+VYTF  LI+ LC+ + +  A 
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +    +V     YN +I+ F + G + EA  +V EM  +    D++T+  LI G 
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C  G + +A S+F KMLR G AP +I+ N LI+ L + GM  EA
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 221/483 (45%), Gaps = 40/483 (8%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
            K++P    ++++   N    ++   ++       HSF  Y +++  L   G   ++  +
Sbjct: 74  HKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRL 133

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM-YNSLLNALV 237
              M+ +G +    +    +    +AG       L+ + R       TF  YN +L  LV
Sbjct: 134 LIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV 193

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
             N    A  +F +       P  +TF ++++    + E+  A     DM   GC P+ V
Sbjct: 194 SGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSV 253

Query: 298 TYNTLISGLCRVNEVARGHELLKEV--------------------KFK------------ 325
            Y TLI  L + N V    +LL+E+                    KF             
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313

Query: 326 --SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
               F+PD +TY  +++G CK+G++D A  ++  +     KP  V FN LI GF   G +
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRL 369

Query: 384 VSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
             A+ +   M+ S+G +PDV T++SLI GY + G +   L++  +M+ K   PNVY++TI
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L++  CK  ++++A   L ++  + L P    +N +I  FCK   + EA  I  EM  K 
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           CKPD  TF  LI G C    +  A+ +   M+  G   + +T N+LI+  L+ G   EA 
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549

Query: 563 RIM 565
           +++
Sbjct: 550 KLV 552



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 204/408 (50%), Gaps = 14/408 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           TY  +M  LC++G  D+ + +F        +P   ++ F   +   +  G+ D AK +LS
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLF------YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLS 377

Query: 216 QFRPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  +      YNSL+    K+     A+ +  +      +P+ +++ IL+ G  ++
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++ +A+    +M + G  P+ V +N LIS  C+ + +    E+ +E+  K    PDV T
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYT 496

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           + S+ISG C++ ++  A  +  +M S G+  + VT+N LI+ F + G +  A  +   M+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   D +T++SLI G CR G++++   L ++M     +P+  +  ILIN LC+   + 
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A  F K++      P    +N +I+G C+AG +++   +  +++ +   PD VTF  L+
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              C  G + +A  + ++ +  G  P+  T     S LL+  +P E  
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRT----WSILLQSIIPQETL 720



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 158/338 (46%), Gaps = 39/338 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + GL      V   MR+ G  PN       V    + GK D A  +L++ 
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +T  +N L++A  K++   EAV +F+E  R   +PD +TFN LI GL  + E+
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP-DVVTYT 336
           K A     DM S G   + VTYNTLI+   R  E+    +L+ E+ F+   SP D +TY 
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG--SPLDEITYN 568

Query: 337 SVISGYCKLGKMDKATGIYNEM---------NSCGI------------------------ 363
           S+I G C+ G++DKA  ++ +M          SC I                        
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628

Query: 364 --KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
              P  VTFN LI+G  + G +     M  ++ + G  PD VTF++L+   C+ G +   
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
             L DE       PN  T++IL+ ++  +  L D RRF
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQETL-DRRRF 725



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 290 FGCSPDIVTYNT----LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           + C P   +YN     L+SG C        +++L       +  P + T+  V+  +C +
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-----KIPPTLFTFGVVMKAFCAV 230

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            ++D A  +  +M   G  P++V +  LI    K   +  A  + E M   G +PD  TF
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           + +I G C+  ++N+  K+ + M  +  +P+  T+  L+N LCK  R++ A+    +   
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR--- 347

Query: 466 NDLVPKP--FMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMKGR 522
              +PKP   ++N +I GF   G +D+A  ++++M       PD  T+  LI G+  +G 
Sbjct: 348 ---IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +  A+ + + M   GC P+  +   L+    K G  +EA+ ++   S D
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 202/357 (56%), Gaps = 10/357 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N LL  L K N+  +   ++ E       PD +T +IL   L  +  V +A      + 
Sbjct: 94  FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGIL 153

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P++VTY TLI GLC  + ++    L   ++ K   +P+ VTY ++I G C+ G +
Sbjct: 154 RRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQ-KLGCTPNAVTYGTLIKGLCQTGNV 212

Query: 349 DKATGIYNEM----NSCGI--KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           + A  ++ EM    +  G+  KP  +T++++IDG  KVG    A+ + E M + G +PDV
Sbjct: 213 NIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDV 272

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           +++S+LI G+C  G+ +Q   L DEM  + + P++ TF++LI+ LCKE ++ +A++ L+ 
Sbjct: 273 ISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEV 332

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    +VP    YN +IDGFC  G+++ A  +   M  K  +PD++++T LI G+C   +
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWK 392

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQL 576
           + EA++++N+ML++G +P+  T  +L+  L + G   +A   F +M+      N Q+
Sbjct: 393 VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQI 449



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 200/403 (49%), Gaps = 7/403 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL------PNSPMIEFFVSSCIRAGKCDAAK 211
           TY  +++ LC+ G  +    +   M +D         P        +    + G+ D AK
Sbjct: 198 TYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAK 257

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  + +   +      Y++L++        D++ ++F E      QPD  TF++LI  L
Sbjct: 258 ELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTL 317

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G+V +A +    M   G  P+++TYN+LI G C V ++    EL   +  K    PD
Sbjct: 318 CKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG-LEPD 376

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            ++YT++I+GYCK  K+ +A  +YNEM   G  P+  T+  L+ G  + G +  A+ +  
Sbjct: 377 EISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFG 436

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M ++G   +   +   +DG C+N  L + ++L +E+K  N   N+  ++ LI+ LCK  
Sbjct: 437 VMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +L  A    ++L    L P    YN +I GFCK G VD AN++  +MEE  C PD + + 
Sbjct: 497 KLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYN 556

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            L+ G C   ++ E I + +KM++   +P+  +   ++  L K
Sbjct: 557 TLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 207/421 (49%), Gaps = 17/421 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL---- 213
           TY  +++ LC          +F  M+  G  PN+      +    + G  + A  L    
Sbjct: 163 TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEM 222

Query: 214 ---LSQF----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
               SQ+    +PG +T     Y+ +++ L K    DEA  +F+E       PD  +++ 
Sbjct: 223 LNDASQYGVNCKPGVIT-----YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYST 277

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI G    G+  ++   F +M   G  PD+VT++ LI  LC+  +V    +LL EV  + 
Sbjct: 278 LIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLL-EVMIQR 336

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              P+++TY S+I G+C +G ++ A  ++  M S G++P  +++  LI+G+ K   +  A
Sbjct: 337 GIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEA 396

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   ML  G  P+V T+ +L+ G  + G++    KL   MK   +S N   + I ++ 
Sbjct: 397 MNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDG 456

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK + L +A     +LK  +       Y+ +IDG CKAG ++ A  +  ++ ++  +PD
Sbjct: 457 LCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPD 516

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            VT+ I+I G C  G++  A  +F KM   GC PD I  N+L+    +G    E  +++ 
Sbjct: 517 VVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLH 576

Query: 567 R 567
           +
Sbjct: 577 K 577



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 198/420 (47%), Gaps = 16/420 (3%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV--FDYMRSDGHLPNSPMIEFFVSSCI 202
           F+R  +S +H     +L +R+ C+ G   ++Q    FD M     +P        +    
Sbjct: 47  FNREEISFHHPL---SLFLRN-CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLA 102

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           +         L ++ R   ++   F  + L N L   N   EA+       R    P+  
Sbjct: 103 KINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVV 162

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+  LI+GL     + +A   F  M   GC+P+ VTY TLI GLC+   V    +L KE+
Sbjct: 163 TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEM 222

Query: 323 -----KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
                ++     P V+TY+ +I G CK+G+ D+A  ++ EM + G+ P  ++++ LI GF
Sbjct: 223 LNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
              G    ++++ + M+  G  PD+VTFS LID  C+ G++ +  KL + M  + + PN+
Sbjct: 283 CCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNL 342

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  LI+  C    LN AR     +    L P    Y  +I+G+CK   V EA  +  E
Sbjct: 343 ITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNE 402

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M +    P+  T+  L+ G   KG++ +A  +F  M   G     ++ NS I  +   G+
Sbjct: 403 MLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG-----VSANSQIYGIFLDGL 457



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 164/314 (52%), Gaps = 10/314 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++ +LC+ G     + + + M   G +PN       +      G  ++A+ L    
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM 368

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +L+N   K     EA+ ++ E  ++   P+  T+  L++GL + G+V
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M ++G S +   Y   + GLC+ + +    EL  E+K    F  ++  Y+ 
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK-SYNFKLNIENYSC 487

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK GK++ A  ++ +++  G++P  VT+N++I GF KVG + +A  + E+M   G
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++ +++L+ G+C   +L + +KL  +M  K++SPN  + TI+++ LCK+ +     
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYK--- 604

Query: 458 RFLKQLKWNDLVPK 471
                 K+ DL+PK
Sbjct: 605 ------KFVDLLPK 612



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 37/195 (18%)

Query: 379 KVGNM--VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           K GN+  + A +  + M+    +P + +F+ L+ G  +    +Q   L +EM+   LSP+
Sbjct: 66  KTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPD 125

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           ++T +IL N LC  NR                                   V EA   +A
Sbjct: 126 LFTLSILANCLCNVNR-----------------------------------VSEALAAMA 150

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            +  +   P+ VT+T LI G CM+ R+ EA  +F +M ++GC P+ +T  +LI  L + G
Sbjct: 151 GILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTG 210

Query: 557 MPNEAFRIMQRASED 571
             N A ++ +    D
Sbjct: 211 NVNIALKLHKEMLND 225


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 205/401 (51%), Gaps = 10/401 (2%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP----GEVTMST 226
           + D+ +VV   MR  G  P+       +   +RA     A  LL + R       ++   
Sbjct: 190 VQDAAEVVL-MMRDRGMAPSIRCCNALLKDLLRAD----AMALLWKVREFMVGAGISPDV 244

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           + Y++L+ A  K    D A  +  E        +T T+N+LI GL R G V++AF F  D
Sbjct: 245 YTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKD 304

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M  +G  PD  TY  LI+GLC+         LL E+   +E  P+VV Y ++I G+ + G
Sbjct: 305 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREG 363

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
             D+A  +  EM + G++P+ +T++ L+ G  K+G M  A  + ++M+   + PD +T++
Sbjct: 364 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            +I+G+ R+       +L  EM+   +SPNVYT++I+I+ LC+      A   L+++   
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            L P  F+Y P+I G+C+ GNV  A  I  +M +    PD   +  LI G    GR+ E+
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              F +M   G  P++ T + LI   LK G    A +++QR
Sbjct: 544 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 584



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 199/440 (45%), Gaps = 36/440 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+    +  + + D M      PN  +    +   +R G  D A  ++ + 
Sbjct: 316 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 375

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y++L+  L K    D A  + K+  R   +PDT T+N++I+G  R    
Sbjct: 376 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 435

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K AF    +M + G SP++ TY+ +I GLC+  E  +  +LL+E+  K    P+   Y  
Sbjct: 436 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG-LKPNAFVYAP 494

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGYC+ G +  A  I+++M    + P    +N LI G  KVG +  +     +M   G
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN--VYT---------------- 439
            LP+  T+S LI GY +NG L    +L   M    L PN  +Y                 
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614

Query: 440 -----------------FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                            + ILI+ L     +  A R L  ++ N  VP   +Y+ +I G 
Sbjct: 615 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 674

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK  + ++A  I+ EM +K   P+ V +  LI G C  G +  A ++FN +L  G  P+ 
Sbjct: 675 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734

Query: 543 ITVNSLISCLLKGGMPNEAF 562
           +T  SLI    K G  + AF
Sbjct: 735 VTYTSLIDGSCKVGDISNAF 754



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 211/439 (48%), Gaps = 2/439 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L+ + R D   L  K  EF  V   ++    TY+ ++ + C++   D+ + V   MR  G
Sbjct: 216 LKDLLRADAMALLWKVREF-MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERG 274

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
              N+      ++   R+G  + A G         +    F Y +L+N L K   ++EA 
Sbjct: 275 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 334

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  E      +P+   +  LI G  R G   +AF+   +M + G  P+ +TY+ L+ GL
Sbjct: 335 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 394

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C++ ++ R   LLK++  +    PD +TY  +I G+ +      A  + +EM + GI P+
Sbjct: 395 CKMGQMDRASLLLKQM-VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 453

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T++++I G  + G    A  + E M + G  P+   ++ LI GYCR G ++   ++ D
Sbjct: 454 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 513

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +M   N+ P++Y +  LI  L K  R+ ++ ++  Q++   L+P  F Y+ +I G+ K G
Sbjct: 514 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 573

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           +++ A  +V  M +   KP+ V +  L+  +     + +  S F  ML  G   D+    
Sbjct: 574 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 633

Query: 547 SLISCLLKGGMPNEAFRIM 565
            LI  L   G    AFR++
Sbjct: 634 ILIHNLSSSGNMEAAFRVL 652



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 213/416 (51%), Gaps = 7/416 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           TYN+++  LC  G   +V+  F +   M   G +P+       ++   ++ + + AK LL
Sbjct: 281 TYNVLIAGLCRSG---AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 337

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    E+  +  +Y +L++  +++ NADEA  M KE      QP+  T++ L++GL ++
Sbjct: 338 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 397

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++ +A      M      PD +TYN +I G  R +       LL E++  +  SP+V T
Sbjct: 398 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEME-NAGISPNVYT 456

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G C+ G+ +KA+ +  EM + G+KP+A  +  LI G+ + GN+  A  + ++M 
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 516

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
               LPD+  ++SLI G  + G++ +  K   +M+ + L PN +T++ LI+   K   L 
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 576

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + ++++    L P   +Y  +++ + K+ ++++ +     M ++    D   + ILI
Sbjct: 577 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                 G M  A  + + + + G  PD    +SLIS L K     +AF I+   S+
Sbjct: 637 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 692



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 201/486 (41%), Gaps = 74/486 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++R LC+MG  D   ++   M  D H P++      +    R      A  LLS+ 
Sbjct: 386 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 445

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ + + Y+ +++ L +    ++A  + +E      +P+ + +  LI G  R G V
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M      PD+  YN+LI GL +V  V    +   +++ +    P+  TY+ 
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG-LLPNEFTYSG 564

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF--------------------------- 370
           +I GY K G ++ A  +   M   G+KP+ V +                           
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 624

Query: 371 --------NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                    +LI      GNM +A  +   +   G +PDV  +SSLI G C+     +  
Sbjct: 625 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + DEM  K + PN+  +  LI+ LCK   ++ AR     +    LVP    Y  +IDG 
Sbjct: 685 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 744

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTI------------------------------ 512
           CK G++  A  +  EM      PD   +++                              
Sbjct: 745 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 804

Query: 513 ----LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---- 564
               L+ G C +G+M E + + + ++  G  P+ +T+ ++IS L + G  +E   I    
Sbjct: 805 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 864

Query: 565 MQRASE 570
            Q+ SE
Sbjct: 865 QQKTSE 870



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 182/380 (47%), Gaps = 4/380 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  L ++G  +     F  M+  G LPN       +   ++ G  ++A+ L+ +  
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +  +Y  LL +  K ++ ++    FK         D   + ILI  LS  G ++
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            AF     +   G  PD+  Y++LISGLC+  +  +   +L E+  K    P++V Y ++
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS-KKGVDPNIVCYNAL 705

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G +  A  ++N + + G+ P+ VT+  LIDG  KVG++ +A Y+   ML+ G 
Sbjct: 706 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 765

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD   +S L  G    G L Q + L +EM  +    ++ +F  L++  CK  ++ +  +
Sbjct: 766 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLK 824

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L  +    LVP       +I G  +AG + E + I  E+++K  +     F+ L +   
Sbjct: 825 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 884

Query: 519 MKGRMVEAISIFNKMLRIGC 538
            +G++   + + + M+R  C
Sbjct: 885 NQGKI--PLDVVDDMIRDHC 902



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 199/425 (46%), Gaps = 28/425 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++    + G  +S + +   M   G  PN  +    + S  ++   +         
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +   +Y  L++ L    N + A  +     +  S PD   ++ LI GL +  + 
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KAF    +M   G  P+IV YN LI GLC+  +++    +   +  K    P+ VTYTS
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG-LVPNCVTYTS 739

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK+G +  A  +YNEM + GI P A  ++VL  G    G++  A ++ E M   G
Sbjct: 740 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +   + +F++L+DG+C+ G++ + LKL   + G+ L PN  T   +I+ L +  +L++  
Sbjct: 800 H-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 858

Query: 458 RFLKQLK--------------WNDLVPKPFMYNPVIDGF----CKAGNVDEA----NVIV 495
               +L+              + D++ +  +   V+D      CK GN+D+A    +VIV
Sbjct: 859 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIV 918

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           A+     C     ++  ++   C KG++ EA+++  +M + G  P +     L++ L   
Sbjct: 919 AKSAPMGCS----SYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTS 974

Query: 556 GMPNE 560
           G   E
Sbjct: 975 GYIQE 979



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 5/262 (1%)

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +A  H  L +   +S    DV+  T     Y K G++  A  +   M   G+ PS    N
Sbjct: 159 LASIHRALSDSGHRSPAVLDVLVDT-----YKKSGRVQDAAEVVLMMRDRGMAPSIRCCN 213

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L+    +   M     +RE M+  G  PDV T+S+LI+ YC+  + +   K+  EM+ +
Sbjct: 214 ALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRER 273

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
               N  T+ +LI  LC+   + +A  F K ++   LVP  F Y  +I+G CK+   +EA
Sbjct: 274 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 333

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++ EM     KP+ V +  LI G   +G   EA  +  +M+  G  P+ IT ++L+  
Sbjct: 334 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 393

Query: 552 LLKGGMPNEAFRIMQRASEDQN 573
           L K G  + A  ++++   D +
Sbjct: 394 LCKMGQMDRASLLLKQMVRDSH 415



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/362 (20%), Positives = 164/362 (45%), Gaps = 24/362 (6%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + Y +++ +L   G  ++   V   +  +G +P+  +    +S   +    + A G+L +
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 689

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +   YN+L++ L K  +   A  +F         P+  T+  LI G  ++G+
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 749

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  AF  + +M + G +PD   Y+ L +G     ++ +   L++E+  +   S  + ++ 
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS--ISSFN 807

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM------------- 383
           +++ G+CK GKM +   + + +   G+ P+A+T   +I G  + G +             
Sbjct: 808 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867

Query: 384 VSAEYMRE------RMLSFGYLP-DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
            S    R        M++ G +P DVV    +I  +C+ G L++ L L D +  K+    
Sbjct: 868 TSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMG 925

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             ++  +++ LC++ +L++A   LK++    + P       ++     +G + E N ++ 
Sbjct: 926 CSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLD 985

Query: 497 EM 498
            M
Sbjct: 986 NM 987



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/293 (19%), Positives = 113/293 (38%), Gaps = 53/293 (18%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+ G     + VF+ + + G +PN       +    + G    A  L ++  
Sbjct: 702 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 761

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +T   F+Y+ L        + ++A+++ +E F L       +FN L+ G  + G+++
Sbjct: 762 ATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF-LRGHASISSFNNLVDGFCKRGKMQ 820

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP-------- 330
           +  +  + +   G  P+ +T   +ISGL    +++  H +  E++ K+  S         
Sbjct: 821 ETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLF 880

Query: 331 -----------DVV---------------------------------TYTSVISGYCKLG 346
                      DVV                                 +Y +++   C+ G
Sbjct: 881 MDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKG 940

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           K+ +A  +  EM+  GI PS     +L+      G +     + + ML   +L
Sbjct: 941 KLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKWL 993


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 223/468 (47%), Gaps = 43/468 (9%)

Query: 145 FSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           + R++L  L   F T N+++   C +   D    V   M   GH PN+      V     
Sbjct: 115 YKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCL 174

Query: 204 AGKCDAAKGLLSQ-----FRPGEVTMSTFM------------------------------ 228
             +   A GLL +     +RP  VT  T +                              
Sbjct: 175 GSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTI 234

Query: 229 ------YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
                 Y +++++L K    D+   +F E       PD   ++ +I G+   G  + A  
Sbjct: 235 KPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKG 294

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
            F +M   G  P++VT+N LI  LC+  ++   + LLK +  + E SPD  TY ++I G+
Sbjct: 295 LFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGE-SPDTFTYNTLIDGF 353

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C  G++D A  ++  M S GI+  AV++NVLI+G+ K G MV A+ +   M+    +P V
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           +T+++L+ G  R G++     L  EMK  +L+P   T+ IL++ LCK N L++A      
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           L+ +D  P   ++N +IDG CKA  ++ A  +   +  +  +P+ +T+T++I G C  G+
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQ 533

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  A  +F  M   GCAP+ +T N+L+    +     +   ++Q  +E
Sbjct: 534 LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAE 581



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 208/420 (49%), Gaps = 7/420 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N ++ ++ ++  +  V  ++  M   G  P+   +   ++      K D    +L + 
Sbjct: 94  SFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEM 153

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +T  + SL+  L   +   EA  + ++  R+  +P+  T+  L+ GL   G  
Sbjct: 154 LRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNT 213

Query: 278 KKAFEFFYDM----GSFGCS--PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
             A +   +M    G FG +  P++V Y T+I  LC+   + +G EL  E+K +   SPD
Sbjct: 214 MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG-ISPD 272

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VV Y+S+I G C  G+ + A G++NEM   G+ P+ VTFNVLID   K G M  A ++ +
Sbjct: 273 VVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLK 332

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G  PD  T+++LIDG+C  G+++    L   M+ K +  +  ++ +LIN  CK  
Sbjct: 333 LMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSG 392

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+ +A++  +++   +++P    YN ++ G  + G V +A  +  EM+     P+  T+ 
Sbjct: 393 RMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYN 452

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           IL+ G C    + EA+ +F+ +      P     N LI  L K      A  +  R S +
Sbjct: 453 ILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHE 512



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 194/387 (50%), Gaps = 45/387 (11%)

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
           P    +  F+ ++  +  +K++   EA  +F     +   P   +FN L+  +++I    
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRS---EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYF 109

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
                +  M   G +PD +T N LI+  C +N+V  G  +L E+  +   SP+ VT+TS+
Sbjct: 110 DVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEM-LRRGHSPNTVTFTSL 168

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS--- 395
           + G C   ++ +ATG+  +M   G +P+ VT+  L++G    GN + A  + E ML+   
Sbjct: 169 VKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNG 228

Query: 396 -FGYL--PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS------------------ 434
            FG    P++V + ++ID  C++G +++G +L  EMKG+ +S                  
Sbjct: 229 GFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGR 288

Query: 435 -----------------PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
                            PNV TF +LI+ALCK  ++ +A   LK +      P  F YN 
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNT 348

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +IDGFC  G +D+A  +   ME K  + D V++ +LI G+C  GRMVEA  ++ +M+   
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRI 564
             P  IT N+L++ L + G   +A+ +
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNL 435



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 192/403 (47%), Gaps = 7/403 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHL-----PNSPMIEFFVSSCIRAGKCDAAK 211
           TY  ++  LC  G    +V++  + +  +G       PN       + S  + G  D  K
Sbjct: 199 TYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGK 258

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  + +   ++     Y+S+++ +      + A  +F E       P+  TFN+LI  L
Sbjct: 259 ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDAL 318

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G++++A      M   G SPD  TYNTLI G C    +    +L   ++ K     D
Sbjct: 319 CKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKG-IETD 377

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            V+Y  +I+GYCK G+M +A  +Y EM    I P+ +T+N L+ G  + G +  A  +  
Sbjct: 378 AVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFG 437

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M      P+  T++ L+DG C+N  L++ ++L   ++  +  P++  F  LI+ LCK  
Sbjct: 438 EMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKAR 497

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++  AR    +L    L P    Y  +I G CK+G ++ A  +   MEEK C P+ VTF 
Sbjct: 498 KIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFN 557

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            L+ G C    M + + +  +M     +PD  T++ ++  L K
Sbjct: 558 TLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 163/322 (50%), Gaps = 1/322 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           G K L    V+  ++ +  T+N+++ +LC+ G  +    +   M   G  P++      +
Sbjct: 291 GAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
                 G+ D A+ L        +      YN L+N   K     EA  +++E       
Sbjct: 351 DGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIM 410

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P   T+N L+ GL R G+V+ A+  F +M     +P+  TYN L+ GLC+ N ++   EL
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
              ++   +F P +  +  +I G CK  K++ A  ++N ++  G++P+ +T+ V+I G  
Sbjct: 471 FHYLE-NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G + +A+ +   M   G  P++VTF++L+ G+C+N ++ + ++L  EM  K+ SP+  
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589

Query: 439 TFTILINALCKENRLNDARRFL 460
           T +I+++ L K+ +  +    L
Sbjct: 590 TISIVVDLLSKDEKYREYLHLL 611



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 43/281 (15%)

Query: 329 SPDVVTYTSVISGYCKLG--KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           +PD     + +   CK G  K  +A  ++N +      P   +FN L+    K+      
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + +RM   G  PD +T + LI+ YC   +++ GL +  EM  +  SPN  TFT L+  
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171

Query: 447 LCKENRLNDARRFLKQL----------KWNDLV--------------------------- 469
           LC  +R+++A   L+++           +  L+                           
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231

Query: 470 ----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    Y  +ID  CK G +D+   +  EM+ +   PD V ++ +I G C  GR   
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           A  +FN+M+  G  P+ +T N LI  L K G   EA  +++
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLK 332


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 231/484 (47%), Gaps = 11/484 (2%)

Query: 93  FWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEV-IKRLDNPKLGLK-----FLEFS 146
           F+ V V   LLL +  L D    Y    L  ++S  + + RL N   G++     F E+S
Sbjct: 187 FFQVLVEAGLLLEAGKLFDKLLNYGV--LVSVDSCNLFLARLSNSFDGIRTAFRVFREYS 244

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
            V +  N    +YN+++  LC++G       +   M   G++P+       V    +  +
Sbjct: 245 EVGVCWNTV--SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQ 302

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
                 L+ + +   +  + + YNS+++ L K     EA  + +        PD   +  
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI G  + G V   ++ F +M      PD VTY ++I GLC+  +V    +L  E+  K 
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD VTYT++I GYCK G+M +A  ++N+M   G+ P+ VT+  L+DG  K G +  A
Sbjct: 423 -LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   M   G  P+V T+++LI+G C+ G + Q +KL +EM      P+  T+T +++A
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK   +  A   L+ +    L P    +N +++GFC +G +++   ++  M +K   P+
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             TF  L+  +C++  M   I I+  M   G  PD  T N LI    K     EA+ + +
Sbjct: 602 ATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHK 661

Query: 567 RASE 570
              E
Sbjct: 662 EMVE 665



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 204/409 (49%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y++++   C++     V  + + ++  G  PN       +S   + G+   A+ +L   
Sbjct: 289 SYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVM 348

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +     +Y +L++   K  N      +F E  R    PD  T+  +I GL + G+V
Sbjct: 349 KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKV 408

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F +M S G  PD VTY  LI G C+  E+     L  ++  K   +P+VVTYT+
Sbjct: 409 VEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG-LTPNVVTYTA 467

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK G++D A  + +EM+  G++P+  T+N LI+G  KVGN+  A  + E M   G
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + PD +T+++++D YC+ G++ +  +L   M  K L P + TF +L+N  C    L D  
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R +K +    ++P    +N ++  +C   N+     I   M  +   PD  T+ ILI GH
Sbjct: 588 RLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGH 647

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C    M EA  +  +M+  G +    + NSLI    K     EA ++ +
Sbjct: 648 CKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFE 696



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 218/432 (50%), Gaps = 13/432 (3%)

Query: 145 FSRVNLSLNHSFK-------TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           F R    L +++K        +++  + L E GL      +FD + + G L +      F
Sbjct: 163 FDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLF 222

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGE---VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           ++    +   D  +     FR      V  +T  YN +L+ L +     EA  +  +   
Sbjct: 223 LARL--SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEF 280

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
             + PD  ++++++ G  ++ ++ K  +   ++   G  P+  TYN++IS LC+   V  
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVE 340

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             ++L+ +K +  F PD V YT++ISG+ K G +     +++EM    I P  VT+  +I
Sbjct: 341 AEQVLRVMKNQRIF-PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMI 399

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G  + G +V A  +   MLS G  PD VT+++LIDGYC+ G++ +   L ++M  K L+
Sbjct: 400 HGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLT 459

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PNV T+T L++ LCK   ++ A   L ++    L P    YN +I+G CK GN+++A  +
Sbjct: 460 PNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKL 519

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           + EM+     PD +T+T ++  +C  G M +A  +   ML  G  P  +T N L++    
Sbjct: 520 MEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCM 579

Query: 555 GGMPNEAFRIMQ 566
            GM  +  R+++
Sbjct: 580 SGMLEDGERLIK 591



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 189/390 (48%), Gaps = 3/390 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  R  L  N    TYN ++  LC+ G     + V   M++    P++ +    +S   +
Sbjct: 312 ELQRKGLKPNQY--TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           +G       L  + +  ++      Y S+++ L +     EA  +F E      +PD  T
Sbjct: 370 SGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVT 429

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  LI G  + GE+K+AF     M   G +P++VTY  L+ GLC+  EV   +ELL E+ 
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    P+V TY ++I+G CK+G +++A  +  EM+  G  P  +T+  ++D + K+G M
Sbjct: 490 EKG-LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEM 548

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +   ML  G  P +VTF+ L++G+C +G L  G +L   M  K + PN  TF  L
Sbjct: 549 AKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           +   C  N +       K +    +VP    YN +I G CKA N+ EA  +  EM EK  
Sbjct: 609 MKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
                ++  LI G   + +  EA  +F +M
Sbjct: 669 SLTAASYNSLIKGFYKRKKFEEARKLFEEM 698



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 168/342 (49%), Gaps = 11/342 (3%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSL 232
           +FD M+    +P+       +    +AGK   A+ L S+      +P EVT     Y +L
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVT-----YTAL 433

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++   K     EA  +  +       P+  T+  L+ GL + GEV  A E  ++M   G 
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P++ TYN LI+GLC+V  + +  +L++E+     F PD +TYT+++  YCK+G+M KA 
Sbjct: 494 QPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG-FFPDTITYTTIMDAYCKMGEMAKAH 552

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +   M   G++P+ VTFNVL++GF   G +   E + + ML  G +P+  TF+SL+  Y
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C    +   +++   M  + + P+  T+ ILI   CK   + +A    K++         
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
             YN +I GF K    +EA  +  EM       +K  + I +
Sbjct: 673 ASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 166/346 (47%), Gaps = 1/346 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F TY  ++  LC+ G     + +F  M S G  P+       +    +AG+   A  L +
Sbjct: 392 FVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHN 451

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           Q     +T +   Y +L++ L K    D A  +  E      QP+  T+N LI GL ++G
Sbjct: 452 QMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVG 511

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +++A +   +M   G  PD +TY T++   C++ E+A+ HELL+ +       P +VT+
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR-IMLDKGLQPTIVTF 570

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +++G+C  G ++    +   M   GI P+A TFN L+  +    NM +   + + M +
Sbjct: 571 NVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHA 630

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G +PD  T++ LI G+C+   + +   L  EM  K  S    ++  LI    K  +  +
Sbjct: 631 QGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEE 690

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           AR+  ++++ +  + +  +Y+  +D   + GN +    +  E  EK
Sbjct: 691 ARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 213/419 (50%), Gaps = 3/419 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           L L  +  T+N ++  LC    + D+V++ FD M   GH P+       ++   + G   
Sbjct: 4   LGLQPTLVTFNTLLSGLCSKAKIMDAVKL-FDEMVKMGHEPDVITYSTIINGLCKMGNTT 62

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL +        +   YN+++++L K     EA+  F E  +    PD +T++ ++
Sbjct: 63  MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G   +G V +A   F  M      P+ VT+  LI GLC+   ++    L+ E   +   
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW-LVFETMTEKGL 181

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV TY +++ GYC   +MD+A  ++N M+  G  P+  ++N+LI+G  K G +  A+ 
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M      PD+ T+S+L+ G+C+ G+  +  +L  EM    L PN+ T++I+++ LC
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K   L++A   LK ++ + + P  F+Y  +I+G C  G ++ A  + + +  K  +P  V
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV 361

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T+T++I G    G   EA  +F +M   GC P+  T N +I   L+ G    A R+++ 
Sbjct: 362 TYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 189/391 (48%), Gaps = 1/391 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+MG       +   M   G  PN       + S  +      A    S+ 
Sbjct: 47  TYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEM 106

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F Y+S+L+        +EA  +FK+       P+  TF ILI GL +   +
Sbjct: 107 VKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMI 166

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+  F  M   G  PD+ TYN L+ G C  +++    +L   +  K   +P+V +Y  
Sbjct: 167 SEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKG-CAPNVRSYNI 225

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+CK G++D+A G+  EM+   + P   T++ L+ GF +VG    A+ + + M S+G
Sbjct: 226 LINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG 285

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+++T+S ++DG C++G L++  +L   M+   + PN++ +TILI  +C   +L  AR
Sbjct: 286 LLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAAR 345

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    Y  +I G  K G  +EA  +  EM    C P+  T+ ++I G 
Sbjct: 346 ELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGF 405

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
              G    A+ +  +M+  G + D  T   L
Sbjct: 406 LRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 177/320 (55%), Gaps = 1/320 (0%)

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
           F+L  QP   TFN L+ GL    ++  A + F +M   G  PD++TY+T+I+GLC++   
Sbjct: 2   FKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNT 61

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               +LLK+++ K    P+VV Y ++I   CK   + +A   ++EM   GI P   T++ 
Sbjct: 62  TMALQLLKKMEEKG-CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           ++ GF  +G +  A  + ++M+    +P+ VTF+ LIDG C+   +++   + + M  K 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L P+VYT+  L++  C  +++++A++    +      P    YN +I+G CK+G +DEA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++AEM  K   PD  T++ L+ G C  GR  EA  +  +M   G  P+ IT + ++  L
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 553 LKGGMPNEAFRIMQRASEDQ 572
            K G  +EAF +++   E +
Sbjct: 301 CKHGHLDEAFELLKAMQESK 320



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 153/281 (54%), Gaps = 1/281 (0%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  P +VT+NTL+SGLC   ++    +L  E+  K    PDV+TY+++I+G CK+G
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEM-VKMGHEPDVITYSTIINGLCKMG 59

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
               A  +  +M   G KP+ V +N +ID   K   +  A      M+  G  PDV T+S
Sbjct: 60  NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           S++ G+C  G++N+   L  +M  +N+ PN  TFTILI+ LCK+  +++A    + +   
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            L P  + YN ++DG+C    +DEA  +   M+ K C P+  ++ ILI GHC  GR+ EA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +  +M      PD  T ++L+    + G P EA  +++ 
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKE 280



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 1/253 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C     D  Q +F+ M   G  PN       ++   ++G+ D AKGLL++ 
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T   F Y++L+    +     EA  + KE       P+  T++I++ GL + G +
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AFE    M      P+I  Y  LI G+C   ++    EL   + F     P VVTYT 
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNL-FVKGIQPTVVTYTV 365

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG  K G  ++A  ++ EM   G  P++ T+NV+I GF + G+  +A  + E M+  G
Sbjct: 366 MISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKG 425

Query: 398 YLPDVVTFSSLID 410
           +  D  TF  L D
Sbjct: 426 FSADSSTFRMLSD 438



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 93/178 (52%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  P +VTF++L+ G C   ++   +KL DEM      P+V T++ +IN LCK   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
              A + LK+++     P    YN +ID  CK   V EA    +EM ++   PD  T++ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++ G C  GR+ EA S+F +M+     P+ +T   LI  L K  M +EA+ + +  +E
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTE 178



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 1/185 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           SL     TY+ +MR  C++G     Q +   M S G LPN       +    + G  D A
Sbjct: 250 SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEA 309

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             LL   +  ++  + F+Y  L+  +      + A  +F   F    QP   T+ ++I G
Sbjct: 310 FELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G   +A E F +M   GC P+  TYN +I G  R  +      L++E+  K  FS 
Sbjct: 370 LLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKG-FSA 428

Query: 331 DVVTY 335
           D  T+
Sbjct: 429 DSSTF 433


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 190/350 (54%), Gaps = 6/350 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  +T++T     L+  L  +    +A++   +   L    +   +  LI GL ++G+
Sbjct: 122 YEPNAITLTT-----LIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A +    +      P++V YNT+I  +C+V  V    +L  E+  K   SPDVVTY+
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG-ISPDVVTYS 235

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++ISG+C LGK++ A G++N+M S  I P   TF++L+DGF K G +  A+ +   M+  
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDVVT+ SL+DGYC   Q+N+   + + M    ++ NV ++ I+IN  CK  ++++A
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               K++   +++P    YN +IDG CK+G +  A  +V EM ++    DK+T+  ++  
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDA 415

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C   ++ +AI++  KM   G  PD  T   LI  L KGG   +A  I +
Sbjct: 416 LCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFE 465



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 223/431 (51%), Gaps = 5/431 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T   +++ LC  G +H ++    D + + G   N       ++   + G+  AA  LL +
Sbjct: 128 TLTTLIKGLCLKGQIHQALHF-HDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRR 186

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +  MYN++++++ K    +EA  ++ E       PD  T++ LI G   +G+
Sbjct: 187 VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGK 246

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A   F  M S   +PD+ T++ L+ G C+   V     +L  +  K    PDVVTY 
Sbjct: 247 LNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL-AMMMKQGIKPDVVTYC 305

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++ GYC + +++KA  I+N M   G+  +  ++N++I+GF K+  +  A  + + M   
Sbjct: 306 SLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCK 365

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             +PDVVT++SLIDG C++G+++  LKL DEM  + +  +  T+  +++ALCK ++++ A
Sbjct: 366 NIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 425

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L ++K   + P  + Y  +IDG CK G + +A  I  ++  K       T+T++I G
Sbjct: 426 IALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
            C      +A+++ +KM   GC P+  T   +I  L +    + A +++ R    + L L
Sbjct: 486 FCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLL-REMIARGL-L 543

Query: 577 PSWKKAVPLRT 587
             WKKA  L T
Sbjct: 544 FGWKKAYCLFT 554



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 178/352 (50%), Gaps = 3/352 (0%)

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           QF   +  +ST +Y+ L +    Q++    V  F     +   P  + F  ++  L +I 
Sbjct: 13  QFPNPKFIISTSLYSQLHHH--HQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKIN 70

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             + A     +M   G + D+VT+N LI+   ++        +   +  K  + P+ +T 
Sbjct: 71  CYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANI-LKKGYEPNAITL 129

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G C  G++ +A   ++++ + G   + V +  LI+G  KVG   +A  +  R+  
Sbjct: 130 TTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDG 189

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               P+VV ++++ID  C+   +N+   L  EM  K +SP+V T++ LI+  C   +LND
Sbjct: 190 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLND 249

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     ++   ++ P  + ++ ++DGFCK G V EA  ++A M ++  KPD VT+  L+ 
Sbjct: 250 AIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMD 309

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           G+C+  ++ +A SIFN M + G   +  + N +I+   K    +EA  + + 
Sbjct: 310 GYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKE 361



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 1/207 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++YN+++   C++   D    +F  M     +P+       +    ++GK   A  L+ +
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V      YNS+L+AL K +  D+A+ +  +      QPD +T+ ILI GL + G 
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K A   F D+   G +  + TY  +I G C  +   +   LL +++  +   P+  TY 
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME-DNGCIPNAKTYE 515

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGI 363
            +I    +  + D A  +  EM + G+
Sbjct: 516 IIILSLFEKDENDMAEKLLREMIARGL 542


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 217/430 (50%), Gaps = 4/430 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F ++++      H+  T N ++      G H     VF         P+       +   
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            +A +   A  LL + +   +T +   + SL+  L + N  D+A+ +F +   +  +PD 
Sbjct: 63  CKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDA 122

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           + + ++I  L +I ++  A  +F  M   GC PD VTY  L+  L +  +  +GH++ +E
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K   SP++VTY +V++GYCK G++D+A  +   +   G  PS   ++ LIDG  K  
Sbjct: 183 MLSKGH-SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD 241

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
               A  + E  ++ G + DV+ ++S I G C+ G+L++   +  +M     +P+  ++ 
Sbjct: 242 RHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYN 299

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           ++I +LCK+NR+++A+  + Q      +P   +   ++DG CK+  V+EA VI+  M E 
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLET 359

Query: 502 RCK-PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
             + P  VT++ +I G C   R+ +A  +  KM R GC PD +T  ++I    K G  +E
Sbjct: 360 GDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419

Query: 561 AFRIMQRASE 570
           A  + QR  E
Sbjct: 420 ARELFQRMHE 429



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 202/411 (49%), Gaps = 4/411 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++R LCE+   D    +F  M      P++ +    +    +  K D A     + 
Sbjct: 89  TFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERM 148

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y  L+++L K    ++   +F+E       P+  T+  ++ G  + G +
Sbjct: 149 VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRI 208

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      +   G SP    Y+TLI GLC+ +      EL +      +   DV+ YTS
Sbjct: 209 DQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQ---DVIVYTS 265

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            ISG CK GK+D+A  ++ +M   G  P  V++NV+I    K   +  A+ + ++ +   
Sbjct: 266 FISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERK 325

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRLNDA 456
            +P V   + L+DG C++ ++ +   + + M +  + +P+V T++ +I+ LCK +RL+DA
Sbjct: 326 CMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDA 385

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L++++    VP    Y  +ID FCK G +DEA  +   M E+ C  D V + ILI G
Sbjct: 386 YVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRG 445

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +C   ++ EAI++  +M   G  P+ +++++++  L K     EA  +M++
Sbjct: 446 YCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEK 496



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 170/348 (48%), Gaps = 41/348 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ SL +    +    +F+ M S GH P        V+   +AG+ D A  L+ + 
Sbjct: 159 TYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRL 218

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIG 275
           +    + S  +Y++L++ L K +  DEA    +E F + +    D   +   I GL + G
Sbjct: 219 KGTGRSPSGSLYSTLIDGLCKHDRHDEA----RELFEMAAGDVQDVIVYTSFISGLCKAG 274

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK---------- 325
           ++ +A      M   GC+PD V+YN +I  LC+ N V+   EL+ +   +          
Sbjct: 275 KLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCT 334

Query: 326 -------------------------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
                                     + +P VVTY++VI G CK  ++D A  +  +M  
Sbjct: 335 VLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRR 394

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G  P  VT+  +ID F KVG +  A  + +RM   G   DVV ++ LI GYCR  ++++
Sbjct: 395 AGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDE 454

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
            + + +EM G+ + PNV + + +++ LCKE+R+ +AR  ++++ +  L
Sbjct: 455 AIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESL 502



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 119/249 (47%)

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           K +  F  +  T  S++  +   G   +A  ++ +      +P   T+  LI GF K   
Sbjct: 8   KARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQ 67

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  +   M + G  P +VTF SLI   C     ++ L++  +M    + P+ + +T+
Sbjct: 68  IPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTV 127

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I  LCK N+L+ A  + +++  +  +P    Y  ++    KA   ++ + I  EM  K 
Sbjct: 128 VIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 187

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             P+ VT+  ++ G+C  GR+ +A+S+  ++   G +P     ++LI  L K    +EA 
Sbjct: 188 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAR 247

Query: 563 RIMQRASED 571
            + + A+ D
Sbjct: 248 ELFEMAAGD 256



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 1/176 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDG-HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            +++  LC+    +   V+ + M   G   P+       +    +A + D A  +L + R
Sbjct: 334 TVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMR 393

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                     Y ++++A  K    DEA  +F+         D   +NILI+G  R  +V 
Sbjct: 394 RAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVD 453

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           +A     +M   G  P++V+ +T++ GLC+ + V     L++++ F+S    D V+
Sbjct: 454 EAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLPDSDPVS 509


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 203/348 (58%), Gaps = 5/348 (1%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+ AL+K+N + +  Y++KE  R   QP+ +TFN++I  L + G++ KA +   DM  +G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 292 CSPDIVTYNTLISGLCRV---NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           CSP++V+YNTLI G C++    ++ +   +LKE+  +++ SP++ T+  +I G+ K   +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM-VENDVSPNLTTFNILIDGFWKDDNL 312

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             +  ++ EM    +KP+ +++N LI+G    G +  A  MR++M+S G  P+++T+++L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G+C+N  L + L +   +KG+   P    + +LI+A CK  +++D     ++++   +
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           VP    YN +I G C+ GN++ A  +  ++  K   PD VTF IL+ G+C KG   +A  
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           +  +M ++G  P  +T N ++    K G    A  +  +  +++ L++
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 185/360 (51%), Gaps = 6/360 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG---KCDAAKGLL 214
           T+N+V+ +LC+ G  +  + V + M+  G  PN       +    + G   K   A  +L
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    +V+ +   +N L++   K +N   ++ +FKE      +P+  ++N LI GL   
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++ +A      M S G  P+++TYN LI+G C+ + +    ++   VK +    P    
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PTTRM 403

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I  YCKLGK+D    +  EM   GI P   T+N LI G  + GN+ +A+ + +++ 
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G LPD+VTF  L++GYCR G+  +   L  EM    L P   T+ I++   CKE  L 
Sbjct: 464 SKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522

Query: 455 DARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            A     Q+ K   L      YN ++ G+ + G +++AN+++ EM EK   P+++T+ I+
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 3/204 (1%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G K SA++   L+    K       EY+ + M+     P+V TF+ +I+  C+ G++N+ 
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCK---ENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
             + ++MK    SPNV ++  LI+  CK     ++  A   LK++  ND+ P    +N +
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           IDGF K  N+  +  +  EM ++  KP+ +++  LI G C  G++ EAIS+ +KM+  G 
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362

Query: 539 APDDITVNSLISCLLKGGMPNEAF 562
            P+ IT N+LI+   K  M  EA 
Sbjct: 363 QPNLITYNALINGFCKNDMLKEAL 386



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 21/247 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+  +      +F  ++  G +P + M    + +  + GK D    L  + 
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIG 275
               +      YN L+  L +  N + A  +F +   L S+  PD  TF+IL++G  R G
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ---LTSKGLPDLVTFHILMEGYCRKG 484

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E +KA     +M   G  P  +TYN ++ G C+   +     +  +++ +     +V +Y
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             ++ GY + GK++ A  + NEM   G+ P+ +T+                E ++E M+ 
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY----------------EIVKEEMVD 588

Query: 396 FGYLPDV 402
            G++PD+
Sbjct: 589 QGFVPDI 595


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 224/438 (51%), Gaps = 24/438 (5%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVV------FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+++  +C      S++V+      ++ M   G + N   +  F       GK + 
Sbjct: 46  YVVYNILIGGICSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEK 105

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +         +  Y+ ++  L   +  ++A  +F+E  R    PD +T+  L+ 
Sbjct: 106 AYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLD 165

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              ++G +++A  +F +M   GC+P++VTY  LI    +  +++R +E+  E+   +   
Sbjct: 166 RFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIF-EMMLSNGCV 224

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI-----------------KPSAVTFNV 372
           P++VTYT++I G+CK G+ +KA  IY  M +  +                 +P+ VT+  
Sbjct: 225 PNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGA 284

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L+DG  K   +  A  + E M   G  P+ + + +LIDG+C+ G+L++  ++  +M G  
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
            SPNVYT++ LI+ L K+ RL+ A + L ++  N   P   +Y  ++DG CK G  DEA 
Sbjct: 345 CSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++  MEEK C P+ VT+T +I G    GR+   + +   M   GCAP+ IT   LI+  
Sbjct: 405 RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHC 464

Query: 553 LKGGMPNEAFRIMQRASE 570
              G+ ++A ++++   +
Sbjct: 465 CAAGLLDDAHKLLEEMKQ 482



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 203/405 (50%), Gaps = 43/405 (10%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNAL 236
           M ++G  P+  +    V +  R+G    A  LL +     ++PG V     +YN L+  +
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYV-----VYNILIGGI 56

Query: 237 VKQNN---------ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
               +         A+ A     E   + ++ +   F    + L  IG+ +KA+    +M
Sbjct: 57  CSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFT---RCLCCIGKFEKAYNVIREM 113

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            S G  PD  TY+ +I  LC  ++V +  +L +E+K ++  +PDV TYT+++  +CK+G 
Sbjct: 114 MSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMK-RNGITPDVYTYTTLLDRFCKVGL 172

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +++A   ++EM   G  P+ VT+  LI  + K   +  A  + E MLS G +P++VT+++
Sbjct: 173 IEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTA 232

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLS-PNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           LIDG+C+ G+  +  ++   MK   +  P+V  +  ++++  KE                
Sbjct: 233 LIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE---------------- 276

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    Y  ++DG CKA  V EA  ++  M  + C+P+++ +  LI G C  G++ EA
Sbjct: 277 ---PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEA 333

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +F KML  GC+P+  T +SLI  L K    + A +++ +  E+
Sbjct: 334 QEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLEN 378



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 199/426 (46%), Gaps = 25/426 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C++GL +  +  FD M+ DG  PN       + + ++  K   A  +    
Sbjct: 159 TYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMM 218

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE-------------YFRLYS----QPD 260
                  +   Y +L++   K    ++A  ++               YFR+      +P+
Sbjct: 219 LSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPN 278

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+  L+ GL +  +VK+A +    M   GC P+ + Y+ LI G C+V ++    E+  
Sbjct: 279 VVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFT 338

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFG 378
           ++      SP+V TY+S+I    K  ++D A  +  +M  NSC   P+ V +  ++DG  
Sbjct: 339 KM-LGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCA--PNVVIYTEMVDGLC 395

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           KVG    A  +   M   G  P+VVT++++IDG+ + G++++ L+L   M  K  +PN  
Sbjct: 396 KVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFI 455

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ +LIN  C    L+DA + L+++K         MY  VI+GF  +     +  ++AE+
Sbjct: 456 TYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAEL 513

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            E    P    + +LI      GR+  A+ +  ++     A  +  V SLI  L      
Sbjct: 514 SEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYV-SLIESLTLACKV 572

Query: 559 NEAFRI 564
           ++AF++
Sbjct: 573 DKAFKL 578



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS---- 385
           P  + + S++  YC+ G    A  +  +M  CG +P  V +N+LI G     ++ S    
Sbjct: 9   PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVI 68

Query: 386 --AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             AE     ML  G + + V   +     C  G+  +   +  EM  K   P+  T++ +
Sbjct: 69  GLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKV 128

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I  LC  +++  A +  +++K N + P  + Y  ++D FCK G +++A     EM++  C
Sbjct: 129 IGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGC 188

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P+ VT+T LI  +    ++  A  IF  ML  GC P+ +T  +LI    K G   +A +
Sbjct: 189 APNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQ 248

Query: 564 IMQRASEDQ 572
           I  R   D+
Sbjct: 249 IYARMKNDK 257



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 162/362 (44%), Gaps = 4/362 (1%)

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
           V + F  + S+   PN       V    +A K   A+ LL          +  +Y++L++
Sbjct: 263 VDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALID 322

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
              K    DEA  +F +       P+ +T++ LI  L +   +  A +    M    C+P
Sbjct: 323 GFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAP 382

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           ++V Y  ++ GLC+V +    + L+  ++ K  + P+VVTYT++I G+ K G++D+   +
Sbjct: 383 NVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCY-PNVVTYTAMIDGFGKAGRVDRCLEL 441

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
              M S G  P+ +T+ VLI+     G +  A  + E M    +   +  +  +I+G+  
Sbjct: 442 LQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF-- 499

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           + +    L L  E+      P +  + +LI+   K  RL  A    ++L       +   
Sbjct: 500 SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-T 558

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y  +I+    A  VD+A  + ++M  +   P+      LI G    G+  EA+ + + + 
Sbjct: 559 YVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSIC 618

Query: 535 RI 536
           ++
Sbjct: 619 QM 620



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 96/257 (37%), Gaps = 10/257 (3%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           KRLD   L LK L     N S   +   Y  ++  LC++G  D    +   M   G  PN
Sbjct: 363 KRLD---LALKVLTKMLEN-SCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPN 418

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                  +    +AG+ D    LL          +   Y  L+N        D+A  + +
Sbjct: 419 VVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLE 478

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E  + Y       +  +I+G S   E   +     ++   G  P +  Y  LI    +  
Sbjct: 479 EMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAG 536

Query: 311 EVARGHELLKEVKFKSEFSPDVV-TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            +    EL +E+   S FS     TY S+I       K+DKA  +Y++M   G  P    
Sbjct: 537 RLEMALELHEEL---SSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSM 593

Query: 370 FNVLIDGFGKVGNMVSA 386
              LI G  +VG    A
Sbjct: 594 LVCLIKGLLRVGKWEEA 610


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 203/408 (49%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++RSLC  GL      V D M   G     PM    + +  R G   +A   L   
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T+ +   N +++A+ +Q   DE V + ++      +PD  ++N +++GL      
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRW 229

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               E   +M   GC P++ T+NTLI+ LCR     + HE L ++  +   +PD+  Y +
Sbjct: 230 DDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP-EHGCTPDLRMYAT 288

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G  + A  I + M S G+KP+ V +N ++ G         AE +   M    
Sbjct: 289 IIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED 348

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D VTF+ L+D +C+NG +++ ++L ++M      P+V T+T +IN  CKE  +++A 
Sbjct: 349 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 408

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK +      P    Y  V+ G C+A    +A  +++ M ++ C P+ VTF  LI   
Sbjct: 409 MLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM 468

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C KG + +AI +  +ML  GC+PD I+ +++I  L K G   EA  ++
Sbjct: 469 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 516



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 193/410 (47%), Gaps = 5/410 (1%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           L  L + KR D+    ++ L    V +    +  T+N ++  LC  GL + V      M 
Sbjct: 220 LKGLCMAKRWDD----VEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP 275

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
             G  P+  M    +    + G  + A  +LS+     +  +   YN++L  L      +
Sbjct: 276 EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 335

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           EA  +  E F+     D  TFNIL+    + G V +  E    M   GC PD++TY T+I
Sbjct: 336 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVI 395

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           +G C+   V     LLK +       P+ ++YT V+ G C+  +   A  + + M   G 
Sbjct: 396 NGFCKEGLVDEAVMLLKNMS-ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGC 454

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ VTFN LI+   K G +  A  + ++ML  G  PD++++S++IDG  + G+  + L+
Sbjct: 455 LPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 514

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L + M  K ++PN   ++ + +AL +E R +   +    ++   +     +YN VI   C
Sbjct: 515 LLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLC 574

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           K    D A    A M    C P++ T+TILI G   +G + EA  + +++
Sbjct: 575 KRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 193/404 (47%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V++ LC     D V+ +   M   G  PN       ++   R G  +     LSQ 
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQM 274

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T    MY ++++ + K  + + A  +         +P+   +N +++GL      
Sbjct: 275 PEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERW 334

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +   +M    C  D VT+N L+   C+   V R  ELL+++  +    PDV+TYT+
Sbjct: 335 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LEHGCIPDVITYTT 393

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M++CG KP+ +++ +++ G  +    V A+ +   M+  G
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+ VTF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K  +  +A 
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +     + G  D+   +   +++   + D   +  +I   
Sbjct: 514 ELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSL 573

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C +     AI  F  M+  GC P++ T   LI  L   G+  EA
Sbjct: 574 CKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREA 617



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 160/347 (46%), Gaps = 1/347 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            + Y  ++  +C+ G H+    +   M S G  PN       +     A + + A+ LL+
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 342

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +    +  +    +N L++   +    D  + + ++       PD  T+  +I G  + G
Sbjct: 343 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 402

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V +A     +M + GC P+ ++Y  ++ GLCR        EL+  +  +    P+ VT+
Sbjct: 403 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM-IQQGCLPNPVTF 461

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I+  CK G +++A  +  +M   G  P  ++++ +IDG GK G    A  +   M++
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN 521

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ + +SS+     R G+ ++ +++ D ++   +  +   +  +I++LCK    + 
Sbjct: 522 KGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDR 581

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           A  F   +  N  +P    Y  +I G    G V EA  +++E+  +R
Sbjct: 582 AIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 628



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 1/311 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+ +T+  +++ L   G +  A     +M   GC+      + ++   CR          
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+ +  K   + D      V+S  C+ G +D+   +  ++ S G +P  V++N ++ G  
Sbjct: 166 LQVLHAKG-CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
                   E +   M+  G  P+V TF++LI   CRNG   Q  +   +M     +P++ 
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +I+ +CK+     A   L ++    L P    YN V+ G C A   +EA  ++AEM
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            ++ C  D VTF IL+   C  G +   I +  +ML  GC PD IT  ++I+   K G+ 
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 404

Query: 559 NEAFRIMQRAS 569
           +EA  +++  S
Sbjct: 405 DEAVMLLKNMS 415



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 139/342 (40%), Gaps = 42/342 (12%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            + LI+ L   G    A       G    +  +V YN +I+G CR  +VA    L   V 
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGD---AAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKP---------------- 365
                 P+  TY  ++   C  G +  A  + +EM    C   P                
Sbjct: 104 VP----PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF 159

Query: 366 -SAV----------------TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            SAV                  N+++    + G +     +  ++ SFG  PD+V+++++
Sbjct: 160 RSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAV 219

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           + G C   + +   +L  EM      PNV TF  LI  LC+          L Q+  +  
Sbjct: 220 LKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGC 279

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P   MY  +IDG CK G+ + AN I++ M     KP+ V +  ++ G C   R  EA  
Sbjct: 280 TPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAED 339

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  +M +  C  DD+T N L+    + G+ +    ++++  E
Sbjct: 340 LLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 381



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 84/182 (46%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  +C+ GL +    +   M  +G  P+       +    +AGK + A  LL+  
Sbjct: 460 TFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 519

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +T +Y+S+ +AL ++   D+ + MF        + D   +N +I  L +  E 
Sbjct: 520 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWET 579

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +FF  M S GC P+  TY  LI GL     V    +LL E+  +      +V +  
Sbjct: 580 DRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRHFG 639

Query: 338 VI 339
           ++
Sbjct: 640 IV 641


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 235/468 (50%), Gaps = 12/468 (2%)

Query: 91  NEFWFVKVVCTLLL--RSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRV 148
           NE  FVKVV   +    S + +DT   ++  K     +++   +L N K+G++FL+  R 
Sbjct: 153 NEKQFVKVVDLFMEIENSGFRTDT---FMYAK-----AIQAAVKLQNLKMGMEFLDSMRK 204

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
                + F  YN+++  LC        + +FD M +   + +       +    + G+ D
Sbjct: 205 RGVRPNVF-IYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELD 263

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           AA  +  + +   V  +   +NSLL+ L K     EA  + KE       PD +T++IL 
Sbjct: 264 AAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILF 323

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL R  +   A E +      G   +  T + L++GLC+  +V +  E+LK+   ++  
Sbjct: 324 DGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT-ENGL 382

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             D V Y + ++GYC++G M+KA      M S G++P+++TFN LID F  +  M  AE 
Sbjct: 383 VADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEE 442

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
             ++M   G  P V T+++LIDGY +    ++  ++ ++M+   + PNV ++  LIN LC
Sbjct: 443 WVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLC 502

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ ++ +A   L+ +    ++P   +YN +IDG C  G V +A     EM      P  V
Sbjct: 503 KDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLV 562

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           T+ +LI G C KG++ EA     ++   G +PD IT NSLIS     G
Sbjct: 563 TYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAG 610



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 204/409 (49%), Gaps = 2/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+M      + +   M  +G +P+           +R    + A  L  Q 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + ++ +  + LLN L KQ   ++A  + K++       D   +N  + G  RIG++
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      M SFG  P+ +T+N+LI   C + E+ +  E +K++  K   +P V TY +
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKG-VTPSVETYNT 461

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY KL   D+   I  +M   G+KP+ V++  LI+   K G ++ AE +   M+  G
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+   ++ LIDG C  G++   L+  DEM    +SP + T+ +LI+ LCK+ +L +A 
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            FL Q+  +   P    YN +I G+  AGNV +   +   M+    KP   T+  LI G 
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG- 640

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C K  +     ++N+ML++   PD +  N++I C  + G   +A+ + Q
Sbjct: 641 CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQ 689



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 196/419 (46%), Gaps = 36/419 (8%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +F  + + G   ++ M    + + ++          L   R   V  + F+YN L+  L 
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           ++    +A  MF E   +       T+N LI G  ++GE+  AF+    M     +P+I+
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+N+L+SGLC++ ++     LLKE++    F PD  TY+ +  G  +    + A  +Y +
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNG-FMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
               GI+ +  T ++L++G  K G +  AE + ++    G + D V +++ ++GYCR G 
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGD 401

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +N+ +   + M+   L PN  TF  LI+  C    ++ A  ++K++    + P    YN 
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNT 461

Query: 478 VIDGF-----------------------------------CKAGNVDEANVIVAEMEEKR 502
           +IDG+                                   CK G + EA +++ +M  + 
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             P+   + +LI G CM G++ +A+  F++M+R   +P  +T N LI  L K G   EA
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 194/399 (48%), Gaps = 4/399 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++  LC+ G  +  + +      +G + +  +   FV+   R G  + A   + + 
Sbjct: 353 TGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERM 412

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  ++  +NSL++        D+A    K+       P   T+N LI G  ++   
Sbjct: 413 ESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTF 472

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            + F+    M   G  P++V+Y +LI+ LC+  ++     +L+++  +    P+   Y  
Sbjct: 473 DRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVL-PNAQVYNM 531

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C +GK+  A   ++EM    I P+ VT+NVLIDG  K G +  AE    ++ S G
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + PDV+T++SLI GY   G +++ L L + MK   + P V T+  LI+   KE  +    
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVE 650

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++   +L+P   +YN +I  + + GN  +A  +   M ++   PDK+T+  LI+GH
Sbjct: 651 KLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGH 710

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS--CLLK 554
             +G++     + N M     AP   T + L+   C LK
Sbjct: 711 FREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLK 749



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 1/313 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           + DT+ +   IQ   ++  +K   EF   M   G  P++  YN LI GLCR   +    +
Sbjct: 173 RTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEK 232

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +  E+         +VTY ++I GYCK+G++D A  +   M    + P+ +TFN L+ G 
Sbjct: 233 MFDEM-CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGL 291

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K+  M  A  + + M   G++PD  T+S L DG  R    N  ++L ++   K +  N 
Sbjct: 292 CKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINN 351

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           YT +IL+N LCK+ ++  A   LK+   N LV    +YN  ++G+C+ G++++A + +  
Sbjct: 352 YTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIER 411

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           ME    +P+ +TF  LI   C    M +A     KM   G  P   T N+LI    K   
Sbjct: 412 MESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT 471

Query: 558 PNEAFRIMQRASE 570
            +  F+I+++  E
Sbjct: 472 FDRCFQILEQMEE 484



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 172/376 (45%), Gaps = 2/376 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C+M   D  +     M   G  P+       +    +    D    +L Q 
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y SL+N L K     EA  + ++       P+   +N+LI G   +G+V
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A  FF +M     SP +VTYN LI GLC+  ++    + L ++   S  SPDV+TY S
Sbjct: 543 KDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQIT-SSGHSPDVITYNS 601

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGY   G + K  G+Y  M + GIKP+  T++ LI G  K G +   E +   ML   
Sbjct: 602 LISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMN 660

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD V ++++I  Y   G   +   L   M  + + P+  T+  LI    +E +L++ +
Sbjct: 661 LLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIK 720

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  +K  +L PK   Y+ ++ G C   +   A V   EM E    P+      L  G 
Sbjct: 721 DLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGL 780

Query: 518 CMKGRMVEAISIFNKM 533
             +GR+ E   I ++M
Sbjct: 781 EQEGRLQEVQVICSEM 796



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 124/309 (40%), Gaps = 33/309 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G     ++V   M   G LPN+ +    +      GK   A     + 
Sbjct: 493 SYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEM 552

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E++ +   YN L++ L K+    EA     +       PD  T+N LI G +  G V
Sbjct: 553 MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNV 612

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---------VNEVARGHELLKEVKFKS-- 326
            K    +  M + G  P + TY+ LISG  +          NE+ + + L   V + +  
Sbjct: 613 SKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMI 672

Query: 327 ----------------------EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                                    PD +TY S+I G+ + GK+     + N M +  + 
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P A T+++L+ G   + +   A      M+   +LP+    + L  G  + G+L +   +
Sbjct: 733 PKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVI 792

Query: 425 CDEMKGKNL 433
           C EM  K +
Sbjct: 793 CSEMNVKGI 801



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 4/224 (1%)

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           K   ++ E+ + G +     +   I    K+ N+       + M   G  P+V  ++ LI
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            G CR  ++    K+ DEM   NL  ++ T+  LI+  CK   L+ A +  +++K   + 
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG--HCMKGRMVEAI 527
           P    +N ++ G CK   + EA  ++ EME     PD  T++IL  G   C  G    A+
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGN--GAM 336

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            ++ +    G   ++ T + L++ L K G   +A  I+++ +E+
Sbjct: 337 ELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTEN 380



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 3/151 (1%)

Query: 420 QGLKLCD---EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           Q +K+ D   E++      + + +   I A  K   L     FL  ++   + P  F+YN
Sbjct: 156 QFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYN 215

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I G C+   + +A  +  EM         VT+  LI G+C  G +  A  +  +M   
Sbjct: 216 VLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEK 275

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             AP+ IT NSL+S L K     EA  +++ 
Sbjct: 276 SVAPNIITFNSLLSGLCKMRKMKEARSLLKE 306


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 202/401 (50%), Gaps = 2/401 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G  +    +   M + G  PNS      +    R      A  LL + 
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   Y +++N L    +   A  + ++      +P+   ++ LI G +  G +
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   G +PDI  YN +IS L +  ++      L E++ +    PD VT+ +
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG-LKPDAVTFGA 459

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I GY K GKM +A   ++EM   G+ P+   + VLI+G  K GN++ A  +   + + G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV T S+ I G  +NG++ + LK+  E+K K L P+V+T++ LI+  CK+  +  A 
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    + P  F+YN ++DG CK+G++  A  +   M EK  +PD VT++ +I G+
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI-SCLLKGGM 557
           C    + EA S+F++M   G  P     N+L+  C  +G M
Sbjct: 640 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 680



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 203/392 (51%), Gaps = 2/392 (0%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           FD M   G +PN+P+    ++   +AG    A  +        V       ++ ++ L+K
Sbjct: 477 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 536

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                EA+ +F E       PD +T++ LI G  + GEV+KAFE   +M   G +P+I  
Sbjct: 537 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 596

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YN L+ GLC+  ++ R  +L   +  K    PD VTY+++I GYCK   + +A  +++EM
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
            S G++P +  +N L+ G  K G+M  A  +   ML  G+    ++F++LIDGYC++ ++
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 714

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            +  +L  EM  K + P+  T+T +I+  CK  ++ +A    K+++  +L+     Y  +
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           + G+ K G   E   +  +M  K  KPD+VT+ ++I  HC +  +VEA  + ++++  G 
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                  + LI+ L K     EA +++    E
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGE 866



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 201/412 (48%), Gaps = 18/412 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +++++ S   MG+ D    VF   ++D     S +I     + +R+      KGL+    
Sbjct: 159 FDILIDSYKRMGMLDEAANVFFVAKND-----SILISLIRCNSLRSM---GEKGLVP--- 207

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +T+ Y  +   L +    +EA   F+E  +   +PD    + LI G  R G++ 
Sbjct: 208 ------NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +       M S G   +++TYN LI GLC+  ++ +  E+LK +       P+  T+  +
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM-ITLGCKPNSRTFCLL 320

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYC+   M +A  + +EM    + PSAV++  +I+G     ++  A  + E+M   G 
Sbjct: 321 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 380

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+VV +S+LI GY   G++ +  +L D M    ++P+++ +  +I+ L K  ++ +A  
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           +L +++   L P    +   I G+ K G + EA     EM +    P+   +T+LI GH 
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             G ++EA+SIF  +  +G  PD  T ++ I  LLK G   EA ++     E
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 552



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 235/503 (46%), Gaps = 49/503 (9%)

Query: 90  SNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSP--LNSLEVIKRLDNPKLGLKFLEFSR 147
           S    F + +   L ++++ +   + ++  KL+P  + ++    ++ +PK  L F  +S+
Sbjct: 36  SETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQ 95

Query: 148 VNLSLNHSFKTYNLVMRSLCE---MGLHDSV----------------QVVFDYMRSDGHL 188
             + +     +++++   LC     GL + V                 V+F +    G  
Sbjct: 96  SQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGG-- 153

Query: 189 PNSPMI-EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
            +SP++ +  + S  R G  D A  +    +   + +S    NSL      ++  ++ + 
Sbjct: 154 -SSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL------RSMGEKGLV 206

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
                      P+T+T+ I+  GL R   + +A   F +M   G  PD    + LI G  
Sbjct: 207 -----------PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFM 255

Query: 308 R---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           R   ++EV R    +K+V        +++TY  +I G CK GKM+KA  I   M + G K
Sbjct: 256 REGDIDEVLR----IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCK 311

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P++ TF +LI+G+ +  NM  A  + + M     +P  V++ ++I+G C    L+   KL
Sbjct: 312 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 371

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            ++M    L PNV  ++ LI     E R+ +ARR L  +  + + P  F YN +I    K
Sbjct: 372 LEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 431

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           AG ++EA+  + E++ +  KPD VTF   I+G+   G+M EA   F++ML  G  P++  
Sbjct: 432 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 491

Query: 545 VNSLISCLLKGGMPNEAFRIMQR 567
              LI+   K G   EA  I + 
Sbjct: 492 YTVLINGHFKAGNLMEALSIFRH 514



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 194/408 (47%), Gaps = 37/408 (9%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +F ++ + G LP+      F+   ++ G+   A  + S+ +   +    F Y+SL++   
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 570

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           KQ   ++A  +  E       P+ + +N L+ GL + G++++A + F  M   G  PD V
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+T+I G C+   VA    L  E+  K    P    Y +++ G CK G M+KA  ++ E
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKG-VQPHSFVYNALVHGCCKEGDMEKAMNLFRE 689

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G   + ++FN LIDG+ K   +  A  + + M++   +PD VT++++ID +C+ G+
Sbjct: 690 MLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 748

Query: 418 LNQGLKLCDEMKGKNL-----------------------------------SPNVYTFTI 442
           + +   L  EM+ +NL                                    P+  T+ +
Sbjct: 749 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 808

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I A CKE+ L +A +   ++    ++ K  +++ +I   CK  ++ EA+ ++ EM E  
Sbjct: 809 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 868

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            KP     + L+      G+M EA  +F  +  +G  PD  T+  L++
Sbjct: 869 LKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 916



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 175/360 (48%), Gaps = 2/360 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++   C+ G  +    + D M   G  PN  +    V    ++G    A+ L    
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +   +  Y+++++   K  N  EA  +F E      QP ++ +N L+ G  + G++
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 680

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA   F +M   G +  + ++NTLI G C+  ++    +L +E+  K +  PD VTYT+
Sbjct: 681 EKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAK-QIMPDHVTYTT 738

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI  +CK GKM++A  ++ EM    +    VT+  L+ G+ K+G       + E+M++ G
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+  +I  +C+   L +  KL DE+ GK +        +LI ALCK   L +A 
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 858

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L ++    L P     + ++  F +AG +DEA  +   ++     PD  T   L+ G+
Sbjct: 859 KLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGN 918



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 168/340 (49%), Gaps = 2/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+ G     + +FD M   G  P+S      +    ++     A  L  +  
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V   +F+YN+L++   K+ + ++A+ +F+E  +      T +FN LI G  +  +++
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-KGFATTLSFNTLIDGYCKSCKIQ 715

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A + F +M +    PD VTY T+I   C+  ++   + L KE++ +     D VTYTS+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ-ERNLIVDTVTYTSL 774

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GY KLG+  +   ++ +M + G+KP  VT+ ++I    K  N+V A  +R+ ++  G 
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           L        LI   C+   L +  KL DEM    L P++   + L+ +  +  ++++A R
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
             + +K   LVP       +++G     + ++A  ++ ++
Sbjct: 895 VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 175/337 (51%), Gaps = 2/337 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N LL+A V++  A EA  +FK +      PD+ T++ LI G  +  + ++A+    +M  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  P    YNT+I GLC    V     L+     +   +P V+TYT ++   CK  ++ 
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSA--LVHYRDMQRHCAPSVITYTILVDALCKSARIS 119

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A+ I  +M   G  P+ VT+N LI+GF K+GNM  A  +  +ML     PDV T++ LI
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DGYC+  +   G KL  EM      PN  T+  L+++L K  +  DA    + +   D  
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P  F +N +ID FCK G +D A  +   M ++ C PD  T+ I+I G C   R+ +A  +
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             +M   GC PD +T NS++S L K    +EA+ + +
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 336



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 189/380 (49%), Gaps = 2/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN +++ LC+ G  DS  V +  M+     P+       V +  ++ +   A  +L   
Sbjct: 70  VYNTIIKGLCDNGRVDSALVHYRDMQRHCA-PSVITYTILVDALCKSARISDASLILEDM 128

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+L+N   K  N DEAV +F +       PD +T+NILI G  +    
Sbjct: 129 IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERP 188

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   +   +M  +GC P+ +TYNTL+  L +  +      L  ++  + +  P   T+  
Sbjct: 189 QDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNL-AQMMLRRDCKPSHFTFNL 247

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK+G++D A  ++  M   G  P   T+N++I G  +   +  A  + ERM   G
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT++S++ G C+  Q+++  ++ + ++      +V T + LI+ LCK  RL+DA 
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 367

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L++++ N   P    Y  +I GFCKA  +D++    +EM +K C P  +T++I+I   
Sbjct: 368 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 427

Query: 518 CMKGRMVEAISIFNKMLRIG 537
           C   R+ +   +   ML  G
Sbjct: 428 CKSARVRDGCMLLKTMLERG 447



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 194/417 (46%), Gaps = 37/417 (8%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+S      ++   +A     A  LL +     +     +YN+++  L      D A+  
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           +++  R +  P   T+ IL+  L +   +  A     DM   GC+P++VTYNTLI+G C+
Sbjct: 91  YRDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
           +  +     L  ++  ++  SPDV TY  +I GYCK  +      +  EM   G +P+ +
Sbjct: 150 LGNMDEAVVLFNQM-LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+N L+D   K G  + A  + + ML     P   TF+ +ID +C+ GQL+   +L   M
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             +   P++YT+ I+I+  C+ NR++DAR+ L+++      P    YN ++ G CKA  V
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328

Query: 489 DE-----------------------------------ANVIVAEMEEKRCKPDKVTFTIL 513
           DE                                   A  ++ EME     PD V +TIL
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 388

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           I G C   ++ ++++ F++ML  GC P  IT + +I  L K     +   +++   E
Sbjct: 389 IHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 445



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 178/374 (47%), Gaps = 2/374 (0%)

Query: 129 VIKRL-DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           +IK L DN ++    + +  +      S  TY +++ +LC+        ++ + M   G 
Sbjct: 74  IIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGC 133

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
            PN       ++   + G  D A  L +Q      +   F YN L++   KQ    +   
Sbjct: 134 APNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAK 193

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           + +E  +   +P+  T+N L+  L + G+   AF     M    C P   T+N +I   C
Sbjct: 194 LLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFC 253

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +V ++   +EL + +  +    PD+ TY  +ISG C+  ++D A  +   M   G  P  
Sbjct: 254 KVGQLDLAYELFQLMTDRGCL-PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 312

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           VT+N ++ G  K   +  A  + E + + GY  DVVT S+LIDG C++ +L+   KL  E
Sbjct: 313 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 372

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+    +P+V  +TILI+  CK ++L+ +  F  ++     VP    Y+ VID  CK+  
Sbjct: 373 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 432

Query: 488 VDEANVIVAEMEEK 501
           V +  +++  M E+
Sbjct: 433 VRDGCMLLKTMLER 446



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 1/138 (0%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           SP+  T++ LIN  CK      A R L +++   +VP   +YN +I G C  G VD A V
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
              +M+ + C P  +T+TIL+   C   R+ +A  I   M+  GCAP+ +T N+LI+   
Sbjct: 90  HYRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148

Query: 554 KGGMPNEAFRIMQRASED 571
           K G  +EA  +  +  E+
Sbjct: 149 KLGNMDEAVVLFNQMLEN 166


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 204/410 (49%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G  +    +   M + G  PNS      +    R      A  LL + 
Sbjct: 82  TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   Y +++N L    +   A  + ++      +P+   ++ LI G +  G +
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   G +PDI  YN +IS L +  ++      L E++ +    PD VT+ +
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG-LKPDAVTFGA 260

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I GY K GKM +A   ++EM   G+ P+   + VLI+G  K GN++ A  +   + + G
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV T S+ I G  +NG++ + LK+  E+K K L P+V+T++ LI+  CK+  +  A 
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    + P  F+YN ++DG CK+G++  A  +   M EK  +PD VT++ +I G+
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 440

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C    + EA S+F++M   G  P     N+L+    K G   +A  + + 
Sbjct: 441 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 490



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 209/429 (48%), Gaps = 19/429 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  L + G  +        ++  G  P++     F+    + GK   A     +  
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +  +Y  L+N   K  N  EA+ +F+    L   PD  T +  I GL + G V+
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A + F ++   G  PD+ TY++LISG C+  EV +  EL  E+  K   +P++  Y ++
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG-IAPNIFIYNAL 401

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G CK G + +A  +++ M   G++P +VT++ +IDG+ K  N+  A  +   M S G 
Sbjct: 402 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 461

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P    +++L+ G C+ G + + + L  EM  K  +  + +F  LI+  CK  ++ +A +
Sbjct: 462 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQ 520

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-----------------K 501
             +++    ++P    Y  VID  CKAG ++EAN++  EM+E                 K
Sbjct: 521 LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAK 580

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             KPD+VT+ ++I  HC +  +VEA  + ++++  G        + LI+ L K     EA
Sbjct: 581 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 640

Query: 562 FRIMQRASE 570
            +++    E
Sbjct: 641 SKLLDEMGE 649



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 194/390 (49%), Gaps = 19/390 (4%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +F ++ + G LP+      F+   ++ G+   A  + S+ +   +    F Y+SL++   
Sbjct: 312 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 371

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           KQ   ++A  +  E       P+ + +N L+ GL + G++++A + F  M   G  PD V
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+T+I G C+   VA    L  E+  K    P    Y +++ G CK G M+KA  ++ E
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSKG-VQPHSFVYNALVHGCCKEGDMEKAMNLFRE 490

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G   + ++FN LIDG+ K   +  A  + + M++   +PD VT++++ID +C+ G+
Sbjct: 491 MLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 549

Query: 418 LNQGLKLCDEMKGKNL-----------------SPNVYTFTILINALCKENRLNDARRFL 460
           + +   L  EM+ +NL                  P+  T+ ++I A CKE+ L +A +  
Sbjct: 550 MEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 609

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++    ++ K  +++ +I   CK  ++ EA+ ++ EM E   KP     + L+      
Sbjct: 610 DEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEA 669

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           G+M EA  +F  +  +G  PD  T+  L++
Sbjct: 670 GKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 162/312 (51%), Gaps = 7/312 (2%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARG 315
           P+T+T+ I+  GL R   + +A   F +M   G  PD    + LI G  R   ++EV R 
Sbjct: 8   PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR- 66

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
              +K+V        +++TY  +I G CK GKM+KA  I   M + G KP++ TF +LI+
Sbjct: 67  ---IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G+ +  NM  A  + + M     +P  V++ ++I+G C    L+   KL ++M    L P
Sbjct: 124 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 183

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV  ++ LI     E R+ +ARR L  +  + + P  F YN +I    KAG ++EA+  +
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            E++ +  KPD VTF   I+G+   G+M EA   F++ML  G  P++     LI+   K 
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 303

Query: 556 GMPNEAFRIMQR 567
           G   EA  I + 
Sbjct: 304 GNLMEALSIFRH 315



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 1/346 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T+ Y  +   L +    +EA   F+E  +   +PD    + LI G  R G++ +     
Sbjct: 9   NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M S G   +++TYN LI GLC+  ++ +  E+LK +       P+  T+  +I GYC+
Sbjct: 69  DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM-ITLGCKPNSRTFCLLIEGYCR 127

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
              M +A  + +EM    + PSAV++  +I+G     ++  A  + E+M   G  P+VV 
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +S+LI GY   G++ +  +L D M    ++P+++ +  +I+ L K  ++ +A  +L +++
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              L P    +   I G+ K G + EA     EM +    P+   +T+LI GH   G ++
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 307

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           EA+SIF  +  +G  PD  T ++ I  LLK G   EA ++     E
Sbjct: 308 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 353



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 167/358 (46%), Gaps = 19/358 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++   C+ G  +    + D M   G  PN  +    V    ++G    A+ L    
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +   +  Y+++++   K  N  EA  +F E      QP ++ +N L+ G  + G++
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDM 481

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA   F +M   G +  + ++NTLI G C+  ++    +L +E+  K +  PD VTYT+
Sbjct: 482 EKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAK-QIMPDHVTYTT 539

Query: 338 VISGYCKLGKMDKATGIYNEMN-----------------SCGIKPSAVTFNVLIDGFGKV 380
           VI  +CK GKM++A  ++ EM                  + G+KP  VT+ ++I    K 
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
            N+V A  +R+ ++  G L        LI   C+   L +  KL DEM    L P++   
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           + L+ +  +  ++++A R  + +K   LVP       +++G     + ++A  ++ ++
Sbjct: 660 STLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 35/239 (14%)

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G+ P+  T+ ++  G  +   M  A+   E M   G  PD    S+LIDG+ R G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 418 LNQGLKLCDEM--------------------------------KGK---NLSPNVYTFTI 442
           +++ L++ D M                                KG       PN  TF +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI   C+E+ +  A   L +++  +LVP    Y  +I+G C   ++  AN ++ +M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            KP+ V ++ LI+G+  +GR+ EA  + + M   G APD    N++ISCL K G   EA
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 225/453 (49%), Gaps = 15/453 (3%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           + S    +R D+     + ++  R    L+    T+ +++  LC+ G+ +    VF  M 
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLH----TFLILVDCLCKAGMDEKAFEVFHEMM 216

Query: 184 SDGHLP-NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
           + G +P +  +    V + ++A +   A+ +  Q            YN++++ L K  +A
Sbjct: 217 AMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHA 276

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            EA+ +          P   T+ IL+  L + G +++A E F  M + G  P+ V Y +L
Sbjct: 277 QEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSL 336

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G  +   +     L  E+  ++ + PDV+T+T +I G CK G  ++A   + EM   G
Sbjct: 337 IHGFAKSGRMKEACSLFDEM-VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            KP+ VT+  +I G  K+G + +A  + + M++ G  PD VT+  L+DG+C+ G+L++  
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCK----ENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           +L DE+   + SPN+  ++ L+N LC     E  L+D     +Q K       P +   +
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDD---LFEQSKAAAETLDPGLCCSI 512

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM--KGRMVEAISIFNKMLRI 536
           I G CK G +DEA  I   M  + CKPD  T+ ILI G C   + R+  A ++ + + ++
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV 572

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           G  PD +T   L   L K G  + A ++++ AS
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 203/463 (43%), Gaps = 38/463 (8%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           V++ L      + F  ++       H   TYN +M  L     +     + + M   G  
Sbjct: 92  VLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIA 151

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN+      + S  R  + D A       +          +  L++ L K    ++A  +
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV 211

Query: 249 FKEYFRL-YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           F E   + +  PD      +++ L +   VK+A E F  M   G  PD + YNT+I GL 
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLA 271

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +        ++L  +  K+   P  VTY  +++  CK G +++A  ++  M + G +P++
Sbjct: 272 KAGHAQEALKVLDNMLAKA-CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS 330

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V +  LI GF K G M  A  + + M+  GY PDV+T + +IDG C++G   Q  K  +E
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE 390

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M      PNV T+T +I  L K  R+ +A R +K +  +   P    Y  ++DGFCK G 
Sbjct: 391 MMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGR 450

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTIL---------------------------------- 513
           +DEA  ++ E+++    P+   ++ L                                  
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCC 510

Query: 514 --IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             I+G C  GR+ EA  IF +M+  GC PD  T N LI+ L +
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCR 553



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 3/356 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            F YN L+N LV + N  +   + +E  +    P+T++FNILI+  +R      A   F 
Sbjct: 119 VFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFE 178

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M    C PD+ T+  L+  LC+     +  E+  E+       PD   +T+++    K 
Sbjct: 179 IMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKA 238

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            ++ +A  ++ +M  CG  P A+ +N +IDG  K G+   A  + + ML+   +P  VT+
Sbjct: 239 KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
             L++  C+ G L +  +L   M      PN   +T LI+   K  R+ +A     ++  
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    +  +IDG CK+GN ++A     EM    CKP+ VT+T +I G    GR+  
Sbjct: 359 AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVAN 418

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---MQRASEDQNLQLPS 578
           A  I   M+  GC PD +T   L+    K G  +EA ++   + + S   NLQL S
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 197/428 (46%), Gaps = 59/428 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TY +++ SLC+ G  +  + +F  M + G  PNS +    +    ++G+   A  L  + 
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               +RP  +T     +  +++ L K  N ++A   F+E  R   +P+  T+  +IQGLS
Sbjct: 357 VEAGYRPDVIT-----HTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +IG V  AF     M + GC PD VTY  L+ G C++  +    +LL E+  K   SP++
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD-KCSSSPNL 470

Query: 333 VTYTS------------------------------------VISGYCKLGKMDKATGIYN 356
             Y+S                                    +I G CK G++D+A  I+ 
Sbjct: 471 QLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQ 530

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF-------GYLPDVVTFSSLI 409
            M S G KP A T+N+LI+G  +     S E   ER  +        GYLPD VT++ L 
Sbjct: 531 RMVSEGCKPDATTYNILINGLCR-----SRENRVERAFALLHDLEKVGYLPDAVTYTPLC 585

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            G C+ G++++ +K+ +E   +  + +V  +T L   LC + +++ A    +++      
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  +I+G  K   +++A     EM  K  KP   T+T L+   C  G + EA   
Sbjct: 646 PDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705

Query: 530 FNKMLRIG 537
           F  ML  G
Sbjct: 706 FESMLARG 713



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 169/333 (50%), Gaps = 2/333 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +TF +N L+ +  +   AD+AV  F+   R   +PD  TF IL+  L + G  +KAFE F
Sbjct: 153 NTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVF 212

Query: 285 YDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
           ++M + G   PD   +  ++  L +   V    E+  +++ K  F PD + Y ++I G  
Sbjct: 213 HEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQME-KCGFPPDAIAYNTMIDGLA 271

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G   +A  + + M +    P+ VT+ +L++   K G +  AE +   M + G+ P+ V
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            ++SLI G+ ++G++ +   L DEM      P+V T T++I+ LCK      A +  +++
Sbjct: 332 IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                 P    Y  +I G  K G V  A  I+  M    C PD VT+  L+ G C  GR+
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            EA  + +++ +   +P+    +SL++ L  GG
Sbjct: 452 DEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG 484



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 193/413 (46%), Gaps = 5/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++ L ++G   +   +   M + G  P+S      +    + G+ D A  LL + 
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVY-MFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + +  +Y+SL+N L    + ++ +  +F++        D      +I GL + G 
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGR 521

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV--NEVARGHELLKEVKFKSEFSPDVVT 334
           + +A   F  M S GC PD  TYN LI+GLCR   N V R   LL +++ K  + PD VT
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE-KVGYLPDAVT 580

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT +  G CK+G++D+A  +  E +S G     V +  L  G    G +  A  + + M+
Sbjct: 581 YTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMV 640

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD   +  +I+G  +  +L    K  DEM GK   P V T+T L+ ALC    ++
Sbjct: 641 RQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVD 700

Query: 455 DA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +A  RF   L   +LV    +Y+ +I GFCKA  VD A  +  +M  +   P  VT   L
Sbjct: 701 EAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASL 760

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             G    G+  +A  +  +M   G  P   T  +++  L K     +  +++Q
Sbjct: 761 FDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQ 813



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 171/382 (44%), Gaps = 43/382 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA-KGLLSQ 216
           TY  ++   C++G  D    + D +      PN  +    V+     G  +     L  Q
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQ 496

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL--SRI 274
            +    T+   +  S++  L K    DEA  +F+       +PD  T+NILI GL  SR 
Sbjct: 497 SKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             V++AF   +D+   G  PD VTY  L  GLC++ EV R  ++L+E   +  ++ DVV 
Sbjct: 557 NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG-WNADVVA 615

Query: 335 YTSVISGYCKLGKMDKATGIYNEM--------------------------NSC------- 361
           YT++ +G C  G++D+A  ++ EM                          ++C       
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMI 675

Query: 362 --GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQL 418
             G KP+  T+  L+      GN+  A +  E ML+ G L   V+ + +LI G+C+  ++
Sbjct: 676 GKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKV 735

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           +  LKL ++M  +   P   T   L + L +  +   A+  L+++      P    +  +
Sbjct: 736 DAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795

Query: 479 IDGFCKAGNVDEANVIVAEMEE 500
           +DG  K+   DE+  ++  ++E
Sbjct: 796 LDGLRKS---DESGKLLKLVQE 814


>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 192/363 (52%), Gaps = 11/363 (3%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKA 280
           V+ S   +NSLL+ ++K+     A  +F E    Y   PDT+TFNILI+G      V + 
Sbjct: 267 VSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEG 326

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYTSVI 339
           F FF +M  F C PD+VTYNTL+ GLCR  +V   H ++K  VK     SP+VVTYT++I
Sbjct: 327 FWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLI 386

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS-FGY 398
            GYC    M +A  +  EM S G+KP+ +T+N LI G  +   +   + + E M+   G+
Sbjct: 387 RGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGF 446

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +PD  T ++LI  +C  G+L +   + ++M    + P+  T+++L+ +LC+      A  
Sbjct: 447 IPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEE 506

Query: 459 FL-----KQLKWNDLVPKPFM--YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           F      K++  +D+  KP +  YNP+ +  C  G   +A  +  ++  KR   D  ++ 
Sbjct: 507 FFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLM-KRGTQDPPSYK 565

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI+GHC +G       +   MLR    PD  T   +I  LLK G P  A + +++  + 
Sbjct: 566 TLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKS 625

Query: 572 QNL 574
            +L
Sbjct: 626 SHL 628



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 153/319 (47%), Gaps = 18/319 (5%)

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           ++ + F  M   G SP +VT+N+L+S + +    +   +L  E+      +PD  T+  +
Sbjct: 254 ESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNIL 313

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--SF 396
           I G+C    +D+    + EM+     P  VT+N L+DG  + G +  A  + + M+  S 
Sbjct: 314 IRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP 373

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+VVT+++LI GYC    + + L L  EM  + L PN  T+  LI  LC+  +L+  
Sbjct: 374 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 433

Query: 457 RRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           +  L+ +  +   +P     N +I   C  G ++EA  +  +M E R +PD  T+++L+ 
Sbjct: 434 KEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVR 493

Query: 516 GHCMKGRMVEAISIFNKMLR-------IGCAPDDITVNSLISCLLKGGMPNEAFRI---- 564
             C +G    A   F+++         +GC P     N +   L   G   +A R+    
Sbjct: 494 SLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL 553

Query: 565 MQRASEDQNLQLPSWKKAV 583
           M+R ++D     PS+K  +
Sbjct: 554 MKRGTQDP----PSYKTLI 568



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 193/493 (39%), Gaps = 86/493 (17%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLC--------- 167
           L   LS    L+ ++ +  P   L F  +        H+ ++Y L++  L          
Sbjct: 182 LAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAAR 240

Query: 168 --------EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
                   + G  +S++V F  M+  G  P+       +S  ++ G+   AK L  +   
Sbjct: 241 NFVFSIEKKSGGAESIKV-FKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 299

Query: 220 G-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              VT  T+ +N L+      +  DE  + FKE  R    PD  T+N L+ GL R G+VK
Sbjct: 300 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 359

Query: 279 -------------------------------------KAFEFFYDMGSFGCSPDIVTYNT 301
                                                +A     +M S G  P+ +TYNT
Sbjct: 360 IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 419

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI GLC   ++ +  E+L+ +     F PD  T  ++I  +C +GK+++A  ++ +M+  
Sbjct: 420 LIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL 479

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            ++P + T++VL+    + G+   AE   + +     L        L D  C+       
Sbjct: 480 RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL--------LHDVGCK------- 524

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
                        P V  +  +   LC   +   A R  +QL        P  Y  +I G
Sbjct: 525 -------------PLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILG 570

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C+ G  +    ++  M  +   PD  T+ ++I G   KG  V A     KML+    P 
Sbjct: 571 HCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPT 630

Query: 542 DITVNSLISCLLK 554
               +S+++ L++
Sbjct: 631 TAIFHSILAALVE 643



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/423 (21%), Positives = 163/423 (38%), Gaps = 67/423 (15%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NLS N    TY  ++R  C          +   M S G  PN       +     A K D
Sbjct: 374 NLSPN--VVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 431

Query: 209 AAKGLLS-QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             K +L      G     T   N+L+ A       +EA  +F++   L  QPD+ T+++L
Sbjct: 432 KIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVL 491

Query: 268 IQGLSRIGEVKKAFEFFYDMGS-------FGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
           ++ L + G+ ++A EFF ++          GC P +  YN +   LC   +  +   + +
Sbjct: 492 VRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFR 551

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           ++  +    P   +Y ++I G+C+ G  +    +   M      P A T+ ++IDG  K 
Sbjct: 552 QLMKRGTQDPP--SYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKK 609

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLI------------------------------- 409
           G+ V A    E+ML   +LP    F S++                               
Sbjct: 610 GDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKERRIRQNIDLSTHTVRLLYKSGLQD 669

Query: 410 -----------DGY-----------CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                      +GY           C++ +L +  K+      K  S ++   + +I+ L
Sbjct: 670 KAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGL 729

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE--KRCKP 505
           CK +++++A     +L    +  +      +       G ++EA  +  +M E  K+ + 
Sbjct: 730 CKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSKKMPEVPKQWQS 789

Query: 506 DKV 508
           D+ 
Sbjct: 790 DRT 792


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 215/405 (53%), Gaps = 24/405 (5%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAG---------KCDAAKGLLSQFRPGEVTMSTFMY 229
           F  M S G +PN+ +    +      G         KC   KGL+   R          Y
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA---------Y 629

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           ++++++L K     EA+ +F ++ +    PD + +N LI G  + G+++KA + + +M  
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G +P+IV YNTLI+GLC++ EV +  EL  E++ K +  PDVVTY+++I GYCK G + 
Sbjct: 690 NGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK-DLVPDVVTYSTIIDGYCKSGNLT 748

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE--YMRERMLSFGYLPDVVTFSS 407
           +A  +++EM S GI P    + +LIDG GK GN+  A   +   +  S G L     F+S
Sbjct: 749 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS---AFNS 805

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LID +C++G++ +  +L D+M  K L+PN+ T+TILI+A  K   + +A +    ++  +
Sbjct: 806 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 865

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           ++P    Y  ++  + + GN  +   +  +ME +    D + + ++   +C +G+ +EA+
Sbjct: 866 IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 925

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            + NK L  G   +D   ++LI  L K    +    ++    +++
Sbjct: 926 KLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEE 970



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 203/413 (49%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  + + G       +F+ M   G  P++      +   +++     A  LL++ 
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +  ++T S F Y+ L++ L   ++  +A  +  +  R   +P+ + +  LI+   +    
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E    M + G  PD+  YN LI GLCR  +V     LL ++  K    P+  TY +
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG-IKPNAHTYGA 561

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I+ Y K G++  A   + +M S GI P+ V + +LI G   VGN V A    + ML  G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD+  +S++I    +NG+  + + +  +     + P+V+ +  LI+  CKE  +  A 
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++  N + P   +YN +I+G CK G V +A  +  E+EEK   PD VT++ +I G+
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C  G + EA  +F++M+  G +PD      LI    K G   +A  +   A +
Sbjct: 742 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 794



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 199/443 (44%), Gaps = 37/443 (8%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N +MR L +  +      V+  M     +P+       + +  + G     K +LS+   
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK 270

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
            E   + F YN+ +  L +    DEA+ + K        PD  T+ +L+ G  +    K+
Sbjct: 271 -ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A   F  M S G +P+  TY  LI G  +   +     +  E+  +     +VVTY ++I
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG-LKLNVVTYNAMI 388

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G  K G+M KA  ++NEM   G++P   T+N+LIDG+ K  +M  A  +   M +    
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P   T+S LI G C +  L +  ++ D+M    + PNV+ +  LI A  +E+R   A   
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK--------------- 504
           LK +  N ++P  F YN +I G C+A  V+EA +++ +M EK  K               
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 505 --------------------PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
                               P+ V +TILI GHC  G  VEA+S F  ML  G  PD   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 545 VNSLISCLLKGGMPNEAFRIMQR 567
            +++I  L K G   EA  +  +
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLK 651



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 193/404 (47%), Gaps = 2/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC          V D M  +G  PN  M    + + ++  + + A  LL   
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F YN L+  L +    +EA  +  +      +P+  T+   I   S+ GE+
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A  +F DM S G  P+ V Y  LI G C V          K    +    PD+  Y++
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK-CMLEKGLIPDIRAYSA 631

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I    K GK  +A G++ +    G+ P    +N LI GF K G++  A  + + ML  G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++V +++LI+G C+ G++ +  +L DE++ K+L P+V T++ +I+  CK   L +A 
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    + P  ++Y  +IDG  K GN+++A  +  E ++K        F  LI   
Sbjct: 752 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSF 810

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C  G+++EA  +F+ M+     P+ +T   LI    K  M  EA
Sbjct: 811 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA 854



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 194/426 (45%), Gaps = 35/426 (8%)

Query: 159  YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            Y ++++  C++G        F  M   G +P+       + S  + GK   A G+  +F 
Sbjct: 594  YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 219  PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
               V    F+YNSL++   K+ + ++A  ++ E       P+   +N LI GL ++GEV 
Sbjct: 654  KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713

Query: 279  KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD------- 331
            KA E F ++      PD+VTY+T+I G C+   +    +L  E+  K   SPD       
Sbjct: 714  KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG-ISPDGYIYCIL 772

Query: 332  ---------------------------VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                                       +  + S+I  +CK GK+ +A  ++++M    + 
Sbjct: 773  IDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLT 832

Query: 365  PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
            P+ VT+ +LID +GK   M  AE +   M +   +P+ +T++SL+  Y + G   + + L
Sbjct: 833  PNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISL 892

Query: 425  CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
              +M+ + ++ +   + ++ +A CKE +  +A + L +     +  +  +++ +I   CK
Sbjct: 893  FKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCK 952

Query: 485  AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
               +     +++EM ++       T   L++G    G   EA  +   M R+G  P  ++
Sbjct: 953  EKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 1012

Query: 545  VNSLIS 550
            +   IS
Sbjct: 1013 LTDSIS 1018



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 162/362 (44%), Gaps = 41/362 (11%)

Query: 152  LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
            +N +   YN ++  LC++G     + +FD +     +P+                     
Sbjct: 692  INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPD--------------------- 730

Query: 212  GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
                             Y+++++   K  N  EA  +F E       PD + + ILI G 
Sbjct: 731  --------------VVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776

Query: 272  SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
             + G ++KA   F++         +  +N+LI   C+  +V    EL  ++  K + +P+
Sbjct: 777  GKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDK-KLTPN 834

Query: 332  VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            +VTYT +I  Y K   M++A  ++ +M +  I P+ +T+  L+  + ++GN      + +
Sbjct: 835  IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 894

Query: 392  RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE--MKGKNLSPNVYTFTILINALCK 449
             M + G   D + +  +   YC+ G+  + LKL ++  ++G  L  +V  F  LI  LCK
Sbjct: 895  DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV--FDALIFHLCK 952

Query: 450  ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            E +++     L ++   +L       N ++ GF K+GN DEA+ ++  M+     P  ++
Sbjct: 953  EKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 1012

Query: 510  FT 511
             T
Sbjct: 1013 LT 1014


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 189/346 (54%), Gaps = 4/346 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S F  N LL+ALV     D A   FK   R    PD +TFNI+I GL + G+++KA +  
Sbjct: 149 SAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVA 208

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE---LLKEVKFKSEFSPDVVTYTSVISG 341
            D+ ++G +P +VTYNT+I G C+     R +    LLKE+  ++  SP+ VT+  +++G
Sbjct: 209 KDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEM-VEAGISPNEVTFNVLVNG 267

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YCK      A  ++ EM   GI  S VT++ L+ G    G +     + + M   G +P+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           + T +S+++G+C+ G +       D M+ KN+ PNV T+TIL++   + +++ DA    +
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +    + P   +YN +I GF + G+    + ++ EM  K  + D VT+ +LI   C+KG
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            + +A+ + ++ML +G  P  +T N++I+   + G    A+ I  R
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTR 493



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 182/364 (50%), Gaps = 4/364 (1%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY---MFKEY 252
             +S   + G+   A  +    R   +  S   YN++++   K+  A    +   + KE 
Sbjct: 190 IVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEM 249

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
                 P+  TFN+L+ G  +      A   F +M   G +  +VTY+ L+ GLC   +V
Sbjct: 250 VEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKV 309

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
             G +L+ E+K      P++ T  SV++G+CK G M  A G  + M    +KP+ VT+ +
Sbjct: 310 EEGVKLVDEMK-DLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTI 368

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L+DG+ ++  M  A  ++E M   G  P+   ++ LI G+ RNG       L DEM+ K 
Sbjct: 369 LVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG 428

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  ++ T+ +LI ALC +  +  A + L ++    L P    YN +I+G+C+ GN+  A 
Sbjct: 429 VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAY 488

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            I   ME+ + + + VT+ + I   C  G+M E   + N+ML  G  P+ +T +++   +
Sbjct: 489 EIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM 548

Query: 553 LKGG 556
           ++ G
Sbjct: 549 MEKG 552



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 4/338 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHD---SVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           L  S  TYN ++   C+ G       V  +   M   G  PN       V+   +     
Sbjct: 216 LAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTA 275

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           AA  +  + +   +  S   Y++L+  L  +   +E V +  E   L   P+  T N ++
Sbjct: 276 AAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVL 335

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  + G +  A  +   M      P++VTY  L+ G  R++++ +    +KE       
Sbjct: 336 NGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKM-KDALAVKEAMSGKGV 394

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+   Y  +I+G+ + G     +G+ +EM   G++   VT+NVLI      G +  A  
Sbjct: 395 RPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVK 454

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + ML  G  P  +T++++I+GYC  G +    ++   M+      NV T+ + I  LC
Sbjct: 455 LLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLC 514

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +  ++ +    L ++    LVP    Y+ + +G  + G
Sbjct: 515 RMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 1/302 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C+     +   VF+ M+  G   +       V      GK +    L+ + 
Sbjct: 260 TFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEM 319

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  +    NS+LN   K+    +A        +   +P+  T+ IL+ G  R+ ++
Sbjct: 320 KDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKM 379

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A      M   G  P+   YN LI+G  R  +      LL E++ K     D+VTY  
Sbjct: 380 KDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG-VRADIVTYNV 438

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C  G++ KA  + +EM   G++P  +T+N +I+G+ + GN+ SA  +R RM    
Sbjct: 439 LIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGK 498

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +VVT++  I   CR G++ +  +L +EM  K L PN  T+  +   + ++    D R
Sbjct: 499 KRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVR 558

Query: 458 RF 459
            F
Sbjct: 559 GF 560



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 22/272 (8%)

Query: 155 SFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           S  TY+ ++  LC  G + + V++V D M+  G +PN   +   ++   + G    A+G 
Sbjct: 292 SVVTYSALVWGLCSEGKVEEGVKLV-DEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGW 350

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           +       V  +   Y  L++   + +   +A+ + +       +P+   +N LI G +R
Sbjct: 351 IDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTR 410

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G+ +       +M   G   DIVTYN LI  LC   EV +  +LL E+       P  +
Sbjct: 411 NGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEM-LMVGLEPVHL 469

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM---------- 383
           TY ++I+GYC+ G +  A  I   M     + + VT+NV I    ++G M          
Sbjct: 470 TYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEM 529

Query: 384 ---------VSAEYMRERMLSFGYLPDVVTFS 406
                    V+ + ++E M+  GY PDV  F+
Sbjct: 530 LEKGLVPNGVTYDTIKEGMMEKGYTPDVRGFT 561


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 204/381 (53%), Gaps = 7/381 (1%)

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           S ++E FV    +  K   A G+L+         + + YN LL  L +     +AV + +
Sbjct: 111 SGLLECFV----QMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLR 166

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E  +    PD  ++N +I+G     E++KA +   +M   GCS  +VT+  LI   C+  
Sbjct: 167 EMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAG 226

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           ++     LLKE+K K     D++ YTS+I G+C  G++D+   +++E+   G  P A+T+
Sbjct: 227 KMDEAMGLLKEMKHKG-LEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N LI GF K+G +  A  + E M+  G  P+V T++ LIDG C  G+  + L+L + M  
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQ 345

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           K+  PNV T+ I+IN LCK++ + DA   ++ +K     P    YN ++ G C  G++DE
Sbjct: 346 KDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDE 405

Query: 491 ANVIVAEM--EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           A+ ++  M  +     PD ++F  LI G C   R+ +A+ I++ ++    A D +T N L
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNIL 465

Query: 549 ISCLLKGGMPNEAFRIMQRAS 569
           ++  LK G  N+A  + ++ S
Sbjct: 466 LNSTLKSGDVNKAMELWKQIS 486



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 199/447 (44%), Gaps = 38/447 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+R  CE    +    + + M+  G   +       + +  +AGK D A GLL + 
Sbjct: 179 SYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEM 238

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +     +Y SL+         D    +F E       P   T+N LI+G  ++G +
Sbjct: 239 KHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRL 298

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E F  M   G  P++ TY  LI GLC V +     +LL  +  K E  P+VVTY  
Sbjct: 299 KEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE-EPNVVTYNI 357

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--S 395
           +I+  CK   +  A  I   M     +P  +T+N L+ G    G++  A  +   ML  S
Sbjct: 358 IINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD----------------------------- 426
               PDV++F++LI G C+  +L+Q L + D                             
Sbjct: 418 SYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNK 477

Query: 427 ------EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
                 ++    + PN  T+T +I+  CK   LN A+  L +++ ++L P  F YN ++ 
Sbjct: 478 AMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLS 537

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             CK G +D+A  +  EM+     PD ++F I+I G    G +  A S+   M   G +P
Sbjct: 538 SLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSP 597

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           D  T + LI+  LK G  +EA     +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDK 624



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 199/406 (49%), Gaps = 2/406 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L      Y  ++R  C+ G  D  + +FD +   G  P +      +    + G+   A 
Sbjct: 243 LEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEAS 302

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +        V  + + Y  L++ L       EA+ +     +   +P+  T+NI+I  L
Sbjct: 303 EIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKL 362

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS-P 330
            +   V  A E    M      PD +TYN+L+ GLC   ++    +LL  +   S ++ P
Sbjct: 363 CKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DV+++ ++I G CK  ++ +A  IY+ +         VT N+L++   K G++  A  + 
Sbjct: 423 DVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELW 482

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           +++ +   +P+  T++++IDG+C+ G LN    L  +M+   L P+V+ +  L+++LCK+
Sbjct: 483 KQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKK 542

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             L+ A R  ++++ +D  P    +N +IDG  KAG++  A  ++  M      PD  T+
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTY 602

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS-CLLKG 555
           + LI      G + EAIS F+KM+  G  PD    +S++  C+ +G
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQG 648



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 180/352 (51%), Gaps = 1/352 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           +F  N+L+  LV+  N + A   +++     +  +  + + L++   ++ +   A     
Sbjct: 72  SFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLA 131

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M   G + ++  YN L+ GLCR  E  +   LL+E++ ++   PDVV+Y +VI G+C+ 
Sbjct: 132 LMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMR-QNSLMPDVVSYNTVIRGFCEG 190

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            +++KA  + NEM   G   S VT+ +LID F K G M  A  + + M   G   D++ +
Sbjct: 191 KELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVY 250

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +SLI G+C  G+L++G  L DE+  +  SP   T+  LI   CK  RL +A    + +  
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMME 310

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             + P  + Y  +IDG C  G   EA  ++  M +K  +P+ VT+ I+I   C    + +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVAD 370

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           A+ I   M +    PD+IT NSL+  L   G  +EA +++    +D +   P
Sbjct: 371 ALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 184/418 (44%), Gaps = 43/418 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++R  C++G       +F++M   G  PN       +      GK   A  LL+  
Sbjct: 284 TYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   YN ++N L K +   +A+ + +   +  ++PD  T+N L+ GL   G++
Sbjct: 344 LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDL 403

Query: 278 KKAFEFFYDM--GSFGCSPDIVTYNTLISGLCRVN------------------------- 310
            +A +  Y M   S    PD++++N LI GLC+ N                         
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTN 463

Query: 311 ----------EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
                     +V +  EL K++   S+  P+  TYT++I G+CK G ++ A G+  +M  
Sbjct: 464 ILLNSTLKSGDVNKAMELWKQIS-NSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRL 522

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             + PS   +N L+    K G +  A  + E M      PDV++F+ +IDG  + G +  
Sbjct: 523 SELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKS 582

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              L   M    LSP+++T++ LIN   K   L++A  F  ++  +   P   + + V+ 
Sbjct: 583 AESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLK 642

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDK-VTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
                G  D+    V ++ +K    DK +T T++       G M     I  ++LR+ 
Sbjct: 643 YCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNM----DIAKRLLRVA 696


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 207/407 (50%), Gaps = 20/407 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGLL 214
           Y+ ++ SLC+ G H   Q +F  M+  G  P+    + MI  F SS    G+   A+ LL
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS----GRWSDAEQLL 313

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    +++     YN+L+NA VK+    EA  ++ E       P+T T+N +I G  + 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +  A + FY M + GCSPD+ T+ TLI G C    +  G ELL E+  +     + VT
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP-RRGLVANTVT 432

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+C +G ++ A  +  +M S G+ P  VT N L+DG    G +  A  M + M 
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492

Query: 395 SF-----------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                        G  PDV+T++ LI G    G+  +  +L +EM  + + P+  T++ +
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK++RL++A +    +      P    +N +I+G+CKAG VD+   +  EM  +  
Sbjct: 553 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             D + +  LI G    G +  A+ IF +M+  G  PD IT+ ++++
Sbjct: 613 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 206/422 (48%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C+ G   S   +   M    H+ PN  +    + S  + G+   A+ L ++
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +    F YNS++          +A  + +E       PD  T+N LI    + G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TYN++I G C+ + +    ++   +  K   SPDV T+T
Sbjct: 341 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG-CSPDVFTFT 399

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D    + +EM   G+  + VT+N LI GF  VG++ +A  + ++M+S 
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 459

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL-----------SPNVYTFTILIN 445
           G  PD+VT ++L+DG C NG+L   L++   M+   +            P+V T+ ILI 
Sbjct: 460 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +IDG CK   +DEA  +   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 579

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTF  LI G+C  GR+ + + +F +M R G   D I   +LI    K G  N A  I 
Sbjct: 580 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 639

Query: 566 QR 567
           Q 
Sbjct: 640 QE 641



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 180/352 (51%), Gaps = 3/352 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           + +LL+ L  ++   EA+  F + F    +P+  TF  L+ GL R G + +A      M 
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P  +TY T++ G+C+  +      LL++++  S   P+VV Y+++I   CK G+ 
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  ++ EM   GI P   T+N +I GF   G    AE + + ML     PDVVT+++L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ + + G+  +  +L DEM  + + PN  T+  +I+  CK++RL+ A      +     
Sbjct: 332 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 391

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  F +  +IDG+C A  +D+   ++ EM  +    + VT+  LI G C+ G +  A+ 
Sbjct: 392 SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 451

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           +  +M+  G  PD +T N+L+  L   G   +A   F+ MQ++  D +   P
Sbjct: 452 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 503



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 194/401 (48%), Gaps = 7/401 (1%)

Query: 170 GLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
           GL D++ +  D +RS    P   +++F   +   +R  + D    L  +    ++    +
Sbjct: 59  GLEDAIDLFSDMLRSR---PLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            +N L+      +    A+  F +  +L   PD  TF  L+ GL     V +A +FF+ M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
               C P++VT+ TL++GLCR   +     LL  +  +    P  +TY +++ G CK G 
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MEDGLQPTQITYGTIVDGMCKKGD 234

Query: 348 MDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
              A  +  +M     I P+ V ++ +ID   K G    A+ +   M   G  PD+ T++
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           S+I G+C +G+ +   +L  EM  + +SP+V T+  LINA  KE +  +A     ++   
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPR 354

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            ++P    YN +IDGFCK   +D A  +   M  K C PD  TFT LI G+C   R+ + 
Sbjct: 355 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 414

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           + + ++M R G   + +T N+LI      G  N A  + Q+
Sbjct: 415 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 165/353 (46%), Gaps = 12/353 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +  + G       ++D M   G +PN+      +    +  + DAA+ +    
Sbjct: 327 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +   F + +L++        D+ + +  E  R     +T T+N LI G   +G++
Sbjct: 387 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF--------- 328
             A +    M S G  PDIVT NTL+ GLC   ++    E+ K ++ KS+          
Sbjct: 447 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ-KSKMDLDASHPFN 505

Query: 329 --SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PDV+TY  +I G    GK  +A  +Y EM   GI P  +T++ +IDG  K   +  A
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             M   M S  + P+VVTF++LI+GYC+ G+++ GL+L  EM  + +  +   +  LI  
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
             K   +N A    +++  + + P       ++ GF     ++ A  ++ +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 2/270 (0%)

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L SG   +  +    +L  ++  +S   P VV +  ++    ++ + D    +Y +M   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDM-LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            I+    +FN+LI  F     +  A     ++   G  PDVVTF++L+ G C   ++++ 
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L    +M      PNV TFT L+N LC+E R+ +A   L ++  + L P    Y  ++DG
Sbjct: 169 LDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 482 FCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            CK G+   A  ++ +MEE     P+ V ++ +I   C  GR  +A ++F +M   G  P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D  T NS+I      G  ++A +++Q   E
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 35/199 (17%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L  GF ++  +  A  +   ML    LP VV F  L+    R  + +  + L  +M+ K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  ++Y+F ILI   C  ++L                  PF  +         G + +  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKL------------------PFALSTF-------GKITKLG 144

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +           PD VTFT L+ G C++ R+ EA+  F++M    C P+ +T  +L++ L
Sbjct: 145 L----------HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGL 194

Query: 553 LKGGMPNEAFRIMQRASED 571
            + G   EA  ++ R  ED
Sbjct: 195 CREGRIVEAVALLDRMMED 213


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 223/443 (50%), Gaps = 17/443 (3%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++ S C+ G + +++Q++   M+  G LPN       V+    +G+ + AK L+ +
Sbjct: 192 TYNTMLDSFCKQGKVQEALQLLLQ-MQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQE 250

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + +S + Y+ L+    ++   DEA  + +E     + P   T+N ++ GL + G 
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGR 310

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A +    M +    PD+V+YNTLI G  R+  +     L  E++F+    P VVTY 
Sbjct: 311 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG-LVPSVVTYN 369

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G C++G +D A  + +EM   G  P   TF +L+ GF K+GN+  A+ + + ML+ 
Sbjct: 370 TLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR 429

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD   + + I G  + G  ++   + +EM  +   P++ T+ + I+ L K   L +A
Sbjct: 430 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEA 489

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              +K++ +N LVP    Y  +I     AG++ +A  +  EM  K   P  VT+T+LI  
Sbjct: 490 SELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHS 549

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE------ 570
           + ++GR+  AI  F +M   G  P+ IT N+LI+ L K    ++A++             
Sbjct: 550 YAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPN 609

Query: 571 --------DQNLQLPSWKKAVPL 585
                   ++N  L  W++A+ L
Sbjct: 610 KYTYTILINENCNLGHWQEALRL 632



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 194/407 (47%), Gaps = 1/407 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + L L  S  TY+ ++R  CE G  D    + + M S G +P        +    + G+ 
Sbjct: 252 LRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRV 311

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A+ LL       +      YN+L+    +  N  EA  +F E       P   T+N L
Sbjct: 312 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTL 371

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL R+G++  A     +M   G  PD+ T+  L+ G C++  +    EL  E+     
Sbjct: 372 IDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM-LNRG 430

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD   Y + I G  KLG   KA G+  EM + G  P  +T+NV IDG  K+GN+  A 
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 490

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + ++ML  G +PD VT++S+I  +   G L +   +  EM  K + P+V T+T+LI++ 
Sbjct: 491 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSY 550

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
               RL  A     ++    + P    YN +I+G CK   +D+A     EM+ K   P+K
Sbjct: 551 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNK 610

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            T+TILI  +C  G   EA+ ++  ML     PD  T ++L+  L K
Sbjct: 611 YTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 165/305 (54%), Gaps = 2/305 (0%)

Query: 259 PDTWTFNILIQGL-SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           PD    N +++ L  R   +  A E +  M   G  P +VTYNT++   C+  +V    +
Sbjct: 152 PDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQ 211

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           LL +++ K    P+ VTY  +++G    G++++A  +  EM   G++ SA T++ LI G+
Sbjct: 212 LLLQMQ-KMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGY 270

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G +  A  + E MLS G +P +VT+++++ G C+ G+++   KL D M  KNL P++
Sbjct: 271 CEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDL 330

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            ++  LI    +   + +A     +L++  LVP    YN +IDG C+ G++D A  +  E
Sbjct: 331 VSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDE 390

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M +    PD  TFTIL+ G C  G +  A  +F++ML  G  PD     + I   LK G 
Sbjct: 391 MIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGD 450

Query: 558 PNEAF 562
           P++AF
Sbjct: 451 PSKAF 455



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 4/329 (1%)

Query: 132 RLDNPKLGLKFLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           RL N  +G  FL F+ +    L  S  TYN ++  LC MG  D    + D M   G  P+
Sbjct: 342 RLGN--IGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPD 399

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                  V    + G    AK L  +     +    F Y + +   +K  +  +A  M +
Sbjct: 400 VFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQE 459

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E       PD  T+N+ I GL ++G +K+A E    M   G  PD VTY ++I       
Sbjct: 460 EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 519

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
            + +   +  E+  K  F P VVTYT +I  Y   G++  A   + EM+  G+ P+ +T+
Sbjct: 520 HLRKARAVFLEMLSKGIF-PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N LI+G  KV  M  A      M + G  P+  T++ LI+  C  G   + L+L  +M  
Sbjct: 579 NALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRF 459
           + + P+  T + L+  L K+ + +  R  
Sbjct: 639 REIQPDSCTHSALLKHLNKDYKSHVVRHL 667


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 189/351 (53%), Gaps = 10/351 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +  LL+A+VK      AV    +   L    PD +T +ILI   S +  V  AF  F  M
Sbjct: 97  FTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKM 156

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  PD VT+NTLI+GLC+V + A+  E   + +  S   P V TYT++I+G CK+G+
Sbjct: 157 IKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE-ASGCQPTVYTYTTIINGLCKIGE 215

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA----EYMRERMLSFGYLPDVV 403
              A G++ +M   G +P+ VT+N+LID   K   +  A     YM+ + +S    PD+ 
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRIS----PDIF 271

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T++SLI G C   +  +   L +EM   N+ PN++TF +L++A+CKE ++++A+   K +
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    Y+ ++ G+     + EA  +   M  K CKPD  ++ ILI G+C   R+
Sbjct: 332 TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRI 391

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            EA  +FN+M+  G  PD++  N+LI  L + G   EA  + +    + NL
Sbjct: 392 DEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNL 442



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 182/359 (50%), Gaps = 1/359 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC++G   +   +F  M   G  PN       + S  +    + A  + S  
Sbjct: 202 TYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM 261

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   ++   F YNSL+  L       EA  +  E   L   P+ +TFN+L+  + + G+V
Sbjct: 262 KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  PD+VTY++L+ G     E+    +L   +  K    PD  +Y  
Sbjct: 322 SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKG-CKPDAFSYNI 380

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK  ++D+A  ++NEM   G+ P  V +N LI G  ++G +  A+ + + M S G
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD+ T+S L+DG+C+ G L +  +L   M+   L P++  + ILI+A+CK   L DAR
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +   +L    L+P   +Y  +I+  CK G +DEA      ME   C PD+ ++ ++I G
Sbjct: 501 KLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRG 559



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 177/348 (50%), Gaps = 6/348 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +P  VT     +N+L+N L K     +AV  F ++     QP  +T+  +I GL +IGE
Sbjct: 161 LQPDAVT-----FNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGE 215

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A   F  M   GC P++VTYN LI  LC+   V    ++   +K K   SPD+ TY 
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK-RISPDIFTYN 274

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I G C   +  +A+ + NEM S  I P+  TFNVL+D   K G +  A+ + + M   
Sbjct: 275 SLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM 334

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDVVT+SSL+ GY    ++ +  KL D M  K   P+ +++ ILI   CK  R+++A
Sbjct: 335 GVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++   ++    L P    YN +I G C+ G + EA  +   M      PD  T+++L+ G
Sbjct: 395 KQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDG 454

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            C +G + +A  +F  M      PD    N LI  + K G   +A ++
Sbjct: 455 FCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKL 502



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 209/419 (49%), Gaps = 2/419 (0%)

Query: 137 KLGLKFLEFSR-VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           ++ L F  FS+ + L L     T+N ++  LC++G        FD   + G  P      
Sbjct: 145 RVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYT 204

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             ++   + G+  AA GL  +        +   YN L+++L K    +EA+ +F      
Sbjct: 205 TIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK 264

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              PD +T+N LIQGL      K+A     +M S    P+I T+N L+  +C+  +V+  
Sbjct: 265 RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEA 324

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             + K +  +    PDVVTY+S++ GY    ++ +A  +++ M + G KP A ++N+LI 
Sbjct: 325 QGVFKTMT-EMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIK 383

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G+ K   +  A+ +   M+  G  PD V +++LI G C+ G+L +   L   M      P
Sbjct: 384 GYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP 443

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +++T+++L++  CKE  L  A R  + ++   L P   MYN +ID  CK GN+ +A  + 
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +E+  +   P+   +T +I   C +G + EA+  F  M   GC PD+ + N +I   L+
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQ 562



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 180/349 (51%), Gaps = 11/349 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD-----AAKG 212
           TYN+++ SLC+  L +    +F YM++    P     + F  + +  G C+      A  
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISP-----DIFTYNSLIQGLCNFRRWKEASA 291

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL++     +  + F +N L++A+ K+    EA  +FK    +  +PD  T++ L+ G S
Sbjct: 292 LLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYS 351

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
              E+ +A + F  M + GC PD  +YN LI G C+   +    +L  E+  +   +PD 
Sbjct: 352 LRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG-LTPDN 410

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           V Y ++I G C+LG++ +A  ++  M+S G  P   T+++L+DGF K G +  A  +   
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S    PD+  ++ LID  C+ G L    KL  E+  + L PNV  +T +IN LCKE  
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           L++A    + ++ +   P  F YN +I GF +  +   A  ++ EM ++
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDR 579



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 165/322 (51%), Gaps = 2/322 (0%)

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA-FEFFYDMGSFGCSPDIVTY 299
           N D+A+  F         P    F  L+  + ++G+   A       M   G SPDI T 
Sbjct: 74  NIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTL 133

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + LI     +  V     +  ++  K    PD VT+ ++I+G CK+GK  +A   +++  
Sbjct: 134 SILIDCFSHLQRVDLAFSVFSKM-IKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE 192

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           + G +P+  T+  +I+G  K+G   +A  + ++M   G  P+VVT++ LID  C++  +N
Sbjct: 193 ASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVN 252

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L +   MK K +SP+++T+  LI  LC   R  +A   L ++   +++P  F +N ++
Sbjct: 253 EALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLV 312

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G V EA  +   M E   +PD VT++ L+ G+ ++  +VEA  +F+ M+  GC 
Sbjct: 313 DAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCK 372

Query: 540 PDDITVNSLISCLLKGGMPNEA 561
           PD  + N LI    K    +EA
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEA 394



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 1/242 (0%)

Query: 330 PDVVTYTSVISGYCKLGKMDKAT-GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           P ++ +T ++S   K+G+   A   +  +M   G+ P   T ++LID F  +  +  A  
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M+  G  PD VTF++LI+G C+ G+  Q ++  D+ +     P VYT+T +IN LC
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K      A    K+++     P    YN +ID  CK   V+EA  I + M+ KR  PD  
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+  LI G C   R  EA ++ N+M  +   P+  T N L+  + K G  +EA  + +  
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331

Query: 569 SE 570
           +E
Sbjct: 332 TE 333



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 36/319 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++ LC          + + M S   +PN       V +  + GK   A+G+    
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331

Query: 218 -----RPGEVTMSTFMY------------------------------NSLLNALVKQNNA 242
                 P  VT S+ MY                              N L+    K    
Sbjct: 332 TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRI 391

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           DEA  +F E       PD   +N LI GL ++G +++A + F +M S G  PD+ TY+ L
Sbjct: 392 DEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSML 451

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + G C+   + +   L + ++  +   PD+  Y  +I   CK G +  A  +++E+   G
Sbjct: 452 LDGFCKEGYLGKAFRLFRVMQ-STYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P+   +  +I+   K G +  A      M   G  PD  +++ +I G+ +    ++  
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAA 570

Query: 423 KLCDEMKGKNLSPNVYTFT 441
           +L  EM+ +       T T
Sbjct: 571 QLIGEMRDRGFVAEAGTTT 589


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 213/437 (48%), Gaps = 12/437 (2%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            + YN+V+  LC+    D    +F+ M      P+S      +    +AGK + A+ L  
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     VT ST  Y SL++ L   N+ D+A  +F +  R    P   T+N++I    + G
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +++A +    M   G  PD+VTYNT++ GLC+ + V     L  E++ +   +P+  ++
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME-RLGCTPNRRSH 466

Query: 336 TSVISGYCKL---------GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            ++I G C+          GK+D+A  +   M   G  P  VT++ LI G   +  +  A
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
            ++ E M+     P VVT ++LI G C+ G++ +  ++ D M     SP+V T+  L++ 
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            C+  +   AR  L  +    L P    Y  ++ G CKA  + EA  + A+M+   C P+
Sbjct: 587 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 646

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             T+T LI+G C  G++   + +F +M+  G +PD +   +L + L K G    A  I++
Sbjct: 647 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 706

Query: 567 RASEDQNLQLPSWKKAV 583
              E  +L+  +W   V
Sbjct: 707 EGRE--SLRSEAWGDEV 721



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 209/454 (46%), Gaps = 48/454 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP---------------------------- 189
           T+  ++  LC+ G  D  ++V D MRS    P                            
Sbjct: 81  TFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIM 140

Query: 190 ---NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
              NS      V +  +A + D A  L        + ++    +S+L  L+     DEA+
Sbjct: 141 PVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEAL 200

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +++E  R   +P   T N+L++G    G+V KA E    M    C+PD V+Y T++ GL
Sbjct: 201 QVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGL 257

Query: 307 C---RVNEVAR--GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           C   RV E  R  G   L      S   P +  Y  VI G C+  ++D+A  ++ +MN  
Sbjct: 258 CKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNER 317

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            + P + ++ +LIDG  K G +  A  + +++L  G  P  V ++SLI G C     +  
Sbjct: 318 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 377

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +L  +M  +   P+  T+ ++I+A CK   L +A   +K++  +  VP    YN V+DG
Sbjct: 378 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 437

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG---------HCMKGRMVEAISIFNK 532
            CK+  V+EA ++  EME   C P++ +   +I+G          C +G++ EA  +  +
Sbjct: 438 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKR 497

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           M   G  PD +T ++LIS L      ++A  +++
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 531



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 192/396 (48%), Gaps = 22/396 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ + C+ G+ +    +   M  DGH+P+       +    ++ + + A  L ++ 
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK--EYFRLYSQ-------PDTWTFNILI 268
                T +   +N+++  L +Q+  D+A    K  E FRL  +       PD  T++ LI
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 514

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL  I  V  A     DM    C P +VT NTLI GLC+   +    E+L +    S  
Sbjct: 515 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL-DAMVSSGQ 573

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SPDVVTY +++ G+C+ G+ ++A  + ++M + G+ P+ VT+  L+ G  K   +  A  
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M S G  P++ T+++LI G+C  GQ++ GLKL  EM    +SP+   +  L   LC
Sbjct: 634 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 693

Query: 449 KENR-------LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           K  R       L + R  L+   W D V     Y   +DG  +AG ++ A   V +M   
Sbjct: 694 KSGRSARALEILREGRESLRSEAWGDEV-----YRFAVDGLLEAGKMEMALGFVRDMVRG 748

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
              P       L+ G C  G+  EA ++  +++ + 
Sbjct: 749 GQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 784



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 190/422 (45%), Gaps = 15/422 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +  V++  C +G       +F  M  + H P   +    + S  +  + +A K ++    
Sbjct: 13  FTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMV 71

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                  +F + ++L  L K    DEA  +  E       P   T + L   L   G ++
Sbjct: 72  DRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSME 131

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AF+    M     S     YN ++  LC+   V    EL + +  K        +  SV
Sbjct: 132 RAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEK-RIPLAAGSLDSV 186

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G    G++D+A  +Y E      +P  VT NVL++GF   G +  A  +   M     
Sbjct: 187 LVGLMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEEC 243

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK------GKNLSPNVYTFTILINALCKENR 452
            PD V++ +++DG C+ G++ + ++L  + +        +  P++  + I+I  LC+ +R
Sbjct: 244 APDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDR 303

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A +  +++   ++ P  + Y  +IDG  KAG +++A  +  ++      P  V +T 
Sbjct: 304 IDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTS 363

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           LI G CM     +A  +F  M R GC P  +T N +I    K GM  EA  ++++  ED 
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423

Query: 573 NL 574
           ++
Sbjct: 424 HV 425



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 37/273 (13%)

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
           F+    P  + +TSVI G+C +G+  +A  I++ M  C   P    +NVLID   K    
Sbjct: 2   FQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQET 60

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            + + M + M+  G  PD  TF++++ G C+ G++++   + DEM+ + + P   T + L
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
            + LC    +  A + L+ +     V     YN V+   CKA  VD+A  +   M EKR 
Sbjct: 121 AHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEKRI 176

Query: 504 --------------------------------KPDKVTFTILIIGHCMKGRMVEAISIFN 531
                                           +P  VT  +L+ G C +G++ +A  +  
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLR 236

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            M    CAPD+++  +++  L K G   EA R+
Sbjct: 237 AMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRL 269



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 5/180 (2%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  P  + F+S+I G+C  G+  + +K+   M+ +  SP    + +LI++L K   
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLME-ECHSPYPDVYNVLIDSLSKRQE 59

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
               ++ ++ +      P  F +  ++ G CKAG +DEA +++ EM  +   P   T + 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           L    C++G M  A     ++L I    +    N ++  L K    ++A  + +  SE +
Sbjct: 120 LAHELCLRGSMERAF----QLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKR 175


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 213/420 (50%), Gaps = 11/420 (2%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N  +  L   G H     +F   R +  +PN       +    +AGK D A  LL + R 
Sbjct: 2   NCALNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +     ++N ++  L K     +A+  FK        PD  TFNIL+  L + G V++
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 280 AFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           AF+ F  M  S  C P++VTY T+I+GLC+  ++ R  ELL ++  ++   P+V+TY+ +
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL-DLMNETGCCPNVITYSVL 177

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G CK G+ DK   +  EM   G +P  + +N L++G  K   +  A  + + M+  G 
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P VVT++SL++ +CR+ Q+++  +L   M  +   P+V  +  +I  LC++ RL+DA+ 
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD------EANVIVAEMEEKRCKPDKVTFTI 512
            LKQ+     VP    Y+ +IDG CK   VD       A  I+  M++  C P+  T+ +
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +I G C   +  +A+++  +M+     PD  + + +I  L K    + A++I    SE +
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 205/421 (48%), Gaps = 10/421 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+ G  D    + D MR  G  P   +    +    +AG+   A G     
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIG 275
              + T     +N L++ALVK    +EA  +F E     SQ  P+  T+  +I GL + G
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIF-ESMHTSSQCLPNVVTYTTVINGLCKDG 150

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++ +A E    M   GC P+++TY+ L+ GLC+     +G  LL+E+  +  F PDV+ Y
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG-FQPDVIMY 209

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++++G CK  ++D+A  +   M   G  P+ VT+N L++ F +   +  A  + + M  
Sbjct: 210 NTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSE 269

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR--- 452
            G  PDV+ ++++I G CR+ +L+    L  +M      P+V T++ +I+ LCK+ R   
Sbjct: 270 RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDA 329

Query: 453 ---LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L  A   L+ +K     P    Y  VI+G C+A    +A  ++  M +    PD  +
Sbjct: 330 DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           F+++I   C    +  A  IF  M    C P+ +   +LI  L KGG  ++A R+ +   
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV 449

Query: 570 E 570
           E
Sbjct: 450 E 450



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 192/419 (45%), Gaps = 8/419 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+ G  D    + D M   G  PN       V    +AG+ D    LL + 
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     MYN+LLN L K    DEA+ + +   R    P   T+N L++   R  +V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF     M   GC PD++ YNT+I+GLCR   +     LLK++   +   PDV+TY++
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM-VAARCVPDVITYST 316

Query: 338 VISGYCKLGKMD------KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +I G CK  ++D       A  I   M   G  P+A T+ V+I+G  +      A  +  
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RM+    +PD+ +FS +I   C++  L+   K+   M  +   PN   +  LI+ L K  
Sbjct: 377 RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            ++ A R   +L      P    YN V+DG C  G ++EA  +V  M  K C PD  ++ 
Sbjct: 437 EVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYG 495

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            LI G C    + EA  +F  +   G A +    N L++ L K    ++A  +  +  E
Sbjct: 496 ALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 200/416 (48%), Gaps = 9/416 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N+++ +L + G  +    +F+ M +    LPN       ++   + GK D A  LL  
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y+ L+  L K    D+   + +E  R   QPD   +N L+ GL +   
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A E    M   GC P +VTYN+L+   CR  +V R   L+ +V  +    PDV+ Y 
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLI-QVMSERGCPPDVINYN 280

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK------VGNMVSAEYMR 390
           +VI+G C+  ++D A  +  +M +    P  +T++ +IDG  K         + +A  + 
Sbjct: 281 TVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E M   G  P+  T++ +I+G CR  +  Q L L   M    + P++ +F+++I +LCK 
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           + L+ A +    +   +  P P  Y  +IDG  K G VD+A V V E+  +  +P   T+
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA-VRVFELMVESFRPGVATY 459

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             ++ G C  GR+ EA+ +   M+   C PD  +  +LI  L +     EA+ + Q
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQ 515



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 14/274 (5%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS------VQVVFDYMRSD 185
           RLD+ +  LK +  +R          TY+ ++  LC+    D+         + + M+  
Sbjct: 291 RLDDAQALLKQMVAARCV----PDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  PN+      +    RA K   A  LL +    EV      ++ ++ +L K ++ D A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLIS 304
             +F        +P+   +  LI GLS+ GEV KA   F  M  SF   P + TYN+++ 
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF--RPGVATYNSVLD 464

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC V  +     +++ +  K  F PD  +Y ++I G C++  +++A  ++  + + G  
Sbjct: 465 GLCGVGRIEEAVRMVEGMIHKECF-PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFA 523

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
                +NVL++   K   +  A  +  +++  GY
Sbjct: 524 MEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 215/442 (48%), Gaps = 34/442 (7%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-NSPMIEFFVSSCIRAGKCDAAKGL 213
           S KT+NLV+  LC+ G   +    F+ +R    +P ++      ++  ++AG    A  L
Sbjct: 189 SLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS--MPVSAATFSILINGLVKAGMMIQAHSL 246

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +      T+    Y +++N L K     EAV + ++       P   T+N L+ GL +
Sbjct: 247 AQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCK 306

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G +++A +    +   GC+PD+VTY +LI GL +       ++L KE+  +   + D V
Sbjct: 307 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRG-LALDTV 365

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            YT++I G  + GK+ +A+ +Y  M S G  P  VT + +IDG  K G + +A  + + M
Sbjct: 366 CYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 425

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + G  P+ V +S+LI G C+  +++  L++  +MK    +P+  T+ ILI+ LCK   +
Sbjct: 426 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 485

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR----------C 503
             AR F  ++      P  + YN +I G CKAGN D A  ++ +M   R          C
Sbjct: 486 EAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLC 545

Query: 504 KPDKV-------------------TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           K  K+                   T T LI   C   R+ EA+S+FN + + G  P    
Sbjct: 546 KSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYA 604

Query: 545 VNSLISCLLKGGMPNEAFRIMQ 566
            NS+IS L+K G  NE   + Q
Sbjct: 605 YNSIISALIKSGKVNEGQAVYQ 626



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 200/409 (48%), Gaps = 10/409 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN ++  LC+MG  +    +   +  +G  P+       +    +  +   A  L 
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     + + T  Y +L+  L++     +A  ++K        PD  T + +I GLS+ 
Sbjct: 353 KEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 412

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +  A   F  M + G +P+ V Y+ LI GLC+  ++    E+L ++K K+  +PD +T
Sbjct: 413 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK-KAFCTPDTIT 471

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I G CK G ++ A   ++EM   G KP   T+N+LI G  K GN  +A  + + M 
Sbjct: 472 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMS 531

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S  ++     +SSL+DG C++G+L  G  L  EM+   ++ N  T T LI  LCK NR++
Sbjct: 532 SSRFV-----YSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVD 585

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A      ++  + +P P+ YN +I    K+G V+E   +  EM  +  KPD+VT+  L+
Sbjct: 586 EAVSLFNAIR-KEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALL 643

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            G     RM  A   + +M   G  P    ++ L    LK  MP  A R
Sbjct: 644 NGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLADDRLK-DMPGPASR 691



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 178/345 (51%), Gaps = 4/345 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQP-DTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +N +L+ L K      A+  F+   R  S P    TF+ILI GL + G + +A     + 
Sbjct: 193 HNLVLHGLCKSGKVLAAMDHFEAVRR--SMPVSAATFSILINGLVKAGMMIQAHSLAQET 250

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            + GC+ DI TY  +++ L +  ++     L++++      +P + TY ++++G CK+G+
Sbjct: 251 TTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG-CTPTIATYNALLNGLCKMGR 309

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +++A  +  ++   G  P  VT+  LIDG GK      A  + + M S G   D V +++
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTA 369

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI G  + G++ Q   +   M      P+V T + +I+ L K  R+  A R  K ++   
Sbjct: 370 LIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 429

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P   +Y+ +I G CKA  +D A  ++A+M++  C PD +T+ ILI G C  G +  A 
Sbjct: 430 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 489

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           + F++ML  GC PD  T N LIS L K G  + A  ++   S  +
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR 534



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 167/349 (47%), Gaps = 16/349 (4%)

Query: 233 LNALVKQNNADEAVYMFK---------EYFRLYSQP------DTWTFNILIQGLSRIGEV 277
           L+ L ++ + D  V +F+         E F+  S P         T N L+   +R    
Sbjct: 76  LDRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRH 135

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     +  +    PD+ T+N LI+G C   E      +++E++     +P + T+  
Sbjct: 136 REAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNL 195

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G CK GK+  A   +  +    +  SA TF++LI+G  K G M+ A  + +   + G
Sbjct: 196 VLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNG 254

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+ T++++++   +N ++ + + L +++     +P + T+  L+N LCK  RL +A 
Sbjct: 255 CTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 314

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++  N   P    Y  +IDG  K     EA  +  EM  +    D V +T LI G 
Sbjct: 315 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 374

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              G++ +A S++  M   GC PD +T++++I  L K G    A RI +
Sbjct: 375 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 423


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 212/444 (47%), Gaps = 38/444 (8%)

Query: 155 SFKTYNLVMRSLCEMG--------------------LHDSVQVV---------------F 179
           S KT+NLV+  LC+ G                    +H    +V                
Sbjct: 129 SLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALM 188

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           + + ++G  P        ++   + G+ + A  LL +      T     Y SL++ L K+
Sbjct: 189 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 248

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
             + EA  +FKE        DT  +  LI+GL + G++ +A   +  M S GC PD+VT 
Sbjct: 249 KRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           +T+I GLC+   +     + K ++ +   +P+ V Y+++I G CK  KMD A  +  +M 
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDCALEMLAQMK 367

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                P  +T+N+LIDG  K G++ +A    + ML  G  PDV T++ L+ G+C+ G  +
Sbjct: 368 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTD 427

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
               + D+M   + SPNV T+  LI+ LCK  +L  A  + + +K     P  F+Y+ ++
Sbjct: 428 AACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLV 487

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG CK+G ++   ++  EME       + T T LI   C   R+ EA+S+FN + + G  
Sbjct: 488 DGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEG-M 545

Query: 540 PDDITVNSLISCLLKGGMPNEAFR 563
           P     NS+IS L+K    N   R
Sbjct: 546 PHPYAYNSIISTLIKSAKVNPCTR 569



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 198/401 (49%), Gaps = 2/401 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +T+N+++   C     +    V   M  D G  P+       +    ++GK  AA     
Sbjct: 95  ETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE 154

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                  T+    Y ++++ L K     +AV + ++       P   T+N L+ GL ++G
Sbjct: 155 TTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMG 214

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +++A +    +   GC+PD+VTY +LI GL +       ++L KE+  +     D V Y
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG-LVLDTVCY 273

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G  + GK+ +A+ +Y  M S G  P  VT + +IDG  K G + +A  + + M +
Sbjct: 274 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 333

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ V +S+LI G C+  +++  L++  +MK    +P+  T+ ILI+ LCK   +  
Sbjct: 334 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 393

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           AR F  ++      P  + YN ++ GFCKAGN D A  +  +M    C P+ VT+  LI 
Sbjct: 394 ARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLIS 453

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           G C + ++ +A   F  M   GC PD    +SL+  L K G
Sbjct: 454 GLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 211/444 (47%), Gaps = 14/444 (3%)

Query: 128 EVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           E+ + L +P+ G +            HS  T N ++        H     +     +   
Sbjct: 43  ELFQCLSSPRFGFQ------------HSVHTGNALLDVFARTKRHREAGNLLKNELATTF 90

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG-EVTMSTFMYNSLLNALVKQNNADEAV 246
           LP+       ++    A + + A  ++ +      V  S   +N +L+ L K      A+
Sbjct: 91  LPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAM 150

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
             F+         D  T+  ++  L++  +++ A      + + GC+P I TYN L++GL
Sbjct: 151 DHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL 210

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C++  +    +LL+++   +  +PDVVTYTS+I G  K  +  +A  ++ EM   G+   
Sbjct: 211 CKMGRLEEAIDLLRKI-VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLD 269

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            V +  LI G  + G +  A  + + M S G +PDVVT S++IDG C+ G++   +++  
Sbjct: 270 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 329

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M+ + L+PN   ++ LI+ LCK  +++ A   L Q+K     P    YN +IDG CK+G
Sbjct: 330 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           +V+ A     EM E  CKPD  T+ IL+ G C  G    A  +F+ M    C+P+ +T  
Sbjct: 390 DVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYG 449

Query: 547 SLISCLLKGGMPNEAFRIMQRASE 570
           +LIS L K     +A    Q   E
Sbjct: 450 TLISGLCKRRQLTKASLYFQHMKE 473



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 142/290 (48%), Gaps = 4/290 (1%)

Query: 280 AFEFFYDMGS--FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           A+E F  + S  FG    + T N L+    R         LLK  +  + F PDV T+  
Sbjct: 41  AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKN-ELATTFLPDVETWNV 99

Query: 338 VISGYCKLGKMDKATGIYNEMNS-CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +I+GYC   + ++A  +  EM    G+ PS  T N+++ G  K G +++A    E   + 
Sbjct: 100 LITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTN 159

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   D+ T+++++D   +N ++   + L +++     +P + T+  L+N LCK  RL +A
Sbjct: 160 GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 219

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L+++  N   P    Y  +IDG  K     EA  +  EM  +    D V +T LI G
Sbjct: 220 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRG 279

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               G++ +A S++  M   GC PD +T++++I  L K G    A RI +
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 329


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 207/401 (51%), Gaps = 1/401 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  +YN +M  L E G       VF  M++ G +P+       + S  R  +  +A  LL
Sbjct: 110 SVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLL 169

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +        ++   Y +++    ++N   EA  +F +  R+   PD  TFN L+  L + 
Sbjct: 170 NNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKK 229

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           GEV+++      +   G   ++ T+N  I GLCR   ++    +L  V  +   +PDVVT
Sbjct: 230 GEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSV-IREGLTPDVVT 288

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G CK   + +A    +++ + G++P   T+N LIDG+ K+G + +AE + +  +
Sbjct: 289 YNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAI 348

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G++PD  T+ SLI+G C+N ++++ L L +   GK L P V  + +LI  LC+E  + 
Sbjct: 349 CKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLIL 408

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + + ++  N      + YN VI+G CK G V +AN ++ +   K   PD  TF  LI
Sbjct: 409 QALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLI 468

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            G+C + +M   I I NKM   G  PD IT NS+++ L K 
Sbjct: 469 DGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKA 509



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 198/393 (50%), Gaps = 1/393 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +F+ M   G  P+       + +  + G+   ++ LL++     +  + F +N  +  L 
Sbjct: 203 LFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC 262

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           ++     A+ M     R    PD  T+N LI GL +   V +A ++ + + + G  PD  
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYNTLI G C++  +    ++L+    K  F PD  TY S+I+G C+  ++D+A  ++N 
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKG-FVPDEFTYCSLINGLCQNDEIDRALALFNA 381

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
               G+KP+ + +N+LI G  + G ++ A  M   M   G   D+ T++ +I+G C+ G 
Sbjct: 382 ALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGC 441

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++    L ++   K   P+V+TF  LI+  CK+ ++    + L ++  + + P    YN 
Sbjct: 442 VSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           V++G  KA   ++       M EK C P+K+T+ IL    C  G++ EA+ + +++L  G
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG 561

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             PD ++  ++IS     G    A+++ +R  E
Sbjct: 562 ITPDTVSFATIISGFANNGDLKGAYQLFRRMGE 594



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 195/418 (46%), Gaps = 18/418 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN ++  LC+       +     + + G  P+       +    + G    A+ +L   
Sbjct: 288 TYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGA 347

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P E     F Y SL+N L + +  D A+ +F        +P    +N+LI+GL 
Sbjct: 348 ICKGFVPDE-----FTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLC 402

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G + +A +   +M   GCS DI TYN +I+GLC++  V+  + L+ +   K  + PDV
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG-YVPDV 461

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+ ++I GYCK  KM+    I N+M S G+ P  +T+N +++G  K           E 
Sbjct: 462 FTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFET 521

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G +P+ +T++ L +  C+ G++N+ L L DE+  K ++P+  +F  +I+       
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGD 581

Query: 453 LNDA----RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           L  A    RR  +Q K +        YN +I+ F +  ++     +  EM    C PD  
Sbjct: 582 LKGAYQLFRRMGEQYKVSHTTAT---YNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTY 638

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           T+ ++I G C+ G          +M+  G  P   T   +I+CL      +EA  I+ 
Sbjct: 639 TYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIH 696



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 166/344 (48%), Gaps = 1/344 (0%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +Y   + +  ++    EAV +F+       +P   ++N ++  L   G  K+A + F  M
Sbjct: 78  VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            + G  PD+ T+   I   CR         LL  +        + V Y +V++G+ +   
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNM-VSQGCQLNAVAYCTVVAGFYEENY 196

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
             +A  ++N+M   GI P   TFN L+    K G +  +E +  ++L  G   ++ TF+ 
Sbjct: 197 RVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNI 256

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
            I G CR G L+  + + D +  + L+P+V T+  LI  LCK + + +A ++L +L    
Sbjct: 257 FIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG 316

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P  F YN +IDG+CK G +  A  I+     K   PD+ T+  LI G C    +  A+
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           ++FN  L  G  P  I  N LI  L + G+  +A ++M   SE+
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSEN 420



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 187/414 (45%), Gaps = 2/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+ ++ LC  G+      + D +  +G  P+       +    +      A+  L + 
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G +    F YN+L++   K      A  + +        PD +T+  LI GL +  E+
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F      G  P ++ YN LI GLC+   + +  +++ E+  ++  S D+ TY  
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMS-ENGCSSDIWTYNL 431

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G CK+G +  A  + N+  + G  P   TFN LIDG+ K   M +   +  +M S G
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV+T++S+++G  +  +    ++  + M  K   PN  T+ IL  +LCK  ++N+A 
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEAL 551

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIG 516
             + ++    + P    +  +I GF   G++  A  +   M E+ +      T+ I+I  
Sbjct: 552 DLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINA 611

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              K  +     +F +M   GCAPD  T   +I      G  +  ++ +    E
Sbjct: 612 FAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIE 665



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 152/314 (48%), Gaps = 2/314 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN++++ LC+ GL      + + M  +G   +       ++   + G    A  L++   
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                   F +N+L++   KQ   +  + +  + +     PD  T+N ++ GLS+  + +
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNE 513

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              E F  M   GC P+ +TYN L   LC+  +V    +L+ E+  K   +PD V++ ++
Sbjct: 514 DLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG-ITPDTVSFATI 572

Query: 339 ISGYCKLGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ISG+   G +  A  ++  M     +  +  T+N++I+ F +  ++   E +   M + G
Sbjct: 573 ISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGG 632

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T+  +IDG+C  G  + G K   EM  K   P++ TF  +IN LC ++R+++A 
Sbjct: 633 CAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAV 692

Query: 458 RFLKQLKWNDLVPK 471
             +  +  N +VP+
Sbjct: 693 DIIHFMVHNGIVPE 706



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 36/326 (11%)

Query: 279 KAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           KA E F  +    G    ++TY  +I  L           +L E +   + S     Y  
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIG 81

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +  Y + GK+ +A  ++  M+    +PS +++N +++   + G    A  +  RM + G
Sbjct: 82  AMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVG 141

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLS--------------------- 434
            +PDV TF+  I  +CR  + +  L+L + M  +G  L+                     
Sbjct: 142 IVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAY 201

Query: 435 ------------PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                       P+V TF  L++ LCK+  + ++ R L ++    +    F +N  I G 
Sbjct: 202 ELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGL 261

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+ G +  A  ++  +  +   PD VT+  LI G C    +VEA    +K++  G  PD 
Sbjct: 262 CRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDG 321

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRA 568
            T N+LI    K GM   A +I+Q A
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGA 347


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 213/420 (50%), Gaps = 11/420 (2%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N  +  L   G H     +F   R +  +PN       +    +AGK D A  LL + R 
Sbjct: 2   NCALNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +     ++N ++  L K     +A+  FK        PD  TFNIL+  L + G V++
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 280 AFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           AF+ F  M  S  C P++VTY T+I+GLC+  ++ R  ELL ++  ++   P+V+TY+ +
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL-DLMNETGCCPNVITYSVL 177

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G CK G+ DK   +  EM   G +P  + +N L++G  K   +  A  + + M+  G 
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P VVT++SL++ +CR+ Q+++  +L   M  +   P+V  +  +I  LC++ RL+DA+ 
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD------EANVIVAEMEEKRCKPDKVTFTI 512
            LKQ+     VP    Y+ +IDG CK   VD       A  I+  M++  C P+  T+ +
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +I G C   +  +A+++  +M+     PD  + + +I  L K    + A++I    SE +
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 205/421 (48%), Gaps = 10/421 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+ G  D    + D MR  G  P   +    +    +AG+   A G     
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIG 275
              + T     +N L++ALVK    +EA  +F E     SQ  P+  T+  +I GL + G
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIF-ESMHTSSQCLPNVVTYTTVINGLCKDG 150

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++ +A E    M   GC P+++TY+ L+ GLC+     +G  LL+E+  +  F PDV+ Y
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG-FQPDVIMY 209

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++++G CK  ++D+A  +   M   G  P+ VT+N L++ F +   +  A  + + M  
Sbjct: 210 NTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSE 269

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR--- 452
            G  PDV+ ++++I G CR+ +L+    L  +M      P+V T++ +I+ LCK+ R   
Sbjct: 270 RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDA 329

Query: 453 ---LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L  A   L+ +K     P    Y  VI+G C+A    +A  ++  M +    PD  +
Sbjct: 330 DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           F+++I   C    +  A  IF  M    C P+ +   +LI  L KGG  ++A R+ +   
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV 449

Query: 570 E 570
           E
Sbjct: 450 E 450



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 192/419 (45%), Gaps = 8/419 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+ G  D    + D M   G  PN       V    +AG+ D    LL + 
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     MYN+LLN L K    DEA+ + +   R    P   T+N L++   R  +V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF     M   GC PD++ YNT+I+GLCR   +     LLK++   +   PDV+TY++
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQM-VAARCVPDVITYST 316

Query: 338 VISGYCKLGKMD------KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +I G CK  ++D       A  I   M   G  P+A T+ V+I+G  +      A  +  
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RM+    +PD+ +FS +I   C++  L+   K+   M  +   PN   +  LI+ L K  
Sbjct: 377 RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGG 436

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            ++ A R   +L      P    YN V+DG C  G ++EA  +V  M  K C PD  ++ 
Sbjct: 437 EVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYG 495

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            LI G C    + EA  +F  +   G A +    N L++ L K    ++A  +  +  E
Sbjct: 496 ALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 200/416 (48%), Gaps = 9/416 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N+++ +L + G  +    +F+ M +    LPN       ++   + GK D A  LL  
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y+ L+  L K    D+   + +E  R   QPD   +N L+ GL +   
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A E    M   GC P +VTYN+L+   CR  +V R   L+ +V  +    PDV+ Y 
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLI-QVMSERGCPPDVINYN 280

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK------VGNMVSAEYMR 390
           +VI+G C+  ++D A  +  +M +    P  +T++ +IDG  K         + +A  + 
Sbjct: 281 TVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEIL 340

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E M   G  P+  T++ +I+G CR  +  Q L L   M    + P++ +F+++I +LCK 
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           + L+ A +    +   +  P P  Y  +IDG  K G VD+A V V E+  +  +P   T+
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA-VRVFELMVESFRPGVATY 459

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             ++ G C  GR+ EA+ +   M+   C PD  +  +LI  L +     EA+ + Q
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQ 515



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 14/274 (5%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS------VQVVFDYMRSD 185
           RLD+ +  LK +  +R          TY+ ++  LC+    D+         + + M+  
Sbjct: 291 RLDDAQALLKQMVAARCV----PDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  PN+      +    RA K   A  LL +    EV      ++ ++ +L K ++ D A
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLIS 304
             +F        +P+   +  LI GLS+ GEV KA   F  M  SF   P + TYN+++ 
Sbjct: 407 YKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF--RPGVATYNSVLD 464

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC V  +     +++ +  K  F PD  +Y ++I G C++  +++A  ++  + + G  
Sbjct: 465 GLCGVGRIEEAVRMVEGMIHKECF-PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFA 523

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
                +NVL++   K   +  A  +  +++  GY
Sbjct: 524 MEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 208/412 (50%), Gaps = 8/412 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++R+LC  G       V D M   G  P  PM    + +  RA     A G+L   
Sbjct: 113 TYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDL 172

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLS---R 273
                 +     N +L A+  Q   DEAV + ++    +  +PD  ++N +++GL    R
Sbjct: 173 HGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARR 232

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G V+   E   +M + GC P+IVT++TLI  LCR     R HE+  ++  +   +PDV 
Sbjct: 233 WGHVQDLME---EMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMA-EHGCAPDVR 288

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y ++I G CK  +++ A GI N M S G+ P+ V +N L+ G         AE +   M
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                  D VTF+ L+D  C+NG +++ +++ ++M      P+V T+T +IN  CKE  +
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A   L+ +      P    Y  V+ G C A    +A  ++++M ++ C P+ VTF  L
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I   C KG + +AI +  +ML  GC+PD I+ +++I  L K G  +EA  ++
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 188/380 (49%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++  LC  GL + V  V   M   G  P+  M    +    +  + + A+G+L++ 
Sbjct: 254 TFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRM 313

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +   YN+LL  L   +  +EA  +  E F      D  TFNIL+  L + G V
Sbjct: 314 PSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLV 373

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +  E    M   GC PD++TY T+I+G C+   +     LL+ +       P+ V+YT 
Sbjct: 374 DRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA-ACGCRPNTVSYTI 432

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G C   +   A  + ++M   G  P+ VTFN LI+   K G +  A  + ++ML  G
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++++S++IDG  + G  ++ L+L + M  K +SPN   ++ + +AL  E R+N   
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI 552

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  + ++   +     +YN VI   CK G  D A   +A M    C P++ T+TILI G 
Sbjct: 553 QMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G + EA  I  ++   G
Sbjct: 613 ASEGFVKEAQEILTELCSKG 632



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 191/408 (46%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+R LC       VQ + + M + G  PN       +    R G  +    + +Q 
Sbjct: 219 SYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQM 278

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     MY ++++ + K+   + A  +          P+   +N L++GL      
Sbjct: 279 AEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRW 338

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     +M    C  D VT+N L+  LC+   V R  E+L+++  +    PDV+TYT+
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQM-LEHGCMPDVITYTT 397

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+CK G +D+A  +   M +CG +P+ V++ +++ G       V AE +  +M+  G
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VTF++LI+  C+ G + Q ++L  +M     SP++ +++ +I+ L K    ++A 
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P   +Y+ +       G +++   +   +++   + D V +  +I   
Sbjct: 518 ELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSL 577

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +G    AI     M+  GC P++ T   LI  L   G   EA  I+
Sbjct: 578 CKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 172/381 (45%), Gaps = 35/381 (9%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V  + + Y  L+ AL  +    +A+ +  +  R    P    +++ ++   R    + A 
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               D+   GC+ D+   N ++  +C    V     LL+++       PDVV+Y +V+ G
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C   +      +  EM + G  P+ VTF+ LI    + G       +  +M   G  PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR---- 457
           V  ++++IDG C+  +L     + + M    LSPNV  +  L+  LC  +R  +A     
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 458 -------------------------------RFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
                                            L+Q+  +  +P    Y  VI+GFCK G
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +DEA +++  M    C+P+ V++TI++ G C   R V+A  + ++M++ GC P+ +T N
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
           +LI+ L K G+  +A  ++++
Sbjct: 467 TLINFLCKKGLVEQAIELLKQ 487



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 145/339 (42%), Gaps = 75/339 (22%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YN +++G CR  ++A    L   V      +P+  TY  ++   C  G++  A  + ++M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP----VAPNAYTYFPLVRALCARGRIADALAVLDDM 137

Query: 359 NSCGIKPSAVTFNVLID------GF-GKVG-----------------NMV---------- 384
              G  P+   ++V ++      GF G VG                 N+V          
Sbjct: 138 ARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPV 197

Query: 385 --SAEYMRERMLSFGYLPDV-----------------------------------VTFSS 407
             +   +R+ + SFG  PDV                                   VTFS+
Sbjct: 198 DEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFST 257

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI   CRNG   +  ++  +M     +P+V  +  +I+ +CKE RL  AR  L ++    
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P    YN ++ G C A   +EA  ++AEM +K C  D VTF IL+   C  G +   I
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVI 377

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +  +ML  GC PD IT  ++I+   K G+ +EA  +++
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLR 416



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 7/245 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+   C+ GL D   ++   M + G  PN+      +     A +   A+ L+SQ 
Sbjct: 394 TYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQM 453

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   +N+L+N L K+   ++A+ + K+       PD  +++ +I GL + G  
Sbjct: 454 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNT 513

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTL---ISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +A E    M   G SP+ + Y+++   +SG  R+N+V +  E +++   +S    D V 
Sbjct: 514 DEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRS----DAVL 569

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +VIS  CK G+ D+A      M S G  P+  T+ +LI G    G +  A+ +   + 
Sbjct: 570 YNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELC 629

Query: 395 SFGYL 399
           S G L
Sbjct: 630 SKGAL 634



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 83/182 (45%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ GL +    +   M  +G  P+       +    +AG  D A  LL+  
Sbjct: 464 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVM 523

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +T +Y+S+ +AL  +   ++ + MF+       + D   +N +I  L + GE 
Sbjct: 524 VKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGET 583

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A EF   M S GC P+  TY  LI GL     V    E+L E+  K      ++ +  
Sbjct: 584 DRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRKHLMKHFG 643

Query: 338 VI 339
           ++
Sbjct: 644 IV 645


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 214/417 (51%), Gaps = 9/417 (2%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +TYN+V+  LC+  L      V   MR DG    P+       ++   + G+ D A  +L
Sbjct: 10  RTYNVVVNGLCKARLTSKAYEVLKEMR-DGKSVAPDLVTYSTVINGFCKQGEMDRACEIL 68

Query: 215 SQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            +   R G +      Y S+++ L +    D A  M +E      +PD +TF+ LI G  
Sbjct: 69  REMVTRDG-MAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--FSP 330
              +V +A + + ++ +  C  D V+ + LI+GLCR   +   +EL +E++ + +  + P
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKP 187

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DVVTYT++I G+CK G ++KA  +   M      P+ VT++ L+ G  K G++  A  + 
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            RM S G +P+VVT+++LI G C   +++    L DEM       +  ++  L++  C+ 
Sbjct: 248 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVT 509
            R+ +A++  K++     +P    Y  ++ GFC A  ++EA  ++  M+      PD VT
Sbjct: 308 GRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 367

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           ++I++ G+    R VEA     +M+    AP+ +T +SLI  L K G  N A  +++
Sbjct: 368 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK 424



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 227/467 (48%), Gaps = 49/467 (10%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRSDGHLPNSPMIEFFVS 199
           + L+  R   S+     TY+ V+   C+ G  D + +++ + +  DG  P+       V 
Sbjct: 30  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVD 89

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
              R GK D A  ++ + +   V    F +++L+         DEA+ ++KE      + 
Sbjct: 90  GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRL 149

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDM-----GSFGCSPDIVTYNTLISGLCRVNEVAR 314
           D  + + LI GL R   + +A+E F +M     G++   PD+VTY  LI G C+   + +
Sbjct: 150 DAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW--KPDVVTYTALIDGFCKSGNLEK 207

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             ++L  ++ + +  P+VVTY+S++ G CK G +D+A  ++  M S G  P+ VT+  LI
Sbjct: 208 AMKMLGVMEGR-KCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI 266

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G      + +A  + + M +     D V++++L+DGYCR G++ +  +L  EM  K+  
Sbjct: 267 HGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCL 326

Query: 435 PNVYTFTILINALCKENRLNDAR------------------------------------R 458
           P+  T+T L+   C  +RL +AR                                     
Sbjct: 327 PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAE 386

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           F++++   ++ P    Y+ +IDG CKAG V+ A  ++  ++    KPD VT+TI+I G C
Sbjct: 387 FIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLC 442

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              R  EA+++  +M+     P   T NS+I  L + G  +EA++++
Sbjct: 443 GTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 489



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 173/318 (54%), Gaps = 4/318 (1%)

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNE 311
            R +  P+  T+N+++ GL +     KA+E   +M      +PD+VTY+T+I+G C+  E
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           + R  E+L+E+  +   +PDVVTYTSV+ G C+ GKMD+A  +  EM   G++P   TF+
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            LI G+     +  A  + + +L+     D V+ S+LI G CR  ++ +  +L  EM+ +
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 432 N---LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                 P+V T+T LI+  CK   L  A + L  ++    VP    Y+ ++ G CKAG++
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           D+A  +   M  K C P+ VT+T LI G C   ++  A  + ++M    C  D ++ N+L
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 549 ISCLLKGGMPNEAFRIMQ 566
           +    + G   EA ++ +
Sbjct: 301 LDGYCRLGRIEEAKQLFK 318



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 207/445 (46%), Gaps = 15/445 (3%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           ++G  +  F  + +  + ++K    TY  ++   C+ G  +    +   M     +PN  
Sbjct: 166 RIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVV 225

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +    +AG  D A  L  +        +   Y +L++ L   +  D A  +  E 
Sbjct: 226 TYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 285

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
                  DT ++N L+ G  R+G +++A + F +M +  C PD +TY  L+ G C  + +
Sbjct: 286 TATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRL 345

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                LL+ +K  +   PDVVTY+ V++GY +  +  +A     EM +  + P+AVT++ 
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 405

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LIDG  K G +  A      +L     PDVVT++ +I+G C   +  + L L +EM  K 
Sbjct: 406 LIDGLCKAGRVNHA----MEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR 461

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           + P+V TF  +I ALC+   +++A + L  +  + L P    Y  +++GF + G ++ A 
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 521

Query: 493 VIVAEMEEKRCKPDKV-------TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
            +   M  K  K            F+ LI G C    + +A+++  ++    C P +   
Sbjct: 522 ELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDC 581

Query: 546 NSLISCLLKGGMPNEAFRIMQRASE 570
            +++  LL+ G   EA +++   S+
Sbjct: 582 LAIVDGLLRAGRTEEAGKLINSISK 606



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 186/389 (47%), Gaps = 15/389 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+ G  D    +F  M S G +PN       +     A K DAA+ L+ + 
Sbjct: 226 TYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 285

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T  YN+LL+   +    +EA  +FKE       PD  T+  L++G      +
Sbjct: 286 TATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRL 345

Query: 278 KKAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++A     +M +  G  PD+VTY+ +++G  R        E ++E+  ++  +P+ VTY+
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN-VAPNAVTYS 404

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I G CK G+++ A  +   ++    KP  VT+ ++I+G         A  + E M++ 
Sbjct: 405 SLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P V TF+S+I   CR G +++  KL   M    L P + T+T L+    +  R+  A
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520

Query: 457 --------RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
                   R+  K     +LVP+   ++ +I G CKA  +D+A  +V E+  + C+P + 
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 579

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIG 537
               ++ G    GR  EA  + N + ++G
Sbjct: 580 DCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 135/246 (54%), Gaps = 5/246 (2%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
           +P+  TY  V++G CK     KA  +  EM +   + P  VT++ +I+GF K G M  A 
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           E +RE +   G  PDVVT++S++DG CR+G++++  ++  EMK K + P+ +TF+ LI  
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR---C 503
            C   ++++A +  K++  +         + +I G C+   + EA  +  EME +     
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           KPD VT+T LI G C  G + +A+ +   M    C P+ +T +SL+  L K G  ++A  
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245

Query: 564 IMQRAS 569
           + +R +
Sbjct: 246 LFRRMT 251


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 207/412 (50%), Gaps = 4/412 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++   C+          F+ MR +   PN       V+   +A     A  +L + 
Sbjct: 9   TWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEM 67

Query: 218 RPGE-VTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIG 275
           R G+ V      Y++++N   KQ   D A  + +E   R    PD  T+  ++ GL R G
Sbjct: 68  RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDG 127

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++ +A E   +M   G  PD  T++ LI+G C   +V    +L KE+   S + PDVVTY
Sbjct: 128 KMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTY 187

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+CK G ++KA  +   M      P+ VT++ L+ G  K G++  A  +  RM S
Sbjct: 188 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G +P+VVT+++LI G C   +++    L DEM      P+  ++  L++  C+  R+ +
Sbjct: 248 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEE 307

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTILI 514
           A++  K++     +P    Y  ++ GFC A  ++EA  ++  M+      PD VT++I++
Sbjct: 308 AKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVV 367

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G+    R VEA     +M+    AP+ +T +SLI  L K G  + A  +++
Sbjct: 368 AGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 218/432 (50%), Gaps = 7/432 (1%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRSDGHLPNSPMIEFFVS 199
           + L+  R   S+     TY+ V+   C+ G  D + +++ + +  DG  P+       V 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-Q 258
              R GK D A  ++ + +   V    F +++L+         DEA+ ++KE     S +
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  T+  LI G  + G ++KA +    M    C P++VTY++L+ GLC+  ++ +  +L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            + +  K    P+VVTYT++I G C   K+D A  + +EM +    P  V++N L+DG+ 
Sbjct: 242 FRRMTSKG-CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK-GKNLSPNV 437
           ++G +  A+ + + M +   LPD +T++ L+ G+C   +L +   L + MK    + P+V
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T++I++    +  R  +A  F++++   ++ P    Y+ +IDG CKAG VD A  ++  
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG- 556
           M  KR +P   TF  +I   C  G M EA  +   M   G  P  +T  +L+    + G 
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480

Query: 557 --MPNEAFRIMQ 566
             +  E F +M+
Sbjct: 481 MEIAYELFEVMR 492



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 210/462 (45%), Gaps = 55/462 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
           TY  V+  LC  G  D    +   M+  G  P+       ++    A K D A  L    
Sbjct: 115 TYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 174

Query: 215 ---SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
              S ++P  VT     Y +L++   K  N ++A+ M          P+  T++ L+ GL
Sbjct: 175 LTSSSWKPDVVT-----YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 229

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G++ +A + F  M S GC P++VTY TLI GLC  ++V     L+ E+       PD
Sbjct: 230 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC-CPPD 288

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            V+Y +++ GYC+LG++++A  ++ EM +    P  +T+  L+ GF     +  A ++ E
Sbjct: 289 TVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLE 348

Query: 392 RM-LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            M  + G  PDVVT+S ++ GY R  +  +  +   EM  +N++PN  T++ LI+ LCK 
Sbjct: 349 NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 408

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R++ A   LK +    + P    +N VI   C+ G++DEA  ++  M     +P  VT+
Sbjct: 409 GRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTY 468

Query: 511 TIL------------------------------------------IIGHCMKGRMVEAIS 528
           T L                                          I G C    + +A++
Sbjct: 469 TTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMA 528

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  ++    C P +    +++  LL+ G   EA +++   S+
Sbjct: 529 VVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 570



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 183/388 (47%), Gaps = 9/388 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G  +    +   M     +PN       +    +AG  D A  L  + 
Sbjct: 186 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 245

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y +L++ L   +  D A  +  E       PDT ++N L+ G  R+G +
Sbjct: 246 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRI 305

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F +M +  C PD +TY  L+ G C  + +     LL+ +K  +   PDVVTY+ 
Sbjct: 306 EEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 365

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V++GY +  +  +A     EM +  + P+AVT++ LIDG  K G +  A  + + M++  
Sbjct: 366 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR 425

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF+S+I   CR G +++  KL   M    L P + T+T L+    +  R+  A 
Sbjct: 426 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 485

Query: 458 RFLKQLK--------WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              + ++          +LVP+   ++ +I G CKA  +D+A  +V E+  + C+P +  
Sbjct: 486 ELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 544

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIG 537
              ++ G    GR  EA  + N + ++G
Sbjct: 545 CLAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 161/335 (48%), Gaps = 75/335 (22%)

Query: 292 CSPDIVTYNTLISGLCRVNEV----------------------------------ARGHE 317
           C P +VT+  +I G C+ N++                                  ++ +E
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDG 376
           +LKE++     +PD+VTY++VI+G+CK G+MD+A  I  EM    GI P  VT+  ++DG
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 377 FGKVGNMVSA-EYMRERML-----------------------------------SFGYLP 400
             + G M  A E +RE  L                                   S  + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           DVVT+++LIDG+C++G L + +K+   M+G+   PNV T++ L++ LCK   L+ A    
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           +++     VP    Y  +I G C A  VD A +++ EM    C PD V++  L+ G+C  
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           GR+ EA  +F +M    C PD IT     +CL++G
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRIT----YTCLVRG 333



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 144/276 (52%), Gaps = 37/276 (13%)

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEM---------------------------- 358
           E  P VVT+T +I G+CK  ++ +A   + +M                            
Sbjct: 2   ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 359 -------NSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLID 410
                  +   + P  VT++ +I+GF K G M  A E +RE +   G  PDVVT++S++D
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ-LKWNDLV 469
           G CR+G++++  ++  EMK K + P+ +TF+ LI   C   ++++A +  K+ L  +   
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  +IDGFCK+GN+++A  ++  ME ++C P+ VT++ L+ G C  G + +A+ +
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           F +M   GC P+ +T  +LI  L      + A  +M
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 277



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 8/186 (4%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P VVT++ +IDG+C+  QL Q L   ++M+ + ++PN  T+ +++N LCK    + A   
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 460 LKQLK-WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTILIIGH 517
           LK+++    + P    Y+ VI+GFCK G +D A  I+ EM  +    PD VT+T ++ G 
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           C  G+M  A  +  +M   G  PD  T ++LI+        +EA ++ +     + L   
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYK-----EILTSS 178

Query: 578 SWKKAV 583
           SWK  V
Sbjct: 179 SWKPDV 184



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C+P  VT+TI+I G C   ++ +A++ F KM R   AP++ T N +++ L K  + ++A+
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 563 RIMQRASEDQNL 574
            +++   + +++
Sbjct: 62  EVLKEMRDGKSV 73


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 207/413 (50%), Gaps = 2/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC  G       +   M  +G  PN+ +    +++  + G+ + ++ +L + 
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 477

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +    F YNSL+    K    +EA     E      +P+  T+   I G S+ GE+
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A  +F +M S G  P++  Y  LI G C+   V     + + +        DV TY+ 
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI-LSRRVLQDVQTYSV 596

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  + GKM +A GI++E+   G+ P+A T+N LI G  K GN+  A  + E M   G
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT++ LIDG C+ G++ +   L D+++G+ L+PN  T+  +++  CK      A 
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 716

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L+++    + P  F+YN +++  CK    ++A  +  EM EK      V+F  LI G+
Sbjct: 717 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGY 775

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C  G++ EA  +  +M+     P+ +T  SLI    K GM  EA R+     E
Sbjct: 776 CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 828



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 204/406 (50%), Gaps = 2/406 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+    +  +     M      PN+     F+    +AG+ + A    ++  
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  +  +Y +L+    K+ N  EA  +F+         D  T+++LI GLSR G++ 
Sbjct: 549 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 608

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AF  F ++   G  P+  TYN+LISG C+   V +  +LL+E+  K   +PD+VTY  +
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG-INPDIVTYNIL 667

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G++++A  +++++   G+ P+ VT+  ++DG+ K  N  +A  + E ML  G 
Sbjct: 668 IDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 727

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD   ++ +++  C+  +  + L L  EM  K  +  V +F  LI   CK  +L +A  
Sbjct: 728 PPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANH 786

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L+++     +P    Y  +ID  CKAG + EA  +  EM+E+   P   T+T L+ G+ 
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             G M E  ++F +M+  G  PD +T   +I    + G   EA ++
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 222/459 (48%), Gaps = 34/459 (7%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           L+ S V+  L     TY++++   C        +++   M   G  P        +   +
Sbjct: 263 LKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFM 322

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           R G  + A  +  +     +  +  ++N+LLN + K    ++A+ + +E      +PD+ 
Sbjct: 323 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 382

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+++LI+G  R   + +AFE   +M     +P ++TY+ +I+GLCR   +   + +L+E+
Sbjct: 383 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 442

Query: 323 KF----------------------------------KSEFSPDVVTYTSVISGYCKLGKM 348
                                               +    PDV  Y S+I G+CK  +M
Sbjct: 443 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 502

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++A     EM    ++P+A T+   IDG+ K G M  A+     MLS G LP+V  +++L
Sbjct: 503 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 562

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G+C+ G + +   +   +  + +  +V T+++LI+ L +  ++++A     +L+   L
Sbjct: 563 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGL 622

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P  F YN +I G CK GNVD+A+ ++ EM  K   PD VT+ ILI G C  G +  A +
Sbjct: 623 LPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKN 682

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +F+ +   G  P+ +T  +++    K   P  AF++++ 
Sbjct: 683 LFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 721



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 194/412 (47%), Gaps = 1/412 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++  +C+ G  +    +   M   G  P+S      +    R      A  LL + +
Sbjct: 349 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 408

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++  +   Y+ ++N L +  N      + +E      +P+   +  L+   ++ G V+
Sbjct: 409 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 468

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           ++      M   G  PD+  YN+LI G C+   +      L E+  +    P+  TY + 
Sbjct: 469 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM-LERRLRPNAHTYGAF 527

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GY K G+M+ A   +NEM SCG+ P+   +  LI+G  K GN+  A  +   +LS   
Sbjct: 528 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 587

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           L DV T+S LI G  RNG++++   +  E++ K L PN +T+  LI+  CK+  ++ A +
Sbjct: 588 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 647

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L+++    + P    YN +IDG CKAG ++ A  +  ++E +   P+ VT+  ++ G+C
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                  A  +  +ML  G  PD    N +++   K     +A  + Q   E
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 759



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 176/353 (49%), Gaps = 16/353 (4%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ++ +++ L+++  K     EAV +F        +P   + N L+  L +  +V+  ++ F
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 212

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF---------------- 328
             M +    PD+ TY  +IS  C+V  V     +L E+  K+                  
Sbjct: 213 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGL 272

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD+ TY  +I+G+C   +  +A  +  EM   G+KP  +T+N LIDGF + G++  A  
Sbjct: 273 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 332

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +++ M++ G   +++ +++L++G C+ G++ + L++  EM  K + P+  T+++LI   C
Sbjct: 333 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 392

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +   +  A   L ++K   L P    Y+ +I+G C+ GN+   N I+ EM     KP+ V
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 452

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +T L+  H  +GR+ E+  I  +M   G  PD    NSLI    K     EA
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 505



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 181/363 (49%), Gaps = 26/363 (7%)

Query: 230 NSLLNALVKQNNADEAVY--MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           + L+  +++ +++  AV   + K Y      P++  F++L+    ++G + +A   F   
Sbjct: 121 SDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGP 180

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV---KFKSEFSPDVVTYTSVISGYCK 344
            +F   P +++ N+L+  L + N+V    EL  +V       +  PDV TYT++IS +CK
Sbjct: 181 KNFEFRPSLLSCNSLLGDLLKGNKV----ELFWKVFDGMCAHKVLPDVYTYTNMISAHCK 236

Query: 345 LGK-----------------MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           +G                  +D+A  +   M   G+ P   T+++LI+GF        A+
Sbjct: 237 VGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAK 296

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M   M+  G  P+ +T+++LIDG+ R G + Q  ++ DEM    +  N+  +  L+N +
Sbjct: 297 LMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGV 356

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  ++  A   ++++    + P    Y+ +I+G C+  N+  A  ++ EM++++  P  
Sbjct: 357 CKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 416

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +T++++I G C  G +    +I  +M+  G  P+ +   +L++   K G   E+  I++R
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476

Query: 568 ASE 570
             E
Sbjct: 477 MRE 479



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 164/347 (47%), Gaps = 8/347 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  D    + + M   G  P+       +    +AG+ + AK L    
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +   Y ++++   K  N   A  + +E       PD + +N+++    +  + 
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 747

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA + F +M   G +   V++NTLI G C+  ++   + LL+E+  + +F P+ VTYTS
Sbjct: 748 EKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEM-IEKQFIPNHVTYTS 805

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G M +A  ++ EM    + P+A T+  L+ G+  +GNM     + E M++ G
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL------SPNVYTFTILINALCKEN 451
             PD +T+  +ID YCR G + +  KL DE+  K +         + T +++        
Sbjct: 866 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAG 925

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +++A   L+ +     V        ++DG     N ++++ ++ +M
Sbjct: 926 NMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 193/360 (53%), Gaps = 3/360 (0%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           ++ +++N L+N   K+ N  +A  +F E  +   QP   +FN LI G  ++G + + F  
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
            + M      PD+ TY+ LI+ LC+ N++   H L  E+  K    P+ V +T++I G+ 
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM-CKRGLIPNDVIFTTLIHGHS 356

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           + G++D     Y +M S G++P  V +N L++GF K G++V+A  + + M+  G  PD +
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+++LIDG+CR G +   L++  EM    +  +   F+ L+  +CKE R+ DA R L+++
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    Y  ++D FCK G+      ++ EM+     P  VT+ +L+ G C  G+M
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
             A  + + ML IG  PDDIT N+L+    +    N + R +Q+        L S+K  V
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA--NSSKRYIQKPEIGIVADLASYKSIV 594



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 161/330 (48%), Gaps = 1/330 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +N++M   C+ G     Q VFD +      P        ++   + G  D    L  Q 
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                    F Y++L+NAL K+N  D A  +F E  +    P+   F  LI G SR GE+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               E +  M S G  PDIV YNTL++G C+  ++     ++  +  +    PD +TYT+
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKITYTT 420

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+ G ++ A  I  EM+  GI+   V F+ L+ G  K G ++ AE     ML  G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT++ ++D +C+ G    G KL  EM+     P+V T+ +L+N LCK  ++ +A 
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
             L  +    +VP    YN +++G  +  N
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 190/389 (48%), Gaps = 18/389 (4%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           +IE  VS   R GK  A+   +S        M  F+ ++L+          +A+    + 
Sbjct: 140 LIELVVS---RKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAI----QC 192

Query: 253 FRLYSQPDTWTFNILIQG-------LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           FRL  +     F++ I+G       + ++      + F+ ++   G   ++  +N L++ 
Sbjct: 193 FRLSRK---HRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNK 249

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
            C+   ++   ++  E+  K    P VV++ ++I+GYCK+G +D+   + ++M     +P
Sbjct: 250 FCKEGNISDAQKVFDEIT-KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRP 308

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
              T++ LI+   K   M  A  + + M   G +P+ V F++LI G+ RNG+++   +  
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            +M  K L P++  +  L+N  CK   L  AR  +  +    L P    Y  +IDGFC+ 
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G+V+ A  I  EM++   + D+V F+ L+ G C +GR+++A     +MLR G  PDD+T 
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQNL 574
             ++    K G     F++++    D ++
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 163/318 (51%), Gaps = 7/318 (2%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G    A+ +  +     +  +   +N+L+N   K  N DE   +  +  +  ++PD +
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T++ LI  L +  ++  A   F +M   G  P+ V + TLI G  R  E+    +L+KE 
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI----DLMKES 367

Query: 323 KFK---SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
             K       PD+V Y ++++G+CK G +  A  I + M   G++P  +T+  LIDGF +
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G++ +A  +R+ M   G   D V FS+L+ G C+ G++    +   EM    + P+  T
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T++++A CK+       + LK+++ +  VP    YN +++G CK G +  A++++  M 
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547

Query: 500 EKRCKPDKVTFTILIIGH 517
                PD +T+  L+ GH
Sbjct: 548 NIGVVPDDITYNTLLEGH 565


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 203/401 (50%), Gaps = 45/401 (11%)

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAK-GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           HL  +P +   + +   AG+       L S+ +   + + T   + LL++L        A
Sbjct: 45  HLAATPSLPHLLLTASVAGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPA----PA 100

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             +F + FRL     T TFNI+++ L   G+  +A E    M     SP+ VTYNT+I+G
Sbjct: 101 FVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQM----PSPNAVTYNTVIAG 156

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IK 364
            C    V  G E+++E++ +   +PD  TY +VISG+CK+GK++ AT +++EM + G ++
Sbjct: 157 FCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVE 216

Query: 365 PSAVTFNVLIDGFGKVGNM-----------------------------------VSAEYM 389
           P+AV +N LI G+   GN+                                     A  +
Sbjct: 217 PNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHAL 276

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E M   G  PD  T++ LI+GYC+ G+  + +K+ + M GK +   V T+T LI+AL  
Sbjct: 277 VEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSM 336

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +  + +  R         + P  FMYN +I+  C  G++D A  I+ EME+KR  PD VT
Sbjct: 337 KGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVT 396

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           +  L+ G C+ GR+ EA  +  +M + G  PD ++ N+LIS
Sbjct: 397 YNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLIS 437



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 196/413 (47%), Gaps = 9/413 (2%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F +  R+ L L  S  T+N+++R LC  G       +   M S    PN+      ++  
Sbjct: 104 FADIFRLRLPL--STTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGF 157

Query: 202 IRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQP 259
              G+  A   ++ + R  G +    + Y ++++   K    ++A  +F E       +P
Sbjct: 158 CARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEP 217

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +   +N LI G    G ++ A  +  +M   G S  + TYN  +  L      A  H L+
Sbjct: 218 NAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALV 277

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  K   +PD  TY  +I+GYCK GK  KA  ++  M   GI+ + VT+  LI     
Sbjct: 278 EEMGEKG-LAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSM 336

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + +    +  G  PD+  +++LI+ +C  G +++  ++  EM+ K ++P+  T
Sbjct: 337 KGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVT 396

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L+  LC   RL++AR  ++++    + P    YN +I G+   G++ +A  +  EM 
Sbjct: 397 YNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMM 456

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            K   P  +T+  +I G C+ G+  +A  +  +M+  G  PDD T  SLI  L
Sbjct: 457 GKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 174/374 (46%), Gaps = 40/374 (10%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           +ST  +N +L  L        A+    E  R    P+  T+N +I G    G V+   E 
Sbjct: 114 LSTTTFNIMLRHLCTAGKPVRAL----ELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEI 169

Query: 284 FYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
             +M    G +PD  TY T+ISG C+V +V    ++  E+  + +  P+ V Y ++I GY
Sbjct: 170 MREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGY 229

Query: 343 CKLGKMD-----------------------------------KATGIYNEMNSCGIKPSA 367
           C  G ++                                   +A  +  EM   G+ P A
Sbjct: 230 CDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDA 289

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T+N+LI+G+ K G    A  M E M+  G    VVT++SLI      G + +  +L ++
Sbjct: 290 FTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFND 349

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
              + + P+++ +  LIN+ C    ++ A   + +++   + P    YN ++ G C  G 
Sbjct: 350 AVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGR 409

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +DEA  ++ EM ++  +PD V++  LI G+ MKG + +A+ + ++M+  G  P  +T N+
Sbjct: 410 LDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNA 469

Query: 548 LISCLLKGGMPNEA 561
           +I  L   G   +A
Sbjct: 470 MIKGLCLNGQGGDA 483



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 178/391 (45%), Gaps = 55/391 (14%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNP------------------KLGLKFLEFSRVNLSLNHSF 156
           R+LC    P+ +LE+++++ +P                  + G++ +   R    +    
Sbjct: 124 RHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDK 183

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            TY  V+   C++G  +    VFD M ++G + PN+ M    +      G  + A     
Sbjct: 184 YTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRG 243

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     V+M+   YN  ++ L  +  A EA  + +E       PD +T+NILI G  + G
Sbjct: 244 EMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEG 303

Query: 276 EVKKAFEFFY-----------------------------------DMGSFGCSPDIVTYN 300
           + KKA + F                                    D    G  PD+  YN
Sbjct: 304 KEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYN 363

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI+  C   ++ R  E++ E++ K   +PD VTY +++ G C LG++D+A G+  EM  
Sbjct: 364 ALINSHCTGGDMDRAFEIMGEME-KKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTK 422

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            GI+P  V++N LI G+   G++  A  +R+ M+  G+ P ++T++++I G C NGQ   
Sbjct: 423 RGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGD 482

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
              L  EM G  ++P+  T+  LI  L  E+
Sbjct: 483 AEDLVKEMVGNGITPDDSTYISLIEGLTTED 513



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 145/288 (50%), Gaps = 7/288 (2%)

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           AF  F D+          T+N ++  LC   +  R  ELL+++      SP+ VTY +VI
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMP-----SPNAVTYNTVI 154

Query: 340 SGYCKLGKMDKATGIYNEMNS-CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +G+C  G++     I  EM    GI P   T+  +I G+ KVG +  A  + + ML+ G 
Sbjct: 155 AGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGK 214

Query: 399 L-PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P+ V +++LI GYC  G L   L+   EM  + +S  V T+ + ++ L  E R  +A 
Sbjct: 215 VEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAH 274

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++++    L P  F YN +I+G+CK G   +A  +   M  K  +   VT+T LI   
Sbjct: 275 ALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHAL 334

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            MKG + E   +FN  +R G  PD    N+LI+    GG  + AF IM
Sbjct: 335 SMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIM 382



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 64/153 (41%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ S C  G  D    +   M      P+       +      G+ D A+GL+ +  
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT 421

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +      YN+L++    + +  +AV +  E       P   T+N +I+GL   G+  
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGG 481

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
            A +   +M   G +PD  TY +LI GL   +E
Sbjct: 482 DAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 200/373 (53%), Gaps = 3/373 (0%)

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           ++  K   A G+L+         + + +N LL  L +     +AV + +E  R    PD 
Sbjct: 118 VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDV 177

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +++N +I+G     E++KA E   +M   GCS  +VT+  LI   C+  ++      LKE
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE 237

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +KF      D+V YTS+I G+C  G++D+   +++E+   G  P A+T+N LI GF K+G
Sbjct: 238 MKFMG-LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + E M+  G  P+V T++ LIDG C  G+  + L+L + M  K+  PN  T+ 
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--E 499
           I+IN LCK+  + DA   ++ +K     P    YN ++ G C  G++DEA+ ++  M  +
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
                PD +++  LI G C + R+ +A+ I++ ++    A D +T N L++  LK G  N
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476

Query: 560 EAFRIMQRASEDQ 572
           +A  + ++ S+ +
Sbjct: 477 KAMELWKQISDSK 489



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 203/447 (45%), Gaps = 38/447 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+R  CE    +    + + M+  G   +       + +  +AGK D A G L + 
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +     +Y SL+         D    +F E       P   T+N LI+G  ++G++
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E F  M   G  P++ TY  LI GLC V +     +LL  +  K E  P+ VTY  
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVTYNI 357

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--S 395
           +I+  CK G +  A  I   M     +P  +T+N+L+ G    G++  A  +   ML  S
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-----KGKNLSPNVY------------ 438
               PDV+++++LI G C+  +L+Q L + D +      G  ++ N+             
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477

Query: 439 ------------------TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
                             T+T +I+  CK   LN A+  L +++ ++L P  F YN ++ 
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             CK G++D+A  +  EM+     PD V+F I+I G    G +  A S+   M R G +P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           D  T + LI+  LK G  +EA     +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDK 624



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 201/419 (47%), Gaps = 1/419 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           + L      Y  ++R  C+ G  D  + +FD +   G  P +      +    + G+   
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +        V  + + Y  L++ L       EA+ +         +P+  T+NI+I 
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L + G V  A E    M      PD +TYN L+ GLC   ++    +LL  +   S ++
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420

Query: 330 -PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV++Y ++I G CK  ++ +A  IY+ +         VT N+L++   K G++  A  
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + +++     + +  T++++IDG+C+ G LN    L  +M+   L P+V+ +  L+++LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           KE  L+ A R  ++++ ++  P    +N +IDG  KAG++  A  ++  M      PD  
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T++ LI      G + EAIS F+KM+  G  PD    +S++   +  G  ++   ++++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 179/356 (50%), Gaps = 9/356 (2%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL----SRIGEVKKAF 281
            F  N+L+  LV+  N + A      ++R   + DT+   + + GL     ++ +   AF
Sbjct: 72  AFAGNNLMAKLVRSRNHELAF----SFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAF 127

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                M   G + ++  +N L+ GLCR  E  +   LL+E++ ++   PDV +Y +VI G
Sbjct: 128 GVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR-RNSLMPDVFSYNTVIRG 186

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +C+  +++KA  + NEM   G   S VT+ +LID F K G M  A    + M   G   D
Sbjct: 187 FCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD 246

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           +V ++SLI G+C  G+L++G  L DE+  +  SP   T+  LI   CK  +L +A    +
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +    + P  + Y  +IDG C  G   EA  ++  M EK  +P+ VT+ I+I   C  G
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
            + +A+ I   M +    PD+IT N L+  L   G  +EA +++    +D +   P
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 178/394 (45%), Gaps = 39/394 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++R  C++G       +F++M   G  PN       +      GK   A  LL+  
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   YN ++N L K     +AV + +   +  ++PD  T+NIL+ GL   G++
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 278 KKAFEFFYDM--GSFGCSPDIVTYNTLISGLCRVN------------------------- 310
            +A +  Y M   S    PD+++YN LI GLC+ N                         
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 311 ----------EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
                     +V +  EL K++   S+   +  TYT++I G+CK G ++ A G+  +M  
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQIS-DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             ++PS   +N L+    K G++  A  + E M      PDVV+F+ +IDG  + G +  
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              L   M    LSP+++T++ LIN   K   L++A  F  ++  +   P   + + V+ 
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDK-VTFTIL 513
                G  D+   +V ++ +K    DK +T T++
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 164/352 (46%), Gaps = 14/352 (3%)

Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL-- 214
           TYN+++  LC+ GL  D+V++V + M+     P++      +      G  D A  LL  
Sbjct: 354 TYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 215 ----SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
               S +   +V      YN+L++ L K+N   +A+ ++          D  T NIL+  
Sbjct: 413 MLKDSSYTDPDV----ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             + G+V KA E +  +       +  TY  +I G C+   +     LL +++  SE  P
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQP 527

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            V  Y  ++S  CK G +D+A  ++ EM      P  V+FN++IDG  K G++ SAE + 
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             M   G  PD+ T+S LI+ + + G L++ +   D+M      P+ +    ++     +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC-KAGNVDEANVIVAEMEEK 501
              +     +K+L   D+V    +   V+D  C  + N+D A  ++   ++K
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 213/396 (53%), Gaps = 8/396 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           ++ +V++  CE G    ++  FD +   R  G  PN  +    +  C + G+ + AK L 
Sbjct: 165 SFGIVIKGCCEAG---EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  + + Y  L++ L K     +   M+++       P+ +T+N ++  L + 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  K AF+ F +M   G S +IVTYNTLI GLCR  +    ++++ ++K     +P+++T
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK-SYVINPNLIT 340

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+C +GK+ KA  +  ++ S G+ PS VT+NVL+ GF + G+   A  M + M 
Sbjct: 341 YNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEME 400

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P  VT++ LID + R+  +   ++L   M+   L P+V+T+++LI+  C + ++N
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMN 460

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A R  K +    L P   +YN +I G+CK G+   A  +  +MEEK   P+  +++ LI
Sbjct: 461 EASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLI 520

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              C + ++ EA  +  KM+  G  P D T+ +LIS
Sbjct: 521 RVLCKERKLKEAEDLVEKMIDSGIDPSD-TICNLIS 555



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 205/397 (51%), Gaps = 2/397 (0%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +  C  AG+ + +  LL + R    + +  +Y +L++   K+   ++A  +F E  +   
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
             + WT+ +LI GL + G  K+ FE +  M   G  P++ TYN +++ LC+        +
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFK 289

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +  E++ +   S ++VTY ++I G C+  K ++A  + ++M S  I P+ +T+N LIDGF
Sbjct: 290 VFDEMRERG-VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGF 348

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             VG +  A  +   + S G  P +VT++ L+ G+CR G  +   K+  EM+ + + P+ 
Sbjct: 349 CSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+TILI+   + + +  A +    ++   LVP    Y+ +I GFC  G ++EA+ +   
Sbjct: 409 VTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M EK  +P++V +  +I+G+C +G    A+ +F  M     AP+  + + LI  L K   
Sbjct: 469 MVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528

Query: 558 PNEAFRIMQRASEDQNLQLPSWKKAVPLRTNTDIPVA 594
             EA  ++++   D  +        +  R  TD PVA
Sbjct: 529 LKEAEDLVEKMI-DSGIDPSDTICNLISRAKTDSPVA 564



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 197/378 (52%), Gaps = 35/378 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+LL  +V  ++ ++    F E  ++    D ++F I+I+G    GE++K+F+   ++ 
Sbjct: 132 FNNLLTFVVGSSSFNQWWCFFNES-KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELR 190

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KF----------------------K 325
            FG SP++V Y TLI G C+  E+ +  +L  E+ KF                      K
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250

Query: 326 SEFS-----------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             F            P++ TY  V++  CK G+   A  +++EM   G+  + VT+N LI
Sbjct: 251 QGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G  +      A  + ++M S+   P+++T+++LIDG+C  G+L + L LC ++K + LS
Sbjct: 311 GGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLS 370

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T+ +L++  C++   + A + +K+++   + P    Y  +ID F ++ N++ A  +
Sbjct: 371 PSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL 430

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + MEE    PD  T+++LI G C+KG+M EA  +F  M+     P+++  N++I    K
Sbjct: 431 RSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCK 490

Query: 555 GGMPNEAFRIMQRASEDQ 572
            G    A R+ +   E +
Sbjct: 491 EGSSYRALRLFRDMEEKE 508



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 1/207 (0%)

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           K  +  + V+I+ + +  ++ S+ Y    M+  G++P    F++L+     +   NQ   
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
             +E K K +  +VY+F I+I   C+   +  +   L +L+     P   +Y  +IDG C
Sbjct: 151 FFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G +++A  +  EM +     ++ T+T+LI G    G   +   ++ KM   G  P+  
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASE 570
           T N +++ L K G   +AF++     E
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRE 296



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 36/222 (16%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L+ S  TYN+++   C                                   R G    A 
Sbjct: 369 LSPSLVTYNVLVSGFC-----------------------------------RKGDTSGAA 393

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            ++ +     +  S   Y  L++   + +N + A+ +      L   PD  T+++LI G 
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGF 453

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              G++ +A   F  M      P+ V YNT+I G C+     R   L ++++ K E +P+
Sbjct: 454 CIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK-ELAPN 512

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
           V +Y+ +I   CK  K+ +A  +  +M   GI PS    N++
Sbjct: 513 VASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 205/406 (50%), Gaps = 1/406 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+M   D    V D MRS    P++      + S    GK D A  +L+Q  
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   Y  L+ A + +   DEA+ +  E      +PD +T+N +I+G+ + G V 
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AFE   ++   GC PD+++YN L+  L    +   G +L+ ++ F  +  P+VVTY+ +
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM-FSEKCDPNVVTYSIL 339

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+  C+ GK+++A  +   M   G+ P A +++ LI  F + G +  A    E M+S G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LPD+V +++++   C+NG+ +Q L++  ++     SPN  ++  + +AL        A  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            + ++  N + P    YN +I   C+ G VDEA  ++ +M      P  VT+ I+++G C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              R+ +AI++   M+  GC P++ T   LI  +   G   EA  +
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 173/339 (51%), Gaps = 1/339 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F YN+L+N   K N  D+A  +          PDT T+NI+I  L   G++  A +    
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + S  C P ++TY  LI        V    +L+ E+       PD+ TY ++I G CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNTIIRGMCKEG 277

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +D+A  +   +   G +P  +++N+L+      G     E +  +M S    P+VVT+S
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LI   CR+G++ + + L   MK K L+P+ Y++  LI A C+E RL+ A  FL+ +  +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             +P    YN V+   CK G  D+A  I  ++ E  C P+  ++  +       G  + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + +  +M+  G  PD+IT NS+ISCL + GM +EAF ++
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 43/336 (12%)

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---LCRVNEVARGHELLKEVKFKSEFS 329
           R G   ++      M   G +PD++    LI G   L  + +  R  E+L+  KF     
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE--KFGQ--- 155

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV  Y ++I+G+CK+ ++D AT + + M S    P  VT+N++I      G +  A  +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++LS    P V+T++ LI+     G +++ LKL DEM  + L P+++T+  +I  +CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 450 ENRLNDA-----------------------RRFLKQLKWND---LVPKPF---------M 474
           E  ++ A                       R  L Q KW +   L+ K F          
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +I   C+ G ++EA  ++  M+EK   PD  ++  LI   C +GR+  AI     M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             GC PD +  N++++ L K G  ++A  I  +  E
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 1/225 (0%)

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C+ G   ++  +   M   G  P  +    LI GF  + N+  A  + E +  FG  PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
             +++LI+G+C+  +++   ++ D M+ K+ SP+  T+ I+I +LC   +L+ A + L Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           L  ++  P    Y  +I+     G VDEA  ++ EM  +  KPD  T+  +I G C +G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  A  +   +   GC PD I+ N L+  LL  G   E  ++M +
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 201/365 (55%), Gaps = 1/365 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G+  AA  LL +     V     MYN++++ + K  + ++A  ++ E       PD +
Sbjct: 310 KVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVF 369

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+N LI G   +G++K A + F  M S    PD+ T++ L+ G C+   +     +L  +
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL-AM 428

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K    PDVVTY+S++ GYC + +++KA  I+N M+  G+  +  ++N++I+GF K+  
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  + + M      PDV+T+SSLIDG C++G+++  L+L DEM  +   P++ T+  
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +++ALCK++ ++ A   L +LK   + P    Y  ++ G C++G +++A  +  ++  K 
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              D   +T++I G C KG   EA+++ +KM   GC PD  T   +I  L +    + A 
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668

Query: 563 RIMQR 567
           ++++ 
Sbjct: 669 KLLRE 673



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 188/356 (52%), Gaps = 6/356 (1%)

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K L + + P  +T++TF+    L   + Q     A++   +   +    D  ++  LI G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQ-----ALHFHDKVIAMGFHLDQVSYGTLING 307

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L ++GE K A E           PD+V YNT+I G+C+   V    +L  E K      P
Sbjct: 308 LCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSE-KVSKRIFP 366

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DV TY ++ISG+C +GK+  A  ++N+M S  I P   TF++L+DGF K GN+  A+ + 
Sbjct: 367 DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL 426

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             M+     PDVVT+SSL+DGYC   ++N+   + + M  + ++ NV ++ I+IN  CK 
Sbjct: 427 AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI 486

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             +++A +  K++    + P    Y+ +IDG CK+G +  A  +V EM  +  +PD +T+
Sbjct: 487 KMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITY 546

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             ++   C K  + +AI++  K+   G  PD  T   L+  L + G   +A ++ +
Sbjct: 547 NSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFE 602



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 165/310 (53%), Gaps = 1/310 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PDT T    I+G    G++ +A  F   + + G   D V+Y TLI+GLC+V E     E
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           LL+    K    PDVV Y ++I G CK   ++ A  +Y+E  S  I P   T+N LI GF
Sbjct: 320 LLRRNDGKL-VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             VG +  A  +  +M S   +PDV TFS L+DG+C++G + +   +   M  +++ P+V
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T++ L++  C  N +N A      +    +      YN +I+GFCK   VDEA  +  E
Sbjct: 439 VTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K+  PD +T++ LI G C  GR+  A+ + ++M   G  PD IT NS++  L K   
Sbjct: 499 MHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHH 558

Query: 558 PNEAFRIMQR 567
            ++A  ++ +
Sbjct: 559 VDKAITLLTK 568



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 142/274 (51%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           + T I   C +       E       K+ + PD +T T+ I G+C  G++ +A   ++++
Sbjct: 230 HKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKV 289

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
            + G     V++  LI+G  KVG   +A  +  R       PDVV ++++IDG C++  +
Sbjct: 290 IAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHV 349

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           N    L  E   K + P+V+T+  LI+  C   +L DA     ++   +++P  + ++ +
Sbjct: 350 NDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSIL 409

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           +DGFCK GN+ EA  ++A M ++  KPD VT++ L+ G+C+   + +A SIFN M   G 
Sbjct: 410 VDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV 469

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
             +  + N +I+   K  M +EA ++ +     Q
Sbjct: 470 TANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 164/340 (48%), Gaps = 1/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  +C+    +    ++    S    P+       +S     GK   A  L ++  
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMT 395

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    + ++ L++   K  N  EA  +     +   +PD  T++ L+ G   + EV 
Sbjct: 396 SKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVN 455

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA   F  M   G + ++ +YN +I+G C++  V    +L KE+  K  F PDV+TY+S+
Sbjct: 456 KAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIF-PDVITYSSL 514

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G++  A  + +EM+  G +P  +T+N ++D   K  ++  A  +  ++   G 
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD+ T++ L+ G C++G+L    K+ +++  K  + +VY +T++I   C +   ++A  
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 634

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            L +++ N  +P    Y  +I    +    D A  ++ EM
Sbjct: 635 LLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 38/225 (16%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++YN+++   C++ + D    +F  M      P+       +    ++G+   A  L+ +
Sbjct: 474 QSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDE 533

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                       YNS+L+AL K+++ D+A+ +  +      +PD  T+ IL++GL + G+
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593

Query: 277 VKKAFEFFYDM----------------------GSF-------------GCSPDIVTYNT 301
           ++ A + F D+                      G F             GC PD  TY  
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653

Query: 302 LISGLCRVNEVARGHELLKEVKFKS---EFSPDVVTYTSVISGYC 343
           +I  L   +E     +LL+E+  +      + D+V    V   +C
Sbjct: 654 IILSLFEKDENDMAEKLLREMIMRGLLVALTDDLVASILVRRTWC 698


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 203/403 (50%), Gaps = 12/403 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++  LC+ G H     +F  M+  G  PN       +     +G+  AA+ LL +  
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +++ +   YN+L+NA VK+    EA  ++ E       P+T T+N +I G  +   + 
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A + FY M + GCSPD+ T+ TLI G C    +  G ELL E+  +     + VTY ++
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP-RRGLVANTVTYNTL 434

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF-- 396
           I G+C +G ++ A  +  +M S G+ P  VT N L+DG    G +  A  M + M     
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 397 ---------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                    G  PDV+T++ LI G    G+  +  +L +EM  + + P+  T++ +I+ L
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK++RL++A +    +      P    +N +I+G+CKAG VD+   +  EM  +    D 
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           + +  LI G    G +  A+ IF +M+  G  PD IT+ ++++
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 184/352 (52%), Gaps = 7/352 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           + +LL+ L   +   EA+ +F +  R    PD  TF  L+ GL R G V +A      M 
Sbjct: 154 FTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMV 209

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD +TY T + G+C++ +      LL++++  S   P+VV Y+++I G CK G+ 
Sbjct: 210 ENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRH 269

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             +  ++ EM   GI P+ VT+N +I GF   G   +A+ + + ML     P+VVT+++L
Sbjct: 270 SDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNAL 329

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ + + G+  +  +L DEM  + + PN  T+  +I+  CK++RL+ A      +     
Sbjct: 330 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 389

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  F +  +IDG+C A  +D+   ++ EM  +    + VT+  LI G C+ G +  A+ 
Sbjct: 390 SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 449

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           +  +M+  G  PD +T N+L+  L   G   +A   F+ MQ++  D +   P
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 201/422 (47%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY   +  +C+MG   S   +   M    H+ PN  +    +    + G+   +  L  +
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +  +   YN ++           A  + +E       P+  T+N LI    + G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TYN++I G C+ + +    ++   +  K   SPDV T+T
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG-CSPDVFTFT 397

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D    + +EM   G+  + VT+N LI GF  VG++ +A  + ++M+S 
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS-----------PNVYTFTILIN 445
           G  PD+VT ++L+DG C NG+L   L++   M+   +            P+V T+ ILI 
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +IDG CK   +DEA  +   M  K   P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTF  LI G+C  GR+ + + +F +M R G   D I   +LI    K G  N A  I 
Sbjct: 578 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 637

Query: 566 QR 567
           Q 
Sbjct: 638 QE 639



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 207/429 (48%), Gaps = 13/429 (3%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCE--MGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVS 199
           E SR   S    F+  +L +RS      GL D++ +  D +RS    P   +I+F   + 
Sbjct: 33  EKSRDGESGEAGFRGESLKLRSGSYEIKGLEDAIDLFSDMLRSR---PLPSVIDFNKLMG 89

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           + +R  + D    L  +    ++    + +  L+      +    A+  F +  +L   P
Sbjct: 90  AVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 149

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  TF  L+ GL     V +A + F+ +    C PD++T+ TL++GLCR   V     LL
Sbjct: 150 DVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALL 205

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFG 378
             +  ++   PD +TY + + G CK+G    A  +  +M     IKP+ V ++ +IDG  
Sbjct: 206 DRM-VENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLC 264

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G    +  +   M   G  P++VT++ +I G+C +G+ +   +L  EM  + +SPNV 
Sbjct: 265 KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  LINA  KE +  +A     ++    ++P    YN +IDGFCK   +D A  +   M
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K C PD  TFT LI G+C   R+ + + + ++M R G   + +T N+LI      G  
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444

Query: 559 NEAFRIMQR 567
           N A  + Q+
Sbjct: 445 NAALDLSQQ 453



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 5/248 (2%)

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +S   P V+ +  ++    ++ + D    +Y +M    I+    +F +LI  F     +
Sbjct: 73  LRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKL 132

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A     ++   G  PDVVTF++L+ G C + ++++ L L  ++      P+V TFT L
Sbjct: 133 PFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTL 188

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KR 502
           +N LC+E R+ +A   L ++  N L P    Y   +DG CK G+   A  ++ +MEE   
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            KP+ V ++ +I G C  GR  ++ ++F +M   G  P+ +T N +I      G  + A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 563 RIMQRASE 570
           R++Q   E
Sbjct: 309 RLLQEMLE 316



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 4/183 (2%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML    LP V+ F+ L+    R  + +  + L  +M+ K +  ++Y+FTILI   C  ++
Sbjct: 72  MLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 131

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L  A     +L    L P    +  ++ G C    V EA     ++  + C+PD +TFT 
Sbjct: 132 LPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEA----LDLFHQICRPDVLTFTT 187

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           L+ G C +GR+VEA+++ ++M+  G  PD IT  + +  + K G    A  ++++  E  
Sbjct: 188 LMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEIS 247

Query: 573 NLQ 575
           +++
Sbjct: 248 HIK 250


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 181/339 (53%), Gaps = 6/339 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN LL  L +    DE   ++ E    +   D +TFN++I    ++G VK+A +F   M 
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G SPD  T  + I G CR  +V     + +E+  ++E     V+Y  +I G C+ G++
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNE-----VSYNQLIHGLCEAGRI 274

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  ++  M      P+  T+  LI G  +  N+  A  + + ML    +PD++T++SL
Sbjct: 275 DEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSL 333

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G CR G L+   +L   MK + L P+  T+   I+ LCK NR+ +ARR    L    +
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV 393

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                MY+ +IDG+CK G VDEA  +  +M  K C P+  TF  LI G C  G + EA+S
Sbjct: 394 SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALS 453

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +F++M+++G  P   T N LI  +LK G  ++A + +Q+
Sbjct: 454 LFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQK 492



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 195/398 (48%), Gaps = 10/398 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+NL++   C+MG     +     M   G  P+     +F S+    G C  +K + S F
Sbjct: 194 TFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPD-----YFTSTSFILGYC-RSKDVDSAF 247

Query: 218 RPGEV--TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           R  E     +   YN L++ L +    DEAV +F         P+ +T+  LI+GL R  
Sbjct: 248 RVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-K 306

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V KA     +M      PD++TYN+LI+G CR   +   + LL  +K +    PD  TY
Sbjct: 307 NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERG-LVPDQRTY 365

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
              I   CK  ++++A  +++ +   G+  + + ++VLIDG+ KVG +  A  + E+MLS
Sbjct: 366 GCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLS 425

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               P+  TF++LI G C  G L + L L D+M    L P VYTF ILI  + K+   +D
Sbjct: 426 KNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDD 485

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A + L+++  +   P    YN  I+ +C AG V EA  ++ +M+E+   PD  T+T LI 
Sbjct: 486 AHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIK 545

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
            +   G    A  +   M    C P   T  SLI  L 
Sbjct: 546 AYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLF 583



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 192/412 (46%), Gaps = 6/412 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S K YN ++  L   GL D +  ++  M  +    +       ++   + G    AK  +
Sbjct: 156 SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     ++   F   S +    +  + D A  +F+E        +  ++N LI GL   
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM----PNRNEVSYNQLIHGLCEA 271

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +A   F  M    C P++ TY  LI GLCR N V +   LL E+  +    PD++T
Sbjct: 272 GRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEM-LERNLVPDLIT 329

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y S+I+G C+ G +D A  + + M   G+ P   T+   ID   K   +  A  + + + 
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLT 389

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   +V+ +S LIDGYC+ G++++   L ++M  KN SPN YTF  LI+ LC    L 
Sbjct: 390 EEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLK 449

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A     Q+    L P  + +N +I    K G+ D+A+  + +M     KP   T+   I
Sbjct: 450 EALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFI 509

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             +C  G++ EA  +  +M   G  PDD T  SLI    K G+   AF +++
Sbjct: 510 EVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 192/438 (43%), Gaps = 31/438 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++  LCE G  D    +F  M+ D   PN       +    R      A GLL + 
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEM 318

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      YNSL+    +  + D A  +          PD  T+   I  L +   V
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F  +   G S +++ Y+ LI G C+V +V     L +++  K+  SP+  T+ +
Sbjct: 379 EEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKN-CSPNAYTFNA 437

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  G + +A  ++++M   G+KP+  TFN+LI    K G+   A    ++M+S G
Sbjct: 438 LIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSG 497

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P   T+++ I+ YC  G++ +   +  +MK + + P+ +T+T LI A  K      A 
Sbjct: 498 EKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAF 557

Query: 458 RFLKQLKWNDLVPKPFMYNPVI------------------DGFCKAGNVDEANV------ 493
             LK +   D  P    +  +I                  +     G+V  +N+      
Sbjct: 558 DVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEF 617

Query: 494 -----IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
                +  EME+  C PD   +  LI G C    +  A+ + ++M + G +P ++  N++
Sbjct: 618 DIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAV 677

Query: 549 ISCLLKGGMPNEAFRIMQ 566
           ISC  K     EA  I++
Sbjct: 678 ISCCCKLQKYGEAANIVE 695



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G  DS   +   M+  G +P+      F+    ++ + + A+ L    
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSL 388

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+ +  MY+ L++   K    DEA  +F++       P+ +TFN LI GL   G +
Sbjct: 389 TEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNL 448

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A   F  M   G  P + T+N LI  + +  +    H+ L+++    E  P   TY +
Sbjct: 449 KEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE-KPVARTYNA 507

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I  YC  GK+ +A  +  +M   G+ P   T+  LI  +GK+G   SA  + + M    
Sbjct: 508 FIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD 567

Query: 398 YLPDVVTFSSLI-----------------------------DGYCRNGQLNQGLKLCDEM 428
             P   TF SLI                                 +  + +  ++L +EM
Sbjct: 568 CEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEM 627

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           +    +P+   +  LI+ +CK   L  A + L Q++   + P   ++N VI   CK    
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  IV +M      P       LI G   +G      S+F K+   G   D+I    L
Sbjct: 688 GEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKIL 747

Query: 549 ISCLLKGGMPNEAFRIMQRASED 571
           I  +LK G+  E  ++ +   ++
Sbjct: 748 IDGMLKQGLVEEFSQLFEEMEKN 770



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 172/411 (41%), Gaps = 30/411 (7%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TY   +  LC+    +  + +FD +  +G   N  M    +    + GK D A  L  +
Sbjct: 363 RTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEK 422

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 + + + +N+L++ L    N  EA+ +F +  ++  +P  +TFNILI  + + G+
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGD 482

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A +    M S G  P   TYN  I   C   +V    +++ ++K +    PD  TYT
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMK-EEGVPPDDFTYT 541

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI---------------------D 375
           S+I  Y KLG    A  +   M     +PS  TF  LI                      
Sbjct: 542 SLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVS 601

Query: 376 GFGKVGNMVSAEYMR--------ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            FG V      + M         E M   G  PD   +  LI G C+   L   LKL D+
Sbjct: 602 NFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQ 661

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+ + +SP+   F  +I+  CK  +  +A   ++ +  +   P+      +I G  + G 
Sbjct: 662 MQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGE 721

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
            +  N +  ++       D++ + ILI G   +G + E   +F +M + GC
Sbjct: 722 TERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGC 772



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 134/324 (41%), Gaps = 32/324 (9%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V + L  +  T+N+++  + + G  D        M S G  P +     F+     AGK 
Sbjct: 459 VKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKV 518

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A+ ++ Q +   V    F Y SL+ A  K      A  + K  F    +P   TF  L
Sbjct: 519 QEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSL 578

Query: 268 IQGL------------------SRIGEVKKA-----------FEFFYDMGSFGCSPDIVT 298
           I+ L                  S  G+V  +            E F +M   GC+PD   
Sbjct: 579 IKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKC 638

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y  LISG+C+V  +    +LL +++ K   SP  + + +VIS  CKL K  +A  I  +M
Sbjct: 639 YEKLISGICKVENLGIALKLLDQMQ-KEGISPSEMVFNAVISCCCKLQKYGEAANIVEDM 697

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G  P       LI G  + G       + +++   GY  D + +  LIDG  + G +
Sbjct: 698 ICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLV 757

Query: 419 NQGLKLCDEMK--GKNLSPNVYTF 440
            +  +L +EM+  G N SP  Y+ 
Sbjct: 758 EEFSQLFEEMEKNGCNFSPRTYSI 781


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 225/468 (48%), Gaps = 48/468 (10%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S+  +    +  +Y++++  LC+    D  + +F  M++ G +P+       +    R+G
Sbjct: 111 SQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSG 170

Query: 206 KCDAAKGLLSQFRP----GEVTMSTFM-------------------------------YN 230
           K + AK L ++        +VT S+ +                               Y+
Sbjct: 171 KWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYS 230

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF----EFFYD 286
           +L+  L  ++   EA  +F    +L  +PD   +  L++GL + G +  A     E   D
Sbjct: 231 TLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLND 290

Query: 287 MGSFG--CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            G +G  C P +++Y+ +I GLC+        EL KE+K +    PDV++YT++I G+C 
Sbjct: 291 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQG-IMPDVISYTTLIHGFCL 349

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK +KA  ++NEM   GI+P   T +VLID   K G ++ A  + E ++  G +PDVVT
Sbjct: 350 SGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVT 409

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
            ++L+ G C   ++++  +L  +M+     PNV T   L+  LC+   +  A    K + 
Sbjct: 410 CTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 469

Query: 465 WN------DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            +      +  P    Y+ +IDG CK G  DEA  +  EM+     PD +++T LI G C
Sbjct: 470 SDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 529

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             G+  +A  +FN+M+ IG  PD  T + LI  L K G   EA  +++
Sbjct: 530 RSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 577



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 217/451 (48%), Gaps = 12/451 (2%)

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           R  +    +  +Y++++  LC+    D  + +F  M++ G +P+       +     +GK
Sbjct: 293 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGK 352

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            + AK L ++     +       + L++ L K+    EA  + +   +    PD  T   
Sbjct: 353 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTT 412

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV---- 322
           L++GL     + KA + F  M   GC P++VT  TL+ GLC+   +    EL K +    
Sbjct: 413 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 472

Query: 323 -KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
             +     P+ ++Y+ +I G CK G+ D+A  ++ EM + G+ P  +++  LI GF + G
Sbjct: 473 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSG 532

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
               A+Y+   M+  G  PDV TFS LID  C+ G++ +  +L + M  +   PN  T+T
Sbjct: 533 KWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYT 592

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+  LC  +R+++A +   +++    +P    Y  ++ G C+ GN+  A  +  +M   
Sbjct: 593 TLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSD 652

Query: 502 RC------KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
                   KPD ++++I+I G C  GR  EA  +F +M  +G  P+ I+  SLI    + 
Sbjct: 653 TGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS 712

Query: 556 GMPNEAFRIMQRASEDQNLQLPSWKKAVPLR 586
           G   +A  +      DQ +QL +   +V + 
Sbjct: 713 GKLEDAKHLFNEMV-DQGVQLNAVTYSVMIH 742



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 193/377 (51%), Gaps = 15/377 (3%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + GK   A  LL         +    Y++L+  L  ++   EA  +F    +L  +PD  
Sbjct: 22  KEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAI 81

Query: 263 TFNILIQGLSRIGEVKKAF----EFFYDMGSFG--CSPDIVTYNTLISGLCRVNEVARGH 316
            +  L++GL + G++  A     E   D   +G  C P +V+Y+ +I GLC+        
Sbjct: 82  AYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEAR 141

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           EL KE+K +    PDV++YTS+I G+C+ GK +KA  ++NEM   GI+    T ++LID 
Sbjct: 142 ELFKEMKAQG-MMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDI 200

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K G ++ A  + E M+  G + D+VT+S+LI G C   ++++  +L   M+     P+
Sbjct: 201 LCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPD 260

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWND-------LVPKPFMYNPVIDGFCKAGNVD 489
              +  L+  LC+   +N A + L Q   ND         P    Y+ +IDG CK    D
Sbjct: 261 AIAYGTLMKGLCQTGNINTALQ-LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 319

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           EA  +  EM+ +   PD +++T LI G C+ G+  +A  +FN+ML +G  PD  T + LI
Sbjct: 320 EARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 379

Query: 550 SCLLKGGMPNEAFRIMQ 566
             L K G   EA ++++
Sbjct: 380 DMLCKKGKVIEANKLLE 396



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 203/417 (48%), Gaps = 13/417 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++   C  G  +  + +F+ M   G  P+       +    + GK   A  LL   
Sbjct: 339 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 398

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                        +L+  L  ++   +A  +F +  +L   P+  T   L++GL + G +
Sbjct: 399 IQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI 458

Query: 278 KKAFEFFYDMGS------FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           K A E   +M S        C P+ ++Y+ +I GLC+        EL KE+K      PD
Sbjct: 459 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI-PD 517

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V++YTS+I G+C+ GK   A  ++NEM   G++P   TF+VLID   K G ++ A  + E
Sbjct: 518 VISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 577

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G +P+ VT+++L+ G C N ++++  +L  +M+     P+V T+  L+  LC+  
Sbjct: 578 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 637

Query: 452 RLNDARRFLKQLKWN------DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            +  A    K++  +      +  P    Y+ +IDG CK G  DEA  +  EM+     P
Sbjct: 638 NIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 697

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           + +++T LI G C  G++ +A  +FN+M+  G   + +T + +I    K G  ++A 
Sbjct: 698 NVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 211/421 (50%), Gaps = 19/421 (4%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-----DAAKG 212
           Y  +M+ LC+ G ++ ++Q+  + +   G             S I  G C     D A+ 
Sbjct: 264 YGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 323

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L  + +   +      Y +L++        ++A  +F E   +  QPD  T ++LI  L 
Sbjct: 324 LFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC 383

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G+V +A +    +   GC PD+VT  TL+ GLC  + +++  +L  +++ K    P+V
Sbjct: 384 KKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ-KLGCMPNV 442

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNS----CGI--KPSAVTFNVLIDGFGKVGNMVSA 386
           VT  +++ G C+ G +  A  ++  M S     GI  KP+A++++++IDG  K G    A
Sbjct: 443 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 502

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + + M + G +PDV++++SLI G+CR+G+      L +EM    + P+V TF++LI+ 
Sbjct: 503 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 562

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCKE ++ +A   L+ +     +P    Y  ++ G C    + EA  +  +M++  C PD
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLR------IGCAPDDITVNSLISCLLKGGMPNE 560
            VT+  L+ G C  G +  A+ +  KML           PD I+ + +I  L K G  +E
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682

Query: 561 A 561
           A
Sbjct: 683 A 683



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 208/425 (48%), Gaps = 27/425 (6%)

Query: 159 YNLVMRSLCEMG-----LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-----D 208
           Y  +M+ LC+ G     LH   +++ D   S   +   P +  +  S I  G C     D
Sbjct: 83  YGTLMKGLCQTGKINIALHLHQEMLND--TSQYGIKCKPTLVSY--SIIIDGLCKDRRED 138

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A+ L  + +   +      Y SL++   +    ++A  +F E   +  + D  T ++LI
Sbjct: 139 EARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLI 198

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             L + G+V +A E    M   GC  DIVTY+TLI GLC  + ++    L   ++ K   
Sbjct: 199 DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQ-KLGC 257

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCG-----IKPSAVTFNVLIDGFGKVGN 382
            PD + Y +++ G C+ G ++ A  ++ EM N  G      KP+ ++++++IDG  K   
Sbjct: 258 RPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 317

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
              A  + + M + G +PDV+++++LI G+C +G+  +   L +EM    + P+V T ++
Sbjct: 318 EDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 377

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+ LCK+ ++ +A + L+ +     +P       ++ G C    + +A  +  +M++  
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR------IGCAPDDITVNSLISCLLKGG 556
           C P+ VT   L+ G C  G +  A+ +   ML       I C P+ I+ + +I  L K G
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497

Query: 557 MPNEA 561
             +EA
Sbjct: 498 REDEA 502



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 166/316 (52%), Gaps = 13/316 (4%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           QPD  T  +LI    + G+V +A E    M   GC  DIVTY+TLI GLC  + ++   +
Sbjct: 7   QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM----NSCGIK--PSAVTFN 371
           L   +K K    PD + Y +++ G C+ GK++ A  ++ EM    +  GIK  P+ V+++
Sbjct: 67  LFMSMK-KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           ++IDG  K      A  + + M + G +PDV++++SLI G+CR+G+  +   L +EM   
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
            +  +V T ++LI+ LCKE ++ +A   L+ +     +     Y+ +I G C    + EA
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR------IGCAPDDITV 545
             +   M++  C+PD + +  L+ G C  G +  A+ +  +ML       I C P  I+ 
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305

Query: 546 NSLISCLLKGGMPNEA 561
           + +I  L K    +EA
Sbjct: 306 SIIIDGLCKDRREDEA 321



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 153/291 (52%), Gaps = 7/291 (2%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  PD+ T   LI   C+  +V   +ELL EV  +     D+VTY+++I G C   
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELL-EVMVQRGCILDIVTYSTLIKGLCMKH 59

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS----FGYL--P 400
           ++ +AT ++  M   G +P A+ +  L+ G  + G +  A ++ + ML+    +G    P
Sbjct: 60  RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKP 119

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
            +V++S +IDG C++ + ++  +L  EMK + + P+V ++T LI+  C+  +   A+   
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF 179

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++    +       + +ID  CK G V EAN ++  M ++ C  D VT++ LI G CMK
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMK 239

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            R+ EA  +F  M ++GC PD I   +L+  L + G  N A ++ Q    D
Sbjct: 240 HRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLND 290



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 42/256 (16%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K+L    V++ +     T+++++  LC+ G       + + M   G +PN          
Sbjct: 538 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN---------- 587

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
                                    T  Y +L+  L   +   EA  +F +  +L   PD
Sbjct: 588 -------------------------TVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622

Query: 261 TWTFNILIQGLSRIGEVKKAFEF----FYDMGSFGCS--PDIVTYNTLISGLCRVNEVAR 314
             T+  L++GL + G +K A E       D G +G +  PD+++Y+ +I GLC+      
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             EL KE+K      P+V++YTS+I G+C+ GK++ A  ++NEM   G++ +AVT++V+I
Sbjct: 683 ARELFKEMKALGVI-PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741

Query: 375 DGFGKVGNMVSAEYMR 390
            GF K G +  A + +
Sbjct: 742 HGFCKEGQIDKALFQK 757


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 205/401 (51%), Gaps = 10/401 (2%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP----GEVTMST 226
           + D+ +VV   MR  G  P+       +   +RA     A  LL + R       ++   
Sbjct: 63  VQDAAEVVL-MMRDRGLAPSIRCCNALLKDLLRAD----AMALLWKVREFMVGAGISPDV 117

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           + Y++L+ A  K    D A  +  E        +T T+N+LI GL R G V++AF F  D
Sbjct: 118 YTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKD 177

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M  +G  PD  TY  LI+GLC+         LL E+   +E  P+VV Y ++I G+ + G
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREG 236

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
             D+A  +  EM + G++P+ +T++ L+ G  K+G M  A  + ++M+   + PD +T++
Sbjct: 237 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 296

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            +I+G+ R+       +L  EM+   +SPNVYT++I+I+ LC+      A   L+++   
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            L P  F+Y P+I G+C+ GNV  A  I  +M +    PD   +  LI G    GR+ E+
Sbjct: 357 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 416

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              F +M   G  P++ T + LI   LK G    A +++QR
Sbjct: 417 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 457



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 200/440 (45%), Gaps = 36/440 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+    +  + + D M      PN  +    +   +R G  D A  ++ + 
Sbjct: 189 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 248

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y++L+  L K    D A  + K+  R   +PDT T+N++I+G  R    
Sbjct: 249 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNK 308

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K AF    +M + G SP++ TY+ +I GLC+  E  +  +LL+E+  K    P+   Y  
Sbjct: 309 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG-LKPNAFVYAP 367

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGYC+ G +  A  I+++M    + P    +N LI G  KVG +  +     +M   G
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN--VYT---------------- 439
            LP+  T+S LI GY +NG L    +L   M    L PN  +Y                 
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487

Query: 440 -----------------FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                            + ILI+ L     +  A R L +++ N  VP   +Y+ +I G 
Sbjct: 488 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGL 547

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK  + ++A  I+ EM +K   P+ V +  LI G C  G +  A ++FN +L  G  P+ 
Sbjct: 548 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 607

Query: 543 ITVNSLISCLLKGGMPNEAF 562
           +T  SLI    K G  + AF
Sbjct: 608 VTYTSLIDGSCKVGDISNAF 627



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 213/445 (47%), Gaps = 2/445 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L+ + R D   L  K  EF  V   ++    TY+ ++ + C++   D+ + V   MR  G
Sbjct: 89  LKDLLRADAMALLWKVREF-MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERG 147

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
              N+      ++   R+G  + A G         +    F Y +L+N L K   ++EA 
Sbjct: 148 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 207

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  E      +P+   +  LI G  R G   +AF+   +M + G  P+ +TY+ L+ GL
Sbjct: 208 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 267

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C++ ++ R   LLK++  +    PD +TY  +I G+ +      A  + +EM + GI P+
Sbjct: 268 CKMGQMDRASLLLKQM-VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPN 326

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T++++I G  + G    A  + E M + G  P+   ++ LI GYCR G ++   ++ D
Sbjct: 327 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 386

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +M   N+ P++Y +  LI  L K  R+ ++ ++  Q++   L+P  F Y+ +I G+ K G
Sbjct: 387 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 446

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           +++ A  +V  M +   KP+ V +  L+  +     + +  S F  ML  G   D+    
Sbjct: 447 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 506

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
            LI  L   G    AFR++    ++
Sbjct: 507 ILIHNLSSSGNMEAAFRVLSEIEKN 531



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 214/416 (51%), Gaps = 7/416 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           TYN+++  LC  G   +V+  F +   M   G +P+       ++   ++ + + AK LL
Sbjct: 154 TYNVLIAGLCRSG---AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 210

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    E+  +  +Y +L++  +++ NADEA  M KE      QP+  T++ L++GL ++
Sbjct: 211 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 270

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++ +A      M      PD +TYN +I G  R +       LL E++  +  SP+V T
Sbjct: 271 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEME-NAGISPNVYT 329

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G C+ G+ +KA+ +  EM + G+KP+A  +  LI G+ + GN+  A  + ++M 
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
               LPD+  ++SLI G  + G++ +  K   +M+ + L PN +T++ LI+   K   L 
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + ++++    L P   +Y  +++ + K+ ++++ +     M ++    D   + ILI
Sbjct: 450 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                 G M  A  + +++ + G  PD    +SLIS L K     +AF I+   S+
Sbjct: 510 HNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 565



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 201/486 (41%), Gaps = 74/486 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++R LC+MG  D   ++   M  D H P++      +    R      A  LLS+ 
Sbjct: 259 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEM 318

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ + + Y+ +++ L +    ++A  + +E      +P+ + +  LI G  R G V
Sbjct: 319 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M      PD+  YN+LI GL +V  V    +   +++ +    P+  TY+ 
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG-LLPNEFTYSG 437

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF--------------------------- 370
           +I GY K G ++ A  +   M   G+KP+ V +                           
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497

Query: 371 --------NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                    +LI      GNM +A  +   +   G +PDV  +SSLI G C+     +  
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + DEM  K + PN+  +  LI+ LCK   ++ AR     +    LVP    Y  +IDG 
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTI------------------------------ 512
           CK G++  A  +  EM      PD   +++                              
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 677

Query: 513 ----LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---- 564
               L+ G C +G+M E + + + ++  G  P+ +T+ ++IS L + G  +E   I    
Sbjct: 678 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 737

Query: 565 MQRASE 570
            Q+ SE
Sbjct: 738 QQKTSE 743



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 192/402 (47%), Gaps = 28/402 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++    + G  +S + +   M   G  PN  +    + S  ++   +         
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +   +Y  L++ L    N + A  +  E  +  S PD   ++ LI GL +  + 
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KAF    +M   G  P+IV YN LI GLC+  +++    +   +  K    P+ VTYTS
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG-LVPNCVTYTS 612

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK+G +  A  +YNEM + GI P A  ++VL  G    G++  A ++ E M   G
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +   + +F++L+DG+C+ G++ + LKL   + G+ L PN  T   +I+ L +  +L++  
Sbjct: 673 H-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 731

Query: 458 RFLKQLK--------------WNDLVPKPFMYNPVIDGF----CKAGNVDEA----NVIV 495
               +L+              + D++ +  +   V+D      CK GN+D+A    +VIV
Sbjct: 732 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIV 791

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           A+     C     ++  ++   C KG++ EA+++  +M + G
Sbjct: 792 AKSAPMGCS----SYLAIVDNLCRKGKLSEALNLLKEMDKRG 829



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 5/262 (1%)

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +A  H  L +   +S    DV+  T     Y K G++  A  +   M   G+ PS    N
Sbjct: 32  LASIHRALSDSGHRSPAVLDVLVDT-----YKKSGRVQDAAEVVLMMRDRGLAPSIRCCN 86

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L+    +   M     +RE M+  G  PDV T+S+LI+ YC+  + +   K+  EM+ +
Sbjct: 87  ALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRER 146

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
               N  T+ +LI  LC+   + +A  F K ++   LVP  F Y  +I+G CK+   +EA
Sbjct: 147 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 206

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++ EM     KP+ V +  LI G   +G   EA  +  +M+  G  P+ IT ++L+  
Sbjct: 207 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 266

Query: 552 LLKGGMPNEAFRIMQRASEDQN 573
           L K G  + A  ++++   D +
Sbjct: 267 LCKMGQMDRASLLLKQMVRDSH 288



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 158/335 (47%), Gaps = 25/335 (7%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + Y +++ +L   G  ++   V   +  +G +P+  +    +S   +    + A G+L +
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 562

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +   YN+L++ L K  +   A  +F         P+  T+  LI G  ++G+
Sbjct: 563 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 622

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  AF  + +M + G +PD   Y+ L +G     ++ +   L++E+  +   S  + ++ 
Sbjct: 623 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS--ISSFN 680

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-----VSAEYMRE 391
           +++ G+CK GKM +   + + +   G+ P+A+T   +I G  + G +     +  E  ++
Sbjct: 681 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740

Query: 392 R--------------MLSFGYLP-DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
                          M++ G +P DVV    +I  +C+ G L++ L L D +  K+    
Sbjct: 741 TSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMG 798

Query: 437 VYTFTILINALCKENRLNDARRFLKQL-KWNDLVP 470
             ++  +++ LC++ +L++A   LK++ K  +L P
Sbjct: 799 CSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 833


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 203/412 (49%), Gaps = 6/412 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++++LC+    D    +   M + G  P+       +SS  + GK + A+ L  +F
Sbjct: 186 TYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF 245

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +P     +  +YN+L+N   ++    E   +  +       P+  T++ +I  LS IG V
Sbjct: 246 QP-----NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNV 300

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A   +  M   GCSP++ T+ +L+ G      V     +   +  +  F P+VV Y +
Sbjct: 301 ELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMA-EEGFEPNVVAYNT 359

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  GKM +A  + ++M   G  P+  T+  LIDGF K G++V A  +  +M++ G
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+VV ++S+++  CR+   +Q   L ++M   N  PN  TF   I  LC   R+  A 
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q++     P    YN V+DG  K   + EA  +V EMEEK  + + VT+  +  G 
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGF 539

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           C  G+  EA+ +  KML  G  PD IT N+L       G    A +++ + S
Sbjct: 540 CNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLS 591



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 214/449 (47%), Gaps = 29/449 (6%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +  H+  TY +++  L      D VQ +   M+ +G   +  +    +++  R G  + A
Sbjct: 74  AFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQA 133

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +  + R      +  +YN LL+A++ +N       ++    R   +P+ +T+NIL++ 
Sbjct: 134 LKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKA 193

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL------------ 318
           L +   V  A +   +M + GC PD+V+Y T+IS + ++ +V    EL            
Sbjct: 194 LCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYN 253

Query: 319 ------LKEVKFKSEF-----------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                  +E K K  F            P+V+TY++VIS    +G ++ A  ++ +M   
Sbjct: 254 ALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVR 313

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G  P+  TF  L+ G+   G ++ A  +  RM   G+ P+VV +++LI G C +G++ + 
Sbjct: 314 GCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEA 373

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           + +  +M+    SPNV T+  LI+   K   L  A     ++  N  +P   +Y  +++ 
Sbjct: 374 VSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNV 433

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C++    +A  ++ +M    C P+ VTF   I G C  GR+  AI++F +M + GC+P+
Sbjct: 434 LCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPN 493

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
             T N ++  LLK     EA  ++    E
Sbjct: 494 IKTYNEVLDGLLKENRIKEALELVTEMEE 522



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 182/369 (49%), Gaps = 6/369 (1%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           R    D  + LL Q +   ++ S  ++ +++N   +   A++A+ MF        QP   
Sbjct: 91  RECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVK 150

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            +N L+  +      +     + +M   G  P++ TYN L+  LC+ N V    +LL E+
Sbjct: 151 IYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEM 210

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K    PDVV+YT+VIS   KLGK+++A  +     S   +P+   +N LI+GF +   
Sbjct: 211 SNKG-CEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYK 264

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +     +  +M+  G  P+V+T+S++I      G +   L +  +M  +  SPNVYTFT 
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L+       R+ +A     ++      P    YN +I G C  G + EA  + ++ME   
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C P+  T+  LI G    G +V A  I+NKM+  GC P+ +   S+++ L +  M ++A+
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAW 444

Query: 563 RIMQRASED 571
            ++++ S D
Sbjct: 445 SLIEKMSTD 453



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 2/291 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++  LC  G       V   M  +G  PN       +    +AG    A  + ++ 
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +Y S++N L + +   +A  + ++       P+T TFN  I+GL   G V
Sbjct: 416 MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A   F  M  +GCSP+I TYN ++ GL + N +    EL+ E++ K     ++VTY +
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKG-MELNLVTYNT 534

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +  G+C +GK ++A  +  +M   G+KP A+T+N L   +   G + +A  + +++ + G
Sbjct: 535 IFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGG 594

Query: 398 -YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            ++P+V  ++SL+ G C    + + +   D+M  + +  N  T+  L+  L
Sbjct: 595 KWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 170/363 (46%), Gaps = 8/363 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+ SL  +G  +    V+  M   G  PN       +      G+   A  + ++ 
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+L++ L       EAV +  +  R    P+  T+  LI G ++ G++
Sbjct: 346 AEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL 405

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E +  M + GC P++V Y ++++ LCR +  ++   L++++       P+ VT+ +
Sbjct: 406 VGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMS-TDNCPPNTVTFNT 464

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I G C  G+++ A  ++ +M   G  P+  T+N ++DG  K   +  A  +   M   G
Sbjct: 465 FIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKG 524

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++VT++++  G+C  G+  + LKL  +M    + P+  T+  L  A C + ++  A 
Sbjct: 525 MELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAI 584

Query: 458 RFLKQL----KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + L +L    KW   VP+   Y  ++ G C    V+EA + + +M  +    +  T+  L
Sbjct: 585 QLLDKLSAGGKW---VPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNAL 641

Query: 514 IIG 516
           + G
Sbjct: 642 VRG 644



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 1/227 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y  ++  LC   +      + + M +D   PN+     F+     +G+ + A  L  Q 
Sbjct: 426 VYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM 485

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +   YN +L+ L+K+N   EA+ +  E      + +  T+N +  G   +G+ 
Sbjct: 486 EQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKF 545

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M   G  PD +TYNTL    C   +V    +LL ++    ++ P+V  YTS
Sbjct: 546 EEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTS 605

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG-FGKVGNM 383
           ++ G C    +++A    ++M + GI  +A T+N L+ G F  +G++
Sbjct: 606 LLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHL 652


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 203/403 (50%), Gaps = 12/403 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++  LC+ G H     +F  M+  G  PN       +     +G+  AA+ LL +  
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +++ +   YN+L+NA VK+    EA  ++ E       P+T T+N +I G  +   + 
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A + FY M + GCSPD+ T+ TLI G C    +  G ELL E+  +     + VTY ++
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP-RRGLVANTVTYNTL 434

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF-- 396
           I G+C +G ++ A  +  +M S G+ P  VT N L+DG    G +  A  M + M     
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 397 ---------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                    G  PDV+T++ LI G    G+  +  +L +EM  + + P+  T++ +I+ L
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK++RL++A +    +      P    +N +I+G+CKAG VD+   +  EM  +    D 
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           + +  LI G    G +  A+ IF +M+  G  PD IT+ ++++
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 184/352 (52%), Gaps = 7/352 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           + +LL+ L   +   EA+ +F +  R    PD  TF  L+ GL R G V +A      M 
Sbjct: 154 FTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMV 209

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD +TY T + G+C++ +      LL++++  S   P+VV Y+++I G CK G+ 
Sbjct: 210 ENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRH 269

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             +  ++ EM   GI P+ VT+N +I GF   G   +A+ + + ML     P+VVT+++L
Sbjct: 270 SDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNAL 329

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ + + G+  +  +L DEM  + + PN  T+  +I+  CK++RL+ A      +     
Sbjct: 330 INAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGC 389

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  F +  +IDG+C A  +D+   ++ EM  +    + VT+  LI G C+ G +  A+ 
Sbjct: 390 SPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALD 449

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           +  +M+  G  PD +T N+L+  L   G   +A   F+ MQ++  D +   P
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHP 501



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 207/429 (48%), Gaps = 13/429 (3%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCE--MGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVS 199
           E SR   S    F+  +L +RS      GL D++ +  D +RS    P   +I+F   + 
Sbjct: 33  EKSRDGESGEAGFRGESLKLRSGSYEIKGLEDAIDLFSDMLRSR---PLPSVIDFNKLMG 89

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           + +R  + D    L  +    ++    + +  L+      +    A+  F +  +L   P
Sbjct: 90  AVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHP 149

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  TF  L+ GL     V +A + F+ +    C PD++T+ TL++GLCR   V     LL
Sbjct: 150 DVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALL 205

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFG 378
             +  ++   PD +TY + + G CK+G    A  +  +M     IKP+ V ++ +IDG  
Sbjct: 206 DRM-VENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLC 264

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G    +  +   M   G  P++VT++ +I G+C +G+ +   +L  EM  + +SPNV 
Sbjct: 265 KDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVV 324

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  LINA  KE +  +A     ++    ++P    YN +IDGFCK   +D A  +   M
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K C PD  TFT LI G+C   R+ + + + ++M R G   + +T N+LI      G  
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444

Query: 559 NEAFRIMQR 567
           N A  + Q+
Sbjct: 445 NAALDLSQQ 453



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 201/422 (47%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY   +  +C+MG   S   +   M    H+ PN  +    +    + G+   +  L  +
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +  +   YN ++           A  + +E       P+  T+N LI    + G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TYN++I G C+ + +    ++   +  K   SPDV T+T
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG-CSPDVFTFT 397

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D    + +EM   G+  + VT+N LI GF  VG++ +A  + ++M+S 
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS-----------PNVYTFTILIN 445
           G  PD+VT ++L+DG C NG+L   L++   M+   +            P+V T+ ILI 
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +IDG CK   +DEA  +   M  K   P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTF  LI G+C  GR+ + + +F +M R G   D I   +LI    K G  N A  I 
Sbjct: 578 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 637

Query: 566 QR 567
           Q 
Sbjct: 638 QE 639



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 165/353 (46%), Gaps = 12/353 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +  + G       ++D M   G +PN+      +    +  + DAA+ +    
Sbjct: 325 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +   F + +L++        D+ + +  E  R     +T T+N LI G   +G++
Sbjct: 385 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS-------- 329
             A +    M S G  PDIVT NTL+ GLC   ++    E+ K ++ KS+          
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ-KSKMDLDASHPFN 503

Query: 330 ---PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PDV+TY  +I G    GK  +A  +Y EM   GI P  +T++ +IDG  K   +  A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             M   M S  + P+VVTF++LI+GYC+ G+++ GL+L  EM  + +  +   +  LI  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
             K   +N A    +++  + + P       ++ GF     ++ A  ++ +++
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 5/248 (2%)

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +S   P V+ +  ++    ++ + D    +Y +M    I+    +F +LI  F     +
Sbjct: 73  LRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKL 132

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A     ++   G  PDVVTF++L+ G C + ++++ L L  ++      P+V TFT L
Sbjct: 133 PFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTL 188

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KR 502
           +N LC+E R+ +A   L ++  N L P    Y   +DG CK G+   A  ++ +MEE   
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            KP+ V ++ +I G C  GR  ++ ++F +M   G  P+ +T N +I      G  + A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 563 RIMQRASE 570
           R++Q   E
Sbjct: 309 RLLQEMLE 316



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 4/177 (2%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LP V+ F+ L+    R  + +  + L  +M+ K +  ++Y+FTILI   C  ++L  A  
Sbjct: 78  LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 137

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              +L    L P    +  ++ G C    V EA     ++  + C+PD +TFT L+ G C
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEA----LDLFHQICRPDVLTFTTLMNGLC 193

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +GR+VEA+++ ++M+  G  PD IT  + +  + K G    A  ++++  E  +++
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 187/364 (51%), Gaps = 12/364 (3%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F+P  VT ST     LL+ L  ++   EA+ +F +  R    P+  TF  L+ GL R G 
Sbjct: 143 FQPDVVTFST-----LLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGR 193

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A      M   G  P+ +TY T++ G+C++ +      LL++++  S   P+VV Y+
Sbjct: 194 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYS 253

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G  K G+   A  +Y EM   GI P   T+N +IDGF   G    A+ + + ML  
Sbjct: 254 AIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLER 313

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+VVT+S+LI+ Y +  +  +  +L DEM  + + PN  T+  +I+  CK+NRL+ A
Sbjct: 314 KINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAA 373

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                 +      P  F +N +IDG+C A  +D+   ++ EM E     D  T+  LI G
Sbjct: 374 EHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHG 433

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
            C+ G +  A+ +  +M+  G  PD +T N+L+  L   G   +A   F+ MQ++  D +
Sbjct: 434 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 493

Query: 574 LQLP 577
              P
Sbjct: 494 ASRP 497



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 204/409 (49%), Gaps = 20/409 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGLL 214
           Y+ ++  L + G H     ++  M+  G  P+    + MI+ F SS    G+   A+ LL
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSS----GRWSEAQRLL 307

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    ++  +   Y++L+NA VK+    EA  ++ E       P+T T+N +I G  + 
Sbjct: 308 QEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQ 367

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +  A   FY M + GCSPD+ T+NTLI G C    +  G ELL E+  ++    D  T
Sbjct: 368 NRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT-ETGLVADTTT 426

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+C +G ++ A  +  +M S G+ P  VT N L+DG    G +  A  M + M 
Sbjct: 427 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486

Query: 395 SF-----------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                        G  PDV T++ LI G    G+  +  +L  EM  + + PN  T++ +
Sbjct: 487 KSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSM 546

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           IN LCK++RL++A +    +      P    +N ++ G+CKAG VD+   +  EM  +  
Sbjct: 547 INGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGI 606

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             D +T+  LI G    G +  A+ IF +M+  G  PD IT+ S+++ L
Sbjct: 607 VADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVL 655



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 203/422 (48%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C++G   S   +   M    H+ PN  +    +    + G+   A  L ++
Sbjct: 215 TYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTE 274

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +    F YN +++         EA  + +E       P+  T++ LI    +  +
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TYN++I G C+ N +     +   +  K   SPDV T+ 
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG-CSPDVFTFN 393

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D  T + +EM   G+     T+N LI GF  VG++ +A  + ++M+S 
Sbjct: 394 TLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISS 453

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL-----------SPNVYTFTILIN 445
           G  PD+VT ++L+DG C NG+L   L++   M+   +            P+V T+ ILI+
Sbjct: 454 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILIS 513

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    K++    +VP    Y+ +I+G CK   +DEA  +   M  K   P
Sbjct: 514 GLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 573

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D VTF  L+ G+C  GR+ + + +F +M R G   D IT  +LI    K G  N A  I 
Sbjct: 574 DVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIF 633

Query: 566 QR 567
           Q 
Sbjct: 634 QE 635



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 208/427 (48%), Gaps = 13/427 (3%)

Query: 146 SRVNLSLNHSFKTYNLVMRS-LCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSC 201
           SR   S    F+  +L +RS   E+ GL D++ +  D +RS    P   +I+F   +   
Sbjct: 31  SRDGESGEAGFRGESLKLRSGFHEIKGLEDAIDLFSDMVRSR---PLPSVIDFNKLMGVV 87

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           +R  + D    L  +    ++    + +N L+      +    A+  F +  +L  QPD 
Sbjct: 88  VRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDV 147

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TF+ L+ GL     V +A + F+ M    C P++VT+ TL++GLCR   V     LL  
Sbjct: 148 VTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDR 203

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKV 380
           +  +    P+ +TY +++ G CK+G    A  +  +M     IKP+ V ++ +IDG  K 
Sbjct: 204 M-VEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKD 262

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G    A  +   M   G  PD+ T++ +IDG+C +G+ ++  +L  EM  + ++PNV T+
Sbjct: 263 GRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTY 322

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           + LINA  KE +  +A     ++    ++P    YN +IDGFCK   +D A  +   M  
Sbjct: 323 SALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT 382

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K C PD  TF  LI G+C   R+ +   + ++M   G   D  T N+LI      G  N 
Sbjct: 383 KGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNA 442

Query: 561 AFRIMQR 567
           A  + Q+
Sbjct: 443 ALDLSQQ 449



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 179/387 (46%), Gaps = 12/387 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G     Q +   M      PN       +++ ++  K   A+ L  + 
Sbjct: 286 TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P  +  +T  YNS+++   KQN  D A +MF         PD +TFN LI G      +
Sbjct: 346 LPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI 405

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               E  ++M   G   D  TYNTLI G C V ++    +L +++   S   PD+VT  +
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM-ISSGVCPDIVTCNT 464

Query: 338 VISGYCKLGKMDKATGIYNEMNSC-----------GIKPSAVTFNVLIDGFGKVGNMVSA 386
           ++ G C  GK+  A  ++  M              G++P   T+N+LI G    G  + A
Sbjct: 465 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEA 524

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           E + + M   G +P+ +T+SS+I+G C+  +L++  ++ D M  K+ SP+V TF  L++ 
Sbjct: 525 EELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSG 584

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK  R++D      ++    +V     Y  +I GF K GN++ A  I  EM      PD
Sbjct: 585 YCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPD 644

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKM 533
            +T   ++     K  +  A+++   +
Sbjct: 645 TITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 12/330 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N +  TY+ ++ +  +       + ++D M   G +PN+      +    +  + DAA+
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAE 374

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +         +   F +N+L++        D+   +  E        DT T+N LI G 
Sbjct: 375 HMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGF 434

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF--- 328
             +G++  A +    M S G  PDIVT NTL+ GLC   ++    E+ K ++ KS+    
Sbjct: 435 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ-KSKMDLD 493

Query: 329 --------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
                    PDV TY  +ISG    GK  +A  +Y EM   GI P+ +T++ +I+G  K 
Sbjct: 494 ASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQ 553

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             +  A  M + M S  + PDVVTF++L+ GYC+ G+++ GL+L  EM  + +  +  T+
Sbjct: 554 SRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITY 613

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVP 470
             LI+   K   +N A    +++  + + P
Sbjct: 614 ITLIHGFRKVGNINGALDIFQEMISSGVYP 643



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 12/283 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C     D    +   M   G + ++      +      G  +AA  L  Q 
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM 450

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK---------EYFRLYS--QPDTWTFNI 266
               V       N+LL+ L       +A+ MFK         +  R ++  +PD  T+NI
Sbjct: 451 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNI 510

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI GL   G+  +A E + +M   G  P+ +TY+++I+GLC+ + +    ++   +  KS
Sbjct: 511 LISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKS 570

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            FSPDVVT+ +++SGYCK G++D    ++ EM   GI   A+T+  LI GF KVGN+  A
Sbjct: 571 -FSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
             + + M+S G  PD +T  S++       +L + + + ++++
Sbjct: 630 LDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 5/242 (2%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V+ +  ++    ++ + D    +Y +M    I     +FN+LI  F     +  A   
Sbjct: 75  PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++   G+ PDVVTFS+L+ G C   ++++ L L  +M      PNV TFT L+N LC+
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCR 190

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KRCKPDKV 508
           E R+ +A   L ++  + L P    Y  ++DG CK G+   A  ++ +MEE    KP+ V
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            ++ +I G    GR  +A +++ +M   G  PD  T N +I      G  +EA R++Q  
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310

Query: 569 SE 570
            E
Sbjct: 311 LE 312



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 4/203 (1%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L  GF ++  +  A  +   M+    LP V+ F+ L+    R  + +  + L  +M+ K 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  +VY+F ILI   C  ++L  A     ++      P    ++ ++ G C    V EA 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  +M    C+P+ VTFT L+ G C +GR+VEA+++ ++M+  G  P+ IT  +++  +
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 553 LKGGMPNEAFRIMQRASEDQNLQ 575
            K G    A  ++++  E  +++
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIK 246



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 94/213 (44%), Gaps = 3/213 (1%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           LC+     ++LE+ K +   K+ L   + SR    +    +TYN+++  L   G     +
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDL---DASRPFNGVEPDVQTYNILISGLINEGKFLEAE 525

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            ++  M   G +PN+      ++   +  + D A  +         +     +N+L++  
Sbjct: 526 ELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGY 585

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K    D+ + +F E  R     D  T+  LI G  ++G +  A + F +M S G  PD 
Sbjct: 586 CKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDT 645

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           +T  ++++ L    E+ R   +L++++   + S
Sbjct: 646 ITIRSMLTVLWSKEELKRAVAMLEDLQMSMDLS 678


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 225/436 (51%), Gaps = 13/436 (2%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK-------TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           ++G+K  +F+     L +++K        +++  + L E+G     + + D + S G + 
Sbjct: 167 EIGVKMTQFTH---RLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVV 223

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
                  F+S    A   +  +  +  F    ++ +T  YN ++ +L +     EA  + 
Sbjct: 224 TVDSCNAFLSRI--ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLL 281

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            +     S PD  +++ +I G   +GE+KKA +   DM   G  P+  TYN++I  LC++
Sbjct: 282 MQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKI 341

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            +     ++L+E+    +  PD V YT++I G+ KLG +  A   ++EM S  I P  +T
Sbjct: 342 GKSFEAEKVLREM-MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT 400

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +  LI GFG+ G ++  + +   M+S G  PD VT+++LID YC+ G++     L +EM 
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              ++PN+ T+  LI+ LCK   L+ A   L +++   L     +YN +++G CKAGN++
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  ++ EME     PD +T+T +I  +C  G + +A  +  +ML  G  P  +T N L+
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580

Query: 550 SCLLKGGMPNEAFRIM 565
           +     GM  +  R++
Sbjct: 581 NGFCMLGMLEDGDRLL 596



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 203/380 (53%), Gaps = 5/380 (1%)

Query: 170 GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMY 229
           G+  +++V  +Y    G   N+      + S  R GK   A  LL Q      T     Y
Sbjct: 241 GIEMAIKVFCEY----GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSY 296

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           +++++         +A+ +  +      +P+ +T+N +I  L +IG+  +A +   +M S
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS 356

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               PD V Y TLI G  ++  V   ++   E+    + SPD +TYT++I G+ + GK+ 
Sbjct: 357 QKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFGQGGKVI 415

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +   +++EM S G+KP  VT+  LID + K G MV+A  +   M+  G  P++VT+ +LI
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG C++G+L+   +L DEM+ K L  NV  +  ++N +CK   +  A + +K+++   + 
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  VID +C+ G++D+A+ ++ EM ++  +P  VTF +L+ G CM G + +   +
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595

Query: 530 FNKMLRIGCAPDDITVNSLI 549
              ML  G  PD IT N+L+
Sbjct: 596 LGWMLEKGIVPDAITYNTLM 615



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 209/426 (49%), Gaps = 3/426 (0%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           F    +S N +  +YN+++ SLC +G       +   M      P+       +      
Sbjct: 249 FCEYGISWNTT--SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G+   A  L+   +   +  + + YNS++  L K   + EA  + +E       PD   +
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
             LI G  ++G V+ A ++F +M S   SPD +TY TLI G  +  +V     L  E+  
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM-I 425

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
                PD VTYT++I  YCK G+M  A  ++NEM   G+ P+ VT+  LIDG  K G + 
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
           +A  + + M   G   +V  ++S+++G C+ G + Q +KL  EM+   + P+  T+T +I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +A C+   ++ A + L+++    L P    +N +++GFC  G +++ + ++  M EK   
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD +T+  L+  HC++  M     I+ +M   G APD  T N LI    K     EA+ +
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 565 MQRASE 570
            +   E
Sbjct: 666 YKEMIE 671



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 189/392 (48%), Gaps = 1/392 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ V+   C +G       + D M+  G  PN       +    + GK   A+ +L + 
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++     +Y +L++   K  +   A   F E       PD  T+  LIQG  + G+V
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +    F++M S G  PD VTY TLI   C+  E+     L  E+  +   +P++VTY +
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM-VQMGMTPNIVTYGA 473

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G++D A  + +EM   G++ +   +N +++G  K GN+  A  + + M   G
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +T++++ID YCR G +++  KL  EM  + L P V TF +L+N  C    L D  
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L  +    +VP    YN ++   C   +++    I   M  +   PD  T+ ILI GH
Sbjct: 594 RLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGH 653

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C    + EA  ++ +M+  G  P   + N+LI
Sbjct: 654 CKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 190/399 (47%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC++G     + V   M S   +P++ +    +    + G    A     + 
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +++     Y +L+    +     E   +F E      +PD  T+  LI    + GE+
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEM 449

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AF    +M   G +P+IVTY  LI GLC+  E+   +ELL E++ K     +V  Y S
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMR-KKGLQLNVCIYNS 508

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK G +++A  +  EM   GI P A+T+  +ID + ++G++  A  + + ML  G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVTF+ L++G+C  G L  G +L   M  K + P+  T+  L+   C  N +N   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  K+++   + P    YN +I G CKA N+ EA  +  EM EK   P   ++  LI   
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             K +++EA  +F +M   G   D    N  +    + G
Sbjct: 689 YKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 162/334 (48%), Gaps = 1/334 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           + TY  +++   + G     Q +F  M S G  P+       +    +AG+   A  L +
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHN 457

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +T +   Y +L++ L K    D A  +  E  +   Q +   +N ++ G+ + G
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG 517

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +++A +   +M   G  PD +TY T+I   CR+ ++ + H+LL+E+       P VVT+
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM-LDRGLQPTVVTF 576

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +++G+C LG ++    +   M   GI P A+T+N L+       +M +   + +RM +
Sbjct: 577 NVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRN 636

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD  T++ LI G+C+   L +   L  EM  K   P V ++  LI    K+ ++ +
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILE 696

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
           AR   ++++ + LV    +YN  +D   + G+V+
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 211/410 (51%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++R LC  G         D + S G   +       ++   + G+   A  LL + 
Sbjct: 121 TYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI 180

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     MYN++++ L K     +A  ++ E F     P+  T+  LI G   +G++
Sbjct: 181 EGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQL 240

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF    +M     +P++ T+NTL+ GLC+  ++     L+  V  K    PDV TY +
Sbjct: 241 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVA-VMMKEGVGPDVFTYNA 299

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY  + +  KA  ++N M   G+     +++V+I G  K+  +  A  + E M +  
Sbjct: 300 LMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN 359

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PDVV +SSLIDG C++G++N  LK  DEM  +   PNV T+T LI+ALCK ++++ A 
Sbjct: 360 VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAI 419

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK++K   +    + YN ++DG CK G + +A  +  ++  K    D VT++I+I G 
Sbjct: 420 ALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGL 479

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +    EA+++ +KM   GC PD I   ++I+   +  M ++A ++++ 
Sbjct: 480 CKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLRE 529



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 183/385 (47%), Gaps = 43/385 (11%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +  +L +LVK  +    +++F+       Q +  T NILI     + ++  AF  F  + 
Sbjct: 52  FGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKIL 111

Query: 289 SFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
             G  PDI+TY TLI GLC   +V E    H+ L     K     D V+Y ++I+G CK+
Sbjct: 112 KLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIK----LDHVSYGTLINGLCKI 167

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G+   A  +  ++     +P  V +N +IDG  K   +  A  +   M      P+VVT+
Sbjct: 168 GQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTY 227

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +SLI G+C  GQL++   L +EM  KN++PNV TF  L++ LCKE ++ +A+  +  +  
Sbjct: 228 TSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMK 287

Query: 466 NDLVPKPFMYNPVIDGF------CKAGNV-----------------------------DE 490
             + P  F YN ++DG+       KA NV                             DE
Sbjct: 288 EGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDE 347

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +   M  +   PD V ++ LI G C  GR+  A+   ++M   G  P+ IT  SLI 
Sbjct: 348 AMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLID 407

Query: 551 CLLKGGMPNEAFRIMQRASEDQNLQ 575
            L K    ++A  ++++  +DQ +Q
Sbjct: 408 ALCKSHQVDKAIALLKKI-KDQGIQ 431



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 168/340 (49%), Gaps = 1/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+  L      ++  M      PN       +      G+ D A GLL++  
Sbjct: 192 YNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMV 251

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  +   +N+L++ L K+    EA  +     +    PD +T+N L+ G   + E  
Sbjct: 252 LKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAG 311

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA   F  M   G + D+ +Y+ +ISGL ++  +    +L + ++      PDVV Y+S+
Sbjct: 312 KAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMR-NENVIPDVVAYSSL 370

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G+++ A    +EM+  G  P+ +T+  LID   K   +  A  + +++   G 
Sbjct: 371 IDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGI 430

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             ++ T++ L+DG C++G+L    K+  ++  K  + +V T++I+IN LCKE+  ++A  
Sbjct: 431 QANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALT 490

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            L +++    VP    Y  +I+ F +    D+A  ++ EM
Sbjct: 491 LLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 123/232 (53%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P ++ +  ++    K         ++  M   GI+ + +T N+LI+ +  +  + SA  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++L  GY PD++T+++LI G C NGQ+ + L   D +  + +  +  ++  LIN LCK
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             +   A R L++++     P   MYN +IDG CK   V +A  +  EM EKR  P+ VT
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +T LI G C+ G++ +A  + N+M+     P+  T N+L+  L K G   EA
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREA 278



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 1/204 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y++++  L +M + D    +F+ MR++  +P+       +    ++G+ ++A   + + 
Sbjct: 331 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 390

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y SL++AL K +  D+A+ + K+      Q + +T+NIL+ GL + G +
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRL 450

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F D+   G + D+VTY+ +I+GLC+ +       LL +++ K    PD + Y +
Sbjct: 451 TDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG-CVPDAIAYET 509

Query: 338 VISGYCKLGKMDKATGIYNEMNSC 361
           +I+ + +    DKA  +  EM  C
Sbjct: 510 IINAFFEKDMNDKAEKLLREMIDC 533



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 44/283 (15%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-----NSPMIEFFVSSCIRAG 205
           ++N +  T+N ++  LC+ G     + +   M  +G  P     N+ M  +F+     AG
Sbjct: 254 NVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVK--EAG 311

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K      +++Q     VT     Y+ +++ L K    DEA+ +F+        PD   ++
Sbjct: 312 KAKNVFNIMAQMG---VTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYS 368

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-- 323
            LI GL + G +  A ++  +M   G  P+++TY +LI  LC+ ++V +   LLK++K  
Sbjct: 369 SLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQ 428

Query: 324 --------------------------------FKSEFSPDVVTYTSVISGYCKLGKMDKA 351
                                                + DVVTY+ +I+G CK    D+A
Sbjct: 429 GIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEA 488

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
             + ++M   G  P A+ +  +I+ F +      AE +   M+
Sbjct: 489 LTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 72/173 (41%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RML     P ++ F  ++    +       + L   M+   +  N  T  ILIN+ C   
Sbjct: 39  RMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLR 98

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++N A     ++      P    Y  +I G C  G V E+      +  +  K D V++ 
Sbjct: 99  QINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYG 158

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            LI G C  G+   A+ +  K+    C PD +  N++I  L K  +  +AF +
Sbjct: 159 TLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDL 211



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/133 (21%), Positives = 68/133 (51%)

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P +  F  ++ +L K           ++++ + +       N +I+ +C    ++ A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            A++ +   +PD +T+T LI G C+ G++ E+++  ++++  G   D ++  +LI+ L K
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 555 GGMPNEAFRIMQR 567
            G    A R++++
Sbjct: 167 IGQTGPALRLLRK 179


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 200/408 (49%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY + ++S C  G   +   +   M   G   N+      V+     G  D A+ L  + 
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      +N L++AL K+    E+  +F +  +    P+ +TFNI IQGL + G +
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      +   G  PD+VTYNT+I GLCR + V    E L ++     F P+  TY S
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKM-VNGGFEPNDFTYNS 405

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK G +  A  I  +    G KP   T+  L++GF + G+   A  + +  L  G
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P ++ +++LI G C+ G +   L+L +EM  K   P+++T+ ++IN LCK   L+DA 
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDAN 525

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +        +P  F YN ++DG+C+   +D A  +V  M  +   PD +T+  L+ G 
Sbjct: 526 HLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGL 585

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C   +  E + IF  M   GCAP+ IT N++I  L      NEA  ++
Sbjct: 586 CKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLL 633



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 211/427 (49%), Gaps = 2/427 (0%)

Query: 145 FSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           F R++L + + S  +YN +M  L E G  +    V+  M+      +       + S  R
Sbjct: 178 FERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCR 237

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G+  AA  LL          +   Y +++    +  + D A  +F E       PD  T
Sbjct: 238 TGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTT 297

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN L+  L + G V ++   F  +   G  P++ T+N  I GLC+   + R   LL  V 
Sbjct: 298 FNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVS 357

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +    PDVVTY +VI G C+  ++ +A    ++M + G +P+  T+N +IDG+ K G +
Sbjct: 358 -REGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMV 416

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           V A  + +  +  G+ PD  T+ SL++G+C++G  +Q + +  +  GK L P++  +  L
Sbjct: 417 VDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTL 476

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I  LC++  +  A + + ++      P  + YN +I+G CK G + +AN ++ +   K C
Sbjct: 477 IKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGC 536

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            PD  T+  L+ G+C + ++  AI + N+M   G  PD IT N+L++ L K     E   
Sbjct: 537 IPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVME 596

Query: 564 IMQRASE 570
           I +  +E
Sbjct: 597 IFKAMTE 603



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 213/466 (45%), Gaps = 52/466 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN V+  LC        +     M + G  PN       +    + G    A  +L   
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDA 426

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P E     F Y SL+N   +  + D+A+ +FK+      +P    +N LI+GL 
Sbjct: 427 VFKGFKPDE-----FTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLC 481

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G +  A +   +M   GC PDI TYN +I+GLC++  ++  + L+ +   K    PD+
Sbjct: 482 QQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCI-PDI 540

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY +++ GYC+  K+D A  + N M S G+ P  +T+N L++G  K         + + 
Sbjct: 541 FTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKA 600

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  P+++T++++I+  C + ++N+ + L  EMK K L+P+V +F  LI   CK   
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 660

Query: 453 LNDAR------------------------------------RFLKQLKWNDLVPKPFMYN 476
           L+ A                                     R   ++K N   P  + Y 
Sbjct: 661 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +IDGFCK GNV++    + E  EK   P   TF  ++   C++ ++ EA+ I + M++ 
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQK 780

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL---QLPSW 579
              PD  TVN++     KG +   A+  +     D+ +   + P+W
Sbjct: 781 DIVPD--TVNTIFEADKKGHITYHAYEFLYDGVRDKKILKKKHPNW 824



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 211/479 (44%), Gaps = 72/479 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y  V+    E G +D  + +FD M      P+       V +  + G    ++ L  + 
Sbjct: 262 AYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKV 321

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  + F +N  +  L K+ + D AV +     R   +PD  T+N +I GL R   V
Sbjct: 322 LKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRV 381

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E  + M + G  P+  TYN++I G C+   V   + +LK+  FK  F PD  TY S
Sbjct: 382 VEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKG-FKPDEFTYCS 440

Query: 338 VISGYCKLGKMDKATGIY-----------------------------------NEMNSCG 362
           +++G+C+ G  D+A  ++                                   NEM   G
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            KP   T+N++I+G  K+G +  A ++    ++ G +PD+ T+++L+DGYCR  +L+  +
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 560

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L + M  + ++P+V T+  L+N LCK  +  +     K +      P    YN +I+  
Sbjct: 561 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG--------------------- 521
           C +  V+EA  ++ EM+ K   PD V+F  LI G C  G                     
Sbjct: 621 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHT 680

Query: 522 ---------------RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                           M  A+ +F++M + GC PD+ T   LI    K G  N+ ++ +
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL 739



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 204/421 (48%), Gaps = 12/421 (2%)

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI---RAGKCDAA 210
           H+  TY  +++ L   G  + ++ +   MRS+  L N+ +   +V +     R GK   A
Sbjct: 117 HTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN--LDNTLLEGVYVEAMRFYGRKGKIQEA 174

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS---QPDTWTFNIL 267
                +        S + YN+++N LV+    ++A    K Y R+     + D +T+ I 
Sbjct: 175 VDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQA---HKVYMRMKDKKVESDVYTYTIR 231

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+   R G    A     +M   GC  + V Y T+++G     +  R  EL  E+  +  
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM-LECC 290

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV T+  ++   CK G + ++  +++++   G+ P+  TFN+ I G  K G++  A 
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   +   G  PDVVT++++I G CR  ++ +  +   +M      PN +T+  +I+  
Sbjct: 351 RLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGY 410

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK+  + DA R LK   +    P  F Y  +++GFC+ G+ D+A  +  +   K  +P  
Sbjct: 411 CKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSI 470

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           + +  LI G C +G ++ A+ + N+M   GC PD  T N +I+ L K G  ++A  ++  
Sbjct: 471 IVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGD 530

Query: 568 A 568
           A
Sbjct: 531 A 531



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYNL++  LC+MG L D+  ++ D + + G +P+       V    R  K D+A  L+++
Sbjct: 507 TYNLIINGLCKMGCLSDANHLIGDAI-TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 565

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +T     YN+LLN L K   ++E + +FK        P+  T+N +I+ L    +
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 625

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A +   +M S G +PD+V++ TLI+G C+V ++   + L + ++ + + S    TY 
Sbjct: 626 VNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYN 685

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +IS + +   M  A  +++EM   G  P   T+ VLIDGF K GN+          +  
Sbjct: 686 IIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK 745

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G++P + TF  +++  C   ++ + + +   M  K++ P+  T   +  A  K +    A
Sbjct: 746 GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEADKKGHITYHA 803

Query: 457 RRFL------------KQLKWNDLVPKP 472
             FL            K   WN L  +P
Sbjct: 804 YEFLYDGVRDKKILKKKHPNWNSLRREP 831



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 15/265 (5%)

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC-------GIKPS 366
           R  +L+K  K K  F   + TY S++      GK ++   + +EM S        G+   
Sbjct: 103 RNLQLIK--KTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVE 160

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           A+ F      +G+ G +  A    ERM  F   P V +++++++     G  NQ  K+  
Sbjct: 161 AMRF------YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYM 214

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            MK K +  +VYT+TI I + C+  R   A R L+ +           Y  V+ GF + G
Sbjct: 215 RMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFG 274

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           + D A  +  EM E    PD  TF  L+   C KG ++E+  +F+K+L+ G  P+  T N
Sbjct: 275 DNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFN 334

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
             I  L K G  + A R++   S +
Sbjct: 335 IFIQGLCKEGSLDRAVRLLGCVSRE 359


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 225/436 (51%), Gaps = 13/436 (2%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK-------TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           ++G+K  +F+     L +++K        +++  + L E+G     + + D + S G + 
Sbjct: 167 EIGVKMTQFTH---RLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVV 223

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
                  F+S    A   +  +  +  F    ++ +T  YN ++ +L +     EA  + 
Sbjct: 224 TVDSCNAFLSRI--ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLL 281

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            +     S PD  +++ +I G   +GE+KKA +   DM   G  P+  TYN++I  LC++
Sbjct: 282 MQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKI 341

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            +     ++L+E+    +  PD V YT++I G+ KLG +  A   ++EM S  I P  +T
Sbjct: 342 GKSFEAEKVLREM-MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT 400

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +  LI GFG+ G ++  + +   M+S G  PD VT+++LID YC+ G++     L +EM 
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              ++PN+ T+  LI+ LCK   L+ A   L +++   L     +YN +++G CKAGN++
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  ++ EME     PD +T+T +I  +C  G + +A  +  +ML  G  P  +T N L+
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580

Query: 550 SCLLKGGMPNEAFRIM 565
           +     GM  +  R++
Sbjct: 581 NGFCMLGMLEDGDRLL 596



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 203/380 (53%), Gaps = 5/380 (1%)

Query: 170 GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMY 229
           G+  +++V  +Y    G   N+      + S  R GK   A  LL Q      T     Y
Sbjct: 241 GIEMAIKVFCEY----GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSY 296

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           +++++         +A+ +  +      +P+ +T+N +I  L +IG+  +A +   +M S
Sbjct: 297 STVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS 356

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               PD V Y TLI G  ++  V   ++   E+    + SPD +TYT++I G+ + GK+ 
Sbjct: 357 QKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFGQGGKVI 415

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +   +++EM S G+KP  VT+  LID + K G MV+A  +   M+  G  P++VT+ +LI
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALI 475

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG C++G+L+   +L DEM+ K L  NV  +  ++N +CK   +  A + +K+++   + 
Sbjct: 476 DGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID 535

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  VID +C+ G++D+A+ ++ EM ++  +P  VTF +L+ G CM G + +   +
Sbjct: 536 PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRL 595

Query: 530 FNKMLRIGCAPDDITVNSLI 549
              ML  G  PD IT N+L+
Sbjct: 596 LGWMLEKGIVPDAITYNTLM 615



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 209/426 (49%), Gaps = 3/426 (0%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           F    +S N +  +YN+++ SLC +G       +   M      P+       +      
Sbjct: 249 FCEYGISWNTT--SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G+   A  L+   +   +  + + YNS++  L K   + EA  + +E       PD   +
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
             LI G  ++G V+ A ++F +M S   SPD +TY TLI G  +  +V     L  E+  
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM-I 425

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
                PD VTYT++I  YCK G+M  A  ++NEM   G+ P+ VT+  LIDG  K G + 
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
           +A  + + M   G   +V  ++S+++G C+ G + Q +KL  EM+   + P+  T+T +I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +A C+   ++ A + L+++    L P    +N +++GFC  G +++ + ++  M EK   
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD +T+  L+  HC++  M     I+ +M   G APD  T N LI    K     EA+ +
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 565 MQRASE 570
            +   E
Sbjct: 666 YKEMIE 671



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 194/409 (47%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ V+   C +G       + D M+  G  PN       +    + GK   A+ +L + 
Sbjct: 295 SYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREM 354

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++     +Y +L++   K  +   A   F E       PD  T+  LIQG  + G+V
Sbjct: 355 MSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKV 414

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +    F++M S G  PD VTY TLI   C+  E+     L  E+  +   +P++VTY +
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM-VQMGMTPNIVTYGA 473

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G++D A  + +EM   G++ +   +N +++G  K GN+  A  + + M   G
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +T++++ID YCR G +++  KL  EM  + L P V TF +L+N  C    L D  
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L  +    +VP    YN ++   C   +++    I   M  +   PD  T+ ILI GH
Sbjct: 594 RLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGH 653

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C    + EA  ++ +M+  G  P   + N+LI    K     EA  + +
Sbjct: 654 CKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFE 702



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 188/399 (47%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC++G     + V   M S   +P++ +    +    + G    A     + 
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +++     Y +L+    +     E   +F E      +PD  T+  LI    + GE+
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEM 449

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AF    +M   G +P+IVTY  LI GLC+  E+   +ELL E++ K     +V  Y S
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMR-KKGLQLNVCIYNS 508

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK G +++A  +  EM   GI P A+T+  +ID + ++G++  A  + + ML  G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVTF+ L++G+C  G L  G +L   M  K + P+  T+  L+   C  N +N   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  K+++   + P    YN +I G CKA N+ EA  +  EM EK   P   ++  LI   
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             K +  EA  +F +M   G   D    N  +    + G
Sbjct: 689 YKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEG 727



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 161/334 (48%), Gaps = 1/334 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           + TY  +++   + G     Q +F  M S G  P+       +    +AG+   A  L +
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHN 457

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +T +   Y +L++ L K    D A  +  E  +   Q +   +N ++ G+ + G
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG 517

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +++A +   +M   G  PD +TY T+I   CR+ ++ + H+LL+E+       P VVT+
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEM-LDRGLQPTVVTF 576

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +++G+C LG ++    +   M   GI P A+T+N L+       +M +   + +RM +
Sbjct: 577 NVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRN 636

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD  T++ LI G+C+   L +   L  EM  K   P V ++  LI    K+ +  +
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXE 696

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
           AR   ++++ + LV    +YN  +D   + G+V+
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 210/411 (51%), Gaps = 19/411 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN+++R  C+ G +H +V  VF  M+S G LPN+  +   +      G+  +A  L  +
Sbjct: 27  TYNVLIRGFCKGGQMHQAVS-VFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFRE 85

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            + G    ++  +N LL        A  A+  FKE      +PD  +++IL+  LS  G 
Sbjct: 86  MQAGPFLPTSASHNILLRGFFM---AGRAIEFFKEMKASGVEPDLESYHILLSALSDSGR 142

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A   F  M    CSPDI+TYN L+ G C++ +      L+KE+  K+ + P+V TY+
Sbjct: 143 MAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI-LKAGYEPNVFTYS 198

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+ YCKL K+++A  ++ +M      P+AVTFN LI GF K G +  A  +   M   
Sbjct: 199 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 258

Query: 397 GYLPDVVTFSSLIDGYCRN-GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           G    +VT+++LID  C+  G +   + L ++++G  L+P + T+  LI       R ND
Sbjct: 259 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERAND 316

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
             R L  +      P    YN +I G C A  V++A  +   M    C P+  TF  LI 
Sbjct: 317 GLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFNFLIR 373

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           G C + ++ EA +I ++M     APD  T N++I    K G  ++A  +M+
Sbjct: 374 GLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMK 420



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 169/308 (54%), Gaps = 8/308 (2%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D+A+ +FKE       P+  T+N+LI+G  + G++ +A   F DM S G  P+  T NTL
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + GLC + +++   +L +E++    F P   ++  ++ G+   G+   A   + EM + G
Sbjct: 67  LLGLCEIGQMSSALKLFREMQ-AGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASG 122

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++P   ++++L+      G M  A  +   M      PD++T++ L+DGYC+ GQ  +  
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQ 179

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  E+      PNV+T++I+IN  CK +++ +A     ++  ++ VP    +N +I GF
Sbjct: 180 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 239

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK-GRMVEAISIFNKMLRIGCAPD 541
           CKAG +++A  + AEME+  CK   VT+  LI   C K G +  A+ +FNK+   G  P 
Sbjct: 240 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 299

Query: 542 DITVNSLI 549
            +T NSLI
Sbjct: 300 IVTYNSLI 307



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 184/401 (45%), Gaps = 42/401 (10%)

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           + A K D A  L  +   G    +   YN L+    K     +AV +F +       P+ 
Sbjct: 1   MSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNA 60

Query: 262 WTFNILIQGLSRIGEVK--------------------------------KAFEFFYDMGS 289
            T N L+ GL  IG++                                 +A EFF +M +
Sbjct: 61  STMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKA 120

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  PD+ +Y+ L+S L     +A  H L   +      SPD++TY  ++ GYCK+G+  
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAMT----CSPDIMTYNVLMDGYCKIGQTY 176

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  +  E+   G +P+  T++++I+ + K+  +  A  +  +M+    +P+ VTF++LI
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE-NRLNDARRFLKQLKWNDL 468
            G+C+ G L   +KL  EM+       + T+  LI++LCK+   +  A     +L+   L
Sbjct: 237 AGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGL 296

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I GF +  N  +   ++  M  + CKPD +T+  LI G C   R+ +A  
Sbjct: 297 TPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQR 354

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +FN M    CAP+  T N LI  L       EA  I+ R +
Sbjct: 355 LFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT 392



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 150/327 (45%), Gaps = 14/327 (4%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            ++Y++++ +L + G       +F  M      P+       +    + G+   A+ L+ 
Sbjct: 127 LESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMK 183

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +        + F Y+ ++N   K +  +EA  +F +       P+  TFN LI G  + G
Sbjct: 184 EILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAG 243

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV-NEVARGHELLKEVKFKSEFSPDVVT 334
            ++ A + F +M   GC   IVTYNTLI  LC+    V    +L  +++  +  +P +VT
Sbjct: 244 MLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE-GAGLTPTIVT 302

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y S+I G+ +  + +    +   M++ G KP  +T+N LI G      +  A+ +   M 
Sbjct: 303 YNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM- 359

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                P+V TF+ LI G C   ++ +   + D M     +P++ TF  +I A CK   ++
Sbjct: 360 --ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMH 413

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDG 481
           DAR  +K +  +   P  +    +  G
Sbjct: 414 DAREVMKDMLKHGFYPNTYTTYALAHG 440



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 13/292 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++M   C++G     Q +   +   G+ PN       ++   +  K + A  +  + 
Sbjct: 161 TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 220

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL-SRIGE 276
                  +   +N+L+    K    ++A+ +F E  ++  +    T+N LI  L  + G 
Sbjct: 221 IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG 280

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLC-RVNEVARGHELLKEVKFKSEFSPDVVTY 335
           V  A + F  +   G +P IVTYN+LI G   R N+   G  LL  +  +    PDV+TY
Sbjct: 281 VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAND---GLRLLCHMHAEG-CKPDVITY 336

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +ISG C   +++ A  ++N M +C   P+  TFN LI G      +  A  + +RM +
Sbjct: 337 NCLISGLCSANRVEDAQRLFNGM-ACA--PNVTTFNFLIRGLCAQKKVEEARNILDRMTA 393

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
               PD+ TF+++I  +C+ G ++   ++  +M      PN YT   L + +
Sbjct: 394 ----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 6/224 (2%)

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K D+A  ++ E+ +    P+A T+NVLI GF K G M  A  +   M S G LP+  T +
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +L+ G C  GQ++  LKL  EM+     P   +  IL+       R   A  F K++K +
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKAS 121

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            + P    Y+ ++     +G + EA+ + + M    C PD +T+ +L+ G+C  G+  EA
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            S+  ++L+ G  P+  T + +I+C  K     EA+ +  +  E
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 222



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%)

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A R  K++      P    YN +I GFCK G + +A  + ++M+     P+  T   L
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           ++G C  G+M  A+ +F +M      P   + N L+      G   E F+ M+ +  + +
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPD 126

Query: 574 LQ 575
           L+
Sbjct: 127 LE 128


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 212/428 (49%), Gaps = 20/428 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ V+ +LC+    D     F  MR+ G  PN       +    +  + D A  LL Q 
Sbjct: 110 SYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQL 169

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +  ++      YN+++N   +Q    E + +           +   FN ++  L +  E 
Sbjct: 170 KGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 229

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA +FF  +   G  P++VTYN  + GLC+  +V   + +L E+  +S+ +PDV+TY+S
Sbjct: 230 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEM-VESKVTPDVITYSS 288

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK G+MDKA  ++  M      P  VTF  L+ GF +      A  + E M++ G
Sbjct: 289 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 348

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++P + T++ L+D  C    +   L++  +MK K   P+  T+  LI  LC+  R+++A+
Sbjct: 349 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAK 408

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-----NV--------------IVAEM 498
            FL  ++ +++VP   + + +++  CK G VDEA     NV              ++ +M
Sbjct: 409 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQM 468

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K  +PD+ T+  ++   C   R+  AI+ F KM   GCAP  +T   LI       M 
Sbjct: 469 VLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMA 528

Query: 559 NEAFRIMQ 566
           ++AFRI +
Sbjct: 529 DDAFRIFE 536



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 187/343 (54%), Gaps = 5/343 (1%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           MY +++N   K    D+A  +  E      + D    + LIQGL R G + +A E F  M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS----PDVVTYTSVISGYC 343
           G   CSP+++TYNT+++GLC+ N +  G EL  +++ + E S    PDV++Y++VI   C
Sbjct: 61  GE-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K  ++DKA   +  M + G  P+ VT++ LIDG  KV  +  A  +  ++     +P  +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            ++++++G+ R G+ ++ L+L   MK K    N+  F  +++AL K +    A +F ++L
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
             +   P    YN  + G CKAG VDEA  I+ EM E +  PD +T++ +I G C  GRM
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +A  +F +M+   C P  +T  +L+    +     EAFR+ +
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 342



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 188/370 (50%), Gaps = 7/370 (1%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           +AG+ D A  LL + +   V M   ++++L+  L ++   DEA+  FK      S P+  
Sbjct: 11  KAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS-PNVI 69

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDM-----GSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           T+N ++ GL +   + +  E F DM      S GC PD+++Y+T+I  LC+   V + +E
Sbjct: 70  TYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 129

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
             K ++     +P+VVTY+S+I G CK+ ++D+A  +  ++    + P A+ +N +++GF
Sbjct: 130 YFKRMRAVG-CAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGF 188

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G       +   M   G+  +++ F++++    +N +  +  +  + +      PNV
Sbjct: 189 KRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNV 248

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+ + ++ LCK  ++++A R L ++  + + P    Y+ +IDGFCKAG +D+A+ +   
Sbjct: 249 VTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTR 308

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M    C P  VTF  L+ G     +  EA  +   M+  G  P   T N L+ C+     
Sbjct: 309 MMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADS 368

Query: 558 PNEAFRIMQR 567
              A  I  +
Sbjct: 369 VESALEIYHK 378



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 209/454 (46%), Gaps = 46/454 (10%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  V+   C+ G  D    + D M+  G   +  +    +    R G+ D A   L QF+
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEA---LEQFK 58

Query: 219 P--GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-----QPDTWTFNILIQGL 271
               E + +   YN+++N L K N  DE + +F +  + Y      +PD  +++ +I  L
Sbjct: 59  SMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +   V KA+E+F  M + GC+P++VTY++LI GLC+V+ V   + LL ++K   +  P 
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLK-GEDMVPR 177

Query: 332 VVTYTSVISGYCKLGK-----------------------------------MDKATGIYN 356
            + Y +V++G+ + GK                                    +KA   + 
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            +   G KP+ VT+NV + G  K G +  A  +   M+     PDV+T+SS+IDG+C+ G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++++   +   M      P+  TF  L++   +  +  +A R  + +     +P    YN
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++D  C A +V+ A  I  +M+ K+ +PD  T+  LI   C   R+ EA    + M   
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD 417

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              P+    ++L+  L K G  +EA  ++    E
Sbjct: 418 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 451



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 100/173 (57%), Gaps = 7/173 (4%)

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++++I+G+C+ GQ++Q  +L DEMK + +  +V   + LI  LC++ R+++A    K + 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-----CKPDKVTFTILIIGHCM 519
             +  P    YN V++G CKA  +DE   +  +ME++      C+PD ++++ +I   C 
Sbjct: 61  GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR-IMQRASED 571
             R+ +A   F +M  +GCAP+ +T +SLI  L K    +EA+  +MQ   ED
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGED 173


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 193/383 (50%), Gaps = 10/383 (2%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       ++   +AG+   A    +Q        +    N LL +L +    D+A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLC 307
           F+    +   P   T NILI G   +  + KA E F++M  +F   P+  TY  +I   C
Sbjct: 61  FRG---IQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPS 366
           +++ + +  +LL+E    S  S DV+  TSV  G+CK  ++D+A  +  +M      KP 
Sbjct: 118 KMDRLDQARQLLEE---SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            V +NV+I GF K G +  A  M E ++S G +P+ VT+++LIDG+C++G L++ L+L  
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 427 EMKGKN--LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +  ++    PNV TF  LI+ LCK +RL  A   +KQ+K  DL    F Y  ++DG CK
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G   E + +  EM  + C P  VT+T L+  HC  G + +A  +   M+  G  PD  T
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354

Query: 545 VNSLISCLLKGGMPNEAFRIMQR 567
              L+  L + G    A    ++
Sbjct: 355 YTVLLEGLFENGKVRTATEFFEK 377



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 209/409 (51%), Gaps = 8/409 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++  LC+ G        ++ M     +PN   I   ++S  +AG  D A  +   F
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI---F 61

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ-PDTWTFNILIQGLSRIGE 276
           R  + + S    N L+N   +    D+A+ +F E  + ++  P+  T+  +I+   ++  
Sbjct: 62  RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A +   +  S  CS D++   ++  G C+   V   ++LL ++  K    PD+V + 
Sbjct: 122 LDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWN 179

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G+CK G++ +A  +   + S G  P+AVT+  LIDGF K GN+  A  + + + S 
Sbjct: 180 VIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 397 GYL--PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            +   P+VVTF++LI G C+  +L    +L  +MK ++L  + +T+T L++ LCK+ R +
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +  R  +++      P    Y  ++   CKAG++ +A  ++  M  K   PD  T+T+L+
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            G    G++  A   F K+LR  C P  +  ++L+    K  + +EA +
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVK 408



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 5/371 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGL 213
           S  T N+++   CE+ L D    +F  M  +  L P +      +    +  + D A+ L
Sbjct: 69  SVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQL 128

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLS 272
           L +      +       S+     K    DEA  +  +     S +PD   +N++I G  
Sbjct: 129 LEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFC 186

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS-PD 331
           + G V++A+E    + S GC P+ VTY TLI G C+   ++   +L K +  +   + P+
Sbjct: 187 KAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVT+ ++ISG CK  +++ A  +  +M +  ++    T+  L+DG  K G       + E
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFE 306

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            ML  G  P VVT+++L+  +C+ G L    ++   M  K + P+V T+T+L+  L +  
Sbjct: 307 EMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENG 366

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++  A  F +++      P   +Y+ ++ G CKA  VDEA     EM ++R  PD  T  
Sbjct: 367 KVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCK 426

Query: 512 ILIIGHCMKGR 522
           +L+   C +GR
Sbjct: 427 LLVEMLCKRGR 437


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 226/472 (47%), Gaps = 23/472 (4%)

Query: 121 LSPLNSLEVIKRL-DNPKLGLKFLEFSRVNLSLNHSFKTY----NLVMRSLCEMGLHDSV 175
           L+P+   +++  L ++PKL LKF +++   +   H+ ++Y    +LV R+      HD+V
Sbjct: 68  LAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTV 127

Query: 176 QVVFDYMRSDGHLP-----------------NSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           + V    R D   P                  S + +   S  +  G  + A    S+ R
Sbjct: 128 KEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMR 187

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                      N LL+ L K  N       F +       P  +T+N++I  L + G+++
Sbjct: 188 NFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLE 247

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            +   F  M   G SPD+VTYN+LI G  +V  +     L  E+K      PD++TY  +
Sbjct: 248 NSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK-DVGCVPDIITYNGL 306

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+ YCK  KM +A   ++EM + G+KP+ VT++ LID F K G M  A  +   M   G 
Sbjct: 307 INCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGL 366

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LP+  T++SLID  C+ G L +  KL ++M    +  N+ T+T L++ LCK  R+ +A  
Sbjct: 367 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 426

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + +  + + P   +Y  ++ G+ KA  +++A  I+ +M E   KPD + +  +I GHC
Sbjct: 427 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 486

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            + ++ E   I  +M   G + + +   ++I    K G  ++A    Q   +
Sbjct: 487 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 538



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 201/404 (49%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            ++++     E+GL +     F  MR+   LP +    F +    ++G     +   +  
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S F YN +++ L K+ + + +  +F +   +   PD  T+N LI G  ++G +
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++    F +M   GC PDI+TYN LI+  C+  ++ R  E   E+K  +   P+VVTY++
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK-NNGLKPNVVTYST 340

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK G M  A  +  +M   G+ P+  T+  LID   K GN+  A  +   ML  G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++VT+++L+DG C+ G++ +  ++   M    +SPN   +T L++   K  R+ DA 
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + LKQ+   ++ P   +Y  +I G C    ++E  +I+ EM+ +    + V  T +I  +
Sbjct: 461 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 520

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              G+  +A++ F +M  +G     +T   LI  L + G+   A
Sbjct: 521 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELA 564



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 185/407 (45%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+          F  M+++G  PN       + +  + G    A  LL   
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + F Y SL++A  K  N  EA  +  +  +   + +  T+  L+ GL + G +
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 421

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F  M   G SP+   Y  L+ G  +   +    ++LK++  +    PD++ Y S
Sbjct: 422 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT-ECNIKPDLILYGS 480

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C   K+++   I  EM S GI  + V    +ID + K G    A    + M   G
Sbjct: 481 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               +VT+  LIDG C  G +   +     M    L PNV  +T LI+ LC  N +  A+
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAK 600

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   +++   + P    +  +IDG  K GN+ EA V+++ M E   + D   +T L+ G 
Sbjct: 601 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 660

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              G + +A   FN+M+  G  P+++    L+    K G  +EA  +
Sbjct: 661 SQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 182/380 (47%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ + C+ G+      +   MR  G LPN       + +  +AG    A  LL+  
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 396

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V ++   Y +LL+ L K     EA  +F+   +    P+   +  L+ G  +   +
Sbjct: 397 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 456

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A +    M      PD++ Y ++I G C   ++     +L+E+K +   S + V  T+
Sbjct: 457 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG-ISANPVISTT 515

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y K GK   A   + EM   G++ + VT+ VLIDG  + G +  A     RMLS G
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V  ++SLIDG C N  +    KL DEM+ + ++P++  FT LI+   K   L +A 
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 635

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++    +     +Y  ++ GF + G + +A     EM EK   P++V    L+  +
Sbjct: 636 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 695

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G++ EAI + N+M R+ 
Sbjct: 696 YKRGQLDEAIELKNEMERMA 715



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+ G     + VF  M  DG  PN  +    V   I+A + + A  +L Q 
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466

Query: 218 RPGEVTMSTFMYNSLL-----------------------------------NALVKQNNA 242
               +     +Y S++                                   +A  K   +
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            +A+  F+E   +  +    T+ +LI GL   G V+ A ++F  M S G  P++  Y +L
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVV----------------------------- 333
           I GLC  N +    +L  E++ +   +PD+                              
Sbjct: 587 IDGLCXNNCIESAKKLFDEMQCRG-MTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645

Query: 334 ------TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
                  YTS++SG+ + G++ +A   +NEM   GI P  V    L+  + K G +  A 
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705

Query: 388 YMRERMLSFGY 398
            ++  M    Y
Sbjct: 706 ELKNEMERMAY 716


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/361 (34%), Positives = 188/361 (52%), Gaps = 9/361 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+S     SLLN         EAV +  +   +  +PDT TFN LI GL    +
Sbjct: 147 YEPDIVTLS-----SLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 201

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M + GC PD+ TY T+++GLC+  ++     LLK+++ K +   +VV Y 
Sbjct: 202 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEANVVIYN 260

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G CK   MD A  ++N+M + GIKP   T+N LI      G    A  +   M+  
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER 320

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+VVTF+SLID + + G+L +  KL DEM  +++ PN+ T+  LIN  C  +RL++A
Sbjct: 321 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 380

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++    +   D +P    YN +I GFCKA  V+E   +  EM ++    + VT+  LI G
Sbjct: 381 QQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 440

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
               G    A  IF KM+  G  PD IT + L+  L K G   +A   F  +Q++  + N
Sbjct: 441 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPN 500

Query: 574 L 574
           +
Sbjct: 501 I 501



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 202/416 (48%), Gaps = 1/416 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL + H+  TY++++   C          V   M   G+ P+   +   ++      +  
Sbjct: 109 NLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 168

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q         T  +N+L++ L   N A EAV +         QPD +T+  ++
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 228

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G++  A      M       ++V YNT+I GLC+   +    +L  +++ K   
Sbjct: 229 NGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG-I 287

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV TY S+IS  C  G+   A+ + ++M    I P+ VTFN LID F K G ++ AE 
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M+     P++VT++SLI+G+C + +L++  ++   M  K+  P+V T+  LI   C
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC 407

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+ +     +++    LV     YN +I G  +AG+ D A  I  +M      PD +
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T++IL+ G C  G++ +A+ +F  + +    P+  T N +I  + K G   + + +
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDL 523



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 204/408 (50%), Gaps = 6/408 (1%)

Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           L E+ L D+V +  + ++S    P   +IEF   +S+  +  K D    L  Q +   + 
Sbjct: 57  LSELKLDDAVALFGEMVKSR---PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
            + + Y+ LLN   +++    A+ +  +  +L  +PD  T + L+ G      + +A   
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G  PD VT+NTLI GL   N+ +    L+  +  +    PD+ TY +V++G C
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVNGLC 232

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G +D A  +  +M    I+ + V +N +IDG  K  +M  A  +  +M + G  PDV 
Sbjct: 233 KRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T++SLI   C  G+ +   +L  +M  + ++PNV TF  LI+A  KE +L +A +   ++
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    YN +I+GFC    +DEA  I   M  K C PD VT+  LI G C   R+
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            E + +F +M + G   + +T N+LI  L + G  + A +I ++   D
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 460



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 197/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  L           + D M + G  P+       V+   + G  D A  LL + 
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G++  +  +YN++++ L K  + D+A  +F +      +PD +T+N LI  L   G  
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     DM     +P++VT+N+LI    +  ++    +L  E+  +    P++VTY S
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM-IQRSIDPNIVTYNS 366

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+C   ++D+A  I+  M S    P  VT+N LI GF K   +     +   M   G
Sbjct: 367 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 426

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + VT+++LI G  + G  +   K+  +M    + P++ T++IL++ LCK  +L  A 
Sbjct: 427 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 486

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + L+ + + P  + YN +I+G CKAG V++   +   +  K  KP+ + +T +I G 
Sbjct: 487 VVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 546

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C KG   EA ++F +M   G  PD    N+LI   L+ G
Sbjct: 547 CRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 585



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 196/408 (48%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+ G  D    +   M       N  +    +    +    D A  L ++ 
Sbjct: 223 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM 282

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YNSL++ L       +A  +  +       P+  TFN LI   ++ G++
Sbjct: 283 ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKL 342

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F +M      P+IVTYN+LI+G C  + +    ++   +    +  PDVVTY +
Sbjct: 343 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT-LMVSKDCLPDVVTYNT 401

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK  ++++   ++ EM+  G+  + VT+N LI G  + G+   A+ + ++M+S G
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++T+S L+DG C+ G+L + L + + ++   + PN+YT+ I+I  +CK  ++ D  
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGW 521

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P   +Y  +I GFC+ G  +EA+ +  EM+E    PD   +  LI   
Sbjct: 522 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 581

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              G    +  +  +M   G   D  T++ +I+ L  G +      ++
Sbjct: 582 LRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 629



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 2/273 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +  S++ +  TYN ++   C     D  Q +F  M S   LP+       +    +A + 
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +    L  +     +  +T  YN+L+  L +  + D A  +FK+       PD  T++IL
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G+++KA   F  +      P+I TYN +I G+C+  +V  G +L   +  K  
Sbjct: 473 LDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG- 531

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+V+ YT++ISG+C+ G  ++A  ++ EM   G  P +  +N LI    + G+  ++ 
Sbjct: 532 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 591

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            + + M S G++ D  T S +I+    +G+L +
Sbjct: 592 ELIKEMRSCGFVGDASTISMVIN-MLHDGRLEK 623



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 414 RNG----QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           RNG    +L+  + L  EM      P++  F+ L++A+ K N+ +      +Q++   + 
Sbjct: 54  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
              + Y+ +++ FC+   +  A  ++ +M +   +PD VT + L+ G+C   R+ EA+++
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ++M+ +G  PD +T N+LI  L      +EA  ++ R
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDR 211


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 219/428 (51%), Gaps = 14/428 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N ++ ++ +M   + V  + + M++ G   +      F++   R  +   A  +L
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           ++     + P  VT+S     SLLN         +AV +  +   +  +PDT+TF  LI 
Sbjct: 142 AKMMKLGYEPDIVTLS-----SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL    +  +A      M   GC PD+VTY T+++GLC+  ++     LLK+++ K +  
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME-KGKIE 255

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            DVV Y ++I G CK   MD A  ++ EM++ GI+P   T++ LI      G    A  +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+     P+VVTFS+LID + + G+L +  KL DEM  +++ P+++T++ LIN  C 
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +RL++A+   + +   D  P    Y+ +I GFCKA  V+E   +  EM ++    + VT
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
           +T LI G         A  +F +M+ +G  P+ +T N L+  L K G   +A   F  +Q
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495

Query: 567 RASEDQNL 574
           R++ + ++
Sbjct: 496 RSTMEPDI 503



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 200/416 (48%), Gaps = 1/416 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
            L ++H   TY++ +   C          V   M   G+ P+   +   ++    + +  
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q         TF + +L++ L   N A EAV +  +  +   QPD  T+  ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G++  A      M       D+V YNT+I GLC+   +     L  E+  K   
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-I 289

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV TY+S+IS  C  G+   A+ + ++M    I P+ VTF+ LID F K G +V AE 
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M+     PD+ T+SSLI+G+C + +L++   + + M  K+  PNV T++ LI   C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+ +     +++    LV     Y  +I GF +A + D A ++  +M      P+ +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T+ IL+ G C  G++ +A+ +F  + R    PD  T N +I  + K G   + + +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 203/423 (47%), Gaps = 37/423 (8%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + D M   G  P+       V+   + G  D A  LL +   G++     +YN++++ L 
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  + D+A+ +F E      +PD +T++ LI  L   G    A     DM     +P++V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T++ LI    +  ++    +L  E+  K    PD+ TY+S+I+G+C   ++D+A  ++  
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388

Query: 358 MNSCGIKPSAVTFNVLIDGF-------------------GKVGNMVS------------- 385
           M S    P+ VT++ LI GF                   G VGN V+             
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448

Query: 386 ---AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
              A+ + ++M+S G  P+++T++ L+DG C+NG+L + + + + ++   + P++YT+ I
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I  +CK  ++ D       L    + P    YN +I GFC+ G+ +EA+ ++ +M+E  
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             P+  T+  LI      G    +  +  +M   G A D  T+  L++ +L  G  +++F
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKSF 627

Query: 563 RIM 565
             M
Sbjct: 628 LDM 630



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 178/365 (48%), Gaps = 1/365 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L           S   +N LL+A+ K N  +  + + ++   L    D +T++
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           I I    R  ++  A      M   G  PDIVT ++L++G C    ++    L+ ++  +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VE 181

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             + PD  T+T++I G     K  +A  + ++M   G +P  VT+  +++G  K G++  
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + ++M       DVV ++++IDG C+   ++  L L  EM  K + P+V+T++ LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC   R +DA R L  +    + P    ++ +ID F K G + EA  +  EM ++   P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  T++ LI G CM  R+ EA  +F  M+   C P+ +T ++LI    K     E   + 
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421

Query: 566 QRASE 570
           +  S+
Sbjct: 422 REMSQ 426



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 167/319 (52%), Gaps = 1/319 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L N L      D+AV +F +  +    P    FN L+  ++++ + +        M + G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
            S D+ TY+  I+  CR ++++    +L ++  K  + PD+VT +S+++GYC   ++  A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             + ++M   G KP   TF  LI G         A  + ++M+  G  PD+VT+ ++++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G ++  L L  +M+   +  +V  +  +I+ LCK   ++DA     ++    + P 
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            F Y+ +I   C  G   +A+ ++++M E++  P+ VTF+ LI     +G++VEA  +++
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 532 KMLRIGCAPDDITVNSLIS 550
           +M++    PD  T +SLI+
Sbjct: 353 EMIKRSIDPDIFTYSSLIN 371



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 4/274 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +  S++    TY+ ++   C     D  + +F+ M S    PN       +    +A + 
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +    L  +     +  +T  Y +L++   +  + D A  +FK+   +   P+  T+NIL
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G++ KA   F  +      PDI TYN +I G+C+  +V  G EL   +  K  
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG- 533

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-VSA 386
            SP+V+ Y ++ISG+C+ G  ++A  +  +M   G  P++ T+N LI    + G+   SA
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           E ++E M S G+  D  T   L+     +G+L++
Sbjct: 594 ELIKE-MRSCGFAGDASTI-GLVTNMLHDGRLDK 625



 Score = 39.3 bits (90), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 52/109 (47%)

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           IL N L    +++DA      +  +   P    +N ++    K    +    +  +M+  
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
               D  T++I I   C + ++  A+++  KM+++G  PD +T++SL++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 213/416 (51%), Gaps = 3/416 (0%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN ++  LC+ G L+++  ++ D M+++G LPN       VS   + G    A  ++  
Sbjct: 249 SYNTILDVLCKKGKLNEARDLLLD-MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDL 307

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V    + YN L+  L K    DEA  +  E   L   PD  T+N LI G      
Sbjct: 308 MAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSS 367

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             K FE    M   G  P+ VTYN ++    +  ++      L++++ +S FSPD VT+ 
Sbjct: 368 SLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKME-ESGFSPDCVTFN 426

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I+GYCK G++ +A  + +EM+  G+K ++VT N ++        +  A  +       
Sbjct: 427 TLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKR 486

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           GY  D V++ +LI GY ++G+  + +KL DEMK K + P++ T+  +I  LC   + + +
Sbjct: 487 GYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQS 546

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L +L  + LVP    YN +I G+C+ G V++A     +M +K  KPD  T  IL+ G
Sbjct: 547 IDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRG 606

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            C +G + +A+ +FN  +  G A D +T N++IS L K     EAF ++    E +
Sbjct: 607 LCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKK 662



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 220/459 (47%), Gaps = 40/459 (8%)

Query: 145 FSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSV---QVVFDYMRSDGHLPNSPMIEFFVSS 200
           F+R+  L L  +  T N ++ +L       SV   + +F  +   G   N+      +  
Sbjct: 162 FNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYG 221

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           C    K   A GL+ + +          YN++L+ L K+   +EA  +  +       P+
Sbjct: 222 CCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPN 281

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             TFNIL+ G  ++G +K+A +    M      PD+ TYN LI GLC+  ++     L  
Sbjct: 282 RNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKD 341

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E++   +  PDVVTY ++I+G        K   + ++M   G+KP+AVT+NV++  + K 
Sbjct: 342 EME-NLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKE 400

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G M +A     +M   G+ PD VTF++LI+GYC+ G+L++  ++ DEM  K L  N  T 
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTL 460

Query: 441 TILINALCKENRLNDARRFLK-----------------------------------QLKW 465
             +++ LC E +L+DA + L                                    ++K 
Sbjct: 461 NTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKE 520

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
            +++P    YN +I G C +G  D++   + E+ E    PD+ T+  +I+G+C +G++ +
Sbjct: 521 KEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEK 580

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           A    NKM++    PD  T N L+  L   GM ++A ++
Sbjct: 581 AFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKL 619



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 188/347 (54%), Gaps = 6/347 (1%)

Query: 230 NSLLNALVKQNNADEAVYM----FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           N+L+NALV+   +  +VY+    F +  +L  + +T TFNILI G     ++ +A     
Sbjct: 178 NTLINALVRYP-SKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIG 236

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M  F C PD V+YNT++  LC+  ++    +LL ++K  +   P+  T+  ++SGYCKL
Sbjct: 237 KMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMK-NNGLLPNRNTFNILVSGYCKL 295

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G + +A  + + M    + P   T+N+LI G  K G +  A  +++ M +   LPDVVT+
Sbjct: 296 GWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTY 355

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           ++LI+G        +G +L D+M+GK + PN  T+ +++    KE ++++A   L++++ 
Sbjct: 356 NTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE 415

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           +   P    +N +I+G+CKAG + EA  ++ EM  K  K + VT   ++   C + ++ +
Sbjct: 416 SGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDD 475

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           A  + +   + G   D+++  +LI    K G   EA ++     E +
Sbjct: 476 AYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKE 522



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 179/384 (46%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G  D    + D M +   LP+       ++ C           L+ + 
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN ++   VK+   D A    ++       PD  TFN LI G  + G +
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRL 438

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF    +M   G   + VT NT++  LC   ++   ++LL     +  F  D V+Y +
Sbjct: 439 SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFV-DEVSYGT 497

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY K GK  +A  +++EM    I PS +T+N +I G    G    +      +L  G
Sbjct: 498 LIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESG 557

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD  T++++I GYCR GQ+ +  +  ++M  K+  P+++T  IL+  LC E  L+ A 
Sbjct: 558 LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKAL 617

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +                YN +I G CK    +EA  ++AEMEEK+  PD  T+  ++   
Sbjct: 618 KLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSAL 677

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
              GRM EA    ++++  G   D
Sbjct: 678 ADAGRMKEAEEFMSRIVEQGKLQD 701



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 151/293 (51%), Gaps = 4/293 (1%)

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE---VARGHELLKEVKFKSEFSPDVVTYT 336
           A + F  M      P+++T NTLI+ L R      V     +  +V  K     +  T+ 
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDV-IKLGVKVNTNTFN 216

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G C   K+ +A G+  +M      P  V++N ++D   K G +  A  +   M + 
Sbjct: 217 ILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNN 276

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G LP+  TF+ L+ GYC+ G L +  ++ D M   N+ P+V+T+ +LI  LCK+ ++++A
Sbjct: 277 GLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEA 336

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R   +++   L+P    YN +I+G     +  +   ++ +ME K  KP+ VT+ +++  
Sbjct: 337 FRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKW 396

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  +G+M  A +   KM   G +PD +T N+LI+   K G  +EAFR+M   S
Sbjct: 397 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMS 449



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 144/342 (42%), Gaps = 17/342 (4%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           E SR  L +N    T N ++ +LC E  L D+ +++    +  G+  +       +    
Sbjct: 447 EMSRKGLKMNSV--TLNTILHTLCGERKLDDAYKLLSSASKR-GYFVDEVSYGTLIMGYF 503

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + GK   A  L  + +  E+  S   YN+++  L      D+++    E       PD  
Sbjct: 504 KDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDET 563

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+N +I G  R G+V+KAF+F   M      PD+ T N L+ GLC    + +  +L    
Sbjct: 564 TYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTW 623

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K + + D VTY ++ISG CK  + ++A  +  EM    + P   T+N ++      G 
Sbjct: 624 ISKGK-AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGR 682

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  AE    R++  G L D                LN+          +   PN  TF+ 
Sbjct: 683 MKEAEEFMSRIVEQGKLQDQTI------------SLNKRKIESSSETSQESDPNSVTFSE 730

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            IN LC + +  DA   +++     +      Y  +++G  K
Sbjct: 731 QINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 45/214 (21%)

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           V   + I  Y    + +   ++ + MK  +L PN+ T   LINAL +    +    +L +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYP--SKPSVYLSK 197

Query: 463 LKWNDLVP-----KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV--------- 508
             ++D++          +N +I G C    + EA  ++ +M++  C PD V         
Sbjct: 198 AIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVL 257

Query: 509 --------------------------TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
                                     TF IL+ G+C  G + EA  + + M +    PD 
Sbjct: 258 CKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDV 317

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
            T N LI  L K G  +EAFR+     E +NL+L
Sbjct: 318 WTYNMLIGGLCKDGKIDEAFRL---KDEMENLKL 348


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 197/408 (48%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++R+LC  G       VFD M   G  P+       + +  +      A  LL + 
Sbjct: 253 TFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEM 312

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN L+NA+  + + DEA+ +         +PD  T+  +++ L      
Sbjct: 313 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERW 372

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+  E   +M S  C+PD VT+NT+++ LC+   V R  E++  +      + D+VTY+S
Sbjct: 373 KEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA-DIVTYSS 431

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C +G++D A  + + + S G KP  + +  ++ G         AE +   ML   
Sbjct: 432 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD 491

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VTF++++   C+ G +++ +++ ++M     SP++ T+  +I+ LC E+ ++DA 
Sbjct: 492 CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAM 551

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  L+     P    +N ++ G C     ++A  ++A M    C PD++TF  +I   
Sbjct: 552 ELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSL 611

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C KG + +AI     M   GC P+  T + ++  LLK G    A  ++
Sbjct: 612 CQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELL 659



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 227/457 (49%), Gaps = 13/457 (2%)

Query: 118 CEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFK--TYNLVMRSLCEMG-LHDS 174
           C  + P N L  IKRL +     +  +  RV  +L  S    TYN ++   C  G + D+
Sbjct: 184 CPPVVPCNIL--IKRLCSDG---RVSDAERVFAALGPSATVVTYNTMVNGYCRAGRIEDA 238

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
            +++            +P+I      C+R G+   A  +         + S   Y+ LL+
Sbjct: 239 RRLINGMPFPPDTFTFNPLIRAL---CVR-GRIPDALAVFDDMLHRGCSPSVVTYSILLD 294

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           A  K++   +A+ +  E      +PD  T+N+LI  +   G+V +A     ++ S GC P
Sbjct: 295 ATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKP 354

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D VTY  ++  LC         ELL E+   +  +PD VT+ ++++  C+ G +D+A  +
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEMT-SNNCAPDEVTFNTIVTSLCQQGLVDRAIEV 413

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            + M+  G     VT++ ++DG   VG +  A  +  R+ S+G  PD + +++++ G C 
Sbjct: 414 VDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 473

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
             Q  +  +L  EM   +  P+  TF  ++ +LC++  ++ A R ++Q+  N   P    
Sbjct: 474 TEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVT 533

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +IDG C    +D+A  ++++++   CKPD VTF  L+ G C   R  +A  +   M+
Sbjct: 534 YNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM 593

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           R  C PD++T N++I+ L + G+  +A   ++  +E+
Sbjct: 594 RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN 630



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 9/405 (2%)

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI--EFFVSSCIRAGKCDAAKGLLSQFRPG 220
           +RSL + G  D   V+FD M S G     P++     +      G+   A+ + +   P 
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
              ++   YN+++N   +    ++A  +      +   PDT+TFN LI+ L   G +  A
Sbjct: 217 ATVVT---YNTMVNGYCRAGRIEDARRLING---MPFPPDTFTFNPLIRALCVRGRIPDA 270

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
              F DM   GCSP +VTY+ L+   C+ +   +   LL E++ K    PD+VTY  +I+
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKG-CEPDIVTYNVLIN 329

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
             C  G +D+A  I + + S G KP AVT+  ++            E +   M S    P
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D VTF++++   C+ G +++ +++ D M       ++ T++ +++ LC   R++DA   L
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL 449

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            +LK     P    Y  V+ G C     + A  ++AEM    C PD+VTF  ++   C K
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           G +  AI +  +M   GC+PD +T N +I  L      ++A  ++
Sbjct: 510 GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELL 554



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 190/412 (46%), Gaps = 3/412 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY++++ + C+   +     + D MR+ G  P+       +++    G  D A  +L
Sbjct: 285 SVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNIL 344

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S             Y  +L +L       E   +  E       PD  TFN ++  L + 
Sbjct: 345 SNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQ 404

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V +A E    M   GC  DIVTY++++ GLC V  V    ELL  +K      PD + 
Sbjct: 405 GLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG-CKPDTIA 463

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT+V+ G C   + ++A  +  EM      P  VTFN ++    + G +  A  + E+M 
Sbjct: 464 YTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD+VT++ +IDG C    ++  ++L  +++     P++ TF  L+  LC  +R  
Sbjct: 524 ENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWE 583

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA + +  +  ++  P    +N VI   C+ G + +A   +  M E  C P+  T++I++
Sbjct: 584 DAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVV 643

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
                 G+   A+ + + M      PD IT N++IS L K G   EA  +++
Sbjct: 644 DALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLR 693



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 194/413 (46%), Gaps = 3/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ ++C  G  D    +   + S G  P++      + S   + +    + LL++ 
Sbjct: 323 TYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEM 382

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +N+++ +L +Q   D A+ +           D  T++ ++ GL  +G V
Sbjct: 383 TSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRV 442

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    + S+GC PD + Y T++ GLC   +  R  EL+ E+   S+  PD VT+ +
Sbjct: 443 DDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM-LCSDCPPDEVTFNT 501

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V++  C+ G +D+A  +  +M+  G  P  VT+N +IDG      +  A  +   + S G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VTF++L+ G C   +     +L   M   N  P+  TF  +I +LC++  L  A 
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             LK +  N  VP    Y+ V+D   KAG    A  +++ M      PD +T+  +I   
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNL 679

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              G+M EA+ +   M+  G  PD  T  SL   + +    + A R+++R  +
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQD 732



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 189/408 (46%), Gaps = 3/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++ SLC+ GL D    V D+M   G + +       +      G+ D A  LLS+ 
Sbjct: 393 TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL 452

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +       T  Y ++L  L      + A  +  E       PD  TFN ++  L + G V
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLV 512

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   GCSPDIVTYN +I GLC  + +    ELL +++      PD+VT+ +
Sbjct: 513 DRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ-SCGCKPDIVTFNT 571

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C + + + A  +   M      P  +TFN +I    + G +  A    + M   G
Sbjct: 572 LLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+  T+S ++D   + G+    L+L   M   N +P++ T+  +I+ L K  ++ +A 
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLSGMT--NGTPDLITYNTVISNLTKAGKMEEAL 689

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +  N L P    Y  +  G C+    D A  ++  +++    PD   +  +++G 
Sbjct: 690 DLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGF 749

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C   R   AI  F  M+  GC PD+ T   L+  L  GG+ +EA R++
Sbjct: 750 CRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLL 797



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 184/380 (48%), Gaps = 3/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC++G  D    +   ++S G  P++      +       + + A+ L+++ 
Sbjct: 428 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +       +N+++ +L ++   D A+ + ++       PD  T+N +I GL     +
Sbjct: 488 LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCI 547

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E   D+ S GC PDIVT+NTL+ GLC V+      +L+  +  +S   PD +T+ +
Sbjct: 548 DDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANM-MRSNCPPDELTFNT 606

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+  C+ G + +A      M   G  P++ T+++++D   K G   +A  +   M +  
Sbjct: 607 VITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG- 665

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++T++++I    + G++ + L L   M    L P+  T+  L   +C+E+  + A 
Sbjct: 666 -TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAV 724

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L++++   L P    YN V+ GFC+    D A    A M    C PD+ T+ IL+   
Sbjct: 725 RMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784

Query: 518 CMKGRMVEAISIFNKMLRIG 537
              G + EA  +   +  +G
Sbjct: 785 AYGGLLDEAKRLLASLCSLG 804



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 38/242 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N V+ SLC+ GL          M  +G +PNS      V + ++AGK  AA  LLS  
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G                                      PD  T+N +I  L++ G++
Sbjct: 663 TNG-------------------------------------TPDLITYNTVISNLTKAGKM 685

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M S G  PD  TY +L  G+CR +   R   +L+ V+  +  SPD   Y  
Sbjct: 686 EEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQ-DTGLSPDTTFYND 744

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G+C+  + D A   +  M S G  P   T+ +L++     G +  A+ +   + S G
Sbjct: 745 VLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804

Query: 398 YL 399
            L
Sbjct: 805 VL 806


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 201/397 (50%), Gaps = 8/397 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C++G  D    +FD     G +P+       ++   +A K D A+ +L + 
Sbjct: 47  TYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 106

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR-IGE 276
               +      YNSL+N L K    DEA  +  +  + +S P+  T++ LI GL R +  
Sbjct: 107 VSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD--KGFS-PNVITYSTLISGLCRELRG 163

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A + F  +   G  P++ TYN LI GL + + V    EL   +  K    PD +TYT
Sbjct: 164 VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL-VKHGLEPDAITYT 222

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
             I G CK G+++ A  +  +M+  G  P  V+ N +I+G  K   +  AE +   M + 
Sbjct: 223 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK---ENRL 453
           G  P+ ++F++LI G CR G+  + +    EM  + + P V T+ IL++ LCK   E R+
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A      +     VP    Y+ +IDG  KAG +D+A  ++  ME K C P+  T+  L
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           I G C   ++ EA+ +F  M+  GC PD IT  ++IS
Sbjct: 403 ISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 183/339 (53%), Gaps = 10/339 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P  +T     YN+LL+ L       +A  +++   +    PD  T+N L+ G  ++GE
Sbjct: 6   FWPNRIT-----YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A + F      G  PD+VTYN LI+G C+ +++     +L+ +       PDVVTY 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM-VSENLVPDVVTYN 119

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS-AEYMRERMLS 395
           S+++G CK G++D+A  +  +    G  P+ +T++ LI G  +    VS A  +   +L 
Sbjct: 120 SLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            GY P+V T++ LIDG  +  ++N+  +L   +    L P+  T+T+ I+ LCK  R+ D
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   LK +     VP    +N VI+G CK   VDEA V+++ ME K C P+ ++F  LI 
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           G C  G+  +A++ F +ML+ G  P  +T N L+  L K
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK 335



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 198/388 (51%), Gaps = 8/388 (2%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           MR  G  PN       +S     G+   A+ L  +      +     YN+LL+   K   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            DEA+ +F    +    PD  T+N LI G  +  ++ +A      M S    PD+VTYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK-LGKMDKATGIYNEMNS 360
           L++GLC+   V     L+ +      FSP+V+TY+++ISG C+ L  + +A  ++  +  
Sbjct: 121 LVNGLCKNGRVDEARMLIVD----KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G +P   T+N+LIDG  K   +  A  +   ++  G  PD +T++  IDG C+ G++  
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L +  +M  K   P+V +   +IN LCKE R+++A   L  ++     P    +N +I 
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC---MKGRMVEAISIFNKMLRIG 537
           G C+AG   +A     EM ++  KP  VT+ IL+ G C    +GR+ EAI++F+ M+  G
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIM 565
             PD +T ++LI  L K G  ++A R++
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLL 384



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 201/411 (48%), Gaps = 8/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G     Q +++ M   G+ P+       +    + G+ D A  +    
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN+L+N   K +  DEA  + +        PD  T+N L+ GL + G V
Sbjct: 72  VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR-VNEVARGHELLKEVKFKSEFSPDVVTYT 336
            +A     D G    SP+++TY+TLISGLCR +  V+   +L   V  K  + P+V TY 
Sbjct: 132 DEARMLIVDKGF---SPNVITYSTLISGLCRELRGVSEALKLFGSV-LKQGYEPEVPTYN 187

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G  K  ++++A  +++ +   G++P A+T+ V IDG  K G +  A  M + M   
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PDVV+ +++I+G C+  ++++   L   M+ K  SPN  +F  LI   C+  +   A
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKA---GNVDEANVIVAEMEEKRCKPDKVTFTIL 513
               K++    + P    YN ++DG CKA   G + EA  +   M EK   PD VT++ L
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 367

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           I G    G++ +A  +   M   GC P+  T NSLIS L      +EA  +
Sbjct: 368 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALEL 418



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 72/360 (20%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN ++   C+    D  Q +   M S+  +P+       V+   + G+ D A+ L+   
Sbjct: 82  TYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK 141

Query: 217 -FRPGEVTMSTFM-------------------------------YNSLLNALVKQNNADE 244
            F P  +T ST +                               YN L++ L+K++  +E
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  +F    +   +PD  T+ + I GL + G V+ A     DM   GC PD+V++N +I+
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+   V     LL  ++ K   SP+ +++ ++I G C+ GK  KA   + EM   G+K
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKG-CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 320

Query: 365 PSAVTFNVL--------------------------------------IDGFGKVGNMVSA 386
           P+ VT+N+L                                      IDG GK G +  A
Sbjct: 321 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 380

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   M + G +P+V T++SLI G C   ++++ L+L   M  K   P+  T+  +I+A
Sbjct: 381 RRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 203/396 (51%), Gaps = 4/396 (1%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F  ++ +   L ++G+ +     F  M+     P +      +    + GK D  K    
Sbjct: 25  FGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFK 84

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                    + F YN +++ + K+ + + A  +F+E       PDT T+N +I G  ++G
Sbjct: 85  DMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVG 144

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +     FF +M    C PD++TYN LI+  C+  ++ +G E  +E+K ++   P+VV+Y
Sbjct: 145 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMK-RNGLKPNVVSY 203

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           ++++  +CK G M +A   Y +M   G+ P+  T+  LID + K+GN+  A  +   ML 
Sbjct: 204 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQ 263

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   +VVT+++LIDG C      +GL L DEM   ++   V TF +LI+ LCK   ++ 
Sbjct: 264 VGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSK 323

Query: 456 ARRFLKQLKWND--LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           A  +  ++  ND  L     +Y  +IDG CK   V+ A  +  +M +K   PD+  +T L
Sbjct: 324 AIDYFGRIS-NDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           + G+  +G ++EA+++ +KM+  G   D +   SL+
Sbjct: 383 MDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLV 418



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 204/429 (47%), Gaps = 8/429 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++ N ++    ++G  D V+  F  M   G  P        +    + G  +AA+GL  +
Sbjct: 61  RSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEE 120

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +   T  YNS+++   K    D+ V  F+E   +  +PD  T+N LI    + G+
Sbjct: 121 MKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 180

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + K  EFF +M   G  P++V+Y+TL+   C+   + +  +   +++ +    P+  TYT
Sbjct: 181 LPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR-RVGLVPNEYTYT 239

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I  YCK+G +  A  + NEM   G++ + VT+  LIDG     N     ++ + M+  
Sbjct: 240 SLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVEL 299

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCKENRLND 455
                VVTF  LIDG C+N  +++ +     +     L  N   +T +I+ LCK N++  
Sbjct: 300 DIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEA 359

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    +Q+    LVP    Y  ++DG  K GNV EA  +  +M E   K D + +T L+ 
Sbjct: 360 ATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVW 419

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM------QRAS 569
           G     ++ +A S   +M+  G  PD++   S++    + G  NEA  +       Q  +
Sbjct: 420 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQLLT 479

Query: 570 EDQNLQLPS 578
            D +  LP+
Sbjct: 480 SDNDNALPN 488



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 160/317 (50%), Gaps = 1/317 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P    F+ L   L  +G V++A + F  M  F   P   + N L+    ++ +       
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            K++   +   P V TY  +I   CK G ++ A G++ EM   G+ P  VT+N +IDGFG
Sbjct: 83  FKDM-IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFG 141

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           KVG +       E M      PDV+T+++LI+ +C+ G+L +GL+   EMK   L PNV 
Sbjct: 142 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVV 201

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           +++ L++A CKE  +  A +F   ++   LVP  + Y  +ID +CK GN+ +A  +  EM
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +   + + VT+T LI G C      E + + ++M+ +      +T   LI  L K  + 
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321

Query: 559 NEAFRIMQRASEDQNLQ 575
           ++A     R S D  LQ
Sbjct: 322 SKAIDYFGRISNDFGLQ 338


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 193/383 (50%), Gaps = 10/383 (2%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       ++   +AG+   A    +Q        +    N LL +L +    D+A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLC 307
           F+    +   P   T NILI G   +  + KA E F++M  +F   P+  TY  +I   C
Sbjct: 61  FRG---IQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPS 366
           +++ + +  +LL+E    S  S DV+  TSV  G+CK  ++D+A  +  +M      KP 
Sbjct: 118 KMDRLDQARQLLEE---SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            V +NV+I GF K G +  A  M E ++S G +P+ VT+++LIDG+C++G L++ L+L  
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 427 EMKGKN--LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +  ++    PNV TF  LI+ LCK +RL  A   +KQ+K  DL    F Y  ++DG CK
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G   E + +  EM  + C P  VT+T L+  HC  G + +A  +   M+  G  PD  T
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354

Query: 545 VNSLISCLLKGGMPNEAFRIMQR 567
              L+  L + G    A    ++
Sbjct: 355 YTVLLEGLFENGKVRTATEFFEK 377



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 210/409 (51%), Gaps = 8/409 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++  LC+ G        ++ M     +PN   I   ++S  +AGK D A  +   F
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI---F 61

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ-PDTWTFNILIQGLSRIGE 276
           R  + + S    N L+N   +    D+A+ +F E  + ++  P+  T+  +I+   ++  
Sbjct: 62  RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A +   +  S  CS D++   ++  G C+   V   ++LL ++  K    PD+V + 
Sbjct: 122 LDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWN 179

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G+CK G++ +A  +   + S G  P+AVT+  LIDGF K GN+  A  + + + S 
Sbjct: 180 VIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 397 GYL--PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            +   P+VVTF++LI G C+  +L    +L  +MK ++L  + +T+T L++ LCK+ R +
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +  R  +++      P    Y  ++   CKAG++ +A  ++  M  K   PD  T+T+L+
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            G    G++  A   F K+LR  C P  +  ++L+    K  + +EA +
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVK 408



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 179/371 (48%), Gaps = 5/371 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGL 213
           S  T N+++   CE+ L D    +F  M  +  L P +      +    +  + D A+ L
Sbjct: 69  SVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQL 128

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLS 272
           L +      +       S+     K    DEA  +  +     S +PD   +N++I G  
Sbjct: 129 LEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFC 186

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS-PD 331
           + G V++A+E    + S GC P+ VTY TLI G C+   ++   +L K +  +   + P+
Sbjct: 187 KAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPN 246

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVT+ ++ISG CK  +++ A  +  +M +  ++    T+  L+DG  K G       + E
Sbjct: 247 VVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFE 306

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            ML  G  P VVT+++L+  +C+ G L    ++   M  K + P+V T+T+L+  L +  
Sbjct: 307 EMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENG 366

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++  A  F +++      P   +Y+ ++ G CKA  VDEA     EM ++R  PD  T  
Sbjct: 367 KVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCK 426

Query: 512 ILIIGHCMKGR 522
           +L+   C +GR
Sbjct: 427 LLVEMLCKRGR 437


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 248/535 (46%), Gaps = 64/535 (11%)

Query: 95  FVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFS-------- 146
           F ++V + L    Y+     R LCE    + + EVI R+++    L    ++        
Sbjct: 203 FDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262

Query: 147 --RV-------NL----SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
             RV       NL     L     TY  ++  LC++   ++ + + + M   G +P+   
Sbjct: 263 NQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
           +   V    + G   +A  L+++ +   V  S F+YN+L+N++ K    DEA  +F    
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
                P+  T++ILI    + G++  A  F   M   G    +  Y++LISG C++ ++ 
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               L  E+   +   P+VV YTS+ISGYCK G++  A  +Y+EM   GI P+  TF  L
Sbjct: 443 AAKSLFDEM-IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G      M  A  +   M+ +  +P+ VT++ LI+G+C+ G   +  +L DEM  K L
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 434 SPNVYTFTILINALCKENRLNDARRFL-----KQLKWNDL---VPKPFMYNPVIDGFCKA 485
            P+ YT+  LI+ LC   R+++AR F+     +Q K N++   +P    Y  +I+G CK 
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKI 621

Query: 486 GNVDEANVIVAEMEEKRCKPDK----------------------------------VTFT 511
           G +D+A ++  EM      P++                                  VT+ 
Sbjct: 622 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYN 681

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           ILI G C  GR+ EA  +   M+  G +PD I+ +++I    + G   EA ++ +
Sbjct: 682 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 736



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 203/418 (48%), Gaps = 10/418 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   YN ++ S+C+ G  D  + +F+ M   G  PN       + S  + GK D A   L
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  + + Y+SL++   K      A  +F E      +P+   +  LI G  + 
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           GE+  AF  +++M   G SP+  T+  LISGLC  N +A  ++L  E+  +    P+ VT
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM-VEWNVIPNEVT 532

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYM---- 389
           Y  +I G+CK G   +A  + +EM   G+ P   T+  LI G    G +  A E+M    
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 390 --RERMLSF-GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             ++++    G LP+VVT+++LI+G C+ G +++   LC EM   N  PN  T+   ++ 
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 652

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           L  E  +  A + L  +     +     YN +I GFCK G + EA  ++  M +    PD
Sbjct: 653 LTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 711

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            ++++ +I  +C +G + EAI ++  ML  G  PD +  N LI      G   +AF +
Sbjct: 712 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 769



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 192/405 (47%), Gaps = 6/405 (1%)

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           M LH     +FD + S G  P+  +    V S         A+ ++ +       +S   
Sbjct: 198 MALH-----LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVAT 252

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN  +  L K     EAV +         + D  T+  L+ GL ++ E +   E   +M 
Sbjct: 253 YNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMI 312

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            FG  P     + L+ GL +   +    +L+ +VK K   +P +  Y ++I+  CK GK+
Sbjct: 313 EFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK-KFGVAPSLFVYNALINSMCKDGKL 371

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  ++N M   G+ P+ VT+++LID F K G +  A +   +M   G    V  +SSL
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G+C+ G+L     L DEM    L PNV  +T LI+  CKE  L++A R   ++    +
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  + +  +I G C A  + EAN +  EM E    P++VT+ +LI GHC +G  V A  
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           + ++M+  G  PD  T   LIS L   G  +EA   M     +Q 
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ 596



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 236/501 (47%), Gaps = 39/501 (7%)

Query: 91  NEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNL 150
           N+ W V       L +S++S T   +  EK+       +I+ LD+ +L L+F  F  ++ 
Sbjct: 41  NQSWRVA------LNNSFISQTLKPHHVEKV-------LIQTLDDSRLALRFFNFLGLHK 87

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           + +HS  ++ +++ +L +  L+     +   +   G  P   + E F+ S     KC+ +
Sbjct: 88  NFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEG-LFESFLDS---YRKCNFS 143

Query: 211 KGL--------LSQFR---PGEVTMSTFM----------YNSLLNALVKQNNADEAVYMF 249
             L          Q R    G V +   M           + +LN L++      A+++F
Sbjct: 144 TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLF 203

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            E      +PD + +  +++ L  + +  +A E    M S GC   + TYN  I GLC+ 
Sbjct: 204 DEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKN 263

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             V    E+   + +K     DV TY +++ G CK+ + +    + NEM   G  PS   
Sbjct: 264 QRVWEAVEIKNLLSYKG-LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
            + L+DG  K GN+ SA  +  ++  FG  P +  +++LI+  C++G+L++   L + M 
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K L PN  T++ILI++ CK  +L+ A  FL ++    +    + Y+ +I G CK G + 
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A  +  EM     KP+ V +T LI G+C +G +  A  ++++M   G +P+  T  +LI
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502

Query: 550 SCLLKGGMPNEAFRIMQRASE 570
           S L       EA ++     E
Sbjct: 503 SGLCHANRMAEANKLFGEMVE 523



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 186/368 (50%), Gaps = 8/368 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++   C++G   + + +FD M ++G  PN  +    +S   + G+   A  L  +  
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++ +T+ + +L++ L   N   EA  +F E       P+  T+N+LI+G  + G   
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-------FSPD 331
           +AFE   +M   G  PD  TY  LISGLC    V+   E + +++ + +         P+
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPN 607

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTYT++I+G CK+G MDKA  +  EM +    P+  T+   +D     GN+  A  + +
Sbjct: 608 VVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD 667

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            +L  G+L + VT++ LI G+C+ G++ +  ++   M    +SP+  +++ +I   C+  
Sbjct: 668 VLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRG 726

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L +A +  + +    + P    YN +I G C  G + +A  +  +M  +  KP++ T+ 
Sbjct: 727 DLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 786

Query: 512 ILIIGHCM 519
            LI G C+
Sbjct: 787 SLIHGTCL 794



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 155/350 (44%), Gaps = 44/350 (12%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           Y  ++   C+ G LH++ ++ +  M   G  PN+      +S    A +   A  L  + 
Sbjct: 463 YTSLISGYCKEGELHNAFRL-YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN L+    K+ N   A  +  E       PDT+T+  LI GL   G V
Sbjct: 522 VEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRV 581

Query: 278 KKAFEFFYDMGSF--------GCSPDIVTYNTLISGLCRVNEVARGHELLKEV------- 322
            +A EF  D+           GC P++VTY  LI+GLC++  + +   L +E+       
Sbjct: 582 SEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLP 641

Query: 323 ----------KFKSE----------------FSPDVVTYTSVISGYCKLGKMDKATGIYN 356
                        SE                F  + VTY  +I G+CKLG++ +A  +  
Sbjct: 642 NQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M   GI P  ++++ +I  + + G++  A  + E ML+ G  PD V ++ LI G C  G
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 761

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND-ARRFLKQLKW 465
           +L +  +L D+M  + + PN  T+  LI+  C  + ++  A  F  +L W
Sbjct: 762 ELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLNW 811


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 217/422 (51%), Gaps = 11/422 (2%)

Query: 155  SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            S   +  V+ ++ +M   D V  +F  M + G   +       +    R  +   A  LL
Sbjct: 614  SIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALL 673

Query: 215  SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
             +     F+P  VT+      SLLN   + N   EAV +      L  +P+   +N +I 
Sbjct: 674  GKMMKLGFQPSIVTLG-----SLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVIN 728

Query: 270  GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            GL +  ++  A E FY M   G   D VTYNTLISGLC          LL+++  K +  
Sbjct: 729  GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDM-VKRKID 787

Query: 330  PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            P+V+ +T++I  + K G + +A  +Y EM    + P+ +T+N LI+GF   G +  A++M
Sbjct: 788  PNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHM 847

Query: 390  RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             + M+S G  PDVVT+++LI G+C++ ++  G+KL  EM  + L  + +T+  LI+  C+
Sbjct: 848  FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ 907

Query: 450  ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              +LN A++   ++    + P    YN ++D  C  G +++A V+V ++++ +   D +T
Sbjct: 908  AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967

Query: 510  FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            + I+I G C   ++ EA  +F  + R G   D I   ++IS L + G+  EA ++  R  
Sbjct: 968  YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027

Query: 570  ED 571
            ED
Sbjct: 1028 ED 1029



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 172/367 (46%), Gaps = 1/367 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A GL  +        S   +  +L A+ K N  D  +Y+F +   L    D ++F 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ILI    R      A      M   G  P IVT  +L++G C+ N       L+  +  +
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA-E 713

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               P+VV Y +VI+G CK   ++ A  I+  M   GI   AVT+N LI G    G    
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   M+     P+V+ F++LID + + G L +   L  EM  +++ PN+ T+  LIN
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C + RL DA+     +      P    YN +I GFCK+  V++   +  EM  +    
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  T+  LI G+C  G++  A  +FN+M+  G  PD +T N L+ CL   G   +A  ++
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953

Query: 566 QRASEDQ 572
           +   ++Q
Sbjct: 954 EDLQKNQ 960



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 167/346 (48%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           ++   + +  L++   + +    A+ +  +  +L   P   TF  L+ G      +  AF
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                M   G  P++V YNTLI  LC+  +V    ELL E++ K   + D+VTY ++++G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C  G+  +A  I  +M    I P   TF  LID F K GN+  A+ + ++ML     P+
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            VT++SLI+G C +G+L    K  D M  K   PNV T+  LIN  CK  R+ D  +  +
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQ 335

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++    LV   F YN +I G+C+ G +  A  I + M      PD +T  IL+ G C+ G
Sbjct: 336 RMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNG 395

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +  A+  FN M         +  N +I  L K     EA+ +  R
Sbjct: 396 EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCR 441



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 174/348 (50%), Gaps = 2/348 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   + SLL+    +N   +A  +     +   +P+   +N LI  L + G+V  A E  
Sbjct: 134 SIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELL 193

Query: 285 YDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
            +M   G  + D+VTYNTL++GLC   E  +   +L+++  K   +PDV T+T++I  + 
Sbjct: 194 NEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMT-KRRINPDVFTFTALIDAFV 252

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G +D+A  +Y +M    I P+ VT+N LI+G    G +  A+   + M S G  P+VV
Sbjct: 253 KQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVV 312

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+++LI+G+C++ ++  G+KL   M  + L  + +T+  LI+  C+  +L  A+     +
Sbjct: 313 TYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWM 372

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    +  ++ G C  G +  A V   +M         V + I+I G C   ++
Sbjct: 373 VSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKV 432

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            EA  +F ++   G  PD  T   +I  L K G   EA  + +R  ED
Sbjct: 433 EEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKED 480



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 164/337 (48%), Gaps = 7/337 (2%)

Query: 146  SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
            S   L L  +   YN V+  LC+    ++   +F  M   G + ++      +S    +G
Sbjct: 710  SMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769

Query: 206  KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
            +   A  LL      ++  +   + +L++  VK+ N  EA  ++KE  R    P+  T+N
Sbjct: 770  RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829

Query: 266  ILIQGL---SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
             LI G     R+G+ K  F+    M S GC PD+VTYNTLI+G C+   V  G +L  E+
Sbjct: 830  SLINGFCIQGRLGDAKHMFDL---MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 886

Query: 323  KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
              +     D  TY ++I GYC+ GK++ A  ++N M  CG+ P  VT+N+L+D     G 
Sbjct: 887  THQG-LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGK 945

Query: 383  MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
            +  A  M E +       D++T++ +I G CRN ++ +   L   +  K +  +   +  
Sbjct: 946  IEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYIT 1005

Query: 443  LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            +I+ LC+     +A +   ++K +  +P   +Y+  +
Sbjct: 1006 MISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 157/308 (50%), Gaps = 2/308 (0%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++A+ +F E  +    P    F  L+  ++ +   +    F   M  FG S D+ ++  L
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I   CR + ++    +L ++  K  + P +VT+ S++ G+C   ++  A  +   M   G
Sbjct: 107 IHCFCRCSRLSLALSILGKM-MKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQLNQG 421
            +P+ V +N LID   K G++  A  +   M   G L  D+VT+++L+ G C +G+  Q 
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            ++  +M  + ++P+V+TFT LI+A  K+  L++A+   KQ+  + + P    YN +I+G
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C  G +  A      M  K C P+ VT+  LI G C   R+ + + +F +M R G   D
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 542 DITVNSLI 549
             T N+LI
Sbjct: 346 TFTYNTLI 353



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 4/314 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
            YN ++  LC+ G  +    + + M   G L  + ++ +   ++    +G+   A  +L 
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLA-ADLVTYNTLLTGLCYSGEWRQAARILR 230

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                 +    F + +L++A VKQ N DEA  ++K+  +    P+T T+N LI GL   G
Sbjct: 231 DMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHG 290

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A + F  M S GC P++VTYNTLI+G C+   V  G +L + + ++     D  TY
Sbjct: 291 RLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM-YREGLVGDTFTY 349

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I GYC++GK+  A  I++ M SCG+ P  +T  +L+ G    G + SA      M S
Sbjct: 350 NTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRS 409

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                 +V ++ +I G C+  ++ +  +L   +  + + P+  T+TI+I  LCK     +
Sbjct: 410 GEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 469

Query: 456 ARRFLKQLKWNDLV 469
           A    +++K + ++
Sbjct: 470 ADELFRRMKEDGII 483



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 36/279 (12%)

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +S+  P VV +T +++    L + +       +M   GI     +F +LI  F +   + 
Sbjct: 58  QSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLS 117

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGY-------------------------------- 412
            A  +  +M+  GY P +VTF SL+ G+                                
Sbjct: 118 LALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLI 177

Query: 413 ---CRNGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
              C+NG +N  L+L +EM+ K  L+ ++ T+  L+  LC       A R L+ +    +
Sbjct: 178 DCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRI 237

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  F +  +ID F K GN+DEA  +  +M +    P+ VT+  LI G CM GR+  A  
Sbjct: 238 NPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKK 297

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            F+ M   GC P+ +T N+LI+   K     +  ++ QR
Sbjct: 298 TFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 111/467 (23%), Positives = 178/467 (38%), Gaps = 62/467 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQ 216
           TYN ++  LC  G     +  FD M S G  PN       ++   ++ +  D  K     
Sbjct: 278 TYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM 337

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           +R G V   TF YN+L++   +      A  +F         PD  T  IL+ GL   GE
Sbjct: 338 YREGLVG-DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE 396

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A   F DM S      IV YN +I GLC+ ++V    EL   +  +    PD  TYT
Sbjct: 397 IGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG-VKPDARTYT 455

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG---KVGNMVSAEYMRERM 393
            +I G CK G   +A  ++  M   GI   A   ++   G      +G ++     R  +
Sbjct: 456 IMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSI 515

Query: 394 LSFG----YLPDVVTFSSL-----------IDGYCRNGQL-------------------- 418
           +  G    Y  D   +SSL           + G+ R   L                    
Sbjct: 516 MESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHH 575

Query: 419 ---------------------NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
                                +    L  EM      P++  FT ++ A+ K N+ +   
Sbjct: 576 HHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVI 635

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +++   +    + +  +I  FC+      A  ++ +M +   +P  VT   L+ G 
Sbjct: 636 YLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGF 695

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C   R  EA+S+ + M  +G  P+ +  N++I+ L K    N A  I
Sbjct: 696 CQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEI 742



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 1/223 (0%)

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +G+    + + A  ++ EM      PS V F  L+     +    +  Y  ++M  FG  
Sbjct: 38  TGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGIS 97

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            D+ +F+ LI  +CR  +L+  L +  +M      P++ TF  L++  C  NR++DA   
Sbjct: 98  HDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSL 157

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK-RCKPDKVTFTILIIGHC 518
           +  +  +   P   +YN +ID  CK G+V+ A  ++ EME+K R   D VT+  L+ G C
Sbjct: 158 VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC 217

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             G   +A  I   M +    PD  T  +LI   +K G  +EA
Sbjct: 218 YSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEA 260



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 75/164 (45%)

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G+  + +    L L  EM      P+V  FT L+ A+    R      F +Q++   +  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
             + +  +I  FC+   +  A  I+ +M +    P  VTF  L+ G C++ R+ +A S+ 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
             M++ G  P+ +  N+LI CL K G  N A  ++    +   L
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRL 202


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 207/420 (49%), Gaps = 3/420 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +N+ +      Y  V+RSLCE+      + +   M + G   N       +    +  K 
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A G+       E+      Y +L+  L K    +  + M  E  RL   P     + L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++GL + G+V++A      +  FG SP+I  YN LI  LC+        ELL +   K  
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEA-ELLFDRMGKIG 397

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ VTY+ +I  +C+ GK+D A     EM   G+KPS   +N LI+G  K G++ +AE
Sbjct: 398 LCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAE 457

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M++    P VVT++SL+ GYC  G++N+ L+L  EM GK + P++YTFT L++ L
Sbjct: 458 SLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGL 517

Query: 448 CKENRLNDA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            +   + DA + F +  +WN + P    YN +I+G+C+ GN+ +A   + EM EK   PD
Sbjct: 518 FRAGLIRDAVKLFTEMAEWN-VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPD 576

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             ++  LI G C+ G+  EA    + + +  C  ++I    L+    + G   EA  + Q
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 213/439 (48%), Gaps = 36/439 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC++   +    + D M      P+   +   V    + GK + A  L+ + 
Sbjct: 299 TYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRV 358

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+ + F+YN+L+++L K  N DEA  +F    ++   P+  T++ILI    R G++
Sbjct: 359 AEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKL 418

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  F  +M   G  P +  YN+LI+G C+  +++    L+ E+    +  P VVTYTS
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEM-INKKLEPTVVTYTS 477

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC  GK++KA  +Y+EM   GI PS  TF  L+ G  + G +  A  +   M  + 
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VT++ +I+GYC  G +++  +  +EM  K + P+ Y++  LI+ LC   + ++A+
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI----------------------- 494
            F+  L   +       Y  ++ GFC+ G ++EA  +                       
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGS 657

Query: 495 ------------VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
                       + EM ++  KPD V +T +I      G   EA  I++ M+  GC P++
Sbjct: 658 LKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 543 ITVNSLISCLLKGGMPNEA 561
           +T  ++I+ L K G  NEA
Sbjct: 718 VTYTAVINGLCKAGFVNEA 736



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 230/460 (50%), Gaps = 19/460 (4%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGL--------------HDS 174
           +I  +D+PKLGL+F  F  ++   +HS  ++ +++ +L +  L                 
Sbjct: 77  LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALK 136

Query: 175 VQVVFDYMRS---DGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYN 230
              VFD + S      L +S   +  +   +R+ +  D             +       +
Sbjct: 137 PSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLS 196

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           +LL+ LVK  +   A+ +F +   +  +PD + +  +I+ L  + ++ +A E    M + 
Sbjct: 197 ALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEAT 256

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           GC  +IV YN LI GLC+  +V     + K++  K E  PDVVTY +++ G CK+ + + 
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-ELKPDVVTYCTLVCGLCKVQEFEV 315

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
              + +EM      PS    + L++G  K G +  A  + +R+  FG  P++  +++LID
Sbjct: 316 GLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALID 375

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
             C+    ++   L D M    L PN  T++ILI+  C+  +L+ A  FL ++    L P
Sbjct: 376 SLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
             + YN +I+G CK G++  A  ++AEM  K+ +P  VT+T L+ G+C KG++ +A+ ++
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++M   G  P   T  +L+S L + G+  +A ++    +E
Sbjct: 496 HEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAE 535



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 201/473 (42%), Gaps = 71/473 (15%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +++ L  S   YN ++   C+ G   + + +   M +    P        +      GK 
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  L  +     +  S + + +LL+ L +     +AV +F E      +P+  T+N++
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+G    G + KAFEF  +M   G  PD  +Y  LI GLC   + +     +  +  K  
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH-KGN 607

Query: 328 FSPDVVTYTSVISGYCKLGKMDKAT----------------------------------- 352
              + + YT ++ G+C+ GK+++A                                    
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFL 667

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+  EM+  G+KP  V +  +ID   K G+   A  + + M++ G +P+ VT++++I+G 
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPN-----------------------------------V 437
           C+ G +N+   LC +M+  N  PN                                    
Sbjct: 728 CKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANT 787

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+ +LI   C++ R+ +A   + ++  + + P    Y  +I   C+  +V +A  +   
Sbjct: 788 ATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNS 847

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           M EK  +PD+V +  LI G C+ G M +A  + N+MLR G  P+  T  + IS
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 207/433 (47%), Gaps = 1/433 (0%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           DN    ++ L    VN  +     T+N+++++LC+        ++ + M + G  P+   
Sbjct: 136 DNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEIT 195

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               +   I  G  + A  +  Q       ++      L+N   K+   +EA+    E  
Sbjct: 196 FTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVS 255

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
                PD  TFN L+ G  RIG V  A +    M   G  PD+ TYN+LISG+C++ E  
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFE 315

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
           +  E+L+++  + E SP+ VTY ++IS  CK  +++ AT +   + S G+ P   TFN L
Sbjct: 316 KAIEILQQMILR-ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTL 374

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G     N   A  M E M + G  PD  T+S LID  C   +L + L L  EM+    
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC 434

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           + N   +  LI+ LCK  R+ DA     Q++   +      YN +IDG CK   V+EA+ 
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ +M  +  KPDK T+  L+   C  G + +A  I   M   GC PD  T  +LI  L 
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554

Query: 554 KGGMPNEAFRIMQ 566
           + G  + A ++++
Sbjct: 555 RAGRVDVASKLLR 567



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 216/415 (52%), Gaps = 15/415 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
           YN+ + +L E      V+++   M ++G + +       + +  +A +   A  +L +  
Sbjct: 126 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 185

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
               +P E+T +T M        +++ + + A+ M K+           +  +L+ G  +
Sbjct: 186 NHGLKPDEITFTTLM-----QGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--FSPD 331
            G V++A  F  ++   G SPD VT+N+L++G CR+  V   ++ L  V F  E  F PD
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV---NDALDIVDFMIEKGFDPD 297

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TY S+ISG CKLG+ +KA  I  +M      P+ VT+N LI    K   + +A  +  
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            ++S G LPDV TF++LI G C +   +  +++ +EMK K   P+ +T++ILI++LC E 
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           RL +A   LK+++ +       +YN +IDG CK+  +++A  I  +ME        VT+ 
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            LI G C   R+ EA  + ++M+  G  PD  T NSL++   + G   +A  I+Q
Sbjct: 478 TLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQ 532



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 9/418 (2%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           +H       ++  L +    DS+  +   ++S G +PN+      + S     + +    
Sbjct: 52  HHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLK 111

Query: 213 LLSQ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           +L     F+P      T  YN  LNALV+ N       +  +        D  TFN+LI+
Sbjct: 112 ILENELGFKP-----DTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIK 166

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L +  +++ A     +M + G  PD +T+ TL+ G     ++    ++ K++       
Sbjct: 167 ALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLL 226

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            +V +   +++G+CK G++++A     E++  G  P  VTFN L++GF ++GN+  A  +
Sbjct: 227 TNV-SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDI 285

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + M+  G+ PDV T++SLI G C+ G+  + +++  +M  +  SPN  T+  LI+ALCK
Sbjct: 286 VDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCK 345

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           EN +  A    + L    L+P    +N +I G C + N D A  +  EM+ K CKPD+ T
Sbjct: 346 ENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFT 405

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++ILI   C + R+ EA+ +  +M   GCA + +  N+LI  L K     +A  I  +
Sbjct: 406 YSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 194/386 (50%), Gaps = 4/386 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N ++   C +G ++D++ +V D+M   G  P+       +S   + G+ + A  +L Q
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIV-DFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQ 323

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               E + +T  YN+L++AL K+N  + A  + +        PD  TFN LIQGL     
Sbjct: 324 MILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN 383

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A E F +M + GC PD  TY+ LI  LC    +     LLKE++  S  + + V Y 
Sbjct: 384 QDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME-SSGCARNAVVYN 442

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G CK  +++ A  I+++M   G+  S+VT+N LIDG  K   +  A  + ++M+  
Sbjct: 443 TLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME 502

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T++SL+  +CR G + +   +   M      P+++T+  LI  LC+  R++ A
Sbjct: 503 GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVA 562

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L+ ++   +V  P  YNPVI          E   +  EM EK   PD +T  I+  G
Sbjct: 563 SKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRG 622

Query: 517 HCMKGRMV-EAISIFNKMLRIGCAPD 541
            C  G  + EAI    +ML  G  P+
Sbjct: 623 LCNGGGPIQEAIDFTVEMLEKGILPE 648



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 206/430 (47%), Gaps = 15/430 (3%)

Query: 153 NHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NH  K    T+  +M+   E G  +    +   M   G L  +  ++  V+   + G+ +
Sbjct: 186 NHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVE 245

Query: 209 AAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            A   + +     F P +VT     +NSL+N   +  N ++A+ +          PD +T
Sbjct: 246 EALRFVLEVSEEGFSPDQVT-----FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N LI G+ ++GE +KA E    M    CSP+ VTYNTLIS LC+ NE+    +L + + 
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    PDV T+ ++I G C     D A  ++ EM + G KP   T+++LID       +
Sbjct: 361 SKG-LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + + M S G   + V +++LIDG C++ ++    ++ D+M+   +S +  T+  L
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK  R+ +A + + Q+    L P  F YN ++  FC+ G++++A  IV  M    C
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           +PD  T+  LI G C  GR+  A  +   +   G        N +I  L       E  R
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599

Query: 564 IMQRASEDQN 573
           + +   E  +
Sbjct: 600 LFREMMEKSD 609



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 20/313 (6%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY++++ SLC E  L +++ ++   M S G   N+ +    +    ++ + + A+ +  Q
Sbjct: 405 TYSILIDSLCYERRLKEAL-MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQ 463

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V+ S+  YN+L++ L K    +EA  +  +      +PD +T+N L+    R+G+
Sbjct: 464 MELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGD 523

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVTY 335
           ++KA +    M S GC PDI TY TLI GLCR   V    +LL+ V+ K    +P    Y
Sbjct: 524 IEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHA--Y 581

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS-AEYMRERML 394
             VI       +  +   ++ EM      P A+T  ++  G    G  +  A      ML
Sbjct: 582 NPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEML 641

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G LP+  +F  L +G C     +  ++L +               ++  A   E   +
Sbjct: 642 EKGILPEFPSFGFLAEGLCSLSMEDTLIELIN--------------MVMEKAQMSERETS 687

Query: 455 DARRFLKQLKWND 467
             R FLK  K+ND
Sbjct: 688 MIRGFLKIRKFND 700



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 2/187 (1%)

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
           S   + +++ S G +P+  TF++LI  +    ++   LK+ +   G    P+   + I +
Sbjct: 73  SITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELG--FKPDTNFYNIAL 130

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           NAL ++N+L        ++    +V     +N +I   CKA  +  A +++ EM     K
Sbjct: 131 NALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLK 190

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD++TFT L+ G   +G +  A+ +  +ML  GC   +++V  L++   K G   EA R 
Sbjct: 191 PDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRF 250

Query: 565 MQRASED 571
           +   SE+
Sbjct: 251 VLEVSEE 257



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 4/195 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C +G  +    +   M S+G  P+       +    RAG+ D A  LL   
Sbjct: 510 TYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSV 569

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL-SRIGE 276
           +   + ++   YN ++ AL  +    E + +F+E       PD  T  I+ +GL +  G 
Sbjct: 570 QMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGP 629

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A +F  +M   G  P+  ++  L  GLC ++      EL+  V  K++ S      T
Sbjct: 630 IQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSE---RET 686

Query: 337 SVISGYCKLGKMDKA 351
           S+I G+ K+ K + A
Sbjct: 687 SMIRGFLKIRKFNDA 701


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 199/416 (47%), Gaps = 1/416 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL ++H+  TY++++   C          V   M   G+ P+   +   ++      +  
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q         +F +N+L++ L + N A EAV +         QPD  T+ I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G++  A      M      P +V YNT+I  LC    V     L  E+  K   
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG-I 287

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+VVTY S+I   C  G+   A+ + ++M    I P+ VTF+ LID F K G +V AE 
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M+     PD+ T+SSLI+G+C + +L++   + + M  K+  PNV T+  LI   C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+++     +++    LV     Y  +I GF +A   D A ++  +M      PD +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T++IL+ G C  G++  A+ +F  + R    PD  T N +I  + K G   + + +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 215/428 (50%), Gaps = 14/428 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   ++ ++ ++ +M   D V  + + M++ G   N       ++   R  +   A  +L
Sbjct: 80  SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           ++     + P  VT+     NSLLN     N   +AV +  +   +  QPD++TFN LI 
Sbjct: 140 AKMMKLGYEPDIVTL-----NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL R     +A      M   GC PD+VTY  +++GLC+  ++     LLK+++ + +  
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME-QGKIE 253

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P VV Y ++I   C    ++ A  ++ EM++ GI+P+ VT+N LI      G    A  +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+     P+VVTFS+LID + + G+L +  KL DEM  +++ P+++T++ LIN  C 
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +RL++A+   + +   D  P    YN +I GFCKA  VDE   +  EM ++    + VT
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
           +T LI G         A  +F +M+  G  PD +T + L+  L   G    A   F  +Q
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493

Query: 567 RASEDQNL 574
           R+  + ++
Sbjct: 494 RSKMEPDI 501



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 207/443 (46%), Gaps = 37/443 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  L           + D M   G  P+       V+   + G  D A  LL + 
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY------------------------- 252
             G++     +YN++++AL    N ++A+ +F E                          
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307

Query: 253 ---FRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
               RL S        P+  TF+ LI    + G++ +A + + +M      PDI TY++L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+G C  + +     +  E+    +  P+VVTY ++I G+CK  ++D+   ++ EM+  G
Sbjct: 368 INGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  + VT+  LI GF +     +A+ + ++M+S G LPD++T+S L+DG C NG++   L
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + + ++   + P++YT+ I+I  +CK  ++ D       L    + P    Y  ++ GF
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+ G  +EA+ +  EM+E+   PD  T+  LI  H   G    +  +  +M       D 
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 606

Query: 543 ITVNSLISCLLKGGMPNEAFRIM 565
            T+  L++ +L  G  +++F  M
Sbjct: 607 STI-GLVTNMLHDGRLDKSFLKM 628



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 131/246 (53%)

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           KS   P +V ++ ++S   K+ K D    +  +M + GI  +  T+++LI+ F +   + 
Sbjct: 74  KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  +  +M+  GY PD+VT +SL++G+C   +++  + L  +M      P+ +TF  LI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           + L + NR ++A   + ++      P    Y  V++G CK G++D A  ++ +ME+ + +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P  V +  +I   C    + +A+++F +M   G  P+ +T NSLI CL   G  ++A R+
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313

Query: 565 MQRASE 570
           +    E
Sbjct: 314 LSDMIE 319



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 4/271 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S++    TY+ ++   C     D  + +F+ M S    PN       +    +A + D  
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +     +  +T  Y +L++   +    D A  +FK+       PD  T++IL+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L   G+V+ A   F  +      PDI TYN +I G+C+  +V  G +L   +  K    P
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKP 534

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN-MVSAEYM 389
           +VVTYT+++SG+C+ G  ++A  ++ EM   G  P + T+N LI    + G+   SAE +
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           RE M S  ++ D  T   L+     +G+L++
Sbjct: 595 RE-MRSCRFVGDASTI-GLVTNMLHDGRLDK 623



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 105/218 (48%)

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+D A  ++ +M      PS V F+ L+    K+        + E+M + G   ++ T+S
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LI+ +CR  QL+  L +  +M      P++ T   L+N  C  NR++DA   + Q+   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P  F +N +I G  +     EA  +V  M  K C+PD VT+ I++ G C +G +  A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +S+  KM +    P  +  N++I  L      N+A  +
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 451 NRLNDARRFLKQLKWNDLV-PKPF----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           NRLND +       + D+V  +PF     ++ ++    K    D    +  +M+      
Sbjct: 55  NRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 114

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +  T++ILI   C + ++  A+++  KM+++G  PD +T+NSL++    G   ++A  ++
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174

Query: 566 QRASE 570
            +  E
Sbjct: 175 GQMVE 179


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 185/352 (52%), Gaps = 3/352 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+LL+ L  ++   EA+ +F + F    +P+  TF  L+ GL R G + +A      M 
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P  +TY T++ G+C++ +     +LL++++  S   P+VV Y+++I   CK G+ 
Sbjct: 212 EDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRH 271

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  ++ EM   GI P   T+N +I GF   G    AE + + ML     PDVVT+++L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ + + G+  +  +L DEM  + + PN  T++ +I+  CK+NRL+ A      +     
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    +N +IDG+C A  +D+   ++ EM E     D  T+  LI G  + G +  A+ 
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           +  +M+  G  PD +T ++L+  L   G   +A   F++MQ++ +D +   P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 205/422 (48%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C++G   S   +   M    H+ PN  +    + S  + G+   A+ L ++
Sbjct: 221 TYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +    F YNS++          +A  + +E       PD  T+N LI    + G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TY+++I G C+ N +     +   +  K   SP+++T+ 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFN 399

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D    + +EM   G+     T+N LI GF  VG++ +A  + + M+S 
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-----------NLSPNVYTFTILIN 445
           G  PD+VT  +L+DG C NG+L   L++   M+              + P+V T+ ILI+
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +IDG CK   +DEA  +   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTFT LI G+C  GR+ + + +F +M R G   + IT  +LI    K G  N A  I 
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639

Query: 566 QR 567
           Q 
Sbjct: 640 QE 641



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 207/409 (50%), Gaps = 20/409 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGLL 214
           Y+ ++ SLC+ G H   Q +F  M+  G  P+    + MI  F SS    G+   A+ LL
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS----GRWSDAEQLL 313

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    +++     YN+L+NA VK+    EA  ++ E       P+T T++ +I G  + 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +  A   FY M + GCSP+++T+NTLI G C    +  G ELL E+  ++    D  T
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTT 432

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+  +G ++ A  +  EM S G+ P  VT + L+DG    G +  A  M + M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 395 SF-----------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                        G  PDV T++ LI G    G+  +  +L +EM  + + P+  T++ +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK++RL++A +    +      P    +  +I+G+CKAG VD+   +  EM  +  
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             + +T+  LI G    G +  A+ IF +M+  G  PD IT+ ++++ L
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 173/386 (44%), Gaps = 45/386 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +  + G     + ++D M   G +PN+      +    +  + DAA+ +    
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +   +N+L++        D+ + +  E        DT T+N LI G   +G++
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEF-------- 328
             A +   +M S G  PDIVT +TL+ GLC   ++    E+ K + K K +         
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 329 -SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TY  +ISG    GK  +A  +Y EM   GI P  +T++ +IDG  K   +  A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M + M S  + P+VVTF++LI+GYC+ G+++ GL+L  EM  + +  N  T+  LI   
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI--- 623

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C                                GF K GN++ A  I  EM      PD 
Sbjct: 624 C--------------------------------GFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
           +T   ++ G   K  +  A+++  K+
Sbjct: 652 ITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 2/270 (0%)

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L SG   +  +    +L  ++  +S   P VV +  ++    ++ + D    +Y +M   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDM-LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            I+    +F +LI  F     +  A     ++   G  PDVVTF++L+ G C   ++++ 
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L L  +M      PNV TFT L+N LC+E R+ +A   L ++  + L P    Y  ++DG
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 482 FCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            CK G+   A  ++ +MEE     P+ V ++ +I   C  GR  +A ++F +M   G  P
Sbjct: 229 MCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D  T NS+I      G  ++A +++Q   E
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 39/249 (15%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           DT    LC+     ++LE+ K +   K   K L+ S     +    +TYN+++  L   G
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK---KDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                + +++ M   G +P+                                   T  Y+
Sbjct: 526 KFLEAEELYEEMPHRGIVPD-----------------------------------TITYS 550

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           S+++ L KQ+  DEA  MF         P+  TF  LI G  + G V    E F +MG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   + +TY TLI G  +V  +    ++ +E+   S   PD +T  ++++G     ++ +
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEM-ISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 351 ATGIYNEMN 359
           A  +  ++ 
Sbjct: 670 AVAMLEKLQ 678



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 35/199 (17%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L  GF ++  +  A  +   ML    LP VV F  L+    R  + +  + L  +M+ K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  ++Y+FTILI   C  ++L                  PF  +         G + +  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKL------------------PFALSTF-------GKITKLG 144

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +           PD VTF  L+ G C++ R+ EA+++F++M    C P+ +T  +L++ L
Sbjct: 145 L----------HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194

Query: 553 LKGGMPNEAFRIMQRASED 571
            + G   EA  ++ R  ED
Sbjct: 195 CREGRIVEAVALLDRMMED 213


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 218/458 (47%), Gaps = 22/458 (4%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTY----NLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           ++PKL LKF +++   +   H+ ++Y    +LV R+      HD+V+ V    R D   P
Sbjct: 141 EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFP 200

Query: 190 -----------------NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
                             S + +   S  +  G  + A    S+ R           N L
Sbjct: 201 VCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL 260

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           L+ L K  N       F +       P  +T+N++I  L + G+++ +   F  M   G 
Sbjct: 261 LHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGL 320

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           SPD+VTYN+LI G  +V  +     L  E+K      PD++TY  +I+ YCK  KM +A 
Sbjct: 321 SPDVVTYNSLIDGYGKVGSLEEVASLFNEMK-DVGCVPDIITYNGLINCYCKFEKMPRAF 379

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
             ++EM + G+KP+ VT++ LID F K G M  A  +   M   G LP+  T++SLID  
Sbjct: 380 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDAN 439

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G L +  KL ++M    +  N+ T+T L++ LCK  R+ +A    + +  + + P  
Sbjct: 440 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            +Y  ++ G+ KA  +++A  I+ +M E   KPD + +  +I GHC + ++ E   I  +
Sbjct: 500 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 559

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           M   G + + +   ++I    K G  ++A    Q   +
Sbjct: 560 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 597



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 201/400 (50%), Gaps = 1/400 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            ++++     E+GL +     F  MR+   LP +    F +    ++G     +   +  
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S F YN +++ L K+ + + +  +F +   +   PD  T+N LI G  ++G +
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++    F +M   GC PDI+TYN LI+  C+  ++ R  E   E+K  +   P+VVTY++
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK-NNGLKPNVVTYST 399

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK G M  A  ++ +M   G+ P+  T+  LID   K GN+  A  +   ML  G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++VT+++L+DG C+ G++ +  ++   M    +SPN   +T L++   K  R+ DA 
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + LKQ+   ++ P   +Y  +I G C    ++E  +I+ EM+ +    + V  T +I  +
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 579

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
              G+  +A++ F +M  +G     +T   LI  L K G+
Sbjct: 580 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGI 619



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 194/426 (45%), Gaps = 7/426 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+          F  M+++G  PN       + +  + G    A  L    
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + F Y SL++A  K  N  EA  +  +  +   + +  T+  L+ GL + G +
Sbjct: 421 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 480

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F  M   G SP+   Y  L+ G  +   +    ++LK++  +    PD++ Y S
Sbjct: 481 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT-ECNIKPDLILYGS 539

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C   K+++   I  EM S GI  + V    +ID + K G    A    + M   G
Sbjct: 540 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               +VT+  LIDG C+ G +   +     M    L PNV  +T LI+ LCK N +  A+
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAK 659

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   +++   + P    +  +IDG  K GN+ EA V+++ M E   + D   +T L+ G 
Sbjct: 660 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 719

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---MQRA---SED 571
              G + +A   FN+M+  G  P+++    L+    K G  +EA  +   M+R    +E 
Sbjct: 720 SQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITES 779

Query: 572 QNLQLP 577
             +Q P
Sbjct: 780 ATMQFP 785


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 231/486 (47%), Gaps = 44/486 (9%)

Query: 119 EKLSPLNSLEVIKRLDNPK---LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
           EK S L   +V+KRL +     L L++ +    + S  H+  TY +++  L      D V
Sbjct: 36  EKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCV 95

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
           Q +   M+ +G   +  +    + S  RAG  + A     + +   V  +  +YN +L+A
Sbjct: 96  QYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDA 155

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L+ +N       ++    +   +P+ +T+NIL++ L +   V  A +   +M S GC PD
Sbjct: 156 LLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPD 215

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
            V+Y TLIS LC++ +V    EL         F+P V  Y ++I+G CK    ++A  + 
Sbjct: 216 EVSYTTLISSLCKLGKVKEAREL------AMSFTPSVPVYNALINGVCKEYTFEEAFQLL 269

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +EM + GI P+ +++  +I+     GN+  +  +  +M + G  P++ TF+SLI G+   
Sbjct: 270 DEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLK 329

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G  ++ L   D M  + + PNV  +  L++ LC +  L DA     Q++ N   P    Y
Sbjct: 330 GGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTY 389

Query: 476 NPVIDGFCKAGNVD-----------------------------------EANVIVAEMEE 500
           + +IDG+ KAG++D                                   +A  ++  M+ 
Sbjct: 390 SALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQV 449

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           + C P+ VTF   I G C  GR+  AI +F++M   GC P+  T N L+  LLK     E
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509

Query: 561 AFRIMQ 566
           AF +++
Sbjct: 510 AFGLVK 515



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 203/416 (48%), Gaps = 14/416 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++++LC+    D    +   M S G  P+       +SS  + GK   A+ L   F
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF 242

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P     S  +YN+L+N + K+   +EA  +  E       P+  ++  +I  LS  G V
Sbjct: 243 TP-----SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNV 297

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG--HELLK--EVKFKSEFSPDVV 333
           + +      M + GCSP++ T+ +LI G        +G  HE L   +   +    P+VV
Sbjct: 298 ELSLAVLAKMFARGCSPNLHTFTSLIKGF-----FLKGGSHEALDFWDRMIREGVVPNVV 352

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y +++ G C    +  A  ++N+M   G  P+  T++ LIDG+ K G++  A  +   M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           ++ G  P+VV ++ ++D  CRN   NQ   L + M+ +N  PN  TF   I  LC   R+
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRV 472

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A +   Q+  +   P    YN ++D   K     EA  +V +ME +  + + VT+  +
Sbjct: 473 DWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTI 532

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           I G+C  G + EA+ +  KM+  G  PD ITVN +I    K G  N A ++M R S
Sbjct: 533 IYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLS 588



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 3/304 (0%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            YN +M  LC +  L D+V V F+ M  +G  PN       +    +AG  D A  + + 
Sbjct: 353 AYNALMHGLCSKRSLGDAVSV-FNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y  +++ L + +  ++A  + +        P+T TFN  I+GL   G 
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A + F  MG+ GC P+  TYN L+  L +         L+K+++ +     ++VTY 
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG-IELNLVTYN 530

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC  G + +A  +  +M   G KP A+T N++ID + K G +  A  + +R+ + 
Sbjct: 531 TIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAG 590

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            + PD++ ++SLI G C +  + + +     M  + +SPNV T+ +L+  L      + A
Sbjct: 591 KWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGA 650

Query: 457 RRFL 460
            +FL
Sbjct: 651 VQFL 654



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 3/275 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TY+ ++    + G  D    V+++M + G  PN       V    R    + A  L+  
Sbjct: 387 RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIEN 446

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +      +T  +N+ +  L      D A+ +F +       P+T T+N L+  L +   
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +AF    DM   G   ++VTYNT+I G C    +    ELL ++  +    PD +T  
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT-KPDAITVN 565

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF-GKVGNMVSAEYMRERMLS 395
            VI  YCK GK++ A  + + +++    P  + +  LI G    +G   +  Y+R RMLS
Sbjct: 566 IVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLR-RMLS 624

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
            G  P+V T++ L+     N   +  ++  D + G
Sbjct: 625 EGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLG 659



 Score = 40.4 bits (93), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 59/131 (45%)

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ ++I  L  E  ++  +  L+Q+K   +     ++  VI  + +AG+ ++A      M
Sbjct: 78  TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           ++ R KP    +  ++     + R      I++ M + G  P+  T N L+  L K    
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197

Query: 559 NEAFRIMQRAS 569
           + A +++   S
Sbjct: 198 DGAHKLLVEMS 208


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 201/416 (48%), Gaps = 1/416 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL +++   +YN+++   C          V   M   G+ P+   +   ++    + +  
Sbjct: 108 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRIS 167

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q         T  +N+L++ L   N A EAV +  +  +   QPD  T+  ++
Sbjct: 168 DAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVV 227

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G++  A      M       D+V YNT+I GLC+   +     L  +++ K   
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG-I 286

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV TY S+IS  C  G+   A+ + + M    I P+ VTF+ LID F K G +V AE 
Sbjct: 287 RPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M+     PD+ T+SSLI+G+C + +L++   + + M  K+  PNV T+  LI   C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+ +     +++    LV     YN +I G  +AG+ D A  I  +M      PD +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T++IL+ G C  G++ +A+ +F  + +    PD  T N +I  + K G   + + +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 182/350 (52%), Gaps = 6/350 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+S     SLLN         +AV +  +   +  +PDT TFN LI GL    +
Sbjct: 146 YEPDIVTLS-----SLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M   GC PD+VTY  +++GLC+  ++     LLK+++ K +   DVV Y 
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYN 259

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G CK   +D A  ++N+M + GI+P   T+N LI      G    A  +   M+  
Sbjct: 260 TIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER 319

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+VVTFS+LID + + G+L +  KL DEM  +++ P+++T++ LIN  C  +RL++A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +   + +   D  P    YN +I GFCKA  V+E   +  EM ++    + VT+  LI G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               G    A  IF KM+  G  PD IT + L+  L K G   +A  + +
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 207/404 (51%), Gaps = 2/404 (0%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           + D+V +V D M   G+ P++      +       K   A  L+ Q            Y 
Sbjct: 166 ISDAVALV-DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 224

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           +++N L K+ + D A+ + K+  +   + D   +N +I GL +   +  AF  F  M + 
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK 284

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  PD+ TYN+LIS LC     +    LL  +  + + +P+VVT++++I  + K GK+ +
Sbjct: 285 GIRPDVFTYNSLISCLCNYGRWSDASRLLSNM-IERKINPNVVTFSALIDAFVKEGKLVE 343

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +Y+EM    I P   T++ LI+GF     +  A++M E M+S    P+VVT+++LI 
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G+C+  ++ +G++L  EM  + L  N  T+  LI  L +    + A++  K++  + + P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y+ ++DG CK G +++A V+   +++ + +PD  T+ I+I G C  G++ +   +F
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
             +   G  P+ I   ++IS   + G+  EA  + +   ED  L
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 205/409 (50%), Gaps = 6/409 (1%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +L  + L D++ +  + ++S    P   ++EF   +S+  +  K D    L  + +   +
Sbjct: 55  ALLNLKLDDAIGLFGEMVQSR---PLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRI 111

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
           +   + YN L+N   +++    A+ +  +  +L  +PD  T + L+ G      +  A  
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 171

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
               M   G  PD VT+NTLI GL   N+ +    L+ ++  +    PD+VTY +V++G 
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGAVVNGL 230

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           CK G +D A  +  +M    I+   V +N +IDG  K  ++  A  +  +M + G  PDV
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDV 290

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
            T++SLI   C  G+ +   +L   M  + ++PNV TF+ LI+A  KE +L +A +   +
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    + P  F Y+ +I+GFC    +DEA  +   M  K C P+ VT+  LI G C   R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + E + +F +M + G   + +T N+LI  L + G  + A +I ++   D
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 195/411 (47%), Gaps = 7/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+ G  D    +   M       +  +    +    +    D A  L ++ 
Sbjct: 222 TYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM 281

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YNSL++ L       +A  +          P+  TF+ LI    + G++
Sbjct: 282 ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKL 341

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVT 334
            +A + + +M      PDI TY++LI+G C   R++E     EL+       +  P+VVT
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM----ISKDCFPNVVT 397

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+CK  ++++   ++ EM+  G+  + VT+N LI G  + G+   A+ + ++M+
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G  PD++T+S L+DG C+ G+L + L + + ++   + P++YT+ I+I  +CK  ++ 
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           D       L    + P   +Y  +I GFC+ G  +EA+ +  EM+E    PD   +  LI
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 577

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                 G    +  +  +M   G   D  T++ +I+ L  G +      ++
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 2/273 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +  S++    TY+ ++   C     D  + +F+ M S    PN       +    +A + 
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +    L  +     +  +T  YN+L+  L +  + D A  +FK+       PD  T++IL
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G+++KA   F  +      PDI TYN +I G+C+  +V  G +L   +  K  
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG- 530

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+V+ YT++ISG+C+ G  ++A  ++ EM   G  P +  +N LI    + G+  ++ 
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 590

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            + + M S G++ D  T S +I+    +G+L +
Sbjct: 591 ELIKEMRSCGFVGDASTISMVIN-MLHDGRLEK 622


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 192/361 (53%), Gaps = 5/361 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +Y  ++  +C++G  D+   +    + DG L  PN  M    + +  +      A GL S
Sbjct: 166 SYGTLINGVCKIG--DTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFS 223

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     ++     Y++L+     +    EA+ +  E       P+ +T+NIL+  L + G
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +VK+A      M      PD++TY+TL+ G   V EV +   +   +      +PDV TY
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG-VTPDVHTY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I+G+CK   +D+A  ++ EM+   + P  VT++ LIDG  K G +     + + M  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHD 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   +V+T+SSLIDG C+NG L++ + L ++MK + + PN +TFTIL++ LCK  RL D
Sbjct: 403 RGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKD 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+   + L         + YN +IDG CK G ++EA  ++++ME+  C PD VTF I+II
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIII 522

Query: 516 G 516
            
Sbjct: 523 A 523



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 215/425 (50%), Gaps = 4/425 (0%)

Query: 144 EFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           +F+R+ L + H+     +N ++ S  +M  + +   +   +   G  P+   +   ++  
Sbjct: 46  QFNRM-LCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCF 104

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G+      +L++         T   N+L+  L  +    +A++   +      Q + 
Sbjct: 105 CHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            ++  LI G+ +IG+ + A +    +      P++V Y+T+I  LC+   V+  + L  E
Sbjct: 165 VSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSE 224

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K   S DVVTY+++I G+C  GK+ +A G+ NEM    I P+  T+N+L+D   K G
Sbjct: 225 MTVKG-ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ +   ML     PDV+T+S+L+DGY    ++ +   + + M    ++P+V+T+T
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           ILIN  CK   +++A    K++   ++VP    Y+ +IDG CK+G +     ++ EM ++
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDR 403

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               + +T++ LI G C  G +  AI++FNKM   G  P+  T   L+  L KGG   +A
Sbjct: 404 GQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 463

Query: 562 FRIMQ 566
             + Q
Sbjct: 464 QEVFQ 468



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +++ LC  G         D + + G   N       ++   + G   AA  LL + 
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKI 190

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  MY+++++AL K     EA  +F E        D  T++ LI G    G++
Sbjct: 191 DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A     +M     +P++ TYN L+  LC+  +V     +L  V  K+   PDV+TY++
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA-VMLKACVKPDVITYST 309

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY  + ++ KA  ++N M+  G+ P   T+ +LI+GF K   +  A  + + M    
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P +VT+SSLIDG C++G++     L DEM  +    NV T++ LI+ LCK   L+ A 
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAI 429

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++K   + P  F +  ++DG CK G + +A  +  ++  K    +  T+ ++I GH
Sbjct: 430 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGH 489

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           C +G + EA+++ +KM   GC PD +T   +I  L K
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 209/419 (49%), Gaps = 11/419 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY-----MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           T N+++   C MG     Q+ F +     +   G+ P++  +   +      G+   A  
Sbjct: 96  TLNILINCFCHMG-----QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              +       ++   Y +L+N + K  +   A+ + ++     ++P+   ++ +I  L 
Sbjct: 151 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALC 210

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   V +A+  F +M   G S D+VTY+TLI G C   ++     LL E+  K+  +P+V
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT-INPNV 269

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  ++   CK GK+ +A  +   M    +KP  +T++ L+DG+  V  +  A+++   
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PDV T++ LI+G+C+N  +++ L L  EM  KN+ P + T++ LI+ LCK  R
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +      + ++           Y+ +IDG CK G++D A  +  +M+++  +P+  TFTI
Sbjct: 390 IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI 449

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           L+ G C  GR+ +A  +F  +L  G   +  T N +I    K G+  EA  ++ +  ++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDN 508



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 180/388 (46%), Gaps = 37/388 (9%)

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
           T     +N +L++  K  +   AV +         QPD  T NILI     +G++   F 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
               +   G  PD VT NTLI GLC   +V +      ++     F  + V+Y ++I+G 
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL-LAQGFQLNQVSYGTLINGV 174

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           CK+G    A  +  +++    KP+ V ++ +ID   K   +  A  +   M   G   DV
Sbjct: 175 CKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK- 461
           VT+S+LI G+C  G+L + + L +EM  K ++PNVYT+ IL++ALCKE ++ +A+  L  
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294

Query: 462 -----------------------------QLKWNDL-----VPKPFMYNPVIDGFCKAGN 487
                                        Q  +N +      P    Y  +I+GFCK   
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           VDEA  +  EM +K   P  VT++ LI G C  GR+     + ++M   G   + IT +S
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414

Query: 548 LISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           LI  L K G  + A  +  +  +DQ ++
Sbjct: 415 LIDGLCKNGHLDRAIALFNKM-KDQGIR 441



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 139/264 (52%), Gaps = 1/264 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       V +  + GK   AK +L+      V      Y++L++         +A ++
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F     +   PD  T+ ILI G  +   V +A   F +M      P IVTY++LI GLC+
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              +    +L+ E+  + +   +V+TY+S+I G CK G +D+A  ++N+M   GI+P+  
Sbjct: 387 SGRIPYVWDLIDEMHDRGQ-PANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTF 445

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           TF +L+DG  K G +  A+ + + +L+ GY  +V T++ +IDG+C+ G L + L +  +M
Sbjct: 446 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKM 505

Query: 429 KGKNLSPNVYTFTILINALCKENR 452
           +     P+  TF I+I AL K++ 
Sbjct: 506 EDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 127/226 (56%), Gaps = 3/226 (1%)

Query: 291  GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
            G  PD+ T N LI+  C + ++     +L ++  K  + PD +T+T++I+G C  G+++K
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKI-LKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 351  ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
            A   ++++ + G + + V++  LI+G  K+G+  +A  +  ++      PDVV ++++ID
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 411  GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
              C++  +++   L  EM  K +S +V T+  LI   C   +L +A   L ++    + P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 471  KPFMYNPVIDGFCKAGN--VDEANVIVAEMEEKRCKPDKVTFTILI 514
                YN ++D  CK G   +DE+  ++++ME+  CK + VTF I+I
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 2/223 (0%)

Query: 351  ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
            A  + + +   GI+P   T N+LI+ F  +G +     +  ++L  GY PD +TF++LI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 411  GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
            G C  GQ+N+ L   D++  +    N  ++  LIN +CK      A + L+++      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 471  KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               MYN +ID  CK   V +A  +  EM  K    D VT+  LI G C+ G++ EAI + 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 531  NKMLRIGCAPDDITVNSLISCLLKGG--MPNEAFRIMQRASED 571
            NKM+     P+  T N L+  L K G  + +E+  ++ +  ++
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDN 1167



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 118/229 (51%), Gaps = 2/229 (0%)

Query: 328  FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              PD+ T   +I+ +C +G++     I  ++   G  P  +TF  LI+G    G +  A 
Sbjct: 957  IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016

Query: 388  YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +++L+ G+  + V++ +LI+G C+ G     +KL  ++ G+   P+V  +  +I+AL
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076

Query: 448  CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            CK   ++ A     ++    +      YN +I GFC  G + EA  ++ +M  K   P+ 
Sbjct: 1077 CKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNV 1136

Query: 508  VTFTILIIGHCMKGR--MVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             T+ IL+   C +G+  + E++S+ +KM   GC  + +T   +IS L +
Sbjct: 1137 RTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFE 1185



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 119/249 (47%), Gaps = 13/249 (5%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDY-----MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
            T N+++   C MG     Q+ F++     +   G+ P++      ++     G+ + A  
Sbjct: 963  TLNILINCFCHMG-----QITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALH 1017

Query: 213  LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               +       ++   Y +L+N + K  +   A+ + ++     ++PD   +N +I  L 
Sbjct: 1018 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALC 1077

Query: 273  RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            +   V KA+  F++M   G S D+VTYNTLI G C V ++     LL ++  K+  +P+V
Sbjct: 1078 KHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT-INPNV 1136

Query: 333  VTYTSVISGYCKLGK--MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
             TY  ++   CK GK  +D++  + ++M   G K +AVTF ++I    +       E + 
Sbjct: 1137 RTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLL 1196

Query: 391  ERMLSFGYL 399
              M++ G L
Sbjct: 1197 HEMIARGLL 1205



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 69/154 (44%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+ G    V  + D M   G   N       +    + G  D A  L ++ 
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM 435

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  +TF +  LL+ L K     +A  +F++        + +T+N++I G  + G +
Sbjct: 436 KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLL 495

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           ++A      M   GC PD VT+  +I  L + +E
Sbjct: 496 EEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 1/406 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+M   D    V D MRS    P++      + S    GK D A  +L Q  
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   Y  L+ A + +   DEA+ +  E      +PD +T+N +I+G+ + G V 
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AFE   ++   GC PD+++YN L+  L    +   G +L+ ++ F  +  P+VVTY+ +
Sbjct: 277 RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM-FSEKCDPNVVTYSIL 335

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+  C+ GK+++A  +   M   G+ P A +++ LI  F + G +  A    E M+S G 
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LPD+V +++++   C+NG+ +Q L++  ++     SPN  ++  + +AL        A  
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 455

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            + ++  N + P    YN +I   C+ G VD+A  ++ +M      P  VT+ I+++G C
Sbjct: 456 MILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC 515

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              R+ +AI + + M+  GC P++ T   LI  +   G   EA  +
Sbjct: 516 KAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 173/339 (51%), Gaps = 1/339 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F YN+L+N   K N  D+A  +          PDT T+NI+I  L   G++  A +    
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + S  C P ++TY  LI        V    +LL E+       PD+ TY ++I G CK G
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEM-LSRGLKPDMFTYNTIIRGMCKEG 273

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +D+A  +   +   G +P  +++N+L+      G     E +  +M S    P+VVT+S
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LI   CR+G++ + + L   MK K L+P+ Y++  LI A C+E RL+ A  FL+ +  +
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             +P    YN V+   CK G  D+A  I  ++ E  C P+  ++  +       G  + A
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 453

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + +  +M+  G  PD+IT NS+ISCL + GM ++AF ++
Sbjct: 454 LHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELL 492



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 160/336 (47%), Gaps = 43/336 (12%)

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---LCRVNEVARGHELLKEVKFKSEFS 329
           R G   ++      M   G +PD++    LI G   L  V +  R  E+L+  KF     
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILE--KFGQ--- 151

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV  Y ++I+G+CK+ ++D AT + + M S    P  VT+N++I      G +  A  +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            +++LS    P V+T++ LI+     G +++ LKL DEM  + L P+++T+  +I  +CK
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 450 ENRLNDA-----------------------RRFLKQLKWND---LVPKPF---------M 474
           E  ++ A                       R  L Q KW +   L+ K F          
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +I   C+ G ++EA  ++  M+EK   PD  ++  LI   C +GR+  AI     M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             GC PD +  N++++ L K G  ++A  I  +  E
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 427



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 1/225 (0%)

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C+ G   ++  +   M   G  P  +    LI GF  + N+  A  + E +  FG  PDV
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDV 154

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
             +++LI+G+C+  +++   ++ D M+ K+ SP+  T+ I+I +LC   +L+ A + L Q
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           L  ++  P    Y  +I+     G VDEA  ++ EM  +  KPD  T+  +I G C +G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  A  +   +   GC PD I+ N L+  LL  G   E  ++M +
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 319


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 223/458 (48%), Gaps = 3/458 (0%)

Query: 113 CARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH 172
           CAR+  +  + L  L  ++R+  P   +  L ++  N+ +   F  ++ +  +L E+G+ 
Sbjct: 144 CARFYSDANAVLKELICLRRV-LPSWDVFDLLWATRNVCVP-GFGVFDALFSALIELGML 201

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           +     F  MR     P        +    + G+ D ++          +  S F YN +
Sbjct: 202 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 261

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++ L K+ + + A  +F +       PD  T+N LI G  ++G + +    F  M    C
Sbjct: 262 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 321

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PD++TYN LI+  C+   + +  E L E+K  +   P+VVTY++ I  +CK G + +A 
Sbjct: 322 DPDVITYNALINCFCKFERMPKAFEFLHEMK-ANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
             + +M    + P+  T+  LID   K GN+  A  + E +L  G   +VVT+++L+DG 
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C  G++ +  ++   M    ++PN  T+T L++   K   +  A+  LK++K   + P  
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            +Y  ++ G C    ++EA +++ E++E     + V +T L+  +   G+  EA+++  +
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ML +G    ++T  +LI  L K G+  EA     R SE
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSE 598



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 228/466 (48%), Gaps = 20/466 (4%)

Query: 121 LSPLNSLEVIKRL-DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL-CEMGLHDSVQV- 177
           L+P+ +  V+  L  + +L L+F E+++  +   H+ + Y +++  L C     D+  V 
Sbjct: 96  LAPIWASRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVL 155

Query: 178 --------------VFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
                         VFD + +  ++  P   + +   S+ I  G  + A     + R   
Sbjct: 156 KELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFR 215

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V       N+LL+ L K    D +   FK+      +   +T+NI+I  L + G+++ A 
Sbjct: 216 VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMAR 275

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             F  M   G +PDIVTYN+LI G  ++  +     + +++K  ++  PDV+TY ++I+ 
Sbjct: 276 SLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK-DADCDPDVITYNALINC 334

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +CK  +M KA    +EM + G+KP+ VT++  ID F K G +  A      M      P+
Sbjct: 335 FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPN 394

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T++SLID  C+ G L + LKL +E+    +  NV T+T L++ LC+E R+ +A    +
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +    + P    Y  ++ GF KA  ++ A  I+ EM+EK  KPD + +  ++ G C + 
Sbjct: 455 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNES 514

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           R+ EA  +  ++   G   + +   +L+    K G   EA  +++ 
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 195/407 (47%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+             M+++G  PN      F+ +  + G    A       
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +T + F Y SL++A  K  N  EA+ + +E  +   + +  T+  L+ GL   G +
Sbjct: 387 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E F  M + G +P+  TY  L+ G  +  E+    ++LKE+K K    PD++ Y +
Sbjct: 447 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLLLYGT 505

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C   ++++A  +  E+   GI  +AV +  L+D + K G    A  + E ML  G
Sbjct: 506 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLG 565

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +   VT+ +LIDG C++G + + +     M    L PNV  +T L++ LCK N    A+
Sbjct: 566 LIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAK 625

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    ++P    Y  +IDG  K GN+ EA  +   M E   + D   +T LI G 
Sbjct: 626 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 685

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              G++ +A ++ ++M+  G  PD++    LI      G  +EA  +
Sbjct: 686 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALEL 732



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 215/447 (48%), Gaps = 21/447 (4%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++ N ++  L ++G  D  +  F  M + G   +       +    + G  + A+ L +Q
Sbjct: 221 RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQ 280

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +    T     YNSL++   K    DE + +F++       PD  T+N LI    +   
Sbjct: 281 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 340

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + KAFEF ++M + G  P++VTY+T I   C+   +    +   +++ +   +P+  TYT
Sbjct: 341 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR-RVALTPNEFTYT 399

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I   CK G + +A  +  E+   GIK + VT+  L+DG  + G M  AE +   ML+ 
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+  T+++L+ G+ +  ++     +  EMK K + P++  +  ++  LC E+RL +A
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +  + ++K + +     +Y  ++D + K+G   EA  ++ EM +      +VT+  LI G
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDG 579

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL-----------------KGGMPN 559
            C  G + EA+  F +M  IG  P+     +L+  L                  KG MP+
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639

Query: 560 EAFRIMQRASEDQNLQLPSWKKAVPLR 586
              +I   A  D N++  + ++A+ LR
Sbjct: 640 ---KIAYTALIDGNMKHGNLQEALNLR 663



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 196/419 (46%), Gaps = 1/419 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +  S  TYN+++  LC+ G  +  + +F  M+  G  P+       +    + G  D   
Sbjct: 251 IKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECI 310

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +  Q +  +       YN+L+N   K     +A     E      +P+  T++  I   
Sbjct: 311 CIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAF 370

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G +++A +FF DM     +P+  TY +LI   C+   +A   +L++E+  ++    +
Sbjct: 371 CKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI-LQAGIKLN 429

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTYT+++ G C+ G+M +A  ++  M + G+ P+  T+  L+ GF K   M  A+ + +
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M      PD++ + +++ G C   +L +   L  E+K   ++ N   +T L++A  K  
Sbjct: 490 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 549

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +  +A   L+++    L+     Y  +IDG CK+G V EA      M E   +P+   +T
Sbjct: 550 QATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYT 609

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            L+ G C       A  +F++ML  G  PD I   +LI   +K G   EA  +  R  E
Sbjct: 610 ALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIE 668



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 174/400 (43%), Gaps = 36/400 (9%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           PK   +FL   + N  L  +  TY+  + + C+ G+       F  MR     PN     
Sbjct: 342 PK-AFEFLHEMKAN-GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + +  +AG    A  L+ +     + ++   Y +LL+ L ++    EA  +F+     
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P+  T+  L+ G  +  E++ A +   +M      PD++ Y T++ GLC  + +   
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519

Query: 316 HELLKEVK------------------FKSEFSPDV----------------VTYTSVISG 341
             L+ E+K                  FKS  + +                 VTY ++I G
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDG 579

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            CK G + +A   +  M+  G++P+   +  L+DG  K      A+ + + ML  G +PD
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            + +++LIDG  ++G L + L L D M    +  +++ +T LI  L    ++  AR  L 
Sbjct: 640 KIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLD 699

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           ++    ++P   +Y  +I  +   G VDEA  +  EM ++
Sbjct: 700 EMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKR 739



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 132/311 (42%), Gaps = 36/311 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LCE G     + VF  M + G  PN       V   I+A + + AK +L + 
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491

Query: 218 RP------------------------------GEVTMS-----TFMYNSLLNALVKQNNA 242
           +                               GE+  S       +Y +L++A  K   A
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            EA+ + +E   L       T+  LI GL + G V++A   F  M   G  P++  Y  L
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + GLC+ N      +L  E+  K    PD + YT++I G  K G + +A  + + M   G
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKG-MMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++     +  LI G    G +  A  + + M+  G LPD V +  LI  Y   G++++ L
Sbjct: 671 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730

Query: 423 KLCDEMKGKNL 433
           +L +EM  + +
Sbjct: 731 ELQNEMAKRGM 741


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 201/432 (46%), Gaps = 36/432 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LCE+G  D    +F  MR D   P        V +   +G+   A  L S+ 
Sbjct: 41  SYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEM 100

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R      +   Y  ++NA+ K+   +E   +  E       P   T+N LI G  + G V
Sbjct: 101 RERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMV 160

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E    M S  C+P+  TYN LI G CR   V R   LL ++  +S  +P VVTY S
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM-LESRLTPSVVTYNS 219

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV------------------------- 372
           +I G CK+G +D A  + N MN  G+ P   T++V                         
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279

Query: 373 ----------LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                     LIDG+ K G M  A  + +RML+   LP+  T+++LIDG C+  ++ + L
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEAL 339

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L + M  K L   V T+TILI A+ KE   + A R L Q+  +   P  ++Y   I  F
Sbjct: 340 LLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAF 399

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  GN+ EA  +++ M E+   PD +T+T++I  +   G +  A  +  +M   GC P  
Sbjct: 400 CTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSH 459

Query: 543 ITVNSLISCLLK 554
            T + LI  LLK
Sbjct: 460 HTYSCLIKHLLK 471



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 178/339 (52%), Gaps = 1/339 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y +L++ L +    DE + +FK+       P   T+ +++  L   G   +A   F +M 
Sbjct: 42  YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             GC P+I TY  +I+ +C+  ++  G  +L E+  K    P V TY ++I GYCK G +
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG-LVPSVPTYNALIDGYCKEGMV 160

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A  I + M+S    P+  T+N LI GF +  N+  A  +  +ML     P VVT++SL
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G C+ G L+   +L + M    + P+ +T+++ I+ LCK+ R+ +A      LK   +
Sbjct: 221 IHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                +Y  +IDG+CKAG +D+AN ++  M  + C P+  T+  LI G C + ++ EA+ 
Sbjct: 281 KANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALL 340

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   M++ G      T   LI  +LK G  + A RI+ +
Sbjct: 341 LMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 171/327 (52%), Gaps = 1/327 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N+ + A  +F    +   + +  ++  LI GL  +G V +    F  M    C P + TY
Sbjct: 18  NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
             ++  L           L  E++ +    P++ TYT +I+  CK  K+++   I +EM 
Sbjct: 78  TVIVHALFESGRRMEAINLFSEMRERG-CEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G+ PS  T+N LIDG+ K G + +A+ + + M S    P+  T++ LI G+CR   ++
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + + L  +M    L+P+V T+  LI+  CK   L+ A R L  +  N +VP  + Y+  I
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G ++EANV+   ++EK  K ++V +T LI G+C  G+M +A S+ ++ML   C 
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
           P+  T N+LI  L K     EA  +M+
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLME 343



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 182/393 (46%), Gaps = 1/393 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VF+ M   G   N       +      G+ D    +  + R  +   +   Y  +++AL 
Sbjct: 26  VFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALF 85

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           +     EA+ +F E      +P+  T+ ++I  + +  ++++      +M   G  P + 
Sbjct: 86  ESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVP 145

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYN LI G C+   V    E+L ++   +  +P+  TY  +I G+C+   + +A  + ++
Sbjct: 146 TYNALIDGYCKEGMVEAAQEIL-DLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSK 204

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M    + PS VT+N LI G  K+G + SA  +   M   G +PD  T+S  ID  C+ G+
Sbjct: 205 MLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGR 264

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +   L + +K K +  N   +T LI+  CK  +++DA   L ++   D +P    YN 
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +IDG CK   V EA +++  M +K  K    T+TILI+    +G    A  I ++M+  G
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG 384

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             PD     + I      G   EA  +M    E
Sbjct: 385 YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE 417



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 199/451 (44%), Gaps = 30/451 (6%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++   C+ G+ ++ Q + D M S+   PN       +    R      A  LL
Sbjct: 143 SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL 202

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +T S   YNSL++   K    D A  +          PD WT+++ I  L + 
Sbjct: 203 SKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKK 262

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +++A   F  +   G   + V Y  LI G C+  ++   + LL  +    +  P+  T
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM-LTEDCLPNSST 321

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G CK  K+ +A  +   M   G+K +  T+ +LI    K G+   A  + ++M+
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S GY PDV  +++ I  +C  G + +   +   M  + + P+  T+T++I+A      LN
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLN 441

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKA------GNV------------DEANV--- 493
            A   LK++      P    Y+ +I    K        NV            D A+V   
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKM 501

Query: 494 --------IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
                   +  +M E  C P+  T+  LIIG C  GR+  A  +F+ M   G +P +   
Sbjct: 502 MKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIY 561

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           NSL++C  + G+  +A R++    E  +L L
Sbjct: 562 NSLLNCCCELGIYGDAVRLVGAMMEHGHLPL 592



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 191/437 (43%), Gaps = 30/437 (6%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  S  TYN ++   C++G  DS   + + M  +G +P+      F+ +  + G+ + A 
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEAN 269

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L +  +   +  +  +Y +L++   K    D+A  +          P++ T+N LI GL
Sbjct: 270 VLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +  +V++A      M   G    + TY  LI  + +  +    H +L ++   S + PD
Sbjct: 330 CKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM-VSSGYQPD 388

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V  YT+ I  +C  G + +A  + + M   G+ P A+T+ ++ID +G +G +  A  + +
Sbjct: 389 VYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLK 448

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNG-----------------------------QLNQGL 422
           RM   G  P   T+S LI    +                               +    L
Sbjct: 449 RMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETAL 508

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L ++M     SPN+ T+  LI  LCK  RL  A++    +    + P   +YN +++  
Sbjct: 509 ELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCC 568

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+ G   +A  +V  M E    P   +  +L  G   +G   +A  +F+ +L+ G   D+
Sbjct: 569 CELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDE 628

Query: 543 ITVNSLISCLLKGGMPN 559
           +    LI  LLK G+ +
Sbjct: 629 VAWKILIDGLLKNGLSD 645



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 9/243 (3%)

Query: 338 VISGYCKLGKM---------DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +++GYCKLG +         + A  ++N M   G + + V++  LI G  +VG +     
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + ++M      P V T++ ++     +G+  + + L  EM+ +   PN++T+T++INA+C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           KE +L + RR L ++    LVP    YN +IDG+CK G V+ A  I+  M    C P++ 
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+  LI G C K  +  A+++ +KML     P  +T NSLI    K G  + A+R++   
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 569 SED 571
           +E+
Sbjct: 241 NEN 243


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 231/486 (47%), Gaps = 44/486 (9%)

Query: 119 EKLSPLNSLEVIKRLDNPK---LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
           EK S L   +V+KRL +     L L++ +    + S  H+  TY +++  L      D V
Sbjct: 36  EKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCV 95

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
           Q +   M+ +G   +  +    + S  RAG  + A     + +   V  +  +YN +L+A
Sbjct: 96  QYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDA 155

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L+ +N       ++    +   +P+ +T+NIL++ L +   V  A +   +M S GC PD
Sbjct: 156 LLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPD 215

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
            V+Y TLIS LC++ +V    EL         F+P V  Y ++I+G CK    ++A  + 
Sbjct: 216 EVSYTTLISSLCKLGKVKEAREL------AMSFTPSVPVYNALINGVCKEYTFEEAFQLL 269

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +EM + GI P+ +++  +I+     GN+  +  +  +M + G  P++ TF+SLI G+   
Sbjct: 270 DEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLK 329

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G  ++ L   D M  + + PNV  +  L++ LC +  L DA     Q++ N   P    Y
Sbjct: 330 GGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTY 389

Query: 476 NPVIDGFCKAGNVD-----------------------------------EANVIVAEMEE 500
           + +IDG+ KAG++D                                   +A  ++  M+ 
Sbjct: 390 SALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQV 449

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           + C P+ VTF   I G C  GR+  AI +F++M   GC P+  T N L+  LLK     E
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509

Query: 561 AFRIMQ 566
           AF +++
Sbjct: 510 AFGLVK 515



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 203/416 (48%), Gaps = 14/416 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++++LC+    D    +   M S G  P+       +SS  + GK   A+ L   F
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF 242

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P     S  +YN+L+N + K+   +EA  +  E       P+  ++  +I  LS  G V
Sbjct: 243 TP-----SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNV 297

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG--HELLK--EVKFKSEFSPDVV 333
           + +      M + GCSP++ T+ +LI G        +G  HE L   +   +    P+VV
Sbjct: 298 ELSLAVLAKMFARGCSPNLHTFTSLIKGF-----FLKGGSHEALDFWDRMIREGVVPNVV 352

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y +++ G C    +  A  ++N+M   G  P+  T++ LIDG+ K G++  A  +   M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           ++ G  P+VV ++ ++D  CRN   NQ   L + M+ +N  PN  TF   I  LC   R+
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRV 472

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A +   Q+  +   P    YN ++D   K     EA  +V +ME +  + + VT+  +
Sbjct: 473 DWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTI 532

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           I G+C  G + EA+ +  KM+  G  PD ITVN +I    K G  N A ++M R S
Sbjct: 533 IYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLS 588



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 59/131 (45%)

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ ++I  L  E  ++  +  L+Q+K   +     ++  VI  + +AG+ ++A      M
Sbjct: 78  TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           ++ R KP    +  ++     + R      I++ M + G  P+  T N L+  L K    
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197

Query: 559 NEAFRIMQRAS 569
           + A +++   S
Sbjct: 198 DGAHKLLVEMS 208


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/346 (34%), Positives = 180/346 (52%), Gaps = 10/346 (2%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           QPD  T+  +I GL +IGE   A   F  MG  GC PD+VTY+T+I  LC+   V    +
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +   +K K   SP++ TY S+I G C   +  +A+ + NEM S  I P+ VTF++LI+ F
Sbjct: 67  IFSYMKAKG-ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K GN+  A  + + M   G  P+VVT+SSL++GY    ++ +  KL D M  K   P+V
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV 185

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           +++ ILIN  CK  R+ +A++   ++    L P    YN +IDG C+ G + EA+ +   
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M      PD  T++IL+ G C +G + +A  +F  M      P+ +  N LI  + K   
Sbjct: 246 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 305

Query: 558 PNEAFRIMQRASEDQNLQ--------LPSWKKAVPLRTNTDIPVAA 595
             EA ++       Q LQ           WK+   LR N  I +++
Sbjct: 306 LKEARKLFSELFV-QGLQPNMKHWKLFEIWKRMAALRMNFLIMLSS 350



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 160/313 (51%), Gaps = 1/313 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC++G   +   +F  M   G  P+       + S  +  + + A  + S  
Sbjct: 12  TYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   ++ + F YNSL+  L   +   EA  M  E   L   P+  TF++LI    + G V
Sbjct: 72  KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G  P++VTY++L++G     EV    +L  +V       PDV +Y  
Sbjct: 132 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLF-DVMITKGCKPDVFSYNI 190

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  ++ +A  ++NEM   G+ P  V++N LIDG  ++G +  A  + + ML+ G
Sbjct: 191 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 250

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD+ T+S L+DG+C+ G L +  +L   M+   L PN+  + ILI+A+CK   L +AR
Sbjct: 251 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 310

Query: 458 RFLKQLKWNDLVP 470
           +   +L    L P
Sbjct: 311 KLFSELFVQGLQP 323



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 170/325 (52%), Gaps = 1/325 (0%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M + G+ P+       ++   + G+  AA GL  +            Y++++++L K   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            +EA+ +F         P+ +T+N LIQGL      ++A     +M S    P+IVT++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI+  C+   V     +LK +  +    P+VVTY+S+++GY    ++ +A  +++ M + 
Sbjct: 121 LINIFCKEGNVFEARGVLKTMT-EMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G KP   ++N+LI+G+ K   +  A+ +   M+  G  PD+V++++LIDG C+ G+L + 
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             L   M      P++ T++IL++  CK+  L  A R  + ++   L P   MYN +ID 
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPD 506
            CK+ N+ EA  + +E+  +  +P+
Sbjct: 300 MCKSRNLKEARKLFSELFVQGLQPN 324



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 135/247 (54%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           + PDV TYT++I+G CK+G+   A G++ +M   G +P  VT++ +ID   K   +  A 
Sbjct: 6   YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M + G  P++ T++SLI G C   +  +   + +EM   N+ PN+ TF++LIN  
Sbjct: 66  DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CKE  + +AR  LK +    + P    Y+ +++G+     V EA  +   M  K CKPD 
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV 185

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ++ ILI G+C   R+ EA  +FN+M+  G  PD ++ N+LI  L + G   EA  + + 
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245

Query: 568 ASEDQNL 574
              + NL
Sbjct: 246 MLTNGNL 252



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 1/280 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ SLC+    +    +F YM++ G  PN       +       +   A  +L++ 
Sbjct: 47  TYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEM 106

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   ++ L+N   K+ N  EA  + K    +  +P+  T++ L+ G S   EV
Sbjct: 107 MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV 166

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M + GC PD+ +YN LI+G C+   +    +L  E+      +PD+V+Y +
Sbjct: 167 FEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM-IHQGLTPDIVSYNT 225

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C+LG++ +A  ++  M + G  P   T+++L+DGF K G +  A  +   M S  
Sbjct: 226 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 285

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             P++V ++ LID  C++  L +  KL  E+  + L PN+
Sbjct: 286 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 88/158 (55%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M++ GY PDV T++++I+G C+ G+      L  +M      P+V T++ +I++LCK+ R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +N+A      +K   + P  F YN +I G C      EA+ ++ EM      P+ VTF++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           LI   C +G + EA  +   M  +G  P+ +T +SL++
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMN 158



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 71/143 (49%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  +   P+V+T+T +IN LCK      A    K++      P    Y+ +ID  CK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           V+EA  I + M+ K   P+  T+  LI G C   R  EA ++ N+M+ +   P+ +T + 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 548 LISCLLKGGMPNEAFRIMQRASE 570
           LI+   K G   EA  +++  +E
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTE 143



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 50/113 (44%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           ++  L     +YN ++  LC++G       +F  M ++G+LP+       +    + G  
Sbjct: 212 IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 271

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             A  L    +   +  +  MYN L++A+ K  N  EA  +F E F    QP+
Sbjct: 272 AKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 216/465 (46%), Gaps = 57/465 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++V+R LC+ G  D  + +   +R  G   N       +  C +A + D A  +    
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 218 RPGEVTM-STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
             G   +     +NSLL  L       EA  +F+   +   +P+  +++ L+ GL + G 
Sbjct: 135 SAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A   + +M    C PD+V Y + ++GLC+ N VA   +  +++  K     D V ++
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGS-KADAVAFS 253

Query: 337 SVISGYCKLGK-----------------MDKATGIYNEMNSCGIKPSAV----------- 368
           +VI   CK G                  +D+A   + EM S    PSA            
Sbjct: 254 TVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313

Query: 369 ---------------------------TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
                                      T+N+++D   K   +  A+ +   M ++G  PD
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VVT+S+L+DG C+ G+L++   L +EM  + + P+ +T   ++NAL K  +++ A   L+
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLE 433

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +K     P    YN ++DG CKAG +DEA   +A+M   +C PD  ++TI+I   C  G
Sbjct: 434 TMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSG 493

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +   A +IF +M++ G  PD +  +SL+  L + G+ + A  +++
Sbjct: 494 QAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 216/461 (46%), Gaps = 22/461 (4%)

Query: 128 EVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           EV++ L      ++  ++        HS  TYN  + +L +          F  M+  G+
Sbjct: 10  EVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGY 69

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
            P+       +    +AG+ D AK LL Q R   V ++   Y+ +++   K +  D+A+ 
Sbjct: 70  PPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALE 129

Query: 248 MFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           +FK         PD  TFN L++GL     + +AF  F  M   GC P++++Y+TL+ GL
Sbjct: 130 IFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+   +     L +E+  KS   PD+V YTS ++G CK  ++ +A     +M + G K  
Sbjct: 190 CKAGRLDEACRLWEEMVEKS-CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMR-----------------ERMLSFGYLPDVVTFSSLI 409
           AV F+ +I    K G+   A+                    E M+S  + P    F++LI
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308

Query: 410 DGYCRNGQLNQGLKLCDEMKGKN---LSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
              C++ +L  G+ L   MK        PN+ T+ I+++ LCK  +L++A+  + ++   
Sbjct: 309 HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANY 368

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            L P    Y+ ++DG CK G +D A  ++ EM ++   PD  T   ++      G++  A
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +S    M   G  PD +T N+L+  L K G  +EA   + +
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 212/436 (48%), Gaps = 24/436 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGL 213
           +Y+ ++  LC+ G  D    +++ M     +P+      FV+   +A +    CD  + +
Sbjct: 181 SYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240

Query: 214 LSQFRPGE-VTMSTFM------------YNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           +++    + V  ST +             N ++  L +    DEA   F+E       P 
Sbjct: 241 VTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPS 300

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGS---FGCSPDIVTYNTLISGLCRVNEVARGHE 317
              FN LI  + +   +      F  M S   F C P++ TYN ++  LC+  ++    E
Sbjct: 301 AELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L+ E+      SPDVVTY++++ G CKLGK+D+A  +  EM+  G+ P + T   +++  
Sbjct: 361 LVNEMA-NYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G +  A    E M + G  PD+VT+++L+DG C+ G++++ +    +M     +P+V
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           +++TI+I ALC+  +   A    +++    ++P   +Y+ ++DG  + G  D A   +  
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA---LEL 536

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           ++   CKPD V   +++ G C  G+  +A  +  +M   G   D  T  +++  L K G 
Sbjct: 537 LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGK 596

Query: 558 PNEAFRIMQRASEDQN 573
            ++A +++  ASE   
Sbjct: 597 VDKARQLVDDASETHT 612



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 168/364 (46%), Gaps = 46/364 (12%)

Query: 186 GHLPNSP--MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           GH   +   MIE    S +    C   + ++S+  P     S  ++N+L++A+ K     
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPP----SAELFNTLIHAVCKSKRLP 318

Query: 244 EAVYMF---KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           + V +F   K     Y  P+  T+NI++  L +  ++ +A E   +M ++G SPD+VTY+
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEF-------------------------------- 328
            L+ GLC++ ++ R  +LL+E+  +  F                                
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 329 --SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             +PD+VTY +++ G CK G++D+A     +M +    P   ++ ++I    + G    A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + + M+  G LPD V + SL+DG  RNG  +  L+L   +K     P+     ++++ 
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDG 555

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK  +  DA   ++++         F Y  V+ G  K G VD+A  +V +  E     +
Sbjct: 556 LCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVE 615

Query: 507 KVTF 510
           +++ 
Sbjct: 616 RLSM 619



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 4/273 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN+++ +LC+    D  Q + + M + G  P+       V    + GK D A  LL
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     V   +F   S+LNAL K    D A+   +      S PD  T+N L+ GL + 
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +A  F   M +  C+PD+ +Y  +I+ LCR  + A  H + +E+  K    PD V 
Sbjct: 458 GRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEM-VKRGVLPDTVL 516

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y S++ G  + G  D A  +   + +   KP  V   +++DG  K G    A  + ERM 
Sbjct: 517 YHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMA 573

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             G+  D  T+ +++ G  + G++++  +L D+
Sbjct: 574 DAGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 108/242 (44%), Gaps = 4/242 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
            N  L+    TY+ ++  LC++G  D    + + M  +G  P+S      +++  +AGK 
Sbjct: 366 ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A   L   +    T     YN+LL+ L K    DEA+    +       PD +++ I+
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTII 485

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I  L R G+   A   F +M   G  PD V Y++L+ GL R        ELLK     S 
Sbjct: 486 ITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK----TSL 541

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD V +  V+ G CK GK + A  +   M   G    A T+  ++ G  K+G +  A 
Sbjct: 542 CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKAR 601

Query: 388 YM 389
            +
Sbjct: 602 QL 603


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 203/427 (47%), Gaps = 19/427 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
           T+  +M  LC  G       + D M  DG  PN       V    + G   +A  LL   
Sbjct: 181 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 240

Query: 215 ---SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQG 270
              S  +P  V         ++N         EA  + +E   R    PD  T+N LI  
Sbjct: 241 EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINA 300

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             + G+  +A E + +M   G  P  +TY+++I G C+ N +     +   +  K   SP
Sbjct: 301 FVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG-CSP 359

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D++T+ ++I+GYC+  ++D    + +EM   G+  + +T+  LI GF +VG++ +A+ + 
Sbjct: 360 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 419

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL-----------SPNVYT 439
           + M+S G  P+VVT ++L+DG C NG+L   L++   M+   +            P+V T
Sbjct: 420 QEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQT 479

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + ILI+ L  E +  +A    +++    +VP    YN VI G CK   +DEA  +   M 
Sbjct: 480 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG 539

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K   P+ VTFT LI G+C  GR+ + + +F +M R G   + IT  +LI    K G  N
Sbjct: 540 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNIN 599

Query: 560 EAFRIMQ 566
            A  I Q
Sbjct: 600 GALDIFQ 606



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 207/413 (50%), Gaps = 19/413 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKC------DAA 210
           TY  ++  +C+MG   S   +   M    H+ PN  +      +C+  G C      +A 
Sbjct: 216 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQ 275

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + L       +++     YN+L+NA VK+    EA  ++ E       P T T++ +I G
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             +   +  A   FY M + GCSPDI+T+NTLI+G CR   V  G +LL E+  ++    
Sbjct: 336 FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT-EAGLVA 394

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           + +TYT++I G+C++G ++ A  +  EM S G+ P+ VT N L+DG    G +  A  M 
Sbjct: 395 NTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMF 454

Query: 391 ERMLSF-----------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           + M              G  PDV T++ LI G    G+  +  +L +EM  + + P+  T
Sbjct: 455 KAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 514

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  +I+ LCK++RL++A +    +      P    +  +I+G+CKAG VD+   +  EM 
Sbjct: 515 YNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 574

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +    + +T+  LI G    G +  A+ IF +M+  G  PD IT+ ++++ L
Sbjct: 575 RRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 188/364 (51%), Gaps = 22/364 (6%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +P  VT +T M     N L ++    EAV +         QP+  T+  ++ G+ ++G+ 
Sbjct: 176 KPNVVTFTTLM-----NGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230

Query: 278 KKAFEFFYDMGSFG-CSPDIVTY-----NTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
             A      M       P++V +       +I+G C     +   +LL+E+  + + SPD
Sbjct: 231 VSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPD 290

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTY ++I+ + K GK  +A  +Y+EM   GI PS +T++ +IDGF K   + +AE+M  
Sbjct: 291 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFY 350

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M + G  PD++TF++LI GYCR  +++ G+KL  EM    L  N  T+T LI+  C+  
Sbjct: 351 LMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVG 410

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR--------- 502
            LN A+  L+++  + + P     N ++DG C  G + +A  +   M++ +         
Sbjct: 411 DLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPF 470

Query: 503 --CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
              +PD  T+ ILI G   +G+ +EA  ++ +M   G  PD IT NS+I  L K    +E
Sbjct: 471 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDE 530

Query: 561 AFRI 564
           A ++
Sbjct: 531 ATQM 534



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 203/420 (48%), Gaps = 20/420 (4%)

Query: 170 GLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
           GL D++ +  D +RS    P   +I+F   +   +R G+ D    L  +     V  + +
Sbjct: 58  GLEDAIDLFGDMVRSR---PLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAY 114

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            +  L+      +    A+  F +  +L   P   TF+ L+ GL     + +A + F+ M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
               C P++VT+ TL++GLCR   V     LL  +  +    P+ +TY +++ G CK+G 
Sbjct: 175 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM-LEDGLQPNQITYGTIVDGMCKMGD 229

Query: 348 MDKATGIYNEMNSCG-IKPSAVTF-----NVLIDGFGKVGNMVSAEYMRERMLSFGYL-P 400
              A  +  +M     IKP+ V +       +I+GF   G    A+ + + ML    + P
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           DVVT+++LI+ + + G+  +  +L DEM  + + P+  T++ +I+  CK+NRL+ A    
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
             +      P    +N +I G+C+A  VD+   ++ EM E     + +T+T LI G C  
Sbjct: 350 YLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQV 409

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           G +  A  +  +M+  G  P+ +T N+L+  L   G   +A   F+ MQ++  D +   P
Sbjct: 410 GDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP 469



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 166/353 (47%), Gaps = 12/353 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +  + G     + ++D M   G +P++      +    +  + DAA+ +    
Sbjct: 293 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLM 352

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +     +N+L+    +    D+ + +  E        +T T+  LI G  ++G++
Sbjct: 353 ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF--------- 328
             A +   +M S G  P++VT NTL+ GLC   ++    E+ K ++ KS+          
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ-KSKMDIDASHPFN 471

Query: 329 --SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PDV TY  +ISG    GK  +A  +Y EM   GI P  +T+N +I G  K   +  A
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             M + M S  + P+VVTF++LI+GYC+ G+++ GL+L  EM  + +  N  T+  LI+ 
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
             K   +N A    +++  + + P       ++ G      +  A  ++ +++
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 4/203 (1%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L  GF ++  +  A  +   M+    LP V+ F  L+    R G+L+  + L  +M+ + 
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  N Y+FTIL+   C  ++L  A     ++      P    ++ ++ G C    + EA 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  +M    CKP+ VTFT L+ G C +GR+VEA+++ ++ML  G  P+ IT  +++  +
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 553 LKGGMPNEAFRIMQRASEDQNLQ 575
            K G    A  ++++  E  +++
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIK 247



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 12/203 (5%)

Query: 134 DNPKLG-----LKFLEFSRVNLSLNHSF-------KTYNLVMRSLCEMGLHDSVQVVFDY 181
           DN KL       K ++ S++++  +H F       +TYN+++  L   G     + +++ 
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M   G +P++      +    +  + D A  +         + +   + +L+N   K   
Sbjct: 503 MPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 562

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            D+ + +F E  R     +  T+  LI G  ++G +  A + F +M + G  PD +T   
Sbjct: 563 VDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRN 622

Query: 302 LISGLCRVNEVARGHELLKEVKF 324
           +++GL    E+ R   +L++++ 
Sbjct: 623 MLTGLWSKEELKRAVAMLEDLQM 645


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 216/454 (47%), Gaps = 71/454 (15%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P IEF   + S ++A +   A  L  Q     +       N L+N   +  +   + 
Sbjct: 54  PIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSF 113

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F +  +    PD  TF ILI+GL   GEV KA  F   + + G   D V+Y TLI+GL
Sbjct: 114 SVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGL 173

Query: 307 CRVNEVARGHELLKEVKFK----------------------------------SEFSPDV 332
           CRV E     +LL+ V  K                                     SPDV
Sbjct: 174 CRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDV 233

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY+S+ISG+C +GK+  A  ++N M S  I P+  TF++LIDGF K G +  A+ +   
Sbjct: 234 VTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAV 293

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+      DVVT++SL+DGYC   Q+N+   L + M  + ++P+V++++I+IN  CK   
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG-------------------------- 486
           +++A +  +++    + P    YN ++DG CK+G                          
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413

Query: 487 ---------NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
                    +VD+A V++ +++EK  +PD  T+T+LI G C  GR+ +A  +F  +L  G
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +P+  T  SLI+     G  +E   ++ +  ++
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDN 507



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 216/410 (52%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ ++++ LC  G         D + + G   +       ++   R G+  AA  LL + 
Sbjct: 130 TFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRV 189

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  MY+++++++ K    ++A  ++ E       PD  T++ LI G   +G++
Sbjct: 190 DGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKL 249

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A + F  M S   +P++ T++ LI G C+  +V     +L  V  K     DVVTY S
Sbjct: 250 KYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVL-AVMMKKNVKLDVVTYNS 308

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC + +++KA  ++N M   G+ P   +++++I+GF K+  +  A  + E M    
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ 368

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT++SL+DG C++G+ +  L+L DEM  +    N+ T+  +++A+CK N ++ A 
Sbjct: 369 IFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++K   + P  F Y  +I+G CK G +D+A  +  ++  K   P+  T+T LI G 
Sbjct: 429 VLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGF 488

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C KG   E +++ +KM   GC P+ IT   LI  L +    ++A ++++ 
Sbjct: 489 CNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLRE 538



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 38/312 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++   C +G       +F+ M SD   PN       +    + GK   AK +L+  
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294

Query: 218 RPGEVTMSTFMYNSLLNA--LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
               V +    YNSL++   LVKQ N  +A  +F    +    PD W+++I+I G  +I 
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVN--KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIK 352

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-------- 327
            V +A + F +M      P++VTYN+L+ GLC+    +   EL+ E+  + +        
Sbjct: 353 MVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYN 412

Query: 328 --------------------------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                                       PD+ TYT +I+G CK+G++D A  ++ ++   
Sbjct: 413 SILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVK 472

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G  P+  T+  LI+GF   G       M  +M   G +P+ +T+  LI       + ++ 
Sbjct: 473 GYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKA 532

Query: 422 LKLCDEMKGKNL 433
            KL  EM  + L
Sbjct: 533 EKLLREMIARGL 544



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 1/242 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C +   +  + +F+ M   G  P+       ++   +    D A  L  + 
Sbjct: 305 TYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM 364

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++  +   YNSL++ L K      A+ +  E        +  T+N ++  + +   V
Sbjct: 365 HCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHV 424

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      +   G  PDI TY  LI+GLC+V  +    ++ +++  K  +SP++ TYTS
Sbjct: 425 DKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG-YSPNIYTYTS 483

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+C  G  D+   + ++M   G  P+A+T+ +LI    +      AE +   M++ G
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543

Query: 398 YL 399
            L
Sbjct: 544 LL 545


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 202/405 (49%), Gaps = 4/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++++LC  G       +FD M S    P+       V       + + A  LLS+ 
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + ++   Y S++  L  +    +AV + ++        D   F  ++ G  R G++
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +F +M   G + D VTY  LI+GLCR  E+     +L+E++ K     D VTYT 
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG-LDVDAVTYTV 430

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK+GKM +A  ++N+M    + P+ VT+  L DG  K G++ +A  +   M S G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++ T++SLI+G C+ G L Q ++   +M    L P+VYT+T +I ALC+   L+ A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    + P    YN +++GFC +G V+    ++  M EK   P+  T+  L+  +
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C++  M     I+  ML     P++ T N LI    K     EA 
Sbjct: 611 CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 183/367 (49%), Gaps = 41/367 (11%)

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA++ +   DEAV +F+E      + +T ++NIL++ L   G +K A + F +M S    
Sbjct: 230 NAVLCRLPLDEAVQLFQEL----PEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---P 282

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSP---------------------- 330
           PD+VTY  ++ G C ++E+    +LL E+  +  E +P                      
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 331 -----------DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
                      D   +T+V+SG+C+ G +  A   ++EM   G+    VT+  LI+G  +
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +  AE + + M   G   D VT++ LIDGYC+ G++ +   + ++M  K ++PNV T
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T L + LCK+  +  A   L ++    L    F YN +I+G CKAGN+++A   + +M+
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E   KPD  T+T +I   C    +  A S+  +ML  G  P  +T N L++     G   
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 560 EAFRIMQ 566
              R+++
Sbjct: 583 GGKRLLE 589



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 172/360 (47%), Gaps = 39/360 (10%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  YN LL AL       +A  +F E   + S PD  T+ I++ G   + E++ A +  
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 285 YDMGSFGCSPDIVTYN-----------------------------------TLISGLCRV 309
            +M + G   + V Y                                    T++SG CR 
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++A       E++ K   + D VTYT++I+G C+ G++ +A  +  EM   G+   AVT
Sbjct: 369 GDLAAARNWFDEMQ-KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           + VLIDG+ KVG M  A  +  +M+     P+VVT+++L DG C+ G +    +L  EM 
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K L  N++T+  LIN LCK   L  A R +  +    L P  + Y  +I   C++  +D
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A+ ++ EM +K  KP  VT+ +L+ G CM GR+     +   ML     P+  T NSL+
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 1/343 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC  G     + V   M   G   ++      +    + GK   A  + ++ 
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT +   Y +L + L KQ +   A  +  E      + + +T+N LI GL + G +
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     DM   G  PD+ TY T+I  LC+  E+ R H LL+E+  K    P +VTY  
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNV 570

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G+C  G+++    +   M    I P+  T+N L+  +    NM S   + + MLS  
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+  T++ LI G+C+   + + L    EM  K       ++  LI  L K+ +  +AR
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           R  ++++   L  +P +YN  ID      N++    +  E+ E
Sbjct: 691 RLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 396 FGYLPD--VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           F  LP+    +++ L+   C  G++    +L DEM      P+V T+ I+++  C  + L
Sbjct: 245 FQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSEL 301

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A + L ++    L   P  Y  VI   C  G V +A  +V +M       D   FT +
Sbjct: 302 ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTV 361

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           + G C KG +  A + F++M + G A D +T  +LI+ L + G   EA R++Q   ED+ 
Sbjct: 362 MSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM-EDKG 420

Query: 574 LQL 576
           L +
Sbjct: 421 LDV 423


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 181/336 (53%), Gaps = 1/336 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN L+N   K+ +  +A  +F E  +   +P T +FN LI GL +   + + F     M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                PD+ TY+ LI GLC+   +    +L  E++ +    P+ +T+T++I G C+  ++
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG-LRPNGITFTALIDGQCRSRRI 344

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D A   Y++M + G+KP  V +N L++G  KVG++  A  + + M   G  PD +T+++L
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTL 404

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDGYC+ G L   +++   M  + +  +   FT LI+  C++ R+ DA R L+++    +
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  VIDG+CK GNV     ++ EM+    KP  +T+ +L+ G C +G+M  A  
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +   ML +G  PDDIT N L+    K G   +  ++
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 185/349 (53%), Gaps = 5/349 (1%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  P        ++   + G    AK + ++ R   +  +T  +N+L+N L K  N DE 
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 246 VYMFK--EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
             + K  E  R+Y  PD +T+++LI GL + G +  A + F +M   G  P+ +T+  LI
Sbjct: 278 FRLKKTMEENRIY--PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            G CR   +        ++       PD+V Y ++++G CK+G ++KA  + +EM   G+
Sbjct: 336 DGQCRSRRIDSAMNTYHQM-LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGM 394

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP  +T+  LIDG+ K G++ SA  +R+ M   G + D V F++LI G+CR+G++    +
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAER 454

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
              EM    + P+  T+T++I+  CK+  +    + LK+++ N   P    YN +++G C
Sbjct: 455 TLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLC 514

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           K G +  AN+++  M      PD +T+ IL+ GHC  G+  + + + N+
Sbjct: 515 KQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 168/332 (50%), Gaps = 1/332 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C+ G     +++F+ +R  G  P +      ++   ++   D    L     
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    F Y+ L++ L K+   D A  +F E  +   +P+  TF  LI G  R   + 
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   ++ M + G  PD+V YNTL++GLC+V +V +  +L+ E++      PD +TYT++
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVG-MKPDKITYTTL 404

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYCK G ++ A  I   MN  G+    V F  LI GF + G +  AE     M+  G 
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T++ +IDGYC+ G +  G KL  EM+     P V T+ +L+N LCK+ ++ +A  
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
            L+ +    + P    YN +++G CK G  ++
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAED 556



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 134/243 (55%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F P V  Y  +I+ +CK G +  A  I+NE+   G++P+ V+FN LI+G  K  N+    
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +++ M      PDV T+S LI G C+ G+L+   +L DEM+ + L PN  TFT LI+  
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+  R++ A     Q+    + P   MYN +++G CK G+V++A  +V EM     KPDK
Sbjct: 339 CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDK 398

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +T+T LI G+C +G +  A+ I   M   G   D++   +LIS   + G   +A R ++ 
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458

Query: 568 ASE 570
             E
Sbjct: 459 MVE 461



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 138/270 (51%), Gaps = 1/270 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC+ G  D  + +FD M+  G  PN       +    R+ + D+A     Q 
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM 354

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V     MYN+LLN L K  + ++A  +  E   +  +PD  T+  LI G  + G++
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E    M   G   D V +  LISG CR   V      L+E+  ++   PD  TYT 
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM-VEAGMKPDDATYTM 473

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI GYCK G +     +  EM   G KP  +T+NVL++G  K G M +A  + E ML+ G
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             PD +T++ L++G+C+NG+    LKL +E
Sbjct: 534 VTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 35/180 (19%)

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F +L+  Y  +G ++  ++    ++  N     +    L++ +   N       F  ++ 
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE--------------------------- 497
                PK   YN +I+ FCK G++ +A +I  E                           
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 498 --------MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
                   MEE R  PD  T+++LI G C +GR+  A  +F++M + G  P+ IT  +LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%)

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           +E+ E    P    + ILI   C +G + +A  IFN++ + G  P  ++ N+LI+ L K 
Sbjct: 212 SEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS 271

Query: 556 GMPNEAFRIMQRASEDQ 572
              +E FR+ +   E++
Sbjct: 272 RNLDEGFRLKKTMEENR 288


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 200/409 (48%), Gaps = 1/409 (0%)

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           R+ +S   S  T+N ++      G  +    +   M ++G +P        +    R+G 
Sbjct: 293 RMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGN 352

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            +AA+    + R   +      YNSL+N   K  N  EA+++F +  R    P   T+NI
Sbjct: 353 VEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNI 412

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L+ G  R+G++++A  F  +M   GC PD+ TY  L++G  +V  +A   E   E+  K 
Sbjct: 413 LLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKG 472

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD   Y + IS    LG   +A  +   M S GI    VT+N+ +DG  K GN+  A
Sbjct: 473 -LQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDA 531

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +  +M+S G  PD +T++ LI  +C  G+L +   + D M    L P+  T+T+ I+A
Sbjct: 532 YVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA 591

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            C+   L  A  + +++    + P    YN +I   C+ G  + A     EM E+   P+
Sbjct: 592 YCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPN 651

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           K T+T+LI G+C +G   EAI ++++M + G  PD  T N+L     +G
Sbjct: 652 KYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEG 700



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 210/454 (46%), Gaps = 18/454 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM--RSDGHLPNSPMIEFFVSSCIRAG 205
           + L +  S  TYN ++ S    G  D    +   M  R  G LP+       ++   R G
Sbjct: 223 LQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKG 282

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + + A  L+ + R  +   S F +N L+     + + ++A  +  E       P   T+N
Sbjct: 283 ELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYN 341

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            +I G+ R G V+ A   F +M + G  PD++TYN+LI+G C+   +     L  ++K +
Sbjct: 342 TIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLK-R 400

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +  +P V+TY  ++ GYC+LG +++A     EM   G +P   T+ +L++G  KV N+  
Sbjct: 401 AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAM 460

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
                + MLS G  PD   +++ I      G  ++  +L + M  + +S +  T+ I ++
Sbjct: 461 VREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLD 520

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK   L DA     ++  + L P    Y  +I   C+ G + EA  I   M      P
Sbjct: 521 GLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPP 580

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             VT+T+ I  +C +G +  A   F KML  G  P+++T N LI  L + G  N A++  
Sbjct: 581 SAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHF 640

Query: 566 QRASE--------------DQNLQLPSWKKAVPL 585
               E              D N +  +W++A+ L
Sbjct: 641 HEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRL 674



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 174/344 (50%), Gaps = 4/344 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L AL  +   D+   ++ E  +L  +P   T+N L+    R G V +A +   +M +
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259

Query: 290 F--GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              GC P  VTYN +I+GL R  E+ +  +L+  ++   + S    T+  +I+GY   G 
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKAS--AFTFNPLITGYFARGS 317

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           ++KA  +  EM + GI P+ VT+N +I G  + GN+ +A      M + G LPD++T++S
Sbjct: 318 VEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNS 377

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+GYC+ G L + L L  ++K   L+P+V T+ IL++  C+   L +ARRF +++    
Sbjct: 378 LINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG 437

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    Y  +++G  K  N+        EM  K  +PD   +   I    + G   EA 
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAF 497

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +   M+  G + D +T N  +  L K G   +A+ +  +   D
Sbjct: 498 QLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSD 541



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 168/375 (44%), Gaps = 36/375 (9%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           L+    N  +  +  TYN ++  +   G  ++ ++ F  MR+ G LP+       ++   
Sbjct: 324 LQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYC 383

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           +AG    A  L    +   +  S   YN LL+   +  + +EA    +E      QPD  
Sbjct: 384 KAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVS 443

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD--------------------------- 295
           T+ IL+ G  ++  +    EFF +M S G  PD                           
Sbjct: 444 TYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVM 503

Query: 296 --------IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
                    VTYN  + GLC+   +   + L  ++       PD +TYT +I  +C+ G+
Sbjct: 504 ISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKM-VSDGLQPDCITYTCLIHAHCERGR 562

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           + +A  I++ M   G+ PSAVT+ V I  + + GN+ SA    ++ML  G  P+ VT++ 
Sbjct: 563 LREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNV 622

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI   CR G+ N   +   EM  + LSPN YT+T+LI+  CKE    +A R   ++  + 
Sbjct: 623 LIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682

Query: 468 LVPKPFMYNPVIDGF 482
           + P    +N +  GF
Sbjct: 683 IHPDHCTHNALFKGF 697



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 99/237 (41%), Gaps = 36/237 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+ +  LC+ G      V++  M SDG  P+          CI               
Sbjct: 514 TYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD----------CI--------------- 548

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y  L++A  ++    EA  +F         P   T+ + I    R G +
Sbjct: 549 ----------TYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNL 598

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+ +F  M   G  P+ VTYN LI  LCR+      ++   E+  +   SP+  TYT 
Sbjct: 599 YSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEM-LERGLSPNKYTYTL 657

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +I G CK G  ++A  +Y+EM+  GI P   T N L  GF +  +  + +YM   +L
Sbjct: 658 LIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHAIQYMENVVL 714



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 3/132 (2%)

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM    + P +    +++ AL  E R +D R    ++    + P    YN ++D F + G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245

Query: 487 NVDEANVIVAEMEEKR--CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            VD+A  ++ EME +   C P  VT+ ++I G   KG + +A  + ++M R+       T
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFT 304

Query: 545 VNSLISCLLKGG 556
            N LI+     G
Sbjct: 305 FNPLITGYFARG 316


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 216/465 (46%), Gaps = 57/465 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++V+R LC+ G  D  + +   +R  G   N       +  C +A + D A  +    
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 218 RPGEVTM-STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
             G   +     +NSLL  L       EA  +F+   +   +P+  +++ L+ GL + G 
Sbjct: 135 SSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A   + +M    C PD+V Y + ++GLC+ N VA   +  +++  K     D V ++
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGS-KADAVAFS 253

Query: 337 SVISGYCKLGK-----------------MDKATGIYNEMNSCGIKPSAV----------- 368
           +VI   CK G                  +D+A   + EM S    PSA            
Sbjct: 254 TVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313

Query: 369 ---------------------------TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
                                      T+N+++D   K   +  A+ +   M ++G  PD
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VVT+S+L+DG C+ G+L++   L +EM  + + P+ +T   ++NAL K  +++ A   L+
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLE 433

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +K     P    YN ++DG CKAG +DEA   +A+M   +C PD  ++TI+I   C  G
Sbjct: 434 TMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSG 493

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +   A +IF +M++ G  PD +  +SL+  L + G+ + A  +++
Sbjct: 494 QAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK 538



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 216/461 (46%), Gaps = 22/461 (4%)

Query: 128 EVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           EV++ L      ++  ++        HS  TYN  + +L +          F  M+  G+
Sbjct: 10  EVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGY 69

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
            P+       +    +AG+ D AK LL Q R   V ++   Y+ +++   K +  D+A+ 
Sbjct: 70  PPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALE 129

Query: 248 MFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           +FK         PD  TFN L++GL     + +AF  F  M   GC P++++Y+TL+ GL
Sbjct: 130 IFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+   +     L +E+  KS   PD+V YTS ++G CK  ++ +A     +M + G K  
Sbjct: 190 CKAGRLDEACRLWEEMVEKS-CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMR-----------------ERMLSFGYLPDVVTFSSLI 409
           AV F+ +I    K G+   A+                    E M+S  + P    F++LI
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308

Query: 410 DGYCRNGQLNQGLKLCDEMKGKN---LSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
              C++ +L  G+ L   MK        PN+ T+ I+++ LCK  +L++A+  + ++   
Sbjct: 309 HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANY 368

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            L P    Y+ ++DG CK G +D A  ++ EM ++   PD  T   ++      G++  A
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +S    M   G  PD +T N+L+  L K G  +EA   + +
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 213/436 (48%), Gaps = 24/436 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGL 213
           +Y+ ++  LC+ G  D    +++ M     +P+      FV+   +A +    CD  + +
Sbjct: 181 SYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240

Query: 214 LSQFRPGE-VTMSTFM------------YNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           +++    + V  ST +             N ++  L +    DEA   F+E       P 
Sbjct: 241 VTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPS 300

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGS---FGCSPDIVTYNTLISGLCRVNEVARGHE 317
              FN LI  + +   +      F  M S   F C P++ TYN ++  LC+  ++    E
Sbjct: 301 AELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L+ E+      SPDVVTY++++ G CKLGK+D+A  +  EM+  G+ P + T   +++  
Sbjct: 361 LVNEMA-NYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G +  A    E M + G  PD+VT+++L+DG C+ G++++ +    +M     +P+V
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDV 479

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           +++TI+I ALC+  +   A    +++    ++P   +Y+ ++DG  + G  D A   +  
Sbjct: 480 FSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLA---LEL 536

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           ++   CKPD V   +++ G C  G+  +A  +  +M   G   D  T  S++S L K G 
Sbjct: 537 LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGK 596

Query: 558 PNEAFRIMQRASEDQN 573
            ++A +++  ASE   
Sbjct: 597 VDKARQLVDDASETHT 612



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 168/364 (46%), Gaps = 46/364 (12%)

Query: 186 GHLPNSP--MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           GH   +   MIE    S +    C   + ++S+  P     S  ++N+L++A+ K     
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPP----SAELFNTLIHAVCKSKRLP 318

Query: 244 EAVYMF---KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           + V +F   K     Y  P+  T+NI++  L +  ++ +A E   +M ++G SPD+VTY+
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEF-------------------------------- 328
            L+ GLC++ ++ R  +LL+E+  +  F                                
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 329 --SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             +PD+VTY +++ G CK G++D+A     +M +    P   ++ ++I    + G    A
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA 498

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + + M+  G LPD V + SL+DG  RNG  +  L+L   +K     P+     ++++ 
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDG 555

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK  +  DA   ++++         F Y  V+ G  K G VD+A  +V +  E     +
Sbjct: 556 LCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVE 615

Query: 507 KVTF 510
           +++ 
Sbjct: 616 RLSM 619



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 131/272 (48%), Gaps = 4/272 (1%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            +TYN+++ +LC+    D  Q + + M + G  P+       V    + GK D A  LL 
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     V   +F   S+LNAL K    D A+   +      S PD  T+N L+ GL + G
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + +A  F   M +  C+PD+ +Y  +I+ LCR  + A  H + +E+  K    PD V Y
Sbjct: 459 RIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEM-VKRGVLPDTVLY 517

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            S++ G  + G  D A  +   + +   KP  V   +++DG  K G    A  + ERM  
Sbjct: 518 HSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMAD 574

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            G+  D  T+ S++ G  + G++++  +L D+
Sbjct: 575 AGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 108/242 (44%), Gaps = 4/242 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
            N  L+    TY+ ++  LC++G  D    + + M  +G  P+S      +++  +AGK 
Sbjct: 366 ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A   L   +    T     YN+LL+ L K    DEA+    +       PD +++ I+
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTII 485

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I  L R G+   A   F +M   G  PD V Y++L+ GL R        ELLK     S 
Sbjct: 486 ITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK----TSL 541

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD V +  V+ G CK GK + A  +   M   G    A T+  ++ G  K+G +  A 
Sbjct: 542 CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKAR 601

Query: 388 YM 389
            +
Sbjct: 602 QL 603


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 266/591 (45%), Gaps = 63/591 (10%)

Query: 23  RRSNSIDFCGHKSEAAANGVGLPMTLLFFTVRPSRVRASTIAAIAHFHGLANGGSRPFDE 82
           +R N +D  G  + + ++ V L      ++ + +R+   + A+     GL NG ++ FD 
Sbjct: 25  KRGNKLDVSGRTTRSISSKVPL------WSRKRNRLVLVSAASQVESSGL-NGRAQKFDT 77

Query: 83  KEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKF 142
               +  SN              + + S   + ++ E +   N L  + R    + G KF
Sbjct: 78  LASGHSNSNG-------------NGHFSSANSSFVLEDVESNNHLRQLVRTGELEEGFKF 124

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           LE    + ++        L+ R  C MG       + + +   G +P+       +S   
Sbjct: 125 LENMVYHGNVPDIIPCTTLI-RGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYC 183

Query: 203 RAGKCDAAKGLLSQFR--PGEVTMSTFM------------------------------YN 230
           +AG+ + A  +L +    P  VT +T +                              Y 
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            L+ A  + +   +A+ +  E       PD  T+N+L+ G+ + G + +A +F  DM S 
Sbjct: 244 ILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           GC P+++T+N ++  +C         +LL ++  +  FSP VVT+  +I+  C+ G + +
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGR 362

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  I  +M   G +P+++++N L+ GF K   M  A    ERM+S G  PD+VT+++++ 
Sbjct: 363 AIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
             C++G++   +++ +++  K  SP + T+  +I+ L K  +   A + L +++  DL P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y+ ++ G  + G VDEA     E E    +P+ VTF  +++G C   +   AI   
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFL 542

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR---------IMQRASEDQ 572
             M+  GC P + +   LI  L   GM  EA           +M+R+S +Q
Sbjct: 543 VYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQ 593


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 259/545 (47%), Gaps = 64/545 (11%)

Query: 74  NGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLE-VIKR 132
           N    PF      Y   N   F     + L+   + S    + + ++ +P + L+ +   
Sbjct: 26  NNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKL--KTIVKETNPSSLLQHLFNS 83

Query: 133 LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
              P L L + ++++      H+ + +  ++  L     ++ ++ + D    + H  NS 
Sbjct: 84  EAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNST 143

Query: 193 M-----------------IEFFVSSCIRAGKCDAAKGLLSQF-RPGE--VTMSTFMYNSL 232
           +                 ++  V + ++ G+ D A   L  F R G+    +S    N +
Sbjct: 144 IFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLA---LEGFDRAGDYGFRLSALSCNPM 200

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           L +LVK+        ++KE  R     +  TF+++I GL ++G+ +KA +   DM ++G 
Sbjct: 201 LVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGF 260

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLK----------EVKF------------------ 324
           SP ++TYNT+I G C+  ++ +   LLK          E+ F                  
Sbjct: 261 SPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKK 320

Query: 325 ------KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
                 +    P+VVTY S+I+G C  GK+D+A G+ ++M+  G+KP+ VT+N LI+GF 
Sbjct: 321 VFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFC 380

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   +  A  M + +   G  P+V+TF++LID Y + G+++    L   M    + PNV 
Sbjct: 381 KKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVS 440

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  LI   C+E  + +AR+  K+++ N L      YN ++D  CK G   +A  ++ EM
Sbjct: 441 TYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500

Query: 499 ---EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL-K 554
              E+K  + + VT+ +LI G C KG++ EA  + N+ML  G  P+  T + L   ++ K
Sbjct: 501 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEK 560

Query: 555 GGMPN 559
           G +P+
Sbjct: 561 GFIPD 565



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 27/276 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  R  L  N    TYN ++  LC  G  D    + D M   G  PN       ++  
Sbjct: 322 FEEMQRQGLQPN--VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            +      A+ +L       +  +   +N+L++A  K    D+A  +          P+ 
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+N LI G  R G VK+A +   +M   G   D+VTYN L+  LC+  E  +   LL E
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 322 VKF--KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +    K     ++VTY  +I G+C  GK+++A  + NEM   G+ P+  T+++L      
Sbjct: 500 MTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL------ 553

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
                     R+ M+  G++PD       IDG+  N
Sbjct: 554 ----------RDEMMEKGFIPD-------IDGHLYN 572


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 202/410 (49%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  +   G       VFD M     LPN       +   I+ G  +A   L  Q 
Sbjct: 198 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM 257

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN LL+ L +     E   +  E       PD +T++IL  GLSR G+ 
Sbjct: 258 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 317

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K     F      G +    T + L++GLC+  +V+   E+L+ +   +   P  V Y +
Sbjct: 318 KAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL-VNAGLVPTRVIYNT 376

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC+ G+++ A   + +M S  IKP  +T+N LI+G  K   + +A+ +   M   G
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 436

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y R GQL +   +  EM+   L PNV ++  ++NA CK  ++ +A 
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +   D++P   +YN +ID + + G  D+A ++V +M+     P  VT+ +LI G 
Sbjct: 497 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C + ++ EA  I N +      PD ++ N+LIS     G  ++A  + QR
Sbjct: 557 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 606



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 214/414 (51%), Gaps = 2/414 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  + NL++ +L  +G H  V+  F  + S G  P++      V +C+ AG    A G+L
Sbjct: 124 SLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGML 183

Query: 215 SQF-RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
            +  R G    + F YN ++  + +     +AV +F E       P+  T+N +I G  +
Sbjct: 184 RRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIK 243

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G+++  F     M   G  P+ +TYN L+SGLCR   +     LL E+  + +  PD  
Sbjct: 244 GGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ-KMVPDGF 302

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+ +  G  + G       ++ +    G+     T ++L++G  K G +  AE + + +
Sbjct: 303 TYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 362

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           ++ G +P  V +++LI+GYC+ G+L        +MK +++ P+  T+  LIN LCK  R+
Sbjct: 363 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 422

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A+  L +++ N + P    +N +ID + + G +++  ++++EM+E   KP+ V++  +
Sbjct: 423 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 482

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   C  G++ EA++I + M      P+    N++I   ++ G  ++AF ++++
Sbjct: 483 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 536



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 191/399 (47%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G       + D M S   +P+            R G   A   L  + 
Sbjct: 268 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKS 327

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT+  +  + LLN L K      A  + +        P    +N LI G  + GE+
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M S    PD +TYN LI+GLC+   +    +LL E++  +  +P V T+ +
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ-DNGVNPTVETFNT 446

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G+++K   + +EM   G+KP+ V++  +++ F K G +  A  + + M    
Sbjct: 447 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 506

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+   ++++ID Y  +G  +Q   L ++MK   +SP++ T+ +LI  LC ++++++A 
Sbjct: 507 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 566

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  L  + L+P    YN +I   C  GN+D+A  +   M +   K    T+  LI G 
Sbjct: 567 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 626

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
              GR++E   ++ KM++    P +   N ++    K G
Sbjct: 627 GGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 665



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 161/316 (50%), Gaps = 2/316 (0%)

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP-DIVTYNTLISGLCRVNEVARG 315
           ++PDT+ +N  +Q     G++ +A      MG  G  P +  +YN +I+G+ R       
Sbjct: 156 ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 215

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            E+  E+  ++   P+ +TY ++I G+ K G ++    + ++M   G+KP+A+T+NVL+ 
Sbjct: 216 VEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLS 274

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  + G M     + + M S   +PD  T+S L DG  RNG     L L  +     ++ 
Sbjct: 275 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTI 334

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
             YT +IL+N LCK+ +++ A   L+ L    LVP   +YN +I+G+C+ G ++ A    
Sbjct: 335 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M+ +  KPD +T+  LI G C   R+  A  +  +M   G  P   T N+LI    + 
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454

Query: 556 GMPNEAFRIMQRASED 571
           G   + F ++    E+
Sbjct: 455 GQLEKCFIVLSEMQEN 470



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 164/349 (46%), Gaps = 1/349 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++  LC+ G     + V   + + G +P   +    ++   + G+ + A     Q 
Sbjct: 338 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 397

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +      YN+L+N L K      A  +  E       P   TFN LI    R G++
Sbjct: 398 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 457

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K F    +M   G  P++V+Y ++++  C+  ++     +L ++ F  +  P+   Y +
Sbjct: 458 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-FHKDVLPNAQVYNA 516

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G  D+A  +  +M S GI PS VT+N+LI G      +  AE +   + +  
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD V++++LI   C  G +++ L L   M    +   V T+  LI+ L    RL +  
Sbjct: 577 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEME 636

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
              +++  N++VP   ++N +++ + K GN  +A  +  EM +KR   D
Sbjct: 637 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 685



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 1/243 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N + +T+N ++ +    G  +   +V   M+ +G  PN       V++  + GK   A 
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +L      +V  +  +YN++++A V+    D+A  + ++       P   T+N+LI+GL
Sbjct: 497 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
               ++ +A E    + +    PD V+YNTLIS  C    + +  +L + +  K      
Sbjct: 557 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM-HKYGIKST 615

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TY  +ISG    G++ +   +Y +M    + PS    N++++ + K GN + AE +R+
Sbjct: 616 VRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 675

Query: 392 RML 394
            ML
Sbjct: 676 EML 678



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP--FMYNPVIDGFCKAGNVDEAN 492
           P+ + +   + A      L +A   L+++   D  P P  F YN VI G  +AG   +A 
Sbjct: 158 PDTFAWNKAVQACVAAGDLGEAVGMLRRM-GRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 216

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  EM E+   P+ +T+  +I GH   G +    S+ ++M+  G  P+ IT N L+S L
Sbjct: 217 EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGL 276

Query: 553 LKGGMPNEAFRIMQRASEDQ 572
            + G   E   ++   +  +
Sbjct: 277 CRAGRMGETSALLDEMASQK 296


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 218/456 (47%), Gaps = 47/456 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +M  LC  G       + D M  +GH P++      V+   + G   +A  +L + 
Sbjct: 12  TFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++  +  +Y+++++ L K  N  +A  +F E       P+  T+N +I G    G+ 
Sbjct: 72  DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   DM      PD+VT++ LI+   +  +V+   EL +E+  ++ F P  +TY+S
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF-PTTITYSS 190

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG-----------FGKVGNMVSA 386
           +I G+CK  +++ A  +++ M S G  P  +T N LIDG           F +VGN+  A
Sbjct: 191 MIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVA 250

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + + + M+S G  PD+VT ++L+ G C NG+L + L++    +   +  +  T  I+IN 
Sbjct: 251 QDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIING 310

Query: 447 LCKENRLNDARRFLKQLKWN-----------------------------------DLVPK 471
           +CK N++++A      L  N                                    ++P 
Sbjct: 311 MCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPS 370

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN ++DGFCK   ++EA  +V  M  + C PD VTF+ LI G+C  GR+ + + +F+
Sbjct: 371 TVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFS 430

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +M + G   D IT N+LI    K G  N A  I + 
Sbjct: 431 EMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEE 466



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 199/390 (51%), Gaps = 14/390 (3%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++   C  G   D+ Q++ D +  +   P+       +++ ++ GK   A+ L  +
Sbjct: 117 TYNCMIDGYCSYGKWSDAEQLLRDMIERNID-PDVVTFSALINAFVKEGKVSGAEELYRE 175

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR--- 273
                +  +T  Y+S+++   K +  ++A +MF         PD  T N LI G  R   
Sbjct: 176 MLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKR 235

Query: 274 --------IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
                   +G V  A + F +M S G SPDIVT NTL++GLC   ++ +  E+ K V  K
Sbjct: 236 HLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFK-VFQK 294

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           S+   D  T   +I+G CK  K+D+A  ++N +   G++   VT+N+LI  F K GN + 
Sbjct: 295 SKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLR 354

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           AE +   ML  G +P  VT++S++DG+C+  +L +  ++ D M  +  SP+V TF+ LI 
Sbjct: 355 AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             CK  R++D      ++    LV     YN +I GFCK G+++ A  I  EM      P
Sbjct: 415 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCP 474

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           D +TF  ++ G C K  + + +++   + +
Sbjct: 475 DTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 214/447 (47%), Gaps = 26/447 (5%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           +C+    +++L +++++D  ++        + N+ +      Y+ ++  LC+ G H   Q
Sbjct: 55  MCKLGDTVSALNMLRKMDESQI--------KANVVI------YSAIVDRLCKDGNHIKAQ 100

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            +F  M   G  PN       +      GK   A+ LL       +      +++L+NA 
Sbjct: 101 NIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAF 160

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
           VK+     A  +++E  R    P T T++ +I G  +   ++ A   F  M S GCSPDI
Sbjct: 161 VKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDI 220

Query: 297 VTYNTLISGLCR-----------VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +T NTLI G CR           V  V    +L +E+   +  SPD+VT  ++++G C+ 
Sbjct: 221 ITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEM-ISNGVSPDIVTCNTLLAGLCEN 279

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           GK++KA  ++       +     T N++I+G  K   +  A  +   +   G   DVVT+
Sbjct: 280 GKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTY 339

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           + LI  + + G   +   +  EM  K + P+  T+  +++  CK+NRL +AR+ +  +  
Sbjct: 340 NILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVS 399

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    ++ +I G+CKAG VD+   + +EM ++    D +T+  LI G C  G +  
Sbjct: 400 EGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNG 459

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCL 552
           A  IF +M+  G  PD IT  S+++ L
Sbjct: 460 AQDIFEEMVSSGVCPDTITFRSMLAGL 486



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 160/299 (53%), Gaps = 15/299 (5%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   GC  ++VT+ TL++GLCR   V +   L+  +  +    PD VTY ++++G CKLG
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRM-VEEGHQPDAVTYGTIVNGMCKLG 59

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
               A  +  +M+   IK + V ++ ++D   K GN + A+ +   M   G  P+V+T++
Sbjct: 60  DTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            +IDGYC  G+ +   +L  +M  +N+ P+V TF+ LINA  KE +++ A    +++   
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI-----------LII 515
           ++ P    Y+ +IDGFCK   +++A  +   M  K C PD +T              LI 
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASED 571
           G C  G +  A  +F +M+  G +PD +T N+L++ L + G   +A   F++ Q++  D
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMD 298



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 45/75 (60%)

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M E  C  + VTFT L+ G C +GR+++A+++ ++M+  G  PD +T  ++++ + K G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 558 PNEAFRIMQRASEDQ 572
              A  ++++  E Q
Sbjct: 61  TVSALNMLRKMDESQ 75


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 202/405 (49%), Gaps = 4/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++++LC  G       +FD M S    P+       V       + + A  LLS+ 
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + ++   Y S++  L  +    +AV + ++        D   F  ++ G  R G++
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +F +M   G + D VTY  LI+GLCR  E+     +L+E++ K     D VTYT 
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG-LDVDAVTYTV 430

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK+GKM +A  ++N+M    + P+ VT+  L DG  K G++ +A  +   M S G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++ T++SLI+G C+ G L Q ++   +M    L P+VYT+T +I ALC+   L+ A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    + P    YN +++GFC +G V+    ++  M EK   P+  T+  L+  +
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C++  M     I+  ML     P++ T N LI    K     EA 
Sbjct: 611 CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 183/367 (49%), Gaps = 41/367 (11%)

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA++ +   DEAV +F+E      + +T ++NIL++ L   G +K A + F +M S    
Sbjct: 230 NAVLCRLPLDEAVQLFQEL----PEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---P 282

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSP---------------------- 330
           PD+VTY  ++ G C ++E+    +LL E+  +  E +P                      
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 331 -----------DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
                      D   +T+V+SG+C+ G +  A   ++EM   G+    VT+  LI+G  +
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +  AE + + M   G   D VT++ LIDGYC+ G++ +   + ++M  K ++PNV T
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T L + LCK+  +  A   L ++    L    F YN +I+G CKAGN+++A   + +M+
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E   KPD  T+T +I   C    +  A S+  +ML  G  P  +T N L++     G   
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 560 EAFRIMQ 566
              R+++
Sbjct: 583 GGKRLLE 589



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 172/360 (47%), Gaps = 39/360 (10%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  YN LL AL       +A  +F E   + S PD  T+ I++ G   + E++ A +  
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 285 YDMGSFGCSPDIVTYN-----------------------------------TLISGLCRV 309
            +M + G   + V Y                                    T++SG CR 
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++A       E++ K   + D VTYT++I+G C+ G++ +A  +  EM   G+   AVT
Sbjct: 369 GDLAAARNWFDEMQ-KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           + VLIDG+ KVG M  A  +  +M+     P+VVT+++L DG C+ G +    +L  EM 
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K L  N++T+  LIN LCK   L  A R +  +    L P  + Y  +I   C++  +D
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A+ ++ EM +K  KP  VT+ +L+ G CM GR+     +   ML     P+  T NSL+
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 1/343 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC  G     + V   M   G   ++      +    + GK   A  + ++ 
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT +   Y +L + L KQ +   A  +  E      + + +T+N LI GL + G +
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     DM   G  PD+ TY T+I  LC+  E+ R H LL+E+  K    P +VTY  
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNV 570

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G+C  G+++    +   M    I P+  T+N L+  +    NM S   + + MLS  
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+  T++ LI G+C+   + + L    EM  K       ++  LI  L K+ +  +AR
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           R  ++++ + L  +P +YN  ID      N++    +  E+ E
Sbjct: 691 RLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 396 FGYLPD--VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           F  LP+    +++ L+   C  G++    +L DEM      P+V T+ I+++  C  + L
Sbjct: 245 FQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSEL 301

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A + L ++    L   P  Y  VI   C  G V +A  +V +M       D   FT +
Sbjct: 302 ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTV 361

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           + G C KG +  A + F++M + G A D +T  +LI+ L + G   EA R++Q   ED+ 
Sbjct: 362 MSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM-EDKG 420

Query: 574 LQL 576
           L +
Sbjct: 421 LDV 423


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 202/405 (49%), Gaps = 4/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++++LC  G       +FD M S    P+       V       + + A  LLS+ 
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + ++   Y S++  L  +    +AV + ++        D   F  ++ G  R G++
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +F +M   G + D VTY  LI+GLCR  E+     +L+E++ K     D VTYT 
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG-LDVDAVTYTV 430

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK+GKM +A  ++N+M    + P+ VT+  L DG  K G++ +A  +   M S G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++ T++SLI+G C+ G L Q ++   +M    L P+VYT+T +I ALC+   L+ A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    + P    YN +++GFC +G V+    ++  M EK   P+  T+  L+  +
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQY 610

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C++  M     I+  ML     P++ T N LI    K     EA 
Sbjct: 611 CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 183/367 (49%), Gaps = 41/367 (11%)

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA++ +   DEAV +F+E      + +T ++NIL++ L   G +K A + F +M S    
Sbjct: 230 NAVLCRLPLDEAVQLFQEL----PEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---P 282

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSP---------------------- 330
           PD+VTY  ++ G C ++E+    +LL E+  +  E +P                      
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRV 342

Query: 331 -----------DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
                      D   +T+V+SG+C+ G +  A   ++EM   G+    VT+  LI+G  +
Sbjct: 343 VEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCR 402

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +  AE + + M   G   D VT++ LIDGYC+ G++ +   + ++M  K ++PNV T
Sbjct: 403 AGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVT 462

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T L + LCK+  +  A   L ++    L    F YN +I+G CKAGN+++A   + +M+
Sbjct: 463 YTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD 522

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E   KPD  T+T +I   C    +  A S+  +ML  G  P  +T N L++     G   
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582

Query: 560 EAFRIMQ 566
              R+++
Sbjct: 583 GGKRLLE 589



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 172/360 (47%), Gaps = 39/360 (10%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  YN LL AL       +A  +F E   + S PD  T+ I++ G   + E++ A +  
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDE---MASPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 285 YDMGSFGCSPDIVTYN-----------------------------------TLISGLCRV 309
            +M + G   + V Y                                    T++SG CR 
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++A       E++ K   + D VTYT++I+G C+ G++ +A  +  EM   G+   AVT
Sbjct: 369 GDLAAARNWFDEMQ-KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           + VLIDG+ KVG M  A  +  +M+     P+VVT+++L DG C+ G +    +L  EM 
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K L  N++T+  LIN LCK   L  A R +  +    L P  + Y  +I   C++  +D
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A+ ++ EM +K  KP  VT+ +L+ G CM GR+     +   ML     P+  T NSL+
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 1/343 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC  G     + V   M   G   ++      +    + GK   A  + ++ 
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT +   Y +L + L KQ +   A  +  E      + + +T+N LI GL + G +
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     DM   G  PD+ TY T+I  LC+  E+ R H LL+E+  K    P +VTY  
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG-IKPTIVTYNV 570

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G+C  G+++    +   M    I P+  T+N L+  +    NM S   + + MLS  
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+  T++ LI G+C+   + + L    EM  K       ++  LI  L K+ +  +AR
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           R  ++++   L  +P +YN  ID      N++    +  E+ E
Sbjct: 691 RLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 6/183 (3%)

Query: 396 FGYLPD--VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           F  LP+    +++ L+   C  G++    +L DEM      P+V T+ I+++  C  + L
Sbjct: 245 FQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSEL 301

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A + L ++    L   P  Y  VI   C  G V +A  +V +M       D   FT +
Sbjct: 302 ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTV 361

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           + G C KG +  A + F++M + G A D +T  +LI+ L + G   EA R++Q   ED+ 
Sbjct: 362 MSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM-EDKG 420

Query: 574 LQL 576
           L +
Sbjct: 421 LDV 423


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/417 (32%), Positives = 205/417 (49%), Gaps = 40/417 (9%)

Query: 197 FVSSCIRAGKCD---AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
           F +  ++ GK D   +A+ + +Q     V  S   +N+++N L K+    EAV +F + F
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           +    PD +T+  LI G  R  ++ KAFE F  M   GC+P+ VTY+TLI+GLC    + 
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              ++L+E+  K    P V TYT  IS  C +G++D A  +   M   G  PS  T+  +
Sbjct: 285 EAMDMLEEMTEKG-IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G  + G M  A  M  +ML  G +P+ VT+++LI+  C  G+    LK+ D M+G   
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 434 -----------------------------------SPNVYTFTILINALCKENRLNDARR 458
                                              SP V T+  LI    K   LN+A R
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           FL  +K ++  P    Y  +I GFCK G +D A     EM +    P++ T+T +I G+C
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +G++  A+S+F +M   GC+    T N++IS L KG   +EA +   + +E Q LQ
Sbjct: 524 KEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE-QGLQ 579



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 192/417 (46%), Gaps = 9/417 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T+N ++  LC+ G      +VF+ +      P++      +    R  K D A  + 
Sbjct: 196 SLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF 255

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +        ++  Y++L+N L  +    EA+ M +E      +P  +T+ + I  L  I
Sbjct: 256 DRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDI 315

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN--EVARG--HELLKEVKFKSEFSP 330
           G V  A      MG  GCSP + TY  +ISGL R    E+A G  H++LKE        P
Sbjct: 316 GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE-----GLVP 370

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           + VTY ++I+  C  G+   A  I++ M   G   +A T+N +I G   + ++  A  + 
Sbjct: 371 NTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVF 430

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            +ML  G  P VVT+++LI    + G LN   +    MK  N  P+  T+  LI+  CK 
Sbjct: 431 NKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKG 490

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            +L+ A  F  ++    + P  + Y  +IDG+CK G +D A  +   MEE  C     T+
Sbjct: 491 GKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETY 550

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +I G     R  EA     KM   G  P+ IT  SLI+ L K    N AF+I   
Sbjct: 551 NAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 201/447 (44%), Gaps = 38/447 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C     D    VFD M  DG  PNS      ++     G+   A  +L + 
Sbjct: 234 TYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEM 293

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + + Y   +++L      D+A+ + +   +    P   T+  +I GL R G++
Sbjct: 294 TEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKM 353

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---------RVNEVARGHELLKEVK----- 323
           + A   ++ M   G  P+ VTYN LI+ LC         ++ +   GH  L   +     
Sbjct: 354 ELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI 413

Query: 324 --------------------FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                                K   SP VVTY ++I    K G ++ AT     M     
Sbjct: 414 IKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNC 473

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P   T+  LI GF K G + SA      ML  G  P+  T++++IDGYC+ G+++  L 
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALS 533

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L + M+    S ++ T+  +I+ L K NR ++A +F  ++    L P    Y  +I+G C
Sbjct: 534 LFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLC 593

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K    + A  I  EME+K C P+  T+T LI G C +G++  A     ++   GC P   
Sbjct: 594 KNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTID 649

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASE 570
           T ++L+S L + G  NEA ++++   E
Sbjct: 650 TYSTLVSGLCREGRSNEASQLVENMKE 676



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 196/441 (44%), Gaps = 9/441 (2%)

Query: 138 LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           + LK  ++   + +L ++ +TYN +++ L  M   +   VVF+ M  DG  P        
Sbjct: 390 IALKIFDWMEGHGTLANA-QTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +   ++ G  + A   L   +          Y  L++   K    D A   F E  +   
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P+ WT+  +I G  + G++  A   F  M   GCS  I TYN +ISGL + N  +   +
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK 568

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
              ++  +    P+ +TYTS+I+G CK    + A  I++EM      P+A T+  LI G 
Sbjct: 569 FCAKMT-EQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGL 627

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G + +AE + E     G  P + T+S+L+ G CR G+ N+  +L + MK K LSP++
Sbjct: 628 CQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSM 683

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
             +  L+ A CK  +++ A      +      P  F+Y  +I   C     +EA  I   
Sbjct: 684 EIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQS 743

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           + +K+   D + +T+L+ G   +G     +     M    C P   T   L   L K G 
Sbjct: 744 LLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803

Query: 558 PNEAFRIMQRASEDQNLQLPS 578
                +I  R  E   + LPS
Sbjct: 804 SIGTDQIGNRLRE---VSLPS 821



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 181/393 (46%), Gaps = 36/393 (9%)

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           +S    G    + + +N+LL  L K +    A  ++ + F    +P   TFN +I  L +
Sbjct: 150 ISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCK 209

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G+V++A   F  +  F   PD  TY +LI G CR  ++ +  E+   +  K   +P+ V
Sbjct: 210 KGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRM-VKDGCNPNSV 268

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+++I+G C  G++ +A  +  EM   GI+P+  T+ V I     +G +  A  +   M
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P V T++++I G  R G++   + +  +M  + L PN  T+  LIN LC E R 
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRF 388

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-------------------NVI 494
             A +    ++ +  +     YN +I G     ++++A                   N +
Sbjct: 389 GIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448

Query: 495 VAE----------------MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           + E                M+E  C+PD+ T+  LI G C  G++  A S F +ML+ G 
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +P+  T  ++I    K G  + A  + +R  E+
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEEN 541



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 85/155 (54%), Gaps = 1/155 (0%)

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           +Y+F  L+  L K + +  A+    Q+  + + P    +N +I+  CK G V EA ++  
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++ +    PD  T+T LI+GHC   ++ +A  +F++M++ GC P+ +T ++LI+ L   G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 557 MPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNTDI 591
              EA  +++  +E + ++   +   VP+ +  DI
Sbjct: 282 RIGEAMDMLEEMTE-KGIEPTVYTYTVPISSLCDI 315


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 205/398 (51%), Gaps = 3/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ GL      +++ M + G  P        +    + GK   A+  LS  
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY-FRLYSQPDTWTFNILIQGLSRIGE 276
               +      YN+L+    +  N  EA  +  E  FR  S  +  T+N LI GL R+G+
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSF-NIVTYNTLIDGLCRLGD 427

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++ A +   DM + G  PD+VTY  L++G C++  +    E   E+      +PD   YT
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM-LHVGLAPDQFAYT 486

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           + I G  KLG   KA  +  EM + G  P  +T+NV ++G  K+GN+  A  + ++M+  
Sbjct: 487 ARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD 546

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G++PD VT++S +  +  NG L +G ++  +M  +  +P V T+T+LI+A     RL+ A
Sbjct: 547 GHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWA 606

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             +  +++   +VP    YN +I+GFCK   +D+A     EM+EK   P+K T+TILI  
Sbjct: 607 MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINE 666

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +C  G+  EA+ ++ +ML     PD  T  +L+  L K
Sbjct: 667 NCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDK 704



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 204/426 (47%), Gaps = 34/426 (7%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           SF+ Y +V   L    L+    +VF+ M  +  LP+       V +C R  K    K LL
Sbjct: 167 SFEMYGIV-DVLIGGYLNYQCLLVFEKMMRNRFLPD-------VKNCNRILKILRDKNLL 218

Query: 215 SQ------------FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
            +             RP   T     YN++L++  K      A+ +  +       P   
Sbjct: 219 VKALEVYRMMGEYGIRPTVTT-----YNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEV 273

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           TFN+LI GLS+ GE+++A     +M   G      TYN LI G C+   +     L +E+
Sbjct: 274 TFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEM 333

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +   SP V ++ +++ G+CK GKM  A    ++M    + P  +++N LI GF ++GN
Sbjct: 334 VTRG-VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392

Query: 383 MVSA----EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           +  A    + +R R LSF    ++VT+++LIDG CR G L   LKL ++M  + + P+V 
Sbjct: 393 IGEAFILLDELRFRNLSF----NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVV 448

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+T+L+N  CK   +  A+ F  ++    L P  F Y   I G  K G+  +A  +  EM
Sbjct: 449 TYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K   PD +T+ + + G C  G + EA  +  KM+R G  PD +T  S +   ++ G  
Sbjct: 509 LTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHL 568

Query: 559 NEAFRI 564
            E   I
Sbjct: 569 REGREI 574



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 177/323 (54%), Gaps = 1/323 (0%)

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           + + +F++  R    PD    N +++ L     + KA E +  MG +G  P + TYNT++
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
              C+  EV R  +L+ +++ +  + P  VT+  +I+G  K G++ +A G+  EM   G+
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCY-PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGL 303

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           + S  T+N LI G+ K G +V A  + E M++ G  P V + ++++ G+C+ G+++   +
Sbjct: 304 RVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQ 363

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
              +M  KNL P++ ++  LI   C+   + +A   L +L++ +L      YN +IDG C
Sbjct: 364 QLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC 423

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           + G+++ A  +  +M  +   PD VT+T+L+ G C  G M+ A   F++ML +G APD  
Sbjct: 424 RLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQF 483

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
              + I   LK G   +AF++ +
Sbjct: 484 AYTARIVGELKLGDTAKAFKLQE 506



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 1/342 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L  L  +N   +A+ +++       +P   T+N ++    + GEV++A +    M  
Sbjct: 206 NRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQE 265

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            GC P  VT+N LI+GL +  E+ +   L++E+  K+       TY  +I GYCK G + 
Sbjct: 266 RGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMA-KAGLRVSPYTYNPLICGYCKKGLLV 324

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  ++ EM + G+ P+  + N ++ GF K G M  A      ML    +PD++++++LI
Sbjct: 325 EALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLI 384

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            G+CR G + +   L DE++ +NLS N+ T+  LI+ LC+   L  A +  + +    + 
Sbjct: 385 YGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIH 444

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  +++G CK GN+  A     EM      PD+  +T  I+G    G   +A  +
Sbjct: 445 PDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKL 504

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +ML  G  PD IT N  ++ L K G   EA  ++Q+   D
Sbjct: 505 QEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD 546



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 4/315 (1%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NLS N    TYN ++  LC +G  ++   + + M + G  P+       V+   + G   
Sbjct: 407 NLSFN--IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNML 464

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            AK    +     +    F Y + +   +K  +  +A  + +E       PD  T+N+ +
Sbjct: 465 MAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFV 524

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL ++G +++A E    M   G  PD VTY + +        +  G E+  ++  + + 
Sbjct: 525 NGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQ- 583

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P VVTYT +I  +   G++D A   + EM   G+ P+ +T+NVLI+GF KV  M  A  
Sbjct: 584 TPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACK 643

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
               M   G  P+  T++ LI+  C  G+  + L+L  +M GK + P+  T   L+  L 
Sbjct: 644 FFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLD 703

Query: 449 KENRLNDARRFLKQL 463
           K+ ++  A +F++ L
Sbjct: 704 KDYKVQ-AVQFIESL 717



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 111/234 (47%), Gaps = 5/234 (2%)

Query: 164 RSLCEMGLHDSVQV--VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-FRPG 220
           R + E+ L D+ +   + + M + G  P+      FV+   + G  + A  LL +  R G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
            V      Y S ++A ++  +  E   +F +       P   T+ +LI   +  G +  A
Sbjct: 548 HVP-DHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWA 606

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
             +F +M   G  P+++TYN LI+G C+V ++ +  +   E++ K  F P+  TYT +I+
Sbjct: 607 MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIF-PNKYTYTILIN 665

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
             C +GK  +A  +Y +M    I+P + T   L+    K   + + +++   +L
Sbjct: 666 ENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLIL 719


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 194/407 (47%), Gaps = 1/407 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + L L  S  TY+ ++R  CE G  +    + + M S G +P        +    + G+ 
Sbjct: 264 LRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRV 323

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A+ LL       +      YN+L+    +  N  EA  +F E       P   T+N L
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTL 383

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL R+G++  A     +M   G  PD+ T+ T + G C++  +    EL  E+     
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEM-LNRG 442

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD   Y + I G  KLG   KA G+  EM + G  P  +T+NV IDG  K+GN+  A 
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + ++ML  G +PD VT++S+I  +   G L +   L  EM  K + P+V T+T+LI++ 
Sbjct: 503 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSY 562

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
               RL  A     ++    + P    YN +I+G CK   +D+A    AEM+ K   P+K
Sbjct: 563 AVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNK 622

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            T+TILI  +C  G   EA+ ++  ML     PD  T  SL+  L K
Sbjct: 623 YTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 222/443 (50%), Gaps = 17/443 (3%)

Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++ S C+ G+  +++Q++F  M++ G  PN       V+    +G+ + AK L+  
Sbjct: 204 TYNTMLDSFCKKGMVQEALQLLFQ-MQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQD 262

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + +S + Y+ L+    ++   +EA  + +E     + P   T+N ++ GL + G 
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGR 322

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A +    M +    PD+V+YNTLI G  R+  +     L  E++++S  +P VVTY 
Sbjct: 323 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS-LAPSVVTYN 381

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G C+LG +D A  + +EM   G  P   TF   + GF K+GN+  A+ + + ML+ 
Sbjct: 382 TLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNR 441

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD   + + I G  + G  ++   + +EM  +   P++ T+ + I+ L K   L +A
Sbjct: 442 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEA 501

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              +K++ +N LVP    Y  +I     AG++ +A  +  EM  K   P  VT+T+LI  
Sbjct: 502 SELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHS 561

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE------ 570
           + ++GR+  AI  F +M   G  P+ IT N+LI+ L K    ++A+              
Sbjct: 562 YAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPN 621

Query: 571 --------DQNLQLPSWKKAVPL 585
                   ++N  L  W++A+ L
Sbjct: 622 KYTYTILINENCNLGHWQEALRL 644



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 206/432 (47%), Gaps = 26/432 (6%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           + P + L+F  ++        S  +Y++++  L   GL  S   V               
Sbjct: 59  NRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCV--------------- 103

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST--FMYNSLLNALVKQNNADEAVYMFKE 251
           +E  VS  +  G  D            EV+M +   + + LL   VK++  ++ + +F +
Sbjct: 104 MEKVVSVKMENGVIDVVSS-------SEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYK 156

Query: 252 YFRLYSQPDTWTFNILIQGL-SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
                  PD    N +++ L  R   +  A E +  M   G  P +VTYNT++   C+  
Sbjct: 157 MVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKG 216

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
            V    +LL +++     SP+ VTY  +++G    G+M++A  +  +M   G++ S  T+
Sbjct: 217 MVQEALQLLFQMQAMG-CSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTY 275

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           + LI G+ + G +  A  + E MLS G +P VVT+++++ G C+ G+++   KL D M  
Sbjct: 276 DPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVN 335

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           KNL P++ ++  LI    +   + +A     +L++  L P    YN +IDG C+ G++D 
Sbjct: 336 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDV 395

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +  EM +    PD  TFT  + G C  G +  A  +F++ML  G  PD     + I 
Sbjct: 396 AMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIV 455

Query: 551 CLLKGGMPNEAF 562
             LK G P++AF
Sbjct: 456 GELKLGDPSKAF 467



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 150/329 (45%), Gaps = 4/329 (1%)

Query: 132 RLDNPKLGLKFLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           RL N  +G  FL F+ +   SL  S  TYN ++  LC +G  D    + D M   G  P+
Sbjct: 354 RLGN--IGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPD 411

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                 FV    + G    AK L  +     +    F Y + +   +K  +  +A  M +
Sbjct: 412 VFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQE 471

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E       PD  T+N+ I GL ++G +K+A E    M   G  PD VTY ++I       
Sbjct: 472 EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 531

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
            + +   L  E+  K  F P VVTYT +I  Y   G++  A   + EM+  G+ P+ +T+
Sbjct: 532 HLRKARALFLEMLSKGIF-PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 590

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N LI+G  KV  M  A      M + G  P+  T++ LI+  C  G   + L+L  +M  
Sbjct: 591 NALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 650

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRF 459
           + + P+  T   L+  L K+ +L+  R  
Sbjct: 651 REIQPDSCTHRSLLKHLNKDYKLHVVRHL 679


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 208/410 (50%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC   L D    +   M   G +P+    +  ++      +   AK +L + 
Sbjct: 252 TYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 311

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      YN+L++  ++Q + ++A  +  E      + +   +N L+ G+ + G++
Sbjct: 312 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 371

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA E   +M   G  PD  TY+ LI G CR   +AR  ELL E+K K + +P V+TY+ 
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK-KRKLAPTVLTYSV 430

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C+ G +     I  EM   G+KP+AV +  L+    K G +  +  + ERM   G
Sbjct: 431 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 490

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV  ++SLI G+C+  ++ +      EM  + L PN +T+   I+   K   +  A 
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIAD 550

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R+  ++    ++P   +Y  +I+G CK GNV EA  +   +  +R   D  T+++LI G 
Sbjct: 551 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 610

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              G+M EA  IF+++   G  P+  T NSLIS   K G  ++A ++++ 
Sbjct: 611 SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 195/384 (50%), Gaps = 11/384 (2%)

Query: 183 RSDGHLPNSPMIEFFVSSCIRAG-KCDAAKGLLS----QFRPGEVTMSTFMYNSLLNALV 237
           RS    PNS + +  + S  + G   +A    L     +FRP     S    NSLL  L+
Sbjct: 137 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRP-----SLLSCNSLLGDLL 191

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K N  +    +F         PD +T+  +I    ++G VK A     +MG  GCSP++V
Sbjct: 192 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLV 251

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYN +I GLCR   +    EL + +  K    PD+ TY  +I+G+C   +  +A  +  E
Sbjct: 252 TYNVIIGGLCRARLLDEAIELKRSMVDKG-LVPDLYTYDILINGFCMEKRSREAKLMLLE 310

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G+KP  +T+N LIDGF + G++  A  +++ M++ G   +++ +++L++G C+ G+
Sbjct: 311 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 370

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + + L++  EM  K + P+  T+++LI   C+   +  A   L ++K   L P    Y+ 
Sbjct: 371 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 430

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G C+ GN+   N I+ EM     KP+ V +T L+  H  +GR+ E+  I  +M   G
Sbjct: 431 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 490

Query: 538 CAPDDITVNSLISCLLKGGMPNEA 561
             PD    NSLI    K     EA
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEA 514



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 222/455 (48%), Gaps = 36/455 (7%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+    +  +     M      PN+     F+    +AG+ + A    ++  
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  +  +Y +L+    K+ N  EA  +F+         D  T+++LI GLSR G++ 
Sbjct: 558 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 617

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AF  F ++   G  P+  TYN+LISG C+   V +  +LL+E+  K   +PD+VTY  +
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG-INPDIVTYNIL 676

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G++++A  +++++   G+ P+ VT+  ++DG+ K  N  +A  + E ML  G 
Sbjct: 677 IDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 736

Query: 399 LPD----------------------------------VVTFSSLIDGYCRNGQLNQGLKL 424
            PD                                   V+F++LI+GYC++G+L +   L
Sbjct: 737 PPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHL 796

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +EM  K   PN  T+T LI+  CK   + +A+R   +++  +++P    Y  ++ G+  
Sbjct: 797 LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHN 856

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            GN+ E + +  EM  K  +PDK+T+ ++I  +C +G ++EA  + +++L  G       
Sbjct: 857 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAA 916

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASEDQ-NLQLPS 578
            ++LI  L K     E  +++    E    L LP+
Sbjct: 917 YDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPT 951



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 222/459 (48%), Gaps = 34/459 (7%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           L+ S V+  L     TY++++   C        +++   M   G  P        +   +
Sbjct: 272 LKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFM 331

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           R G  + A  +  +     +  +  ++N+LLN + K    ++A+ + +E      +PD+ 
Sbjct: 332 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 391

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+++LI+G  R   + +AFE   +M     +P ++TY+ +I+GLCR   +   + +L+E+
Sbjct: 392 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 451

Query: 323 KF----------------------------------KSEFSPDVVTYTSVISGYCKLGKM 348
                                               +    PDV  Y S+I G+CK  +M
Sbjct: 452 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 511

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++A     EM    ++P+A T+   IDG+ K G M  A+     MLS G LP+V  +++L
Sbjct: 512 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 571

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G+C+ G + +   +   +  + +  +V T+++LI+ L +  ++++A     +L+   L
Sbjct: 572 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGL 631

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P  F YN +I G CK GNVD+A+ ++ EM  K   PD VT+ ILI G C  G +  A +
Sbjct: 632 LPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKN 691

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +F+ +   G  P+ +T  +++    K   P  AF++++ 
Sbjct: 692 LFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 730



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 193/389 (49%), Gaps = 1/389 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VFD M +   LP+       +S+  + G    AK +L +      + +   YN ++  L 
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           +    DEA+ + +        PD +T++ILI G       ++A     +M   G  P+ +
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYN LI G  R  ++ +   +  E+        +++ + ++++G CK GKM+KA  I  E
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEM-VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G++P + T+++LI+G  +  NM  A  + + M      P V+T+S +I+G CR G 
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L     +  EM    L PN   +T L+ A  KE R+ ++R  L++++   ++P  F YN 
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I GFCKA  ++EA   + EM E+R +P+  T+   I G+   G M  A   FN+ML  G
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             P+     +LI    K G   EAF + +
Sbjct: 561 VLPNVGIYTALIEGHCKEGNVTEAFSVFR 589



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 204/413 (49%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ + C++G     + V   M   G  PN       +    RA   D A  L    
Sbjct: 217 TYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSM 276

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + Y+ L+N    +  + EA  M  E   +  +P+  T+N LI G  R G++
Sbjct: 277 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDI 336

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++AF    +M + G   +++ +NTL++G+C+  ++ +  E+++E+  K    PD  TY+ 
Sbjct: 337 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG-VEPDSQTYSL 395

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+   M +A  + +EM    + P+ +T++V+I+G  + GN+     +   M+  G
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V +++L+  + + G++ +   + + M+ + + P+V+ +  LI   CK  R+ +AR
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            +L ++    L P    Y   IDG+ KAG ++ A+    EM      P+   +T LI GH
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 575

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C +G + EA S+F  +L      D  T + LI  L + G  +EAF I     E
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE 628



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 194/412 (47%), Gaps = 1/412 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++  +C+ G  +    +   M   G  P+S      +    R      A  LL + +
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++  +   Y+ ++N L +  N      + +E      +P+   +  L+   ++ G V+
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           ++      M   G  PD+  YN+LI G C+   +      L E+  +    P+  TY + 
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM-LERRLRPNAHTYGAF 536

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GY K G+M+ A   +NEM SCG+ P+   +  LI+G  K GN+  A  +   +LS   
Sbjct: 537 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 596

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           L DV T+S LI G  RNG++++   +  E++ K L PN +T+  LI+  CK+  ++ A +
Sbjct: 597 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L+++    + P    YN +IDG CKAG ++ A  +  ++E +   P+ VT+  ++ G+C
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                  A  +  +ML  G  PD    N +++   K     +A  + Q   E
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 197/448 (43%), Gaps = 72/448 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC  G       +   M  +G  PN+ +    +++  + G+ + ++ +L + 
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +    F YNSL+    K    +EA     E      +P+  T+   I G S+ GE+
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A  +F +M S G                                      P+V  YT+
Sbjct: 547 EIADRYFNEMLSCG------------------------------------VLPNVGIYTA 570

Query: 338 VISGYCKL-----------------------------------GKMDKATGIYNEMNSCG 362
           +I G+CK                                    GKM +A GI++E+   G
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P+A T+N LI G  K GN+  A  + E M   G  PD+VT++ LIDG C+ G++ +  
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L D+++G+ L+PN  T+  +++  CK      A + L+++    + P  F+YN +++  
Sbjct: 691 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 750

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK    ++A  +  EM EK      V+F  LI G+C  G++ EA  +  +M+     P+ 
Sbjct: 751 CKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 809

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +T  SLI    K GM  EA R+     E
Sbjct: 810 VTYTSLIDHNCKAGMMGEAKRLWLEMQE 837



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 168/341 (49%), Gaps = 2/341 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  D    + + M   G  P+       +    +AG+ + AK L    
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +   Y ++++   K  N   A  + +E       PD + +N+++    +  + 
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 756

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA + F +M   G +   V++NTLI G C+  ++   + LL+E+  + +F P+ VTYTS
Sbjct: 757 EKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEM-IEKQFIPNHVTYTS 814

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G M +A  ++ EM    + P+A T+  L+ G+  +GNM     + E M++ G
Sbjct: 815 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +T+  +ID YCR G + +  KL DE+  K +  +V  +  LI ALCK+    +  
Sbjct: 875 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVL 934

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           + L ++  +         + +  GF  AGN+DEA  ++  M
Sbjct: 935 KLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 177/346 (51%), Gaps = 1/346 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ++ +++ L+++  K     EAV +F        +P   + N L+  L +  +V+  ++ F
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 203

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M +    PD+ TY  +IS  C+V  V     +L E+  K   SP++VTY  +I G C+
Sbjct: 204 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKG-CSPNLVTYNVIIGGLCR 262

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
              +D+A  +   M   G+ P   T+++LI+GF        A+ M   M+  G  P+ +T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG+ R G + Q  ++ DEM    +  N+  +  L+N +CK  ++  A   ++++ 
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    Y+ +I+G C+  N+  A  ++ EM++++  P  +T++++I G C  G + 
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              +I  +M+  G  P+ +   +L++   K G   E+  I++R  E
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 186/424 (43%), Gaps = 33/424 (7%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++   C+ G       VF ++ S   L +       +    R GK   A G+ S+ +
Sbjct: 568 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + F YNSL++   KQ N D+A  + +E       PD  T+NILI GL + GE++
Sbjct: 628 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 687

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL------------------- 319
           +A   F D+   G +P+ VTY  ++ G C+        +LL                   
Sbjct: 688 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747

Query: 320 ----KEVKFKSEFS----------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
               KE KF+                 V++ ++I GYCK GK+ +A  +  EM      P
Sbjct: 748 NFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIP 807

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           + VT+  LID   K G M  A+ +   M     +P   T++SL+ GY   G +++   L 
Sbjct: 808 NHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALF 867

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           +EM  K + P+  T+ ++I+A C+E  + +A +   ++    +      Y+ +I   CK 
Sbjct: 868 EEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKK 927

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
               E   ++ E+ E   +    T +++  G  + G M EA  +   M++ G   +  ++
Sbjct: 928 EEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSL 987

Query: 546 NSLI 549
             L+
Sbjct: 988 GDLV 991



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 171/332 (51%), Gaps = 9/332 (2%)

Query: 230 NSLLNALVKQNNADEAVY--MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           + L+  +++ +++  AV   + K Y      P++  F++L+    ++G + +A   F   
Sbjct: 112 SDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGP 171

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV---KFKSEFSPDVVTYTSVISGYCK 344
            +F   P +++ N+L+  L + N+V    EL  +V       +  PDV TYT++IS +CK
Sbjct: 172 KNFEFRPSLLSCNSLLGDLLKGNKV----ELFWKVFDGMCAHKVLPDVYTYTNMISAHCK 227

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +G +  A  +  EM   G  P+ VT+NV+I G  +   +  A  ++  M+  G +PD+ T
Sbjct: 228 VGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYT 287

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +  LI+G+C   +  +   +  EM    L P   T+  LI+   ++  +  A R   ++ 
Sbjct: 288 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 347

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              +     ++N +++G CKAG +++A  I+ EM EK  +PD  T+++LI GHC    M 
Sbjct: 348 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 407

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            A  + ++M +   AP  +T + +I+ L + G
Sbjct: 408 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 439



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 165/347 (47%), Gaps = 2/347 (0%)

Query: 152  LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
            +N    TYN+++  LC+ G  +  + +FD +   G  PN       V    ++    AA 
Sbjct: 666  INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 725

Query: 212  GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             LL +     V    F+YN +LN   K+   ++A+ +F+E         T +FN LI+G 
Sbjct: 726  QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE-KGFASTVSFNTLIEGY 784

Query: 272  SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
             + G++++A     +M      P+ VTY +LI   C+   +     L  E++ ++   P 
Sbjct: 785  CKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN-VMPT 843

Query: 332  VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
              TYTS++ GY  +G M + + ++ EM + GI+P  +T+ V+ID + + GN++ A  +++
Sbjct: 844  AKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKD 903

Query: 392  RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
             +L  G    V  + +LI   C+  +  + LKL +E+        + T +++        
Sbjct: 904  EILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAG 963

Query: 452  RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
             +++A   L+ +     V        ++DG     N ++++ ++ +M
Sbjct: 964  NMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 22/297 (7%)

Query: 272 SRIGEVKKAFEFFY----DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +++G+ K+   FFY     MG+     D+   + L   LC  N      +L+K +   S+
Sbjct: 64  NQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSD 123

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SP +    S++  Y                 SC   P++V F++L+D + K+G +V A 
Sbjct: 124 -SP-LAVLGSIVKCY----------------RSCNGSPNSVIFDMLMDSYRKMGFLVEAV 165

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +     +F + P +++ +SL+    +  ++    K+ D M    + P+VYT+T +I+A 
Sbjct: 166 NVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAH 225

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK   + DA+R L ++      P    YN +I G C+A  +DEA  +   M +K   PD 
Sbjct: 226 CKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDL 285

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            T+ ILI G CM+ R  EA  +  +M+ +G  P+ IT N+LI   ++ G   +AFRI
Sbjct: 286 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRI 342


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 227/453 (50%), Gaps = 46/453 (10%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
           +N ++ SL +M  + +   +F  M+  G  P+   +   ++     G+   +  +L +  
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
              ++P  +T++T M    L   VK+     +++   +      Q D  ++  L+ GL +
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKK-----SLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           IGE + A +    +      P++V YNT+I GLC+   V   ++L  E+  +  F P+V+
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF-PNVI 186

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+++I G+C  G++ +A G+ NEM    I P+  T+ +L+D   K G +  A+ +   M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P+VV++++L+DGYC  G++    ++   M  K ++PNVY++ I+I+ LCK  R+
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG--------------------------- 486
           ++A   L+++   ++VP    Y+ +IDGFCK G                           
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366

Query: 487 --------NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
                   N+D+A  +  +M+E+  +P+K T+T LI G C  GR   A  +F  +L  GC
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGC 426

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +  T N +IS L K GM +EA  +  +  E+
Sbjct: 427 RINVWTYNVMISGLCKEGMLDEALAMKSKMEEN 459



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 209/445 (46%), Gaps = 36/445 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++   C +G       V   +   G+ PN+  +   +      G+   +     + 
Sbjct: 47  TLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKV 106

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 M    Y +LLN L K      A+ + +      ++P+   +N +I GL +   V
Sbjct: 107 VAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLV 166

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++ + +M + G  P+++TY+TLI G C   ++     LL E+  K+  +P+V TYT 
Sbjct: 167 NEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN-INPNVYTYTI 225

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK GK+ +A  +   M   G+KP+ V++N L+DG+  +G + +A+ M   M+  G
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285

Query: 398 -----------------------------------YLPDVVTFSSLIDGYCRNGQLNQGL 422
                                               +P+ VT+SSLIDG+C+ G++   L
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  EM  +    +V T+T L++ALCK   L+ A     ++K   + P  + Y  +IDG 
Sbjct: 346 DLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G    A  +   +  K C+ +  T+ ++I G C +G + EA+++ +KM   GC PD 
Sbjct: 406 CKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDA 465

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQR 567
           +T   +I  L +    ++A +++  
Sbjct: 466 VTFEIIIRSLFEKDQNDKAEKLLHE 490



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 170/343 (49%), Gaps = 1/343 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+  L +    ++  M + G  PN       +     AG+   A GLL++  
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + Y  L++AL K+    EA  +     +   +P+  ++N L+ G   IGEV+
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQ 272

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A + F+ M   G +P++ +YN +I  LC+   V     LL+EV  K+   P+ VTY+S+
Sbjct: 273 NAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKN-MVPNTVTYSSL 331

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CKLG++  A  +  EM   G     VT+  L+D   K  N+  A  +  +M   G 
Sbjct: 332 IDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+  T+++LIDG C+ G+     KL   +  K    NV+T+ ++I+ LCKE  L++A  
Sbjct: 392 QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALA 451

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
              +++ N  +P    +  +I    +    D+A  ++ EM  K
Sbjct: 452 MKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 162/343 (47%), Gaps = 34/343 (9%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---------- 308
           P    FN ++  L ++     A   F  M   G  PD+ T N LI+  C           
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 309 ---------------VNEVARGHELLKEVK---------FKSEFSPDVVTYTSVISGYCK 344
                          +N + +G  L  EVK             F  D V+Y ++++G CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +G+   A  +   +     +P+ V +N +IDG  K   +  A  +   M + G  P+V+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +S+LI G+C  GQL +   L +EM  KN++PNVYT+TIL++ALCKE ++ +A+  L  + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    YN ++DG+C  G V  A  +   M +K   P+  ++ I+I   C   R+ 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           EA+++  ++L     P+ +T +SLI    K G    A  +++ 
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKE 350



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 126/243 (51%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P ++ +  ++    K+     A  ++ +M   GI+P   T N+LI+ F  +G M  +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  ++L  GY P+ +T ++L+ G C  G++ + L   D++  +    +  ++  L+N LC
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K      A + L+ ++     P   MYN +IDG CK   V+EA  + +EM+ +   P+ +
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T++ LI G C+ G+++EA  + N+M+     P+  T   L+  L K G   EA  ++   
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 569 SED 571
           +++
Sbjct: 247 TKE 249



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 1/283 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N +  TY ++M +LC+ G     + +   M  +G  PN       +      G+   A
Sbjct: 215 NINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNA 274

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K +        V  + + YN +++ L K    DEA+ + +E       P+T T++ LI G
Sbjct: 275 KQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDG 334

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             ++G +  A +   +M   G   D+VTY +L+  LC+   + +   L  ++K +    P
Sbjct: 335 FCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG-IQP 393

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +  TYT++I G CK G+   A  ++  +   G + +  T+NV+I G  K G +  A  M+
Sbjct: 394 NKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMK 453

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +M   G +PD VTF  +I       Q ++  KL  EM  K+L
Sbjct: 454 SKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 1/213 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           + V   +N +  +YN+++  LC+    D    +   +     +PN+      +    + G
Sbjct: 280 TMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLG 339

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           +  +A  LL +            Y SLL+AL K  N D+A  +F +      QP+ +T+ 
Sbjct: 340 RITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYT 399

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI GL + G  K A + F  +   GC  ++ TYN +ISGLC+   +     +  +++ +
Sbjct: 400 ALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME-E 458

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           +   PD VT+  +I    +  + DKA  + +EM
Sbjct: 459 NGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P +  F  ++ +L K      A    KQ++   + P  F  N +I+ FC  G +  +  
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ ++ +   +P+ +T   L+ G C+KG + +++   +K++  G   D ++  +L++ L 
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 554 KGGMPNEAFRIMQRASEDQN 573
           K G    A +++ R  ED++
Sbjct: 127 KIGETRSALKLL-RMIEDRS 145


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 205/403 (50%), Gaps = 5/403 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + V++ LC+ G  DS   + + M   G+ P+       ++   +A K   A+  L   
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 218 RPGEVTM--STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ-PDTWTFNILIQGLSRI 274
                T   S F YNSLLN+L K     +A  +F       S  PD  +++ILI G  +I
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            E+ +A + +  M    C P++ TYN  ++GL R   +A    + +E+   +  SPDV+T
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM-ISAGCSPDVIT 229

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+++I G+    K D+A  ++  M S G +P+AVT+N L+ G  K      A  +  +M+
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD VT+++L+ G+C  G++ Q +++ DEM  K   P+V  +  L+    +  +  
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTIL 513
           +AR+  + +   +  P    +N +IDG  KA  +D+A  +   ME+   C PD VT+  L
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 409

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           I G C + R+ EA+ +F ++ R+  +PD    N L+  +   G
Sbjct: 410 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 182/369 (49%), Gaps = 5/369 (1%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PD 260
           +AG+ D+A  LL              ++ L+N L K +   EA    +   R  S     
Sbjct: 61  KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS 120

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELL 319
            +++N L+  L +  +V +AF  F  M S     PD+V+Y+ LI G C+++E+ R  +L 
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           K++       P+V TY + ++G  + G++  A G+Y EM S G  P  +T++ LI GF  
Sbjct: 181 KQM-IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
                 A  + E M+S G  P+ VT++ L+ G C+  + ++  +L  +M  +   P+  T
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T L+   C   ++  A     ++      P    YN ++ GF +AG   EA  +   M 
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMP 558
            + CKPD V+  I+I G     R+ +A+ +F +M +  GC+PD +T NSLI  L      
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 419

Query: 559 NEAFRIMQR 567
           +EA ++ + 
Sbjct: 420 SEAMKVFKE 428



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 175/345 (50%), Gaps = 2/345 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           +S++  L K    D A+ + +   +    PD  T ++LI  L +  ++++A EF   M  
Sbjct: 53  HSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNR 112

Query: 290 FGCS--PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              +      +YN+L++ LC+  +V +   +   +  +    PDVV+Y+ +I G+CK+ +
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           + +A  +Y +M      P+  T+N  ++G  + G +  A+ + E M+S G  PDV+T+S+
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI G+    + +Q  +L + M  +   PN  T+  L++ LCKE++ ++A    +++    
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    Y  ++ GFC  G +++A  +  EM  K   PD V +  L+ G    G+  EA 
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            +F  M+   C PD ++ N +I  L K    ++A  + +R  +D 
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 397



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 177/348 (50%), Gaps = 5/348 (1%)

Query: 224 MSTFMYNSLLNALVKQ---NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           ++   + + L  L K      A EA    +E       P + T + +IQ L + G V  A
Sbjct: 9   LNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSA 68

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEFSPDVVTYTSVI 339
                 M   G  PD+ T++ LI+ LC+ +++    E L+ + +  S  +    +Y S++
Sbjct: 69  LSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLL 128

Query: 340 SGYCKLGKMDKATGIYNEMNS-CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +  CK  K+ +A  I++ M S   + P  V++++LIDGF K+  +  AE + ++M+    
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P+V T+++ ++G  R G++     + +EM     SP+V T++ LI+      + + A  
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + +      P    YN ++ G CK    DEA+ +  +M E+ C PDKVT+T L+ G C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             G++ +A+ +F++M+  G  PD +  N L+    + G P EA ++ Q
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 172/332 (51%), Gaps = 3/332 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN ++ SLC+         +F  M S+  + P+       +    +  +   A+ L  Q
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   YN+ LN L+++    +A  +++E       PD  T++ LI G S   +
Sbjct: 183 MIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARK 242

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E F  M S GC P+ VTYN L+ GLC+ ++    HEL +++  +    PD VTYT
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM-VERGCDPDKVTYT 301

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G+C +GK+++A  +++EM S G  P  V +N L+ GF + G    A  + + M+S 
Sbjct: 302 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLND 455
              PD V+ + +IDG  +  +L+  +++ + M+  +  SP++ T+  LI  LC E RL++
Sbjct: 362 ECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSE 421

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           A +  K++    L P P  +N +++    AG+
Sbjct: 422 AMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 129/306 (42%), Gaps = 47/306 (15%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           ++L+   +  TYN  +  L   G     Q V++ M S G  P+       +     A K 
Sbjct: 184 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKH 243

Query: 208 DAAKGLLSQF-----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           D A  L         RP  VT     YN LL+ L K++  DEA  +F++       PD  
Sbjct: 244 DQAHELFEAMISRGCRPNAVT-----YNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV 298

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+  L+ G   +G++++A E F +M S G  PD+V YN L+ G  R  +     +L  +V
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLF-QV 357

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVG 381
               E  PD V++  +I G  K  ++D A  ++  M    G  P  VT+N          
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN---------- 407

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
                                    SLI G C   +L++ +K+  E+    LSP+ + F 
Sbjct: 408 -------------------------SLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFN 442

Query: 442 ILINAL 447
           +L+ A+
Sbjct: 443 VLLEAM 448


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 227/443 (51%), Gaps = 21/443 (4%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNS 191
           +LGL  L FS     L   +     T+N +++ LC  G +H ++    D + + G   + 
Sbjct: 108 QLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHF-HDKVVAQGFHLDQ 166

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 ++   + G+  AA  LL +     V  +  MYN +++ + K    ++A      
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA------ 220

Query: 252 YFRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
            F LYSQ       PD +T+N LI G S + ++  A + F  M     +P++ T+N L+ 
Sbjct: 221 -FDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVD 279

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           G C+  +V     +L  +  K +  PDVVTY S++ GYC + K++KA  I++ M S G+ 
Sbjct: 280 GFCKEGKVNDAKVVL-AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVI 338

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
            +   +  +++GF K+  +  A  + E M     +P+VVT+SSLIDG C+ G++   LKL
Sbjct: 339 ANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKL 398

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEM  +   PN+ T++ +++ALCK + ++ A   L  LK   + P  + Y  +I G C+
Sbjct: 399 VDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQ 458

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           +G +++A  +  ++  K    D   +T++I G C KG   +A+++ +KM   GC P+  T
Sbjct: 459 SGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKT 518

Query: 545 VNSLISCLLKGGMPNEAFRIMQR 567
              +I  L +    + A ++++ 
Sbjct: 519 YELVILSLFEKDENDTAEKLLRE 541



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 208/416 (50%), Gaps = 1/416 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F T+N+++    ++GL+     +F  +   G+ P +      +      G    A     
Sbjct: 96  FFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHD 155

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +       +    Y +L+N L K      A+ + K       QP+   +N++I  + +  
Sbjct: 156 KVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAK 215

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V  AF+ +  M +    PD+ TYN LISG   V+++    +L  ++K K   +P+V T+
Sbjct: 216 LVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMK-KENINPNVYTF 274

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             ++ G+CK GK++ A  +   M    IKP  VT+N L+DG+  +  +  A+ + + M S
Sbjct: 275 NILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS 334

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G + +V  ++++++G+C+   +++ + L +EM+ + + PNV T++ LI+ LCK  R+  
Sbjct: 335 GGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFY 394

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A + + ++      P    Y+ ++D  CK  +VD+A  ++  ++++  +PD  T+TILI 
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIK 454

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G C  GR+ +A ++F  +L  G   D      +I      G  ++A  ++ +  ++
Sbjct: 455 GLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDN 510



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 192/414 (46%), Gaps = 36/414 (8%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P  +F   +SS ++A     A  L  Q     +    F +N L+N   +      + 
Sbjct: 57  PTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSF 116

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F +  +    P   TFN LI+GL   G + +A  F   + + G   D V+Y TLI+GL
Sbjct: 117 SIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGL 176

Query: 307 CRVNEVARGHELLKEVKFK----------------------------------SEFSPDV 332
           C+V  +    +LLK V  K                                      PDV
Sbjct: 177 CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDV 236

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY ++ISG+  + K++ A  ++N+M    I P+  TFN+L+DGF K G +  A+ +   
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+     PDVVT++SL+DGYC   ++N+   + D M    +  NV  +T ++N  CK   
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A    ++++   ++P    Y+ +IDG CK G +  A  +V EM ++   P+ VT++ 
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           ++   C    + +AI++   +   G  PD  T   LI  L + G   +A  + +
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 169/340 (49%), Gaps = 1/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++ ++C+  L +    ++  M +    P+       +S      K + A  L ++ +
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMK 263

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + +N L++   K+   ++A  +     +   +PD  T+N L+ G   I +V 
Sbjct: 264 KENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVN 323

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA + F  M S G   ++  Y T+++G C++  V     L +E++ + +  P+VVTY+S+
Sbjct: 324 KAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCR-KIIPNVVTYSSL 382

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CKLG++  A  + +EM+  G  P+ VT++ ++D   K  ++  A  +   +   G 
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD+ T++ LI G C++G+L     + +++  K  + +VY +T++I   C +   + A  
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            L +++ N  +P    Y  VI    +    D A  ++ EM
Sbjct: 503 LLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 2/238 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C +   +  + +FD M S G + N  +    V+   +    D A  L  + 
Sbjct: 308 TYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEM 367

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R  ++  +   Y+SL++ L K      A+ +  E       P+  T++ ++  L +   V
Sbjct: 368 RCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHV 427

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA     ++   G  PD+ TY  LI GLC+   +     + +++  K  ++ DV  YT 
Sbjct: 428 DKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG-YNLDVYAYTV 486

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN-VLIDGFGKVGNMVSAEYMRERML 394
           +I G+C  G  DKA  + ++M   G  P+A T+  V++  F K  N  + + +RE ++
Sbjct: 487 MIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIV 544



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 72/138 (52%)

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           KN +P  + F  ++++L K    + A    +Q++ N +    F +N +I+ F + G    
Sbjct: 55  KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           +  I A++ +K   P  +TF  LI G C+KG + +A+   +K++  G   D ++  +LI+
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 551 CLLKGGMPNEAFRIMQRA 568
            L K G    A ++++R 
Sbjct: 175 GLCKVGRITAALQLLKRV 192


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+S     SLLN         EAV +  + F +  QP+T TFN LI GL    +
Sbjct: 146 YEPDIVTLS-----SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M + GC PD+ TY T+++GLC+  ++     LLK+++ K +   DVV YT
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYT 259

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I   C    ++ A  ++ EM++ GI+P+ VT+N LI      G    A  +   M+  
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+VVTFS+LID + + G+L +  KL DEM  +++ P+++T++ LIN  C  +RL++A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +   + +   D  P    YN +I GFCKA  V+E   +  EM ++    + VT+  LI G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               G    A  IF KM+  G  PD IT + L+  L K G   +A  + +
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 1/408 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL +++   +YN+++   C          V   M   G+ P+   +   ++      +  
Sbjct: 108 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 167

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q    E   +T  +N+L++ L   N A EAV +         QPD +T+  ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G++  A      M       D+V Y T+I  LC    V     L  E+  K   
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG-I 286

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+VVTY S+I   C  G+   A+ + ++M    I P+ VTF+ LID F K G +V AE 
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M+     PD+ T+SSLI+G+C + +L++   + + M  K+  PNV T+  LI   C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+ +     +++    LV     YN +I G  +AG+ D A  I  +M      PD +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           T++IL+ G C  G++ +A+ +F  + +    PD  T N +I  + K G
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 208/446 (46%), Gaps = 42/446 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  L           + D M + G  P+       V+   + G  D A  LL + 
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY------------------------- 252
             G++     +Y ++++AL    N ++A+ +F E                          
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 253 ---FRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
               RL S        P+  TF+ LI    + G++ +A + + +M      PDI TY++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 303 ISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           I+G C   R++E     EL+       +  P+VVTY ++I G+CK  ++++   ++ EM+
Sbjct: 367 INGFCMHDRLDEAKHMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G+  + VT+N LI G  + G+   A+ + ++M+S G  PD++T+S L+DG C+ G+L 
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L + + ++   + P++YT+ I+I  +CK  ++ D       L    + P   +Y  +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
            GFC+ G  +EA+ +  EM+E    P+  T+  LI      G    +  +  +M   G  
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIM 565
            D  T++ +I+ L  G +      ++
Sbjct: 603 GDASTISMVINMLHDGRLEKSYLEML 628



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 174/365 (47%), Gaps = 1/365 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L  +        S   +N LL+A+ K N  D  + + +    L    D +++N
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ILI    R  ++  A      M   G  PDIVT ++L++G C    ++    L+ ++ F 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM-FV 178

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
            E+ P+ VT+ ++I G     K  +A  + + M + G +P   T+  +++G  K G++  
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + ++M       DVV ++++ID  C    +N  L L  EM  K + PNV T+  LI 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC   R +DA R L  +    + P    ++ +ID F K G + EA  +  EM ++   P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  T++ LI G CM  R+ EA  +F  M+   C P+ +T N+LI    K     E   + 
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 566 QRASE 570
           +  S+
Sbjct: 419 REMSQ 423



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 129/260 (49%), Gaps = 1/260 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S++    TY+ ++   C     D  + +F+ M S    PN       +    +A + +  
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +     +  +T  YN+L+  L +  + D A  +FK+       PD  T++IL+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G+++KA   F  +      PDI TYN +I G+C+  +V  G +L   +  K    P
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKP 533

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +V+ YT++ISG+C+ G  ++A  ++ EM   G  P++ T+N LI    + G+  ++  + 
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593

Query: 391 ERMLSFGYLPDVVTFSSLID 410
           + M S G++ D  T S +I+
Sbjct: 594 KEMRSCGFVGDASTISMVIN 613


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 200/393 (50%), Gaps = 1/393 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  L + G       +FD M     +PN       +   I+ G  ++   L SQ 
Sbjct: 190 SYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQM 249

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN LL+ L +     E   +  E       PD +T++IL  G SR G+ 
Sbjct: 250 LRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDS 309

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +     F +    G      T + L++GLC+  ++++  E+L+ +   S      V Y +
Sbjct: 310 QTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTL-VNSGLLQTTVIYNT 368

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC++G ++ A  I+ +M S  I+P  +T+N LI+G GKV  +  A  +   M   G
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y R GQL +   +  +M+ K L PNV ++  ++NA CK  ++ +A 
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +   D++P   +YN +ID + + G+ D+A ++  +M+     P  VT+ +LI G 
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           C + ++ EA  + + +   G APD I+ N+LIS
Sbjct: 549 CKQSQISEAEELLDSLRNYGLAPDVISYNTLIS 581



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 207/399 (51%), Gaps = 2/399 (0%)

Query: 170 GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR-PGEVTMSTFM 228
           G H  V+  F+ + +    P++      V +C+ AG  D A G+L +    G    + F 
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN ++  L K     +AV +F E       P+  T+N +I G  + G+++  F  +  M 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P+++TYN L+SGLCR   +     +L E+  + +  PD  TY+ +  G+ + G  
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASR-KMVPDGFTYSILFDGHSRTGDS 309

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
                ++ E    G+K  A T ++L++G  K G +  AE + + +++ G L   V +++L
Sbjct: 310 QTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTL 369

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+GYC+ G L     +  +MK + + P+  T+  LIN L K  R+ +A   + +++ N +
Sbjct: 370 INGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGV 429

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    +N +ID + +AG +++  +I+++M+EK  KP+ V++  ++   C  G+++EA++
Sbjct: 430 NPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVA 489

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           I + M      P     N++I   ++ G  ++AF + ++
Sbjct: 490 ILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEK 528



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 194/418 (46%), Gaps = 7/418 (1%)

Query: 152 LNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           L H  K    TYN+++  LC  G       V D M S   +P+            R G  
Sbjct: 250 LRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDS 309

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
                L  +     V +  +  + LLN L K     +A  + +          T  +N L
Sbjct: 310 QTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTL 369

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  +IG+++ AF  F  M S    PD +TYN LI+GL +V  +   H+L+ E++ K+ 
Sbjct: 370 INGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME-KNG 428

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +P V T+ ++I  Y + G+++K   I ++M   G+KP+ V++  +++ F K G ++ A 
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M     LP    ++++ID Y   G  +Q   L ++MK   + P++ T+ +LI  L
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK++++++A   L  L+   L P    YN +I   C   N D A  +  EM +   KP  
Sbjct: 549 CKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSP 608

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN--EAFR 563
            T+ +L       GR+ E  +++ +ML     P     N ++    K G  +  EA R
Sbjct: 609 RTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALR 666



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 197/410 (48%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  +S   ++  M   G  PN       +S   RAG+      +L + 
Sbjct: 225 TYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEM 284

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++    F Y+ L +   +  ++   + +F+E  +   +   +T +IL+ GL + G++
Sbjct: 285 ASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKI 344

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E    + + G     V YNTLI+G C++ ++     + +++K +    PD +TY +
Sbjct: 345 SKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRL-IRPDHITYNA 403

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G  K+ ++ +A  +  EM   G+ PS  TFN LID +G+ G +     +   M   G
Sbjct: 404 LINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKG 463

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV++ S+++ +C+NG++ + + + D+M  K++ P    +  +I+A  +    + A 
Sbjct: 464 LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAF 523

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++K + + P    YN +I G CK   + EA  ++  +      PD +++  LI   
Sbjct: 524 MLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISAC 583

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +     A+ +  +M + G  P   T   L S L   G  +E   + Q+
Sbjct: 584 CYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQ 633



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 166/315 (52%), Gaps = 2/315 (0%)

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC-SPDIVTYNTLISGLCRVNEVARG 315
           ++PDT+T+N  +Q     G++ +A      MG  G  +P+  +YN +I+GL +       
Sbjct: 148 ARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDA 207

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            +L  E+  K+   P+ +TY ++I G+ K G ++    ++++M   G+KP+ +T+NVL+ 
Sbjct: 208 VKLFDEMPEKA-VVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLS 266

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  + G M     + + M S   +PD  T+S L DG+ R G     L L +E   K +  
Sbjct: 267 GLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKI 326

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
             YT +IL+N LCK+ +++ A   L+ L  + L+    +YN +I+G+C+ G+++ A  I 
Sbjct: 327 GAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIF 386

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M+ +  +PD +T+  LI G     R+ EA  +  +M + G  P   T N+LI    + 
Sbjct: 387 QQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRA 446

Query: 556 GMPNEAFRIMQRASE 570
           G   + F I+    E
Sbjct: 447 GQLEKCFIILSDMQE 461



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 162/354 (45%), Gaps = 36/354 (10%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  L  +   YN ++   C++G  +    +F  M+S                       
Sbjct: 355 VNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKS----------------------- 391

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
                     RP  +T     YN+L+N L K     EA  +  E  +    P   TFN L
Sbjct: 392 -------RLIRPDHIT-----YNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I    R G+++K F    DM   G  P++V+Y ++++  C+  ++     +L ++ F  +
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM-FIKD 498

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P    Y ++I  Y + G  D+A  +  +M S G+ PS VT+N+LI G  K   +  AE
Sbjct: 499 VLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAE 558

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + + ++G  PDV+++++LI   C     ++ L+L  EM    + P+  T+ +L ++L
Sbjct: 559 ELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSL 618

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
               R+++     +Q+   D+VP   +YN ++D + K G   +   +  EM +K
Sbjct: 619 GGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 199/373 (53%), Gaps = 3/373 (0%)

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           ++  K   A G+L+         + + +N LL  L +     +AV + +E  R    PD 
Sbjct: 118 VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDV 177

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +++N +I+G     E++KA E   +M   GCS  +VT+  LI   C+  ++      LKE
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE 237

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +KF      D+V YTS+I G+C  G++D+   +++E+   G  P A+T+N LI GF K+G
Sbjct: 238 MKFMG-LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + E M+  G  P+V T++ LIDG C  G+  + L+  + M  K+  PN  T+ 
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYN 356

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--E 499
           I+IN LCK+  + DA   ++ +K     P    YN ++ G C  G++DEA+ ++  M  +
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
                PD +++  LI G C + R+ +A+ I++ ++    A D +T N L++  LK G  N
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476

Query: 560 EAFRIMQRASEDQ 572
           +A  + ++ S+ +
Sbjct: 477 KAMELWKQISDSK 489



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 202/447 (45%), Gaps = 38/447 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+R  CE    +    + + M+  G   +       + +  +AGK D A G L + 
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +     +Y SL+         D    +F E       P   T+N LI+G  ++G++
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E F  M   G  P++ TY  LI GLC V +     + L  +  K E  P+ VTY  
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDE-EPNAVTYNI 357

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--S 395
           +I+  CK G +  A  I   M     +P  +T+N+L+ G    G++  A  +   ML  S
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-----KGKNLSPNVY------------ 438
               PDV+++++LI G C+  +L+Q L + D +      G  ++ N+             
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477

Query: 439 ------------------TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
                             T+T +I+  CK   LN A+  L +++ ++L P  F YN ++ 
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             CK G++D+A  +  EM+     PD V+F I+I G    G +  A S+   M R G +P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           D  T + LI+  LK G  +EA     +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDK 624



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 200/419 (47%), Gaps = 1/419 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           + L      Y  ++R  C+ G  D  + +FD +   G  P +      +    + G+   
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +        V  + + Y  L++ L       EA+           +P+  T+NI+I 
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIIN 360

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L + G V  A E    M      PD +TYN L+ GLC   ++    +LL  +   S ++
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420

Query: 330 -PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV++Y ++I G CK  ++ +A  IY+ +         VT N+L++   K G++  A  
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + +++     + +  T++++IDG+C+ G LN    L  +M+   L P+V+ +  L+++LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           KE  L+ A R  ++++ ++  P    +N +IDG  KAG++  A  ++  M      PD  
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T++ LI      G + EAIS F+KM+  G  PD    +S++   +  G  ++   ++++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 178/356 (50%), Gaps = 9/356 (2%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL----SRIGEVKKAF 281
            F  ++L+  LV+  N + A      ++R   + DT+   + + GL     ++ +   AF
Sbjct: 72  AFAGSNLMAKLVRSRNHELAF----SFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAF 127

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                M   G + ++  +N L+ GLCR  E  +   LL+E++ ++   PDV +Y +VI G
Sbjct: 128 GVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR-RNSLMPDVFSYNTVIRG 186

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +C+  +++KA  + NEM   G   S VT+ +LID F K G M  A    + M   G   D
Sbjct: 187 FCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD 246

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           +V ++SLI G+C  G+L++G  L DE+  +  SP   T+  LI   CK  +L +A    +
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +    + P  + Y  +IDG C  G   EA   +  M EK  +P+ VT+ I+I   C  G
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDG 366

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
            + +A+ I   M +    PD+IT N L+  L   G  +EA +++    +D +   P
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 195/421 (46%), Gaps = 11/421 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N++++ LC          +   MR +  +P+       +       + + A  L ++ +
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
               + S   +  L++A  K    DEA+   KE   +  + D   +  LI+G    GE+ 
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +    F ++   G SP  +TYNTLI G C++ ++    E+  E   +    P+V TYT +
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF-EFMIERGVRPNVYTYTGL 323

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G C +GK  +A    N M     +P+AVT+N++I+   K G +  A  + E M     
Sbjct: 324 IDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALCKENRLNDA 456
            PD +T++ L+ G C  G L++  KL   M        P+V ++  LI+ LCKENRL+ A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443

Query: 457 ----RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
                  +++L   D V    + N  +    KAG+V++A  +  ++ + +   +  T+T 
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTL----KAGDVNKAMELWKQISDSKIVRNSDTYTA 499

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +I G C  G +  A  +  KM      P     N L+S L K G  ++A+R+ +    D 
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559

Query: 573 N 573
           N
Sbjct: 560 N 560



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 177/394 (44%), Gaps = 39/394 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++R  C++G       +F++M   G  PN       +      GK   A   L+  
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLM 343

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   YN ++N L K     +AV + +   +  ++PD  T+NIL+ GL   G++
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 278 KKAFEFFYDM--GSFGCSPDIVTYNTLISGLCRVN------------------------- 310
            +A +  Y M   S    PD+++YN LI GLC+ N                         
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 311 ----------EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
                     +V +  EL K++   S+   +  TYT++I G+CK G ++ A G+  +M  
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQIS-DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             ++PS   +N L+    K G++  A  + E M      PDVV+F+ +IDG  + G +  
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              L   M    LSP+++T++ LIN   K   L++A  F  ++  +   P   + + V+ 
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDK-VTFTIL 513
                G  D+   +V ++ +K    DK +T T++
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 164/352 (46%), Gaps = 14/352 (3%)

Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL-- 214
           TYN+++  LC+ GL  D+V++V + M+     P++      +      G  D A  LL  
Sbjct: 354 TYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 215 ----SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
               S +   +V      YN+L++ L K+N   +A+ ++          D  T NIL+  
Sbjct: 413 MLKDSSYTDPDV----ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             + G+V KA E +  +       +  TY  +I G C+   +     LL +++  SE  P
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQP 527

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            V  Y  ++S  CK G +D+A  ++ EM      P  V+FN++IDG  K G++ SAE + 
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             M   G  PD+ T+S LI+ + + G L++ +   D+M      P+ +    ++     +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC-KAGNVDEANVIVAEMEEK 501
              +     +K+L   D+V    +   V+D  C  + N+D A  ++   ++K
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699


>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
 gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 233/471 (49%), Gaps = 32/471 (6%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           + +S    L+ ++ +  P  GL+F ++   N   +H  +++ L++  L   G   ++ V 
Sbjct: 64  QTISRTTVLQTLRLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFL---GRARNLNVA 119

Query: 179 FDYMRSDGHLPNS--PMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
            +++ S     N    + + + +S IR    AG    +  L    +   ++ S   +NSL
Sbjct: 120 RNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSL 179

Query: 233 LNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+ L+K+     A  +F E  R Y   PD++TFN LI G  +   V +AF  F DM  + 
Sbjct: 180 LSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYH 239

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLK-EVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           C+PD+VTYNT+I GLCR  +V   H +L   +K  ++  P+VV+YT+++ GYC   ++D+
Sbjct: 240 CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDE 299

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG-------YLPDVV 403
           A  ++++M S G+KP+AVT+N LI G  +     +  Y   + +  G       + PD  
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSE-----AHRYDEIKDILIGGNDAFTTFAPDAC 354

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           TF+ LI  +C  G L+  +K+  EM    L P+  ++++LI  LC  N  + A     +L
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414

Query: 464 KWNDLV-------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              +++       P    YNP+ +  C  G   +A  +  ++  KR   D  ++  LI G
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL-MKRGVQDPPSYKTLITG 473

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           HC +G+   A  +   MLR    PD  T   LI  LLK G    A   +QR
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR 524



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 166/337 (49%), Gaps = 23/337 (6%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN LI+     G  +++ + F  M   G SP ++T+N+L+S L +       H+L  E++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                +PD  T+ ++I+G+CK   +D+A  I+ +M      P  VT+N +IDG  + G +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260

Query: 384 VSAEYMRERML--SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
             A  +   ML  +    P+VV++++L+ GYC   ++++ + +  +M  + L PN  T+ 
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320

Query: 442 ILINALCKENRLNDARRFLKQLKWND----LVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            LI  L + +R ++ +  L  +  ND      P    +N +I   C AG++D A  +  E
Sbjct: 321 TLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML-------RIGCAPDDITVNSLIS 550
           M   +  PD  ++++LI   CM+     A ++FN++        +  C P     N +  
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438

Query: 551 CLLKGGMPNEA---FR-IMQRASEDQNLQLPSWKKAV 583
            L   G   +A   FR +M+R  +D     PS+K  +
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQDP----PSYKTLI 471



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 24/394 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
           +Y  ++R  C     D   +VF  M S G  PN+      +     A + D  K +L   
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGG 342

Query: 215 ----SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
               + F P   T     +N L+ A     + D A+ +F+E   +   PD+ ++++LI+ 
Sbjct: 343 NDAFTTFAPDACT-----FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 397

Query: 271 LSRIGEVKKAFEFFYDM-------GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           L    E  +A   F ++       G   C P    YN +   LC   +  +  ++ +++ 
Sbjct: 398 LCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +    P   +Y ++I+G+C+ GK   A  +   M      P   T+ +LIDG  K+G  
Sbjct: 458 KRGVQDPP--SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEA 515

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           + A    +RML   YLP   TF S++    +    N+   L   M  K +  N+   T +
Sbjct: 516 LLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQV 575

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           +  L    +   A   ++ L  N  + K      ++   C+   + +A+ +V    EK  
Sbjct: 576 VRLLFSSAQKEKAFLIVRLLYDNGYLVK---MEELLGYLCENRKLLDAHTLVLFCLEKSQ 632

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
             D  T   +I G C   R  EA S++N+++ +G
Sbjct: 633 MVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/329 (21%), Positives = 132/329 (40%), Gaps = 41/329 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++++ C+ G  D+   VF  M +    P+S      + +     + D A+ L ++ 
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414

Query: 218 RPGEVTMS-------TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
              EV +           YN +   L       +A  +F++  +   Q D  ++  LI G
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITG 473

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             R G+ K A+E    M      PD+ TY  LI GL ++ E    H+ L+ +  +S + P
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM-LRSSYLP 532

Query: 331 DVVTYTSVIS----------GYCKLGKM---------DKATGIYNEMNSCGIKPSAVTFN 371
              T+ SV++           +C +  M         D +T +   + S   K  A    
Sbjct: 533 VATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIV 592

Query: 372 VLIDGFGKVGNM-------------VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
            L+   G +  M             + A  +    L    + D+ T +++I+G C++ + 
Sbjct: 593 RLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRH 652

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINAL 447
           ++   L +E+        +    +L NAL
Sbjct: 653 SEAFSLYNELVELGNHQQLSCHVVLRNAL 681



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 52/247 (21%), Positives = 95/247 (38%), Gaps = 20/247 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           +Y  ++   C  G       +   M     +P+    E  +   ++ G+   A   L + 
Sbjct: 466 SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEA----VYMFKEYFRLYSQPDTWTFNILIQGLS 272
            R   + ++T  ++S+L  L K+  A+E+      M ++  R      T    +L     
Sbjct: 526 LRSSYLPVAT-TFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSS-- 582

Query: 273 RIGEVKKAF---EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + +KAF      YD G       +V    L+  LC   ++   H L+     KS+  
Sbjct: 583 --AQKEKAFLIVRLLYDNGY------LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMV 634

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            D+ T  +VI G CK  +  +A  +YNE+   G         VL +     G     +++
Sbjct: 635 -DIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFV 693

Query: 390 RERMLSF 396
            +RM + 
Sbjct: 694 SKRMATL 700


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 198/410 (48%), Gaps = 1/410 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + LS   S  TYN ++ +L E G     + +   M ++G +P        +   ++  + 
Sbjct: 300 MRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQA 359

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +AA+   ++ R   +      YNSLLN   K  N  EA+++  +  R    P   T+N L
Sbjct: 360 EAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTL 419

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  R+G++ +A     +M   GC PD+ TY  L++G  +V  +A   E   E+  K  
Sbjct: 420 IDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKG- 478

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD   Y + I     L     A  +   M   GI P  VT+NV+IDG  K GN+  A+
Sbjct: 479 LQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 538

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            ++ +M+S G  PD +T++ LI  +C  G L +  KL + M    L P+V T+TIL++  
Sbjct: 539 RLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTC 598

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+   L  A  + +++    + P    YN +I   C  G    A     EM E+   P+K
Sbjct: 599 CRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNK 658

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
            T+T+LI G+C +G   +AI ++ +M + G  PD  T N+L     +G M
Sbjct: 659 YTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDEGHM 708



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 201/418 (48%), Gaps = 4/418 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG--HLPNSPMIEFFVSSCIRAG 205
           + L +  +  TYN ++ S  + G  D   ++   M + G     N       +S   R G
Sbjct: 229 LQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREG 288

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             + A  L+   R  +   S+F YN L+ AL+++    +A  +  E       P   T+N
Sbjct: 289 HLENAVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYN 347

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            +I GL +  + + A   F +M + G  PD++TYN+L++  C+   +     LL +++ +
Sbjct: 348 AIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLR-R 406

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +  +P V+TY ++I GYC+LG + +A  +  EM   G  P   T+ +L++G  KV N+  
Sbjct: 407 AGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAM 466

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A    + MLS G  PD   +++ I             +L + M  K + P+  T+ ++I+
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIID 526

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK   L DA+R   ++  + L P    Y  +I   C+ G + EA  ++  M     +P
Sbjct: 527 GLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQP 586

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             VT+TIL+   C +G +  A   F KML +G  P++IT N LI  L   G    AFR
Sbjct: 587 SVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFR 644



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 215/434 (49%), Gaps = 6/434 (1%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPN 190
           R D   + LK +E      SLN    T+N+V+  L   G L ++V++V D MR      +
Sbjct: 252 RKDEASMLLKEMETQGGGFSLNDV--TFNVVISFLAREGHLENAVKLV-DSMRLSKK-AS 307

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           S      +++ +  G    A+ L  +     +  +   YN++++ L+K   A+ A   F 
Sbjct: 308 SFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFA 367

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E   +   PD  T+N L+    + G +K+A     D+   G +P ++TYNTLI G CR+ 
Sbjct: 368 EMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 427

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           ++A    L +E+  +  F PDV TYT +++G  K+  +  A   ++EM S G++P    +
Sbjct: 428 DLAEARRLKEEMVEQGCF-PDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N  I     + +   A  +RE M+  G  PD VT++ +IDG C+ G L    +L  +M  
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVS 546

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
             L P+  T+T LI+A C+   L +AR+ L  +  + L P    Y  ++   C+ GN+  
Sbjct: 547 DGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYS 606

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A     +M +   +P+++T+ +LI   CM GR   A   F++ML  G AP+  T   LI 
Sbjct: 607 AYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLID 666

Query: 551 CLLKGGMPNEAFRI 564
              + G   +A R+
Sbjct: 667 GNCREGNWADAIRL 680



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 178/371 (47%), Gaps = 6/371 (1%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL---YSQPD 260
           A + D  + +  +     V  +   YN+LL++ +K+   DEA  + KE       +S  D
Sbjct: 215 AARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLND 274

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             TFN++I  L+R G ++ A +    M          TYN LI+ L     V +   L  
Sbjct: 275 V-TFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQM 332

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E++ +    P VVTY ++I G  K  + + A   + EM + G+ P  +T+N L++ + K 
Sbjct: 333 EMENEG-IMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKA 391

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           GN+  A ++   +   G  P V+T+++LIDGYCR G L +  +L +EM  +   P+V T+
Sbjct: 392 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTY 451

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           TIL+N   K   L  AR F  ++    L P  F YN  I       +   A  +   M  
Sbjct: 452 TILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMML 511

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K   PD VT+ ++I G C  G + +A  +  KM+  G  PD IT   LI    + G+  E
Sbjct: 512 KGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLRE 571

Query: 561 AFRIMQRASED 571
           A +++     D
Sbjct: 572 ARKLLNGMVSD 582



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 158/344 (45%), Gaps = 4/344 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L  L      D+   ++ E  +L  +P   T+N L+    + G   +A     +M +
Sbjct: 206 NRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMET 265

Query: 290 FGC--SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            G   S + VT+N +IS L R   +    +L+  ++   + S    TY  +I+   + G 
Sbjct: 266 QGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASS--FTYNPLITALLERGF 323

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           + KA  +  EM + GI P+ VT+N +I G  K     +A+     M + G LPDV+T++S
Sbjct: 324 VRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNS 383

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L++ YC+ G L + L L  +++   L+P V T+  LI+  C+   L +ARR  +++    
Sbjct: 384 LLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQG 443

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    Y  +++G  K  N+  A     EM  K  +PD   +   I           A 
Sbjct: 444 CFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAF 503

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +   M+  G  PD +T N +I  L K G   +A R+  +   D
Sbjct: 504 QLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSD 547



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 149/319 (46%), Gaps = 6/319 (1%)

Query: 253 FRLYS----QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           FRL +     PD    N +++ L            + +M      P IVTYNTL+    +
Sbjct: 190 FRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLK 249

Query: 309 VNEVARGHELLKEVKFK-SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
                    LLKE++ +   FS + VT+  VIS   + G ++ A  + + M     K S+
Sbjct: 250 EGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKASS 308

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T+N LI    + G +  AE ++  M + G +P VVT++++I G  +  Q         E
Sbjct: 309 FTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAE 368

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+   L P+V T+  L+N  CK   L +A   L  L+   L P    YN +IDG+C+ G+
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           + EA  +  EM E+ C PD  T+TIL+ G      +  A   F++ML  G  PD    N+
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488

Query: 548 LISCLLKGGMPNEAFRIMQ 566
            I   L       AF++ +
Sbjct: 489 RICAELTLSSTPMAFQLRE 507



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 3/245 (1%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +PDV     V+       + D    +Y EM    ++P+ VT+N L+D F K G    A  
Sbjct: 199 APDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASM 258

Query: 389 MRERMLS--FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + + M +   G+  + VTF+ +I    R G L   +KL D M+    + + +T+  LI A
Sbjct: 259 LLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASS-FTYNPLITA 317

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           L +   +  A     +++   ++P    YN +I G  K    + A V  AEM      PD
Sbjct: 318 LLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPD 377

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +T+  L+  +C  G + EA+ +   + R G AP  +T N+LI    + G   EA R+ +
Sbjct: 378 VITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKE 437

Query: 567 RASED 571
              E 
Sbjct: 438 EMVEQ 442



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 99/238 (41%), Gaps = 38/238 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G     + +   M SDG  P+         +C+    C+  +GLL + 
Sbjct: 520 TYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDC-----ITYTCLIHAHCE--RGLLREA 572

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R             LLN +V                    QP   T+ IL+    R G +
Sbjct: 573 R------------KLLNGMVSDG----------------LQPSVVTYTILVHTCCRRGNL 604

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+ +F  M   G  P+ +TYN LI  LC             E+  +   +P+  TYT 
Sbjct: 605 YSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEM-LERGLAPNKYTYTL 663

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERML 394
           +I G C+ G    A  +Y EM+  GI P   T N L  GF + G+M  A EYM   +L
Sbjct: 664 LIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDE-GHMYHAIEYMENIVL 720



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 69/165 (41%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K L+   V+  L     TY  ++ + CE GL    + + + M SDG  P+       V +
Sbjct: 538 KRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHT 597

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           C R G   +A G   +     +  +   YN L++AL        A   F E       P+
Sbjct: 598 CCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPN 657

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
            +T+ +LI G  R G    A   +++M   G  PD  T+N L  G
Sbjct: 658 KYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 702



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 4/144 (2%)

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           ++P+V     ++  L    R +D R    ++    + P    YN ++D F K G  DEA+
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 493 VIVAEMEEKRC--KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           +++ EME +      + VTF ++I     +G +  A+ + + M R+       T N LI+
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLIT 316

Query: 551 CLLKGGMPNEAFRIMQRASEDQNL 574
            LL+ G   +A   +Q   E++ +
Sbjct: 317 ALLERGFVRKA-EALQMEMENEGI 339


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+S     SLLN         EAV +  + F +  QP+T TFN LI GL    +
Sbjct: 130 YEPDIVTLS-----SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 184

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M + GC PD+ TY T+++GLC+  ++     LLK+++ K +   DVV YT
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYT 243

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I   C    ++ A  ++ EM++ GI+P+ VT+N LI      G    A  +   M+  
Sbjct: 244 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 303

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+VVTFS+LID + + G+L +  KL DEM  +++ P+++T++ LIN  C  +RL++A
Sbjct: 304 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 363

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +   + +   D  P    YN +I GFCKA  V+E   +  EM ++    + VT+  LI G
Sbjct: 364 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 423

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               G    A  IF KM+  G  PD IT + L+  L K G   +A  + +
Sbjct: 424 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 473



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 1/408 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL +++   +YN+++   C          V   M   G+ P+   +   ++      +  
Sbjct: 92  NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 151

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q    E   +T  +N+L++ L   N A EAV +         QPD +T+  ++
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 211

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G++  A      M       D+V Y T+I  LC    V     L  E+  K   
Sbjct: 212 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG-I 270

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+VVTY S+I   C  G+   A+ + ++M    I P+ VTF+ LID F K G +V AE 
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M+     PD+ T+SSLI+G+C + +L++   + + M  K+  PNV T+  LI   C
Sbjct: 331 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 390

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+ +     +++    LV     YN +I G  +AG+ D A  I  +M      PD +
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 450

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           T++IL+ G C  G++ +A+ +F  + +    PD  T N +I  + K G
Sbjct: 451 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 208/446 (46%), Gaps = 42/446 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  L           + D M + G  P+       V+   + G  D A  LL + 
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY------------------------- 252
             G++     +Y ++++AL    N ++A+ +F E                          
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 253 ---FRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
               RL S        P+  TF+ LI    + G++ +A + + +M      PDI TY++L
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 303 ISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           I+G C   R++E     EL+       +  P+VVTY ++I G+CK  ++++   ++ EM+
Sbjct: 351 INGFCMHDRLDEAKHMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 406

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G+  + VT+N LI G  + G+   A+ + ++M+S G  PD++T+S L+DG C+ G+L 
Sbjct: 407 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 466

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L + + ++   + P++YT+ I+I  +CK  ++ D       L    + P   +Y  +I
Sbjct: 467 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
            GFC+ G  +EA+ +  EM+E    P+  T+  LI      G    +  +  +M   G  
Sbjct: 527 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 586

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIM 565
            D  T++ +I+ L  G +      ++
Sbjct: 587 GDASTISMVINMLHDGRLEKSYLEML 612



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 174/365 (47%), Gaps = 1/365 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L  +        S   +N LL+A+ K N  D  + + +    L    D +++N
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ILI    R  ++  A      M   G  PDIVT ++L++G C    ++    L+ ++ F 
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM-FV 162

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
            E+ P+ VT+ ++I G     K  +A  + + M + G +P   T+  +++G  K G++  
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + ++M       DVV ++++ID  C    +N  L L  EM  K + PNV T+  LI 
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC   R +DA R L  +    + P    ++ +ID F K G + EA  +  EM ++   P
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  T++ LI G CM  R+ EA  +F  M+   C P+ +T N+LI    K     E   + 
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402

Query: 566 QRASE 570
           +  S+
Sbjct: 403 REMSQ 407



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 134/270 (49%), Gaps = 2/270 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S++    TY+ ++   C     D  + +F+ M S    PN       +    +A + +  
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +     +  +T  YN+L+  L +  + D A  +FK+       PD  T++IL+ G
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G+++KA   F  +      PDI TYN +I G+C+  +V  G +L   +  K    P
Sbjct: 459 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKP 517

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +V+ YT++ISG+C+ G  ++A  ++ EM   G  P++ T+N LI    + G+  ++  + 
Sbjct: 518 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 577

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           + M S G++ D  T S +I+    +G+L +
Sbjct: 578 KEMRSCGFVGDASTISMVIN-MLHDGRLEK 606


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 207/416 (49%)

Query: 149  NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
            N  L  + +  N ++    EM L +    VFD M + G  P+S   ++ +    R G   
Sbjct: 789  NQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVL 848

Query: 209  AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
             A   + +       +       ++ A  +++  + AV+ F +  ++   P+   ++ +I
Sbjct: 849  EADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMI 908

Query: 269  QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             GL + G VK+AFE   +M   G  P++ T+ +LI GLC+     R   L  ++     +
Sbjct: 909  SGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY 968

Query: 329  SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             P+V TYT++ISGYCK  K+ +A  ++  M   G+ P+  T+  LIDG  K GN   A  
Sbjct: 969  KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 1028

Query: 389  MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
            + E M + G+ P+  T++S++DG C+ G+  +  KL +      +  +  T+TILI+  C
Sbjct: 1029 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 1088

Query: 449  KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
            K   +N A  FL ++      P   +Y  +I  FC+   + ++  +  E+ +    P K 
Sbjct: 1089 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKE 1148

Query: 509  TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            T+T +I G+C + ++  A+  F KM   GCAPD I+  +LIS L K    +EA ++
Sbjct: 1149 TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQL 1204



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 172/377 (45%), Gaps = 2/377 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            T  L++ + CE  L +     F  +   G  PN       +S   + G    A  LL + 
Sbjct: 868  TLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 927

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
                   + + + SL++ L K+   + A  +F +  R  + +P+  T+  +I G  +  +
Sbjct: 928  VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 987

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + +A   F  M   G  P+  TY TLI G C+    ++ +EL+ E+     F P+  TY 
Sbjct: 988  LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM-ELMSNEGFFPNTCTYN 1046

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            S++ G CK G+ ++A  + N      I+   VT+ +LI    K  +M  A     +M   
Sbjct: 1047 SIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKV 1106

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            G+ PD+  +++LI  +CR   +    KL DE+    L+P   T+T +I   C+E +++ A
Sbjct: 1107 GFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLA 1166

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             +F +++  +   P    Y  +I G CK   +DEA  +   M +K   P +VT   L   
Sbjct: 1167 VKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYE 1226

Query: 517  HCMKGRMVEAISIFNKM 533
            +C       A+ I  ++
Sbjct: 1227 YCKTEDFASAMVILERL 1243



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 2/307 (0%)

Query: 267  LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
            ++   + IG++K+A +   DM + G        N +I     +  V     +  E+  + 
Sbjct: 767  MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 327  EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             + PD  TY  +I GYC+ G + +A     EM   G      T  ++I  F +   +  A
Sbjct: 827  VY-PDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRA 885

Query: 387  EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   ++   G  P+++ +SS+I G C+ G + Q  +L +EM      PNVYT T LI+ 
Sbjct: 886  VWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHG 945

Query: 447  LCKENRLNDA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK+     A R FLK ++ ++  P    Y  +I G+CK   +  A ++   M+E+   P
Sbjct: 946  LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 1005

Query: 506  DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +  T+T LI GHC  G   +A  +   M   G  P+  T NS++  L K G   EAF+++
Sbjct: 1006 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 1065

Query: 566  QRASEDQ 572
                ++Q
Sbjct: 1066 NTGFQNQ 1072



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 4/306 (1%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY  ++   C+       +++F+ M+  G +PN+      +    +AG    A  L+   
Sbjct: 974  TYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELM 1033

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   +T  YNS+++ L K+  A+EA  +    F+   + D  T+ ILI    +  ++
Sbjct: 1034 SNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADM 1093

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             +A  F   M   G  PDI  Y TLI+  CR N +    +L  EV  K   +P   TYTS
Sbjct: 1094 NQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV-IKLGLAPTKETYTS 1152

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I GYC+  K+  A   + +M+  G  P ++++  LI G  K   +  A  + + M+  G
Sbjct: 1153 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 1212

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              P  VT  +L   YC+       + + + +  K     V+T   LI  LC E ++  A 
Sbjct: 1213 LSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAA 1269

Query: 458  RFLKQL 463
             F  +L
Sbjct: 1270 LFFHKL 1275



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 88/204 (43%)

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           C ++ +      ++  F ++G +  A  M   M + G +      + +I        +  
Sbjct: 755 CNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEY 814

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              + DEM  + + P+  T+  +I   C+   + +A R++ ++     V        +I 
Sbjct: 815 AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 874

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            FC+   V+ A     ++ +    P+ + ++ +I G C +G + +A  +  +M++ G  P
Sbjct: 875 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 934

Query: 541 DDITVNSLISCLLKGGMPNEAFRI 564
           +  T  SLI  L K G    AFR+
Sbjct: 935 NVYTHTSLIHGLCKKGWTERAFRL 958


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 211/438 (48%), Gaps = 46/438 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T++ ++   C  G       + D M      P+   +   ++     G+   A  L+ + 
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P EVT     Y  +LN L K  N+  A+ +F++      +     ++I+I  L 
Sbjct: 231 VEYGFQPDEVT-----YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 285

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G    A   F +M   G   D+VTY++LI GLC   +   G ++L+E+       PDV
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPDV 344

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VT++++I  + K GK+ +A  +YNEM + GI P  +T+N LIDGF K   +  A  M + 
Sbjct: 345 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 404

Query: 393 MLSFGYLPDVVTFSSLID-----------------------------------GYCRNGQ 417
           M+S G  PD+VT+S LI+                                   G+C++G+
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           LN   +L  EM  + + P+V T+ IL++ LC    LN A    ++++ + +     +YN 
Sbjct: 465 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I G C A  VD+A  +   + +K  KPD VT+ ++I G C KG + EA  +F KM   G
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584

Query: 538 CAPDDITVNSLISCLLKG 555
           C PDD T N LI   L G
Sbjct: 585 CTPDDFTYNILIRAHLGG 602



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 203/395 (51%), Gaps = 1/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+ G       +F  M       +       + S  + G  D A  L ++ 
Sbjct: 241 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 300

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+SL+  L      D+   M +E       PD  TF+ LI    + G++
Sbjct: 301 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 360

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E + +M + G +PD +TYN+LI G C+ N +   +++  ++       PD+VTY+ 
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSI 419

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+ YCK  ++D    ++ E++S G+ P+ +T+N L+ GF + G + +A+ + + M+S G
Sbjct: 420 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 479

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT+  L+DG C NG+LN+ L++ ++M+   ++  +  + I+I+ +C  ++++DA 
Sbjct: 480 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 539

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I G CK G++ EA+++  +M+E  C PD  T+ ILI  H
Sbjct: 540 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 599

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                ++ ++ +  +M   G + D  T+  +I  L
Sbjct: 600 LGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 208/430 (48%), Gaps = 7/430 (1%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRS-LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           G   L +S    S+  +  +Y   +R+ + ++ ++D++ + F+ M     LP        
Sbjct: 51  GTSLLHYS----SITEAKLSYKERLRNGIVDIKVNDAIDL-FESMIQSRPLPTPIDFNRL 105

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
            S+  R  + D   G         +    +    ++N   ++     A  +    ++L  
Sbjct: 106 CSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY 165

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PDT TF+ L+ G    G V +A      M      PD+VT +TLI+GLC    V+    
Sbjct: 166 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 225

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L+  +  +  F PD VTY  V++  CK G    A  ++ +M    IK S V ++++ID  
Sbjct: 226 LIDRM-VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 284

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G+   A  +   M   G   DVVT+SSLI G C +G+ + G K+  EM G+N+ P+V
Sbjct: 285 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 344

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            TF+ LI+   KE +L +A+    ++    + P    YN +IDGFCK   + EAN +   
Sbjct: 345 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 404

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K C+PD VT++ILI  +C   R+ + + +F ++   G  P+ IT N+L+    + G 
Sbjct: 405 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 464

Query: 558 PNEAFRIMQR 567
            N A  + Q 
Sbjct: 465 LNAAKELFQE 474



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 1/347 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           T  +++L+N    +    EAV +      +  +PD  T + LI GL   G V +A     
Sbjct: 169 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 228

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M  +G  PD VTY  +++ LC+    A   +L ++++ ++     VV Y+ VI   CK 
Sbjct: 229 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN-IKASVVQYSIVIDSLCKD 287

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G  D A  ++NEM   GIK   VT++ LI G    G       M   M+    +PDVVTF
Sbjct: 288 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 347

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S+LID + + G+L +  +L +EM  + ++P+  T+  LI+  CKEN L++A +    +  
Sbjct: 348 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 407

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    Y+ +I+ +CKA  VD+   +  E+  K   P+ +T+  L++G C  G++  
Sbjct: 408 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 467

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           A  +F +M+  G  P  +T   L+  L   G  N+A  I ++  + +
Sbjct: 468 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 1/185 (0%)

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E M+    LP  + F+ L     R  Q +  L  C  M+   +  ++YT TI+IN  C++
Sbjct: 88  ESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK 147

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            +L  A   L +       P    ++ +++GFC  G V EA  +V  M E + +PD VT 
Sbjct: 148 KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV 207

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + LI G C+KGR+ EA+ + ++M+  G  PD++T   +++ L K G    A  +  R  E
Sbjct: 208 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF-RKME 266

Query: 571 DQNLQ 575
           ++N++
Sbjct: 267 ERNIK 271



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 60/152 (39%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++  LC+ G  +    +F+ M+         +    +     A K D A  L 
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 542

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  V      YN ++  L K+ +  EA  +F++       PD +T+NILI+     
Sbjct: 543 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 602

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
             +  + E   +M   G S D  T   +I  L
Sbjct: 603 SGLISSVELIEEMKVCGFSADSSTIKMVIDML 634


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 205/413 (49%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L  + +  N ++    EM L +    VFD M + G  P+S   ++ +    R G   
Sbjct: 202 NQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVL 261

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A   + +       +       ++ A  +++  + AV+ F +  ++   P+   ++ +I
Sbjct: 262 EADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMI 321

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G VK+AFE   +M   G  P++ T+ +LI GLC+     R   L  ++     +
Sbjct: 322 SGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY 381

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+V TYT++ISGYCK  K+ +A  ++  M   G+ P+  T+  LIDG  K GN   A  
Sbjct: 382 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 441

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E M + G+ P+  T++S++DG C+ G+  +  KL +      +  +  T+TILI+  C
Sbjct: 442 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 501

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K   +N A  FL ++      P   +Y  +I  FC+   + ++  +  E+ +    P K 
Sbjct: 502 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKE 561

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           T+T +I G+C + ++  A+  F KM   GCAPD I+  +LIS L K    +EA
Sbjct: 562 TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEA 614



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 172/377 (45%), Gaps = 2/377 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T  L++ + CE  L +     F  +   G  PN       +S   + G    A  LL + 
Sbjct: 281 TLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 340

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
                  + + + SL++ L K+   + A  +F +  R  + +P+  T+  +I G  +  +
Sbjct: 341 VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 400

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A   F  M   G  P+  TY TLI G C+    ++ +EL+ E+     F P+  TY 
Sbjct: 401 LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM-ELMSNEGFFPNTCTYN 459

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++ G CK G+ ++A  + N      I+   VT+ +LI    K  +M  A     +M   
Sbjct: 460 SIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKV 519

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+ PD+  +++LI  +CR   +    KL DE+    L+P   T+T +I   C+E +++ A
Sbjct: 520 GFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLA 579

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +F +++  +   P    Y  +I G CK   +DEA  +   M +K   P +VT   L   
Sbjct: 580 VKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYE 639

Query: 517 HCMKGRMVEAISIFNKM 533
           +C       A+ I  ++
Sbjct: 640 YCKTEDFASAMVILERL 656



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 2/307 (0%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           ++   + IG++K+A +   DM + G        N +I     +  V     +  E+  + 
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            + PD  TY  +I GYC+ G + +A     EM   G      T  ++I  F +   +  A
Sbjct: 240 VY-PDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRA 298

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
            +   ++   G  P+++ +SS+I G C+ G + Q  +L +EM      PNVYT T LI+ 
Sbjct: 299 VWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHG 358

Query: 447 LCKENRLNDA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           LCK+     A R FLK ++ ++  P    Y  +I G+CK   +  A ++   M+E+   P
Sbjct: 359 LCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 418

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +  T+T LI GHC  G   +A  +   M   G  P+  T NS++  L K G   EAF+++
Sbjct: 419 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLL 478

Query: 566 QRASEDQ 572
               ++Q
Sbjct: 479 NTGFQNQ 485



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 4/306 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+       +++F+ M+  G +PN+      +    +AG    A  L+   
Sbjct: 387 TYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELM 446

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T  YNS+++ L K+  A+EA  +    F+   + D  T+ ILI    +  ++
Sbjct: 447 SNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADM 506

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A  F   M   G  PDI  Y TLI+  CR N +    +L  EV  K   +P   TYTS
Sbjct: 507 NQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV-IKLGLAPTKETYTS 565

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+  K+  A   + +M+  G  P ++++  LI G  K   +  A  + + M+  G
Sbjct: 566 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 625

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT  +L   YC+       + + + +  K     V+T   LI  LC E ++  A 
Sbjct: 626 LSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAA 682

Query: 458 RFLKQL 463
            F  +L
Sbjct: 683 LFFHKL 688



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/215 (20%), Positives = 91/215 (42%)

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           C ++ +      ++  F ++G +  A  M   M + G +      + +I        +  
Sbjct: 168 CNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEY 227

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              + DEM  + + P+  T+  +I   C+   + +A R++ ++     V        +I 
Sbjct: 228 AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 287

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            FC+   V+ A     ++ +    P+ + ++ +I G C +G + +A  +  +M++ G  P
Sbjct: 288 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 347

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           +  T  SLI  L K G    AFR+  +     N +
Sbjct: 348 NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYK 382


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 202/410 (49%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  +   G       VFD M     LPN       +   I+ G  +A   L  Q 
Sbjct: 202 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 261

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN LL+ L +     E   +  E       PD +T++IL  GLSR G+ 
Sbjct: 262 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K     F      G +    T + L++GLC+  +V+   E+L+ +   +   P  V Y +
Sbjct: 322 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL-VNAGLVPTRVIYNT 380

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC+ G+++ A   + +M S  IKP  +T+N LI+G  K   + +A+ +   M   G
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 440

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y R GQL +   +  EM+   L PNV ++  ++NA CK  ++ +A 
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +   D++P   +YN +ID + + G  D+A ++V +M+     P  VT+ +LI G 
Sbjct: 501 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C + ++ EA  I N +      PD ++ N+LIS     G  ++A  + QR
Sbjct: 561 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 610



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 213/414 (51%), Gaps = 2/414 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  + NL++ +L  +G H  V+  F  + S G  P++      V +C+ AG    A G+L
Sbjct: 128 SLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGML 187

Query: 215 SQF-RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
            +  R G    + F YN ++  + +     +AV +F E       P+  T+N +I G  +
Sbjct: 188 RRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIK 247

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G+++  F     M   G  P+ +TYN L+SGLCR   +     LL E+    +  PD  
Sbjct: 248 GGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA-SQKMVPDGF 306

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+ +  G  + G       ++ +    G+     T ++L++G  K G +  AE + + +
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 366

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           ++ G +P  V +++LI+GYC+ G+L        +MK +++ P+  T+  LIN LCK  R+
Sbjct: 367 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 426

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A+  L +++ N + P    +N +ID + + G +++  ++++EM+E   KP+ V++  +
Sbjct: 427 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 486

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   C  G++ EA++I + M      P+    N++I   ++ G  ++AF ++++
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 540



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 205/421 (48%), Gaps = 3/421 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  ++   + D M   G  PN+      +S   RAG+      LL + 
Sbjct: 237 TYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM 296

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++    F Y+ L + L +  ++   + +F +Y +       +T +IL+ GL + G+V
Sbjct: 297 ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKV 356

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    + + G  P  V YNTLI+G C+  E+        ++K +    PD +TY +
Sbjct: 357 SIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR-HIKPDHITYNA 415

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK  ++  A  +  EM   G+ P+  TFN LID +G+ G +     +   M   G
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 475

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV++ S+++ +C+NG++ + + + D+M  K++ PN   +  +I+A  +    + A 
Sbjct: 476 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 535

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++++K N + P    YN +I G C    + EA  I+  +   R  PD V++  LI   
Sbjct: 536 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 595

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           C +G + +A+ +  +M + G      T + LIS L   G  NE   + Q+    QN  +P
Sbjct: 596 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM--QNNVVP 653

Query: 578 S 578
           S
Sbjct: 654 S 654



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 191/399 (47%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G       + D M S   +P+            R G   A   L  ++
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT+  +  + LLN L K      A  + +        P    +N LI G  + GE+
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M S    PD +TYN LI+GLC+   +    +LL E++  +  +P V T+ +
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ-DNGVNPTVETFNT 450

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G+++K   + +EM   G+KP+ V++  +++ F K G +  A  + + M    
Sbjct: 451 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 510

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+   ++++ID Y  +G  +Q   L ++MK   +SP++ T+ +LI  LC ++++++A 
Sbjct: 511 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 570

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  L  + L+P    YN +I   C  GN+D+A  +   M +   K    T+  LI G 
Sbjct: 571 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 630

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
              GR+ E   ++ KM++    P +   N ++    K G
Sbjct: 631 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 669



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 161/316 (50%), Gaps = 2/316 (0%)

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP-DIVTYNTLISGLCRVNEVARG 315
           ++PDT+ +N  +Q     G++ +A      MG  G  P +  +YN +I+G+ R       
Sbjct: 160 ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 219

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            E+  E+  ++   P+ +TY ++I G+ K G ++    + ++M   G+KP+A+T+NVL+ 
Sbjct: 220 VEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 278

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  + G M     + + M S   +PD  T+S L DG  RNG     L L  +     ++ 
Sbjct: 279 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 338

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
             YT +IL+N LCK+ +++ A   L+ L    LVP   +YN +I+G+C+ G ++ A    
Sbjct: 339 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 398

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M+ +  KPD +T+  LI G C   R+  A  +  +M   G  P   T N+LI    + 
Sbjct: 399 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 458

Query: 556 GMPNEAFRIMQRASED 571
           G   + F ++    E+
Sbjct: 459 GQLEKCFIVLSEMQEN 474



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 165/349 (47%), Gaps = 1/349 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++  LC+ G     + V   + + G +P   +    ++   + G+ + A     Q 
Sbjct: 342 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 401

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +      YN+L+N L K      A  +  E       P   TFN LI    R G++
Sbjct: 402 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 461

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K F    +M   G  P++V+Y ++++  C+  ++     +L ++ F  +  P+   Y +
Sbjct: 462 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-FHKDVLPNAQVYNA 520

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G  D+A  +  +M S GI PS VT+N+LI G      +  AE +   + +  
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD V++++LI   C  G +++ L L   M    +   V T+  LI+ L    RLN+  
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 640

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
              +++  N++VP   ++N +++ + K GN  +A  +  EM +KR   D
Sbjct: 641 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 689



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 119/243 (48%), Gaps = 1/243 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N + +T+N ++ +    G  +   +V   M+ +G  PN       V++  + GK   A 
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +L      +V  +  +YN++++A V+    D+A  + ++       P   T+N+LI+GL
Sbjct: 501 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
               ++ +A E    + +    PD V+YNTLIS  C    + +  +L + +  K      
Sbjct: 561 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM-HKYGIKST 619

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TY  +ISG    G++++   +Y +M    + PS    N++++ + K GN + AE +R+
Sbjct: 620 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 679

Query: 392 RML 394
            ML
Sbjct: 680 EML 682



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP--FMYNPVIDGFCKAGNVDEAN 492
           P+ + +   + A      L +A   L+++   D  P P  F YN VI G  +AG   +A 
Sbjct: 162 PDTFAWNKAVQACVAAGDLGEAVGMLRRM-GRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 220

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  EM E+   P+ +T+  +I GH   G +     + ++M+  G  P+ IT N L+S L
Sbjct: 221 EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGL 280

Query: 553 LKGGMPNEAFRIMQRASEDQ 572
            + G   E   ++   +  +
Sbjct: 281 CRAGRMGETSALLDEMASQK 300


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 208/396 (52%), Gaps = 13/396 (3%)

Query: 182 MRSDGHLP----NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +RSD  +P    ++ +  + +S     G     K    +FRP  +T      N+LLNALV
Sbjct: 130 LRSDHTIPKPLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTC-----NTLLNALV 184

Query: 238 KQNNADEAVY---MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           + N++   V+   +F++  +L  QP+  TFNILI G       ++A      MG +GC P
Sbjct: 185 RSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCP 244

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D VTYNT+++ LC+ +++ +  +LL ++K    F P+  TY  ++ GYCKL  + +A  +
Sbjct: 245 DNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF-PNRNTYNILVHGYCKLKWLKEAAEV 303

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
              M   G+ P   T+N ++ G    G +  A  +R++M SF  +PDVVT+++LIDG   
Sbjct: 304 IELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFE 363

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           +   +   KL +EMK + +  N  T  I+I   C E ++++A   + ++  +   P  F 
Sbjct: 364 HRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFT 423

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +I+G+CKAG + EA  ++ EM  K  K D  T   L+   C++ ++ +A ++  K  
Sbjct: 424 YNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKAR 483

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + G   D++T  +LI    K    + A ++ +   E
Sbjct: 484 KRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 199/420 (47%), Gaps = 6/420 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+ +LC+      V+ +   M++ G  PN       V    +      A  ++   
Sbjct: 248 TYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELM 307

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK--EYFRLYSQPDTWTFNILIQGLSRIG 275
               +    + YN+++  L  +   DEAV +    E F+L   PD  T+N LI G     
Sbjct: 308 TGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLV--PDVVTYNTLIDGCFEHR 365

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
               AF+   +M + G   + VT+N +I   C   ++     ++ ++  +S FSPD  TY
Sbjct: 366 GSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKM-VESGFSPDCFTY 424

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I+GYCK GKM +A  + +EM   G+K    T N L+        +  A  +  +   
Sbjct: 425 NTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARK 484

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            GY+ D VT+ +LI GY ++ Q ++ LKL +EMK   +   + T+  +I  LC   + + 
Sbjct: 485 RGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQ 544

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L +L    LVP     N +I G+C  G V++A     +M E   KPD  T  IL+ 
Sbjct: 545 AVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLR 604

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           G C +G + + +++FN  +  G   D +T N +IS   K     +AF +M    E +NL+
Sbjct: 605 GLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEM-EGKNLE 663



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 192/443 (43%), Gaps = 47/443 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++R LC+ G  D    + D M S   +P+       +  C      DAA  L+ + 
Sbjct: 318 TYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEM 377

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V  +   +N ++     +   DEA  +  +       PD +T+N +I G  + G++
Sbjct: 378 KARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKM 437

Query: 278 KKAFEFFYDMGSFGCSPDI-----------------------------------VTYNTL 302
            +A++   +MG  G   D                                    VTY TL
Sbjct: 438 AEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTL 497

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G  +  +  R  +L +E+K ++     ++TY ++I G C  GK D+A    NE+   G
Sbjct: 498 IMGYFKDEQADRALKLWEEMK-ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKG 556

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P   T N++I G+   G +  A     +M+     PD+ T + L+ G CR G L +GL
Sbjct: 557 LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGL 616

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L +    K    +  T+ I+I++ CKE RL DA   + +++  +L P  + YN ++ G 
Sbjct: 617 TLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676

Query: 483 CKAGNVDEANVIVAEMEEK-----------RCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            KAG  +EA  +  +  EK                 + ++  I   C +G+  +A+ +F 
Sbjct: 677 TKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQ 736

Query: 532 KMLRIGCAPDDITVNSLISCLLK 554
           +  + G + +  T   L+  LLK
Sbjct: 737 QAEQKGVSLNKYTYIKLMDGLLK 759



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 189/413 (45%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C++        V + M   G LP+       V      GK D A  L  + 
Sbjct: 283 TYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKM 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++      YN+L++   +   +D A  + +E      + +  T NI+I+     G++
Sbjct: 343 ESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKI 402

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G SPD  TYNT+I+G C+  ++A  ++++ E+  K     D  T  +
Sbjct: 403 DEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG-LKLDTFTLNT 461

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   C   ++D A  +  +    G     VT+  LI G+ K      A  + E M   G
Sbjct: 462 LLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETG 521

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +  ++T++++I G C +G+ +Q +   +E+  K L P+  T  I+I+  C E  +  A 
Sbjct: 522 IVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAF 581

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +F  ++  + L P  F  N ++ G C+ G +++   +      K    D VT+ I+I   
Sbjct: 582 QFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSF 641

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C + R+ +A  +  +M      PD  T N++++ L K G   EA ++  + +E
Sbjct: 642 CKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAE 694



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 149/352 (42%), Gaps = 29/352 (8%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           E  R  L L+ +F T N ++ ++C E  L D+  +     R  G++ +       +    
Sbjct: 446 EMGRKGLKLD-TF-TLNTLLHTMCLEKQLDDAYTLTMK-ARKRGYILDEVTYGTLIMGYF 502

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           +  + D A  L  + +   +  +   YN+++  L      D+AV    E       PD  
Sbjct: 503 KDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDES 562

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T NI+I G    G V+KAF+F   M      PDI T N L+ GLCR   + +G  L    
Sbjct: 563 TSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFN-- 620

Query: 323 KFKSEFSP-DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
            + S+  P D VTY  +IS +CK  +++ A  +  EM    ++P   T+N ++ G  K G
Sbjct: 621 TWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAG 680

Query: 382 NMVSAEYMRERMLSFGYL-------PDVVT----FSSLIDGYCRNGQLNQGLKLCDEMKG 430
               AE +  +    G         P++ T    +S  I   C  G+    +KL  + + 
Sbjct: 681 RTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQ 740

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           K +S N YT+  L++ L K  +       L           PFM +  I  F
Sbjct: 741 KGVSLNKYTYIKLMDGLLKRRKSFTTTSLL-----------PFMVSATIQFF 781


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 209/396 (52%), Gaps = 8/396 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           ++ +V++  CE G    ++  FD +   R  G  PN  +    +  C + G+ + AK L 
Sbjct: 165 SFGIVIKGCCEAG---EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  + + Y  L++ L K     +   M+++       P+  T+N ++  L + 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  K AF+ F +M   G S +IVTYNTLI GLCR  +    +E++ ++K     +P+++T
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMK-SDGINPNLIT 340

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+C + K+ KA  +  ++ S G+ PS VT+N+L+ GF K G+   A  + + M 
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P  VT++ LID + R+  + + ++L   M+   L+P+V+T+++LI+  C + R+N
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMN 460

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A R  K +      P   +YN ++ G+CK G+   A  +  EMEEK   P+  ++  +I
Sbjct: 461 EASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              C + +  EA  +  KM+  G  P D  +N LIS
Sbjct: 521 EVLCKERKSKEAEGLVEKMIDSGIGPSDSILN-LIS 555



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 213/416 (51%), Gaps = 2/416 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + Y +++ +  +    DS    F+ M   G +P S      ++  + +   +      ++
Sbjct: 95  RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE 154

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +  +V +  + +  ++    +    +++  +  E       P+   +  LI G  + GE
Sbjct: 155 SKI-KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE 213

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++KA + F++MG FG   +  TY  LI GL +     +G E+ ++++    F P++ TY 
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVF-PNLHTYN 272

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            V++  CK G+   A  +++EM   G+  + VT+N LI G  +      A  + ++M S 
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSD 332

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+++T+++LIDG+C   +L + L LC ++K + LSP++ T+ IL++  CK+   + A
Sbjct: 333 GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + +K+++   + P    Y  +ID F ++ N+++A  + + MEE    PD  T+++LI G
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHG 452

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            C+KGRM EA  +F  M+     P+++  N+++    K G    A R+ +   E +
Sbjct: 453 FCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 195/370 (52%), Gaps = 1/370 (0%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +  C  AG+ + +  LL + R    + +  +Y +L++   K+   ++A  +F E  +   
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
             + WT+ +LI GL + G  K+ FE +  M   G  P++ TYN +++ LC+        +
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFK 289

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +  E++ +   S ++VTY ++I G C+  K ++A  + ++M S GI P+ +T+N LIDGF
Sbjct: 290 VFDEMRERG-VSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF 348

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             V  +  A  +   + S G  P +VT++ L+ G+C+ G  +   K+  EM+ + + P+ 
Sbjct: 349 CGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+TILI+   + + +  A +    ++   L P    Y+ +I GFC  G ++EA+ +   
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M EK+ +P++V +  +++G+C +G    A+ +F +M      P+  +   +I  L K   
Sbjct: 469 MVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 558 PNEAFRIMQR 567
             EA  ++++
Sbjct: 529 SKEAEGLVEK 538



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 3/223 (1%)

Query: 152 LNHSFKTYNLVMRSLCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +N +  TYN ++   C +  L  ++ +  D ++S G  P+       VS   + G    A
Sbjct: 334 INPNLITYNTLIDGFCGVRKLGKALSLCRD-LKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             ++ +     +  S   Y  L++   + +N ++A+ +      L   PD  T+++LI G
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHG 452

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
               G + +A   F  M      P+ V YNT++ G C+     R   L +E++ K E  P
Sbjct: 453 FCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEK-ELPP 511

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
           +V +Y  +I   CK  K  +A G+  +M   GI PS    N++
Sbjct: 512 NVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 34/242 (14%)

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP----------------------- 400
           K  +  + V+I+ + +  ++ S+ Y    M+  G++P                       
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150

Query: 401 -----------DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
                      DV +F  +I G C  G++ +   L  E++    SPNV  +T LI+  CK
Sbjct: 151 FFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCK 210

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +  +  A+    ++    LV   + Y  +I G  K G   +   +  +M+E    P+  T
Sbjct: 211 KGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHT 270

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  ++   C  GR  +A  +F++M   G + + +T N+LI  L +    NEA  +M +  
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMK 330

Query: 570 ED 571
            D
Sbjct: 331 SD 332


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 207/439 (47%), Gaps = 35/439 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N  M SLC+ G        FD M + GH P+       +      G       L +  
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     +YN L++A  K+   DEA+ +F +       PD WT+  +I   SR+G +
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRL 453

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M + G  PD + YN+LI G C    + +  EL+ E+  +    P+ V + S
Sbjct: 454 ADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNS 513

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK G++ +A  I++ +   G +P  +TFN LIDG+G VG M  A  + + M+S G
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN------------ 445
             PDVVT+S+L+DGYCRNG+++ GL L  EM  K + P   T+ I+++            
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 446 -----------------------ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                                   LC+ N  ++A    K+L   ++     + N +ID  
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K    +EAN +   +      P+  T+ ++I     +G + EA ++F+ M + GCAP  
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSS 753

Query: 543 ITVNSLISCLLKGGMPNEA 561
             +N++I  LL+ G  ++A
Sbjct: 754 RLLNNIIRVLLEKGEISKA 772



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 181/365 (49%), Gaps = 4/365 (1%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV- 246
           LP        +  C RA +      L  +F    +     + N LL  L     +D+AV 
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM--GSFGCSPDIVTYNTLIS 304
            +      L  +PDT +++ +++ L      ++A +  + M   S GCSP++V+YNT+I 
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           G  R  EV++   L  E+  +    PDVVTY+S I   CK   MDKA  +  +M S G +
Sbjct: 236 GFFREGEVSKACNLFHEM-MQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFE 294

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  VT+N +I G+  +G       M   M   G +PD+ T +S +   C++G+  +  + 
Sbjct: 295 PDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEF 354

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            D M  K   P++ T+++L++    E  + D       ++ N +V    +YN +ID + K
Sbjct: 355 FDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGK 414

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G +DEA +I  +M+E+   PD  T+  +I      GR+ +A+  FN+M+ +G  PD I 
Sbjct: 415 RGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIV 474

Query: 545 VNSLI 549
            NSLI
Sbjct: 475 YNSLI 479



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 186/382 (48%), Gaps = 4/382 (1%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           +HS   YN+++ +  + G+ D   ++F  M+  G +P++      +++  R G+   A  
Sbjct: 401 DHS--VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMD 458

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGL 271
             +Q     +   T +YNSL+       N  +A  +  E   R   +P+T  FN +I  L
Sbjct: 459 KFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSL 518

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G V +A + F  +   G  PD++T+N+LI G   V ++ +   +L +        PD
Sbjct: 519 CKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVL-DAMISVGIEPD 577

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTY++++ GYC+ G++D    ++ EM S G+KP+ +T+ +++ G    G  V A+ M  
Sbjct: 578 VVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCH 637

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G   D+ T   ++ G CRN   ++ + L  ++   N+  N+     +I+A+ K  
Sbjct: 638 EMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVR 697

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +  +A      +    LVP    Y  +I    K G+V+EA+ + + ME+  C P      
Sbjct: 698 KREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLN 757

Query: 512 ILIIGHCMKGRMVEAISIFNKM 533
            +I     KG + +A +  +K+
Sbjct: 758 NIIRVLLEKGEISKAGNYLSKV 779



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 185/433 (42%), Gaps = 37/433 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+  + +LC+    D  ++V   M S+G  P+       +      G+     G+  + 
Sbjct: 264 TYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM 323

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF------------- 264
               +    F  NS +++L K   + EA   F        +PD  T+             
Sbjct: 324 TRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYV 383

Query: 265 ----------------------NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                 NILI    + G + +A   F  M   G  PD  TY T+
Sbjct: 384 VDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTV 443

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+   R+  +A   +   ++       PD + Y S+I G+C  G + KA  + +EM S G
Sbjct: 444 IAAFSRMGRLADAMDKFNQM-IAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502

Query: 363 I-KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           I +P+ V FN +I+   K G +V A+ + + ++  G  PDV+TF+SLIDGY   G++ + 
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKA 562

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             + D M    + P+V T++ L++  C+  R++D     +++    + P    Y  ++ G
Sbjct: 563 FGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHG 622

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
               G    A  +  EM E     D  T  I++ G C      EAI++F K+  +    +
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFN 682

Query: 542 DITVNSLISCLLK 554
              +N++I  + K
Sbjct: 683 IAIINTMIDAMYK 695



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 140/314 (44%), Gaps = 2/314 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P   T+NIL+    R       F  F      G   D++  N L+  LC          +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDG 376
           L     +    PD ++Y++V+   C+  +  +A  + + M   S G  P+ V++N +I G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F + G +  A  +   M+  G +PDVVT+SS ID  C+   +++   +  +M      P+
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T+  +I+      +  +     +++    L+P  F  N  +   CK G   EA     
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K  KPD VT+++L+ G+  +G +V+ +++FN M   G   D    N LI    K G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 557 MPNEAFRIMQRASE 570
           M +EA  I  +  E
Sbjct: 417 MMDEAMLIFTQMQE 430



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 100/234 (42%), Gaps = 1/234 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +++ +     TY+ ++   C  G  D   ++F  M S G  P +      +      G+ 
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             AK +  +      TM       +L  L + N  DEA+ +FK+   +  + +    N +
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I  + ++ + ++A E F  + + G  P+  TY  +I+ L +   V     +   ++ KS 
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLME-KSG 748

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
            +P      ++I    + G++ KA    ++++   I   A T ++++  F + G
Sbjct: 749 CAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKG 802


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 202/410 (49%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  +   G       VFD M     LPN       +   I+ G  +A   L  Q 
Sbjct: 65  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN LL+ L +     E   +  E       PD +T++IL  GLSR G+ 
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K     F      G +    T + L++GLC+  +V+   E+L+ +   +   P  V Y +
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL-VNAGLVPTRVIYNT 243

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC+ G+++ A   + +M S  IKP  +T+N LI+G  K   + +A+ +   M   G
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 303

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y R GQL +   +  EM+   L PNV ++  ++NA CK  ++ +A 
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +   D++P   +YN +ID + + G  D+A ++V +M+     P  VT+ +LI G 
Sbjct: 364 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C + ++ EA  I N +      PD ++ N+LIS     G  ++A  + QR
Sbjct: 424 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 473



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 207/404 (51%), Gaps = 2/404 (0%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-RPGEVT 223
           +L  +G H  V+  F  + S G  P++      V +C+ AG    A G+L +  R G   
Sbjct: 1   ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
            + F YN ++  + +     +AV +F E       P+  T+N +I G  + G+++  F  
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G  P+ +TYN L+SGLCR   +     LL E+    +  PD  TY+ +  G  
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSILFDGLS 179

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           + G       ++ +    G+     T ++L++G  K G +  AE + + +++ G +P  V
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            +++LI+GYC+ G+L        +MK +++ P+  T+  LIN LCK  R+ +A+  L ++
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           + N + P    +N +ID + + G +++  ++++EM+E   KP+ V++  ++   C  G++
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            EA++I + M      P+    N++I   ++ G  ++AF ++++
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 403



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 205/421 (48%), Gaps = 3/421 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  ++   + D M   G  PN+      +S   RAG+      LL + 
Sbjct: 100 TYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM 159

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++    F Y+ L + L +  ++   + +F +Y +       +T +IL+ GL + G+V
Sbjct: 160 ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKV 219

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    + + G  P  V YNTLI+G C+  E+        ++K +    PD +TY +
Sbjct: 220 SIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR-HIKPDHITYNA 278

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK  ++  A  +  EM   G+ P+  TFN LID +G+ G +     +   M   G
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 338

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV++ S+++ +C+NG++ + + + D+M  K++ PN   +  +I+A  +    + A 
Sbjct: 339 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 398

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++++K N + P    YN +I G C    + EA  I+  +   R  PD V++  LI   
Sbjct: 399 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 458

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           C +G + +A+ +  +M + G      T + LIS L   G  NE   + Q+    QN  +P
Sbjct: 459 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM--QNNVVP 516

Query: 578 S 578
           S
Sbjct: 517 S 517



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 191/399 (47%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G       + D M S   +P+            R G   A   L  ++
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 194

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT+  +  + LLN L K      A  + +        P    +N LI G  + GE+
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M S    PD +TYN LI+GLC+   +    +LL E++  +  +P V T+ +
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ-DNGVNPTVETFNT 313

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G+++K   + +EM   G+KP+ V++  +++ F K G +  A  + + M    
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 373

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+   ++++ID Y  +G  +Q   L ++MK   +SP++ T+ +LI  LC ++++++A 
Sbjct: 374 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 433

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  L  + L+P    YN +I   C  GN+D+A  +   M +   K    T+  LI G 
Sbjct: 434 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 493

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
              GR+ E   ++ KM++    P +   N ++    K G
Sbjct: 494 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 532



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 161/316 (50%), Gaps = 2/316 (0%)

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP-DIVTYNTLISGLCRVNEVARG 315
           ++PDT+ +N  +Q     G++ +A      MG  G  P +  +YN +I+G+ R       
Sbjct: 23  ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 82

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            E+  E+  ++   P+ +TY ++I G+ K G ++    + ++M   G+KP+A+T+NVL+ 
Sbjct: 83  VEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 141

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  + G M     + + M S   +PD  T+S L DG  RNG     L L  +     ++ 
Sbjct: 142 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 201

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
             YT +IL+N LCK+ +++ A   L+ L    LVP   +YN +I+G+C+ G ++ A    
Sbjct: 202 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 261

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M+ +  KPD +T+  LI G C   R+  A  +  +M   G  P   T N+LI    + 
Sbjct: 262 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 321

Query: 556 GMPNEAFRIMQRASED 571
           G   + F ++    E+
Sbjct: 322 GQLEKCFIVLSEMQEN 337



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 165/349 (47%), Gaps = 1/349 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++  LC+ G     + V   + + G +P   +    ++   + G+ + A     Q 
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 264

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +      YN+L+N L K      A  +  E       P   TFN LI    R G++
Sbjct: 265 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K F    +M   G  P++V+Y ++++  C+  ++     +L ++ F  +  P+   Y +
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-FHKDVLPNAQVYNA 383

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G  D+A  +  +M S GI PS VT+N+LI G      +  AE +   + +  
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD V++++LI   C  G +++ L L   M    +   V T+  LI+ L    RLN+  
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 503

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
              +++  N++VP   ++N +++ + K GN  +A  +  EM +KR   D
Sbjct: 504 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 552



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 134/318 (42%), Gaps = 36/318 (11%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN--------------- 190
           S VN  L  +   YN ++   C+ G  +     F  M+S    P+               
Sbjct: 228 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 287

Query: 191 -----------------SPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                            +P +E F   + +  R G+ +    +LS+ +   +  +   Y 
Sbjct: 288 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 347

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           S++NA  K     EAV +  + F     P+   +N +I      G   +AF     M S 
Sbjct: 348 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 407

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G SP IVTYN LI GLC  ++++   E++  +       PD V+Y ++IS  C  G +DK
Sbjct: 408 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLS-NHRLIPDAVSYNTLISACCYRGNIDK 466

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +   M+  GIK +  T++ LI G G  G +   EY+ ++M+    +P     + +++
Sbjct: 467 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 526

Query: 411 GYCRNGQLNQGLKLCDEM 428
            Y + G   +   L  EM
Sbjct: 527 AYSKYGNEIKAEDLRKEM 544



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 119/245 (48%), Gaps = 1/245 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            +N + +T+N ++ +    G  +   +V   M+ +G  PN       V++  + GK   A
Sbjct: 303 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 362

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +L      +V  +  +YN++++A V+    D+A  + ++       P   T+N+LI+G
Sbjct: 363 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L    ++ +A E    + +    PD V+YNTLIS  C    + +  +L + +  K     
Sbjct: 423 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM-HKYGIKS 481

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            V TY  +ISG    G++++   +Y +M    + PS    N++++ + K GN + AE +R
Sbjct: 482 TVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 541

Query: 391 ERMLS 395
           + ML 
Sbjct: 542 KEMLQ 546



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP--FMYNPVIDGFCKAGNVDEAN 492
           P+ + +   + A      L +A   L+++   D  P P  F YN VI G  +AG   +A 
Sbjct: 25  PDTFAWNKAVQACVAAGDLGEAVGMLRRM-GRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 83

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  EM E+   P+ +T+  +I GH   G +     + ++M+  G  P+ IT N L+S L
Sbjct: 84  EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGL 143

Query: 553 LKGGMPNEAFRIMQRASEDQ 572
            + G   E   ++   +  +
Sbjct: 144 CRAGRMGETSALLDEMASQK 163


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N ++   C+ GL D    V D M + G  P +     ++ +    G+ D A+ LLS  
Sbjct: 346 SFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM 405

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V      YN+L++  +K     EA  +F +       P   T+N LI GL   G +
Sbjct: 406 AAPDVVS----YNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNL 461

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A     +M S    PD++TY TL+ G  +   ++   E+  E+  +    PD   YT+
Sbjct: 462 EGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEM-LRKGIKPDGYAYTT 520

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIK-PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
              G  +LG  +KA  ++ EM +     P    +NV IDG  KVGN+  A   + ++   
Sbjct: 521 RTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRV 580

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD VT++++I GY   G+      L DEM  K LSP+V T+ +LI+   K  RL  A
Sbjct: 581 GLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQA 640

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            ++  ++K   + P    +N ++ G CKAGN+DEA   + +MEE+   P+K ++TILI  
Sbjct: 641 FQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISK 700

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           HC   +  E + ++ +ML     PD  T  +L   L K
Sbjct: 701 HCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 738



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 212/453 (46%), Gaps = 41/453 (9%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +  N+V+R L +  + +  Q V++ M   G +P        + SC +AG  +    + 
Sbjct: 238 SVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIW 297

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +   +  S   YN L+N   K    +EA     +  R       ++FN LI+G  + 
Sbjct: 298 LEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQ 357

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G   +A+    +M + G  P   TYN  I  LC    +    ELL  +      +PDVV+
Sbjct: 358 GLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA-----APDVVS 412

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +++ GY K+ K  +A+ +++++ +  I PS VT+N LIDG  + GN+  A+ ++E M 
Sbjct: 413 YNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 472

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT------------- 441
           S    PDV+T+++L+ G+ +NG L+   ++ DEM  K + P+ Y +T             
Sbjct: 473 SQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSE 532

Query: 442 -----------------------ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
                                  + I+ LCK   L  A  F +++    LVP    Y  V
Sbjct: 533 KAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTV 592

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I G+ + G    A  +  EM  KR  P  +T+ +LI GH   GR+ +A     +M + G 
Sbjct: 593 IRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGV 652

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            P+ +T N+L+  + K G  +EA+R + +  E+
Sbjct: 653 RPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEE 685



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 170/339 (50%), Gaps = 8/339 (2%)

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K++ A++ +  F++  R    P     NI+++ L     + KA E +  M   G  P +
Sbjct: 215 TKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTV 274

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +T+NT++    +  ++ R  ++  E+K ++ EFS   VTY  +I+G+ K GKM++A   +
Sbjct: 275 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE--VTYNILINGFSKSGKMEEARRFH 332

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            +M   G   +  +FN LI+G+ K G    A  + + ML+ G  P   T++  I   C  
Sbjct: 333 GDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEF 392

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G+++   +L   M     +P+V ++  L++   K  +  +A      LK  ++ P    Y
Sbjct: 393 GRIDDARELLSSMA----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTY 448

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +IDG C++GN++ A  +  EM  +   PD +T+T L+ G    G +  A  I+++MLR
Sbjct: 449 NTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLR 508

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQR-ASEDQN 573
            G  PD     +     L+ G   +AFR+ +   +ED +
Sbjct: 509 KGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHH 547



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 140/302 (46%), Gaps = 2/302 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N S  TYN ++  LCE G  +  Q + + M S    P+       +   ++ G    A
Sbjct: 440 NINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMA 499

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQ 269
             +  +     +    + Y +     ++  ++++A  + +E     +  PD   +N+ I 
Sbjct: 500 TEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRID 559

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL ++G ++KA EF   +   G  PD VTY T+I G           +L  E+      S
Sbjct: 560 GLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEM-LSKRLS 618

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V+TY  +I G+ K G++++A     EM   G++P+ +T N L+ G  K GN+  A   
Sbjct: 619 PSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRY 678

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             +M   G  P+  +++ LI  +C   +  + +KL  EM  K + P+ YT   L   L K
Sbjct: 679 LCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 738

Query: 450 EN 451
           ++
Sbjct: 739 DH 740



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 4/213 (1%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           Y K    +K    + +M   G  PS    N+++        M  A+ + E M+  G +P 
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V+TF++++D   + G L +  K+  EMK +N+  +  T+ ILIN   K  ++ +ARRF  
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            ++ +     P+ +NP+I+G+CK G  DEA  +  EM      P   T+ I I   C  G
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           R+ +A  + + M     APD ++ N+L+   +K
Sbjct: 394 RIDDARELLSSM----AAPDVVSYNTLMHGYIK 422



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%)

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y +     + L   ++M  K   P+V    I++  L     +N A+   + +  + ++P 
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +N ++D   KAG+++  + I  EM+ +  +  +VT+ ILI G    G+M EA     
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            M R G      + N LI    K G+ +EA+ +
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGV 366


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 205/417 (49%), Gaps = 11/417 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+R LC  G       V D M S   +P  PM    + S  R+G   +A  +L   
Sbjct: 118 TYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEAL 177

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRI 274
                T+ T   N ++NA+  Q   DE + M ++      + D  ++N +++GL    R 
Sbjct: 178 HAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRW 237

Query: 275 GEVK-------KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           G+V+       K  E    M   GC+PDI  Y T+I G+C+       +E+L  +     
Sbjct: 238 GDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYG- 296

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+VV Y +V+ G C   + +KA  +  EM         VTFN+L+D F + G +    
Sbjct: 297 LKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVI 356

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E+ML  G +PDV+T++++I+G+C+ G +++ + L   M      PN  ++TI++  L
Sbjct: 357 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGL 416

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C   R  DA   + ++     +P P  +N +I+  CK G V++A  ++ +M    C PD 
Sbjct: 417 CSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDL 476

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ++++ +I G    G+  EA+ + N M+  G  P+ IT +S+   L + G  ++  ++
Sbjct: 477 ISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQM 533



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 206/418 (49%), Gaps = 21/418 (5%)

Query: 162 VMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           ++RSLC  G   D+V+ +     + G +  + M+  +     R G+ +AA+ L +     
Sbjct: 58  LIRSLCVAGRTADAVRALDAAGNAAGVVDYNAMVAGYC----RVGQVEAARRLAAAV--- 110

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
            V  + + Y  ++  L  +    +A+ +  E       P    ++++I+   R G    A
Sbjct: 111 PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSA 170

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-FKSEFSPDVVTYTSVI 339
                 + + G + D    N +I+ +C    V  G E+L+++  F  E   D+V+Y +V+
Sbjct: 171 LRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCE--ADIVSYNAVL 228

Query: 340 SGYCKLGK-------MDKATGIY---NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            G C   +       MD+   ++   ++M   G  P    +  +IDG  K G+   A  +
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             RM S+G  P+VV +++++ G C   +  +  +L  EM  KN   +  TF IL++  C+
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              ++     L+Q+  +  +P    Y  VI+GFCK G +DEA +++  M    CKP+ ++
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTIS 408

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +TI++ G C   R V+A  + ++M++ GC P+ +T N++I+ L K G+  +A  ++++
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQ 466



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 162/347 (46%), Gaps = 1/347 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            + Y  ++  +C+ G H+    +   M S G  PN       +     A + + A+ LL+
Sbjct: 266 IRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLT 325

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +       +    +N L++   +    D  + + ++       PD  T+  +I G  + G
Sbjct: 326 EMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 385

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + +A     +M S GC P+ ++Y  ++ GLC         EL+  +  +    P+ VT+
Sbjct: 386 LIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRM-IQQGCLPNPVTF 444

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I+  CK G +++A  +  +M   G  P  ++++ +IDG GK G    A  +   M++
Sbjct: 445 NTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMIN 504

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+V+T+SS+     R G++++ +++ D ++   +  +   +  +I++LCK    + 
Sbjct: 505 KGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDL 564

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           A  FL  +  N  +P    Y  +I G    G + EA  +++E+  +R
Sbjct: 565 AIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRR 611



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 147/349 (42%), Gaps = 54/349 (15%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            + LI+ L   G    A      + + G +  +V YN +++G CRV +V     L   V 
Sbjct: 55  LSALIRSLCVAGRTADAVRA---LDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P+  TY  V+ G C  G++  A  + +EM S    P    ++V+I+   + G  
Sbjct: 112 VP----PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGY 167

Query: 384 VSA------------------------------------EYMRERMLSFGYLPDVVTFSS 407
            SA                                    E +R+  L FG   D+V++++
Sbjct: 168 SSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPL-FGCEADIVSYNA 226

Query: 408 LIDGYCRNGQLNQGLKLCDE----------MKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++ G C   +     +L DE          M     +P++  +  +I+ +CKE     A 
Sbjct: 227 VLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVAN 286

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++    L P    YN V+ G C A   ++A  ++ EM +K C  D VTF IL+   
Sbjct: 287 EILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFF 346

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C  G +   I +  +ML  GC PD IT  ++I+   K G+ +EA  +++
Sbjct: 347 CQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 395


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 180/334 (53%), Gaps = 1/334 (0%)

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           ++LN LV++   D     ++        PD   +++L Q   + G   K  +   +M S 
Sbjct: 203 AILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSL 262

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  P++  Y   I  LCR N++    ++ + +K      P++ TY+++I GYCK G + +
Sbjct: 263 GVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHG-VVPNLYTYSAMIDGYCKTGNLRQ 321

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A G+Y E+    + P+ V F  L+DGF K   +V+A  +   M+ FG  P++  ++ LI 
Sbjct: 322 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIH 381

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G C++G + + + L  EM+  NLSP+V+T+TILIN LC E RL +A R  +++K   + P
Sbjct: 382 GQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFP 441

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               YN +I GFCK  N+++A  + +EM     +P+ +TF+ LI G+C    +  A+ ++
Sbjct: 442 SSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLY 501

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +M   G  PD +T  +LI    K     EA R+
Sbjct: 502 FEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRL 535



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 200/400 (50%), Gaps = 10/400 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y + +R LC     +  + +F+ M+  G +PN       +    + G    A GL  +  
Sbjct: 271 YTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEIL 330

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             E+  +  ++ +L++   K      A  +F    +    P+ + +N LI G  + G + 
Sbjct: 331 VAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNML 390

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A     +M S   SPD+ TY  LI+GLC    +A  + L + +K +  F P  VTY S+
Sbjct: 391 EAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIF-PSSVTYNSL 449

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK   ++KA  + +EM S G++P+ +TF+ LIDG+ KV N+ +A  +   M   G 
Sbjct: 450 IHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGI 509

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +PDVVT+++LID + +   + + L+L  +M    + PN +TF  L++   KE RL+DA  
Sbjct: 510 VPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAID 569

Query: 459 FL----KQLKWNDLVP----KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           F     +      +V     K   +  +I+G C+ G +  A+   ++M+     PD  ++
Sbjct: 570 FYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSY 629

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             ++  H  + R+ + + +   M++ G  P ++ VN L++
Sbjct: 630 VSMLKAHLREKRITDTMMLHCDMIKTGILP-NLMVNQLLA 668



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 206/442 (46%), Gaps = 13/442 (2%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           L+ LN L   +R D+  +  + +    ++  L      Y+++ +   + G     + + D
Sbjct: 202 LAILNGLVRRRRFDSVWVDYQLM----ISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLD 257

Query: 181 YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
            M S G  PN  +   ++    R  K + A+ +    +   V  + + Y+++++   K  
Sbjct: 258 EMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTG 317

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           N  +A  ++KE       P+   F  L+ G  +  E+  A   F  M  FG  P++  YN
Sbjct: 318 NLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYN 377

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI G C+   +     LL E++     SPDV TYT +I+G C   ++ +A  ++  M +
Sbjct: 378 CLIHGQCKSGNMLEAMGLLSEME-SLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKN 436

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             I PS+VT+N LI GF K  N+  A  +   M S G  P+++TFS+LIDGYC+   +  
Sbjct: 437 ERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKA 496

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            + L  EM  K + P+V T+T LI+A  KE  + +A R    +    + P    +  ++D
Sbjct: 497 AMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 556

Query: 481 GFCKAGNVDEANVIVAEMEE--------KRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           GF K G + +A     E  +        +R     V FT LI G C  G ++ A   F+ 
Sbjct: 557 GFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSD 616

Query: 533 MLRIGCAPDDITVNSLISCLLK 554
           M   G  PD  +  S++   L+
Sbjct: 617 MKSGGVTPDIWSYVSMLKAHLR 638



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 116/244 (47%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SPD     ++++G  +  + D     Y  M S G+ P    ++VL     K G     E 
Sbjct: 195 SPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEK 254

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M S G  P+V  ++  I   CR  ++ +  K+ + MK   + PN+YT++ +I+  C
Sbjct: 255 LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYC 314

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K   L  A    K++   +L+P   ++  ++DGFCKA  +  A  +   M +    P+  
Sbjct: 315 KTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLY 374

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            +  LI G C  G M+EA+ + ++M  +  +PD  T   LI+ L       EA R+ QR 
Sbjct: 375 VYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRM 434

Query: 569 SEDQ 572
             ++
Sbjct: 435 KNER 438



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/345 (19%), Positives = 128/345 (37%), Gaps = 43/345 (12%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   ++ +   YN ++   C+ G       +   M S    P+       ++      + 
Sbjct: 365 VKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERL 424

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  L  + +   +  S+  YNSL++   K+ N ++A+ +  E      +P+  TF+ L
Sbjct: 425 AEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTL 484

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---------------------- 305
           I G  ++  +K A   +++M   G  PD+VTY TLI                        
Sbjct: 485 IDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGI 544

Query: 306 -------LCRVNEVARGHELLKEVKFKSEFSPDV-------------VTYTSVISGYCKL 345
                   C V+   +   L   + F  E +                V +T +I G C+ 
Sbjct: 545 HPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQN 604

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G + +A+  +++M S G+ P   ++  ++    +   +     +   M+  G LP+++  
Sbjct: 605 GYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVN 664

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL-CK 449
             L   Y  NG L     L +  +   +  N      LI    CK
Sbjct: 665 QLLAMFYQENGYLRSACFLTNSSRLGTIFKNTCNSIFLITVFHCK 709


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 211/438 (48%), Gaps = 46/438 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T++ ++   C  G       + D M      P+   +   ++     G+   A  L+ + 
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P EVT     Y  +LN L K  N+  A+ +F++      +     ++I+I  L 
Sbjct: 202 VEYGFQPDEVT-----YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G    A   F +M   G   D+VTY++LI GLC   +   G ++L+E+       PDV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPDV 315

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VT++++I  + K GK+ +A  +YNEM + GI P  +T+N LIDGF K   +  A  M + 
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375

Query: 393 MLSFGYLPDVVTFSSLID-----------------------------------GYCRNGQ 417
           M+S G  PD+VT+S LI+                                   G+C++G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           LN   +L  EM  + + P+V T+ IL++ LC    LN A    ++++ + +     +YN 
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I G C A  VD+A  +   + +K  KPD VT+ ++I G C KG + EA  +F KM   G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555

Query: 538 CAPDDITVNSLISCLLKG 555
           C PDD T N LI   L G
Sbjct: 556 CTPDDFTYNILIRAHLGG 573



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 203/395 (51%), Gaps = 1/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+ G       +F  M       +       + S  + G  D A  L ++ 
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+SL+  L      D+   M +E       PD  TF+ LI    + G++
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E + +M + G +PD +TYN+LI G C+ N +   +++  ++       PD+VTY+ 
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSI 390

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+ YCK  ++D    ++ E++S G+ P+ +T+N L+ GF + G + +A+ + + M+S G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT+  L+DG C NG+LN+ L++ ++M+   ++  +  + I+I+ +C  ++++DA 
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I G CK G++ EA+++  +M+E  C PD  T+ ILI  H
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                ++ ++ +  +M   G + D  T+  +I  L
Sbjct: 571 LGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 208/430 (48%), Gaps = 7/430 (1%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRS-LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           G   L +S    S+  +  +Y   +R+ + ++ ++D++ + F+ M     LP        
Sbjct: 22  GTSLLHYS----SITEAKLSYKERLRNGIVDIKVNDAIDL-FESMIQSRPLPTPIDFNRL 76

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
            S+  R  + D   G         +    +    ++N   ++     A  +    ++L  
Sbjct: 77  CSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY 136

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PDT TF+ L+ G    G V +A      M      PD+VT +TLI+GLC    V+    
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L+  +  +  F PD VTY  V++  CK G    A  ++ +M    IK S V ++++ID  
Sbjct: 197 LIDRM-VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G+   A  +   M   G   DVVT+SSLI G C +G+ + G K+  EM G+N+ P+V
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            TF+ LI+   KE +L +A+    ++    + P    YN +IDGFCK   + EAN +   
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K C+PD VT++ILI  +C   R+ + + +F ++   G  P+ IT N+L+    + G 
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435

Query: 558 PNEAFRIMQR 567
            N A  + Q 
Sbjct: 436 LNAAKELFQE 445



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 1/347 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           T  +++L+N    +    EAV +      +  +PD  T + LI GL   G V +A     
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M  +G  PD VTY  +++ LC+    A   +L ++++ ++     VV Y+ VI   CK 
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN-IKASVVQYSIVIDSLCKD 258

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G  D A  ++NEM   GIK   VT++ LI G    G       M   M+    +PDVVTF
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S+LID + + G+L +  +L +EM  + ++P+  T+  LI+  CKEN L++A +    +  
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    Y+ +I+ +CKA  VD+   +  E+  K   P+ +T+  L++G C  G++  
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           A  +F +M+  G  P  +T   L+  L   G  N+A  I ++  + +
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 1/185 (0%)

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E M+    LP  + F+ L     R  Q +  L  C  M+   +  ++YT TI+IN  C++
Sbjct: 59  ESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK 118

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            +L  A   L +       P    ++ +++GFC  G V EA  +V  M E + +PD VT 
Sbjct: 119 KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV 178

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + LI G C+KGR+ EA+ + ++M+  G  PD++T   +++ L K G    A  +  R  E
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF-RKME 237

Query: 571 DQNLQ 575
           ++N++
Sbjct: 238 ERNIK 242



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 60/152 (39%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++  LC+ G  +    +F+ M+         +    +     A K D A  L 
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  V      YN ++  L K+ +  EA  +F++       PD +T+NILI+     
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
             +  + E   +M   G S D  T   +I  L
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVIDML 605


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 202/410 (49%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  +   G       VFD M     LPN       +   I+ G  +A   L  Q 
Sbjct: 17  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 76

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN LL+ L +     E   +  E       PD +T++IL  GLSR G+ 
Sbjct: 77  VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 136

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K     F      G +    T + L++GLC+  +V+   E+L+ +   +   P  V Y +
Sbjct: 137 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL-VNAGLVPTRVIYNT 195

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC+ G+++ A   + +M S  IKP  +T+N LI+G  K   + +A+ +   M   G
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 255

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y R GQL +   +  EM+   L PNV ++  ++NA CK  ++ +A 
Sbjct: 256 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 315

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +   D++P   +YN +ID + + G  D+A ++V +M+     P  VT+ +LI G 
Sbjct: 316 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C + ++ EA  I N +      PD ++ N+LIS     G  ++A  + QR
Sbjct: 376 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 425



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 205/421 (48%), Gaps = 3/421 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  ++   + D M   G  PN+      +S   RAG+      LL + 
Sbjct: 52  TYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM 111

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++    F Y+ L + L +  ++   + +F +Y +       +T +IL+ GL + G+V
Sbjct: 112 ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKV 171

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    + + G  P  V YNTLI+G C+  E+        ++K +    PD +TY +
Sbjct: 172 SIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR-HIKPDHITYNA 230

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK  ++  A  +  EM   G+ P+  TFN LID +G+ G +     +   M   G
Sbjct: 231 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 290

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV++ S+++ +C+NG++ + + + D+M  K++ PN   +  +I+A  +    + A 
Sbjct: 291 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 350

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++++K N + P    YN +I G C    + EA  I+  +   R  PD V++  LI   
Sbjct: 351 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 410

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           C +G + +A+ +  +M + G      T + LIS L   G  NE   + Q+    QN  +P
Sbjct: 411 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM--QNNVVP 468

Query: 578 S 578
           S
Sbjct: 469 S 469



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 191/399 (47%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G       + D M S   +P+            R G   A   L  ++
Sbjct: 87  TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 146

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT+  +  + LLN L K      A  + +        P    +N LI G  + GE+
Sbjct: 147 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 206

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M S    PD +TYN LI+GLC+   +    +LL E++  +  +P V T+ +
Sbjct: 207 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ-DNGVNPTVETFNT 265

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G+++K   + +EM   G+KP+ V++  +++ F K G +  A  + + M    
Sbjct: 266 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 325

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+   ++++ID Y  +G  +Q   L ++MK   +SP++ T+ +LI  LC ++++++A 
Sbjct: 326 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 385

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  L  + L+P    YN +I   C  GN+D+A  +   M +   K    T+  LI G 
Sbjct: 386 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 445

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
              GR+ E   ++ KM++    P +   N ++    K G
Sbjct: 446 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 182/350 (52%), Gaps = 1/350 (0%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G    + F YN ++  + +     +AV +F E       P+  T+N +I G  + G++
Sbjct: 7   RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 66

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +  F     M   G  P+ +TYN L+SGLCR   +     LL E+    +  PD  TY+ 
Sbjct: 67  EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA-SQKMVPDGFTYSI 125

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +  G  + G       ++ +    G+     T ++L++G  K G +  AE + + +++ G
Sbjct: 126 LFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 185

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P  V +++LI+GYC+ G+L        +MK +++ P+  T+  LIN LCK  R+ +A+
Sbjct: 186 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 245

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L +++ N + P    +N +ID + + G +++  ++++EM+E   KP+ V++  ++   
Sbjct: 246 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 305

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C  G++ EA++I + M      P+    N++I   ++ G  ++AF ++++
Sbjct: 306 CKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEK 355



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 165/349 (47%), Gaps = 1/349 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++  LC+ G     + V   + + G +P   +    ++   + G+ + A     Q 
Sbjct: 157 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 216

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +      YN+L+N L K      A  +  E       P   TFN LI    R G++
Sbjct: 217 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 276

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K F    +M   G  P++V+Y ++++  C+  ++     +L ++ F  +  P+   Y +
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-FHKDVLPNAQVYNA 335

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G  D+A  +  +M S GI PS VT+N+LI G      +  AE +   + +  
Sbjct: 336 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD V++++LI   C  G +++ L L   M    +   V T+  LI+ L    RLN+  
Sbjct: 396 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
              +++  N++VP   ++N +++ + K GN  +A  +  EM +KR   D
Sbjct: 456 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 504



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 146/286 (51%), Gaps = 2/286 (0%)

Query: 287 MGSFGCSP-DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           MG  G  P +  +YN +I+G+ R        E+  E+  ++   P+ +TY ++I G+ K 
Sbjct: 5   MGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL-PNHITYNTMIDGHIKG 63

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G ++    + ++M   G+KP+A+T+NVL+ G  + G M     + + M S   +PD  T+
Sbjct: 64  GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S L DG  RNG     L L  +     ++   YT +IL+N LCK+ +++ A   L+ L  
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             LVP   +YN +I+G+C+ G ++ A     +M+ +  KPD +T+  LI G C   R+  
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 243

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           A  +  +M   G  P   T N+LI    + G   + F ++    E+
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 289



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 134/318 (42%), Gaps = 36/318 (11%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN--------------- 190
           S VN  L  +   YN ++   C+ G  +     F  M+S    P+               
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 191 -----------------SPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                            +P +E F   + +  R G+ +    +LS+ +   +  +   Y 
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 299

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           S++NA  K     EAV +  + F     P+   +N +I      G   +AF     M S 
Sbjct: 300 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G SP IVTYN LI GLC  ++++   E++  +       PD V+Y ++IS  C  G +DK
Sbjct: 360 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLS-NHRLIPDAVSYNTLISACCYRGNIDK 418

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +   M+  GIK +  T++ LI G G  G +   EY+ ++M+    +P     + +++
Sbjct: 419 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 478

Query: 411 GYCRNGQLNQGLKLCDEM 428
            Y + G   +   L  EM
Sbjct: 479 AYSKYGNEIKAEDLRKEM 496



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 119/245 (48%), Gaps = 1/245 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            +N + +T+N ++ +    G  +   +V   M+ +G  PN       V++  + GK   A
Sbjct: 255 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 314

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +L      +V  +  +YN++++A V+    D+A  + ++       P   T+N+LI+G
Sbjct: 315 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 374

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L    ++ +A E    + +    PD V+YNTLIS  C    + +  +L + +  K     
Sbjct: 375 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM-HKYGIKS 433

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            V TY  +ISG    G++++   +Y +M    + PS    N++++ + K GN + AE +R
Sbjct: 434 TVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLR 493

Query: 391 ERMLS 395
           + ML 
Sbjct: 494 KEMLQ 498



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 50/103 (48%)

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P  F YN VI G  +AG   +A  +  EM E+   P+ +T+  +I GH   G +     +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            ++M+  G  P+ IT N L+S L + G   E   ++   +  +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 115


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 215/460 (46%), Gaps = 38/460 (8%)

Query: 138 LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           +  K LE S V   +    + + L+   L        V  +F  + S G +      +  
Sbjct: 1   MAAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLV 60

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           V     AG  + A  L+ +   G  T + F+YN ++  L + +   +A  + ++      
Sbjct: 61  VDGLCGAGMANQALELVREL-SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P+ +T+ IL+ GL R  + K A E F +M   GC P+ +TY TLI  L R  E+     
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           ++ E +   E   DV+T T+++ G CK  ++D A     EM   G++P+ VT++ L+ GF
Sbjct: 180 VMIEQR-SLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238

Query: 378 ------------------GKVGNMVSAEY------------------MRERMLSFGYLPD 401
                              K G++ +A Y                    E +   G +PD
Sbjct: 239 RQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD 298

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VVT+S LI+ + R GQ +  L+L ++M+   + P+V T++ LIN LCKE +  DA R L+
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            ++     P    YN V+DG CK+G +DE + +   M + RC PD VT++I++ G    G
Sbjct: 359 LMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAG 418

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +  A+ +F  +      PD    + +I+ L + G   EA
Sbjct: 419 MLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 214/452 (47%), Gaps = 43/452 (9%)

Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY LV+  LC  G+ + ++++V +   S  + P   +    ++   RA +   A  +L +
Sbjct: 56  TYKLVVDGLCGAGMANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEK 113

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  + F Y  LLN L + N    A  +F+E  R   +P+  T+  LIQ LSR GE
Sbjct: 114 MVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGE 173

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A     +  S     D++T  T++ GLC+ + +    + ++E++ +    P+ VTY+
Sbjct: 174 IDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMR-QMGVRPNEVTYS 232

Query: 337 SVISGY------------------------------------CKLGKMDKATGIYNEMNS 360
           +++ G+                                    CK G +D+A     E+  
Sbjct: 233 NLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQ 292

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+ P  VT+++LI+ F + G   ++  + E M   G  PDVVT+S+LI+  C+  +   
Sbjct: 293 SGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQD 352

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             +L + M+     PNV T+  +++ LCK  ++++  R  + +  +   P    Y+ +++
Sbjct: 353 AFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMN 412

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G  KAG +D A  +   ++  R  PD   ++++I   C  G++ EA  +++ M  +  A 
Sbjct: 413 GLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM-EVTVAG 471

Query: 541 DDI--TVNSLISCLLKGGMPNEAFRIMQRASE 570
           D+I   +  L++ L      + A RI++ ASE
Sbjct: 472 DNICRALAGLVAALCDAERTDSARRIVEVASE 503



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 133/266 (50%), Gaps = 5/266 (1%)

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +LL+    ++    D   +T + +   +  K  +   ++  + S G+     T+ +++DG
Sbjct: 4   KLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDG 63

Query: 377 FGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
               G    A E +RE  LS  Y P +  ++ +I G CR  ++    K+ ++M  +++ P
Sbjct: 64  LCGAGMANQALELVRE--LSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV+T+TIL+N LC+ N+   AR   +++K N   P P  Y  +I    +AG +DEA  ++
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            E        D +T T ++ G C   R+ +A+    +M ++G  P+++T ++L+    + 
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 556 GMPNEAFRIM--QRASEDQNLQLPSW 579
           G  +   R    ++A +  +L+  ++
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAY 267



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 1/220 (0%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           ++F E  +     +     Y   + +LC+ G  D  +   + +R  G +P+       ++
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLIN 307

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           +  RAG+ DA+  LL   R   V      Y++L+N L K+    +A  + +      S P
Sbjct: 308 TFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPP 367

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +  T+N ++ GL + G++ +    +  M    CSPD+VTY+ +++GL +   +    +L 
Sbjct: 368 NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + +K   E  PD   Y+ VI+  C+ GK+++A G+Y+ M 
Sbjct: 428 ELIKSSRE-GPDAAAYSMVITSLCRAGKLEEACGMYHGME 466


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 193/358 (53%), Gaps = 3/358 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++  LC++G  +    + + MRS    +PN+      +    +A   +AA+ L  Q
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +    N+L++ + K    + AV  F E      + +  T+  LI+    +  
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++KA E F +M   GCSPD + Y TLISGL +  ++ R   +L ++K ++ FSPD+V++ 
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK-EAGFSPDIVSFN 560

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G+C+  K+D+A  +  EM + GIKP  VT+N LI  F K G+  +A  + ++M+  
Sbjct: 561 VLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE 620

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLND 455
           G +P VVT+ +LI  YC NG L++ +K+  +M   + + PN   + ILIN+LC++N+++ 
Sbjct: 621 GLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDL 680

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           A   +  +K   + P    +N +  G  +   + +A  ++  M E  C PD +T  IL
Sbjct: 681 ALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 185/386 (47%), Gaps = 5/386 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PNS  +   +S   R+G+ D A  +L         M     N+LL AL +         +
Sbjct: 268 PNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTL 327

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS-----FGCSPDIVTYNTLI 303
             E   +  QP+  TF ILI  L +   V +A E F  M       F   PD++TYNTLI
Sbjct: 328 LAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLI 387

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GLC+V     G  L++ ++ +    P+ VTY  +I GYCK   ++ A  ++++MN  G+
Sbjct: 388 DGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGV 447

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ VT N L+DG  K G +  A      M   G   + VT+++LI  +C    + + ++
Sbjct: 448 PPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAME 507

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L DEM     SP+   +  LI+ L +  +L+ A   L ++K     P    +N +I+GFC
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFC 567

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           +   +DEA  ++ EME    KPD VT+  LI      G    A  +  KM++ G  P  +
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRAS 569
           T  +LI      G  +EA +I +  S
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMS 653



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 196/392 (50%), Gaps = 14/392 (3%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE-----VTMSTFMYNSLLNALVKQNNAD 243
           PN       ++   +  + D A  +  +   GE     V      YN+L++ L K    +
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQE 397

Query: 244 EAVYMFKEYFRLYSQP----DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           E + + +   R+ SQP    +T T+N LI G  +   ++ A E F  M   G  P++VT 
Sbjct: 398 EGLGLVE---RMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTL 454

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           NTL+ G+C+   +    E   E++ K     + VTYT++I  +C +  ++KA  +++EM 
Sbjct: 455 NTLVDGMCKHGRINGAVEFFNEMQGKG-LKGNAVTYTALIRAFCNVNNIEKAMELFDEML 513

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  P A+ +  LI G  + G +  A ++  +M   G+ PD+V+F+ LI+G+CR  +L+
Sbjct: 514 EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLD 573

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +  ++  EM+   + P+  T+  LI+   K    + A R +K++    LVP    Y  +I
Sbjct: 574 EAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALI 633

Query: 480 DGFCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
             +C  GN+DEA  I  +M    +  P+ V + ILI   C K ++  A+S+ + M   G 
Sbjct: 634 HAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGV 693

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            P+  T N++   L +    ++AF +M R +E
Sbjct: 694 KPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 205/411 (49%), Gaps = 8/411 (1%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++  LC  G  D    V   +   G +  +      +++  RA +      LL++ +  +
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD 335

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFK-----EYFRLYSQPDTWTFNILIQGLSRIGE 276
           +  +   +  L+N L K    DEA+ +F+     E      +PD  T+N LI GL ++G 
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395

Query: 277 VKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            ++       M S   C P+ VTYN LI G C+ + +    EL  ++  K    P+VVT 
Sbjct: 396 QEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN-KDGVPPNVVTL 454

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ G CK G+++ A   +NEM   G+K +AVT+  LI  F  V N+  A  + + ML 
Sbjct: 455 NTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD + + +LI G  + G+L++   +  +MK    SP++ +F +LIN  C++N+L++
Sbjct: 515 AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDE 574

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   LK+++   + P    YN +I  F K G+   A+ ++ +M ++   P  VT+  LI 
Sbjct: 575 AYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIH 634

Query: 516 GHCMKGRMVEAISIFNKMLRIG-CAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +C+ G + EA+ IF  M       P+ +  N LI+ L +    + A  +M
Sbjct: 635 AYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLM 685



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 208/424 (49%), Gaps = 16/424 (3%)

Query: 144 EFSRVN--------LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHLPNSP 192
           EF R+N        + +  +  T+ +++  LC+    D    VF+ M    S+G L    
Sbjct: 320 EFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPD 379

Query: 193 MIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTM-STFMYNSLLNALVKQNNADEAVYMF 249
           +I +   +    + G+ +   GL+ + R     M +T  YN L++   K +  + A  +F
Sbjct: 380 VITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELF 439

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            +  +    P+  T N L+ G+ + G +  A EFF +M   G   + VTY  LI   C V
Sbjct: 440 DQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNV 499

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
           N + +  EL  E+  ++  SPD + Y ++ISG  + GK+D+A+ + ++M   G  P  V+
Sbjct: 500 NNIEKAMELFDEM-LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVS 558

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           FNVLI+GF +   +  A  M + M + G  PD VT+++LI  + + G  +   +L  +M 
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV 618

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP-KPFMYNPVIDGFCKAGNV 488
            + L P V T+  LI+A C    L++A +  + +     VP    +YN +I+  C+   V
Sbjct: 619 KEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQV 678

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           D A  ++ +M+ K  KP+  TF  +  G   K  + +A  + ++M    C PD IT+  L
Sbjct: 679 DLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738

Query: 549 ISCL 552
              L
Sbjct: 739 TEWL 742



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 15/359 (4%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIGEVKKAFE- 282
           T + N L++ L ++   D+A+++  E  +  ++  P++ T +I+   LS+  +V +A + 
Sbjct: 192 THIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDE 251

Query: 283 -----FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                           P+ +    LIS LCR     R  ++L  +  K     +  +  +
Sbjct: 252 EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGL-MKLGGVMEAASCNA 310

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM---L 394
           +++   +  +  +   +  EM    I+P+ VTF +LI+   K   +  A  + E+M    
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370

Query: 395 SFGYL--PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCKEN 451
           S G+L  PDV+T+++LIDG C+ G+  +GL L + M+ +    PN  T+  LI+  CK +
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            +  AR    Q+  + + P     N ++DG CK G ++ A     EM+ K  K + VT+T
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            LI   C    + +A+ +F++ML  GC+PD I   +LIS L + G  + A  ++ +  E
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE 549



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 1/158 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGKCDAAKGLLSQ 216
           TYN ++    + G   +   +   M  +G +P        + + C+     +A K     
Sbjct: 593 TYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               +V  +T +YN L+N+L ++N  D A+ +  +      +P+T TFN + +GL     
Sbjct: 653 SSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNW 712

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           + KAFE    M    C+PD +T   L   L  V E A+
Sbjct: 713 LSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAK 750



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 1/127 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-NSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++ + C  G  D    +F  M S   +P N+ +    ++S  R  + D A  L+  
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDD 687

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   V  +T  +N++   L ++N   +A  +          PD  T  IL + LS +GE
Sbjct: 688 MKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747

Query: 277 VKKAFEF 283
             K   F
Sbjct: 748 TAKLKSF 754


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 204/406 (50%), Gaps = 1/406 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+M   D    V D MRS    P++      + S    GK D A  +L+Q  
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   Y  L+ A + +   DEA+ +  E      +PD +T+N +I+G+ + G V 
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AFE   ++   G  PD+++YN L+  L    +   G +L+ ++ F  +  P+VVTY+ +
Sbjct: 281 RAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM-FSEKCDPNVVTYSIL 339

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+  C+ GK+++A  +   M   G+ P A +++ LI  F + G +  A    E M+S G 
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LPD+V +++++   C+NG+ +Q L++  ++     SPN  ++  + +AL        A  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            + ++  N + P    YN +I   C+ G VDEA  ++ +M      P  VT+ I+++G C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              R+ +AI++   M+  GC P++ T   LI  +   G   EA  +
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 173/339 (51%), Gaps = 1/339 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F YN+L+N   K N  D+A  +          PDT T+NI+I  L   G++  A +    
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + S  C P ++TY  LI        V    +L+ E+       PD+ TY ++I G CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNTIIRGMCKEG 277

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +D+A  +   +   G +P  +++N+L+      G     E +  +M S    P+VVT+S
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LI   CR+G++ + + L   MK K L+P+ Y++  LI A C+E RL+ A  FL+ +  +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             +P    YN V+   CK G  D+A  I  ++ E  C P+  ++  +       G  + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + +  +M+  G  PD+IT NS+ISCL + GM +EAF ++
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 1/225 (0%)

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C+ G   ++  +   M   G  P  +    LI GF  + N+  A  + E +  FG  PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
             +++LI+G+C+  +++   ++ D M+ K+ SP+  T+ I+I +LC   +L+ A + L Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           L  ++  P    Y  +I+     G VDEA  ++ EM  +  KPD  T+  +I G C +G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  A  +   +   G  PD I+ N L+  LL  G   E  ++M +
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTK 323



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 1/124 (0%)

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+     ++   L+ +      P   +   +I GF    N+ +A V V E+ EK  +PD 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA-VRVMEILEKFGQPDV 158

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +  LI G C   R+ +A  + ++M     +PD +T N +I  L   G  + A +++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 568 ASED 571
              D
Sbjct: 219 LLSD 222


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++    +    ++   V D M+S G LP+       + S    GK D A  +  +  
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   Y  L+ A +     D A+ +  E      +PDT T+N +I+G+ +   V 
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KAFE    + S GC PDI+TYN L+  L    + + G +L+ E+       P+VVT++ +
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM-ISIGCKPNVVTHSIL 319

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I   C+ GK+++A  +   M   G+KP A  ++ LI GF + G +  A    E M+S G 
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LPD+V +++++ G CR G+ +Q L++ +++      PNV ++  L +AL        A  
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            + +L    + P    YN +I   C+ G VDEA  ++ +M+  R +P+ V++ I+++G C
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI------MQRASEDQ 572
              R  +AI +   M   GC P++ T   LI  +   G+  EA  +      M   SED 
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDS 559



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 206/426 (48%), Gaps = 12/426 (2%)

Query: 146 SRVNLSLNHSFKTYNL--VMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVS 199
           +R    L+  FK  +L  ++   C  G ++      + M   G+ P+    + +I+ F +
Sbjct: 57  TRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFN 116

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           S    GK      +L ++   +V    F YN+L++  +K N  + A  +          P
Sbjct: 117 S-RNIGKATRVMEILERYGKPDV----FAYNALISGFIKANQLENANRVLDRMKSRGFLP 171

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  T+NI+I      G++  A E F ++    C P ++TY  LI        +    +LL
Sbjct: 172 DVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLL 231

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+  K    PD +TY ++I G CK   +DKA  +   ++S G KP  +T+N+L+     
Sbjct: 232 DEMLSKG-LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLS 290

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G     E +   M+S G  P+VVT S LI   CR+G++ + + L   MK K L P+ Y 
Sbjct: 291 RGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYC 350

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  LI   C+E RL+ A  FL+ +  +  +P    YN ++ G C+ G  D+A  +  +++
Sbjct: 351 YDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLD 410

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E  C P+  ++  L       G    A+ +  K+L  G  PD+IT NSLISCL + GM +
Sbjct: 411 EVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVD 470

Query: 560 EAFRIM 565
           EA  ++
Sbjct: 471 EAIELL 476



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 143/299 (47%), Gaps = 2/299 (0%)

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R G+  ++  F   M   G +PD++    LI G      + +   +++ ++   +  PDV
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGK--PDV 138

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             Y ++ISG+ K  +++ A  + + M S G  P  VT+N++I  F   G +  A  + E 
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           +L     P V+T++ LI+    +G ++  +KL DEM  K L P+  T+  +I  +CKE  
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++ A   L+ L      P    YN ++      G   E   +++EM    CKP+ VT +I
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           LI   C  G++ EA+++   M   G  PD    + LI+   + G  + A   ++    D
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISD 377


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 177/331 (53%), Gaps = 2/331 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           T ++N L+   V+      A  +F E  R   QP   TFN LI G+ R  ++      + 
Sbjct: 186 TRLFNVLMRDFVRLGELVSARKVFDE-MRRSVQPTVVTFNTLISGMCRARDLDAVDGLYK 244

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +M   G  PD+ TY  LI G CR   +    ++  E++  +  +P+ V +T++I  +CK 
Sbjct: 245 EMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMR-DTGVNPNAVVFTTLIDAHCKE 303

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G ++    +Y +M   G+ P  V +N L++G  +  N+ +AE + E M + G  PD VT+
Sbjct: 304 GNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTY 363

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           ++LIDG C++G+L+  + +  +M  K +S +  T+T LI+ L K  R  DA R L+++  
Sbjct: 364 TTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMME 423

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L P    Y  VID FC+ G+V     ++ EM+ K  KP  VT+ +++ G C  G+M  
Sbjct: 424 AALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKN 483

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           A  + + ML IG +PDDIT N L+    K G
Sbjct: 484 ADMLLHAMLNIGVSPDDITYNILLDGQCKHG 514



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 168/359 (46%), Gaps = 7/359 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + +N++MR    +G   S + VFD MR     P        +S   RA   DA  GL  +
Sbjct: 187 RLFNVLMRDFVRLGELVSARKVFDEMRRSVQ-PTVVTFNTLISGMCRARDLDAVDGLYKE 245

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V    + Y +L+    +    + AV MF E       P+   F  LI    + G 
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN 305

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V    + + DM   G  PD+V YN L++GLCR   +     +++E+K  +   PD VTYT
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK-NAGLKPDKVTYT 364

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G CK GK+D A  I  +M    +    VT+  LI G  K G  V AE +   M+  
Sbjct: 365 TLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA 424

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD  T++ +ID +CR G +  G KL  EM+ K   P V T+ +++N LCK  ++ +A
Sbjct: 425 ALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNA 484

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILI 514
              L  +    + P    YN ++DG CK G V  +     E+E  K   PD   +T LI
Sbjct: 485 DMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSE----ELESSKGMVPDFAVYTSLI 539



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 2/296 (0%)

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           +SR+    +A+ F+  +   G +P+   +N L+    R+ E+    ++  E++      P
Sbjct: 161 MSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR--RSVQP 218

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            VVT+ ++ISG C+   +D   G+Y EM+  G+KP   T+  LI GF + G M +A  M 
Sbjct: 219 TVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMF 278

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             M   G  P+ V F++LID +C+ G +N G+ L  +M+ + + P++  +  L+N LC+ 
Sbjct: 279 NEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRA 338

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             L  A   ++++K   L P    Y  +IDG CK G +D A  I  +M EK    D+VT+
Sbjct: 339 RNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTY 398

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           T LI G    GR V+A  +  +M+     PD+ T   +I    + G     F++++
Sbjct: 399 TALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLK 454



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 188/369 (50%), Gaps = 5/369 (1%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  P + +    +   +R G+  +A+ +  + R   V  +   +N+L++ + +  + D  
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAV 239

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             ++KE   +  +PD +T+  LI+G  R G ++ A + F +M   G +P+ V + TLI  
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
            C+   V  G +L ++++ +    PD+V Y ++++G C+   +  A  I  EM + G+KP
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRG-VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKP 358

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             VT+  LIDG  K G +  A  ++++M       D VT+++LI G  + G+     ++ 
Sbjct: 359 DKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVL 418

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            EM    L P+  T+T++I+A C++  +    + LK+++     P    YN +++G CK 
Sbjct: 419 REMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKL 478

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +  A++++  M      PD +T+ IL+ G C  G++  +  + +     G  PD    
Sbjct: 479 GQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSK---GMVPDFAVY 535

Query: 546 NSLISCLLK 554
            SLIS L K
Sbjct: 536 TSLISELAK 544



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 138/243 (56%), Gaps = 1/243 (0%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +P+   +  ++  + +LG++  A  +++EM    ++P+ VTFN LI G  +  ++ + +
Sbjct: 182 MAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMCRARDLDAVD 240

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M   G  PDV T+ +LI G+CR G++   +K+ +EM+   ++PN   FT LI+A 
Sbjct: 241 GLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAH 300

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CKE  +N      + ++   ++P    YN +++G C+A N+  A  IV EM+    KPDK
Sbjct: 301 CKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDK 360

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+T LI G C  G++  A+ I  KM     + D++T  +LIS L K G P +A R+++ 
Sbjct: 361 VTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLRE 420

Query: 568 ASE 570
             E
Sbjct: 421 MME 423



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 163/340 (47%), Gaps = 4/340 (1%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           F  +  S+  +  T+N ++  +C     D+V  ++  M   G  P+       +    R 
Sbjct: 209 FDEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRT 268

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G+ + A  + ++ R   V  +  ++ +L++A  K+ N +  + ++++       PD   +
Sbjct: 269 GRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAY 328

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           N L+ GL R   +K A     +M + G  PD VTY TLI G C+  ++    + +K+   
Sbjct: 329 NALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMD-IKQKMA 387

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           + E S D VTYT++ISG  K G+   A  +  EM    ++P   T+ ++ID F + G++ 
Sbjct: 388 EKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVK 447

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
           +   + + M + G  P VVT++ +++G C+ GQ+     L   M    +SP+  T+ IL+
Sbjct: 448 TGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILL 507

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
           +  CK  ++ ++           +VP   +Y  +I    K
Sbjct: 508 DGQCKHGKVANSEELESS---KGMVPDFAVYTSLISELAK 544



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 13/165 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L + G     + V   M      P++      + +  R G       LL + 
Sbjct: 397 TYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEM 456

Query: 218 -----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
                +PG VT     YN ++N L K      A  +      +   PD  T+NIL+ G  
Sbjct: 457 QNKGKKPGVVT-----YNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQC 511

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           + G+V  + E      S G  PD   Y +LIS L +       H+
Sbjct: 512 KHGKVANSEEL---ESSKGMVPDFAVYTSLISELAKKKPAKNYHD 553


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 222/466 (47%), Gaps = 17/466 (3%)

Query: 121 LSPLNSLEVIKRL-DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL-CEMGLHDSVQV- 177
           L+P+    V+  L ++PKL  KF ++S       HS ++Y +V   L C    +D+  V 
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165

Query: 178 -----------VFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
                      VFD + S  ++  P   + +   S  I  G  + A    S+ +   V  
Sbjct: 166 KEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFP 225

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
            T   N LL+   K    D+    FK+     ++P  +T+NI+I  + + G+V+ A   F
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 285

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G  PD VTYN++I G  +V  +       +E+K      PDV+TY ++I+ +CK
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK-DMCCEPDVITYNALINCFCK 344

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK+      Y EM   G+KP+ V+++ L+D F K G M  A      M   G +P+  T
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++SLID  C+ G L+   +L +EM    +  NV T+T LI+ LC   R+ +A     ++ 
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              ++P    YN +I GF KA N+D A  ++ E++ +  KPD + +   I G C   ++ 
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            A  + N+M   G   + +   +L+    K G P E   ++    E
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 200/421 (47%), Gaps = 1/421 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            F  ++ +   L ++G+ +     F  M+     P +      +    + GK D  K   
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                     + F YN +++ + K+ + + A  +F+E       PDT T+N +I G  ++
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +     FF +M    C PD++TYN LI+  C+  ++  G E  +E+K  +   P+VV+
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK-GNGLKPNVVS 369

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y++++  +CK G M +A   Y +M   G+ P+  T+  LID   K+GN+  A  +   ML
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   +VVT+++LIDG C   ++ +  +L  +M    + PN+ ++  LI+   K   ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L +LK   + P   +Y   I G C    ++ A V++ EM+E   K + + +T L+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
             +   G   E + + ++M  +      +T   LI  L K  + ++A     R S D  L
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609

Query: 575 Q 575
           Q
Sbjct: 610 Q 610



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 201/428 (46%), Gaps = 8/428 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G        +  M+ +G  PN       V +  + G    A       
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + + Y SL++A  K  N  +A  +  E  ++  + +  T+  LI GL     +
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E F  M + G  P++ +YN LI G  +   + R  ELL E+K +    PD++ Y +
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGT 512

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I G C L K++ A  + NEM  CGIK +++ +  L+D + K GN     ++ + M    
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCKENRLNDA 456
               VVTF  LIDG C+N  +++ +   + +     L  N   FT +I+ LCK+N++  A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +Q+    LVP    Y  ++DG  K GNV EA  +  +M E   K D + +T L+ G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM------QRASE 570
                ++ +A S   +M+  G  PD++   S++    + G  +EA  +       Q  + 
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS 752

Query: 571 DQNLQLPS 578
           D +  LP+
Sbjct: 753 DNDNALPN 760


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 183/352 (51%), Gaps = 3/352 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+LL+ L  ++   EA+ +F + F    +P+  TF  L+ GL R G + +A      M 
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P  +TY T++ G+C+  +      LL++++  S   P+VV Y+++I   CK G+ 
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  ++ EM   GI P   T+N +I GF   G    AE + + ML     PDVVT+++L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ + + G+  +  +L DEM  + + PN  T++ +I+  CK+NRL+ A      +     
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    +N +IDG+C A  +D+   ++ EM E     D  T+  LI G  + G +  A+ 
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           +  +M+  G  PD +T ++L+  L   G   +A   F++MQ++ +D +   P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C+ G   S   +   M    H+ PN  +    + S  + G+   A+ L ++
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +    F YNS++          +A  + +E       PD  T+N LI    + G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TY+++I G C+ N +     +   +  K   SP+++T+ 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFN 399

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D    + +EM   G+     T+N LI GF  VG++ +A  + + M+S 
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-----------NLSPNVYTFTILIN 445
           G  PD+VT  +L+DG C NG+L   L++   M+              + P+V T+ ILI+
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +IDG CK   +DEA  +   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTFT LI G+C  GR+ + + +F +M R G   + IT  +LI    K G  N A  I 
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639

Query: 566 QR 567
           Q 
Sbjct: 640 QE 641



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 207/409 (50%), Gaps = 20/409 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGLL 214
           Y+ ++ SLC+ G H   Q +F  M+  G  P+    + MI  F SS    G+   A+ LL
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS----GRWSDAEQLL 313

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    +++     YN+L+NA VK+    EA  ++ E       P+T T++ +I G  + 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +  A   FY M + GCSP+++T+NTLI G C    +  G ELL E+  ++    D  T
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTT 432

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+  +G ++ A  +  EM S G+ P  VT + L+DG    G +  A  M + M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 395 SF-----------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                        G  PDV T++ LI G    G+  +  +L +EM  + + P+  T++ +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK++RL++A +    +      P    +  +I+G+CKAG VD+   +  EM  +  
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             + +T+  LI G    G +  A+ IF +M+  G  PD IT+ ++++ L
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 173/386 (44%), Gaps = 45/386 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +  + G     + ++D M   G +PN+      +    +  + DAA+ +    
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +   +N+L++        D+ + +  E        DT T+N LI G   +G++
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEF-------- 328
             A +   +M S G  PDIVT +TL+ GLC   ++    E+ K + K K +         
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 329 -SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TY  +ISG    GK  +A  +Y EM   GI P  +T++ +IDG  K   +  A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M + M S  + P+VVTF++LI+GYC+ G+++ GL+L  EM  + +  N  T+  LI   
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI--- 623

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C                                GF K GN++ A  I  EM      PD 
Sbjct: 624 C--------------------------------GFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
           +T   ++ G   K  +  A+++  K+
Sbjct: 652 ITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 2/270 (0%)

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L SG   +  +    +L  ++  +S   P VV +  ++    ++ + D    +Y +M   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDM-LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            I+    +F +LI  F     +  A     ++   G  PDVVTF++L+ G C   ++++ 
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L L  +M      PNV TFT L+N LC+E R+ +A   L ++  + L P    Y  ++DG
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 482 FCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            CK G+   A  ++ +MEE     P+ V ++ +I   C  GR  +A ++F +M   G  P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D  T NS+I      G  ++A +++Q   E
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 39/249 (15%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           DT    LC+     ++LE+ K +   K   K L+ S     +    +TYN+++  L   G
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK---KDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                + +++ M   G +P+                                   T  Y+
Sbjct: 526 KFLEAEELYEEMPHRGIVPD-----------------------------------TITYS 550

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           S+++ L KQ+  DEA  MF         P+  TF  LI G  + G V    E F +MG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   + +TY TLI G  +V  +    ++ +E+   S   PD +T  ++++G     ++ +
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEM-ISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 351 ATGIYNEMN 359
           A  +  ++ 
Sbjct: 670 AVAMLEKLQ 678



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 35/199 (17%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L  GF ++  +  A  +   ML    LP VV F  L+    R  + +  + L  +M+ K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  ++Y+FTILI   C  ++L                  PF  +         G + +  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKL------------------PFALSTF-------GKITKLG 144

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +           PD VTF  L+ G C++ R+ EA+++F++M    C P+ +T  +L++ L
Sbjct: 145 L----------HPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194

Query: 553 LKGGMPNEAFRIMQRASED 571
            + G   EA  ++ R  ED
Sbjct: 195 CREGRIVEAVALLDRMMED 213


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C+ G   S   +   M    H+ PN  +    + S  + G+   A+ L ++
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +    F YNS++          +A  + +E       PD  T+N LI    + G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TY+++I G C+ N +     +   +  K   SP+++T+ 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFN 399

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D    + +EM   G+     T+N LI GF  VG++ +A  + + M+S 
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-----------NLSPNVYTFTILIN 445
           G  PD+VT  +L+DG C NG+L   L++   M+              + P+V T+ ILI+
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +IDG CK   +DEA  +   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTFT LI G+C  GR+ + + +F +M R G   + IT  +LI    K G  N A  I 
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639

Query: 566 QR 567
           Q 
Sbjct: 640 QE 641



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 207/409 (50%), Gaps = 20/409 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGLL 214
           Y+ ++ SLC+ G H   Q +F  M+  G  P+    + MI  F SS    G+   A+ LL
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS----GRWSDAEQLL 313

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    +++     YN+L+NA VK+    EA  ++ E       P+T T++ +I G  + 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +  A   FY M + GCSP+++T+NTLI G C    +  G ELL E+  ++    D  T
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTT 432

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+  +G ++ A  +  EM S G+ P  VT + L+DG    G +  A  M + M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 395 SF-----------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                        G  PDV T++ LI G    G+  +  +L +EM  + + P+  T++ +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK++RL++A +    +      P    +  +I+G+CKAG VD+   +  EM  +  
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             + +T+  LI G    G +  A+ IF +M+  G  PD IT+ ++++ L
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 181/352 (51%), Gaps = 3/352 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           + +LL+ L  ++   EA+  F + F    +P+  TF  L+ GL R G + +A      M 
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P  +TY T++ G+C+  +      LL++++  S   P+VV Y+++I   CK G+ 
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  ++ EM   GI P   T+N +I GF   G    AE + + ML     PDVVT+++L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ + + G+  +  +L DEM  + + PN  T++ +I+  CK+NRL+ A      +     
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    +N +IDG+C A  +D+   ++ EM E     D  T+  LI G  + G +  A+ 
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           +  +M+  G  PD +T ++L+  L   G   +A   F++MQ++ +D +   P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 173/386 (44%), Gaps = 45/386 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +  + G     + ++D M   G +PN+      +    +  + DAA+ +    
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +   +N+L++        D+ + +  E        DT T+N LI G   +G++
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEF-------- 328
             A +   +M S G  PDIVT +TL+ GLC   ++    E+ K + K K +         
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 329 -SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TY  +ISG    GK  +A  +Y EM   GI P  +T++ +IDG  K   +  A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M + M S  + P+VVTF++LI+GYC+ G+++ GL+L  EM  + +  N  T+  LI   
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI--- 623

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C                                GF K GN++ A  I  EM      PD 
Sbjct: 624 C--------------------------------GFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
           +T   ++ G   K  +  A+++  K+
Sbjct: 652 ITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 2/270 (0%)

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L SG   +  +    +L  ++  +S   P VV +  ++    ++ + D    +Y +M   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDM-LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            I+    +FN+LI  F     +  A     ++   G  PDVVTF++L+ G C   ++++ 
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L    +M      PNV TFT L+N LC+E R+ +A   L ++  + L P    Y  ++DG
Sbjct: 169 LDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 482 FCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            CK G+   A  ++ +MEE     P+ V ++ +I   C  GR  +A ++F +M   G  P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D  T NS+I      G  ++A +++Q   E
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 39/249 (15%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           DT    LC+     ++LE+ K +   K   K L+ S     +    +TYN+++  L   G
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK---KDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                + +++ M   G +P+                                   T  Y+
Sbjct: 526 KFLEAEELYEEMPHRGIVPD-----------------------------------TITYS 550

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           S+++ L KQ+  DEA  MF         P+  TF  LI G  + G V    E F +MG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   + +TY TLI G  +V  +    ++ +E+   S   PD +T  ++++G     ++ +
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEM-ISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 351 ATGIYNEMN 359
           A  +  ++ 
Sbjct: 670 AVAMLEKLQ 678



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 35/199 (17%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L  GF ++  +  A  +   ML    LP VV F  L+    R  + +  + L  +M+ K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  ++Y+F ILI   C  ++L                  PF  +         G + +  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKL------------------PFALSTF-------GKITKLG 144

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +           PD VTFT L+ G C++ R+ EA+  F++M    C P+ +T  +L++ L
Sbjct: 145 L----------HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGL 194

Query: 553 LKGGMPNEAFRIMQRASED 571
            + G   EA  ++ R  ED
Sbjct: 195 CREGRIVEAVALLDRMMED 213


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 201/411 (48%), Gaps = 1/411 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F+    V +++  S  T+N+++  LC  G     +    +M   G  PN       ++  
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              GK +AA  +    +   +    + YNS ++ L K+   +EA  +  +       P+ 
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+N LI G    G++ KAF +  +M + G    + TYN LI  L     +    +++KE
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ K    PDVVTY   I+GYC+ G   KA  +++EM    I+P+  T+  LID FGK  
Sbjct: 383 MREKG-VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRN 441

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            M  AE   ++ +  G LPD++ F++LIDG+C NG +++  +L  EM    + P+  TF 
Sbjct: 442 RMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFN 501

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+   C+E ++ +A++ L ++K   + P    YN +I G+ K G++ +A  +  EM   
Sbjct: 502 TLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSL 561

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              P  +T+  LI G+   G    A  +  +M   G  PDD T   +I  +
Sbjct: 562 GFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 188/355 (52%), Gaps = 36/355 (10%)

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A ++++E  ++  +    TFNI+I  L R G+ KKA +F   M  +G  P++VTYNT+I+
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           G C   +     ++ K +K K+   PD  TY S IS  CK  ++++A+G+  ++   G+ 
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKN-LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL------------------------- 399
           P+AVT+N LIDG    G++  A   R+ M++ G +                         
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379

Query: 400 ----------PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
                     PDVVT++  I+GYCR G   + L L DEM  KN+ P V T+T LI+   K
Sbjct: 380 IKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGK 439

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            NR+++A    K+     ++P   M+N +IDG C  GN+D A  ++ EM+  +  PD+VT
Sbjct: 440 RNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVT 499

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           F  L+ G+C + ++ EA  + ++M   G  PD I+ N+LIS   K G   +A  +
Sbjct: 500 FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 223/477 (46%), Gaps = 39/477 (8%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L+ I     P +    L  +R  L++  +   ++L++ + C+    D      + M+ + 
Sbjct: 119 LQPILHTTTPTVIFNELSLARNRLNVKTTL-VFDLLLSAYCQFRKPDEALECLNLMKENE 177

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
            +P +      +S  ++  K   A  +  +     +  S   +N ++N L ++    +A 
Sbjct: 178 IIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKA- 236

Query: 247 YMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             F  +  +Y  +P+  T+N +I G    G+ + A + F  M      PD  TYN+ IS 
Sbjct: 237 KDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISR 296

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA---------TGI-- 354
           LC+   +     +L ++  +S   P+ VTY ++I G C  G +DKA          GI  
Sbjct: 297 LCKERRIEEASGVLCKL-LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVA 355

Query: 355 ----YN--------------------EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
               YN                    EM   G++P  VT+N+ I+G+ + GN   A  + 
Sbjct: 356 SVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLF 415

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + M+     P V T++SLID + +  ++++  +   +   + + P++  F  LI+  C  
Sbjct: 416 DEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVN 475

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             ++ A + LK++    +VP    +N ++ G+C+   V+EA  ++ EM+E+  KPD +++
Sbjct: 476 GNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISY 535

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             LI G+  +G M +A+ +F++ML +G  P  +T N+LI    K G  + A  +++ 
Sbjct: 536 NTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLRE 592



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++ +L      +  + +   MR  G  P+       ++   R G    A  L  + 
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y SL++   K+N   EA   FK+  +    PD   FN LI G    G +
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+   +M +    PD VT+NTL+ G CR  +V    +LL E+K +    PD ++Y +
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG-IKPDHISYNT 537

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGY K G M  A  +++EM S G  P+ +T+N LI G+ K+G    AE +   M S G
Sbjct: 538 LISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG 597

Query: 398 YLPDVVTFSSLIDGYCRNGQL 418
             PD  T+  +I+    N  L
Sbjct: 598 ITPDDSTYLYVIEAMKTNDDL 618


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 183/352 (51%), Gaps = 3/352 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+LL+ L  ++   EA+ +F + F    +P+  TF  L+ GL R G + +A      M 
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P  +TY T++ G+C+  +      LL++++  S   P+VV Y+++I   CK G+ 
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  ++ EM   GI P   T+N +I GF   G    AE + + ML     PDVVT+++L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ + + G+  +  +L DEM  + + PN  T++ +I+  CK+NRL+ A      +     
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    +N +IDG+C A  +D+   ++ EM E     D  T+  LI G  + G +  A+ 
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           +  +M+  G  PD +T ++L+  L   G   +A   F++MQ++ +D +   P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C+ G   S   +   M    H+ PN  +    + S  + G+   A+ L ++
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +    F YNS++          +A  + +E       PD  T+N LI    + G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TY+++I G C+ N +     +   +  K   SP+++T+ 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFN 399

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D    + +EM   G+     T+N LI GF  VG++ +A  + + M+S 
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-----------NLSPNVYTFTILIN 445
           G  PD+VT  +L+DG C NG+L   L++   M+              + P+V T+ ILI+
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +IDG CK   +DEA  +   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTFT LI G+C  GR+ + + +F +M R G   + IT  +LI    K G  N A  I 
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639

Query: 566 QR 567
           Q 
Sbjct: 640 QE 641



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 207/409 (50%), Gaps = 20/409 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGLL 214
           Y+ ++ SLC+ G H   Q +F  M+  G  P+    + MI  F SS    G+   A+ LL
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS----GRWSDAEQLL 313

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    +++     YN+L+NA VK+    EA  ++ E       P+T T++ +I G  + 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +  A   FY M + GCSP+++T+NTLI G C    +  G ELL E+  ++    D  T
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTT 432

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+  +G ++ A  +  EM S G+ P  VT + L+DG    G +  A  M + M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 395 SF-----------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                        G  PDV T++ LI G    G+  +  +L +EM  + + P+  T++ +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK++RL++A +    +      P    +  +I+G+CKAG VD+   +  EM  +  
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             + +T+  LI G    G +  A+ IF +M+  G  PD IT+ ++++ L
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 173/386 (44%), Gaps = 45/386 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +  + G     + ++D M   G +PN+      +    +  + DAA+ +    
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +   +N+L++        D+ + +  E        DT T+N LI G   +G++
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEF-------- 328
             A +   +M S G  PDIVT +TL+ GLC   ++    E+ K + K K +         
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 329 -SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TY  +ISG    GK  +A  +Y EM   GI P  +T++ +IDG  K   +  A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M + M S  + P+VVTF++LI+GYC+ G+++ GL+L  EM  + +  N  T+  LI   
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI--- 623

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C                                GF K GN++ A  I  EM      PD 
Sbjct: 624 C--------------------------------GFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
           +T   ++ G   K  +  A+++  K+
Sbjct: 652 ITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 2/270 (0%)

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L SG   +  +    +L  ++  +S   P VV +  ++    ++ + D    +Y +M   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDM-LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            I+    +F +LI  F     +  A     ++   G  PDVVTF++L+ G C   ++++ 
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L L  +M      PNV TFT L+N LC+E R+ +A   L ++  + L P    Y  ++DG
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 482 FCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            CK G+   A  ++ +MEE     P+ V ++ +I   C  GR  +A ++F +M   G  P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D  T NS+I      G  ++A +++Q   E
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 39/249 (15%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           DT    LC+     ++LE+ K +   K   K L+ S     +    +TYN+++  L   G
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK---KDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                + +++ M   G +P+                                   T  Y+
Sbjct: 526 KFLEAEELYEEMPHRGIVPD-----------------------------------TITYS 550

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           S+++ L KQ+  DEA  MF         P+  TF  LI G  + G V    E F +MG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   + +TY TLI G  +V  +    ++ +E+   S   PD +T  ++++G     ++ +
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEM-ISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 351 ATGIYNEMN 359
           A  +  ++ 
Sbjct: 670 AVAMLEKLQ 678



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 35/199 (17%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L  GF ++  +  A  +   ML    LP VV F  L+    R  + +  + L  +M+ K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  ++Y+FTILI   C  ++L                  PF                 A 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKL------------------PF-----------------AL 134

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               ++ +    PD VTF  L+ G C++ R+ EA+++F++M    C P+ +T  +L++ L
Sbjct: 135 STFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194

Query: 553 LKGGMPNEAFRIMQRASED 571
            + G   EA  ++ R  ED
Sbjct: 195 CREGRIVEAVALLDRMMED 213


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 13/422 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C+ G   S   +   M    H+ PN  +    + S  + G+   A+ L ++
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +    F YNS++          +A  + +E       PD  T+N LI    + G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A E + +M   G  P+ +TY+++I G C+ N +     +   +  K   SP+++T+ 
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG-CSPNLITFN 399

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC   ++D    + +EM   G+     T+N LI GF  VG++ +A  + + M+S 
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISS 459

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-----------NLSPNVYTFTILIN 445
           G  PD+VT  +L+DG C NG+L   L++   M+              + P+V T+ ILI+
Sbjct: 460 GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILIS 519

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +IDG CK   +DEA  +   M  K   P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTFT LI G+C  GR+ + + +F +M R G   + IT  +LI    K G  N A  I 
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639

Query: 566 QR 567
           Q 
Sbjct: 640 QE 641



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 207/409 (50%), Gaps = 20/409 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGLL 214
           Y+ ++ SLC+ G H   Q +F  M+  G  P+    + MI  F SS    G+   A+ LL
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS----GRWSDAEQLL 313

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    +++     YN+L+NA VK+    EA  ++ E       P+T T++ +I G  + 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +  A   FY M + GCSP+++T+NTLI G C    +  G ELL E+  ++    D  T
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTT 432

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+  +G ++ A  +  EM S G+ P  VT + L+DG    G +  A  M + M 
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 395 SF-----------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                        G  PDV T++ LI G    G+  +  +L +EM  + + P+  T++ +
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK++RL++A +    +      P    +  +I+G+CKAG VD+   +  EM  +  
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             + +T+  LI G    G +  A+ IF +M+  G  PD IT+ ++++ L
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 182/352 (51%), Gaps = 3/352 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           + +LL+ L  ++   EA+ +F + F    +P+  TF  L+ GL R G + +A      M 
Sbjct: 152 FTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM 211

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P  +TY T++ G+C+  +      LL++++  S   P+VV Y+++I   CK G+ 
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  ++ EM   GI P   T+N +I GF   G    AE + + ML     PDVVT+++L
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ + + G+  +  +L DEM  + + PN  T++ +I+  CK+NRL+ A      +     
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    +N +IDG+C A  +D+   ++ EM E     D  T+  LI G  + G +  A+ 
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQLP 577
           +  +M+  G  PD +T ++L+  L   G   +A   F++MQ++ +D +   P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 173/386 (44%), Gaps = 45/386 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +  + G     + ++D M   G +PN+      +    +  + DAA+ +    
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +   +N+L++        D+ + +  E        DT T+N LI G   +G++
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEF-------- 328
             A +   +M S G  PDIVT +TL+ GLC   ++    E+ K + K K +         
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 329 -SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TY  +ISG    GK  +A  +Y EM   GI P  +T++ +IDG  K   +  A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M + M S  + P+VVTF++LI+GYC+ G+++ GL+L  EM  + +  N  T+  LI   
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI--- 623

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C                                GF K GN++ A  I  EM      PD 
Sbjct: 624 C--------------------------------GFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
           +T   ++ G   K  +  A+++  K+
Sbjct: 652 ITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 2/270 (0%)

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L SG   +  +    +L  ++  +S   P VV +  ++    ++ + D    +Y +M   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDM-LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            I+    +FN+LI  F     +  A     ++   G  PDVVTF++L+ G C   ++++ 
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L L  +M      PNV TFT L+N LC+E R+ +A   L ++  + L P    Y  ++DG
Sbjct: 169 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228

Query: 482 FCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            CK G+   A  ++ +MEE     P+ V ++ +I   C  GR  +A ++F +M   G  P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D  T NS+I      G  ++A +++Q   E
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 39/249 (15%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           DT    LC+     ++LE+ K +   K   K L+ S     +    +TYN+++  L   G
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSK---KDLDASHPFNGVEPDVQTYNILISGLINEG 525

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                + +++ M   G +P+                                   T  Y+
Sbjct: 526 KFLEAEELYEEMPHRGIVPD-----------------------------------TITYS 550

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           S+++ L KQ+  DEA  MF         P+  TF  LI G  + G V    E F +MG  
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   + +TY TLI G  +V  +    ++ +E+   S   PD +T  ++++G     ++ +
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEM-ISSGVYPDTITIRNMLTGLWSKEELKR 669

Query: 351 ATGIYNEMN 359
           A  +  ++ 
Sbjct: 670 AVAMLEKLQ 678



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 35/199 (17%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L  GF ++  +  A  +   ML    LP VV F  L+    R  + +  + L  +M+ K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  ++Y+F ILI   C  ++L                  PF  +         G + +  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKL------------------PFALSTF-------GKITKLG 144

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +           PD VTFT L+ G C++ R+ EA+++F++M    C P+ +T  +L++ L
Sbjct: 145 L----------HPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGL 194

Query: 553 LKGGMPNEAFRIMQRASED 571
            + G   EA  ++ R  ED
Sbjct: 195 CREGRIVEAVALLDRMMED 213


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 199/401 (49%), Gaps = 4/401 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            + +V+  LC     D    V +     G  P+      F+    +A + D A  LL + 
Sbjct: 9   AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 68

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +T  Y +L++ L+K    DEA+ + ++     + P   T+ ++I GLS+ G V
Sbjct: 69  DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRV 128

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV---KFKSEFSPDVVT 334
           ++A   F DM   GC PD   Y  LI GLC+  +    + L KE    K  +   PDVVT
Sbjct: 129 EEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT 188

Query: 335 YTSVISGYCKLGKMDKATGIY-NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           YTS+I G CK G++ +A  ++ +E    G  P AVT+  +IDG  K+G +         M
Sbjct: 189 YTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 248

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + GY PD VT+++LIDG+ +   + +  ++  +M       +  T+ I+++ LCK  R+
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A      ++    V     Y+ ++DGFC  GNV  A  +   M ++ C+P+ V++ I+
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           I G C  G++ +A   F K+L+    PD  T N+ +  L +
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ 409



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 204/421 (48%), Gaps = 10/421 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L + G  D    V + M   G+ P        +    +AG+ + A+ +    
Sbjct: 79  TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 138

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY----FRLYSQPDTWTFNILIQGLSR 273
                    F+Y +L+  L K    +EA  ++KE         + PD  T+  LI GL +
Sbjct: 139 LGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCK 198

Query: 274 IGEVKKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            G + +A + F D     G  PD VTY ++I GLC++  V  G E   E++ +  + PD 
Sbjct: 199 AGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG-YEPDA 257

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY ++I G+ K   + KA  +Y +M   G   S VT+N+++DG  K G +  A      
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G +  VVT+S+L+DG+C  G ++  ++L   M  +   PN+ ++ I+I  LC+  +
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFC-KAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           L  A  + ++L    L P  + +N  + G C +   V +   +   M  +   P+  +++
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYS 437

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRA 568
           IL+ G C  G +  A+ IF +M+  G APD +  N+LI  L   G  +EA   FR ++R 
Sbjct: 438 ILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 497

Query: 569 S 569
           S
Sbjct: 498 S 498



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 158/310 (50%), Gaps = 8/310 (2%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD   F ++I GL R   + +AF         GC PD VTYN  I GLC+   V    +L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           LK++  K    P  VTYT+++ G  K G++D+A  +  +M   G  P+  T+ V+IDG  
Sbjct: 65  LKKMDEKKCL-PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK----NLS 434
           K G +  A  +   ML  G  PD   +++LI G C++G+  +   L  E   +       
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 435 PNVYTFTILINALCKENRLNDARR-FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           P+V T+T LI+ LCK  R+ +AR+ F  +      +P    Y  +IDG CK G V+E   
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMV-EAISIFNKMLRIGCAPDDITVNSLISCL 552
              EM  +  +PD VT+  LI G  MK +M+ +A  ++ +ML+ G     +T N ++  L
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGF-MKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 553 LKGGMPNEAF 562
            K G   EA+
Sbjct: 303 CKAGRVAEAY 312



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 181/383 (47%), Gaps = 45/383 (11%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +  ++N L ++   DEA  + +   R   +PD  T+N+ I GL +   V  AF+    M 
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
              C P  VTY  L+ GL +   +     +L+++  K   SP + TYT VI G  K G++
Sbjct: 70  EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN-SPTLKTYTVVIDGLSKAGRV 128

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE----RMLSFGYLPDVVT 404
           ++A  I+ +M   G +P A  +  LI G  K G    A  + +    R      +PDVVT
Sbjct: 129 EEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT 188

Query: 405 FSSLIDGYCRNGQLNQGLKLCD-EMKGKNLSPNVYTFTILINALCKENRLND-------- 455
           ++SLIDG C+ G++ +  ++ D E   +   P+  T+T +I+ LCK  R+ +        
Sbjct: 189 YTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 248

Query: 456 ---------------------------ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                                      A R  +Q+  +  V     YN ++DG CKAG V
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA      MEE+ C    VT++ L+ G C +G +  A+ +F +ML  GC P+ ++ N +
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368

Query: 549 ISCLLKGGMPNEAF----RIMQR 567
           I  L + G   +A+    +++QR
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQR 391



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 204/437 (46%), Gaps = 45/437 (10%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + KTY +V+  L + G  +  + +F  M  +G  P++ +    +    ++GK + A  L 
Sbjct: 111 TLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALY 170

Query: 215 SQF--RPGEVTM--STFMYNSLLNALVKQNNADEAVYMFK-EYFRLYSQPDTWTFNILIQ 269
            +   R    T       Y SL++ L K     EA  +F  E       PD  T+  +I 
Sbjct: 171 KEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIID 230

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL ++G V++  E F++M + G  PD VTY  LI G  +   + + H + +++  +S   
Sbjct: 231 GLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM-LQSGTV 289

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
              VTY  ++ G CK G++ +A   +  M   G   + VT++ L+DGF   GN+ +A  +
Sbjct: 290 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 349

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQL------------------------------- 418
             RML  G  P++V+++ +I G CR G+L                               
Sbjct: 350 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ 409

Query: 419 -----NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
                + G++L + M  +  SPN+++++IL++ +C+   L  A    +++    + P   
Sbjct: 410 RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVV 469

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           ++N +I   C AG VDEA  +  E+ E+R  PD  ++  L+ G     RM EA  +   M
Sbjct: 470 VFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHM 528

Query: 534 LRIGCAPD--DITVNSL 548
              GCAP   D+TV  L
Sbjct: 529 KLQGCAPRHYDLTVRFL 545



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 6/281 (2%)

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           CSPD+V +  +I+GLCR   +     +L E   ++   PD VTY   I G CK  ++D A
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVL-ERAVRAGCEPDYVTYNVFIDGLCKAERVDDA 61

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             +  +M+     P+ VT+  L+DG  K G +  A  + E+M+  G  P + T++ +IDG
Sbjct: 62  FQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDG 121

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND---- 467
             + G++ +  ++  +M G    P+ + +T LI  LCK  +  +A    K+         
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHAT 181

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEA-NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            VP    Y  +IDG CKAG + EA  V   E  E+   PD VT+T +I G C  GR+ E 
Sbjct: 182 AVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              F++M   G  PD +T  +LI   +K  M  +A R+ ++
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 282



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 95/174 (54%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD+V F+ +I+G CR  +L++   + +        P+  T+ + I+ LCK  R++DA + 
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           LK++     +P    Y  ++DG  KAG +DEA  ++ +M EK   P   T+T++I G   
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
            GR+ EA  IF  ML  GC PD     +LI  L K G P EA+ + + A+  ++
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKH 178



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%)

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C PD V FT++I G C + R+ EA S+  + +R GC PD +T N  I  L K    ++AF
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 563 RIMQRASEDQNL 574
           +++++  E + L
Sbjct: 63  QLLKKMDEKKCL 74


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 231/489 (47%), Gaps = 22/489 (4%)

Query: 95  FVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFS-------- 146
           F ++V + L    Y+     R LCE    + + EVI R+++    L    ++        
Sbjct: 203 FDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCK 262

Query: 147 --RV-------NL----SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
             RV       NL     L     TY  ++  LC++   ++ + + + M   G +P+   
Sbjct: 263 NQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
           +   V    + G   +A  L+++ +   V  S F+YN+L+N++ K    DEA  +F    
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
                P+  T++ILI    + G++  A  F   M   G    +  Y++LISG C++ ++ 
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               L  E+   +   P+VV YTS+ISGYCK G++  A  +Y+EM   GI P+  TF  L
Sbjct: 443 AAKSLFDEM-IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G      M  A  +   M+ +  +P+ VT++ LI+G+C+ G   +  +L DEM  K L
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+ YT+  LI+ LC   R+++AR F+  L+          ++ ++ G+CK G +D+A  
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
              EM  +    D V +++LI G   +      I +  +M   G  PD++   ++I    
Sbjct: 622 ACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANA 681

Query: 554 KGGMPNEAF 562
           K G    AF
Sbjct: 682 KAGNLKMAF 690



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 192/405 (47%), Gaps = 6/405 (1%)

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           M LH     +FD + S G  P+  +    V S         A+ ++ +       +S   
Sbjct: 198 MALH-----LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVAT 252

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN  +  L K     EAV +         + D  T+  L+ GL ++ E +   E   +M 
Sbjct: 253 YNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMI 312

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            FG  P     + L+ GL +   +    +L+ +VK K   +P +  Y ++I+  CK GK+
Sbjct: 313 EFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK-KFGVAPSLFVYNALINSMCKDGKL 371

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  ++N M   G+ P+ VT+++LID F K G +  A +   +M   G    V  +SSL
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G+C+ G+L     L DEM    L PNV  +T LI+  CKE  L++A R   ++    +
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  + +  +I G C A  + EAN +  EM E    P++VT+ +LI GHC +G  V A  
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           + ++M+  G  PD  T   LIS L   G  +EA   M     +Q 
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ 596



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 209/440 (47%), Gaps = 35/440 (7%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++   C++G   + + +FD M ++G  PN  +    +S   + G+   A  L  +  
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++ +T+ + +L++ L   N   EA  +F E       P+  T+N+LI+G  + G   
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +AFE   +M   G  PD  TY  LISGLC    V+   E + +++ + +   + + ++++
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ-KLNEMCFSAL 606

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GYCK G++D A     EM   G+    V ++VLI G  +  +  S   + ++M   G 
Sbjct: 607 LHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGL 666

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA-- 456
            PD V ++++ID   + G L     L D M  +   PNV T+T LIN LCK   ++ A  
Sbjct: 667 RPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAEL 726

Query: 457 --RRFL-------------------------KQLKWNDLVPKPFM-----YNPVIDGFCK 484
             R  L                         K ++ +D++ + F+     YN +I GFCK
Sbjct: 727 LCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCK 786

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G + EA  ++  M +    PD ++++ +I  +C +G + EAI ++  ML  G  PD + 
Sbjct: 787 LGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVA 846

Query: 545 VNSLISCLLKGGMPNEAFRI 564
            N LI      G   +AF +
Sbjct: 847 YNFLIYGCCVTGELTKAFEL 866



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 236/501 (47%), Gaps = 39/501 (7%)

Query: 91  NEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNL 150
           N+ W V       L +S++S T   +  EK+       +I+ LD+ +L L+F  F  ++ 
Sbjct: 41  NQSWRVA------LNNSFISQTLKPHHVEKV-------LIQTLDDSRLALRFFNFLGLHK 87

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           + +HS  ++ +++ +L +  L+     +   +   G  P   + E F+ S     KC+ +
Sbjct: 88  NFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEG-LFESFLDS---YRKCNFS 143

Query: 211 KGL--------LSQFR---PGEVTMSTFM----------YNSLLNALVKQNNADEAVYMF 249
             L          Q R    G V +   M           + +LN L++      A+++F
Sbjct: 144 TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLF 203

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            E      +PD + +  +++ L  + +  +A E    M S GC   + TYN  I GLC+ 
Sbjct: 204 DEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKN 263

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             V    E+   + +K     DV TY +++ G CK+ + +    + NEM   G  PS   
Sbjct: 264 QRVWEAVEIKNLLSYKG-LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAA 322

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
            + L+DG  K GN+ SA  +  ++  FG  P +  +++LI+  C++G+L++   L + M 
Sbjct: 323 VSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K L PN  T++ILI++ CK  +L+ A  FL ++    +    + Y+ +I G CK G + 
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A  +  EM     KP+ V +T LI G+C +G +  A  ++++M   G +P+  T  +LI
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502

Query: 550 SCLLKGGMPNEAFRIMQRASE 570
           S L       EA ++     E
Sbjct: 503 SGLCHANRMAEANKLFGEMVE 523



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 2/331 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC  G     +   + ++ +    N       +    + G+ D A     + 
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREM 626

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V M    Y+ L+  +++Q +    + + K+      +PD   +  +I   ++ G +
Sbjct: 627 LGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNL 686

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K AF  +  M S GC P++VTY  LI+GLC++  + +   L +E+   S   P+  TY  
Sbjct: 687 KMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREM-LASNSLPNQNTYAC 745

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +      G ++KA  +++ +   G   + VT+N+LI GF K+G +  A  +   M+  G
Sbjct: 746 FLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 804

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +++S++I  YCR G L + +KL + M  + ++P+   +  LI   C    L  A 
Sbjct: 805 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 864

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                +    + P    YN +I G C   +V
Sbjct: 865 ELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 895



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 34/190 (17%)

Query: 158 TYNLVMRSLCEMGLHDSVQVV-------------------FDYMRSDGHLPNS-----PM 193
           TY  ++  LC++GL D  +++                    DY+ S+G++  +      +
Sbjct: 707 TYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL 766

Query: 194 IEFFVSSCI----------RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           +E F+++ +          + G+   A  +L       ++     Y++++    ++ +  
Sbjct: 767 LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 826

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           EA+ +++        PDT  +N LI G    GE+ KAFE   DM   G  P+  TYN+LI
Sbjct: 827 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886

Query: 304 SGLCRVNEVA 313
            G C ++ V+
Sbjct: 887 HGTCLMSSVS 896


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 214/460 (46%), Gaps = 38/460 (8%)

Query: 138 LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           +  K LE S V        + + L+   L        V  +F  + S G +      +  
Sbjct: 1   MAAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLV 60

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           V     AG  + A  L+ +   G  T + F+YN ++  L + +   +A  + ++      
Sbjct: 61  VDGLCGAGMANQALELVREL-SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESI 119

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P+ +T+ IL+ GL R  + K A E F +M   GC P+ +TY TLI  L R  E+     
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           ++ E +   E   DV+T T+++ G CK  ++D A     EM   G++P+ VT++ L+ GF
Sbjct: 180 VMIEQR-SLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGF 238

Query: 378 ------------------GKVGNMVSAEY------------------MRERMLSFGYLPD 401
                              K G++ +A Y                    E +   G +PD
Sbjct: 239 RQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPD 298

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VVT+S LI+ + R GQ +  L+L ++M+   + P+V T++ LIN LCKE +  DA R L+
Sbjct: 299 VVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLE 358

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            ++     P    YN V+DG CK+G +DE + +   M + RC PD VT++I++ G    G
Sbjct: 359 LMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAG 418

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +  A+ +F  +      PD    + +I+ L + G   EA
Sbjct: 419 MLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 213/452 (47%), Gaps = 43/452 (9%)

Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY LV+  LC  G+ + ++++V +   S  + P   +    ++   RA +   A  +L +
Sbjct: 56  TYKLVVDGLCGAGMANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEK 113

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  + F Y  LLN L + N    A  +F+E  R   +P+  T+  LIQ LSR GE
Sbjct: 114 MVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGE 173

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A     +  S     D++T  T++ GLC+ + +    + ++E++ +    P+ VTY+
Sbjct: 174 IDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMR-QMGVRPNEVTYS 232

Query: 337 SVISGY------------------------------------CKLGKMDKATGIYNEMNS 360
           +++ G+                                    CK G +D+A     E+  
Sbjct: 233 NLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQ 292

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+ P  VT+++LI+ F + G   ++  + E M   G  PDVVT+S+LI+  C+  +   
Sbjct: 293 SGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQD 352

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             +L + M+     PNV T+  +++ LCK  ++++  R  + +  +   P    Y+ +++
Sbjct: 353 AFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMN 412

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G  KAG +D A  +   ++  R  PD   ++++I   C  G++ EA  +++ M  +  A 
Sbjct: 413 GLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM-EVTVAG 471

Query: 541 DDI--TVNSLISCLLKGGMPNEAFRIMQRASE 570
           D+I   +  L++ L      + A RI++ A E
Sbjct: 472 DNICRALAGLVAALCDAKRTDSARRIVEVARE 503



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 133/266 (50%), Gaps = 5/266 (1%)

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +LL+    ++    D   +T + +   +  K  +   ++  + S G+     T+ +++DG
Sbjct: 4   KLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDG 63

Query: 377 FGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
               G    A E +RE  LS  Y P V  ++ +I G CR  ++    K+ ++M  +++ P
Sbjct: 64  LCGAGMANQALELVRE--LSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV+T+TIL+N LC+ N+   AR   +++K N   P P  Y  +I    +AG +DEA  ++
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            E        D +T T ++ G C   R+ +A+    +M ++G  P+++T ++L+    + 
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 556 GMPNEAFRIM--QRASEDQNLQLPSW 579
           G  +   R    ++A +  +L+  ++
Sbjct: 242 GELDRVIRFFEEEKARKGGSLEAAAY 267



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 1/220 (0%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           ++F E  +     +     Y   + +LC+ G  D  +   + +R  G +P+       ++
Sbjct: 248 IRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLIN 307

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           +  RAG+ DA+  LL   R   V      Y++L+N L K+    +A  + +      S P
Sbjct: 308 TFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPP 367

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +  T+N ++ GL + G++ +    +  M    CSPD+VTY+ +++GL +   +    +L 
Sbjct: 368 NVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLF 427

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + +K   E  PD   Y+ VI+  C+ GK+++A G+Y+ M 
Sbjct: 428 ELIKSSRE-GPDAAAYSMVITSLCRAGKLEEACGMYHGME 466


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 202/399 (50%), Gaps = 2/399 (0%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M+  G  P+       ++     G+      L+ + +   +  + + YNS++  L K   
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            D+A  + +E       PDT  +  LI G  ++G ++ A++ F +M      PD + Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           +I GLCR  ++    ++  ++ F     PD VTYT++I GYCK G+M+KA  ++N+M   
Sbjct: 121 VICGLCRCGKMMEADKVFNKM-FSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+ P+ VT+  L DG  K+G + +A  +   M   G   ++ T++SL++G C++G + Q 
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           +KL +EM+   + P+  TFT L++A CK   +  A   L+++    L P    +N +++G
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           FC +G +++   ++A M EK   P+  T+  L+  +C++  M     I+  M   G  PD
Sbjct: 300 FCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPD 359

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASEDQ-NLQLPSW 579
             T N LI    K     EA+ + +  +E   NL   S+
Sbjct: 360 SNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSY 398



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 188/380 (49%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ V+   C  G    V  +   M+  G  PN       +    ++GK D A+ +L + 
Sbjct: 12  SYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +   T +Y +L++   K  N   A  +F E  +    PD   +  +I GL R G++
Sbjct: 72  INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M S G  PD VTY TLI G C+  E+ +   L  ++  +S  +P+VVTYT+
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM-VQSGLTPNVVTYTA 190

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +  G CKLG++D A  + +EM   G++ +  T+N L++G  K GN+  A  + E M   G
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +TF++L+D YC+ G++ +  +L  EM  + L P V TF +L+N  C    L D  
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGE 310

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L  +    ++P    YN ++  +C   N+     I   M  +   PD  T+ ILI GH
Sbjct: 311 RLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGH 370

Query: 518 CMKGRMVEAISIFNKMLRIG 537
           C    M EA  +  +M   G
Sbjct: 371 CKARNMKEAWFLHKEMAEKG 390



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 197/421 (46%), Gaps = 1/421 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            L  +  TYN ++  LC+ G  D  + V   M + G +P++ +    +    + G   AA
Sbjct: 40  GLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAA 99

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +     +      Y +++  L +     EA  +F + F    +PD  T+  LI G
Sbjct: 100 YKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDG 159

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             + GE++KAF     M   G +P++VTY  L  GLC++ +V   +ELL E+  K     
Sbjct: 160 YCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG-LQL 218

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           ++ TY S+++G CK G + +A  +  EM   G+ P  +TF  L+D + K G MV A  + 
Sbjct: 219 NICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELL 278

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             ML  G  P V+TF+ L++G+C +G L  G +L   M  K + PN  T+  L+   C  
Sbjct: 279 REMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIR 338

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           N +       K +    ++P    YN +I G CKA N+ EA  +  EM EK       ++
Sbjct: 339 NNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSY 398

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +I G   K ++ EA  +F +M R G A D    N  +      G    A  +   A E
Sbjct: 399 NSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458

Query: 571 D 571
           +
Sbjct: 459 N 459



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 1/280 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  +  TY  +   LC++G  D+   +   M   G   N       V+   ++G  
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  L+ +     +   T  + +L++A  K     +A  + +E      QP   TFN+L
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + G    G ++        M   G  P+  TYN+L+   C  N +    E+ K +  +  
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG- 355

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD  TY  +I G+CK   M +A  ++ EM   G   +A ++N +I GF K   +  A 
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEAR 415

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            + E M   G   D   ++  +D     G +   L+LCDE
Sbjct: 416 ELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 209/434 (48%), Gaps = 35/434 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N  M SLC+ G     + +F YM + GH+P+       +      G+      L    
Sbjct: 371 TFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   +N L++A  K+   DEA+ +F E      +PD  T++ LI    R+G +
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRL 490

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M S G  P+ V Y++LI G C   ++ +  EL+ E+  K    P++V ++S
Sbjct: 491 ADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSS 550

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C  G++  A  ++N +   G +P+ VTFN LIDG+  VG M  A  + + M+S G
Sbjct: 551 IIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 610

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+++L+ GYC++G+++ GL L  EM  K + P   T++I+++ L    R + A+
Sbjct: 611 IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAK 670

Query: 458 R-------------------FLKQLKWNDLVPKPF----------------MYNPVIDGF 482
           +                    LK L  NDL  +                  + N VI+  
Sbjct: 671 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K    +EAN + A +      P+  T+ ++I     +G + EA ++F+ M + GCAP  
Sbjct: 731 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSS 790

Query: 543 ITVNSLISCLLKGG 556
             +N +I  LL+ G
Sbjct: 791 RLLNDIIRMLLQKG 804



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 213/450 (47%), Gaps = 40/450 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD-AAKGL 213
           S  TY ++M   C     D     F  +   G    +     F+     A + D A   L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGL 271
           L +        +   YN+++ +L   + + EA+ M +   +   +  PD  +FN +I G 
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + GEV KA     +M   G  PD+VTYN+++  LC+   + +   +L+++  K    PD
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG-VEPD 333

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            +TYT++I GY   G   ++  ++ +M S G+ P  VTFN  +    K G    AE + +
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393

Query: 392 RMLSFGYLPDVVTFSSLIDGY-----------------------------------CRNG 416
            M + G++PD+V++S L+ GY                                    + G
Sbjct: 394 YMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRG 453

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            +++ + +  EM+G+ + P+V T++ LI+A C+  RL DA     Q+    L P   +Y+
Sbjct: 454 MMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYH 513

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRC-KPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
            +I GFC  G++ +A  +V+EM  K   +P+ V F+ +I   C +GR+++A  +FN ++ 
Sbjct: 514 SLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIH 573

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           IG  P  +T NSLI      G   +AF ++
Sbjct: 574 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 603



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 213/483 (44%), Gaps = 74/483 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           +YN V++SLC          +   M  +G   +  ++ F   +    + G+   A  L++
Sbjct: 229 SYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLIN 288

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     V      YNS+++AL K    D+A  + ++      +PD  T+  +I G S  G
Sbjct: 289 EMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSG 348

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             K++ + F  M S G  P IVT+N+ +S LC+        E+ + +  K    PD+V+Y
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHM-PDLVSY 407

Query: 336 TSVISGYC-----------------------------------KLGKMDKATGIYNEMNS 360
           + ++ GY                                    K G MD+A  ++ EM  
Sbjct: 408 SILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQG 467

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G++P  VT++ LI  F ++G +  A     +M+S G  P+ V + SLI G+C +G L +
Sbjct: 468 QGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVK 527

Query: 421 GLKLCDEMKGKNL-SPNVYTFTILINALCKENRLNDARRFLKQL----------KWNDLV 469
             +L  EM  K +  PN+  F+ +I++LC E R+ DA      +           +N L+
Sbjct: 528 AKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLI 587

Query: 470 -------------------------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
                                    P    YN ++ G+CK+G +D+  ++  EM  K+ K
Sbjct: 588 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVK 647

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P  VT++I++ G    GR   A  +F++M+  G A D  T   L+  L +  + +EA  +
Sbjct: 648 PTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITL 707

Query: 565 MQR 567
             +
Sbjct: 708 FHK 710



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 184/404 (45%), Gaps = 14/404 (3%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG---KCDAAKGLL---------SQFRPG 220
           D    +FD +   G   ++P +  F+++  RA     C     L+          +  P 
Sbjct: 91  DDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 150

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
              +S   Y  L++   +    D     F    R   +  T   N  ++ L       +A
Sbjct: 151 VAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA 210

Query: 281 FE-FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEFSPDVVTYTSV 338
            +   + M   GC P+ ++YNT+I  LC  +      ++++ + K     SPDVV++ +V
Sbjct: 211 VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 270

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+ K G++ KA  + NEM   G++P  VT+N ++D   K   M  AE +  +M+  G 
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD +T++++I GY  +G   +  K+  +M  K L P + TF   +++LCK  R  DA  
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE 390

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + +     +P    Y+ ++ G+   G   + N +   M +K    +   F ILI  H 
Sbjct: 391 IFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHA 450

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            +G M EA+ +F +M   G  PD +T ++LIS   + G   +A 
Sbjct: 451 KRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAM 494



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 2/369 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N+++ +  + G+ D   +VF  M+  G  P+       +S+  R G+   A    SQ  
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGEV 277
              +  +T +Y+SL++      +  +A  +  E   +   +P+   F+ +I  L   G V
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  +   G  P IVT+N+LI G C V ++ +   +L +        PDVVTY +
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL-DAMVSVGIEPDVVTYNT 620

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++SGYCK GK+D    ++ EM    +KP+ VT+++++DG    G   +A+ M   M+  G
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSG 680

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+ T+  L+ G CRN   ++ + L  ++   +   ++     +INAL K  R  +A 
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  + LVP    Y  +I    K G+V+EA+ + + ME+  C P       +I   
Sbjct: 741 DLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 800

Query: 518 CMKGRMVEA 526
             KG +V+A
Sbjct: 801 LQKGDIVKA 809



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 139/329 (42%), Gaps = 27/329 (8%)

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           + D+A ++F E  R  +       N  +  L+R  +            S  CS       
Sbjct: 89  STDDAHHLFDELLRQGTPVHNPALNGFLAALARAPD------------SVSCSNGPALVL 136

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            L + +CR     R   L             V TY  ++   C+  + D     +  +  
Sbjct: 137 ALFNRICREEAGPRVAPL------------SVHTYGILMDCCCRARRPDLGPAFFARLLR 184

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
            G++   +  N  +           A + +  RM   G +P+ ++++++I   C + +  
Sbjct: 185 AGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQ 244

Query: 420 QGLKLCDEM--KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + L +   M  +G   SP+V +F  +I+   K+  ++ A   + ++    + P    YN 
Sbjct: 245 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNS 304

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++D  CKA  +D+A +++ +M +K  +PD +T+T +I G+   G   E+  +F KM   G
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             P  +T NS +S L K G   +A  I Q
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V T+  L+D  CR  + + G      +    L          +  LC   R ++A   L 
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215

Query: 462 QLKWNDL--VPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPDKVTFTILIIGH 517
             + +DL  VP    YN VI   C      EA  +V  M  E  RC PD V+F  +I G 
Sbjct: 216 H-RMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +G + +A ++ N+M++ G  PD +T NS++  L K    ++A  ++++
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQ 324



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 105/277 (37%), Gaps = 36/277 (12%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ +     TYN ++   C+ G  D   ++F  M      P +      +     AG+ 
Sbjct: 607 VSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRT 666

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            AAK +  +       +    Y  LL  L + +  DEA+ +F                  
Sbjct: 667 SAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF------------------ 708

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
                            + +G+  C  DI   NT+I+ L +V      ++L   +   S 
Sbjct: 709 -----------------HKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAIS-TSG 750

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+V TY  +I    K G +++A  +++ M   G  PS+   N +I    + G++V A 
Sbjct: 751 LVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAG 810

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           Y   ++       +  T S L+  +   G+  + +K 
Sbjct: 811 YYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 847


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 180/336 (53%), Gaps = 1/336 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN L+N   K+ +  +A  +F E  +   +P T +FN LI GL +   + + F     M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                PD+ TY+ LI GLC+   +    +L  E++ +    P+ +T+T++I G  +  +M
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG-LRPNGITFTALIDGQYRSRRM 344

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D A   Y++M + G+KP  V +N L++G  KVG++  A  + + M   G  PD +T+++L
Sbjct: 345 DSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTL 404

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDGYC+ G L   +++   M  + +  +   FT LI+  C++ R+ DA R L+++    +
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  VIDG+CK GNV     ++ EM+    KP  +T+ +L+ G C +G+M  A  
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +   ML +G  PDDIT N L+    K G   +  ++
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 168/332 (50%), Gaps = 1/332 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C+ G     +++F+ +R  G  P +      ++   ++   D    L     
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    F Y+ L++ L K+   D A  +F E  +   +P+  TF  LI G  R   + 
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   ++ M + G  PD+V YNTL++GLC+V +V +  +L+ E+K      PD +TYT++
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVG-MKPDKITYTTL 404

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYCK G ++ A  I   MN  G+    V F  LI GF + G +  AE     M+  G 
Sbjct: 405 IDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGM 464

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T++ +IDGYC+ G +  G KL  EM+     P V T+ +L+N LCK+ ++ +A  
Sbjct: 465 KPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
            L+ +    + P    YN +++G CK G  ++
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNGKAED 556



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 184/349 (52%), Gaps = 5/349 (1%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  P        ++   + G    AK + ++ R   +  +T  +N+L+N L K  N DE 
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 246 VYMFK--EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
             + K  E  R+Y  PD +T+++LI GL + G +  A + F +M   G  P+ +T+  LI
Sbjct: 278 FRLKKTMEENRIY--PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            G  R   +        ++       PD+V Y ++++G CK+G ++KA  + +EM   G+
Sbjct: 336 DGQYRSRRMDSAMNTYHQM-LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGM 394

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP  +T+  LIDG+ K G++ SA  +R+ M   G + D V F++LI G+CR+G++    +
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAER 454

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
              EM    + P+  T+T++I+  CK+  +    + LK+++ N   P    YN +++G C
Sbjct: 455 TLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLC 514

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           K G +  AN+++  M      PD +T+ IL+ GHC  G+  + + + N+
Sbjct: 515 KQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 138/270 (51%), Gaps = 1/270 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC+ G  D  + +FD M+  G  PN       +    R+ + D+A     Q 
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 354

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V     MYN+LLN L K  + ++A  +  E   +  +PD  T+  LI G  + G++
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E    M   G   D V +  LISG CR   V      L+E+  ++   PD  TYT 
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM-VEAGMKPDDATYTM 473

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI GYCK G +     +  EM   G KP  +T+NVL++G  K G M +A  + E ML+ G
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             PD +T++ L++G+C+NG+    LKL +E
Sbjct: 534 VTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 134/243 (55%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F P V  Y  +I+ +CK G +  A  I+NE+   G++P+ V+FN LI+G  K  N+    
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +++ M      PDV T+S LI G C+ G+L+   +L DEM+ + L PN  TFT LI+  
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            +  R++ A     Q+    + P   MYN +++G CK G+V++A  +V EM+    KPDK
Sbjct: 339 YRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDK 398

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +T+T LI G+C +G +  A+ I   M   G   D++   +LIS   + G   +A R ++ 
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458

Query: 568 ASE 570
             E
Sbjct: 459 MVE 461



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 35/180 (19%)

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F +L+  Y  +G ++  ++    ++  N     +    L++ +   N       F  ++ 
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE--------------------------- 497
                PK   YN +I+ FCK G++ +A +I  E                           
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 498 --------MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
                   MEE R  PD  T+++LI G C +GR+  A  +F++M + G  P+ IT  +LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%)

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           +E+ E    P    + ILI   C +G + +A  IFN++ + G  P  ++ N+LI+ L K 
Sbjct: 212 SEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS 271

Query: 556 GMPNEAFRIMQRASEDQ 572
              +E FR+ +   E++
Sbjct: 272 RNLDEGFRLKKTMEENR 288


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 195/415 (46%), Gaps = 7/415 (1%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           + T+  ++ +L   G  D    ++  M   G+ P   + +  + +  +AGK D A  +  
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                +V  S   YNSL++   K    D+ + +  +     + PD  T+NIL+ G SR  
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRAN 313

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A E F  + S+GC P+  TY T+I GL     +        E       + DV++Y
Sbjct: 314 RLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE-------ALDVISY 366

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T+VI G     ++D+A  ++ ++ + G  P+ V +  +IDG  K G +       E M  
Sbjct: 367 TTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSG 426

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
              +P   T++ +IDG C+   L    K+ ++M  K   P+  T+T LI+   K +++++
Sbjct: 427 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 486

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           AR+ L  +      P    Y  ++ GFCK   ++EA  ++A+M E+ C+P    FT L+ 
Sbjct: 487 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 546

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +  KGR  EA  +  +M   GCAPD I   SLI  L   G   EA  +     E
Sbjct: 547 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 601



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 181/354 (51%), Gaps = 7/354 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +LN L K    D+A+ +F E   +  +P   ++N +I GL+ I ++ +A++FF  M  
Sbjct: 24  NIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID 83

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            GC PD++ + TLI G C+  +   GH LL +      F PDV  YTSVI GYCK G +D
Sbjct: 84  NGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL--KRFRPDVFLYTSVIHGYCKAGDLD 141

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
               I  EM + G  P A  + VLID   K+G +  A  + ERM   G L D VTF +LI
Sbjct: 142 TGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLI 201

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +    +G+L++  +L  EM  +   P +     LI ALCK  ++++A    + +    + 
Sbjct: 202 EALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVA 261

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                YN ++DG+CK G VD+   ++ +M E    PD  T+ IL+ G     R+ +A+ +
Sbjct: 262 TSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALEL 321

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
           F  +   GC P+  T  ++I  L       EA     +A  D+ L + S+   +
Sbjct: 322 FKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA-----KAFFDEALDVISYTTVI 370



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 201/412 (48%), Gaps = 7/412 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  V+   C+ G  D+   + + M + G +P++      +    + G+ D A  L  + R
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                     + +L+ AL      DEA  +++E      +P     + LI  L + G+V 
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVD 246

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A E +  + +   +   V YN+L+ G C++  V  G +LL ++     F PD+ TY  +
Sbjct: 247 EANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF-PDIQTYNIL 305

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ++G+ +  ++D A  ++  ++S G KP+A T+  +I G      +  A+ M E    F  
Sbjct: 306 VAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG------LYDAQRMEEAKAFFDE 359

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             DV++++++I G   + ++++  +L +++K    SPNV  +T +I+ L K  R+ D  +
Sbjct: 360 ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 419

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + +  +  VP    Y  VIDG CKA  + +A  +  +M +K C PD +T+T LI G  
Sbjct: 420 NFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 479

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              +M EA  + + ML  G  P  +T  S++    K  M NEA  ++ +  E
Sbjct: 480 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 531



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 201/441 (45%), Gaps = 11/441 (2%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           + R+D+   GLK L    V        +TYN+++         D    +F  + S G  P
Sbjct: 277 LGRVDD---GLKLL-LQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKP 332

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N+      +     A + + AK    +       +    Y +++  L      DEA  +F
Sbjct: 333 NAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELF 386

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           ++       P+   +  +I GL + G ++   + F DM    C P   TY  +I GLC+ 
Sbjct: 387 EKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKA 446

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             +    ++ +++  K    PD +TYT++I G+ K  KMD+A  + + M + G +P+AVT
Sbjct: 447 QMLPDACKVFEQMVQKG-CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVT 505

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +  ++ GF K+  +  A+ +  +M   G  P +  F+SL+  Y   G+  +  ++  EM 
Sbjct: 506 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            +  +P+V  +T LI+ L    R+ +AR     +      P    Y  +I  F K GNV+
Sbjct: 566 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 625

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A  I+  M +    PD   +  L+ G+    R+ +A  ++++M+  G  P+ +T N L+
Sbjct: 626 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 685

Query: 550 SCLLKGGMPNEAFRIMQRASE 570
             L K G  + AF + +   E
Sbjct: 686 HGLFKDGKTDRAFSLFKEMLE 706



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 184/369 (49%), Gaps = 2/369 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++    +    D  + + D M + G  P +      V    +    + AK +++Q 
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R        F++ SLL+  + +  A+EA  +  E       PD   +  LI  L   G V
Sbjct: 530 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 589

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   GC+PD +TY T+I    ++  V    E+L E+  KS   PD   Y S
Sbjct: 590 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL-ELMAKSGVGPDCFAYNS 648

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY KL ++D+A G+Y+ M + GIKP+AVTFNVL+ G  K G    A  + + ML   
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708

Query: 398 YLP-DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            +P  +V+++ LIDG  + G++++      EM  + + P  +T+T LI +L K  R+ +A
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++ ++ +    + P    Y+ +I G   +  VD A  +  EM ++ C P++VT+ +L  G
Sbjct: 769 KKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 828

Query: 517 HCMKGRMVE 525
               GR ++
Sbjct: 829 FRAAGRALD 837



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 187/411 (45%), Gaps = 9/411 (2%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            YN +M   C++G + D ++++   +  D + P+       V+   RA + D A  L   
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECD-NFPDIQTYNILVAGFSRANRLDDALELFKL 324

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y +++  L      +EA   F E        D  ++  +I+GL+    
Sbjct: 325 LSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKR 378

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A E F  + + GCSP++V Y  +I GL +   +  G +  +++   S   P   TYT
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS-GSSCVPTRTTYT 437

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            VI G CK   +  A  ++ +M   G  P  +T+  LIDGF K   M  A  + + ML+ 
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P  VT+ S++ G+C+   +N+  ++  +M+ +   P ++ FT L++    + R  +A
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L ++      P   +Y  +ID     G V EA  +   M EK C PD +T+  +I  
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 617

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
               G +  A  I   M + G  PD    NSL+   +K    ++AF +  R
Sbjct: 618 FSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 204/445 (45%), Gaps = 35/445 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V++ L +    D    +F+ +++ G  PN       +   ++AG+ +         
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y  +++ L K     +A  +F++  +    PDT T+  LI G S+  ++
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK----------FKSE 327
            +A +    M + G  P  VTY +++ G C+++ +    E++ +++          F S 
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544

Query: 328 FS------------------------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            S                        PDV+ YTS+I      G++ +A  +++ M   G 
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P A+T+  +I  F K+GN+ +A  + E M   G  PD   ++SL+DGY +  +++Q   
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM-YNPVIDGF 482
           + D M    + PN  TF +L++ L K+ + + A    K++   D VP   + Y  +IDG 
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            KAG V EA     EM ++   P+  T+T LI      GR+ EA  +   M+++G  PD 
Sbjct: 725 GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 784

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQR 567
              ++LI+ L+   M + A+ + Q 
Sbjct: 785 QAYSALITGLIDSSMVDTAWDVFQE 809



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 192/392 (48%), Gaps = 2/392 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +V+  LC+  +      VF+ M   G +P++      +    +A K D A+ LL   
Sbjct: 435 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 494

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y S+++   K +  +EA  +  +      +P  + F  L+      G  
Sbjct: 495 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 554

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A++   +M + GC+PD++ Y +LI  L     V     +   +  K   +PD +TY +
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG-CAPDALTYGT 613

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  + K+G ++ A  I   M   G+ P    +N L+DG+ K+  +  A  + +RM++ G
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLNDA 456
             P+ VTF+ L+ G  ++G+ ++   L  EM  K+ + P + ++TILI+ L K  R+++A
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +++    ++P+   Y  +I    KAG + EA  +V +M +    PD   ++ LI G
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
                 +  A  +F +M++ GCAP+++T   L
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 165/327 (50%), Gaps = 2/327 (0%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           +EA+   KE       PD    NI++ GL +  ++ KA E F +M S GC P IV+YNT+
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ISGL  ++++   ++    +   +   PDV+ +T++I G+CK G+      + N+     
Sbjct: 62  ISGLASIDKMDEAYKFFNSM-IDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-R 119

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +P    +  +I G+ K G++ +   + E ML+ G +PD   +  LID  C+ G++++  
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L + M+      +  TF  LI AL    +L++A    +++      P   + + +I   
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CKAG VDEAN I   +  K+    +V +  L+ G+C  GR+ + + +  +M+     PD 
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRAS 569
            T N L++   +    ++A  + +  S
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLS 326



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 148/298 (49%), Gaps = 2/298 (0%)

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A +   +M + G  PD+V  N +++GLC+  ++ +  EL  E+       P +V+Y 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMG-CEPTIVSYN 59

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +VISG   + KMD+A   +N M   G +P  + F  LI GF K G       +  + L  
Sbjct: 60  TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK- 118

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            + PDV  ++S+I GYC+ G L+ G K+ +EM      P+   + +LI+ LCK  R+++A
Sbjct: 119 RFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               ++++ +  +     +  +I+     G +DEA  +  EM E+  +P       LI  
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            C  G++ EA  I+  ++    A   +  NSL+    K G  ++  +++ +  E  N 
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF 296



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 2/236 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++++  ++G  ++   + + M   G  P+       +   ++  + D A G+  + 
Sbjct: 610 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 669

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-TFNILIQGLSRIGE 276
               +  +   +N L++ L K    D A  +FKE       P T  ++ ILI GL + G 
Sbjct: 670 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGR 729

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +AF  F +M   G  P+  TY +LI  L +   +    +L++++  K   +PDV  Y+
Sbjct: 730 VSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM-VKLGVNPDVQAYS 788

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           ++I+G      +D A  ++ EM   G  P+ VT+ VL  GF   G  +  E +++ 
Sbjct: 789 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQH 844


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 257/576 (44%), Gaps = 69/576 (11%)

Query: 30  FC-GHKSEAAANGVGLPMTLLFFTVRPSRVRASTIAAIAHFHGLANGGSRPFDEKEVNYR 88
           FC GH+ + A   +GL   +    V P+ V  + I      HGL   G    DE    YR
Sbjct: 266 FCKGHREDDA---IGLFSKMEKLGVAPNVVTYNNI-----IHGLCKSGR--LDEA---YR 312

Query: 89  CSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRV 148
              +    KV  +L+  S ++               N L  ++++D     LK  E S +
Sbjct: 313 FKEKMVKEKVSPSLITYSVFI---------------NGLIKLEKIDEANCVLK--EMSEL 355

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
               N     YN ++   C+MG       + D M S G  PNS  +   +    ++ +  
Sbjct: 356 GFVPNEV--VYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIG 413

Query: 209 AAKGLLSQF--RPGEVTMSTF---------------------------------MYNSLL 233
            A+ +L +   R   +   +F                                 +  +L+
Sbjct: 414 QAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLV 473

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           + L K     EAV ++         P+  T N LI GL + G +++  +   DM   G  
Sbjct: 474 SGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLV 533

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
            D +TYNTLISG C+  +V  G EL KE   K    PD+ T+  ++ G C   K+D+A+ 
Sbjct: 534 FDRITYNTLISGCCKEGKVKEGFEL-KEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR 592

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +++E    G  P+  T+ V+IDG+ K   +   E +   ++S     + V ++SLI  YC
Sbjct: 593 LWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYC 652

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
            NG +N   +L D+MK + +  +  T++ L++ LC    ++DA+  L +++   L+P   
Sbjct: 653 INGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVV 712

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            Y  +I G+ K G +++ N+++ EM      P+K T+TI+I G C  G+  EA  + N+M
Sbjct: 713 CYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEM 772

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
              G  PD +T N+  + L K G   EAF++    S
Sbjct: 773 TEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS 808



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 186/361 (51%), Gaps = 1/361 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN  ++   VS   +AGK   A  L  +        +    N+L++ L K  N  E + +
Sbjct: 464 PNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKL 523

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            ++        D  T+N LI G  + G+VK+ FE   +M   G  PDI T+N L+ GLC 
Sbjct: 524 LRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCN 583

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
            +++     L  E K K+ + P+V TY  +I GYCK  K+++   + NE+ S  ++ ++V
Sbjct: 584 ADKIDEASRLWHECK-KNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSV 642

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            +N LI  +   GNM +A  +R+ M S G L    T+SSL+ G C  G ++    L DEM
Sbjct: 643 VYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEM 702

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           + + L PNV  +T +I    K  ++N     L+++  +++ P  F Y  +IDGFCK G  
Sbjct: 703 RKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKT 762

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  ++ EM EK   PD VT+     G C +G++ EA  + ++M       D+IT  +L
Sbjct: 763 KEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTL 822

Query: 549 I 549
           I
Sbjct: 823 I 823



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 215/452 (47%), Gaps = 37/452 (8%)

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           H F T   ++ + C+    D    +F  M   G  PN       +    ++G+ D A   
Sbjct: 257 HLFST---MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +    +V+ S   Y+  +N L+K    DEA  + KE   L   P+   +N LI G  +
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 373

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE------------ 321
           +G + +A +   DM S G SP+ VT N+LI G C+ +++ +   +L+E            
Sbjct: 374 MGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGS 433

Query: 322 ---------VKFK-------------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
                    +KF+                 P+    T+++SG CK GK  +A  ++  + 
Sbjct: 434 FSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLL 493

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  P+ VT N LI G  K GNM     +   ML  G + D +T+++LI G C+ G++ 
Sbjct: 494 GKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVK 553

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +G +L +EM  K + P++YTF +L++ LC  +++++A R   + K N  VP  + Y  +I
Sbjct: 554 EGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI 613

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG+CKA  V+E   ++ E+  K+ + + V +  LI  +C+ G M  A  + + M   G  
Sbjct: 614 DGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
               T +SL+  L   G+ ++A  ++    ++
Sbjct: 674 LSCATYSSLMHGLCNIGLVDDAKHLLDEMRKE 705



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 201/394 (51%), Gaps = 1/394 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VF  +   G  P+     F +SS ++A +   +  +      G +     ++++++NA  
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFC 267

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K +  D+A+ +F +  +L   P+  T+N +I GL + G + +A+ F   M     SP ++
Sbjct: 268 KGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLI 327

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+  I+GL ++ ++   + +LKE+  +  F P+ V Y ++I GYCK+G + +A  I ++
Sbjct: 328 TYSVFINGLIKLEKIDEANCVLKEMS-ELGFVPNEVVYNTLIDGYCKMGNISEALKIRDD 386

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S GI P++VT N LI GF K   +  AE + E M+  G   +  +FS +I+  C   +
Sbjct: 387 MLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFR 446

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
               L    EM  +NL PN    T L++ LCK  +  +A     +L     VP     N 
Sbjct: 447 FVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNA 506

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I G CKAGN+ E   ++ +M E+    D++T+  LI G C +G++ E   +  +M++ G
Sbjct: 507 LIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG 566

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             PD  T N L+  L      +EA R+     ++
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN 600



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 177/355 (49%), Gaps = 1/355 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++  LC+ G       ++  +   G +PN       +    +AG       LL       
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +      YN+L++   K+    E   + +E  +   QPD +TFN+L+ GL    ++ +A 
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             +++    G  P++ TY  +I G C+ N+V  G  LL E+  K +   + V Y S+I  
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSK-KLELNSVVYNSLIRA 650

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YC  G M+ A  + ++M S G+  S  T++ L+ G   +G +  A+++ + M   G LP+
Sbjct: 651 YCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPN 710

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VV ++++I GY + GQ+N+   +  EM   N+ PN +T+TI+I+  CK  +  +A + L 
Sbjct: 711 VVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLN 770

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++    ++P    YN   +G CK G V+EA  +  EM       D++T+T LI G
Sbjct: 771 EMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 144/288 (50%), Gaps = 1/288 (0%)

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A + F  +   G  P + T   L+S L + NE+ + +E+   +       PDV  ++++I
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGG-IIPDVHLFSTMI 263

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           + +CK  + D A G++++M   G+ P+ VT+N +I G  K G +  A   +E+M+     
Sbjct: 264 NAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVS 323

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P ++T+S  I+G  +  ++++   +  EM      PN   +  LI+  CK   +++A + 
Sbjct: 324 PSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKI 383

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
              +    + P     N +I GFCK+  + +A  ++ EM  +    ++ +F+++I   C+
Sbjct: 384 RDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCL 443

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           K R V A+    +ML     P+D  + +L+S L K G   EA  +  R
Sbjct: 444 KFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCR 491



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 1/163 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY+ +M  LC +GL D  + + D MR +G LPN       +    + G+ +    +L
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVL 734

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  + F Y  +++   K     EA  +  E       PD  T+N    GL + 
Sbjct: 735 QEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKE 794

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           G+V++AF+   +M S     D +TY TLI G C     A   E
Sbjct: 795 GKVEEAFKVCDEMSSGAVCLDEITYTTLIDG-CHQPSTATNQE 836



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 35/142 (24%)

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           K L P++ T T L+++L K N L  +      +    ++P   +++ +I+ FCK      
Sbjct: 215 KGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCK------ 268

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
                                    GH    R  +AI +F+KM ++G AP+ +T N++I 
Sbjct: 269 -------------------------GH----REDDAIGLFSKMEKLGVAPNVVTYNNIIH 299

Query: 551 CLLKGGMPNEAFRIMQRASEDQ 572
            L K G  +EA+R  ++  +++
Sbjct: 300 GLCKSGRLDEAYRFKEKMVKEK 321


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 209/449 (46%), Gaps = 49/449 (10%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K  N V+R L +    D +  V   M   G  P+       + S ++ G+ D    LL +
Sbjct: 203 KDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKE 262

Query: 217 FR-------PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
                    P +VT     +N ++  L ++ + +EA  M  E  RL  +  ++T+N LI 
Sbjct: 263 METRGSGCLPNDVT-----HNVVITGLARKGDLEEAAEMV-EGMRLSKKASSFTYNPLIT 316

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL   G VKKA +   +M + G  P +VTYN +I GL +  +V        E++      
Sbjct: 317 GLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMG-LQ 375

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV+TY S+++GYCK G + +A  ++ ++   G+ P+ +T+N+LIDG+ ++G++  A  +
Sbjct: 376 PDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRL 435

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY----------- 438
           +E M+  G LPDV T++ L+ G      L    +  DEM  K L P+ +           
Sbjct: 436 KEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELT 495

Query: 439 ------------------------TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
                                   T+ ILI+ LCK   LNDA+    ++  N L P    
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT 555

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y  +I   C+ G + EA     +M      P  VT+T+ I  +C +G +  A   F KML
Sbjct: 556 YTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKML 615

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             G  P++IT N LI  L + G    A+R
Sbjct: 616 EEGVEPNEITYNVLIHALCRTGRTQLAYR 644



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 199/421 (47%), Gaps = 2/421 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + LS   S  TYN ++  L   G       +   M ++G +P        +   +++G+ 
Sbjct: 300 MRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQV 359

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +AA+    + R   +      YNSLLN   K  +  EA+ +F +       P   T+NIL
Sbjct: 360 EAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNIL 419

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  R+G++++A     +M   GC PD+ TY  L+ G      +A   E   E+  K  
Sbjct: 420 IDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKG- 478

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD   Y + I     LG + KA  +   M   GI    VT+N+LIDG  K GN+  A+
Sbjct: 479 LQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAK 538

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            ++ +M+  G  PD +T++ LI  +C  G L +  K   +M    L+P+  T+T+ I+A 
Sbjct: 539 DLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAY 598

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+   L  A  + +++    + P    YN +I   C+ G    A     EM E+   P+K
Sbjct: 599 CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNK 658

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+T+LI G+C +G   +A+  + +M + G  PD +T  +L     +G M N A   ++ 
Sbjct: 659 YTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHM-NHAIEYLEN 717

Query: 568 A 568
           A
Sbjct: 718 A 718



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 209/453 (46%), Gaps = 39/453 (8%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM--RSDGHLPNSPMIEFFVSSCIRAG 205
           + L +  S  TYN ++ S  + G +D V ++   M  R  G LPN       ++   R G
Sbjct: 229 LQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKG 288

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             + A  ++   R  +   S+F YN L+  L+ +    +A  +  E       P   T+N
Sbjct: 289 DLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYN 347

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            +I GL + G+V+ A   F +M + G  PD++TYN+L++G C+   +     L  +++  
Sbjct: 348 AMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHA 407

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--------------------NSC---- 361
              +P V+TY  +I GYC+LG +++A  +  EM                    N+C    
Sbjct: 408 G-LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAM 466

Query: 362 -----------GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
                      G++P    +N  I     +G +  A  +RE M+  G   D VT++ LID
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G C+ G LN    L  +M    L P+  T+T LI+A C+   L +AR+F K +  + L P
Sbjct: 527 GLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAP 586

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y   I  +C+ GN+  A     +M E+  +P+++T+ +LI   C  GR   A   F
Sbjct: 587 SAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHF 646

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           ++ML  G  P+  T   LI    K G   +A R
Sbjct: 647 HEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMR 679



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 176/385 (45%), Gaps = 2/385 (0%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           L+    N  +  +  TYN ++  L + G  ++ QV F  MR+ G  P+       ++   
Sbjct: 330 LQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYC 389

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           +AG    A  L    R   +  +   YN L++   +  + +EA  + +E       PD  
Sbjct: 390 KAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVC 449

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL++G      +  A EFF +M S G  PD   YNT I     +  +A+    L+EV
Sbjct: 450 TYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFR-LREV 508

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                 S D VTY  +I G CK G ++ A  +  +M   G++P  +T+  LI    + G 
Sbjct: 509 MMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGL 568

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A    + M+S G  P  VT++  I  YCR G L        +M  + + PN  T+ +
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 628

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+ALC+  R   A R   ++    LVP  + Y  +IDG CK GN ++A     EM +  
Sbjct: 629 LIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNG 688

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAI 527
             PD +T   L  G   +G M  AI
Sbjct: 689 IHPDYLTHKALFKGF-DEGHMNHAI 712



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 3/244 (1%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +PDV     V+       + D    ++ EM   GI+PS VT+N L+D F K G       
Sbjct: 199 APDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAM 258

Query: 389 MRERMLSFGY--LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + + M + G   LP+ VT + +I G  R G L +  ++ + M+    + + +T+  LI  
Sbjct: 259 LLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASS-FTYNPLITG 317

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           L  +  +  A     +++   ++P    YN +I G  ++G V+ A V   EM     +PD
Sbjct: 318 LLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPD 377

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +T+  L+ G+C  G + EA+ +F  +   G AP  +T N LI    + G   EA R+ +
Sbjct: 378 VITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKE 437

Query: 567 RASE 570
              E
Sbjct: 438 EMVE 441



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 3/238 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN  +R+   +G       + + M  +G   ++      +    + G  + AK L  + 
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y  L++A  ++    EA   FK+       P   T+ + I    R G +
Sbjct: 545 VHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNL 604

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+ +F  M   G  P+ +TYN LI  LCR       +    E+  +    P+  TYT 
Sbjct: 605 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEM-LERGLVPNKYTYTL 663

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERML 394
           +I G CK G  + A   Y EM+  GI P  +T   L  GF + G+M  A EY+   +L
Sbjct: 664 LIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDE-GHMNHAIEYLENAVL 720



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 72/165 (43%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K L+   V+  L     TY  ++ + CE GL    +  F  M SDG  P++     F+ +
Sbjct: 538 KDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHA 597

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             R G   +A G   +     V  +   YN L++AL +      A   F E       P+
Sbjct: 598 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPN 657

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
            +T+ +LI G  + G  + A  F+++M   G  PD +T+  L  G
Sbjct: 658 KYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG 702



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 3/137 (2%)

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM    ++P+V     ++  L    R +D      ++    + P    YN ++D F K G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 487 NVDEANVIVAEMEEK--RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
             D+  +++ EME +   C P+ VT  ++I G   KG + EA  +   M R+       T
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKASSFT 310

Query: 545 VNSLISCLLKGGMPNEA 561
            N LI+ LL  G   +A
Sbjct: 311 YNPLITGLLAKGFVKKA 327


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 212/425 (49%), Gaps = 3/425 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S ++ +L  S+ T N ++ +L     +     V+  M     LP+   +   +     A 
Sbjct: 64  SALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQ 123

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K     G++        T++ F+ N +L  L +     EA+ + +E  R    PD  ++N
Sbjct: 124 KPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYN 183

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI GL +  ++K+A     +M + GC P+ VT  TL+ GLC+   +    ELL+ +K K
Sbjct: 184 TLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK-K 242

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             F  DVV Y ++ISG+C  G +D+   +++EM   GI  + VT++ L+ G  ++G    
Sbjct: 243 KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKE 302

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   M   G  PDVVT++ LIDG C++G+    + L + M  K   P+  T+ +L++
Sbjct: 303 ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS 362

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRC 503
            LCKE  + DA + L+ +           YN ++ G C  G VDEA  +   M   E   
Sbjct: 363 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL 422

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           +P+  TF +LI G C +GR+ +A+ I  KM++ G   + +T N L+   LK G   EA  
Sbjct: 423 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 482

Query: 564 IMQRA 568
           + ++ 
Sbjct: 483 LWKQV 487



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 196/413 (47%), Gaps = 3/413 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++   C  G  D  + +FD M   G   N       V    R G+   A  +L+   
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +      Y  L++ L K   A  A+ +         +P   T+N+L+ GL + G V 
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 371

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--FSPDVVTYT 336
            AF+    M   G   D+VTYNTL+ GLC   +V    +L   + F +E    P+V T+ 
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM-FDNENCLEPNVFTFN 430

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G CK G++ KA  I+ +M   G   + VT+N+L+ G  K G +  A  + +++L  
Sbjct: 431 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 490

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G++P+  T+S LIDG+C+   LN    L  EM+   L+P ++ +  L+ +LCKE  L  A
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 550

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +   +++   +  P    +N +IDG  KAG+      +  +M E   +PD +TF+ LI  
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 610

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
               G + EA S   +M+  G  PD +  +SL+  L   G   E   ++ + +
Sbjct: 611 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMA 663



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 183/349 (52%), Gaps = 1/349 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N L++AL +  N   A  +++    +   P   + + LI+  +   + +  F     +  
Sbjct: 78  NFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLK 137

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G + ++   N ++ GLCR   V     L++E+  KS  SPD+V+Y ++I+G CK  K+ 
Sbjct: 138 RGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKS-VSPDIVSYNTLINGLCKAKKLK 196

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A G+  EM + G  P++VT   L+DG  K G M  A  + E M   G+  DVV + +LI
Sbjct: 197 EAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI 256

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            G+C NG L++G +L DEM GK +S NV T++ L++ LC+  +  +A   L  +  + + 
Sbjct: 257 SGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIH 316

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  +IDG CK G    A  ++  M EK  +P  VT+ +L+ G C +G +++A  I
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI 376

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
              M+  G   D +T N+L+  L   G  +EA ++     +++N   P+
Sbjct: 377 LRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 425



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 188/395 (47%), Gaps = 5/395 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQ 216
           TY  ++  LC+ G       + + M   G  P++      +S   + G   DA K L   
Sbjct: 321 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 380

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQGLSRI 274
              G+       YN+L+  L  +   DEA+ +F   F   +  +P+ +TFN+LI GL + 
Sbjct: 381 IEKGK-KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 439

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + KA +    M   G   ++VTYN L+ G  +  ++    EL K+V     F P+  T
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV-LDLGFVPNSFT 498

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G+CK+  ++ A G++ EM + G+ P+   +N L+    K G++  A+ + + M 
Sbjct: 499 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 558

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +    PD+++F+++IDG  + G      +L  +M    L P+  TF+ LIN L K   L+
Sbjct: 559 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 618

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A+  L+++  +   P   +Y+ ++ G    G+  E   ++ +M  K    D+   + ++
Sbjct: 619 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 678

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
              C   + V+ + +     +       I+ N L+
Sbjct: 679 TCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 713



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 3/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC +G       V + M   G  P+       +    + G+   A  LL+  
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YN LL+ L K+    +A  + +       + D  T+N L++GL   G+V
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405

Query: 278 KKAFEFFYDM-GSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +A + F  M  +  C  P++ T+N LI GLC+   + +  ++ +++  K     ++VTY
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM-VKKGSCGNLVTY 464

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             ++ G  K GK+ +A  ++ ++   G  P++ T+++LIDGF K+  +  A+ +   M +
Sbjct: 465 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 524

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P +  +++L+   C+ G L Q   L  EM   N  P++ +F  +I+   K      
Sbjct: 525 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 584

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
            +    ++    L P    ++ +I+   K G +DEA   +  M      PD + +  L+ 
Sbjct: 585 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 644

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           G   KG   E I++ ++M   G   D   V+++++CL
Sbjct: 645 GLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 681



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%)

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  +++      + PS  T N L+D   +  N   A  +  RM     LP   + S+LI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           + +    +   G  +   +  +  + NV+   I++  LC+   + +A   ++++    + 
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +I+G CKA  + EA  ++ EME   C P+ VT T L+ G C  GRM EA+ +
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 530 FNKMLRIGCAPDDITVNSLIS 550
              M + G   D +   +LIS
Sbjct: 237 LEAMKKKGFDADVVLYGTLIS 257



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 10/174 (5%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            LN +   YN +M SLC+ G  +  + +F  M +    P+       +   ++AG     
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585

Query: 211 KGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K L  +      RP  +T ST     L+N L K    DEA    +        PD   ++
Sbjct: 586 KELQMKMVEMGLRPDALTFST-----LINRLSKLGELDEAKSALERMVASGFTPDALVYD 640

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
            L++GLS  G+  +     + M + G   D    +T+++ LC   +     ELL
Sbjct: 641 SLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/441 (31%), Positives = 232/441 (52%), Gaps = 30/441 (6%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +Y  ++  LC+ G    ++QV+    + DG L  PN  M    + S  +      A  L 
Sbjct: 171 SYGTLINGLCKTGETRAALQVL---RKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLC 227

Query: 215 SQFR-----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           S+       P  VT +T +Y  L+   +K     EAV +F +      +PD +TFNIL+ 
Sbjct: 228 SEMIVKRIFPDVVTYTTLIYGCLIVGRLK-----EAVGLFNQMLLKNIKPDVYTFNILVD 282

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL + GE+KKA      M   G   +IVTYN+L+ G   V +  +   +   +  +   +
Sbjct: 283 GLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA-RRGVT 341

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV +Y+ +I+G CK   +D+A  ++ EM+S  + P+ VT+N LIDG  K G +  A  +
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M + G   DV+T+SSL+D  C+N Q+++ + L  ++K + + PN+YT+TIL++ LCK
Sbjct: 402 VNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCK 461

Query: 450 ENRLNDARRFLKQLKWNDLVPKPF-----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
             RL DA     Q  + DL+ K +     MYN +++G CK G  DEA  +V++ME+  C 
Sbjct: 462 NGRLKDA-----QAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI 516

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA-PDDITVNSLISCLLKGGMPNEAFR 563
           PD VT+  L+       +  +A+ +  +M+  G A   +I+ NS++ C+ +   P  +F 
Sbjct: 517 PDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSML-CVYQAA-PLASFG 574

Query: 564 IMQRASEDQNLQLPSWKKAVP 584
           +        +L L ++K  +P
Sbjct: 575 VFWFIFGLASLGLDAFKIQLP 595



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 199/415 (47%), Gaps = 38/415 (9%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P+ EF   +SS ++      A     Q    ++    F +N L+N      + + A 
Sbjct: 60  PVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAF 119

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  + F+L   PDT T   LI+GL   G+V++A  F  D+ + G   D V+Y TLI+GL
Sbjct: 120 SVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL 179

Query: 307 CRVNE-----------------------------------VARGHELLKEVKFKSEFSPD 331
           C+  E                                   V    +L  E+  K  F PD
Sbjct: 180 CKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIF-PD 238

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VVTYT++I G   +G++ +A G++N+M    IKP   TFN+L+DG  K G M  A  +  
Sbjct: 239 VVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLA 298

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G   ++VT++SL+DGY    Q N+   + + M  + ++P+V +++I+IN LCK  
Sbjct: 299 VMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTK 358

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            +++A    K++    + P    YN +IDG  K G + +A  +V EM  +    D +T++
Sbjct: 359 MVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYS 418

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            L+   C   ++ +AI++  K+   G  P+  T   L+  L K G   +A  + Q
Sbjct: 419 SLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQ 473



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 1/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C +G  +    V   +   G  P++  I   +      GK   A       
Sbjct: 101 TFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDV 160

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +    Y +L+N L K      A+ + ++   L  QP+   +N +I  L +   V
Sbjct: 161 IAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLV 220

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   +M      PD+VTY TLI G   V  +     L  ++  K+   PDV T+  
Sbjct: 221 IHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKN-IKPDVYTFNI 279

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK G+M KA  +   M   G+  + VT+N L+DG+  V     A ++   M   G
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV ++S +I+G C+   +++ + L  EM  K+++PN  T+  LI+ L K  R++DA 
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAW 399

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++           Y+ ++D  CK   VD+A  ++ +++++  +P+  T+TIL+ G 
Sbjct: 400 DLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C  GR+ +A +++  +L  G   D    N +++ L K G+ +EA  ++ +  ++
Sbjct: 460 CKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDN 513



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 74/131 (56%)

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           ++ F  ++++L K N  + A  F KQ++   + P  F +N +I+ FC  G+++ A  ++A
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++ +    PD VT T LI G C+ G++ EA+   + ++  G   D ++  +LI+ L K G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 557 MPNEAFRIMQR 567
               A +++++
Sbjct: 184 ETRAALQVLRK 194


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 203/426 (47%), Gaps = 1/426 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC++G  +  + +F  M   G  P+       +    +    + A  LL + 
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +T + +M  +++N L    +   A  +F+E      +P+   +  +++GL + G  
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M   G SPD+  YNT+I G C+  ++  G   L E+  K    P+V TY +
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG-LKPNVYTYGA 552

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I GYC+ G+M  A   + EM   GI P+ V    LIDG+ K GN   A      ML  G
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDV T S LI G  +NG+L + + +  E+  K L P+V+T+T LI+ LCKE  L  A 
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +    + P    YN +I+G CK G + +A  +   + EK    + VT++ +I G+
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           C    + EA  +F+ M  +G  PD     +LI    K G   +A  +     E+     P
Sbjct: 733 CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP 792

Query: 578 SWKKAV 583
           ++   +
Sbjct: 793 AFNALI 798



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 154/605 (25%), Positives = 242/605 (40%), Gaps = 108/605 (17%)

Query: 63  IAAIAHFHGLANGGSRPFDEKEVNYRC-SNEFWF----------VKVVCTLLLRSSYLSD 111
           +  I HF    NG SR        +   SN F            VK + +LL + ++   
Sbjct: 1   MGTITHFFKNQNGKSRTLISTLRTHSIKSNSFSTNADTNQSDNTVKEITSLLKQKNWQFL 60

Query: 112 TCARYLCEKLSPLNSLEVIKR--LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEM 169
             +  L  KL+P     VIK+  + +PK    F  +       + +  T++++   LC  
Sbjct: 61  IESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNS 120

Query: 170 GLHDSVQVVFDYMRSDGHLPNSPMI----------------------EFFVSSCIRAGKC 207
           GL  +   V + M  D   P+  ++                      E  +    + G  
Sbjct: 121 GLFGNAANVLERM-IDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFL 179

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  +    +  E  +     NSL   L+K N  +    ++K        PD +T+  L
Sbjct: 180 NEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIV-PDVYTYTNL 238

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I    R+G+V++     +DM   GC P++VTY+ +I+GLCR  +V    EL + +  K  
Sbjct: 239 INAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKG- 297

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF---------- 377
             PD   Y ++I G+C+  +  +   + +EM + G+KP  V +  LI+GF          
Sbjct: 298 LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAF 357

Query: 378 -------------------------GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
                                     K+G++  AE +   M   G  PD+ T++ LI+GY
Sbjct: 358 QVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGY 417

Query: 413 -----------------------------------CRNGQLNQGLKLCDEMKGKNLSPNV 437
                                              C  G L +  +L  EM    L PN+
Sbjct: 418 YKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNI 477

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
             +T ++  L KE R  +A + L  +K   L P  F YN VI GFCKAG ++E    + E
Sbjct: 478 VIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVE 537

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K  KP+  T+   I G+C  G M  A   F +ML  G AP+D+    LI    K G 
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGN 597

Query: 558 PNEAF 562
             +AF
Sbjct: 598 TTKAF 602



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 200/443 (45%), Gaps = 35/443 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY   +   C  G   + +  F  M   G  PN  +    +    + G    A       
Sbjct: 549 TYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCM 608

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      ++ L++ L K     EA+ +F E       PD +T+  LI  L + G++
Sbjct: 609 LDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K AFE   DM   G +P+IVTYN LI+GLC++ E+A+  EL   +  K   + + VTY++
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG-LARNSVTYST 727

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKP-------------------------------- 365
           +I+GYCK   + +A  +++ M   G+ P                                
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787

Query: 366 --SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
             S   FN LIDGF K+G ++ A  + E M+     P+ VT++ LI+ +C  G + +  +
Sbjct: 788 IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM+ +N+ PNV T+T L++   +  R ++      ++    + P    ++ ++D   
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K GN  +A  +V +M  +     K  +TILI   C    + E + + +++ + G      
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLA 967

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
           T  +L+ C  + G  +EA R+++
Sbjct: 968 TCGTLVCCFHRAGRTDEALRVLE 990



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 212/493 (43%), Gaps = 53/493 (10%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            +E  + NL+ N        ++  LC  G       +F  M S G  PN  +    V   
Sbjct: 430 LIEIKKENLTANAYM--CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGL 487

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           ++ G+ + A  +L   +   ++   F YN+++    K    +E      E      +P+ 
Sbjct: 488 VKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547

Query: 262 WTFNILIQGLSRIGEVK-----------------------------------KAFEFFYD 286
           +T+   I G  R GE++                                   KAF  F  
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRC 607

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  PD+ T++ LI GL +  ++     +  E+  K    PDV TYTS+IS  CK G
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG-LVPDVFTYTSLISNLCKEG 666

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +  A  ++++M   GI P+ VT+N LI+G  K+G +  A  + + +   G   + VT+S
Sbjct: 667 DLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYS 726

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           ++I GYC++  L +  +L   MK   + P+ + +  LI+  CK      A      +   
Sbjct: 727 TIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEE 786

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            +   P  +N +IDGF K G + EA  +V +M +    P+ VT+TILI  HC  G + EA
Sbjct: 787 GIASTP-AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEA 845

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE--------------DQ 572
             +F +M +    P+ +T  SL+    + G  +E F +                    D 
Sbjct: 846 EQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDA 905

Query: 573 NLQLPSWKKAVPL 585
           +L+  +W KA+ L
Sbjct: 906 HLKEGNWIKALKL 918



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 168/353 (47%), Gaps = 6/353 (1%)

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           KG+L    P       + Y +L+NA  +    +E  ++  +       P+  T++++I G
Sbjct: 222 KGMLGAIVP-----DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAG 276

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L R G+V +A E    M + G  PD   Y TLI G CR      G  +L E+ +     P
Sbjct: 277 LCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEM-YTMGLKP 335

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D V YT++I+G+ K   +  A  +  EM +  IK +  T+  LI G  K+G++  AE + 
Sbjct: 336 DHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLF 395

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             M   G  PD+ T++ LI+GY +   + +  +L  E+K +NL+ N Y    ++N LC  
Sbjct: 396 SEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHC 455

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             L  A    +++    L P   +Y  ++ G  K G  +EA  I+  M+++   PD   +
Sbjct: 456 GDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCY 515

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             +IIG C  G+M E  S   +M+  G  P+  T  + I    + G    A R
Sbjct: 516 NTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 175/392 (44%), Gaps = 37/392 (9%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           F  M   G LP+       +    + GK   A G+ S+     +    F Y SL++ L K
Sbjct: 605 FRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCK 664

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
           + +   A  +  +  +    P+  T+N LI GL ++GE+ KA E F  +   G + + VT
Sbjct: 665 EGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVT 724

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y+T+I+G C+   +    +L   +K      PD   Y ++I G CK G  +KA  ++  M
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGMKLVG-VPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              GI  S   FN LIDGF K+G ++ A  + E M+     P+ VT++ LI+ +C  G +
Sbjct: 784 VEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI 842

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ----------LKWNDL 468
            +  +L  EM+ +N+ PNV T+T L++   +  R ++      +          L W+ +
Sbjct: 843 KEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVM 902

Query: 469 VPKPF-------------------------MYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           V                             +Y  +ID  CK  N+ E   ++ E+E++  
Sbjct: 903 VDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGS 962

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           K    T   L+      GR  EA+ +   M+R
Sbjct: 963 KLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 159/314 (50%), Gaps = 6/314 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N +  TYN ++  LC++G     + +FD +   G   NS      ++   ++     A 
Sbjct: 683 INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAF 742

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR--LYSQPDTWTFNILIQ 269
            L    +   V   +F+Y +L++   K  N ++A+ +F       + S P    FN LI 
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP---AFNALID 799

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  ++G++ +A++   DM     +P+ VTY  LI   C V  +    +L  E++ K    
Sbjct: 800 GFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQ-KRNVM 858

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+V+TYTS++ GY ++G+  +   +++EM + GIKP  + ++V++D   K GN + A  +
Sbjct: 859 PNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKL 918

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + MLS G       ++ LID  C++  L++ LK+ DE++ +    ++ T   L+    +
Sbjct: 919 VDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHR 978

Query: 450 ENRLNDARRFLKQL 463
             R ++A R L+ +
Sbjct: 979 AGRTDEALRVLESM 992


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 197/384 (51%), Gaps = 6/384 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAK-GLLSQF----RPGEVTMSTFMYNSLLNALVKQNNAD 243
           P   + E +  +  R G+ D  + G  SQ     R  E + +   + S L A  K    D
Sbjct: 180 PRGYLQEVWEGAGRRGGRPDDERSGHGSQHSVLQRAVEGSAARGRHGSALEAYCKVREFD 239

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A  +  E        +T T+N+LI GL R G V++AF F  DM  +G  PD  TY  LI
Sbjct: 240 TAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 299

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           +GLC+         LL E+   +E  P+VV Y ++I G+ + G  D+A  +  EM + G+
Sbjct: 300 NGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 358

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P+ +T++ L+ G  K+G M  A  + ++M+   + PD +T++ +I+G+ R+       +
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 418

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM+   +SPNVYT++I+I+ LC+      A   L+++    L P  F+Y P+I G+C
Sbjct: 419 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 478

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           + GNV  A  I  +M +    PD   +  LI G    GR+ E+   F +M   G  P++ 
Sbjct: 479 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 538

Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
           T + LI   LK G    A +++QR
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQR 562



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 199/440 (45%), Gaps = 36/440 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+    +  + + D M      PN  +    +   +R G  D A  ++ + 
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y++L+  L K    D A  + K+  R   +PDT T+N++I+G  R    
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 413

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K AF    +M + G SP++ TY+ +I GLC+  E  +  +LL+E+  K    P+   Y  
Sbjct: 414 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG-LKPNAFVYAP 472

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGYC+ G +  A  I+++M    + P    +N LI G  KVG +  +     +M   G
Sbjct: 473 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN--VYT---------------- 439
            LP+  T+S LI GY +NG L    +L   M    L PN  +Y                 
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592

Query: 440 -----------------FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                            + ILI+ L     +  A R L  ++ N  VP   +Y+ +I G 
Sbjct: 593 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK  + ++A  I+ EM +K   P+ V +  LI G C  G +  A ++FN +L  G  P+ 
Sbjct: 653 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712

Query: 543 ITVNSLISCLLKGGMPNEAF 562
           +T  SLI    K G  + AF
Sbjct: 713 VTYTSLIDGSCKVGDISNAF 732



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 195/404 (48%), Gaps = 1/404 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
            + + C++   D+ + V   MR  G   N+      ++   R+G  + A G         
Sbjct: 228 ALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 287

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +    F Y +L+N L K   ++EA  +  E      +P+   +  LI G  R G   +AF
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +   +M + G  P+ +TY+ L+ GLC++ ++ R   LLK++  +    PD +TY  +I G
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM-VRDSHRPDTITYNLIIEG 406

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           + +      A  + +EM + GI P+  T++++I G  + G    A  + E M + G  P+
Sbjct: 407 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 466

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
              ++ LI GYCR G ++   ++ D+M   N+ P++Y +  LI  L K  R+ ++ ++  
Sbjct: 467 AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFA 526

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q++   L+P  F Y+ +I G+ K G+++ A  +V  M +   KP+ V +  L+  +    
Sbjct: 527 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSD 586

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            + +  S F  ML  G   D+     LI  L   G    AFR++
Sbjct: 587 DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 630



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 213/416 (51%), Gaps = 7/416 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           TYN+++  LC  G   +V+  F +   M   G +P+       ++   ++ + + AK LL
Sbjct: 259 TYNVLIAGLCRSG---AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 315

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    E+  +  +Y +L++  +++ NADEA  M KE      QP+  T++ L++GL ++
Sbjct: 316 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 375

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++ +A      M      PD +TYN +I G  R +       LL E++  +  SP+V T
Sbjct: 376 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEME-NAGISPNVYT 434

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G C+ G+ +KA+ +  EM + G+KP+A  +  LI G+ + GN+  A  + ++M 
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
               LPD+  ++SLI G  + G++ +  K   +M+ + L PN +T++ LI+   K   L 
Sbjct: 495 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 554

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + ++++    L P   +Y  +++ + K+ ++++ +     M ++    D   + ILI
Sbjct: 555 SAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 614

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                 G M  A  + + + + G  PD    +SLIS L K     +AF I+   S+
Sbjct: 615 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 670



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 201/486 (41%), Gaps = 74/486 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++R LC+MG  D   ++   M  D H P++      +    R      A  LLS+ 
Sbjct: 364 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 423

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ + + Y+ +++ L +    ++A  + +E      +P+ + +  LI G  R G V
Sbjct: 424 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 483

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M      PD+  YN+LI GL +V  V    +   +++ +    P+  TY+ 
Sbjct: 484 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG-LLPNEFTYSG 542

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF--------------------------- 370
           +I GY K G ++ A  +   M   G+KP+ V +                           
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 602

Query: 371 --------NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                    +LI      GNM +A  +   +   G +PDV  +SSLI G C+     +  
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 662

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + DEM  K + PN+  +  LI+ LCK   ++ AR     +    LVP    Y  +IDG 
Sbjct: 663 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 722

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTI------------------------------ 512
           CK G++  A  +  EM      PD   +++                              
Sbjct: 723 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 782

Query: 513 ----LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---- 564
               L+ G C +G+M E + + + ++  G  P+ +T+ ++IS L + G  +E   I    
Sbjct: 783 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 842

Query: 565 MQRASE 570
            Q+ SE
Sbjct: 843 QQKTSE 848



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 202/439 (46%), Gaps = 28/439 (6%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  L ++G  +     F  M+  G LPN       +   ++ G  ++A+ L+ +  
Sbjct: 505 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 564

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +  +Y  LL +  K ++ ++    FK         D   + ILI  LS  G ++
Sbjct: 565 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 624

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            AF     +   G  PD+  Y++LISGLC+  +  +   +L E+  K    P++V Y ++
Sbjct: 625 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS-KKGVDPNIVCYNAL 683

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G +  A  ++N + + G+ P+ VT+  LIDG  KVG++ +A Y+   ML+ G 
Sbjct: 684 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 743

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD   +S L  G    G L Q + L +EM  +    ++ +F  L++  CK  ++ +  +
Sbjct: 744 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLK 802

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL----- 513
            L  +    LVP       +I G  +AG + E + I  E+++K  +     F+ L     
Sbjct: 803 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 862

Query: 514 -------------IIGHCMKGRMVEAI----SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
                        I  HC +G + +A+     I  K   +GC+    +  +++  L + G
Sbjct: 863 NQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCS----SYLAIVDNLCRKG 918

Query: 557 MPNEAFRIMQRASEDQNLQ 575
             +EA  +++   +  NLQ
Sbjct: 919 KLSEALNLLKEMDKRGNLQ 937



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/335 (22%), Positives = 156/335 (46%), Gaps = 25/335 (7%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + Y +++ +L   G  ++   V   +  +G +P+  +    +S   +    + A G+L +
Sbjct: 608 RIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDE 667

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +   YN+L++ L K  +   A  +F         P+  T+  LI G  ++G+
Sbjct: 668 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGD 727

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  AF  + +M + G +PD   Y+ L +G     ++ +   L++E+  +   S  + ++ 
Sbjct: 728 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS--ISSFN 785

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM------------- 383
           +++ G+CK GKM +   + + +   G+ P+A+T   +I G  + G +             
Sbjct: 786 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 845

Query: 384 VSAEYMRE------RMLSFGYLP-DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
            S    R        M++ G +P DVV    +I  +C+ G L++ L L D +  K+    
Sbjct: 846 TSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAPMG 903

Query: 437 VYTFTILINALCKENRLNDARRFLKQL-KWNDLVP 470
             ++  +++ LC++ +L++A   LK++ K  +L P
Sbjct: 904 CSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 938



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 85/167 (50%)

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           S ++ YC+  + +   K+  EM+ +    N  T+ +LI  LC+   + +A  F K ++  
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 286

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            LVP  F Y  +I+G CK+   +EA  ++ EM     KP+ V +  LI G   +G   EA
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 346

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
             +  +M+  G  P+ IT ++L+  L K G  + A  ++++   D +
Sbjct: 347 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 393



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 45/95 (47%)

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           +   ++ +CK    D A  ++ EM E+ C  + VT+ +LI G C  G + EA      M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
             G  PD  T  +LI+ L K    NEA  ++   S
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 319


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 218/413 (52%), Gaps = 10/413 (2%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHLPNSPMIEFF 197
           +F   S++ + L+    ++ +V++  CE G    ++  FD +   R  G  PN  +    
Sbjct: 150 RFFNESKIKVDLD--VYSFGIVIKGCCEAG---EIEKSFDLLVELREFGFSPNVVIYTTL 204

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +  C + G+ + AK L  +     +  + + Y  L++ L K     +   M+++      
Sbjct: 205 IDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGV 264

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P+ +T+N ++    + G  K AF+ F +M   G S +IVTYNTLI GLCR  +    ++
Sbjct: 265 FPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANK 324

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           ++ ++K     +P+++TY ++I G+C +GK+ KA  +  ++ S G+ PS VT+N+L+ GF
Sbjct: 325 VMDQMK-SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G+   A  + + M   G  P  +T++ LID + R   + + ++L   M+   L+P+V
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDV 443

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           +T+++LI+  C + ++N+A R  K +    L P   +YN ++ G+CK G+   A  +  E
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE 503

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           MEEK   P+  ++  +I   C + +  EA  +  KM+  G  P D  +N LIS
Sbjct: 504 MEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILN-LIS 555



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 212/416 (50%), Gaps = 35/416 (8%)

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           S + E  +++ +++   D++    ++         +  +N+LL  +V  ++ ++    F 
Sbjct: 94  SRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN 153

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E  ++    D ++F I+I+G    GE++K+F+   ++  FG SP++V Y TLI G C+  
Sbjct: 154 ES-KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 311 EVARGHELLKEV-KF----------------------KSEFS-----------PDVVTYT 336
           E+ +  +L  E+ KF                      K  F            P++ TY 
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            V++ +CK G+   A  +++EM   G+  + VT+N LI G  +      A  + ++M S 
Sbjct: 273 CVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSD 332

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+++T+++LIDG+C  G+L + L LC ++K + LSP++ T+ IL++  CK+   + A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + +K+++   + P    Y  +ID F +  N+++A  + + MEE    PD  T+++LI G
Sbjct: 393 GKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHG 452

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            C+KG+M EA  +F  M+     P+ +  N+++    K G    A R+ +   E +
Sbjct: 453 FCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 194/370 (52%), Gaps = 1/370 (0%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +  C  AG+ + +  LL + R    + +  +Y +L++   K+   ++A  +F E  +   
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGL 229

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
             + WT+ +LI GL + G  K+ FE +  M   G  P++ TYN +++  C+        +
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFK 289

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E++ +   S ++VTY ++I G C+  K ++A  + ++M S GI P+ +T+N LIDGF
Sbjct: 290 LFDEMRERG-VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGF 348

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             VG +  A  +   + S G  P +VT++ L+ G+C+ G  +   K+  EM+ + + P+ 
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+TILI+   + + +  A +    ++   L P    Y+ +I GFC  G ++EA+ +   
Sbjct: 409 ITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKL 468

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K+ +P+KV +  +++G+C +G    A+ +F +M      P+  +   +I  L K   
Sbjct: 469 MVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 558 PNEAFRIMQR 567
             EA  ++++
Sbjct: 529 SKEAEGLVEK 538


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 179/332 (53%), Gaps = 1/332 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           + + +N L+N L K+    +A  +F E  +   QP   +FN LI G  + G +++ F   
Sbjct: 231 NVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLK 290

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M  F   PD+ TY+ LI GLC+  ++   + L KE+  +    P+ VT+T++I+G CK
Sbjct: 291 MVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG-LVPNDVTFTTLINGQCK 349

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M + G+K   V +N LIDG  K G    A      M   G +PD  T
Sbjct: 350 NGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFT 409

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++L+DG C+ G L   L++  EM  + +  +   FT +I+ LC++ ++ DA R L+++ 
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              L P    Y  V+DGFCK G+V     ++ EM+     P  +T+ +L+ G C +G++ 
Sbjct: 470 RAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVK 529

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            A  + N ML +G  PDDIT N L+    K G
Sbjct: 530 NADMLLNAMLNLGVVPDDITYNILLQGHCKHG 561



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 220/443 (49%), Gaps = 27/443 (6%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           PK  L F +F     + +H+ ++Y  ++  L    ++   +                ++ 
Sbjct: 90  PKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAE---------------SLLH 134

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           F VS   R GK  A+    S         S+F++++L++   +     +A+    + FRL
Sbjct: 135 FVVS---RKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAI----QCFRL 187

Query: 256 YSQPD-TWTFN---ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
             + +    FN    L++ + ++     A EF+ ++   G  P++ T+N L++ LC+  +
Sbjct: 188 TKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGK 247

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           V     +  E++ K+   P  V++ ++I+GYCK G +++   +   M    + P   T++
Sbjct: 248 VKDAQLIFDEIR-KTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYS 306

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            LIDG  K   +  A ++ + M   G +P+ VTF++LI+G C+NG+++  L++  +M  K
Sbjct: 307 ALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTK 366

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
            L  ++  +  LI+ LCK     +AR+F+ ++    L+P  F Y  ++DG CK G+++ A
Sbjct: 367 GLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELA 426

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             +  EM ++  + D V FT +I G C  G++V+A     +MLR G  PDD T   ++  
Sbjct: 427 LEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDG 486

Query: 552 LLKGGMPNEAFRIMQRASEDQNL 574
             K G     F++++    D ++
Sbjct: 487 FCKKGDVKMGFKLLKEMQSDGHI 509



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 189/372 (50%), Gaps = 8/372 (2%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G+ PN       ++   + GK   A+ +  + R   +  +   +N+L+N   K  N +E 
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 246 --VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
             + M  E FR++  PD +T++ LI GL +  +++ A   F +M   G  P+ VT+ TLI
Sbjct: 287 FRLKMVMEEFRVF--PDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLI 344

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           +G C+   V    E+ +++ F      D+V Y ++I G CK G   +A     EM   G+
Sbjct: 345 NGQCKNGRVDLALEIYQQM-FTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGL 403

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   T+  L+DG  K G++  A  MR+ M+  G   D V F+++I G CR+G++    +
Sbjct: 404 IPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAER 463

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
              EM    L P+  T+T++++  CK+  +    + LK+++ +  +P    YN +++G C
Sbjct: 464 TLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLC 523

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G V  A++++  M      PD +T+ IL+ GHC  G++ +  ++  +M   G   D  
Sbjct: 524 KQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYA 580

Query: 544 TVNSLISCLLKG 555
           +  SL+  L K 
Sbjct: 581 SYRSLLHELSKA 592



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 1/200 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+ G     +     M   G +P+       +    + G  + A  +  +  
Sbjct: 375 YNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMV 434

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + +    + ++++ L +     +A    +E  R   +PD  T+ +++ G  + G+VK
Sbjct: 435 KEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVK 494

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
             F+   +M S G  P ++TYN L++GLC+  +V     LL  +       PD +TY  +
Sbjct: 495 MGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAM-LNLGVVPDDITYNIL 553

Query: 339 ISGYCKLGKMDKATGIYNEM 358
           + G+CK GK+     +  EM
Sbjct: 554 LQGHCKHGKLGDFQNVKTEM 573


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 210/417 (50%), Gaps = 1/417 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   ++ ++ ++ +M  +D V  +++ M+  G   N       ++   R  +   A   L
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +        S   + SLLN   + +   +A+YMF +   +  +P+   +N +I GL + 
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +V  A +    M   G  PD+VTYN+LISGLC     +    ++  +  K E  PDV T
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT-KREIYPDVFT 258

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           + ++I    K G++ +A   Y EM    + P  VT+++LI G      +  AE M   M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G  PDVVT+S LI+GYC++ ++  G+KL  EM  + +  N  T+TILI   C+  +LN
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    +++ +  + P    YN ++ G C  G +++A VI+A+M++     D VT+ I+I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G C  G + +A  I+  +   G  PD  T  +++  L K G+  EA  + ++  ED
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 2/376 (0%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           R     L L FL    + L    S  T+  ++   C          +FD M   G+ PN 
Sbjct: 128 RCSQLSLALSFLG-KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
            +    +    ++ + D A  LL++     +      YNSL++ L       +A  M   
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
             +    PD +TFN LI    + G V +A EF+ +M      PDIVTY+ LI GLC  + 
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +    E+   +  K  F PDVVTY+ +I+GYCK  K++    ++ EM+  G+  + VT+ 
Sbjct: 307 LDEAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           +LI G+ + G +  AE +  RM+  G  P+++T++ L+ G C NG++ + L +  +M+  
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
            +  ++ T+ I+I  +CK   + DA      L    L+P  + Y  ++ G  K G   EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485

Query: 492 NVIVAEMEEKRCKPDK 507
           + +  +M+E    P++
Sbjct: 486 DALFRKMKEDGILPNE 501



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 35/256 (13%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P +  ++ ++S   K+ K D    ++ +M   GI  +  T N+L++ F +   +  A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             +M+  G+ P +VTF SL++G+CR  ++   L + D+M G    PNV  +  +I+ LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 450 ENRLNDARRFLKQL-----------------------KWND------------LVPKPFM 474
             ++++A   L ++                       +W+D            + P  F 
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           +N +ID   K G V EA     EM  +   PD VT+++LI G CM  R+ EA  +F  M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 535 RIGCAPDDITVNSLIS 550
             GC PD +T + LI+
Sbjct: 319 SKGCFPDVVTYSILIN 334



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 3/243 (1%)

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  ++    +  K+D +  ++  M  C   PS   F+ L+    K+       Y+ E+M 
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   ++ T + L++ +CR  QL+  L    +M      P++ TF  L+N  C+ +R+ 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA     Q+      P   +YN +IDG CK+  VD A  ++  ME+    PD VT+  LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASED 571
            G C  GR  +A  + + M +    PD  T N+LI   +K G  +EA   +  M R S D
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 572 QNL 574
            ++
Sbjct: 289 PDI 291


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 201/415 (48%), Gaps = 1/415 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L ++H   TY++ +   C          V   M   G+ P+   +   ++    + +   
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  L+ Q         TF + +L++ L   N A EAV +  +  +   QPD  T+  ++ 
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL + G++  A      M +     ++V +NT+I  LC+   V    +L  E++ K    
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG-IR 290

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+VVTY S+I+  C  G+   A+ + + M    I P+ VTFN LID F K G +V AE +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E M+     PD +T++ LI+G+C + +L++  ++   M  K+  PN+ T+  LIN  CK
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R+ D     +++    LV     Y  +I GF +AG+ D A ++  +M   R   D +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ++IL+ G C  G++  A+ IF  + +     +    N++I  + K G   EA+ +
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 215/428 (50%), Gaps = 14/428 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N ++ ++ +M   + V  + + M++ G   +      F++   R  +   A  +L
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           ++     + P  VT+S     SLLN         +AV +  +   +  +PDT+TF  LI 
Sbjct: 142 AKMMKLGYEPDIVTLS-----SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL    +  +A      M   GC PD+VTY T+++GLC+  ++     LL +++  +   
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME-AARIK 255

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            +VV + ++I   CK   ++ A  ++ EM + GI+P+ VT+N LI+     G    A  +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              ML     P+VVTF++LID + + G+L +  KL +EM  +++ P+  T+ +LIN  C 
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            NRL++A++  K +   D +P    YN +I+GFCK   V++   +  EM ++    + VT
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
           +T +I G    G    A  +F +M+      D +T + L+  L   G  + A   F+ +Q
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495

Query: 567 RASEDQNL 574
           ++  + N+
Sbjct: 496 KSEMELNI 503



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 191/388 (49%), Gaps = 6/388 (1%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           + D+V +  D ++S    P   ++EF   +S+  +  K +    L  Q +   ++   + 
Sbjct: 64  VDDAVDLFGDMVKSR---PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y+  +N   +++    A+ +  +  +L  +PD  T + L+ G      +  A      M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD  T+ TLI GL   N+ +    L+ ++  +    PD+VTY +V++G CK G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D A  + N+M +  IK + V FN +ID   K  ++  A  +   M + G  P+VVT++SL
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+  C  G+ +   +L   M  K ++PNV TF  LI+A  KE +L +A +  +++    +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I+GFC    +DEA  +   M  K C P+  T+  LI G C   R+ + + 
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +F +M + G   + +T  ++I    + G
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAG 447



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 176/365 (48%), Gaps = 1/365 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L           S   +N LL+A+ K N  +  + + ++   L    D +T++
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           I I    R  ++  A      M   G  PDIVT ++L++G C    ++    L+ ++  +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VE 181

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             + PD  T+T++I G     K  +A  + ++M   G +P  VT+  +++G  K G++  
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +  +M +     +VV F+++ID  C+   +   + L  EM+ K + PNV T+  LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC   R +DA R L  +    + P    +N +ID F K G + EA  +  EM ++   P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D +T+ +LI G CM  R+ EA  +F  M+   C P+  T N+LI+   K     +   + 
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421

Query: 566 QRASE 570
           +  S+
Sbjct: 422 REMSQ 426



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 189/405 (46%), Gaps = 5/405 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+ G  D    + + M +     N  +    + S  +    + A  L ++ 
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YNSL+N L       +A  +          P+  TFN LI    + G++
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M      PD +TYN LI+G C  N +    ++ K +  K +  P++ TY +
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK-DCLPNIQTYNT 403

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+CK  +++    ++ EM+  G+  + VT+  +I GF + G+  SA+ + ++M+S  
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D++T+S L+ G C  G+L+  L +   ++   +  N++ +  +I  +CK  ++ +A 
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I G C    + EA+ +  +M+E    P+  T+  LI  +
Sbjct: 524 DLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
                   +  +  +M   G   D  T+ SL++ +L  G  +++F
Sbjct: 581 LRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 135/338 (39%), Gaps = 36/338 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G       +   M      PN       + +  + GK   A+ L  + 
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +   T  YN L+N     N  DEA  MFK        P+  T+N LI G  +   V
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   E F +M   G   + VTY T+I G  +  +      + K++   +    D++TY+ 
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSI 473

Query: 338 VISGYCKLGKMDKATGIYN-------EMN-------------------------SCGIKP 365
           ++ G C  GK+D A  I+        E+N                         S  IKP
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP 533

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             VT+N +I G      +  A+ +  +M   G LP+  T+++LI    R+       +L 
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            EM+      +  T +++ N L  + RL+  + FL  L
Sbjct: 594 KEMRSSGFVGDASTISLVTNML-HDGRLD--KSFLNML 628



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 52/109 (47%)

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           IL N L    +++DA      +  +   P    +N ++    K    +    +  +M+  
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
               D  T++I I   C + ++  A+++  KM+++G  PD +T++SL++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 208/415 (50%), Gaps = 8/415 (1%)

Query: 158 TYNLVMRSLCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N  +  LC+M  +H++ ++V D M   G  PNS      +    R GK D A+ LL++
Sbjct: 307 TFNDAIHGLCKMLRIHEAAKLV-DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK 365

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEA-VYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                V +    +N+L+N  V +   DEA   M +    +   PD +T+N LI GL + G
Sbjct: 366 VPNPNVVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 421

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A E   +M   GC P+++TY  LI   C+   +     +L E+  K   + + V Y
Sbjct: 422 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGY 480

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +IS  CK  K+  A  ++ +M+S G KP   TFN LI G  KV     A  + + ML 
Sbjct: 481 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 540

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G + + +T+++LI  + R G + + LKL ++M  +    +  T+  LI ALC+   +  
Sbjct: 541 EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 600

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
                + +    L P     N +I+G C+ GN+  A   + +M  +   PD VT+  LI 
Sbjct: 601 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 660

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G C  GR  EA+++F+K+   G  PD IT N+LIS   K GM ++A  ++ R  +
Sbjct: 661 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 715



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 205/422 (48%), Gaps = 6/422 (1%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           P    + L   R   S   +F++YN+V+  L        V  VF  M S G  P      
Sbjct: 180 PGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFG 239

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + +     + D+A  LL          +  +Y +L++AL K    +E + + +E   +
Sbjct: 240 VVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLM 299

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              PD  TFN  I GL ++  + +A +    M   G +P+  TY  L+ GLCR+ +V   
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE-MNSCGIKPSAVTFNVLI 374
             LL +V      +P+VV + ++I+GY   G++D+A  + +E M S G  P   T+N LI
Sbjct: 360 RMLLNKVP-----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLI 414

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G  K G +VSA  +   M   G  P+V+T++ LID +C+ G+L +   + DEM GK L+
Sbjct: 415 LGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLA 474

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
            N   +  LI+ALCK+ ++ DA      +      P  F +N +I G CK    +EA  +
Sbjct: 475 LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGL 534

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +M  +    + +T+  LI     +G M EA+ + N ML  GC  DDIT N LI  L +
Sbjct: 535 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594

Query: 555 GG 556
            G
Sbjct: 595 AG 596



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 195/409 (47%), Gaps = 4/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +VM++LC +   DS   +   M   G +PN+ + +  + +  + G+ +    LL + 
Sbjct: 237 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEM 296

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +N  ++ L K     EA  +          P+++T+ +L+ GL R+G+V
Sbjct: 297 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 356

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      + +    P++V +NTLI+G      +     ++ E        PD+ TY +
Sbjct: 357 DEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 412

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G +  A  + NEM   G +P+ +T+ +LID F K G +  A  + + M   G
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + V ++ LI   C++ ++   L +  +M  K   P+++TF  LI  LCK N+  +A 
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +    ++     YN +I  F + G + EA  +V +M  + C  D +T+  LI   
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C  G + + +++F  M+  G  P++I+ N LI+ L + G    A   ++
Sbjct: 593 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 641



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 184/357 (51%), Gaps = 6/357 (1%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           RLD  K     +  S +++       TYN ++  LC+ G   S + + + M+  G  PN 
Sbjct: 386 RLDEAK---AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 442

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +    + G+ + A+ +L +     + ++   YN L++AL K     +A+ MF +
Sbjct: 443 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 502

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                 +PD +TFN LI GL ++ + ++A   + DM   G   + +TYNTLI    R   
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +    +L+ ++ F+     D +TY  +I   C+ G ++K   ++ +M S G+ P+ ++ N
Sbjct: 563 MQEALKLVNDMLFRG-CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 621

Query: 372 VLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           +LI+G  + GN+  A E++R+ M+  G  PD+VT++SLI+G C+ G+  + L L D+++ 
Sbjct: 622 ILINGLCRTGNIQHALEFLRD-MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 680

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           + + P+  T+  LI+  CKE   +DA   L +   +  +P    +  ++  F K G+
Sbjct: 681 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 154/310 (49%), Gaps = 11/310 (3%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           F ++++   R G   +A     DM G + C P   +YN ++  L   N       +  E+
Sbjct: 167 FILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM 226

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K   SP V T+  V+   C + ++D A  +  +M   G  P+A+ +  LI    KVG 
Sbjct: 227 LSKG-ISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +     + E ML  G +PDV TF+  I G C+  ++++  KL D M  +  +PN +T+ +
Sbjct: 286 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKP--FMYNPVIDGFCKAGNVDEANVIVAE-ME 499
           L++ LC+  ++++AR  L +      VP P   ++N +I+G+   G +DEA  ++ E M 
Sbjct: 346 LMHGLCRMGKVDEARMLLNK------VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESML 399

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
              C PD  T+  LI+G C KG +V A  + N+M   GC P+ IT   LI    K G   
Sbjct: 400 SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 459

Query: 560 EAFRIMQRAS 569
           EA  ++   S
Sbjct: 460 EARNVLDEMS 469


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 212/422 (50%), Gaps = 14/422 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   ++ ++ ++ +M   D V  + + M++ G   N       ++   R  +   A  +L
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVL 139

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            +     + P  VT+S     SLLN         EAV +  + F    QP+T TFN LI 
Sbjct: 140 GKMMKLGYEPNIVTLS-----SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL    +  +A      M + GC PD+VTY  +++GLC+  +      LL +++ + +  
Sbjct: 195 GLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKME-QGKLE 253

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V+ YT++I G CK   MD A  ++ EM + GI+P+ VT++ LI      G    A  +
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+     PDV TFS+LID + + G+L +  KL DEM  +++ P++ T++ LIN  C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +RL++A++  + +      P    Y+ +I GFCKA  VDE   +  EM ++    + VT
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
           +T LI G    G    A  IF +M+  G  P+ +T N+L+  L K G   +A   F  +Q
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493

Query: 567 RA 568
           R+
Sbjct: 494 RS 495



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 219/461 (47%), Gaps = 36/461 (7%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL + H+  TY++++   C          V   M   G+ PN   +   ++    + +  
Sbjct: 109 NLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q        +T  +N+L++ L   N A EAV +         QPD  T+ +++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVV 228

Query: 269 QGLSRIGEVKKAF-----------------------------------EFFYDMGSFGCS 293
            GL + G+   AF                                     F +M + G  
Sbjct: 229 NGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIR 288

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P++VTY++LIS LC     +    LL ++  + + +PDV T++++I  + K GK+ +A  
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEGKLVEAEK 347

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +Y+EM    I PS VT++ LI+GF     +  A+ M E M+S    PDVV++S+LI G+C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFC 407

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           +  ++++G++L  EM  + L  N  T+T LI  L +    + A+   K++  + + P   
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN ++DG CK G +++A V+   ++  + +P   T+ I+I G C  G++ +   +F  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
              G  PD +  N++IS   + G   EA  + +   ED  L
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 202/405 (49%), Gaps = 2/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +V+  LC+ G  D   ++ + M      P   +    +    +    D A  L  + 
Sbjct: 223 TYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEM 282

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y+SL++ L       +A  +  +       PD +TF+ LI    + G++
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + + +M      P IVTY++LI+G C  + +    ++ + +  K  F PDVV+Y++
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVSYST 401

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK  ++D+   ++ EM+  G+  + VT+  LI G  + G+   A+ + + M+S G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++T+++L+DG C+NG+L + + + + ++   + P +YT+ I+I  +CK  ++ D  
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I GFC+ G+ +EA+ +  EM+E    P+   +  LI   
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              G    +  +  +M   G A D  T+  L++ +L  G  +++F
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 204/405 (50%), Gaps = 9/405 (2%)

Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           L E+ L D+V +  + ++S    P   +IEF   +S+  +  K D    L  Q +   + 
Sbjct: 57  LSELKLDDAVALFGEMVKSR---PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
            + + Y+ L+N   +++    A+ +  +  +L  +P+  T + L+ G      + +A   
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G  P+ VT+NTLI GL   N+ +    L+  +  K    PD+VTY  V++G C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG-CQPDLVTYGVVVNGLC 232

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G  D A  + N+M    ++P  + +  +IDG  K  +M  A  + + M + G  P+VV
Sbjct: 233 KRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVV 292

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+SSLI   C  G+ +   +L  +M  + ++P+V+TF+ LI+A  KE +L +A +   ++
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    Y+ +I+GFC    +DEA  +   M  K C PD V+++ LI G C   R+
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV 412

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIM 565
            E + +F +M + G   + +T  +LI  L + G   M  E F+ M
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM 457



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 183/365 (50%), Gaps = 1/365 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L  +        S   ++ LL+A+ K N  D  + + ++   L    + +T++
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ILI    R  ++  A      M   G  P+IVT ++L++G C    ++    L+ ++ F 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM-FV 179

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           + + P+ VT+ ++I G     K  +A  + + M + G +P  VT+ V+++G  K G+   
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +  +M      P V+ ++++IDG C+N  ++  L L  EM+ K + PNV T++ LI+
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC   R +DA R L  +    + P  F ++ +ID F K G + EA  +  EM ++   P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             VT++ LI G CM  R+ EA  +F  M+   C PD ++ ++LI    K    +E   + 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 566 QRASE 570
           +  S+
Sbjct: 420 REMSQ 424



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 82/158 (51%), Gaps = 4/158 (2%)

Query: 414 RNG----QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           RNG    +L+  + L  EM      P++  F+ L++A+ K N+ +      +Q++   + 
Sbjct: 54  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
              + Y+ +I+ FC+   +  A  ++ +M +   +P+ VT + L+ G+C   R+ EA+++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ++M   G  P+ +T N+LI  L      +EA  ++ R
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDR 211


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 208/415 (50%), Gaps = 8/415 (1%)

Query: 158 TYNLVMRSLCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N  +  LC+M  +H++ ++V D M   G  PNS      +    R GK D A+ LL++
Sbjct: 289 TFNDAIHGLCKMLRIHEAAKLV-DRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNK 347

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEA-VYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                V +    +N+L+N  V +   DEA   M +    +   PD +T+N LI GL + G
Sbjct: 348 VPNPNVVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKG 403

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A E   +M   GC P+++TY  LI   C+   +     +L E+  K   + + V Y
Sbjct: 404 YLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGY 462

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +IS  CK  K+  A  ++ +M+S G KP   TFN LI G  KV     A  + + ML 
Sbjct: 463 NCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLL 522

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G + + +T+++LI  + R G + + LKL ++M  +    +  T+  LI ALC+   +  
Sbjct: 523 EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEK 582

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
                + +    L P     N +I+G C+ GN+  A   + +M  +   PD VT+  LI 
Sbjct: 583 GLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLIN 642

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G C  GR  EA+++F+K+   G  PD IT N+LIS   K GM ++A  ++ R  +
Sbjct: 643 GLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 697



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 200/403 (49%), Gaps = 6/403 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +F++YN+V+  L        V  VF  M S G  P        + +     + D+A  LL
Sbjct: 181 TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALL 240

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                     +  +Y +L++AL K    +E + + +E   +   PD  TFN  I GL ++
Sbjct: 241 KDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKM 300

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             + +A +    M   G +P+  TY  L+ GLCR+ +V     LL +V      +P+VV 
Sbjct: 301 LRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP-----NPNVVL 355

Query: 335 YTSVISGYCKLGKMDKATGIYNE-MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           + ++I+GY   G++D+A  + +E M S G  P   T+N LI G  K G +VSA  +   M
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P+V+T++ LID +C+ G+L +   + DEM GK L+ N   +  LI+ALCK+ ++
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA      +      P  F +N +I G CK    +EA  +  +M  +    + +T+  L
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           I     +G M EA+ + N ML  GC  DDIT N LI  L + G
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 578



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 195/409 (47%), Gaps = 4/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +VM++LC +   DS   +   M   G +PN+ + +  + +  + G+ +    LL + 
Sbjct: 219 TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEM 278

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +N  ++ L K     EA  +          P+++T+ +L+ GL R+G+V
Sbjct: 279 LLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKV 338

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      + +    P++V +NTLI+G      +     ++ E        PD+ TY +
Sbjct: 339 DEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 394

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G +  A  + NEM   G +P+ +T+ +LID F K G +  A  + + M   G
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + V ++ LI   C++ ++   L +  +M  K   P+++TF  LI  LCK N+  +A 
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +    ++     YN +I  F + G + EA  +V +M  + C  D +T+  LI   
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C  G + + +++F  M+  G  P++I+ N LI+ L + G    A   ++
Sbjct: 575 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLR 623



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 185/358 (51%), Gaps = 8/358 (2%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           RLD  K     +  S +++       TYN ++  LC+ G   S + + + M+  G  PN 
Sbjct: 368 RLDEAK---AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 424

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +    + G+ + A+ +L +     + ++   YN L++AL K     +A+ MF +
Sbjct: 425 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 484

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                 +PD +TFN LI GL ++ + ++A   + DM   G   + +TYNTLI    R   
Sbjct: 485 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544

Query: 312 VARGHELLKEVKFKSEFSP-DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           +    +L+ ++ F+    P D +TY  +I   C+ G ++K   ++ +M S G+ P+ ++ 
Sbjct: 545 MQEALKLVNDMLFRG--CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 602

Query: 371 NVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           N+LI+G  + GN+  A E++R+ M+  G  PD+VT++SLI+G C+ G+  + L L D+++
Sbjct: 603 NILINGLCRTGNIQHALEFLRD-MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 661

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
            + + P+  T+  LI+  CKE   +DA   L +   +  +P    +  ++  F K G+
Sbjct: 662 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 154/310 (49%), Gaps = 11/310 (3%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           F ++++   R G   +A     DM G + C P   +YN ++  L   N       +  E+
Sbjct: 149 FILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEM 208

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K   SP V T+  V+   C + ++D A  +  +M   G  P+A+ +  LI    KVG 
Sbjct: 209 LSKG-ISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +     + E ML  G +PDV TF+  I G C+  ++++  KL D M  +  +PN +T+ +
Sbjct: 268 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 327

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKP--FMYNPVIDGFCKAGNVDEANVIVAE-ME 499
           L++ LC+  ++++AR  L +      VP P   ++N +I+G+   G +DEA  ++ E M 
Sbjct: 328 LMHGLCRMGKVDEARMLLNK------VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESML 381

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
              C PD  T+  LI+G C KG +V A  + N+M   GC P+ IT   LI    K G   
Sbjct: 382 SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 441

Query: 560 EAFRIMQRAS 569
           EA  ++   S
Sbjct: 442 EARNVLDEMS 451


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 212/419 (50%), Gaps = 11/419 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY-----MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           T N+++   C MG     Q+ F +     +   G+ P++  +   +      G+   A  
Sbjct: 96  TLNILINCFCHMG-----QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              +       ++   Y +L+N + K  +   A+   ++     ++PD   +N +I  + 
Sbjct: 151 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMC 210

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   V +A+  F +M   G S D+VTYNTLI G C V ++     LL E+  K+  +P+V
Sbjct: 211 KYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT-INPNV 269

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  ++   CK GK+ +A  +   M    +KP  +T++ L+DG+  V  +  A+++   
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PDV T++ LI+G+C+N  +++ L L  EM  KN+ P + T++ LI+ LCK  R
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++     + +++          Y+ +IDG CK G++D A  +  +M+++  +P+  TFTI
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           L+ G C  GR+ +A  +F  +L  G   +  T N +I+   K G+  EA  ++ +  ++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDN 508



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 198/383 (51%), Gaps = 7/383 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS-DGHL--PNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +Y  ++  +C++G     +    ++R  DG L  P+  M    + +  +      A GL 
Sbjct: 166 SYATLINGVCKIG---DTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLF 222

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     ++     YN+L+          EA+ +  E       P+ +T+NIL+  L + 
Sbjct: 223 SEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+VK+A      M      PD++TY+TL+ G   V EV +   +   +      +PDV T
Sbjct: 283 GKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG-VTPDVHT 341

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT +I+G+CK   +D+A  ++ EM+   + P  VT++ LIDG  K G +     + + M 
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMR 401

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   DV+T+SSLIDG C+NG L++ + L ++MK + + PN++TFTIL++ LCK  RL 
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA+   + L         + YN +I+G CK G ++EA  ++++ME+  C P+  TF  +I
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521

Query: 515 IGHCMKGRMVEAISIFNKMLRIG 537
           I    K    +A  +  +M+  G
Sbjct: 522 IALFKKDENDKAEKLLRQMIARG 544



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 215/425 (50%), Gaps = 4/425 (0%)

Query: 144 EFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           +F+R+ L + H+     +N ++ S  +M  + +   +   +   G  P+   +   ++  
Sbjct: 46  QFNRM-LCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCF 104

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G+      +L++         T   N+L+  L  +    +A++   +      Q + 
Sbjct: 105 CHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            ++  LI G+ +IG+ + A +F   +      PD+V YNT+I  +C+   V+  + L  E
Sbjct: 165 VSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSE 224

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K   S DVVTY ++I G+C +GK+ +A G+ NEM    I P+  T+N+L+D   K G
Sbjct: 225 MAVKG-ISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ +   ML     PDV+T+S+L+DGY    ++ +   + + M    ++P+V+T+T
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           ILIN  CK   +++A    K++   ++VP    Y+ +IDG CK+G +     ++ EM ++
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               D +T++ LI G C  G +  AI++FNKM      P+  T   L+  L KGG   +A
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463

Query: 562 FRIMQ 566
             + Q
Sbjct: 464 QEVFQ 468



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 209/410 (50%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +++ LC  G         D + + G   N       ++   + G   AA   L + 
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKI 190

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     MYN++++A+ K     EA  +F E        D  T+N LI G   +G++
Sbjct: 191 DGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKL 250

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A     +M     +P++ TYN L+  LC+  +V     +L  V  K+   PDV+TY++
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL-AVMLKACVKPDVITYST 309

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY  + ++ KA  ++N M+  G+ P   T+ +LI+GF K   +  A  + + M    
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P +VT+SSLIDG C++G+++    L DEM+ +    +V T++ LI+ LCK   L+ A 
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++K  ++ P  F +  ++DG CK G + +A  +  ++  K    +  T+ ++I GH
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +G + EA+++ +KM   GC P+  T  ++I  L K    ++A +++++
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 539



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 174/379 (45%), Gaps = 36/379 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N +L++  K  +   AV +         QPD  T NILI     +G++   F     + 
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD VT NTLI GLC   +V +      ++     F  + V+Y ++I+G CK+G  
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL-LAQGFQLNQVSYATLINGVCKIGDT 180

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A     +++    KP  V +N +ID   K   +  A  +   M   G   DVVT+++L
Sbjct: 181 RAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL 240

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK------- 461
           I G+C  G+L + + L +EM  K ++PNVYT+ IL++ALCKE ++ +A+  L        
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300

Query: 462 -----------------------QLKWNDL-----VPKPFMYNPVIDGFCKAGNVDEANV 493
                                  Q  +N +      P    Y  +I+GFCK   VDEA  
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALN 360

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  EM +K   P  VT++ LI G C  GR+     + ++M   G   D IT +SLI  L 
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLC 420

Query: 554 KGGMPNEAFRIMQRASEDQ 572
           K G  + A  +  +  + +
Sbjct: 421 KNGHLDRAIALFNKMKDQE 439



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 134/283 (47%), Gaps = 1/283 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N +  TYN+++ +LC+ G     + V   M      P+       +       +   A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + + +      VT     Y  L+N   K    DEA+ +FKE  +    P   T++ LI G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +   ++   +M   G   D++TY++LI GLC+   + R   L  ++K   E  P
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK-DQEIRP 442

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           ++ T+T ++ G CK G++  A  ++ ++ + G   +  T+NV+I+G  K G +  A  M 
Sbjct: 443 NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 502

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +M   G +P+  TF ++I    +  + ++  KL  +M  + L
Sbjct: 503 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 217/447 (48%), Gaps = 16/447 (3%)

Query: 125 NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
           ++++ I+R  + +L L              S K YN  +RSL    + + +  V+  +  
Sbjct: 131 DAIQAIRRTGSARLAL--------------SPKCYNFALRSLARFDMTEYMGRVYSQLVQ 176

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           DG LP++      + S  + G    A         G +   TF  N+L+    +     +
Sbjct: 177 DGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRK 236

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A ++F     +  Q + +++ ILIQGL     V+KA   F  M   GCSP++  +  LIS
Sbjct: 237 ACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLIS 296

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+   V     LL +   ++   P V+TY ++I GY KLG+M+ A  I   M   G  
Sbjct: 297 GLCKSGRVGDAR-LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 355

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P   T+N LI G         AE +    +  G+ P VVTF++LI+GYC   + +  L++
Sbjct: 356 PDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 414

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            ++M       ++  F  LIN+L K++RL +A+  L ++  N LVP    Y  +IDG+CK
Sbjct: 415 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 474

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           +G VD A  ++  ME   C+P+  T+  L+ G     ++ +A+++  KM + G  P+ IT
Sbjct: 475 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASED 571
             +L+         + AFR+ +   ++
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQN 561



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 201/410 (49%), Gaps = 5/410 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    ++ +++ + ++ +G  P        ++    A K D A  + ++ 
Sbjct: 360 TYNTLIYGLCDQKTEEAEELLNNAVK-EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +  +   ++  L+N+L+K++   EA  +  E       P+  T+  +I G  + G+V
Sbjct: 419 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 478

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    M   GC P+  TYN+L+ GL +  ++ +   LL +++ K    P+V+TYT+
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ-KDGIIPNVITYTT 537

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C     D A  ++  M   G+KP    + VL D   K G    AE     ++  G
Sbjct: 538 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKG 594

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
                V +++LIDG+ + G  +    L + M  +  +P+ YT+++L++ALCK+ RLN+A 
Sbjct: 595 VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEAL 654

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L Q+    +    F Y  +ID   + G  D A  +  EM     KP   T+T+ I  +
Sbjct: 655 PILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSY 714

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +GR+ +A  +  KM R G APD +T N LI      G  + AF  ++R
Sbjct: 715 CKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 764



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 180/361 (49%), Gaps = 4/361 (1%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            ++S I+  +   AK LL++     +  +   Y S+++   K    D A+ + K   R  
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            QP+ WT+N L+ GL +  ++ KA      M   G  P+++TY TL+ G C  ++     
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            L  E+  ++   PD   Y  +    CK G+ ++A   Y+ +   G+  + V +  LIDG
Sbjct: 553 RLF-EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDG 608

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K GN   A  + ERM+  G  PD  T+S L+   C+  +LN+ L + D+M  + +   
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           ++ +TILI+ + +E + + A+R   ++  +   P    Y   I+ +CK G +++A  ++ 
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +ME +   PD VT+ ILI G    G +  A S   +M+   C P+  T   L+  LLKG 
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788

Query: 557 M 557
           +
Sbjct: 789 L 789



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 195/444 (43%), Gaps = 69/444 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y ++++ LC+        V+F  M+ DG  PN     F +S   ++G+   A+      
Sbjct: 255 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR------ 308

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                         LL   + QN                  P   T+N +I G S++G +
Sbjct: 309 --------------LLFDAMPQNGV---------------VPSVMTYNAMIVGYSKLGRM 339

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   GC PD  TYNTLI GLC   +     ELL     K  F+P VVT+T+
Sbjct: 340 NDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNA-VKEGFTPTVVTFTN 397

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC   K D A  + N+M S   K     F  LI+   K   +  A+ +   + + G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+V+T++S+IDGYC++G+++  L++   M+     PN +T+  L+  L K+ +L+ A 
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L +++ + ++P    Y  ++ G C   + D A  +   ME+   KPD+  + +L    
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 518 CMKGRMVEAIS--------------------------------IFNKMLRIGCAPDDITV 545
           C  GR  EA S                                +  +M+  GC PD  T 
Sbjct: 578 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 637

Query: 546 NSLISCLLKGGMPNEAFRIMQRAS 569
           + L+  L K    NEA  I+ + S
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMS 661



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 20/424 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++  C+    D+   +F+ M  +G  P+         +  +AG+ + A   +   
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--V 591

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G V ++   Y +L++   K  N D A  + +        PD++T+++L+  L +   +
Sbjct: 592 RKG-VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 650

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G    I  Y  LI  + R  +      +  E+   S   P   TYT 
Sbjct: 651 NEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT-SSGHKPSATTYTV 709

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I+ YCK G+++ A  +  +M   G+ P  VT+N+LIDG G +G +  A    +RM+   
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 769

Query: 398 YLPDVVTFSSLID-------GYCRNG---------QLNQGLKLCDEMKGKNLSPNVYTFT 441
             P+  T+  L+         Y R+          +L+   +L + M    L+P V T++
Sbjct: 770 CEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYS 829

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI   CK  RL +A   L  +    L P   +Y  +I   C     ++A   V+ M E 
Sbjct: 830 SLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSEC 889

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             +P   ++ +L++G C +G   +  S+F  +L +G   D++    L   LLK G  +  
Sbjct: 890 GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDIC 949

Query: 562 FRIM 565
           F+++
Sbjct: 950 FQML 953



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 174/401 (43%), Gaps = 22/401 (5%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + + + ++G +PN       +    ++GK D A  +L          + + YNSL+  LV
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K     +A+ +  +  +    P+  T+  L+QG     +   AF  F  M   G  PD  
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            Y  L   LC+       +  +     +   +   V YT++I G+ K G  D A  +   
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFI----VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIER 624

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P + T++VL+    K   +  A  + ++M   G    +  ++ LID   R G+
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   ++ +EM      P+  T+T+ IN+ CKE RL DA   + +++   + P    YN 
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG-----RMVEAISIFN- 531
           +IDG    G +D A   +  M    C+P+  T+  L++ H +KG     R V+   ++N 
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC-LLLKHLLKGNLAYVRSVDTSGMWNL 803

Query: 532 -----------KMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                      +M++ G  P   T +SLI+   K G   EA
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 132/305 (43%), Gaps = 17/305 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++  +   G HD  + +++ M S GH P++     F++S  + G+ + A+ L+ +  
Sbjct: 672 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 731

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ--------- 269
              V      YN L++        D A    K       +P+ WT+ +L++         
Sbjct: 732 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 791

Query: 270 -------GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
                  G+  + E+   ++    M   G +P + TY++LI+G C+   +     LL  +
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 851

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K   SP+   YT +I   C     +KA    + M+ CG +P   ++ +L+ G    G+
Sbjct: 852 CGKG-LSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 910

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
               + +   +L  GY  D V +  L DG  + G ++   ++   M+ +    +  T+ +
Sbjct: 911 FEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYAL 970

Query: 443 LINAL 447
           + N +
Sbjct: 971 VTNKM 975


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 207/413 (50%), Gaps = 13/413 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
           YN+ +  L +      V+ +   M +D   P+       + +  +A +   A  +L    
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
               RP E T +T M        +++ + + A+ + +       +  + + N+L+ GL +
Sbjct: 227 NYGLRPDEKTFTTLM-----QGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCK 281

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G +++A  F Y+   F   PD VT+N L++GLCR   + +G E++ +   +  F  DV 
Sbjct: 282 EGRIEEALRFIYEEEGF--CPDQVTFNALVNGLCRTGHIKQGLEMM-DFMLEKGFELDVY 338

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S+ISG CKLG++D+A  I + M S   +P+ VT+N LI    K  ++ +A  +   +
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            S G LPDV TF+SLI G C        ++L +EMK K   P+ +T++ILI +LC E RL
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A   LK+++ +       +YN +IDG CK   V +A  I  +ME        VT+  L
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTL 518

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           I G C   R+ EA  + ++M+  G  PD  T  +++    + G    A  I+Q
Sbjct: 519 INGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQ 571



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 197/409 (48%), Gaps = 3/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++R+LC+        ++ + M + G  P+       +   I     + A  +    
Sbjct: 201 TFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELM 260

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +++   N L+N L K+   +EA+    E       PD  TFN L+ GL R G +
Sbjct: 261 VESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFC--PDQVTFNALVNGLCRTGHI 318

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+  E    M   G   D+ TYN+LISGLC++ E+    E+L  +    +  P+ VTY +
Sbjct: 319 KQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM-VSRDCEPNTVTYNT 377

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK   ++ AT +   + S G+ P   TFN LI G     N   A  + E M   G
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T+S LI+  C   +L + L L  EM+    + NV  +  LI+ LCK NR+ DA 
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q++   +      YN +I+G CK+  V+EA  ++ +M  +  KPDK T+T ++   
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C +G +  A  I   M   GC PD +T  +LI  L K G  + A ++++
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLR 606



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 187/385 (48%), Gaps = 2/385 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC  G       + D+M   G   +       +S   + G+ D A  +L   
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +T  YN+L+  L K+N+ + A  + +        PD  TFN LIQGL      
Sbjct: 364 VSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR 423

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E F +M   GC PD  TY+ LI  LC    +     LLKE++  S  + +VV Y +
Sbjct: 424 EIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMEL-SGCARNVVVYNT 482

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  ++  A  I+++M   G+  S+VT+N LI+G  K   +  A  + ++M+  G
Sbjct: 483 LIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG 542

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T+++++  +C+ G + +   +   M      P++ T+  LI  LCK  R++ A 
Sbjct: 543 LKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVAS 602

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L+ ++   +V  P  YNPVI   CK     EA  +  EM EK   PD +T+ I+  G 
Sbjct: 603 KLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGL 662

Query: 518 CMKGRMV-EAISIFNKMLRIGCAPD 541
           C  G  + EA+    +ML  G  P+
Sbjct: 663 CNGGGPIQEAVDFTVEMLEKGILPE 687



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 198/425 (46%), Gaps = 9/425 (2%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L    KT+  +M+   E    +    + + M   G    S  +   V+   + G+ +
Sbjct: 227 NYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIE 286

Query: 209 AAKGLLSQ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
            A   + +   F P +VT     +N+L+N L +  +  + + M         + D +T+N
Sbjct: 287 EALRFIYEEEGFCPDQVT-----FNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYN 341

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI GL ++GE+ +A E  + M S  C P+ VTYNTLI  LC+ N V    EL + +  K
Sbjct: 342 SLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSK 401

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PDV T+ S+I G C     + A  ++ EM   G  P   T+++LI+       +  
Sbjct: 402 GVL-PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKE 460

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + + M   G   +VV +++LIDG C+N ++     + D+M+   +S +  T+  LIN
Sbjct: 461 ALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLIN 520

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK  R+ +A + + Q+    L P  F Y  ++  FC+ G++  A  IV  M    C+P
Sbjct: 521 GLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEP 580

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D VT+  LI G C  GR+  A  +   +   G        N +I  L K     EA R+ 
Sbjct: 581 DIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLF 640

Query: 566 QRASE 570
           +   E
Sbjct: 641 REMME 645



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 22/339 (6%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD----TWTFNILIQGLSRIGEVKKAFE 282
           F  + LL+ L +Q ++  A+ +F+      +QP+       F+ L++ L+R G       
Sbjct: 57  FSPSQLLDLLRRQPDSSSALSLFQ---WASAQPNYSAHPSVFHELLRQLARAGSFDSMLT 113

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-----FKSEFS--PDVVTY 335
               M S     D  T+      L  +   A  H L  E+       + +F+  PD   Y
Sbjct: 114 LLRQMHSSKIPVDESTF------LIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFY 167

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
              +S   K  K+     ++++M +  + P   TFN+LI    K   +  A  M E M +
Sbjct: 168 NVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPN 227

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           +G  PD  TF++L+ G+     +   L++ + M          +  +L+N LCKE R+ +
Sbjct: 228 YGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEE 287

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A RF+ +       P    +N +++G C+ G++ +   ++  M EK  + D  T+  LI 
Sbjct: 288 ALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLIS 345

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           G C  G + EA+ I + M+   C P+ +T N+LI  L K
Sbjct: 346 GLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCK 384



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 2/198 (1%)

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           F+ L+    + G+  S   +  +M S     D  TF   ++ Y  +  L+  +     + 
Sbjct: 95  FHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLM 154

Query: 430 GKNLS--PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
            ++ +  P+   + + ++ L K N+L        ++  + + P    +N +I   CKA  
Sbjct: 155 ERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQ 214

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +  A +++ +M     +PD+ TFT L+ G   +  +  A+ I   M+  GC    ++VN 
Sbjct: 215 LRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNV 274

Query: 548 LISCLLKGGMPNEAFRIM 565
           L++ L K G   EA R +
Sbjct: 275 LVNGLCKEGRIEEALRFI 292


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 182/326 (55%), Gaps = 1/326 (0%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           ++ +++N L+N   K+ N  +A  +F E  +   +P   +FN LI G  ++G +   F  
Sbjct: 238 LNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRL 297

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
            + M      PD+ TY+ LI+ LC+ N++   H L  E+  +    P+ V +T++I G+ 
Sbjct: 298 KHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEM-CERGLIPNDVIFTTLIHGHS 356

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           + G++D     Y +M S G++P  V +N L++GF K G++V+A  + + M+  G  PD V
Sbjct: 357 RNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKV 416

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+++LIDG+CR G ++  L++  EM    +  +   F+ LI  +CKE R+ DA R L+++
Sbjct: 417 TYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREM 476

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    Y  ++D FCK G+      ++ EM+     P+ VT+ +L+ G C  G+M
Sbjct: 477 LRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQM 536

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLI 549
             A  + + ML +G  PDDIT N+L+
Sbjct: 537 KNADMLLDAMLNVGVVPDDITYNTLL 562



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 160/333 (48%), Gaps = 1/333 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +N++M   C+ G     Q VFD +      P        ++   + G  D    L    
Sbjct: 242 VFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHM 301

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                    F Y++L+NAL K+N  D A  +F E       P+   F  LI G SR G++
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQI 361

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               E +  M S G  PDIV YNTL++G C+  ++     ++  +  +    PD VTYT+
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKVTYTT 420

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+ G +D A  I  EM+  GI+   V F+ LI G  K G ++ AE     ML  G
Sbjct: 421 LIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAG 480

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT++ ++D +C+ G    G KL  EM+     PNV T+ +L+N LCK  ++ +A 
Sbjct: 481 MKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNAD 540

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
             L  +    +VP    YN +++G  +  N  +
Sbjct: 541 MLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 185/387 (47%), Gaps = 14/387 (3%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           +IE  VS   R GK  A+   +S        M  F+ ++L+   +      + +    + 
Sbjct: 140 LIELVVS---RKGKNSASSVFISLVEMRGTPMCDFLVDALMITYMDLGFIPDVI----QC 192

Query: 253 FRLYSQPDTWTFNI-----LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           FRL S+   +   I     L+  + ++      + F+ ++   G   ++  +N L++  C
Sbjct: 193 FRL-SRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFC 251

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +   +    ++  E+  K    P VV++ ++I+GYCK+G +D    + + M     +P  
Sbjct: 252 KEGNICDAQKVFDEIT-KRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDV 310

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T++ LI+   K   M  A  +   M   G +P+ V F++LI G+ RNGQ++   +   +
Sbjct: 311 FTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQK 370

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  K L P++  +  L+N  CK   L  AR  +  +    L P    Y  +IDGFC+ G+
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGD 430

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           VD A  I  EM++   + D+V F+ LI G C +GR+++A     +MLR G  PDD+T   
Sbjct: 431 VDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTM 490

Query: 548 LISCLLKGGMPNEAFRIMQRASEDQNL 574
           ++    K G     F++++    D ++
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHI 517



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 177/358 (49%), Gaps = 11/358 (3%)

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           C     CDA K +  +     +  +   +N+L+N   K  N D    +     +  ++PD
Sbjct: 251 CKEGNICDAQK-VFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPD 309

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            +T++ LI  L +  ++  A   FY+M   G  P+ V + TLI G  R  ++    +L+K
Sbjct: 310 VFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQI----DLMK 365

Query: 321 EVKFK---SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           E   K       PD+V Y ++++G+CK G +  A  I + M   G++P  VT+  LIDGF
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGF 425

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G++ +A  +R+ M   G   D V FS+LI G C+ G++    +   EM    + P+ 
Sbjct: 426 CRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDD 485

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+T++++A CK+       + LK+++ +  +P    YN +++G CK G +  A++++  
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDA 545

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           M      PD +T+  L+ GH    R   A   + +   IG   D  +  SL++ L + 
Sbjct: 546 MLNVGVVPDDITYNTLLEGH---HRHANASKHYKQKPEIGIVADLASYKSLVNELYRA 600



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 4/295 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ +LC+    D    +F  M   G +PN  +    +    R G+ D  K    + 
Sbjct: 312 TYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKM 371

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     +YN+L+N   K  +   A  +     R   +PD  T+  LI G  R G+V
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDV 431

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E   +M   G   D V ++ LI G+C+   V      L+E+  ++   PD VTYT 
Sbjct: 432 DTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREM-LRAGMKPDDVTYTM 490

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++  +CK G       +  EM S G  P+ VT+NVL++G  K+G M +A+ + + ML+ G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVG 550

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
            +PD +T+++L++G+ R+   ++  K   E+    +  ++ ++  L+N L + ++
Sbjct: 551 VVPDDITYNTLLEGHHRHANASKHYKQKPEI---GIVADLASYKSLVNELYRASK 602


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 214/416 (51%), Gaps = 46/416 (11%)

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           DG   + P +    S+ +R         L S+ +   + +ST   + LL+AL     +  
Sbjct: 44  DGAPSSLPNLLLTASAAVRPHATSLR--LYSRMKSLSLPISTASLHPLLSAL----PSAP 97

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  +F + FRL     T TFNI+++ L   G+  +A E    M      P+ VTYNT+I+
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIA 153

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-I 363
           G C    V    ++++E++ +   +P+  TY +VISG+CK+G++D+A  +++EM + G +
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP AV +N LI G+   G + +A   R+RM+  G    V T++ L+     +G+  +  +
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRL--------NDARRFLK-------------- 461
           L +EM GK L+P+V+T+ ILIN  CKE  +        N +RR ++              
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 462 ---QLKWND----------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              Q++  D          + P   +YN +I+    +GN+D A  I+ EME+KR  PD V
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T+  L+ G C+ GR+ EA  + ++M   G  PD +T N+LIS     G   +A RI
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 449



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 214/442 (48%), Gaps = 18/442 (4%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F +  R+ L L  +  T+N+++R LC  G       +   M      PN+      ++  
Sbjct: 102 FADMFRLRLPLCTT--TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGF 155

Query: 202 IRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQP 259
              G+  AA  ++ + R  G +  + + Y ++++   K    DEAV +F E   +   +P
Sbjct: 156 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 215

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +   +N LI G    G++  A  +   M   G +  + TYN L+  L         +EL+
Sbjct: 216 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 275

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  K   +PDV TY  +I+G+CK G + KA  I+  M+  G++ + VT+  LI    K
Sbjct: 276 EEMGGKG-LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 334

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + + +  +  G  PD+V +++LI+ +  +G +++  ++  EM+ K ++P+  T
Sbjct: 335 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L+  LC   R+++AR+ + ++    + P    YN +I G+   G+V +A  I  EM 
Sbjct: 395 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 454

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K   P  +T+  LI G C  G+  +A ++  +M+  G  PDD T  SLI      G+  
Sbjct: 455 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE-----GLTT 509

Query: 560 EAFRIMQRASEDQNLQLPSWKK 581
           E     +RA +D+ L      K
Sbjct: 510 ED----ERAIDDERLAAADAAK 527


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 173/317 (54%), Gaps = 1/317 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D+A+  F     ++  P    F  L+  ++++            M SFG  P++ T 
Sbjct: 24  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 83

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N LI+  C +N V     +L ++  K    PD  T+T++I G C  GK+ +A  ++++M 
Sbjct: 84  NILINSFCHLNRVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 142

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P+ VT+  LI+G  KVGN  +A  +   M      PDVV ++S+ID  C++ Q+ 
Sbjct: 143 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 202

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L  +M G+ +SP+++T+T L++ALC           L Q+  + ++P   +++ V+
Sbjct: 203 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 262

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G V EA+ IV  M ++  +PD VT+T L+ GHC++  M EA+ +F+ M+R G A
Sbjct: 263 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 322

Query: 540 PDDITVNSLISCLLKGG 556
           PD I+  +LI+   K G
Sbjct: 323 PDVISYTTLINAGKKDG 339



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 177/386 (45%), Gaps = 45/386 (11%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF---- 217
           ++ S+ +M  + +V  +   M S G  PN   +   ++S     +   A  +L++     
Sbjct: 51  LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 110

Query: 218 -RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +P   T +T     L+  L  +    EA+++F +      QP+  T+  LI GL ++G 
Sbjct: 111 HQPDPTTFTT-----LIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 165

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A      M    C PD+V Y ++I  LC+  +V     L  ++  +   SPD+ TYT
Sbjct: 166 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG-ISPDIFTYT 224

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++   C L +    T + N+M +  I P  V F+ ++D   K G +  A  + + M+  
Sbjct: 225 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 284

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA---------- 446
           G  PDVVT+++L+DG+C   ++++ +K+ D M  K  +P+V ++T LINA          
Sbjct: 285 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVS 344

Query: 447 ------LCKEN------------------RLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                 L KE                        R  L ++  + ++P   +++ V+D  
Sbjct: 345 LQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDAL 404

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKV 508
           CK G V EA+ +V  M ++  +P+ V
Sbjct: 405 CKEGKVMEAHDVVDMMIKRGVEPNAV 430



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 183/402 (45%), Gaps = 37/402 (9%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   +++F   ++S  +         L +Q     V  + +  N L+N+    N    A 
Sbjct: 41  PPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAF 100

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  +L  QPD  TF  LI+GL   G++ +A   F  M   G  P++VTY TLI+GL
Sbjct: 101 SVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGL 160

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+V   +    LL+ ++ +    PDVV YTS+I   CK  ++ +A  ++++M   GI P 
Sbjct: 161 CKVGNTSAAIRLLRSME-QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 219

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+  L+     +        +  +M++   LPDVV FS+++D  C+ G++ +  ++ D
Sbjct: 220 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 279

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M  + + P+V T+T L++  C ++ +++A +    +      P    Y  +I+   K G
Sbjct: 280 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG 339

Query: 487 N----------------------------------VDEANVIVAEMEEKRCKPDKVTFTI 512
                                               ++   ++ EM   +  P+ V F+ 
Sbjct: 340 GGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFST 399

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           ++   C +G+++EA  + + M++ G  P+ + V   + C+ K
Sbjct: 400 VVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTMKCVEK 441



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 155/332 (46%), Gaps = 11/332 (3%)

Query: 137 KLGLKFLEFSRVNLSLNHSF--KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           ++G  F   +++ L L H     T+  ++R LC  G       +FD M  +G  PN    
Sbjct: 95  RVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTY 153

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G   AA  LL     G       +Y S++++L K     EA  +F +   
Sbjct: 154 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG 213

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PD +T+  L+  L  + E K        M +    PD+V ++T++  LC+  +V  
Sbjct: 214 QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTE 273

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            HE++ ++  +    PDVVTYT+++ G+C   +MD+A  +++ M   G  P  +++  LI
Sbjct: 274 AHEIV-DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 332

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL---NQGLKLCDEMKGK 431
           +   K G  + +  ++E +      PD V   ++     R  ++    +G  L +EM   
Sbjct: 333 NAGKKDGGGLVS--LQEVIGLVKETPDAVKGGAV--EVIRKDKMKLFEKGRTLLNEMVNS 388

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            + PNV  F+ +++ALCKE ++ +A   +  +
Sbjct: 389 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 420



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 15/276 (5%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           +NTL   L   N +   H             P +V +  +++   K+        +  +M
Sbjct: 23  FNTLDDALSSFNRLLHMHP-----------PPSIVDFAKLLTSIAKMKHYSTVLSLSTQM 71

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
           +S G+ P+  T N+LI+ F  +  +  A  +  ++L  G+ PD  TF++LI G C  G++
Sbjct: 72  DSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKI 131

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + L L D+M  +   PNV T+  LIN LCK    + A R L+ ++  +  P   +Y  +
Sbjct: 132 GEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI 191

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           ID  CK   V EA  + ++M  +   PD  T+T L+   C         ++ N+M+    
Sbjct: 192 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 251

Query: 539 APDDITVNSLISCLLKGGMPNEAFRI----MQRASE 570
            PD +  ++++  L K G   EA  I    +QR  E
Sbjct: 252 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 287



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 35/244 (14%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++ SLC+         +F  M   G  P+       V +     +      LL+Q  
Sbjct: 188 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 247

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++     +++++++AL K+    EA  +     +   +PD  T+  L+ G     E+ 
Sbjct: 248 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 307

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLIS-------GLCRVNEV------------------- 312
           +A + F  M   G +PD+++Y TLI+       GL  + EV                   
Sbjct: 308 EAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVI 367

Query: 313 --------ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                    +G  LL E+   S+  P+VV +++V+   CK GK+ +A  + + M   G++
Sbjct: 368 RKDKMKLFEKGRTLLNEM-VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 426

Query: 365 PSAV 368
           P+AV
Sbjct: 427 PNAV 430



 Score = 38.5 bits (88), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 49/121 (40%)

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           N L+DA     +L      P    +  ++    K  +      +  +M+     P+  T 
Sbjct: 24  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTL 83

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            ILI   C   R+  A S+  K+L++G  PD  T  +LI  L   G   EA  +  +  +
Sbjct: 84  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 143

Query: 571 D 571
           +
Sbjct: 144 E 144


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 228/437 (52%), Gaps = 23/437 (5%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI--EFFVSSCIR----AGKCDA 209
           +  YN+++  +C      S+ V+    ++ G + ++ ++  +  VS+  R    AGK + 
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +         T  Y+ ++  L   +  D A  +F+E    +  PD +T+ ILI 
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              ++G +++A ++F +M   GC+P++VTY  LI    +  +++  +EL  E+       
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-EMMLSEGCI 582

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM---------------NSCGIK-PSAVTFNVL 373
           P+VVTYT++I G+CK G+++KA  IY  M               +   I+ P+  T+  L
Sbjct: 583 PNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGAL 642

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +DG  K   +  A  + + M   G  P+ + + +LIDG+C+ G+L++   +  +M  +  
Sbjct: 643 VDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGY 702

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            PNVYT++ LI+ L K+ RL+ A + L ++  N   P   +Y  +IDG CK G  DEA  
Sbjct: 703 GPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYR 762

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +++ MEEK C P+ VT+T +I G    G++ + + +  +M   GCAP+ +T   LI+   
Sbjct: 763 LMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCC 822

Query: 554 KGGMPNEAFRIMQRASE 570
             G+ ++A +++    +
Sbjct: 823 AAGLLDDAHQLLDEMKQ 839



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 208/430 (48%), Gaps = 25/430 (5%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           EKL  L+ LE+ ++     L    +  ++VN+S        NL  R LC  G  +    +
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVV-LNKVNVS--------NLA-RCLCGAGKFEKAYSI 467

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
              M S G +P++      +     A K D A  L  + +   V    F Y  L+++  K
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                +A   F E  R    P+  T+  LI    +  ++  A E F  M S GC P++VT
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEF---------------SPDVVTYTSVISGYC 343
           Y  LI G C+  ++ +  ++   ++  ++                 P++ TY +++ G C
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K  K+ +A  + + M+  G +P+ + ++ LIDGF KVG +  A+ +  +M   GY P+V 
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+SSLID   ++ +L+  LK+   M   + +PNV  +T +I+ LCK  + ++A R +  +
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM 767

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +     P    Y  +IDGF KAG VD+   ++ +M  K C P+ VT+ +LI   C  G +
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLL 827

Query: 524 VEAISIFNKM 533
            +A  + ++M
Sbjct: 828 DDAHQLLDEM 837



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 203/454 (44%), Gaps = 61/454 (13%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LCE  L +        MRS   +PN       +  C+R  +    K +LS   
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG-------- 270
                 S  ++NSL++A  +  +   A  + K+      QP    +NILI G        
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421

Query: 271 ---------------------------------LSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                                            L   G+ +KA+    +M S G  PD  
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ +I  LC  ++V     L +E+K  +   PDV TYT +I  +CK+G + +A   ++E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMK-SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VT+  LI  + K   M SA  + E MLS G +P+VVT+++LIDG+C++GQ
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  ++   M+G    P+V  +           +++D          N   P  F Y  
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYF----------KIDDG---------NIRDPNIFTYGA 641

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG CKA  V EA  ++  M  + C+P+ + +  LI G C  G++ EA  +F KM   G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             P+  T +SLI  L K    + A +++ R  E+
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 136/557 (24%), Positives = 234/557 (42%), Gaps = 73/557 (13%)

Query: 83  KEVNYRCSNEFWFVKVVCTLLLRSS-----YLSDTCARYLCEKLSPLNSLEVIKRLDNPK 137
           K V+ RCSN+     V+ + ++R++     + +    R   EKL+    ++V+  + NP+
Sbjct: 88  KSVSGRCSND----AVLISDVIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLSLVKNPE 143

Query: 138 LGLKFLEFSRVNLSLNHSFKTY-----------------------------------NLV 162
           LG+KF  ++   +   H+   Y                                   N++
Sbjct: 144 LGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVL 203

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +R  C  GL +        ++  G+ P+       V   + A + D A  +  +      
Sbjct: 204 IRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF 263

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
            M  +     ++ L K     EA+ +  KE F+L    DT  +  +I GL      ++A 
Sbjct: 264 NMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL----DTVIYTQMISGLCEASLFEEAM 319

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +F   M S  C P++VTY  L+ G  R  ++ R   +L  +  +  + P    + S+I  
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCY-PSRRIFNSLIHA 378

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YC+ G    A  +  +M  CG +P  V +N+LI G      + S + +     ++G + D
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 402 V------VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                  V  S+L    C  G+  +   +  EM  K   P+  T++ +I  LC  +++++
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    +++K N +VP  F Y  +ID FCK G + +A     EM    C P+ VT+T LI 
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +    +M  A  +F  ML  GC P+ +T  +LI    K G   +A +I  R        
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR-------- 610

Query: 576 LPSWKKAVPLRTNTDIP 592
                    +R N DIP
Sbjct: 611 ---------MRGNADIP 618



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 198/427 (46%), Gaps = 25/427 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ S C++GL    +  FD M  DG  PN       + + ++A K  +A  L    
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------YFRL----YSQPDT 261
                  +   Y +L++   K    ++A  ++              YF++       P+ 
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T+  L+ GL +  +VK+A +    M   GC P+ + Y+ LI G C+V ++     +  +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGK 379
           +  +  + P+V TY+S+I    K  ++D A  + + M  NSC   P+ + +  +IDG  K
Sbjct: 697 MSERG-YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCA--PNVIIYTEMIDGLCK 753

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           VG    A  +   M   G  P+VVT++++IDG+ + G++++ L+L  +M  K  +PN  T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + +LIN  C    L+DA + L ++K          Y  VI+GF +   +     ++ E+ 
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIA 871

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG--CAPDDITVNSLISCLLKGGM 557
           E    P    + ILI   C  GR+  A+ +   M       A D    +SLI  L     
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASK 931

Query: 558 PNEAFRI 564
            ++AF +
Sbjct: 932 VDKAFEL 938



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 169/377 (44%), Gaps = 21/377 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI-----------EFFVSSCIRAGK 206
           TY  ++   C+ G  +    ++  MR +  +P+  M              F    +  G 
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 207 CDA-----AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           C A     A+ LL          +  +Y++L++   K    DEA  +F +       P+ 
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T++ LI  L +   +  A +    M    C+P+++ Y  +I GLC+V +    + L+  
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ K    P+VVTYT++I G+ K GK+DK   +  +M + G  P+ VT+ VLI+     G
Sbjct: 767 MEEKG-CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + + M    +   +  +  +I+G+ R   ++ G  L DE+      P +  + 
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYR 883

Query: 442 ILINALCKENRLNDARRFLKQLK--WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ILI++ CK  RL  A    K +    +       +Y+ +I+    A  VD+A  + A+M 
Sbjct: 884 ILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943

Query: 500 EKRCKPDKVTFTILIIG 516
           ++   P+   F  L+ G
Sbjct: 944 KRGGIPELSIFFYLVKG 960



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 104/292 (35%), Gaps = 69/292 (23%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++   C++G  D  Q+VF  M   G+ PN       +    +  + D A  +LS+ 
Sbjct: 673 VYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +Y  +++ L K    DEA  +          P+  T+  +I G  + G+V
Sbjct: 733 LENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-------------- 323
            K  E    MG+ GC+P+ VTY  LI+  C    +   H+LL E+K              
Sbjct: 793 DKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852

Query: 324 ---FKSEF---------------SPDVVTYTSVISGYCKLG------------------- 346
              F  EF                P +  Y  +I  +CK G                   
Sbjct: 853 IEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYS 912

Query: 347 ------------------KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
                             K+DKA  +Y +M   G  P    F  L+ G  ++
Sbjct: 913 AADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRI 964



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 12/162 (7%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD---GHLPN-SPMIEFFVSSCIRAGKCDAA 210
           +F TY +++   C  GL D    + D M+      H+     +IE F    I       +
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFI------IS 863

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL--YSQPDTWTFNILI 268
            GLL +            Y  L+++  K    + A+ + K       YS  D   ++ LI
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLI 923

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           + LS   +V KAFE + DM   G  P++  +  L+ GL R+N
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 211/434 (48%), Gaps = 11/434 (2%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L+ S  T N V+    E GL D  + VFD M   G  P+S   +  V  C R GK  
Sbjct: 198 NQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQ 257

Query: 209 AAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            A   LS      F P   T +      +L+AL +    + A++ F++   L  +P+   
Sbjct: 258 EADRWLSGMIQRGFIPDNATCTL-----ILSALCENGLVNRAIWYFRKMIDLGFKPNLIN 312

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           F  LI GL + G +K+AFE   +M   G  P++ T+  LI GLC+     +   L  ++ 
Sbjct: 313 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 372

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
               + P+V TYTS+I GYCK  K+++A  +++ M   G+ P+  T+  LI+G  K GN 
Sbjct: 373 RSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNF 432

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +   M   G+ P++ T++++ID  C+  +  +  +L ++     L  +  T+TIL
Sbjct: 433 DRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 492

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I   CK++ +  A  F  ++          + N +I  FC+   + E+  +   +     
Sbjct: 493 IQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 552

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P K T+T +I G+C +G    A+  F+ M R GC PD  T  SLIS L K  M +EA +
Sbjct: 553 VPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 612

Query: 564 IMQRASEDQNLQLP 577
           + + A  D+ L  P
Sbjct: 613 LYE-AMIDRGLSPP 625



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 119/234 (50%), Gaps = 1/234 (0%)

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++  + ++G++++A G+  +M + G+ PS++T N +++   + G +  AE + + M   G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  +F  ++ G  R+G++ +  +    M  +   P+  T T++++ALC+   +N A 
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            + +++      P    +  +IDG CK G++ +A  ++ EM     KP+  T T LI G 
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 518 CMKGRMVEAISIFNKMLRIGC-APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C +G   +A  +F K++R     P+  T  S+I    K    N A  +  R  E
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 409


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 11/434 (2%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L  S  T N V+    E+GL +  + VFD M   G +P+S   +  V  C R GK  
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234

Query: 209 AAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            A   L+      F P   T +      +L AL +    + A++ F++   L  +P+   
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTL-----ILTALCENGLVNRAIWYFRKMIDLGFKPNLIN 289

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           F  LI GL + G +K+AFE   +M   G  P++ T+  LI GLC+     +   L  ++ 
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
               + P+V TYTS+I GYCK  K+++A  +++ M   G+ P+  T+  LI+G  K G+ 
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +   M   G++P++ T+++ ID  C+  +  +  +L ++     L  +  T+TIL
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I   CK+N +N A  F  ++          + N +I  FC+   + E+  +   +     
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P K T+T +I  +C +G +  A+  F+ M R GC PD  T  SLIS L K  M +EA +
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589

Query: 564 IMQRASEDQNLQLP 577
           + + A  D+ L  P
Sbjct: 590 LYE-AMIDRGLSPP 602



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 174/363 (47%), Gaps = 2/363 (0%)

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G+ + A G++   +   +T S+   N +L   V+    + A  +F E       PD+ ++
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            +++ G  R G++++A  +   M   G  PD  T   +++ LC    V R     +++  
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM-I 279

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
              F P+++ +TS+I G CK G + +A  +  EM   G KP+  T   LIDG  K G   
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339

Query: 385 SAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            A  +  +++ S  Y P+V T++S+I GYC+  +LN+   L   MK + L PNV T+T L
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           IN  CK      A   +  +     +P  + YN  ID  CK     EA  ++ +      
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           + D VT+TILI   C +  + +A++ F +M + G   D    N LI+   +     E+ R
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519

Query: 564 IMQ 566
           + Q
Sbjct: 520 LFQ 522



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 182/423 (43%), Gaps = 5/423 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGK 206
           ++L    +   +  ++  LC+ G       + + M  +G  PN       +   C R   
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
             A +  L   R      +   Y S++    K++  + A  +F         P+  T+  
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI G  + G   +A+E    MG  G  P+I TYN  I  LC+ +     +ELL +  F  
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA-FSC 457

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
               D VTYT +I   CK   +++A   +  MN  G +      N+LI  F +   M  +
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           E + + ++S G +P   T++S+I  YC+ G ++  LK    MK     P+ +T+  LI+ 
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK++ +++A +  + +    L P       +   +CK  +   A +++  +++K     
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIR- 636

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             T   L+   C + ++  A   F K+L    + D +T+ +  +   + G  N    + +
Sbjct: 637 --TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTE 694

Query: 567 RAS 569
           R S
Sbjct: 695 RIS 697



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 120/235 (51%), Gaps = 1/235 (0%)

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++  + ++G++++A G+  +M + G+ PS++T N +++   ++G +  AE + + M   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD  ++  ++ G  R+G++ +  +    M  +   P+  T T+++ ALC+   +N A 
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            + +++      P    +  +IDG CK G++ +A  ++ EM     KP+  T T LI G 
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 518 CMKGRMVEAISIFNKMLRIGC-APDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C +G   +A  +F K++R     P+  T  S+I    K    N A  +  R  E 
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 203/383 (53%), Gaps = 17/383 (4%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AGK + A  ++ +         T  Y+ ++  L   +  D A  +F+E    +  PD +T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           + ILI    ++G +++A ++F +M   GC+P++VTY  LI    +  +++  +EL  E+ 
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-EMM 576

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM---------------NSCGIK-PSA 367
                 P+VVTYT++I G+CK G+++KA  IY  M               +   I+ P+ 
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T+  L+DG  K   +  A  + + M   G  P+ + + +LIDG+C+ G+L++   +  +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  +   PNVYT++ LI+ L K+ RL+ A + L ++  N   P   +Y  +IDG CK G 
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            DEA  +++ MEEK C P+ VT+T +I G    G++ + + +  +M   GCAP+ +T   
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 548 LISCLLKGGMPNEAFRIMQRASE 570
           LI+     G+ ++A +++    +
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 208/430 (48%), Gaps = 25/430 (5%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           EKL  L+ LE+ ++     L    +  ++VN+S        NL  R LC  G  +    +
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVV-LNKVNVS--------NLA-RCLCGAGKFEKAYSI 467

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
              M S G +P++      +     A K D A  L  + +   V    F Y  L+++  K
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                +A   F E  R    P+  T+  LI    +  ++  A E F  M S GC P++VT
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEF---------------SPDVVTYTSVISGYC 343
           Y  LI G C+  ++ +  ++   ++  ++                 P++ TY +++ G C
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K  K+ +A  + + M+  G +P+ + ++ LIDGF KVG +  A+ +  +M   GY P+V 
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+SSLID   ++ +L+  LK+   M   + +PNV  +T +I+ LCK  + ++A R +  +
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM 767

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +     P    Y  +IDGF KAG VD+   ++ +M  K C P+ VT+ +LI   C  G +
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLL 827

Query: 524 VEAISIFNKM 533
            +A  + ++M
Sbjct: 828 DDAHQLLDEM 837



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 203/454 (44%), Gaps = 61/454 (13%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LCE  L +        MRS   +PN       +  C+R  +    K +LS   
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG-------- 270
                 S  ++NSL++A  +  +   A  + K+      QP    +NILI G        
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421

Query: 271 ---------------------------------LSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                                            L   G+ +KA+    +M S G  PD  
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ +I  LC  ++V     L +E+K  +   PDV TYT +I  +CK+G + +A   ++E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMK-SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VT+  LI  + K   M SA  + E MLS G +P+VVT+++LIDG+C++GQ
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  ++   M+G    P+V  +           +++D          N   P  F Y  
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYF----------KIDDG---------NIRDPNIFTYGA 641

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG CKA  V EA  ++  M  + C+P+ + +  LI G C  G++ EA  +F KM   G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             P+  T +SLI  L K    + A +++ R  E+
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 136/557 (24%), Positives = 234/557 (42%), Gaps = 73/557 (13%)

Query: 83  KEVNYRCSNEFWFVKVVCTLLLRSS-----YLSDTCARYLCEKLSPLNSLEVIKRLDNPK 137
           K V+ RCSN+     V+ + ++R++     + +    R   EKL+    ++V+  + NP+
Sbjct: 88  KSVSGRCSND----AVLISDVIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLSLVKNPE 143

Query: 138 LGLKFLEFSRVNLSLNHSFKTY-----------------------------------NLV 162
           LG+KF  ++   +   H+   Y                                   N++
Sbjct: 144 LGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVL 203

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +R  C  GL +        ++  G+ P+       V   + A + D A  +  +      
Sbjct: 204 IRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF 263

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
            M  +     ++ L K     EA+ +  KE F+L    DT  +  +I GL      ++A 
Sbjct: 264 NMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL----DTVIYTQMISGLCEASLFEEAM 319

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +F   M S  C P++VTY  L+ G  R  ++ R   +L  +  +  + P    + S+I  
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCY-PSRRIFNSLIHA 378

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YC+ G    A  +  +M  CG +P  V +N+LI G      + S + +     ++G + D
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 402 V------VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                  V  S+L    C  G+  +   +  EM  K   P+  T++ +I  LC  +++++
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    +++K N +VP  F Y  +ID FCK G + +A     EM    C P+ VT+T LI 
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +    +M  A  +F  ML  GC P+ +T  +LI    K G   +A +I  R        
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR-------- 610

Query: 576 LPSWKKAVPLRTNTDIP 592
                    +R N DIP
Sbjct: 611 ---------MRGNADIP 618



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 199/427 (46%), Gaps = 25/427 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ S C++GL    +  FD M  DG  PN       + + ++A K  +A  L    
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------YFRL----YSQPDT 261
                  +   Y +L++   K    ++A  ++              YF++       P+ 
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T+  L+ GL +  +VK+A +    M   GC P+ + Y+ LI G C+V ++     +  +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGK 379
           +  +  + P+V TY+S+I    K  ++D A  + + M  NSC   P+ + +  +IDG  K
Sbjct: 697 MSERG-YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCA--PNVIIYTEMIDGLCK 753

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           VG    A  +   M   G  P+VVT++++IDG+ + G++++ L+L  +M  K  +PN  T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + +LIN  C    L+DA + L ++K          Y  VI+GF +   +     ++ E+ 
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIA 871

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG--CAPDDITVNSLISCLLKGGM 557
           E    P    + ILI   C  GR+  A+ +  +M       A D    +SLI  L     
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASK 931

Query: 558 PNEAFRI 564
            ++AF +
Sbjct: 932 VDKAFEL 938



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 175/390 (44%), Gaps = 21/390 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI-----------EFFVSSCIRAGK 206
           TY  ++   C+ G  +    ++  MR +  +P+  M              F    +  G 
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 207 CDA-----AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           C A     A+ LL          +  +Y++L++   K    DEA  +F +       P+ 
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T++ LI  L +   +  A +    M    C+P+++ Y  +I GLC+V +    + L+  
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ K    P+VVTYT++I G+ K GK+DK   +  +M + G  P+ VT+ VLI+     G
Sbjct: 767 MEEKG-CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + + M    +   +  +  +I+G+ R   ++ G  L DE+      P +  + 
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYR 883

Query: 442 ILINALCKENRLNDARRFLKQLK--WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ILI++ CK  RL  A    K++    +       +Y+ +I+    A  VD+A  + A+M 
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           ++   P+   F  L+ G     R  EA+ +
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 195/359 (54%), Gaps = 4/359 (1%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL + +   +T +   + SL+  L + N  ++A+ +F +   +  +PD + + ++I  L 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +I ++  A  +F  M   GC PD VTY  L+  L +  +  +GH++ +E+  K   SP++
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH-SPEL 119

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY +V++GYCK G++D+A  +   +   G  PS   ++ LIDG  K      A  + E 
Sbjct: 120 VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE- 178

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
            ++ G + DV+ ++S I G C+ G+L++   +  +M     +P+  ++ ++I +LCK+NR
Sbjct: 179 -MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNR 237

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK-PDKVTFT 511
           +++A+  + Q      +P   +   ++DG CK+  V+EA VI+  M E   + P  VT++
Sbjct: 238 VSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYS 297

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +I G C   R+ +A  +  KM R GC PD +T  ++I    K G  +EA  + QR  E
Sbjct: 298 AVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 356



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 184/377 (48%), Gaps = 4/377 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++R LCE+   +    +F  M      P++ +    +    +  K D A     Q 
Sbjct: 16  TFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQM 75

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y  L+++L K    ++   +F+E       P+  T+  ++ G  + G +
Sbjct: 76  VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRI 135

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      +   G SP    Y+TLI GLC+ +      EL +      +   DV+ YTS
Sbjct: 136 DQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGDVQ---DVIVYTS 192

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            ISG CK GK+D+A  ++ +M   G  P  V++NV+I    K   +  A+ + ++ +   
Sbjct: 193 FISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERK 252

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRLNDA 456
            +P V   + L+DG C++ ++ +   + + M +  + +P+V T++ +I+ LCK +RL+DA
Sbjct: 253 CMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDA 312

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L++++    VP    Y  +ID FCK G +DEA  +   M E+ C  D V + ILI G
Sbjct: 313 YIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRG 372

Query: 517 HCMKGRMVEAISIFNKM 533
           +C   ++ EAI++  +M
Sbjct: 373 YCRAAKVDEAIAMIEEM 389



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 41/313 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ SL +    +    +F+ M S GH P        V+   +AG+ D A  L+ + 
Sbjct: 86  TYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRL 145

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIG 275
           +    + S  +Y++L++ L K +  +EA    +E F + +    D   +   I GL + G
Sbjct: 146 KGTGRSPSGSLYSTLIDGLCKHDRHEEA----RELFEMAAGDVQDVIVYTSFISGLCKAG 201

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK---------- 325
           ++ +A      M   GC+PD V+YN +I  LC+ N V+   EL+ +   +          
Sbjct: 202 KLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCT 261

Query: 326 -------------------------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
                                     + +P VVTY++VI G CK  ++D A  +  +M  
Sbjct: 262 VLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRR 321

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G  P  VT+  +ID F KVG +  A  + +RM   G   DVV ++ LI GYCR  ++++
Sbjct: 322 AGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDE 381

Query: 421 GLKLCDEMKGKNL 433
            + + +EM G+ +
Sbjct: 382 AIAMIEEMAGRGI 394



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 91/179 (50%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M + G  P +VTF SLI   C     N+ L++  +M    + P+ + +T++I  LCK N+
Sbjct: 5   MKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 64

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L+ A  + +Q+  +  +P    Y  ++    KA   ++ + I  EM  K   P+ VT+  
Sbjct: 65  LDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 124

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           ++ G+C  GR+ +A+S+  ++   G +P     ++LI  L K     EA  + + A+ D
Sbjct: 125 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAAGD 183


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 218/437 (49%), Gaps = 23/437 (5%)

Query: 156 FKTYNLVMRSLC---EMG--LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +  YN+++  +C   E G  + D  +  +  M   G + N   I  F       GK + A
Sbjct: 147 YVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKA 206

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             ++ +         T  Y+ ++  L   +  ++A  +F+E  R    PD + +  LI  
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             + G +++A  +F +M   GC+P++VTY  LI    +  +V++ +E+  E+      +P
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY-EMMLSKGCTP 325

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK-----------------PSAVTFNVL 373
           ++VTYT++I G CK GK++KA+ IY  M    ++                 P+  T+  L
Sbjct: 326 NIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGAL 385

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +DG  K   +  A  + + M   G  P+ V + +LIDG C+ G+L++  ++   M     
Sbjct: 386 VDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGY 445

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            PNVYT++ LI+ L K+ RL+ A + L ++  N   P   +Y  +IDG CK G  DEA  
Sbjct: 446 DPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 505

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++  MEEK C P+ VT+T +I G    GR+ + + +  +M   GCAP+ +T   LI+   
Sbjct: 506 LMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCC 565

Query: 554 KGGMPNEAFRIMQRASE 570
             G+ +EA ++++   +
Sbjct: 566 STGLLDEAHKLLEEMKQ 582



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 201/435 (46%), Gaps = 23/435 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LCE  L +        MR+   LPN       +  C+   K    K +LS   
Sbjct: 45  YTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMI 104

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 S  ++NSL++A  +  +   A  + K+  +   QP    +NILI G+    E  
Sbjct: 105 TEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPG 164

Query: 279 K-----AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           K     A + + +M   G   + V  +     LC + +  + + +++E+  K  F PD  
Sbjct: 165 KDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKG-FIPDTS 223

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+ VI   C   K++KA  ++ EM   GI P    +  LID F K G +  A    + M
Sbjct: 224 TYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P+VVT+++LI  Y ++ ++++  ++ + M  K  +PN+ T+T LI+ LCK  ++
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343

Query: 454 NDARRFLKQLKWNDLV-----------------PKPFMYNPVIDGFCKAGNVDEANVIVA 496
             A +  K +K  ++                  P  F Y  ++DG CKA  V EA  ++ 
Sbjct: 344 EKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLK 403

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  + C+P+ V +  LI G C  G++ EA  +F  ML  G  P+  T +SLI  L K  
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 557 MPNEAFRIMQRASED 571
             + A +++ +  E+
Sbjct: 464 RLDLALKVLSKMLEN 478



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 174/364 (47%), Gaps = 20/364 (5%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
           M  F      ++L K     EA+ +  KE F     PDT  +  +I GL      ++A +
Sbjct: 8   MDEFTLGCFAHSLCKSGKWREALSLLEKEEF----VPDTVLYTKMISGLCEASLFEEAMD 63

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           F   M +  C P+++TY  L+ G     ++ R   +L  +  +  + P    + S++  Y
Sbjct: 64  FLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCY-PSPRIFNSLVHAY 122

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF------GKVGNMVSAEYMRERMLSF 396
           C+ G    A  +  +M  CG +P  V +N+LI G       GK   +  AE     ML  
Sbjct: 123 CRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGK-DVLDLAEKAYGEMLEA 181

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G + + V  S+     C  G+  +   +  EM  K   P+  T++ +I  LC  +++  A
Sbjct: 182 GVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKA 241

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  +++K N + P  ++Y  +ID FCKAG +++A     EME   C P+ VT+T LI  
Sbjct: 242 FQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHA 301

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
           +    ++ +A  ++  ML  GC P+ +T  +LI  L K G   +A   ++IM++    +N
Sbjct: 302 YLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKK----EN 357

Query: 574 LQLP 577
           +++P
Sbjct: 358 VEIP 361



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 171/399 (42%), Gaps = 30/399 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS--------DGHL---------PNSPMIEFFVSS 200
           TY  ++  LC+ G  +    ++  M+         D H          PN       V  
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDG 388

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             +A +   A+ LL          +  +Y++L++   K    DEA  +F         P+
Sbjct: 389 LCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPN 448

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            +T++ LI  L +   +  A +    M    C+P++V Y  +I GLC+V +    ++L+ 
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMV 508

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            ++ K   +P+VVTYT++I G+ K G+++K   +  +M+S G  P+ VT+ VLI+     
Sbjct: 509 MMEEKG-CNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCST 567

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  + E M    +   V  +  +I+G+  N +    L L  E+   +  P    +
Sbjct: 568 GLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVY 625

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPF------MYNPVIDGFCKAGNVDEANVI 494
            +LI+   K  RL  A    ++L        PF      ++  +I+    A   D+A  +
Sbjct: 626 RVLIDNFIKAGRLEIALELNEELSSFS----PFSAANQNIHITLIENLSLAHKADKAFEL 681

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            A+M  +   P+      LI G     R  EA+ + + +
Sbjct: 682 YADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 128/322 (39%), Gaps = 47/322 (14%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M + G   D  T       LC+  +      LL+    K EF PD V YT +ISG C+  
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE----KEEFVPDTVLYTKMISGLCEAS 56

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
             ++A      M +    P+ +T+ +L+ G      +   + +   M++ G  P    F+
Sbjct: 57  LFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFN 116

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE---------------- 450
           SL+  YCR+G      KL  +M      P    + ILI  +C                  
Sbjct: 117 SLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYG 176

Query: 451 ---------NRLN---------------DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
                    N++N                A   ++++     +P    Y+ VI   C A 
Sbjct: 177 EMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNAS 236

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            V++A  +  EM+     PD   +T LI   C  G + +A + F++M R GCAP+ +T  
Sbjct: 237 KVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYT 296

Query: 547 SLISCLLKG---GMPNEAFRIM 565
           +LI   LK       NE + +M
Sbjct: 297 ALIHAYLKSRKVSKANEVYEMM 318


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 203/383 (53%), Gaps = 17/383 (4%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AGK + A  ++ +         T  Y+ ++  L   +  D A  +F+E    +  PD +T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           + ILI    ++G +++A ++F +M   GC+P++VTY  LI    +  +++  +EL  E+ 
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF-EMM 576

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM---------------NSCGIK-PSA 367
                 P+VVTYT++I G+CK G+++KA  IY  M               +   I+ P+ 
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T+  L+DG  K   +  A  + + M   G  P+ + + +LIDG+C+ G+L++   +  +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  +   PNVYT++ LI+ L K+ RL+ A + L ++  N   P   +Y  +IDG CK G 
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            DEA  +++ MEEK C P+ VT+T +I G    G++ + + +  +M   GCAP+ +T   
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 548 LISCLLKGGMPNEAFRIMQRASE 570
           LI+     G+ ++A +++    +
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQ 839



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 208/430 (48%), Gaps = 25/430 (5%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           EKL  L+ LE+ ++     L    +  ++VN+S        NL  R LC  G  +    +
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVV-LNKVNVS--------NLA-RCLCGAGKFEKAYSI 467

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
              M S G +P++      +     A K D A  L  + +   V    F Y  L+++  K
Sbjct: 468 IREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCK 527

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                +A   F E  R    P+  T+  LI    +  ++  A E F  M S GC P++VT
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEF---------------SPDVVTYTSVISGYC 343
           Y  LI G C+  ++ +  ++   ++  ++                 P++ TY +++ G C
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K  K+ +A  + + M+  G +P+ + ++ LIDGF KVG +  A+ +  +M   GY P+V 
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+SSLID   ++ +L+  LK+   M   + +PNV  +T +I+ LCK  + ++A R +  +
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM 767

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +     P    Y  +IDGF KAG VD+   ++ +M  K C P+ VT+ +LI   C  G +
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLL 827

Query: 524 VEAISIFNKM 533
            +A  + ++M
Sbjct: 828 DDAHQLLDEM 837



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 203/454 (44%), Gaps = 61/454 (13%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LCE  L +        MRS   +PN       +  C+R  +    K +LS   
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG-------- 270
                 S  ++NSL++A  +  +   A  + K+      QP    +NILI G        
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421

Query: 271 ---------------------------------LSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                                            L   G+ +KA+    +M S G  PD  
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ +I  LC  ++V     L +E+K  +   PDV TYT +I  +CK+G + +A   ++E
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMK-SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VT+  LI  + K   M SA  + E MLS G +P+VVT+++LIDG+C++GQ
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  ++   M+G    P+V  +           +++D          N   P  F Y  
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYF----------KIDDG---------NIRDPNIFTYGA 641

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG CKA  V EA  ++  M  + C+P+ + +  LI G C  G++ EA  +F KM   G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             P+  T +SLI  L K    + A +++ R  E+
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/557 (24%), Positives = 234/557 (42%), Gaps = 73/557 (13%)

Query: 83  KEVNYRCSNEFWFVKVVCTLLLRSS-----YLSDTCARYLCEKLSPLNSLEVIKRLDNPK 137
           K V+ RCSN+     V+ + ++R++     + +    R   EKL+    ++V+  + NP+
Sbjct: 88  KSVSGRCSND----AVLISDVIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLSLVKNPE 143

Query: 138 LGLKFLEFSRVNLSLNHSFKTY-----------------------------------NLV 162
           LG+KF  ++   +   H+   Y                                   N++
Sbjct: 144 LGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVL 203

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +R  C  GL +        ++  G+ P+       V   + A + D A  +  +      
Sbjct: 204 IRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF 263

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
            M  +     ++ L K     EA+ +  KE F+L    DT  +  +I GL      ++A 
Sbjct: 264 NMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL----DTVIYTQMISGLCEASLFEEAM 319

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +F   M S  C P++VTY  L+ G  R  ++ R   +L  +  +  + P    + S+I  
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCY-PSRRIFNSLIHA 378

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YC+ G    A  +  +M  CG +P  V +N+LI G      + S + +     ++G + D
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 402 V------VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                  V  S+L    C  G+  +   +  EM  K   P+  T++ +I  LC  +++++
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    +++K N +VP  F Y  +ID FCK G + +A     EM    C P+ VT+T LI 
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +    +M  A  +F  ML  GC P+ +T  +LI    K G   +A +I  R        
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR-------- 610

Query: 576 LPSWKKAVPLRTNTDIP 592
                    +R N DIP
Sbjct: 611 ---------MRGNADIP 618



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 175/390 (44%), Gaps = 21/390 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI-----------EFFVSSCIRAGK 206
           TY  ++   C+ G  +    ++  MR +  +P+  M              F    +  G 
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 207 CDA-----AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           C A     A+ LL          +  +Y++L++   K    DEA  +F +       P+ 
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T++ LI  L +   +  A +    M    C+P+++ Y  +I GLC+V +    + L+  
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ K    P+VVTYT++I G+ K GK+DK   +  +M + G  P+ VT+ VLI+     G
Sbjct: 767 MEEKG-CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + + M    +   +  +  +I+G+ R   ++ G  L DE+      P +  + 
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAVPIIPAYR 883

Query: 442 ILINALCKENRLNDARRFLKQLK--WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ILI++ CK  RL  A    K++    +       +Y+ +I+    A  VD+A  + A+M 
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           ++   P+   F  L+ G     R  EA+ +
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 199/382 (52%), Gaps = 5/382 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +Y  ++  +C++G  D+   +    + DG L  PN  M    + +  +      A GL S
Sbjct: 166 SYATLINGVCKIG--DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 223

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     ++     Y++L+     +    EA+ +  E       P+ +T+NIL+  L + G
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +VK+A      M      PD++TY+TL+ G   V EV +   +   +      +PDV TY
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG-VTPDVHTY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I+G+CK   +D+A  ++ EM+   + P  VT++ LIDG  K G +     + + M  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRD 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   DV+T+SSLIDG C+NG L++ + L ++MK + + PN++TFTIL++ LCK  RL D
Sbjct: 403 RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKD 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+   + L         + YN +I+G CK G ++EA  ++++ME+  C P+  TF  +II
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIII 522

Query: 516 GHCMKGRMVEAISIFNKMLRIG 537
               K    +A  +  +M+  G
Sbjct: 523 ALFKKDENDKAEKLLRQMIARG 544



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 211/419 (50%), Gaps = 11/419 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY-----MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           T N+++   C MG     Q+ F +     +   G+ P++  +   +      G+   A  
Sbjct: 96  TLNILINCFCHMG-----QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              +       ++   Y +L+N + K  +   A+ + ++     ++P+   ++ +I  L 
Sbjct: 151 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC 210

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   V +A+  F +M   G S D+VTY+TLI G C   ++     LL E+  K+  +P+V
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT-INPNV 269

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  ++   CK GK+ +A  +   M    +KP  +T++ L+DG+  V  +  A+++   
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PDV T++ LI+G+C+N  +++ L L  EM  KN+ P + T++ LI+ LCK  R
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +      + +++          Y+ +IDG CK G++D A  +  +M+++  +P+  TFTI
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           L+ G C  GR+ +A  +F  +L  G   +  T N +I+   K G+  EA  ++ +  ++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDN 508



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 208/410 (50%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +++ LC  G         D + + G   N       ++   + G    A  LL + 
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI 190

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  MY+++++AL K     EA  +F E        D  T++ LI G    G++
Sbjct: 191 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A     +M     +P++ TYN L+  LC+  +V     +L  V  K+   PDV+TY++
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL-AVMLKACVKPDVITYST 309

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY  + ++ KA  ++N M+  G+ P   T+ +LI+GF K   +  A  + + M    
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P +VT+SSLIDG C++G++     L DEM+ +    +V T++ LI+ LCK   L+ A 
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++K  ++ P  F +  ++DG CK G + +A  +  ++  K    +  T+ ++I GH
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +G + EA+++ +KM   GC P+  T  ++I  L K    ++A +++++
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 539



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 213/425 (50%), Gaps = 4/425 (0%)

Query: 144 EFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           +F+R+ L + H+     +N ++ S  +M  + +   +   +   G  P+   +   ++  
Sbjct: 46  QFNRM-LCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCF 104

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G+      +L++         T   N+L+  L  +    +A++   +      Q + 
Sbjct: 105 CHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            ++  LI G+ +IG+ + A +    +      P++  Y+T+I  LC+   V+  + L  E
Sbjct: 165 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 224

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K   S DVVTY+++I G+C  GK+ +A G+ NEM    I P+  T+N+L+D   K G
Sbjct: 225 MTVKG-ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ +   ML     PDV+T+S+L+DGY    ++ +   + + M    ++P+V+T+T
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           ILIN  CK   +++A    K++   ++VP    Y+ +IDG CK+G +     ++ EM ++
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDR 403

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               D +T++ LI G C  G +  AI++FNKM      P+  T   L+  L KGG   +A
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463

Query: 562 FRIMQ 566
             + Q
Sbjct: 464 QEVFQ 468



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 175/379 (46%), Gaps = 36/379 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N +L++  K  +   AV +         QPD  T NILI     +G++   F     + 
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD VT NTLI GLC   +V +      ++     F  + V+Y ++I+G CK+G  
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL-LAQGFQLNQVSYATLINGVCKIGDT 180

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  +  +++    KP+   ++ +ID   K   +  A  +   M   G   DVVT+S+L
Sbjct: 181 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK------- 461
           I G+C  G+L + + L +EM  K ++PNVYT+ IL++ALCKE ++ +A+  L        
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300

Query: 462 -----------------------QLKWNDL-----VPKPFMYNPVIDGFCKAGNVDEANV 493
                                  Q  +N +      P    Y  +I+GFCK   VDEA  
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALN 360

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  EM +K   P  VT++ LI G C  GR+     + ++M   G   D IT +SLI  L 
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLC 420

Query: 554 KGGMPNEAFRIMQRASEDQ 572
           K G  + A  +  +  + +
Sbjct: 421 KNGHLDRAIALFNKMKDQE 439



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 134/283 (47%), Gaps = 1/283 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N +  TYN+++ +LC+ G     + V   M      P+       +       +   A
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + + +      VT     Y  L+N   K    DEA+ +FKE  +    P   T++ LI G
Sbjct: 324 QHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDG 383

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +   ++   +M   G   D++TY++LI GLC+   + R   L  ++K   E  P
Sbjct: 384 LCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK-DQEIRP 442

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           ++ T+T ++ G CK G++  A  ++ ++ + G   +  T+NV+I+G  K G +  A  M 
Sbjct: 443 NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 502

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +M   G +P+  TF ++I    +  + ++  KL  +M  + L
Sbjct: 503 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 193/378 (51%), Gaps = 37/378 (9%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           +  +N+L+N   KQ    +   + +       QP+  ++N L++GL ++    +A E   
Sbjct: 10  SVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVR 69

Query: 286 DMGSFG--CSPDIVTYNTLISGLCRVNEVARGHELLKEV--------------------- 322
           DM S G   +PD+VTY+TL+SG C+  +V    ELLKEV                     
Sbjct: 70  DMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCK 129

Query: 323 -------------KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
                          ++   P ++T+ ++ISG C+   ++ A  +  +M + G+K   VT
Sbjct: 130 SARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVT 189

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N L+DG  K G +  AE + ERM + G  PDVV +SS + G C++G++    ++ ++M+
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMR 249

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM-YNPVIDGFCKAGNV 488
             +  PNV T+  +++ LCK  +++ A   ++Q+  +D      + Y+ V+DG CK G  
Sbjct: 250 DSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  ++  M    C+PD VT++ L+ G C  G++ EA+    +M   GC P+ +T  SL
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369

Query: 549 ISCLLKGGMPNEAFRIMQ 566
           +  L   G   EA R+++
Sbjct: 370 VHGLCSCGRLAEAERMVE 387



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 208/416 (50%), Gaps = 9/416 (2%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN ++  LC++   H++ ++V D +   G   P+       +S   +AGK + ++ LL 
Sbjct: 47  SYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLK 106

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +     MY  ++ +L K     EA+ + +E  R    P   TFN LI G  R  
Sbjct: 107 EVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK 166

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            ++ A      M + G   D+VTYNTL+ GLC+   +    +LL+ +K  S  +PDVV Y
Sbjct: 167 NLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK-ASGCAPDVVAY 225

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +S + G CK GK+  A  +  +M      P+ VT+N ++DG  K G + +A  M E+M S
Sbjct: 226 SSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285

Query: 396 F-GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   +VV +S+++DG C+ G+  +   + + M      P+V T++ L+N LCK  ++ 
Sbjct: 286 SDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIE 345

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-----CKPDKVT 509
           +A   ++++      P    Y  ++ G C  G + EA  +V EM         C P   T
Sbjct: 346 EAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVST 405

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +  LI G C  GR+ +A+  F +M   GC PD ++ ++++  L + G   +A  I+
Sbjct: 406 YNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 203/384 (52%), Gaps = 11/384 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++   C+ G  +  + +   + S G  P++ M    V+S  ++ +   A  LL + 
Sbjct: 84  TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEM 143

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   +N+L++   ++ N + A  + ++      + D  T+N L+ GL + G +
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRL 203

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M + GC+PD+V Y++ + GLC+  +V   H++L++++  S   P+VVTY +
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMR-DSHHDPNVVTYNT 262

Query: 338 VISGYCKLGKMDKATGIYNEMNS---CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           ++ G CK GK+D A  +  +M S   CG+  + V ++ ++DG  K+G    A  + E M 
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGL--NVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PDVVT+SSL++G C+ G++ + ++   EM  +   PN  T+  L++ LC   RL 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 455 DARRFLKQLKWNDLV-----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +A R ++++           P    YN +I G CKAG +D+A      M  + C PD V+
Sbjct: 381 EAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 510 FTILIIGHCMKGRMVEAISIFNKM 533
           ++ ++ G    GR ++A  I +++
Sbjct: 441 YSTIVEGLARSGRALQAEMILSEV 464



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 186/356 (52%), Gaps = 7/356 (1%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G  T     Y++LL+   K    +E+  + KE      +PD   +  ++  L +   +
Sbjct: 74  RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARL 133

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E   +M   GC P ++T+NTLISG CR   +     LL+++   S    DVVTY +
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA-ASGVKADVVTYNT 192

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK G++ +A  +   M + G  P  V ++  + G  K G ++ A  + E+M    
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSH 252

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLNDA 456
           + P+VVT+++++DG C++G+++  L++ ++M   +    NV  ++ +++ LCK  R  +A
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R  ++ +      P    Y+ +++G CKAG ++EA   V EM  + CKP+ VT+  L+ G
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372

Query: 517 HCMKGRMVEAISIFNKMLRIG-----CAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C  GR+ EA  +  +M   G     C P   T N+LI  L K G  ++A +  QR
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 179/345 (51%), Gaps = 37/345 (10%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P++ TFN L+ G S+ G           M +    P++V+YN L+ GLC++       EL
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 319 LKE-VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA---------- 367
           +++ +      +PD+VTY++++SGYCK GK++++  +  E+ S G++P A          
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 368 -------------------------VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
                                    +TFN LI G  +  N+  A+ + ++M + G   DV
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VT+++L+DG C+ G+L +  +L + MK    +P+V  ++  +  LCK  ++ DA + L+Q
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTILIIGHCMKG 521
           ++ +   P    YN ++DG CK+G +D A  ++ +M     C  + V ++ ++ G C  G
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           R  EA S+   M R GC PD +T +SL++ L K G   EA   ++
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 149/313 (47%), Gaps = 7/313 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C     +    +   M + G   +       +    +AG+   A+ LL + 
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +          Y+S +  L K     +A  + ++    +  P+  T+N ++ GL + G++
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKI 273

Query: 278 KKAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             A E    M S  GC  ++V Y+T++ GLC++        ++ E   ++   PDVVTY+
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVM-EAMARAGCRPDVVTYS 332

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+++G CK GK+++A     EM   G KP+AVT+  L+ G    G +  AE M E M S 
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392

Query: 397 GYL-----PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           G       P V T+++LI G C+ G+++  LK    M+ +   P+  +++ ++  L +  
Sbjct: 393 GGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452

Query: 452 RLNDARRFLKQLK 464
           R   A   L +++
Sbjct: 453 RALQAEMILSEVR 465



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 151/288 (52%), Gaps = 4/288 (1%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   GC P+ VT+N L++G  +         LL+ +  + +  P+VV+Y  ++ G CKL 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLE 59

Query: 347 KMDKATGIYNEMNSCGIK--PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +  +A  +  +M S G +  P  VT++ L+ G+ K G +  +  + + ++S G  PD + 
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++ ++   C++ +L + L+L +EM      P + TF  LI+  C+E  L  A   L+++ 
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            + +      YN ++DG CKAG + EA  ++  M+   C PD V ++  + G C  G+++
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM-QRASED 571
           +A  +  +M      P+ +T N+++  L K G  + A  +M Q AS D
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 135/246 (54%), Gaps = 2/246 (0%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+ VT+ ++++G+ K G+      +   M +  I+P+ V++N L++G  K+     AE +
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 390 RERMLSFG--YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              M+S G    PD+VT+S+L+ GYC+ G++ +  +L  E+  + L P+   +T ++ +L
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  RL +A   L+++      P    +N +I G C+  N++ A+ ++ +M     K D 
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+  L+ G C  GR+ EA  +  +M   GCAPD +  +S +  L K G   +A +++++
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247

Query: 568 ASEDQN 573
             +  +
Sbjct: 248 MRDSHH 253


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 217/447 (48%), Gaps = 16/447 (3%)

Query: 125 NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
           ++++ I+R  + +L L              S K YN  +RSL    + + +  V+  +  
Sbjct: 131 DAIQAIRRTGSARLAL--------------SPKCYNFALRSLARFDMTEYMGRVYSQLVQ 176

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           DG LP++      + S  + G    A         G +   TF  N+L+    +     +
Sbjct: 177 DGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRK 236

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A ++F     +  Q + +++ ILIQGL     V++A   F  M   GCSP++  +  LIS
Sbjct: 237 ACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLIS 296

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+   V     LL +   ++   P V+TY ++I GY KLG+M+ A  I   M   G  
Sbjct: 297 GLCKSGRVGDAR-LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 355

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P   T+N LI G         AE +    +  G+ P VVTF++LI+GYC   + +  L++
Sbjct: 356 PDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 414

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            ++M       ++  F  LIN+L K++RL +A+  L ++  N LVP    Y  +IDG+CK
Sbjct: 415 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 474

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           +G VD A  ++  ME   C+P+  T+  L+ G     ++ +A+++  KM + G  P+ IT
Sbjct: 475 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASED 571
             +L+         + AFR+ +   ++
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQN 561



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 201/410 (49%), Gaps = 5/410 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    ++ +++ + ++ +G  P        ++    A K D A  + ++ 
Sbjct: 360 TYNTLIYGLCDQKTEEAEELLNNAVK-EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +  +   ++  L+N+L+K++   EA  +  E       P+  T+  +I G  + G+V
Sbjct: 419 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 478

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    M   GC P+  TYN+L+ GL +  ++ +   LL +++ K    P+V+TYT+
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ-KDGIIPNVITYTT 537

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C     D A  ++  M   G+KP    + VL D   K G    AE     ++  G
Sbjct: 538 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKG 594

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
                V +++LIDG+ + G  +    L + M  +  +P+ YT+++L++ALCK+ RLN+A 
Sbjct: 595 VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEAL 654

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L Q+    +    F Y  +ID   + G  D A  +  EM     KP   T+T+ I  +
Sbjct: 655 PILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSY 714

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +GR+ +A  +  KM R G APD +T N LI      G  + AF  ++R
Sbjct: 715 CKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 764



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 180/361 (49%), Gaps = 4/361 (1%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            ++S I+  +   AK LL++     +  +   Y S+++   K    D A+ + K   R  
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            QP+ WT+N L+ GL +  ++ KA      M   G  P+++TY TL+ G C  ++     
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            L  E+  ++   PD   Y  +    CK G+ ++A   Y+ +   G+  + V +  LIDG
Sbjct: 553 RLF-EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDG 608

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K GN   A  + ERM+  G  PD  T+S L+   C+  +LN+ L + D+M  + +   
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           ++ +TILI+ + +E + + A+R   ++  +   P    Y   I+ +CK G +++A  ++ 
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +ME +   PD VT+ ILI G    G +  A S   +M+   C P+  T   L+  LLKG 
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788

Query: 557 M 557
           +
Sbjct: 789 L 789



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 195/444 (43%), Gaps = 69/444 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y ++++ LCE        V+F  M+ DG  PN     F +S   ++G+   A+      
Sbjct: 255 SYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR------ 308

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                         LL   + QN                  P   T+N +I G S++G +
Sbjct: 309 --------------LLFDAMPQNGV---------------VPSVMTYNAMIVGYSKLGRM 339

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   GC PD  TYNTLI GLC   +     ELL     K  F+P VVT+T+
Sbjct: 340 NDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNA-VKEGFTPTVVTFTN 397

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC   K D A  + N+M S   K     F  LI+   K   +  A+ +   + + G
Sbjct: 398 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 457

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+V+T++S+IDGYC++G+++  L++   M+     PN +T+  L+  L K+ +L+ A 
Sbjct: 458 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 517

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L +++ + ++P    Y  ++ G C   + D A  +   ME+   KPD+  + +L    
Sbjct: 518 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 577

Query: 518 CMKGRMVEAIS--------------------------------IFNKMLRIGCAPDDITV 545
           C  GR  EA S                                +  +M+  GC PD  T 
Sbjct: 578 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 637

Query: 546 NSLISCLLKGGMPNEAFRIMQRAS 569
           + L+  L K    NEA  I+ + S
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMS 661



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 20/424 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++  C+    D+   +F+ M  +G  P+         +  +AG+ + A   +   
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--V 591

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G V ++   Y +L++   K  N D A  + +        PD++T+++L+  L +   +
Sbjct: 592 RKG-VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 650

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G    I  Y  LI  + R  +      +  E+   S   P   TYT 
Sbjct: 651 NEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT-SSGHKPSATTYTV 709

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I+ YCK G+++ A  +  +M   G+ P  VT+N+LIDG G +G +  A    +RM+   
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 769

Query: 398 YLPDVVTFSSLID-------GYCRNG---------QLNQGLKLCDEMKGKNLSPNVYTFT 441
             P+  T+  L+         Y R+          +L+   +L + M    L+P V T++
Sbjct: 770 CEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYS 829

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI   CK  RL +A   L  +    L P   +Y  +I   C     ++A   V+ M E 
Sbjct: 830 SLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSEC 889

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             +P   ++ +L++G C +G   +  S+F  +L +G   D++    L   LLK G  +  
Sbjct: 890 GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDIC 949

Query: 562 FRIM 565
           F+++
Sbjct: 950 FQML 953



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 174/401 (43%), Gaps = 22/401 (5%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + + + ++G +PN       +    ++GK D A  +L          + + YNSL+  LV
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K     +A+ +  +  +    P+  T+  L+QG     +   AF  F  M   G  PD  
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            Y  L   LC+       +  +     +   +   V YT++I G+ K G  D A  +   
Sbjct: 569 AYAVLTDALCKAGRAEEAYSFI----VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIER 624

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P + T++VL+    K   +  A  + ++M   G    +  ++ LID   R G+
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   ++ +EM      P+  T+T+ IN+ CKE RL DA   + +++   + P    YN 
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG-----RMVEAISIFN- 531
           +IDG    G +D A   +  M    C+P+  T+  L++ H +KG     R V+   ++N 
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC-LLLKHLLKGNLAYVRSVDTSGMWNL 803

Query: 532 -----------KMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                      +M++ G  P   T +SLI+   K G   EA
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 132/305 (43%), Gaps = 17/305 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++  +   G HD  + +++ M S GH P++     F++S  + G+ + A+ L+ +  
Sbjct: 672 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 731

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ--------- 269
              V      YN L++        D A    K       +P+ WT+ +L++         
Sbjct: 732 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 791

Query: 270 -------GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
                  G+  + E+   ++    M   G +P + TY++LI+G C+   +     LL  +
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 851

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K   SP+   YT +I   C     +KA    + M+ CG +P   ++ +L+ G    G+
Sbjct: 852 CGKG-LSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 910

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
               + +   +L  GY  D V +  L DG  + G ++   ++   M+ +    +  T+ +
Sbjct: 911 FEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYAL 970

Query: 443 LINAL 447
           + N +
Sbjct: 971 VTNKM 975


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 215/416 (51%), Gaps = 46/416 (11%)

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           DG   + P +    S+ +R      +  L S+ +   + +ST   + LL+AL     +  
Sbjct: 413 DGAPSSLPNLLLTASAAVRPHA--TSLRLYSRMKSLSLPISTASLHPLLSAL----PSAP 466

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  +F + FRL     T TFNI+++ L   G+  +A E    M      P+ VTYNT+I+
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 522

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-I 363
           G C    V    ++++E++ +   +P+  TY +VISG+CK+G++D+A  +++EM + G +
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP AV +N LI G+   G + +A   R+RM+  G    V T++ L+     +G+  +  +
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRL--------NDARRFLK-------------- 461
           L +EM GK L+P+V+T+ ILIN  CKE  +        N +RR ++              
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 462 ---QLKWND----------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              Q++  D          + P   +YN +I+    +GN+D A  I+ EME+KR  PD V
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T+  L+ G C+ GR+ EA  + ++M   G  PD +T N+LIS     G   +A RI
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 818



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 204/413 (49%), Gaps = 9/413 (2%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F +  R+ L L  +  T+N+++R LC  G       +   M      PN+      ++  
Sbjct: 471 FADMFRLRLPLCTT--TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGF 524

Query: 202 IRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQP 259
              G+  AA  ++ + R  G +  + + Y ++++   K    DEAV +F E   +   +P
Sbjct: 525 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 584

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +   +N LI G    G++  A  +   M   G +  + TYN L+  L         +EL+
Sbjct: 585 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 644

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  K   +PDV TY  +I+G+CK G + KA  I+  M+  G++ + VT+  LI    K
Sbjct: 645 EEMGGKG-LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 703

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + + +  +  G  PD+V +++LI+ +  +G +++  ++  EM+ K ++P+  T
Sbjct: 704 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L+  LC   R+++AR+ + ++    + P    YN +I G+   G+V +A  I  EM 
Sbjct: 764 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 823

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            K   P  +T+  LI G C  G+  +A ++  +M+  G  PDD T  SLI  L
Sbjct: 824 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 189/362 (52%), Gaps = 1/362 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           ++G  D A GLL +     V ++   YNSLL++  +Q N D    + KE      +P   
Sbjct: 160 KSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVG 219

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL+ GLSR G++ K    + +M     + D+  Y+ +I+  CR   V R  E+  E 
Sbjct: 220 TYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDEC 279

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                  P+  TY ++I+G+CK+G+++ A  +  +M   G+  + + FN +IDG+ + G 
Sbjct: 280 -VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGM 338

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  ++  M   G   D+ T+++L  G CR  ++    KL   M  K ++PN  ++T 
Sbjct: 339 VEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTT 398

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+   KE  + +ARR  + ++     P    YN +IDG+ K G++ EA     EME+K 
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKG 458

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD  T+  L+ GHC+ G++  A+ +F +M   G  P+ +   +L+S L K G   EAF
Sbjct: 459 LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518

Query: 563 RI 564
           ++
Sbjct: 519 QL 520



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 172/371 (46%), Gaps = 3/371 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  R  + LN     YN ++ S       D+V  +   M + G  P        V    R
Sbjct: 173 ELPRHGVGLNAC--CYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSR 230

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG     + +  + +   V    + Y++++NA  +  N   A  +F E      +P+  T
Sbjct: 231 AGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERT 290

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  LI G  +IG+++ A     DM   G   + + +NT+I G CR   V +  E +K V 
Sbjct: 291 YGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALE-IKAVM 349

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K     D+ TY ++  G C++ +M+ A  + + M   G+ P+ V++  LI    K G+M
Sbjct: 350 EKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDM 409

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           V A  +   M   G  P VVT++ +IDGY +NG + +  +   EM+ K L P++YT+  L
Sbjct: 410 VEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGL 469

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           ++  C   +++ A R  +++K     P    Y  ++ G  K G  +EA  +  +M     
Sbjct: 470 VHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGL 529

Query: 504 KPDKVTFTILI 514
            PD   +++L+
Sbjct: 530 TPDDTLYSVLV 540



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 155/319 (48%), Gaps = 3/319 (0%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           D  K+   + E  R N++ +  F  Y+ V+ + C  G       VFD     G  PN   
Sbjct: 233 DISKVEAVYDEMKRKNVAGDVYF--YSAVINAYCRGGNVRRASEVFDECVGHGVEPNERT 290

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               ++   + G+ +AA+ LL+  +   V  +  ++N++++   +    ++A+ +     
Sbjct: 291 YGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVME 350

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           ++  + D +T+N L  GL R+  ++ A +  + M   G +P+ V+Y TLIS   +  ++ 
Sbjct: 351 KMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMV 410

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               L ++++ K    P VVTY  +I GY K G + +A     EM   G+ P   T+  L
Sbjct: 411 EARRLFRDMEGKGS-RPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGL 469

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           + G    G +  A  + E M   G  P+VV +++L+ G  + G+  +  +L D+M    L
Sbjct: 470 VHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGL 529

Query: 434 SPNVYTFTILINALCKENR 452
           +P+   +++L+ +L  ++R
Sbjct: 530 TPDDTLYSVLVGSLHTDSR 548



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 129/238 (54%)

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           ++ + V+ G+CK G +D A G+ +E+   G+  +A  +N L+D + +  N  +   + + 
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M + G  P V T++ L+DG  R G +++   + DEMK KN++ +VY ++ +INA C+   
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A     +   + + P    Y  +I+GFCK G ++ A +++A+M+ +    +++ F  
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +I G+C  G + +A+ I   M ++G   D  T N+L   L +     +A +++   +E
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE 386


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 193/380 (50%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++R+LC+ G       V D        P+       + +  +      A  LL + 
Sbjct: 218 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN L+N + K+   DEA+           QP+  T NI+++ +   G  
Sbjct: 278 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   DM   GCSP +VT+N LI+ LCR   + R  ++L+++      +P+ ++Y  
Sbjct: 338 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNP 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+CK  KMD+A    + M S G  P  VT+N L+    K G +  A  +  ++ S G
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P ++T++++IDG  + G+  + +KL DEM+ K L P++ T++ L++ L +E ++++A 
Sbjct: 457 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 516

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +F   L+   + P    YN ++ G CK+   D A   +A M  KRCKP + T+TILI G 
Sbjct: 517 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 576

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G   EA+ + N++   G
Sbjct: 577 AYEGLAKEALDLLNELCSRG 596



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 188/385 (48%), Gaps = 4/385 (1%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
            + M   G +P+       +    R GK   A  ++              YN L++   K
Sbjct: 137 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 196

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
               D A+ +     R+   PD  T+N +++ L   G++K+A E         C PD++T
Sbjct: 197 SGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 253

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y  LI   C+ + V +  +LL E++ K    PDVVTY  +I+G CK G++D+A    N M
Sbjct: 254 YTILIEATCKESGVGQAMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNM 312

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
            S G +P+ +T N+++      G  + AE +   ML  G  P VVTF+ LI+  CR G L
Sbjct: 313 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 372

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + + + ++M     +PN  ++  L++  CKE +++ A  +L  +      P    YN +
Sbjct: 373 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 432

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           +   CK G VD A  I+ ++  K C P  +T+  +I G    G+   AI + ++M R G 
Sbjct: 433 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 492

Query: 539 APDDITVNSLISCLLKGGMPNEAFR 563
            PD IT +SL+S L + G  +EA +
Sbjct: 493 KPDIITYSSLVSGLSREGKVDEAIK 517



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 176/335 (52%), Gaps = 4/335 (1%)

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           SL+    +     +A ++ +   +  + PD  T+N+LI G  + GE+  A +    M   
Sbjct: 154 SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN-- 211

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
             +PD+VTYNT++  LC   ++ +  E+L   + + E  PDV+TYT +I   CK   + +
Sbjct: 212 -VAPDVVTYNTILRTLCDSGKLKQAMEVLDR-QLQKECYPDVITYTILIEATCKESGVGQ 269

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  + +EM + G KP  VT+NVLI+G  K G +  A      M S+G  P+V+T + ++ 
Sbjct: 270 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 329

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
             C  G+     KL  +M  K  SP+V TF ILIN LC++  L  A   L+++  +   P
Sbjct: 330 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 389

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               YNP++ GFCK   +D A   +  M  + C PD VT+  L+   C  G++  A+ I 
Sbjct: 390 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 449

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           N++   GC+P  IT N++I  L K G    A +++
Sbjct: 450 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 197/401 (49%), Gaps = 4/401 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++R  C +G       V + +   G +P+       +S   ++G+ D A  +L +     
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM---N 211

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V      YN++L  L       +A+ +     +    PD  T+ ILI+   +   V +A 
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +   +M + G  PD+VTYN LI+G+C+   +    + L  +       P+V+T+  ++  
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG-CQPNVITHNIILRS 330

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C  G+   A  + ++M   G  PS VTFN+LI+   + G +  A  + E+M   G  P+
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            ++++ L+ G+C+  ++++ ++  D M  +   P++ T+  L+ ALCK+ +++ A   L 
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           QL      P    YN VIDG  K G  + A  ++ EM  K  KPD +T++ L+ G   +G
Sbjct: 451 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 510

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           ++ EAI  F+ +  +G  P+ IT NS++  L K    + A 
Sbjct: 511 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAI 551



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 157/314 (50%), Gaps = 1/314 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C+ G  D      + M S G  PN       + S    G+   A+ LLS  
Sbjct: 288 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 347

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + S   +N L+N L +Q     A+ + ++       P++ ++N L+ G  +  ++
Sbjct: 348 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 407

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E+   M S GC PDIVTYNTL++ LC+  +V    E+L ++  K   SP ++TY +
Sbjct: 408 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG-CSPVLITYNT 466

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+GK ++A  + +EM   G+KP  +T++ L+ G  + G +  A      +   G
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +T++S++ G C++ Q ++ +     M  K   P   T+TILI  +  E    +A 
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586

Query: 458 RFLKQLKWNDLVPK 471
             L +L    LV K
Sbjct: 587 DLLNELCSRGLVKK 600


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 11/434 (2%)

Query: 149  NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
            N  L  S  T N V+    E+GL +  + VFD M   G +P+S   +  V  C R GK  
Sbjct: 776  NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 835

Query: 209  AAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
             A   L+      F P   T +      +L AL +    + A++ F++   L  +P+   
Sbjct: 836  EADRWLTGMIQRGFIPDNATCTL-----ILTALCENGLVNRAIWYFRKMIDLGFKPNLIN 890

Query: 264  FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            F  LI GL + G +K+AFE   +M   G  P++ T+  LI GLC+     +   L  ++ 
Sbjct: 891  FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 950

Query: 324  FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                + P+V TYTS+I GYCK  K+++A  +++ M   G+ P+  T+  LI+G  K G+ 
Sbjct: 951  RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 1010

Query: 384  VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
              A  +   M   G++P++ T+++ ID  C+  +  +  +L ++     L  +  T+TIL
Sbjct: 1011 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 1070

Query: 444  INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
            I   CK+N +N A  F  ++          + N +I  FC+   + E+  +   +     
Sbjct: 1071 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 1130

Query: 504  KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             P K T+T +I  +C +G +  A+  F+ M R GC PD  T  SLIS L K  M +EA +
Sbjct: 1131 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 1190

Query: 564  IMQRASEDQNLQLP 577
            + + A  D+ L  P
Sbjct: 1191 LYE-AMIDRGLSPP 1203



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 174/363 (47%), Gaps = 2/363 (0%)

Query: 205  GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
            G+ + A G++   +   +T S+   N +L   V+    + A  +F E       PD+ ++
Sbjct: 762  GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821

Query: 265  NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
             +++ G  R G++++A  +   M   G  PD  T   +++ LC    V R     +++  
Sbjct: 822  KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM-I 880

Query: 325  KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
               F P+++ +TS+I G CK G + +A  +  EM   G KP+  T   LIDG  K G   
Sbjct: 881  DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 940

Query: 385  SAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +  +++ S  Y P+V T++S+I GYC+  +LN+   L   MK + L PNV T+T L
Sbjct: 941  KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 1000

Query: 444  INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
            IN  CK      A   +  +     +P  + YN  ID  CK     EA  ++ +      
Sbjct: 1001 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 1060

Query: 504  KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            + D VT+TILI   C +  + +A++ F +M + G   D    N LI+   +     E+ R
Sbjct: 1061 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 1120

Query: 564  IMQ 566
            + Q
Sbjct: 1121 LFQ 1123



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 182/423 (43%), Gaps = 5/423 (1%)

Query: 148  VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGK 206
            ++L    +   +  ++  LC+ G       + + M  +G  PN       +   C R   
Sbjct: 880  IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 939

Query: 207  CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A +  L   R      +   Y S++    K++  + A  +F         P+  T+  
Sbjct: 940  EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 999

Query: 267  LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
            LI G  + G   +A+E    MG  G  P+I TYN  I  LC+ +     +ELL +  F  
Sbjct: 1000 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA-FSC 1058

Query: 327  EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
                D VTYT +I   CK   +++A   +  MN  G +      N+LI  F +   M  +
Sbjct: 1059 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 1118

Query: 387  EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
            E + + ++S G +P   T++S+I  YC+ G ++  LK    MK     P+ +T+  LI+ 
Sbjct: 1119 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 1178

Query: 447  LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            LCK++ +++A +  + +    L P       +   +CK  +   A +++  +++K     
Sbjct: 1179 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIR- 1237

Query: 507  KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              T   L+   C + ++  A   F K+L    + D +T+ +  +   + G  N    + +
Sbjct: 1238 --TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTE 1295

Query: 567  RAS 569
            R S
Sbjct: 1296 RIS 1298



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 124/236 (52%), Gaps = 5/236 (2%)

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++  + ++G++++A G+  +M + G+ PS++T N +++   ++G +  AE + + M   G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD  ++  ++ G  R+G++ +  +    M  +   P+  T T+++ ALC+   +N A 
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 458 RFLKQLKWNDLVPKPFMYN--PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
            + +++   DL  KP + N   +IDG CK G++ +A  ++ EM     KP+  T T LI 
Sbjct: 874 WYFRKMI--DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 931

Query: 516 GHCMKGRMVEAISIFNKMLRIGC-APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G C +G   +A  +F K++R     P+  T  S+I    K    N A  +  R  E
Sbjct: 932 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 987


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 193/380 (50%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++R+LC+ G       V D        P+       + +  +      A  LL + 
Sbjct: 161 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 220

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN L+N + K+   DEA+           QP+  T NI+++ +   G  
Sbjct: 221 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRW 280

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   DM   GCSP +VT+N LI+ LCR   + R  ++L+++      +P+ ++Y  
Sbjct: 281 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNP 339

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+CK  KMD+A    + M S G  P  VT+N L+    K G +  A  +  ++ S G
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P ++T++++IDG  + G+  + +KL DEM+ K L P++ T++ L++ L +E ++++A 
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 459

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +F   L+   + P    YN ++ G CK+   D A   +A M  KRCKP + T+TILI G 
Sbjct: 460 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 519

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G   EA+ + N++   G
Sbjct: 520 AYEGLAKEALDLLNELCSRG 539



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 188/385 (48%), Gaps = 4/385 (1%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
            + M   G +P+       +    R GK   A  ++              YN L++   K
Sbjct: 80  LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 139

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
               D A+ +     R+   PD  T+N +++ L   G++K+A E         C PD++T
Sbjct: 140 SGEIDNALQVLD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 196

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y  LI   C+ + V +  +LL E++ K    PDVVTY  +I+G CK G++D+A    N M
Sbjct: 197 YTILIEATCKESGVGQAMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNM 255

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
            S G +P+ +T N+++      G  + AE +   ML  G  P VVTF+ LI+  CR G L
Sbjct: 256 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 315

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + + + ++M     +PN  ++  L++  CKE +++ A  +L  +      P    YN +
Sbjct: 316 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 375

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           +   CK G VD A  I+ ++  K C P  +T+  +I G    G+   AI + ++M R G 
Sbjct: 376 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 435

Query: 539 APDDITVNSLISCLLKGGMPNEAFR 563
            PD IT +SL+S L + G  +EA +
Sbjct: 436 KPDIITYSSLVSGLSREGKVDEAIK 460



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 176/336 (52%), Gaps = 4/336 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
            SL+    +     +A ++ +   +  + PD  T+N+LI G  + GE+  A +    M  
Sbjct: 96  TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN- 154

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
              +PD+VTYNT++  LC   ++ +  E+L   + + E  PDV+TYT +I   CK   + 
Sbjct: 155 --VAPDVVTYNTILRTLCDSGKLKQAMEVLDR-QLQKECYPDVITYTILIEATCKESGVG 211

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  + +EM + G KP  VT+NVLI+G  K G +  A      M S+G  P+V+T + ++
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 271

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
              C  G+     KL  +M  K  SP+V TF ILIN LC++  L  A   L+++  +   
Sbjct: 272 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 331

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YNP++ GFCK   +D A   +  M  + C PD VT+  L+   C  G++  A+ I
Sbjct: 332 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 391

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            N++   GC+P  IT N++I  L K G    A +++
Sbjct: 392 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 204/424 (48%), Gaps = 5/424 (1%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           G KFLE       +       +L+ R  C +G       V + +   G +P+       +
Sbjct: 76  GFKFLESMVYRGDIPDIIPCTSLI-RGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 134

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           S   ++G+ D A  +L +     V      YN++L  L       +A+ +     +    
Sbjct: 135 SGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY 191

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  T+ ILI+   +   V +A +   +M + G  PD+VTYN LI+G+C+   +    + 
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +       P+V+T+  ++   C  G+   A  + ++M   G  PS VTFN+LI+   
Sbjct: 252 LNNMPSYG-CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLC 310

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G +  A  + E+M   G  P+ ++++ L+ G+C+  ++++ ++  D M  +   P++ 
Sbjct: 311 RQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIV 370

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  L+ ALCK+ +++ A   L QL      P    YN VIDG  K G  + A  ++ EM
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 430

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K  KPD +T++ L+ G   +G++ EAI  F+ +  +G  P+ IT NS++  L K    
Sbjct: 431 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 490

Query: 559 NEAF 562
           + A 
Sbjct: 491 DRAI 494



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 157/314 (50%), Gaps = 1/314 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C+ G  D      + M S G  PN       + S    G+   A+ LLS  
Sbjct: 231 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 290

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + S   +N L+N L +Q     A+ + ++       P++ ++N L+ G  +  ++
Sbjct: 291 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 350

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E+   M S GC PDIVTYNTL++ LC+  +V    E+L ++  K   SP ++TY +
Sbjct: 351 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG-CSPVLITYNT 409

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+GK ++A  + +EM   G+KP  +T++ L+ G  + G +  A      +   G
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +T++S++ G C++ Q ++ +     M  K   P   T+TILI  +  E    +A 
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529

Query: 458 RFLKQLKWNDLVPK 471
             L +L    LV K
Sbjct: 530 DLLNELCSRGLVKK 543


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 218/432 (50%), Gaps = 23/432 (5%)

Query: 156 FKTYNLVMRSLC------EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+ + S+C         L D V+ V++ M +   + N      F       GK + 
Sbjct: 376 YVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEK 435

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +L +         T  Y  ++  L +    +++  +F+E  R    PD +T+ ILI 
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILID 495

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A  +F +M S GCSP++VTY  L+    +  ++ + H++   +   +   
Sbjct: 496 SFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM-VDAACY 554

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+ VTY+++I G CK G++ KA  +Y ++                ++C I P+ VT+  L
Sbjct: 555 PNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGAL 614

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           IDG  K   +  A  + + ML+ G  P+ + + +LIDG+C+ G+++   ++   M     
Sbjct: 615 IDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGY 674

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+V+T+T LI+ + K+ RL+ A + L ++  +   P    Y  +IDG  K G +++A  
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALN 734

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +++ MEEK C P+ VT+T LI G    G+   ++ +F +M   GCAP+ +T   LI+   
Sbjct: 735 LLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCC 794

Query: 554 KGGMPNEAFRIM 565
             G+ +EA  ++
Sbjct: 795 AAGLLDEAHLLL 806



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 192/385 (49%), Gaps = 15/385 (3%)

Query: 164 RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           R LC +G  +    +   M   G +P++      ++   +A K + +  L  + +   V 
Sbjct: 425 RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN 484

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
              + Y  L+++  K    ++A   F E   +   P+  T+  L+    +  ++ +A + 
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDI 544

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-----KFKSEF---------- 328
           F+ M    C P+ VTY+ LI GLC+  E+ +  E+ +++       +S+F          
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTI 604

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P+VVTY ++I G CK  K+  A  + + M + G +P+ + ++ LIDGF K+G + +A+ 
Sbjct: 605 APNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQE 664

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  RM   GYLP V T++SLID   ++G+L+  +K+  EM   + +PNV T+T +I+ L 
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLS 724

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K   +  A   L  ++     P    Y  +IDG  K G  D +  +  +M  K C P+ V
Sbjct: 725 KVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYV 784

Query: 509 TFTILIIGHCMKGRMVEAISIFNKM 533
           T+ +LI   C  G + EA  + ++M
Sbjct: 785 TYRVLINHCCAAGLLDEAHLLLDEM 809



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 220/506 (43%), Gaps = 89/506 (17%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+    +   ++F  M+  G  P+       + S  +AG  + A+    + 
Sbjct: 454 TYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM 513

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R    + +   Y +LL+A +K     +A  +F         P+  T++ LI GL + GE+
Sbjct: 514 RSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEI 573

Query: 278 KKAFEF--------------FYDMGSFGCS--PDIVTYNTLISGLCRVNEVARGHELLKE 321
           +KA E               FY  G+  C+  P++VTY  LI GLC+  +V+  HELL +
Sbjct: 574 QKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELL-D 632

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA-------------- 367
               +   P+ + Y ++I G+CK+GK+D A  ++  M  CG  PS               
Sbjct: 633 AMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDG 692

Query: 368 ---------------------VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
                                VT+  +IDG  KVG +  A  +   M   G  P+VVT++
Sbjct: 693 RLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYT 752

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK-- 464
           +LIDG  + G+ +  LKL  +M  K  +PN  T+ +LIN  C    L++A   L ++K  
Sbjct: 753 ALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHT 812

Query: 465 -W------------------------------NDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            W                              ++ VP   +Y  +ID F KAG ++ A  
Sbjct: 813 HWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALE 872

Query: 494 IVAEMEEKRCKPDKVT---FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           +  E+ E     +  +   +  LI   C+  ++ EA +++ +M R G  PD I   SL+ 
Sbjct: 873 LHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVK 932

Query: 551 CLLKGGMPNEAFRI-MQRASEDQNLQ 575
            L++    +EA ++   R  E  N Q
Sbjct: 933 GLIEVNKWDEALQLCYGRCHEGVNWQ 958



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 201/418 (48%), Gaps = 29/418 (6%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + + M ++G  PN  +    V     AG    A  L ++            YN  + ++ 
Sbjct: 328 IINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSIC 387

Query: 238 KQN---NADEAVYMFKEYFRLYS------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
            Q    NA+    + K Y  + +      + +T  F+  + G   +G+ +KAF+   +M 
Sbjct: 388 GQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCG---VGKFEKAFQILKEMM 444

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD  TY  +I+ LC+  +V +   L +E+K ++  +PDV TYT +I  +CK G +
Sbjct: 445 RKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMK-RAGVNPDVYTYTILIDSFCKAGLI 503

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++A   ++EM S G  P+ VT+  L+  + K   ++ A  +  RM+     P+ VT+S+L
Sbjct: 504 EQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSAL 563

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKN----------------LSPNVYTFTILINALCKENR 452
           IDG C+ G++ +  ++ +++ G +                ++PNV T+  LI+ LCK  +
Sbjct: 564 IDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQK 623

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA   L  +      P   +Y+ +IDGFCK G +D A  +   M +    P   T+T 
Sbjct: 624 VSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTS 683

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI      GR+  A+ + ++ML   C P+ +T  ++I  L K G   +A  ++    E
Sbjct: 684 LIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEE 741



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 179/431 (41%), Gaps = 58/431 (13%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +S  + A   + A   L + R      +   Y +LL+  +K+        +         
Sbjct: 278 ISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGC 337

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG------------ 305
            P+   FN L+ G    G+   A++ F  M + G  P  V YN  I              
Sbjct: 338 NPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAEL 397

Query: 306 -----------------------------LCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
                                        LC V +  +  ++LKE+  K  F PD  TYT
Sbjct: 398 LDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKG-FVPDTSTYT 456

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            VI+  C+  K++K+  ++ EM   G+ P   T+ +LID F K G +  A    + M S 
Sbjct: 457 KVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSV 516

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+VVT+++L+  Y ++ QL Q   +   M      PN  T++ LI+ LCK   +  A
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKA 576

Query: 457 RRFLKQL-------------KWND---LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
               ++L             + ND   + P    Y  +IDG CKA  V +A+ ++  M  
Sbjct: 577 CEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLA 636

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
             C+P+++ +  LI G C  G++  A  +F +M + G  P   T  SLI  + K G  + 
Sbjct: 637 AGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696

Query: 561 AFRIMQRASED 571
           A +++     D
Sbjct: 697 AMKVLSEMLND 707



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 200/474 (42%), Gaps = 45/474 (9%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS--- 191
           +P+L ++F  ++   +  +H+   Y+ +   L   G  D  +     +R  G        
Sbjct: 113 SPELCVRFFLWAERQVGYSHTGACYDALAEIL---GFEDPARTAERLLREIGEDDREVLR 169

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
            ++   V  C R G  D A   L + +      S   YN+L+  L      +    + KE
Sbjct: 170 RLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKE 229

Query: 252 --------------YF-RLYSQPDTWT----------FNI-------LIQGLSRIGEVKK 279
                         YF +   +   W           FN+       +I GL       +
Sbjct: 230 MSASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNE 289

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A  F + M    C P++VTY TL+SG  +  +      ++  +      +P+   + S++
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIIN-MMMTEGCNPNPSLFNSLV 348

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR------ERM 393
            GYC  G    A  ++N M +CG  P  V +N+ I        + +AE +       E M
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEM 408

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           L+   + + V  ++     C  G+  +  ++  EM  K   P+  T+T +I  LC+  ++
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             +    +++K   + P  + Y  +ID FCKAG +++A     EM    C P+ VT+T L
Sbjct: 469 EKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTAL 528

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  +    ++++A  IF++M+   C P+ +T ++LI  L K G   +A  + ++
Sbjct: 529 LHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 129/321 (40%), Gaps = 46/321 (14%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY  ++  + + G  D    V   M +D   PN       +    + G+ + A  LL
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLL 736

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S       + +   Y +L++ L K   AD ++ +FK+                       
Sbjct: 737 SLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQ----------------------- 773

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
                       M S GC+P+ VTY  LI+  C    +   H LL E+K  + +   +  
Sbjct: 774 ------------MNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMK-HTHWPKHLQG 820

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y   + G+ K  K   + G+  EM S    P A  + +LID F K G + +A  + + ++
Sbjct: 821 YHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELV 878

Query: 395 SFGYLPDVVT---FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
                 ++ +   ++SLI   C   Q+ +   L  EM  K + P++  F  L+  L + N
Sbjct: 879 EVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVN 938

Query: 452 RLNDAR-----RFLKQLKWND 467
           + ++A      R  + + W D
Sbjct: 939 KWDEALQLCYGRCHEGVNWQD 959



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 5/231 (2%)

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C+ G  D+A      +   G +PSAVT+N L+      G +     +++ M + G+  D 
Sbjct: 180 CRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDR 239

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
            T        C+ G+    L +   ++ ++ + +    T +I+ L + +  N+A  FL +
Sbjct: 240 STIGYFAQALCKVGRWADALNM---LEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHR 296

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           ++ N  +P    Y  ++ GF K         I+  M  + C P+   F  L+ G+C  G 
Sbjct: 297 MRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGD 356

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLL-KGGMPN-EAFRIMQRASED 571
              A  +FN+M   G  P  +  N  I  +  +  +PN E   ++++  E+
Sbjct: 357 YAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEE 407



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 8/251 (3%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           RLD   L +K L    +N S N +  TY  ++  L ++G  +    +   M   G  PN 
Sbjct: 693 RLD---LAMKVLS-EMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +    + GK DA+  L  Q        +   Y  L+N        DEA  +  E
Sbjct: 749 VTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
               +       ++  +QG S+  +   +     +M S    P    Y  LI    +   
Sbjct: 809 MKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGR 866

Query: 312 VARGHELLKE-VKFKSEFS-PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
           +    EL KE V+  S  +      Y S+I   C   ++++A  +Y EM   GI P  + 
Sbjct: 867 LETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIV 926

Query: 370 FNVLIDGFGKV 380
           F  L+ G  +V
Sbjct: 927 FVSLVKGLIEV 937


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 192/378 (50%), Gaps = 37/378 (9%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           +  +N+L+N   KQ    +   + +       QP+  ++N L++GL ++    +A E   
Sbjct: 10  SVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVR 69

Query: 286 DMGSFG--CSPDIVTYNTLISGLCRVNEVARGHELLKEV--------------------- 322
           DM S G   +PD+VTY+TL+SG C+  +V    ELLKEV                     
Sbjct: 70  DMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCK 129

Query: 323 -------------KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
                          ++   P ++T+ ++ISG C+   ++ A  +   M + G+K   VT
Sbjct: 130 SARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVT 189

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N L+DG  K G +  AE + ERM + G  PDVV +SS + G C++G++    ++ ++M+
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMR 249

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM-YNPVIDGFCKAGNV 488
             +  PNV T+  +++ LCK  +++ A   ++Q+  +D      + Y+ V+DG CK G  
Sbjct: 250 DSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  ++  M    C+PD VT++ L+ G C  G++ EA+    +M   GC P+ +T  SL
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369

Query: 549 ISCLLKGGMPNEAFRIMQ 566
           +  L   G   EA R+++
Sbjct: 370 VHGLCSCGRLAEAERMVE 387



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 206/412 (50%), Gaps = 9/412 (2%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN ++  LC++   H++ ++V D +   G   P+       +S   +AGK + ++ LL 
Sbjct: 47  SYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLK 106

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +     MY  ++ +L K     EA+ + +E  R    P   TFN LI G  R  
Sbjct: 107 EVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK 166

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            ++ A      M + G   D+VTYNTL+ GLC+   +    +LL+ +K  S  +PDVV Y
Sbjct: 167 NLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK-ASGCAPDVVAY 225

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +S + G CK GK+  A  +  +M      P+ VT+N ++DG  K G + +A  M E+M S
Sbjct: 226 SSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285

Query: 396 F-GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   +VV +S+++DG C+ G+  +   + + M      P+V T++ L+N LCK  ++ 
Sbjct: 286 SDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIE 345

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-----KRCKPDKVT 509
           +A   ++++      P    Y  ++ G C  G + EA  +V EM         C P   T
Sbjct: 346 EAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVST 405

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +  LI G C  GR+ +A+  F +M   GC PD ++ ++++  L + G   +A
Sbjct: 406 YNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 208/418 (49%), Gaps = 9/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++    + G     + + + M + G  PN       +    +  +   A+ L+   
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 218 --RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             R G  T     Y++LL+   K    +E+  + KE      +PD   +  ++  L +  
Sbjct: 72  ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSA 131

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + +A E   +M   GC P ++T+NTLISG CR   +     LL+ +   S    DVVTY
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA-ASGVKADVVTY 190

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ G CK G++ +A  +   M + G  P  V ++  + G  K G +++A  + E+M  
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRD 250

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLN 454
             + P+VVT+++++DG C++G+++  L++ ++M   +    NV  ++ +++ LCK  R  
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +AR  ++ +      P    Y+ +++G CKAG ++EA   V EM  + CKP+ VT+  L+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370

Query: 515 IGHCMKGRMVEAISIFNKMLRIG-----CAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            G C  GR+ EA  +  +M   G     C P   T N+LI  L K G  ++A +  QR
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 180/345 (52%), Gaps = 37/345 (10%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P++ TFN L+ G S+ G           M + G  P++V+YN L+ GLC++       EL
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 319 LKE-VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA---------- 367
           +++ +      +PD+VTY++++SGYCK GK++++  +  E+ S G++P A          
Sbjct: 68  VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127

Query: 368 -------------------------VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
                                    +TFN LI G  +  N+  A+ + + M + G   DV
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VT+++L+DG C+ G+L +  +L + MK    +P+V  ++  +  LCK  ++ +A + L+Q
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTILIIGHCMKG 521
           ++ +D  P    YN ++DG CK+G +D A  ++ +M     C  + V ++ ++ G C  G
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           R  EA S+   M R GC PD +T +SL++ L K G   EA   ++
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 148/288 (51%), Gaps = 4/288 (1%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   GC P+ VT+N L++G  +         LL+ +  +    P+VV+Y  ++ G CKL 
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARG-IQPNVVSYNGLLEGLCKLE 59

Query: 347 KMDKATGIYNEMNSCGIK--PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +  +A  +  +M S G +  P  VT++ L+ G+ K G +  +  + + ++S G  PD + 
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++ ++   C++ +L + L+L +EM      P + TF  LI+  C+E  L  A   L+ + 
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA 179

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            + +      YN ++DG CKAG + EA  ++  M+   C PD V ++  + G C  G+++
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM-QRASED 571
            A  +  +M      P+ +T N+++  L K G  + A  +M Q AS D
Sbjct: 240 NAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 216/444 (48%), Gaps = 4/444 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L  ++   +P+  L+ L  +        S   Y  +++ L   G  D ++ +   MR +G
Sbjct: 60  LAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREG 119

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGL-LSQFRPGE--VTMSTFMYNSLLNALVKQNNAD 243
           H   + ++  FV S  R  + D A  L L+Q       V   T ++N LLN LV+ +   
Sbjct: 120 HQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLK 179

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
               ++ E      QPD  T N LI+ L R  +V+ A     +M S G +PD  T+ TL+
Sbjct: 180 LLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLM 239

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            G      +     + K    ++  SP  VT   +I+GYCK+G+++ A G   +  + G 
Sbjct: 240 QGFIEEGSIEAALRV-KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGF 298

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P  VT+N  + G  + G++  A  + + ML  G+ PDV T++++I+   +NG+L++   
Sbjct: 299 EPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 358

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           + ++M  +   P+  TF  LI AL  +NRL +A    ++L    L P  + +N +I+  C
Sbjct: 359 IVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 418

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G+      +  EM+   C PD+VT+ ILI   C  G++  A+ + N+M   GC    +
Sbjct: 419 KVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTV 478

Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
           T N++I  L K     EA  +  +
Sbjct: 479 TYNTIIDALCKKMRIEEAEEVFDQ 502



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 198/418 (47%), Gaps = 11/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T+  +M+   E G  ++   V   M   G  P    +   ++   + G+ + A G + Q 
Sbjct: 234 TFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P +VT     YN+ ++ L +  +   A+ +     +    PD +T+N +I  LS
Sbjct: 294 IADGFEPDQVT-----YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLS 348

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + GE+ +A      M   GC PD  T+NTLI  L   N +    +L +E+  K   SPDV
Sbjct: 349 KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG-LSPDV 407

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +I+  CK+G       ++ EM S G  P  VT+N+LID    +G + +A  +   
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE 467

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G     VT++++ID  C+  ++ +  ++ D+M  + +S +  TF  LI+ LCK  R
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA   ++Q+    L P    YN ++  +CK GN+ +A  I+  M     + D VT+  
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G C  GR   A+ +   M   G  P     N +I  L +     +A  + +  +E
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTE 645



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 208/438 (47%), Gaps = 13/438 (2%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           V+ +LDN   G++                 +N ++  L E      ++ V++ M   G  
Sbjct: 147 VLNQLDNDTFGVQ------------ADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQ 194

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+   +   + +  RA +   A  +L +     V      + +L+   +++ + + A+ +
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
             +       P   T N+LI G  ++G V+ A  +     + G  PD VTYNT + GLC+
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              V+   +++ ++  +    PDV TY +VI+   K G++D+A GI N+M   G  P   
Sbjct: 315 NGHVSHALKVM-DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 373

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           TFN LI        +  A  +   +   G  PDV TF+ LI+  C+ G  + G++L +EM
Sbjct: 374 TFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 433

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           K    +P+  T+ ILI+ LC   +L +A   L +++ N        YN +ID  CK   +
Sbjct: 434 KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRI 493

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           +EA  +  +M+ +      VTF  LI G C   R+ +A  +  +M++ G  P++IT NS+
Sbjct: 494 EEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSI 553

Query: 549 ISCLLKGGMPNEAFRIMQ 566
           ++   K G   +A  I++
Sbjct: 554 LTHYCKQGNIKKAADILE 571



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 198/409 (48%), Gaps = 8/409 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMR---SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           T N+++   C+MG    V+    Y++   +DG  P+      FV    + G    A  ++
Sbjct: 269 TVNVLINGYCKMG---RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM 325

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                       F YN+++N L K    DEA  +  +       PDT TFN LI  LS  
Sbjct: 326 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQ 385

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +++A +   ++   G SPD+ T+N LI+ LC+V +   G  L +E+K  S  +PD VT
Sbjct: 386 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK-SSGCTPDEVT 444

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I   C +GK+  A  + NEM S G   S VT+N +ID   K   +  AE + ++M 
Sbjct: 445 YNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMD 504

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           + G     VTF++LIDG C+  +++   +L ++M  + L PN  T+  ++   CK+  + 
Sbjct: 505 AQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIK 564

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L+ +  N        Y  +I+G CKAG    A  ++  M  K  +P    +  +I
Sbjct: 565 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI 624

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP-NEAF 562
                +  + +A+++F +M  +G  PD +T   +   L +GG P  EAF
Sbjct: 625 QSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAF 673



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 110/279 (39%), Gaps = 38/279 (13%)

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           I   + L++ L   ++      +L     + +F+P    Y  ++      G  D   G+ 
Sbjct: 53  ISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLV 112

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML---SFGYLPDVVTFSSLIDGY 412
            EM   G +  AV     ++ + ++     A  +    L   +FG   D V F+ L++  
Sbjct: 113 REMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVL 172

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
               +L     + +EM G+ + P+V T   LI AL                         
Sbjct: 173 VEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKAL------------------------- 207

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
                     C+A  V  A +++ EM      PD+ TFT L+ G   +G +  A+ +  K
Sbjct: 208 ----------CRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAK 257

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           M+  GC+P  +TVN LI+   K G   +A   +Q+   D
Sbjct: 258 MMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD 296



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 96/246 (39%), Gaps = 16/246 (6%)

Query: 105 RSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMR 164
           RS+   +T    LC+K+    + EV  ++D                 ++ S  T+N ++ 
Sbjct: 475 RSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ--------------GISRSAVTFNTLID 520

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
            LC+    D    + + M  +G  PN+      ++   + G    A  +L         +
Sbjct: 521 GLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEI 580

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
               Y +L+N L K      A+ + +       +P    +N +IQ L R   ++ A   F
Sbjct: 581 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLF 640

Query: 285 YDMGSFGCSPDIVTYNTLISGLCR-VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
            +M   G  PD +TY  +   LCR    +    + L E+  K  F P+  ++  +  G  
Sbjct: 641 REMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKG-FMPEFSSFRMLAEGLL 699

Query: 344 KLGKMD 349
            LG  D
Sbjct: 700 NLGMDD 705


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 201/407 (49%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++ +C+ G  +    + + M   G  P++      +   ++       K LLS+ 
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  + +    ++N L +  + ++A  +F+    L  +P+   +  LI+G  + G  
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   G  PD++ YN++I GLC+  ++    + L E+  +    P+V TY +
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM-IERGLKPNVYTYGA 556

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK G+M  A   + EM  CGI P+ V    LIDG+ K G+   A  +   ML   
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV T+S+LI G  RNG+L   ++L  E   K L P+V+T+  +I+  CK+  +  A 
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  + +    + P    YN +I+G CKAG ++ A  +   +  K    + VT+  +I G+
Sbjct: 677 QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C  G + +A  +F++M   G  PD    ++LI    K G   +A  +
Sbjct: 737 CKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSL 783



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 208/419 (49%), Gaps = 3/419 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G        F  M   G  PN  +    +    + G    A  +    
Sbjct: 553 TYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM 612

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      Y++L++ L++      A+ +  E+      PD +T+N +I G  + G +
Sbjct: 613 LGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGI 672

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF+    M   G SP+I+TYN LI+GLC+  E+ R  EL   +  K   + + VTY +
Sbjct: 673 GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG-LAHNAVTYAT 731

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK G + KA  +++EM   G+ P +  ++ LIDG  K GN   A  +    +  G
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +     + ++L+DG+C++G++ +  +L ++M  K++ P+  T+TILI+  CK   L +A 
Sbjct: 792 F-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAE 850

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +F   ++  +L+P    Y  ++ G+  AG   E   +  EM  K  +PD VT++++I  H
Sbjct: 851 QFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAH 910

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
             +G  V+ + + + ML+ G        + LI  L +    +E  +++++  E+Q L L
Sbjct: 911 LKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKI-EEQGLNL 968



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 218/476 (45%), Gaps = 38/476 (7%)

Query: 120 KLSPLNSLEVI-KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH---DSV 175
           KLSP     VI K++++PK  L F  + +  +  +   ++++++   LC   L    DSV
Sbjct: 64  KLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSV 123

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSC------------------------------IRAG 205
                 M S G+   S +++  + SC                               + G
Sbjct: 124 VNQMIMMSSGGY---SEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKG 180

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             D A       +     +     N LL+ L+K N  +     +          D +T+ 
Sbjct: 181 LFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYT 240

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI    R G  K+     ++M   GCSP +VTYN +I GLCR  EV    E LK++  K
Sbjct: 241 HLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFE-LKKLMDK 299

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
                DV TY+ +I G+ K  +  +A  +  EM S G+KP  V +  LIDGF + G+   
Sbjct: 300 KGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGE 359

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  ++E ML+ G   ++ T+++L+ G C+ G + +   L +EM    + P+  T+  +I 
Sbjct: 360 AFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIE 419

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              KE   +  +  L ++K ++LVP  +    +I+G C+ G++++A+ +   M     KP
Sbjct: 420 GYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKP 479

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           + V +T LI GH  +GR  EA+ I   M + G  PD +  NS+I  L K     EA
Sbjct: 480 NAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 204/453 (45%), Gaps = 11/453 (2%)

Query: 113 CARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH 172
           C   L   L   N LE+  R  N  L    L          H   TY  ++ +    G  
Sbjct: 203 CCNGLLSDLLKANKLELFWRFYNGMLEANVL----------HDVYTYTHLINAHFRAGNA 252

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
              + +   M   G  P+       +    RAG+ D A  L        +    F Y+ L
Sbjct: 253 KEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSIL 312

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++   KQ    EA  M +E F    +P    +  LI G  R G+  +AF    +M + G 
Sbjct: 313 IDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGV 372

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
             ++ TYN L+ G+C+  ++ +   LL E+       PD  TY ++I GY K     +  
Sbjct: 373 KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG-IKPDTQTYNNMIEGYLKEQNTSRVK 431

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            + +EM    + P+A T  ++I+G  + G++  A  + E M+S G  P+ V +++LI G+
Sbjct: 432 DLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGH 491

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            + G+  + +++   M  K + P+V  +  +I  LCK  ++ +A+ +L ++    L P  
Sbjct: 492 VQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV 551

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           + Y  +I G+CK+G +  A+    EM      P+ V  T LI G+C +G   EA SIF  
Sbjct: 552 YTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           ML     PD  T ++LI  LL+ G    A  ++
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 194/444 (43%), Gaps = 36/444 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            + L++    + GL D     F   + +G +         +S  ++A K +      +  
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    + Y  L+NA  +  NA E   +  E       P   T+N++I GL R GEV
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV 287

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AFE    M   G   D+ TY+ LI G  +         +L+E+ F     P  V YT+
Sbjct: 288 DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM-FSKGLKPGHVAYTA 346

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ + G   +A  +  EM + G+K +  T+N L+ G  K G+M  A+ +   M+  G
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK-------- 449
             PD  T++++I+GY +    ++   L  EMK  NL P  YT  ++IN LC+        
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 450 ---------------------------ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                                      E R  +A R LK +    + P    YN VI G 
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK+  ++EA   + EM E+  KP+  T+  LI G+C  G M  A   F +ML  G AP+D
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
           +   +LI    K G   EA  I +
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFR 610



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 171/359 (47%), Gaps = 6/359 (1%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYN ++   C+ G       + +YM   G  PN       ++   +AG+ + A+ L    
Sbjct: 658  TYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI 717

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +  +   Y ++++   K  N  +A  +F E       PD++ ++ LI G  + G  
Sbjct: 718  PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNT 777

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +KA   F +    G +    + N L+ G C+  +V   ++LL+++  K    PD VTYT 
Sbjct: 778  EKALSLFLESVQKGFAS-TSSLNALMDGFCKSGKVIEANQLLEDMVDK-HVKPDHVTYTI 835

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I  +CK G + +A   + +M    + P+A+T+  L+ G+   G       + + M++  
Sbjct: 836  LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALCKENRLND 455
              PD VT+S +ID + + G   + LKL D+M  KG N+S NV    +LI+ LC++  +++
Sbjct: 896  IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVC--HVLIDPLCRKEHVSE 953

Query: 456  ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              + L++++   L       + ++  F KAG +D A  ++  M   +  PD      LI
Sbjct: 954  VLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 156/323 (48%), Gaps = 2/323 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYN ++  LC+ G  +  + +FD +   G   N+      +    ++G    A  L  + 
Sbjct: 693  TYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM 752

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                V   +F+Y++L++   K+ N ++A+ +F E  +      T + N L+ G  + G+V
Sbjct: 753  TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ-KGFASTSSLNALMDGFCKSGKV 811

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             +A +   DM      PD VTY  LI   C+   +    +   +++ K    P+ +TYT+
Sbjct: 812  IEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQ-KRNLMPNALTYTA 870

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            ++SGY   G+  +   +++EM +  I+P  VT++V+ID   K G+ V    + + ML  G
Sbjct: 871  LLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKG 930

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
                      LID  CR   +++ LK+ ++++ + L+ ++ T + L+    K  +++ A 
Sbjct: 931  GNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAA 990

Query: 458  RFLKQLKWNDLVPKPFMYNPVID 480
            R LK +     VP     N +I+
Sbjct: 991  RVLKSMVRFKWVPDSTELNDLIN 1013



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 34/320 (10%)

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K +E    + S   SPD+V  +++I+   +VN+  R  +    V+F+  FS  + +++ 
Sbjct: 51  QKNWESLLPLVSNKLSPDVV--HSVITK--QVNDPKRLLDFFNWVQFQMGFSQKLQSFSI 106

Query: 338 VISGYCKLGKMDKATGIYNEM----------------NSC--------------GIKPSA 367
           +    C      +A  + N+M                 SC                    
Sbjct: 107 LALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRG 166

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V F +LIDG+ K G    A          G++  ++  + L+    +  +L    +  + 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M   N+  +VYT+T LINA  +     + +R L +++     P    YN VI G C+AG 
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           VDEA  +   M++K    D  T++ILI G   + R  EA  +  +M   G  P  +   +
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 548 LISCLLKGGMPNEAFRIMQR 567
           LI   ++ G   EAFR+ + 
Sbjct: 347 LIDGFMRQGDSGEAFRVKEE 366


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 217/447 (48%), Gaps = 16/447 (3%)

Query: 125 NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
           ++++ I+R  + +L L              S K YN  +RSL    + + +  V+  +  
Sbjct: 16  DAIQAIRRTGSARLAL--------------SPKCYNFALRSLARFDMTEYMGRVYSQLVQ 61

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           DG LP++      + S  + G    A         G +   TF  N+L+    +     +
Sbjct: 62  DGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRK 121

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A ++F     +  Q + +++ ILIQGL     V+KA   F  M   GCSP++  +  LIS
Sbjct: 122 ACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLIS 181

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+   V     LL +   ++   P V+TY ++I GY KLG+M+ A  I   M   G  
Sbjct: 182 GLCKSGRVGDAR-LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCH 240

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P   T+N LI G         AE +    +  G+ P VVTF++LI+GYC   + +  L++
Sbjct: 241 PDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 299

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            ++M       ++  F  LIN+L K++RL +A+  L ++  N LVP    Y  +IDG+CK
Sbjct: 300 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 359

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           +G VD A  ++  ME   C+P+  T+  L+ G     ++ +A+++  KM + G  P+ IT
Sbjct: 360 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 419

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASED 571
             +L+         + AFR+ +   ++
Sbjct: 420 YTTLLQGQCDEHDFDNAFRLFEMMEQN 446



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 201/410 (49%), Gaps = 5/410 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    ++ +++ + ++ +G  P        ++    A K D A  + ++ 
Sbjct: 245 TYNTLIYGLCDQKTEEAEELLNNAVK-EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 303

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +  +   ++  L+N+L+K++   EA  +  E       P+  T+  +I G  + G+V
Sbjct: 304 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 363

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    M   GC P+  TYN+L+ GL +  ++ +   LL +++ K    P+V+TYT+
Sbjct: 364 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ-KDGIIPNVITYTT 422

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C     D A  ++  M   G+KP    + VL D   K G    AE     ++  G
Sbjct: 423 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR---AEEAYSFIVRKG 479

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
                V +++LIDG+ + G  +    L + M  +  +P+ YT+++L++ALCK+ RLN+A 
Sbjct: 480 VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEAL 539

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L Q+    +    F Y  +ID   + G  D A  +  EM     KP   T+T+ I  +
Sbjct: 540 PILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSY 599

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +GR+ +A  +  KM R G APD +T N LI      G  + AF  ++R
Sbjct: 600 CKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 649



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 180/362 (49%), Gaps = 4/362 (1%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            ++S I+  +   AK LL++     +  +   Y S+++   K    D A+ + K   R  
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            QP+ WT+N L+ GL +  ++ KA      M   G  P+++TY TL+ G C  ++     
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            L  E+  ++   PD   Y  +    CK G+ ++A   Y+ +   G+  + V +  LIDG
Sbjct: 438 RLF-EMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDG 493

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K GN   A  + ERM+  G  PD  T+S L+   C+  +LN+ L + D+M  + +   
Sbjct: 494 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           ++ +TILI+ + +E + + A+R   ++  +   P    Y   I+ +CK G +++A  ++ 
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +ME +   PD VT+ ILI G    G +  A S   +M+   C P+  T   L+  LLKG 
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 673

Query: 557 MP 558
           + 
Sbjct: 674 LA 675



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 195/444 (43%), Gaps = 69/444 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y ++++ LC+        V+F  M+ DG  PN     F +S   ++G+   A+      
Sbjct: 140 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR------ 193

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                         LL   + QN                  P   T+N +I G S++G +
Sbjct: 194 --------------LLFDAMPQNGV---------------VPSVMTYNAMIVGYSKLGRM 224

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   GC PD  TYNTLI GLC   +     ELL     K  F+P VVT+T+
Sbjct: 225 NDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNA-VKEGFTPTVVTFTN 282

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC   K D A  + N+M S   K     F  LI+   K   +  A+ +   + + G
Sbjct: 283 LINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG 342

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+V+T++S+IDGYC++G+++  L++   M+     PN +T+  L+  L K+ +L+ A 
Sbjct: 343 LVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAM 402

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L +++ + ++P    Y  ++ G C   + D A  +   ME+   KPD+  + +L    
Sbjct: 403 ALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDAL 462

Query: 518 CMKGRMVEAIS--------------------------------IFNKMLRIGCAPDDITV 545
           C  GR  EA S                                +  +M+  GC PD  T 
Sbjct: 463 CKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 522

Query: 546 NSLISCLLKGGMPNEAFRIMQRAS 569
           + L+  L K    NEA  I+ + S
Sbjct: 523 SVLLHALCKQKRLNEALPILDQMS 546



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 20/424 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++  C+    D+   +F+ M  +G  P+         +  +AG+ + A   +   
Sbjct: 419 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--V 476

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G V ++   Y +L++   K  N D A  + +        PD++T+++L+  L +   +
Sbjct: 477 RKG-VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 535

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G    I  Y  LI  + R  +      +  E+   S   P   TYT 
Sbjct: 536 NEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT-SSGHKPSATTYTV 594

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I+ YCK G+++ A  +  +M   G+ P  VT+N+LIDG G +G +  A    +RM+   
Sbjct: 595 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGAS 654

Query: 398 YLPDVVTFSSLID-------GYCRNG---------QLNQGLKLCDEMKGKNLSPNVYTFT 441
             P+  T+  L+         Y R+          +L+   +L + M    L+P V T++
Sbjct: 655 CEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYS 714

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI   CK  RL +A   L  +    L P   +Y  +I   C     ++A   V+ M E 
Sbjct: 715 SLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSEC 774

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             +P   ++ +L++G C +G   +  S+F  +L +G   D++    L   LLK G  +  
Sbjct: 775 GFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDIC 834

Query: 562 FRIM 565
           F+++
Sbjct: 835 FQML 838



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 174/401 (43%), Gaps = 22/401 (5%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + + + ++G +PN       +    ++GK D A  +L          + + YNSL+  LV
Sbjct: 334 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 393

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K     +A+ +  +  +    P+  T+  L+QG     +   AF  F  M   G  PD  
Sbjct: 394 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 453

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            Y  L   LC+       +  +     +   +   V YT++I G+ K G  D A  +   
Sbjct: 454 AYAVLTDALCKAGRAEEAYSFI----VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIER 509

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P + T++VL+    K   +  A  + ++M   G    +  ++ LID   R G+
Sbjct: 510 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 569

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   ++ +EM      P+  T+T+ IN+ CKE RL DA   + +++   + P    YN 
Sbjct: 570 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 629

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG-----RMVEAISIFN- 531
           +IDG    G +D A   +  M    C+P+  T+  L++ H +KG     R V+   ++N 
Sbjct: 630 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYC-LLLKHLLKGNLAYVRSVDTSGMWNL 688

Query: 532 -----------KMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                      +M++ G  P   T +SLI+   K G   EA
Sbjct: 689 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 729



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 132/305 (43%), Gaps = 17/305 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++  +   G HD  + +++ M S GH P++     F++S  + G+ + A+ L+ +  
Sbjct: 557 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 616

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ--------- 269
              V      YN L++        D A    K       +P+ WT+ +L++         
Sbjct: 617 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 676

Query: 270 -------GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
                  G+  + E+   ++    M   G +P + TY++LI+G C+   +     LL  +
Sbjct: 677 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 736

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K   SP+   YT +I   C     +KA    + M+ CG +P   ++ +L+ G    G+
Sbjct: 737 CGKG-LSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 795

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
               + +   +L  GY  D V +  L DG  + G ++   ++   M+ +    +  T+ +
Sbjct: 796 FEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYAL 855

Query: 443 LINAL 447
           + N +
Sbjct: 856 VTNKM 860


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 215/416 (51%), Gaps = 46/416 (11%)

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           DG   + P +    S+ +R      +  L S+ +   + +ST   + LL+AL     +  
Sbjct: 418 DGAPSSLPNLLLTASAAVRPHA--TSLRLYSRMKSLSLPISTASLHPLLSAL----PSAP 471

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  +F + FRL     T TFNI+++ L   G+  +A E    M      P+ VTYNT+I+
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 527

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-I 363
           G C    V    ++++E++ +   +P+  TY +VISG+CK+G++D+A  +++EM + G +
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP AV +N LI G+   G + +A   R+RM+  G    V T++ L+     +G+  +  +
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRL--------NDARRFLK-------------- 461
           L +EM GK L+P+V+T+ ILIN  CKE  +        N +RR ++              
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 462 ---QLKWND----------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              Q++  D          + P   +YN +I+    +GN+D A  I+ EME+KR  PD V
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T+  L+ G C+ GR+ EA  + ++M   G  PD +T N+LIS     G   +A RI
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRI 823



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 204/413 (49%), Gaps = 9/413 (2%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F +  R+ L L  +  T+N+++R LC  G       +   M      PN+      ++  
Sbjct: 476 FADMFRLRLPLCTT--TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGF 529

Query: 202 IRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQP 259
              G+  AA  ++ + R  G +  + + Y ++++   K    DEAV +F E   +   +P
Sbjct: 530 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 589

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +   +N LI G    G++  A  +   M   G +  + TYN L+  L         +EL+
Sbjct: 590 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 649

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  K   +PDV TY  +I+G+CK G + KA  I+  M+  G++ + VT+  LI    K
Sbjct: 650 EEMGGKG-LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 708

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + + +  +  G  PD+V +++LI+ +  +G +++  ++  EM+ K ++P+  T
Sbjct: 709 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L+  LC   R+++AR+ + ++    + P    YN +I G+   G+V +A  I  EM 
Sbjct: 769 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 828

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            K   P  +T+  LI G C  G+  +A ++  +M+  G  PDD T  SLI  L
Sbjct: 829 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 210/422 (49%), Gaps = 14/422 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   ++ ++ ++ +M   D V  + + M++ G   N       ++   R  +   A  +L
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            +     + P  VT+S     SLLN         EAV +  + F    QP+T TFN LI 
Sbjct: 140 GKMMKLGYEPNIVTLS-----SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL    +  +A      M + GC PD+VTY  +++GLC+  +      LL +++ + +  
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME-QGKLE 253

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V+ Y ++I G CK   MD A  ++ EM + GI+P+ VT++ LI      G    A  +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+     PDV TFS+LID + + G+L +  KL DEM  +++ P++ T++ LIN  C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +RL++A++  + +      P    YN +I GFCK   V+E   +  EM ++    + VT
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
           + ILI G    G    A  IF +M+  G  P+ +T N+L+  L K G   +A   F  +Q
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493

Query: 567 RA 568
           R+
Sbjct: 494 RS 495



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 198/408 (48%), Gaps = 1/408 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL + H+  TY++++   C          V   M   G+ PN   +   ++    + +  
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q        +T  +N+L++ L   N A EA+ +         QPD  T+ +++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G+   AF     M      P ++ YNT+I GLC+   +     L KE++ K   
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG-I 287

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+VVTY+S+IS  C  G+   A+ + ++M    I P   TF+ LID F K G +V AE 
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M+     P +VT+SSLI+G+C + +L++  ++ + M  K+  P+V T+  LI   C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+ +     +++    LV     YN +I G  +AG+ D A  I  EM      P+ +
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           T+  L+ G C  G++ +A+ +F  + R    P   T N +I  + K G
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 204/405 (50%), Gaps = 9/405 (2%)

Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           L E+ L D+V +  + ++S    P   +IEF   +S+  +  K D    L  Q +   + 
Sbjct: 57  LSELKLDDAVALFGEMVKSR---PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
            + + Y+ L+N   +++    A+ +  +  +L  +P+  T + L+ G      + +A   
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G  P+ VT+NTLI GL   N+ +    L+  +  K    PD+VTY  V++G C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLC 232

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G  D A  + N+M    ++P  + +N +IDG  K  +M  A  + + M + G  P+VV
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+SSLI   C  G+ +   +L  +M  + ++P+V+TF+ LI+A  KE +L +A +   ++
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    Y+ +I+GFC    +DEA  +   M  K C PD VT+  LI G C   R+
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIM 565
            E + +F +M + G   + +T N LI  L + G   M  E F+ M
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 215/440 (48%), Gaps = 37/440 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  L           + D M + G  P+       V+   + G  D A  LL++ 
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------YFRLYS-------- 257
             G++     +YN++++ L K  + D+A+ +FKE            Y  L S        
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 258 ---------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                           PD +TF+ LI    + G++ +A + + +M      P IVTY++L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+G C  + +    ++ + +  K  F PDVVTY ++I G+CK  ++++   ++ EM+  G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  + VT+N+LI G  + G+   A+ + + M+S G  P+++T+++L+DG C+NG+L + +
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + + ++   + P +YT+ I+I  +CK  ++ D       L    + P    YN +I GF
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+ G+ +EA+ +  EM+E    P+   +  LI      G    +  +  +M   G A D 
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 606

Query: 543 ITVNSLISCLLKGGMPNEAF 562
            T+  L++ +L  G  +++F
Sbjct: 607 STI-GLVTNMLHDGRLDKSF 625



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 102/220 (46%)

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+D A  ++ EM      PS + F+ L+    K+        + E+M + G   +  T+S
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LI+ +CR  QL   L +  +M      PN+ T + L+N  C   R+++A   + Q+   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    +N +I G        EA  ++  M  K C+PD VT+ +++ G C +G    A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            ++ NKM +    P  +  N++I  L K    ++A  + +
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 91/174 (52%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P ++ FS L+    +  + +  + L ++M+   +  N YT++ILIN  C+ ++L  A  
Sbjct: 78  FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L ++      P     + +++G+C +  + EA  +V +M     +P+ VTF  LI G  
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +  +  EA+++ ++M+  GC PD +T   +++ L K G  + AF ++ +  + +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 82/158 (51%), Gaps = 4/158 (2%)

Query: 414 RNG----QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           RNG    +L+  + L  EM      P++  F+ L++A+ K N+ +      +Q++   + 
Sbjct: 54  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
              + Y+ +I+ FC+   +  A  ++ +M +   +P+ VT + L+ G+C   R+ EA+++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ++M   G  P+ +T N+LI  L      +EA  ++ R
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 213/435 (48%), Gaps = 11/435 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN V+   C+    +S + V D M+  G  P+       + +    GK D A  +  + 
Sbjct: 46  AYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEEL 105

Query: 218 RPGEVTMSTFM-YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   T + Y  L+ A + +   DEA+ +  E      +PDT+T+N++ +GL + G+
Sbjct: 106 LKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGK 165

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +AFEF   + S GC PD++TYN L+  L    +   G + + E+ F     P+VVTY+
Sbjct: 166 VDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEI-FSRGCEPNVVTYS 224

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +IS  C+ GK++++  +   M   G+ P A  ++ LI  F + G +  A    + M+  
Sbjct: 225 ILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICD 284

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+LPD+V +++++   C+NG  +  +++  ++      PNV ++  +++AL        A
Sbjct: 285 GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA 344

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              + Q+    + P    YN +I   C+ G VDEA  ++A+M   R +P+ V++  +++G
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLG 404

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR------IMQRASE 570
            C   R+ +AI +   M+  GC P++ T   LI  +   G   +A        IM   SE
Sbjct: 405 LCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISE 464

Query: 571 DQNLQLPSWKKAVPL 585
           D   +L    K  PL
Sbjct: 465 DSFKRL---NKTFPL 476



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 167/341 (48%), Gaps = 2/341 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            F YN++++   K N  + A  +     R    PD  T NI+I      G++  A + F 
Sbjct: 44  VFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFE 103

Query: 286 DM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
           ++     C P ++TY  LI        +    +LL E+       PD  TY  +  G CK
Sbjct: 104 ELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEM-LSRGLEPDTFTYNVITRGLCK 162

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK+D+A      +NS G KP  +T+N+L+      G     E     + S G  P+VVT
Sbjct: 163 EGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVT 222

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +S LI   CR+G++ + + L   MK K L+P+ Y +  LI A C+E +L+ A  FL  + 
Sbjct: 223 YSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            +  +P    YN ++   CK GN D A  I  +++E  C P+  ++  ++      G   
Sbjct: 283 CDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRY 342

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            A+ + ++ML  G  PD IT NSLISCL + GM +EA  ++
Sbjct: 343 RALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLL 383



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 130/245 (53%), Gaps = 2/245 (0%)

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           ++ PDV+  T +I G+     +DKAT +   +   G KP    +N +I GF K   + SA
Sbjct: 5   DYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESA 63

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE-MKGKNLSPNVYTFTILIN 445
           + + +RM   G+ PDVVT + +I  +C  G+++  LK+ +E +K  N  P + T+TILI 
Sbjct: 64  KTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIE 123

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           A   E  +++A + L ++    L P  F YN +  G CK G VD A   V  +  + CKP
Sbjct: 124 AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKP 183

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D +T+ IL+     +G+  E     +++   GC P+ +T + LIS L + G   E+  ++
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV 243

Query: 566 QRASE 570
           +   E
Sbjct: 244 KVMKE 248



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 2/175 (1%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M++  Y PDV+  + LI G+  +  +++  ++   ++ K+  P+V+ +  +I+  CK NR
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILE-KHGKPDVFAYNAVISGFCKANR 59

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE-MEEKRCKPDKVTFT 511
           +  A+  L ++K     P    +N +I  FC  G +D A  +  E +++  CKP  +T+T
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           ILI  + ++G + EA+ + ++ML  G  PD  T N +   L K G  + AF  ++
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVR 174



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           D  P   +   +I GF  + N+D+A  ++  +E K  KPD   +  +I G C   R+  A
Sbjct: 5   DYQPDVILCTKLIKGFFNSRNIDKATRVMGILE-KHGKPDVFAYNAVISGFCKANRIESA 63

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
            ++ ++M R G +PD +T N +I      G  + A ++ +   +D N
Sbjct: 64  KTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNN 110


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 223/453 (49%), Gaps = 19/453 (4%)

Query: 146 SRVNLSLN--HSFKTYNL---------VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           S+V+L+LN  H  K  N+         ++++L      D    + + M+S G   N+ ++
Sbjct: 198 SKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASIL 257

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
             F+ S    G   +   +L + +   +      Y  +++AL K +    A  +  +   
Sbjct: 258 SLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIH 317

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
                D+ + + +I G  + G   KA      +  F   P+I  Y++ ++ LC+   +  
Sbjct: 318 CGISVDSVSVSSVIDGYCKKGRSDKAINL---LNFFNVRPNIFVYSSFMTKLCKDGNMLE 374

Query: 315 GHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
             +  +E+   SEF   PD   YT +I GYCK+G ++KA     EM   GI PS  T+ +
Sbjct: 375 ASKTFQEM---SEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTL 431

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LI+   K G+M  AEY+ +RM+  G +PDVVTF+ LIDG+ + G L +  +L D M+   
Sbjct: 432 LINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAG 491

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +SP+  T+  LI++L      N+A+  L +L    L P    +  VIDGF K GN +EA 
Sbjct: 492 MSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAF 551

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           ++ + M E+  KPD VT + L+ G+C   RM EA ++F KML  G  PD +  N+LI   
Sbjct: 552 LVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGF 611

Query: 553 LKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
              G  N A  ++    +D  L   +  +A  L
Sbjct: 612 CSAGNMNAACNLVAMMIDDGFLPNITTHRAFAL 644



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 164/316 (51%), Gaps = 8/316 (2%)

Query: 203 RAGKCDAAKGLLSQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           + G+ D A  LL+ F  RP     + F+Y+S +  L K  N  EA   F+E       PD
Sbjct: 336 KKGRSDKAINLLNFFNVRP-----NIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPD 390

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            + + I+I G  ++G++ KAF++  +M  FG +P + TY  LI+  C+  ++A    LL+
Sbjct: 391 CFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQ 450

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  +    PDVVT+  +I G+ K G + KA  + + M S G+ P  VT+N LI      
Sbjct: 451 RMMLEG-LIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIAR 509

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G    A+ +   ++  G  PDV+TF+ +IDG+ + G   +   +   M  +++ P+V T 
Sbjct: 510 GYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTC 569

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           + L+N  C+  R+++A     ++    L P   +YN +I GFC AGN++ A  +VA M +
Sbjct: 570 SALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMID 629

Query: 501 KRCKPDKVTFTILIIG 516
               P+  T     +G
Sbjct: 630 DGFLPNITTHRAFALG 645



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 124/293 (42%), Gaps = 38/293 (12%)

Query: 313 ARGHELLKEVKFKSEF-----SPDVVT-YTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           A G E L ++ FK  +     + D+ T Y+ ++  Y    K+  A  + +E+    I PS
Sbjct: 159 AVGEEELCDLLFKLVYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPS 218

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
               N L+    +   +  A  + E M SFG   +    S  I+ YC  G +  G K+  
Sbjct: 219 MGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILM 278

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ------------------------ 462
           EMK   +  +V  +TI+I+ALCK + +  A   L +                        
Sbjct: 279 EMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKG 338

Query: 463 --------LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
                   L + ++ P  F+Y+  +   CK GN+ EA+    EM E    PD   +TI+I
Sbjct: 339 RSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIII 398

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            G+C  G + +A     +ML+ G  P   T   LI+   K G    A  ++QR
Sbjct: 399 GGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQR 451



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 3/209 (1%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G K     +++L+D +     +  A  +   +      P +   +SL+    R+ QL+  
Sbjct: 179 GTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLA 238

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             + + M+   +  N    ++ I + C E  +    + L ++K   +      Y  VID 
Sbjct: 239 WDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDA 298

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK   V  A  ++ +M       D V+ + +I G+C KGR  +AI++ N        P+
Sbjct: 299 LCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLN---FFNVRPN 355

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
               +S ++ L K G   EA +  Q  SE
Sbjct: 356 IFVYSSFMTKLCKDGNMLEASKTFQEMSE 384


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 218/448 (48%), Gaps = 16/448 (3%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +++++ I+R+   +L L              S K YNL +RSL    + + +  ++ ++ 
Sbjct: 126 VDAIQAIRRVGGKRLVL--------------SPKCYNLALRSLLRFDMTEYMGKLYSHLV 171

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
            +G LP++      + +  + G    A       R   + M T+  N+LL    + ++  
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           +A ++      +  + + +++ ILIQGL     V++A    + M   GCS ++ TY  LI
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLI 291

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GLC+   +     LL E+  +    P V TY ++I GYCK G+M  A GI   M   G 
Sbjct: 292 KGLCKEGRIHDARGLLDEMPLRG-VVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGC 350

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   T+N LI G    G +  AE +    ++ G+ P V+TF++LI+GYC+  +++  L+
Sbjct: 351 NPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALR 409

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +   M   N   ++  + +LIN L K+ RL +A+  L ++  N L P    Y  +IDG+C
Sbjct: 410 VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYC 469

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G V  A  +   ME + C P+  T+  LI G     ++ +A+++  KM   G  P  I
Sbjct: 470 KVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVI 529

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASED 571
           T  +LI    K    + AFR+ +   ++
Sbjct: 530 TYTTLIQGQCKKHEFDNAFRLFEMMEQN 557



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 204/420 (48%), Gaps = 7/420 (1%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           L F  V+   + +  TY L+++ LC+ G +HD+ + + D M   G +P+       +   
Sbjct: 271 LVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDA-RGLLDEMPLRGVVPSVWTYNAMIDGY 329

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            ++G+   A G+ +           + YNSL+  L      DEA  +          P  
Sbjct: 330 CKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTV 388

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TF  LI G  +   +  A     +M S  C  D+  Y  LI+ L +   +    E L E
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F +  +P+VVTYTS+I GYCK+G +  A  ++  M   G  P+A T+  LI G  +  
Sbjct: 449 M-FANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +  +M   G  P V+T+++LI G C+  + +   +L + M+   L+P+   + 
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           +L +ALCK  R  +A  FL +     +V     Y  ++DGF KAGN D A V++ +M  +
Sbjct: 568 VLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            CK D  T+++L+   C + ++ EA+SI ++M   G   + +    +IS ++K G  + A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 193/410 (47%), Gaps = 5/410 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  D  + + +   + G  P        ++   +A + D A  + S  
Sbjct: 356 TYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +    Y  L+N L+K+    EA     E F     P+  T+  +I G  ++G V
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMV 474

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   GC P+  TY +LI GL +  ++ +   L+ +++ +   +P V+TYT+
Sbjct: 475 GAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ-EDGITPGVITYTT 533

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  + D A  ++  M   G+ P    +NVL D   K G    AE     ++  G
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKG 590

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +   VT++SL+DG+ + G  +    L ++M  +    ++YT+++L+ ALCK+ +LN+A 
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L Q+  + +      Y  +I    K G  D A  +  EM     KP   T+T+ I  +
Sbjct: 651 SILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C  GR+ EA  +  +M R G  PD +T N  I+     G  + AF  ++R
Sbjct: 711 CKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKR 760



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 208/483 (43%), Gaps = 73/483 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y ++++ LCE        V+   M  DG   N       +    + G+   A+GLL + 
Sbjct: 251 SYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEM 310

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  S + YN++++   K     +A+ +     +    PD WT+N LI GL   G++
Sbjct: 311 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKL 369

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL------------------- 318
            +A E      + G +P ++T+  LI+G C+   +     +                   
Sbjct: 370 DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429

Query: 319 ---------LKEVK------FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                    LKE K      F +  +P+VVTYTS+I GYCK+G +  A  ++  M   G 
Sbjct: 430 INVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGC 489

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+A T+  LI G  +   +  A  +  +M   G  P V+T+++LI G C+  + +   +
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 549

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L + M+   L+P+   + +L +ALCK  R  +A  FL +     +V     Y  ++DGF 
Sbjct: 550 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFS 606

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-------------- 529
           KAGN D A V++ +M  + CK D  T+++L+   C + ++ EA+SI              
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666

Query: 530 ---------------------FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
                                FN+M+  G  P   T    IS   K G   EA  ++   
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEM 726

Query: 569 SED 571
             D
Sbjct: 727 ERD 729



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 185/415 (44%), Gaps = 20/415 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++  C+    D+   +F+ M  +G  P+         +  ++G+ + A   L   
Sbjct: 530 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--V 587

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G V ++   Y SL++   K  N D A  + ++      + D +T+++L+Q L +  ++
Sbjct: 588 RKG-VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKL 646

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G   +IV Y  +IS + +  +      L  E+   S   P   TYT 
Sbjct: 647 NEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM-ISSGHKPSATTYTV 705

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            IS YCK+G++++A  +  EM   G+ P  VT+N+ I+G G +G +  A    +RM+   
Sbjct: 706 FISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDAS 765

Query: 398 YLPDVVTFSSLIDGYCRNG----------------QLNQGLKLCDEMKGKNLSPNVYTFT 441
             P+  T+  L+  + +                  +LN   +L + M    L+P V T++
Sbjct: 766 CEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYS 825

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            +I   CK  RL +A   L  +   D+ P   +Y  +I   C      +A   V +M E 
Sbjct: 826 SIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEF 885

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             +P   ++  LI+G C +G    A S+F  +L +    +++    L   LLK G
Sbjct: 886 GFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAG 940



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 162/388 (41%), Gaps = 64/388 (16%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN        TY++++++LC+    +    + D M   G   N       +S  I+ GK 
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D AK L ++        S   Y   +++  K    +EA ++  E  R    PD  T+NI 
Sbjct: 682 DHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIF 741

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI----------------SGLCRVNE 311
           I G   +G + +AF     M    C P+  TY  L+                SG+    E
Sbjct: 742 INGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIE 801

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +    +LL+ +  K   +P VVTY+S+I+G+CK  ++++A  + + M    I P+   + 
Sbjct: 802 LNMVWQLLERM-MKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 860

Query: 372 VLIDG------FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +LI        FGK  + V+       M+ FG+ P + ++  LI G C  G  ++   L 
Sbjct: 861 MLIKCCCDIKLFGKAVSFVT------DMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLF 914

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            ++ G + + N   + IL                                    DG  KA
Sbjct: 915 CDLLGMDYNHNEVAWKIL-----------------------------------NDGLLKA 939

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           G+VD  + ++A M+ + C+ D  ++++L
Sbjct: 940 GHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 134/306 (43%), Gaps = 17/306 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y +++  + + G HD  + +F+ M S GH P++     F+SS  + G+ + A+ L+ + 
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEM 726

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ-------- 269
               VT     YN  +N        D A    K       +P+ WT+ +L++        
Sbjct: 727 ERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLI 786

Query: 270 --------GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
                   G+    E+   ++    M   G +P +VTY+++I+G C+   +     LL  
Sbjct: 787 NAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDH 846

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K + SP+   YT +I   C +    KA     +M   G +P   +++ LI G    G
Sbjct: 847 MLGK-DISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEG 905

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           +   A+ +   +L   Y  + V +  L DG  + G ++   +L   M  ++   +  +++
Sbjct: 906 DYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYS 965

Query: 442 ILINAL 447
           +L +++
Sbjct: 966 MLTDSI 971


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 196/392 (50%), Gaps = 1/392 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  V+  LC     DS  +    M      PN  ++   VS   + GK   A  L  + 
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T   N+L++ L +  + +EA  + KE        D+ ++N LI    + G+V
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++ F+   +M   G  PD+ TYN L+ GLC + ++     L  E K    F PD  TY  
Sbjct: 494 EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF-PDAYTYGI 552

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK  ++++   ++ EM +  I+ +AV +  LI  + + GNM  A  +R+ M S G
Sbjct: 553 MIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG 612

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
                 T+SSLI G    G ++   +L DEM+ + LSPNV  +T LI   CK  +++   
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVD 672

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++  N++ P    Y  +I+G CK GN+  A  ++ EM +K   PD VT+  L  G 
Sbjct: 673 SILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGF 732

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C +G+M EA+ + + M   G + DDIT  +LI
Sbjct: 733 CKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 220/475 (46%), Gaps = 38/475 (8%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +N L  ++R D     LK  E S    + N+    YN ++   C +G   +   + D M 
Sbjct: 274 INGLVKLERFDEANCILK--EMSDRGYAPNNV--VYNTLIDGYCRIGNISTALQIRDDMI 329

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           S+G  PNS      +    ++ + + A+ LL +   G   ++   + S+++ L  +   D
Sbjct: 330 SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFD 389

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A+    E      +P+     +L+ GL + G+  +A E +Y +   G + + VT N LI
Sbjct: 390 SALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449

Query: 304 SGLCRVNEVARGHELLKEV-----------------------------KFKSE-----FS 329
            GLC         +LLKE+                             K K E       
Sbjct: 450 HGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQ 509

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD+ TY  ++ G C +GK+++A G+++E    G  P A T+ ++IDG+ K   +   E +
Sbjct: 510 PDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKL 569

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + M++     + V + +LI  YC NG + +  +L D+M+ + +     T++ LI+ L  
Sbjct: 570 FQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSN 629

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              ++ A + L +++   L P    Y  +I G+CK G + + + I+ EM      P+K+T
Sbjct: 630 IGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKIT 689

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +TI+I GHC  G M  A  + N+M + G  PD +T N+L +   K G   EA ++
Sbjct: 690 YTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKV 744



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 218/444 (49%), Gaps = 5/444 (1%)

Query: 135 NPKLGLKFLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPN 190
           NP+    F  F+   L     +    +L++        H    VVF+    + + G  P+
Sbjct: 102 NPRTAFNFFHFASETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPS 161

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                F +SS ++A +   +  +        VT   +++++++NA       D+A+ +F+
Sbjct: 162 LKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFR 221

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           +  ++   P+  T+N +I GL + G + +AF+F   M      P +VTY  LI+GL ++ 
Sbjct: 222 KMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLE 281

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
                + +LKE+  +  ++P+ V Y ++I GYC++G +  A  I ++M S GI P++VT 
Sbjct: 282 RFDEANCILKEMSDRG-YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTC 340

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N LI G+ K   M  AE++ E ML+ G + +  TF+S+I   C   + +  L    EM  
Sbjct: 341 NSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLL 400

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           +N  PN    T+L++ LC+  + ++A     +L            N +I G C+AG+ +E
Sbjct: 401 RNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  ++ EM E+    D +++  LI+  C +G++ E   +  +M+R G  PD  T N L+ 
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520

Query: 551 CLLKGGMPNEAFRIMQRASEDQNL 574
            L   G   EA  +     ++ N 
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNF 544



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 182/356 (51%), Gaps = 1/356 (0%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           L++  LC+ G       ++  +   G   N+      +     AG  + A  LL +    
Sbjct: 412 LLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER 471

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
            + + +  YN+L+ A  K+   +E   + +E  R   QPD +T+N+L+ GL  +G++++A
Sbjct: 472 GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEA 531

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
              +++    G  PD  TY  +I G C+ N V  G +L +E+    +   + V Y ++I 
Sbjct: 532 GGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM-VTMKIEQNAVVYGTLIR 590

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
            YC+ G M +A  + ++M S GI  ++ T++ LI G   +G + SA  + + M   G  P
Sbjct: 591 AYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP 650

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           +VV +++LI GYC+ GQ+++   +  EM   N+ PN  T+TI+IN  CK   +  A + L
Sbjct: 651 NVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLL 710

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            ++    +VP    YN + +GFCK G ++EA  +   M       D +T+T LI G
Sbjct: 711 NEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 201/447 (44%), Gaps = 34/447 (7%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           ++ ++ + C  G  D    +F  M   G  PN       +    + G+ D A     +  
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  S   Y  L+N LVK    DEA  + KE       P+   +N LI G  RIG + 
Sbjct: 260 KERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIS 319

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV---------------- 322
            A +   DM S G SP+ VT N+LI G C+ N++     LL+E+                
Sbjct: 320 TALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVI 379

Query: 323 -------KFKS-----------EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                  +F S            F P+    T ++SG C+ GK  +A  ++  +   G  
Sbjct: 380 HRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFA 439

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
            + VT N LI G  + G+   A  + + ML  G + D +++++LI   C+ G++ +G KL
Sbjct: 440 ANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKL 499

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +EM  + + P++YT+ +L++ LC   ++ +A     + K N   P  + Y  +IDG+CK
Sbjct: 500 KEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCK 559

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           A  V+E   +  EM   + + + V +  LI  +C  G M EA  + + M   G      T
Sbjct: 560 ANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSAT 619

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASED 571
            +SLI  L   G+ + A +++    ++
Sbjct: 620 YSSLIHGLSNIGLVDSANQLLDEMRKE 646



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 207/464 (44%), Gaps = 39/464 (8%)

Query: 138 LGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
            G+ F  FS + N  L  S KT N ++ SL +         VFD M   G  P+  +   
Sbjct: 143 FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFST 202

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RL 255
            V++    G+ D A  L  +     V  +   YN++++ L K    DEA + FKE   + 
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEA-FQFKEKMEKE 261

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +P   T+ +LI GL ++    +A     +M   G +P+ V YNTLI G CR+  ++  
Sbjct: 262 RVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTA 321

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG------------- 362
            + +++    +  SP+ VT  S+I GYCK  +M+ A  +  EM + G             
Sbjct: 322 LQ-IRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIH 380

Query: 363 ----------------------IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
                                  KP+     +L+ G  + G    A  +  R+L  G+  
Sbjct: 381 RLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAA 440

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           + VT ++LI G C  G   +  KL  EM  + L  +  ++  LI A CKE ++ +  +  
Sbjct: 441 NTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLK 500

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           +++    + P  + YN ++ G C  G ++EA  +  E ++    PD  T+ I+I G+C  
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            R+ E   +F +M+ +    + +   +LI    + G   EAFR+
Sbjct: 561 NRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRL 604



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 36/257 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC MG  +    ++   + +G+ P++      +    +A + +  + L  + 
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT-WTFNILIQGLSRIGE 276
              ++  +  +Y +L+ A  +  N  EA +  ++  R    P T  T++ LI GLS IG 
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCENGNMREA-FRLRDDMRSRGIPQTSATYSSLIHGLSNIGL 632

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-------------- 322
           V  A +   +M   G SP++V Y  LI G C++ ++ +   +L+E+              
Sbjct: 633 VDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTI 692

Query: 323 ---------------KFKSEFS-----PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                          K  +E +     PD VTY ++ +G+CK GKM++A  + + M++ G
Sbjct: 693 MINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGG 752

Query: 363 IKPSAVTFNVLIDGFGK 379
           I    +T+  LIDG+ K
Sbjct: 753 ISLDDITYTTLIDGWHK 769



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 5/199 (2%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V + +  +   Y  ++R+ CE G       + D MRS G    S      +      G  
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLV 633

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D+A  LL + R   ++ +   Y +L+    K     +   + +E       P+  T+ I+
Sbjct: 634 DSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIM 693

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  ++G +K A +   +M   G  PD VTYN L +G C+  ++    E LK     S 
Sbjct: 694 INGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKM---EEALKVCDLMST 750

Query: 328 --FSPDVVTYTSVISGYCK 344
              S D +TYT++I G+ K
Sbjct: 751 GGISLDDITYTTLIDGWHK 769


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 220/480 (45%), Gaps = 37/480 (7%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L  I ++    L + F E   + L ++H+  TYN+++  LC          +   M   G
Sbjct: 72  LSAIAKMKKFDLVISFGEKMEI-LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           + P+   +   ++      +   A  L+ Q         T  + +L++ L + N A EAV
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            + +       QPD  T+  +I GL + GE   A      M       D+V Y+T+I  L
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+   V     L  E+  K    PDV TY+S+IS  C  G+   A+ + ++M    I P+
Sbjct: 251 CKYRHVDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VTFN LID F K G ++ AE + + M+     P++VT++SLI+G+C + +L++  ++  
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLND------------------------------- 455
            M  K+  P+V T+  LIN  CK  ++ D                               
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429

Query: 456 ----ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
               A+   KQ+  + + P    YN ++DG CK G +++A V+   +++ + +PD  T+ 
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           I+  G C  G++ +   +F  +   G  PD I  N++IS   K G+  EA+ +  +  ED
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 186/361 (51%), Gaps = 9/361 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+     NSLLN     N   EAV +  +   +  QPDT TF  L+ GL +  +
Sbjct: 131 YGPSIVTL-----NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M   GC PD+VTY  +I+GLC+  E      LL +++ K +   DVV Y+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEADVVIYS 244

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +VI   CK   +D A  ++ EM++ GI+P   T++ LI      G    A  +   ML  
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+VVTF+SLID + + G+L +  KL DEM  +++ PN+ T+  LIN  C  +RL++A
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++    +   D +P    YN +I+GFCKA  V +   +  +M  +    + VT+T LI G
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
                    A  +F +M+  G  P+ +T N+L+  L K G   +A   F  +Q++  + +
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484

Query: 574 L 574
           +
Sbjct: 485 I 485



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 197/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++  L +         + + M   G  P+       ++   + G+ D A  LL++ 
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G++     +Y++++++L K  + D+A+ +F E      +PD +T++ LI  L   G  
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     DM     +P++VT+N+LI    +  ++    +L  E+  +    P++VTY S
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM-IQRSIDPNIVTYNS 350

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+C   ++D+A  I+  M S    P  VT+N LI+GF K   +V    +   M   G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + VT+++LI G+ +    +    +  +M    + PN+ T+  L++ LCK  +L  A 
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + L+ + + P  + YN + +G CKAG V++   +   +  K  KPD + +  +I G 
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C KG   EA ++F KM   G  PD  T N+LI   L+ G
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 198/405 (48%), Gaps = 2/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+ G  D    + + M       +  +    + S  +    D A  L ++ 
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F Y+SL++ L       +A  +  +       P+  TFN LI   ++ G++
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F +M      P+IVTYN+LI+G C  + +    ++   +    +  PDVVTY +
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT-LMVSKDCLPDVVTYNT 385

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+CK  K+     ++ +M+  G+  + VT+  LI GF +  +  +A+ + ++M+S G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++T+++L+DG C+NG+L + + + + ++   + P++YT+ I+   +CK  ++ D  
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I GFCK G  +EA  +  +M+E    PD  T+  LI  H
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              G    +  +  +M     A D  T   L++ +L  G  ++ F
Sbjct: 566 LRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGF 609



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 178/367 (48%), Gaps = 8/367 (2%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L  +        S   ++ LL+A+ K    D  +   ++   L    + +T+N
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           I+I  L R  ++  A      M   G  P IVT N+L++G C  N ++    L+ ++  +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VE 163

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             + PD VT+T+++ G  +  K  +A  +   M   G +P  VT+  +I+G  K G    
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +  +M       DVV +S++ID  C+   ++  L L  EM  K + P+V+T++ LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC   R +DA R L  +    + P    +N +ID F K G + EA  +  EM ++   P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG-----GMPNE 560
           + VT+  LI G CM  R+ EA  IF  M+   C PD +T N+LI+   K      GM  E
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM--E 401

Query: 561 AFRIMQR 567
            FR M R
Sbjct: 402 LFRDMSR 408



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 153/305 (50%), Gaps = 10/305 (3%)

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF---SPDV 332
           ++ +A + F +M      P IV ++ L+S + ++ +     +L+     K E    S ++
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKF----DLVISFGEKMEILGVSHNL 100

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  +I+  C+  ++  A  I  +M   G  PS VT N L++GF     +  A  + ++
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  GY PD VTF++L+ G  ++ + ++ + L + M  K   P++ T+  +IN LCK   
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            + A   L +++   +     +Y+ VID  CK  +VD+A  +  EM+ K  +PD  T++ 
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRAS 569
           LI   C  GR  +A  + + ML     P+ +T NSLI    K G   EA   F  M + S
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340

Query: 570 EDQNL 574
            D N+
Sbjct: 341 IDPNI 345


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 204/418 (48%), Gaps = 11/418 (2%)

Query: 158 TYNLVMRSLCEMG-------LHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDA 209
           TY  +++ LC  G       LH   +++ D  R + +  PN       V    + G+ D 
Sbjct: 176 TYGTLIKGLCGTGNINIALKLHQ--EMLNDISRYEINCKPNVITYNIIVDGLCKVGREDE 233

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           AK L  + +   +  S   YNSL++        +E+  +  E      QPD  TFN+LI 
Sbjct: 234 AKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLID 293

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L + G+V +A +    M   G  PD+VTYN+LI G C V ++    EL   +  K    
Sbjct: 294 TLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG-CE 352

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV++Y  +I+GY K  K+++A  +YNEM   G +P+ +T++ L+ G    G +  A+ +
Sbjct: 353 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 412

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M + G   +  T+   +DG C+N  L + +KL  E+K  N    +     LI+ LCK
Sbjct: 413 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 472

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             +L  A    ++L      P    Y  +I GFC+ G VD+ANV++ +ME   C PD +T
Sbjct: 473 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 532

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  L+ G     ++ E + + ++M +   +PD IT + ++  L K     E   ++ R
Sbjct: 533 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPR 590



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 212/419 (50%), Gaps = 7/419 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA----KGL 213
           TYN +++ LC          +F  M+  G  P+       +      G  + A    + +
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200

Query: 214 LSQFRPGEVTM--STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           L+     E+    +   YN +++ L K    DEA  +F+E       P   ++N LI G 
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGF 260

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              G+ +++     +M   G  PD+VT+N LI  LC+  +V    +LL  V  +S   PD
Sbjct: 261 CCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG-VMIESGIVPD 319

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +VTY S+I G+C +G ++ A  ++  M S G +P  +++NVLI+G+ K   +  A  +  
Sbjct: 320 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 379

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            ML  G  P+V+T+ SL+ G    G+++   KL   MK   ++ N YT+ I ++ LCK +
Sbjct: 380 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKND 439

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L +A +   +LK ++   +    N +IDG CKAG ++ A  +  ++  +  +P+ VT+T
Sbjct: 440 CLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYT 499

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           I+I G C +G++ +A  +  KM   GC PD IT N+L+    +     E  +++ R ++
Sbjct: 500 IMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQ 558



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 219/463 (47%), Gaps = 32/463 (6%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRS---------------LCEMGLHDSVQVVF 179
           NP++          N++  H+   ++L+MRS               L ++  +  V  ++
Sbjct: 33  NPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLY 92

Query: 180 DYMRSDGHLPNSPMIEFFVSSC-----IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
           + MR  G   +   +   ++       +R G    A  L   + P  VT     YN+L+ 
Sbjct: 93  NQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVT-----YNTLIK 147

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS----- 289
            L  ++   EA  +F    +L   PD  T+  LI+GL   G +  A +   +M +     
Sbjct: 148 GLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRY 207

Query: 290 -FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
              C P+++TYN ++ GLC+V       +L +E+K +    P +++Y S+I G+C  GK 
Sbjct: 208 EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI-PSIISYNSLIHGFCCAGKW 266

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           +++  + +EM   G++P  VTFNVLID   K G ++ A+ +   M+  G +PD+VT++SL
Sbjct: 267 EESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 326

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G+C  G LN   +L   M  K   P+V ++ +LIN   K  ++ +A +   ++     
Sbjct: 327 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 386

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y+ ++ G   AG VD+A  + + M+      +  T+ I + G C    + EA+ 
Sbjct: 387 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +F ++       +   +N LI  L K G    A+ + ++ S +
Sbjct: 447 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 489


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 203/402 (50%), Gaps = 2/402 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S ++YN +M  L E    D    V+  MR  G +P+       + S  R  +  AA+ LL
Sbjct: 110 SVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLL 169

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +         S   Y +++    ++N+  EA  +F+E   L   PD   FN LI  L R 
Sbjct: 170 NNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRK 229

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V+++      +   G SP++ T N  I G C+   +     LL  V      +PDV+T
Sbjct: 230 GHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG--RGLTPDVIT 287

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G CK  K+ +A     +M + G +P   T+N +IDG+ K+G M +A+ +     
Sbjct: 288 YNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGA 347

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G++PD  T+ SLI+G C++G +++ + + +E   K L PN+     L+  L ++  + 
Sbjct: 348 FKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLIL 407

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + + ++  N   P  + YN VI+G CK G V +A+ +V +   K   PD  TF  LI
Sbjct: 408 QALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLI 467

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            G+C K ++  AI I ++M   G +PD IT NS+++ L K G
Sbjct: 468 DGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG 509



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 211/444 (47%), Gaps = 22/444 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C++G+  +   +       G +P+       ++   + G  D A  + ++ 
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +  + N+L+  L +Q    +A+ +  E       PD WT+N++I GL +IG V
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCV 441

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     D  + G  PD+ T+NTLI G C+  ++    E++  + +    SPDV+TY S
Sbjct: 442 SDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRM-WNHGVSPDVITYNS 500

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK GK +   G +  M   G  P+ +T+N+L + F K   +  A  + E M + G
Sbjct: 501 ILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKG 560

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCKENRLNDA 456
             PDVV F +L+ G+C NG L+   +L   +  +   S  + T+ I+INA   +  +N A
Sbjct: 561 LTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMA 620

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +   ++  N   P  + Y  +IDGFCK GN++     +    EK   P   TF  ++  
Sbjct: 621 EKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNC 680

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC---------------LLKGGMPNEA 561
            C+K R+ EA+ I + M+  G  P+   VN++                  + KG +   A
Sbjct: 681 LCLKRRVHEAVGIIHLMVHKGIVPE--VVNTIFEADKKEVAAPKIVVENLMKKGHITYFA 738

Query: 562 FRIMQRASEDQNL---QLPSWKKA 582
           + I+     D+ L   +LP+ +K 
Sbjct: 739 YEILHDGIRDKKLSRKKLPTSQKV 762



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 200/394 (50%), Gaps = 4/394 (1%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +F+ M   G  P+       + +  R G    ++ LL++     V+ + F  N  +    
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           ++   +EA+ +     R  + PD  T+N LI GL +  +V +A  +   M + G  PD  
Sbjct: 263 QRAMLNEAIRLLDGVGRGLT-PDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGF 321

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYN++I G C++  +    ++L++  FK  F PD  TY S+I+G C+ G +D+A  ++NE
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKG-FVPDESTYCSLINGLCQDGDIDRAINVFNE 380

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
               G+KP+ V  N L+ G  + G ++ A  +   M   G  PD+ T++ +I+G C+ G 
Sbjct: 381 AMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGC 440

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV-PKPFMYN 476
           ++    L  +   K   P+V+TF  LI+  CK+ +L++A   + ++ WN  V P    YN
Sbjct: 441 VSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRM-WNHGVSPDVITYN 499

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +++G CKAG  ++       M EK C P+ +T+ IL    C   ++ EA+++  +M   
Sbjct: 500 SILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNK 559

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G  PD +   +L+      G  + A+++ +R  E
Sbjct: 560 GLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDE 593



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 200/418 (47%), Gaps = 18/418 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN ++  LC+       +     M ++G+ P+       +    + G    A  +L   
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P E T     Y SL+N L +  + D A+ +F E      +P+    N L++GLS
Sbjct: 347 AFKGFVPDEST-----YCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLS 401

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G + +A +   +M   GCSPDI TYN +I+GLC++  V+    L+ +   K    PDV
Sbjct: 402 QQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL-PDV 460

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+ ++I GYCK  K+D A  I + M + G+ P  +T+N +++G  K G         + 
Sbjct: 461 FTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKL 520

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G +P+++T++ L + +C+  ++ + L L +EM+ K L+P+V  F  L+   C    
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580

Query: 453 LNDARRFLK----QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           L+ A +  K    Q K++  +     YN +I+ F    N++ A  +  +M E    PD  
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIAT---YNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSY 637

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           T+ ++I G C  G +    S     +  G  P   T   +++CL      +EA  I+ 
Sbjct: 638 TYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIH 695



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 164/338 (48%), Gaps = 35/338 (10%)

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++   R G++++A + F  M  F C P + +YN +++ L       + H++   ++ K  
Sbjct: 83  MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKG- 141

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV T+T  +  +C+  +   A  + N M S G + SAV +  +I GF +  + V A 
Sbjct: 142 IVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAH 201

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E ML  G  PD++ F+ LI   CR G + +  +L +++  + +SPN++T  I I   
Sbjct: 202 ELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGF 261

Query: 448 CKENRLNDARRFLKQ---------LKWNDLV-------------------------PKPF 473
           C+   LN+A R L           + +N L+                         P  F
Sbjct: 262 CQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGF 321

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN +IDG+CK G +  A+ I+ +   K   PD+ T+  LI G C  G +  AI++FN+ 
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +  G  P+ +  N+L+  L + G+  +A ++M   SE+
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN 419



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 145/342 (42%), Gaps = 46/342 (13%)

Query: 279 KAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           KA E F  +    G    ++TY  +I  L    E     E+L E +   +       Y  
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIG 81

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +  Y + GK+ +A  ++  M+    +PS  ++N +++   +      A  +  RM   G
Sbjct: 82  AMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKG 141

Query: 398 YLPDVVTFSSLIDGYCR-----------NGQLNQGL------------------------ 422
            +PDV TF+  +  +CR           N   +QG                         
Sbjct: 142 IVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAH 201

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L +EM G  + P++  F  LI+ LC++  + ++ R L ++    + P  F  N  I GF
Sbjct: 202 ELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGF 261

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+   ++EA + + +   +   PD +T+  LI G C   ++VEA     KM+  G  PD 
Sbjct: 262 CQRAMLNEA-IRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDG 320

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVP 584
            T NS+I    K GM       MQ A  DQ L+  ++K  VP
Sbjct: 321 FTYNSIIDGYCKLGM-------MQNA--DQILRDGAFKGFVP 353


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 208/421 (49%), Gaps = 2/421 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            F  ++ +   L E+G+ ++    F  M     LP +     F+    +AG+ D ++   
Sbjct: 61  GFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFF 120

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  +  + F YN ++  + K+ +   A  +F++  ++   PD  T+N LI G  +I
Sbjct: 121 RDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKI 180

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + ++   F +M   GC PD++TYN LI+  C+   + R  E  +E+K K +  P+V++
Sbjct: 181 GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDK-DLKPNVIS 239

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+++I   CK G M  A   + +M   G+ P+  T++ LID   K GN+  A  + + ML
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 ++VT+++L+DG C  G +N+  +L   M    ++PN+  +T LI+   K   ++
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A     +++  D+ P   ++  ++ G C    ++E  +I+ EM+E     + V +T L+
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
             +   G   EAI++  +M  +G     +T  +LI  L K G+  EA     R   D +L
Sbjct: 420 DAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMP-DHDL 478

Query: 575 Q 575
           Q
Sbjct: 479 Q 479



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 1/380 (0%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           +P   + +   S  +  G  +AA     +     V       N+ L+ L K    D +  
Sbjct: 59  VPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD 118

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
            F++       P  +T+NI+I  + + G++  A   F  M   G +PDIVTYNTLI G  
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           ++  +     L +E+KF     PDV+TY ++I+ +CK   M +A   + EM    +KP+ 
Sbjct: 179 KIGLLDESVCLFEEMKFMG-CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           ++++ LID   K G M  A      M   G LP+  T+SSLID  C+ G L +   L DE
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  +++  N+ T+T L++ LC+E  +N+A    + +    + P    Y  +I G  K  +
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +D+A  +  EM EK  KPD + +  ++ G C + ++ E   I  +M   G   + +   +
Sbjct: 358 MDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTT 417

Query: 548 LISCLLKGGMPNEAFRIMQR 567
           L+    K G   EA  +++ 
Sbjct: 418 LMDAYFKAGNRTEAINLLEE 437



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 200/435 (45%), Gaps = 3/435 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ S C+          F  M+     PN       + +  + G    A       
Sbjct: 204 TYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDM 263

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + F Y+SL++A  K  N  EA  +  E  + +   +  T+  L+ GL   G +
Sbjct: 264 TRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMM 323

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F  MG  G +P++  Y  LI G  +V  + +  EL  E++ K +  PD++ + +
Sbjct: 324 NEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREK-DIKPDILLWGT 382

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C   K+++   I  EM   GI  + V +  L+D + K GN   A  + E M   G
Sbjct: 383 IVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLG 442

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               VVTF +LIDG C+ G + + +     M   +L PNV  +T LI+ LCK N + DA+
Sbjct: 443 TEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAK 502

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   +++  +++P    Y  +IDG  K GN  EA  +  +M E   + D   +T L+ G 
Sbjct: 503 KLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGL 562

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
              G++ +A     +M+  G  PD+     L+    + G  +EA  +     E + L   
Sbjct: 563 SQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVE-KGLIHG 621

Query: 578 SWKKAVP-LRTNTDI 591
           +   AVP ++T  D+
Sbjct: 622 NSNPAVPNIQTRDDL 636



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 202/416 (48%), Gaps = 1/416 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           + L     TYN ++    ++GL D    +F+ M+  G  P+       ++S  +      
Sbjct: 161 MGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLR 220

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A     + +  ++  +   Y++L++AL K+     A+  F +  R+   P+ +T++ LI 
Sbjct: 221 AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLID 280

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G + +AF    +M       +IVTY TL+ GLC    +    EL + +  K+  +
Sbjct: 281 ANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMG-KAGVT 339

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P++  YT++I G+ K+  MDKA  ++NEM    IKP  + +  ++ G      +   + +
Sbjct: 340 PNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKII 399

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G   + V +++L+D Y + G   + + L +EM+       V TF  LI+ LCK
Sbjct: 400 MTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCK 459

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              + +A  +  ++  +DL P   +Y  +IDG CK   + +A  +  EM++K   PDK+ 
Sbjct: 460 RGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIA 519

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +T +I G+   G   EA+++ NKM+ +G   D     SL+  L + G   +A + +
Sbjct: 520 YTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFL 575



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 160/312 (51%), Gaps = 1/312 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P    F+ L   L  +G ++ A + F  M  F   P   + N  +  L +  E     + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            +++   +  +P V TY  +I   CK G M  A  ++ +M   G+ P  VT+N LIDG+G
Sbjct: 120 FRDM-VGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K+G +  +  + E M   G  PDV+T+++LI+ +C+   + +  +   EMK K+L PNV 
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVI 238

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           +++ LI+ALCKE  +  A +F   +    L+P  F Y+ +ID  CKAGN+ EA ++  EM
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            ++    + VT+T L+ G C +G M EA  +F  M + G  P+     +LI   +K    
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358

Query: 559 NEAFRIMQRASE 570
           ++A  +     E
Sbjct: 359 DKAMELFNEMRE 370



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 3/400 (0%)

Query: 140 LKFLEFSRV--NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           L+  EF R   +  L  +  +Y+ ++ +LC+ G+       F  M   G LPN       
Sbjct: 219 LRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSL 278

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           + +  +AG    A  L  +     V ++   Y +LL+ L ++   +EA  +F+   +   
Sbjct: 279 IDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGV 338

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P+   +  LI G  ++  + KA E F +M      PDI+ + T++ GLC  +++     
Sbjct: 339 TPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKI 398

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           ++ E+K +S    + V YT+++  Y K G   +A  +  EM   G + + VTF  LIDG 
Sbjct: 399 IMTEMK-ESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGL 457

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G +  A Y   RM      P+V  +++LIDG C+N  +    KL DEM+ KN+ P+ 
Sbjct: 458 CKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDK 517

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
             +T +I+   K     +A     ++    +    + Y  ++ G  + G V +A   +AE
Sbjct: 518 IAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAE 577

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           M  K   PD+   T L+  H   G + EAI + N+++  G
Sbjct: 578 MIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 178/330 (53%), Gaps = 1/330 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           + +N L++   K  +   A  +F E  +   +P   +FN LI G  + G+V++ F     
Sbjct: 249 YFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGV 308

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M S G  PD+ T++ LI+GLC+   +  G  L  E+  +    P+ VT+T++I G CK G
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG-LVPNGVTFTTLIDGQCKGG 367

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+D A   +  M + G++P  VT+N LI+G  KVG++  A  +   M + G  PD +TF+
Sbjct: 368 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFT 427

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +LIDG C++G +   L++   M  + +  +   FT LI+ LC+E R++DA R L  +   
Sbjct: 428 TLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSA 487

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    Y  VID FCK G+V     ++ EM+     P  VT+  L+ G C +G+M  A
Sbjct: 488 GFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNA 547

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             + + ML +G AP+DIT N L+    K G
Sbjct: 548 KMLLDAMLNVGVAPNDITYNILLDGHSKHG 577



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 176/356 (49%), Gaps = 4/356 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N++M   C+ G   + ++VFD +   G  P        +S C ++G  +    L     
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V    F +++L+N L K+   DE   +F E       P+  TF  LI G  + G+V 
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A + F  M + G  PD+VTYN LI+GLC+V ++     L+ E+   S   PD +T+T++
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT-ASGLKPDKITFTTL 429

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G M+ A  I   M   GI+   V F  LI G  + G +  A  M   MLS G+
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T++ +ID +C+ G +  G KL  EM+     P V T+  L+N LCK+ ++ +A+ 
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKM 549

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            L  +    + P    YN ++DG  K G+  + ++  +   EK    D  ++T L+
Sbjct: 550 LLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNS---EKGLVTDYASYTALV 602



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 181/350 (51%), Gaps = 3/350 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLS-RIGEVKKAFEFF 284
            ++++L++A V      +AV  F+   +  +  P     N+L + +  R  E+++++  +
Sbjct: 177 LVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALY 236

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            ++   G  P I  +N L+ G C+  +V     +  E+  K    P VV++ ++ISG CK
Sbjct: 237 LEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIP-KRGLRPTVVSFNTLISGCCK 295

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G +++   +   M S G+ P   TF+ LI+G  K G +     + + M   G +P+ VT
Sbjct: 296 SGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVT 355

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F++LIDG C+ G+++  LK    M  + + P++ T+  LIN LCK   L +ARR + ++ 
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT 415

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            + L P    +  +IDG CK G+++ A  I   M E+  + D V FT LI G C +GR+ 
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           +A  +   ML  G  PDD T   +I C  K G     F++++    D ++
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHV 525



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 150/300 (50%), Gaps = 14/300 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA----KGL 213
           T++ ++  LC+ G  D   ++FD M   G +PN       +    + GK D A    + +
Sbjct: 320 TFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMM 379

Query: 214 LSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L+Q  RP  VT     YN+L+N L K  +  EA  +  E      +PD  TF  LI G  
Sbjct: 380 LAQGVRPDLVT-----YNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCC 434

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G+++ A E    M   G   D V +  LISGLCR   V     +L ++   + F PD 
Sbjct: 435 KDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDM-LSAGFKPDD 493

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TYT VI  +CK G +     +  EM S G  P  VT+N L++G  K G M +A+ + + 
Sbjct: 494 PTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML+ G  P+ +T++ L+DG+ ++G  +  + + +  KG  L  +  ++T L+N   K ++
Sbjct: 554 MLNVGVAPNDITYNILLDGHSKHGS-SVDVDIFNSEKG--LVTDYASYTALVNESSKTSK 610


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 201/432 (46%), Gaps = 3/432 (0%)

Query: 141 KFLEFSRVNLSLNHSFK--TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           K L+F +  L+  + F   TY  ++  L + G   +   +   M      PN  M    +
Sbjct: 143 KALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               + G    A GL SQ     + +    YNSL++         E   +  +  R    
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD +TFNILI  L + G + +A      M   G  PDIVTYN L+ G C    V    EL
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
              +  K    PDV+ Y  +I GYCK   +D+A  ++ E+ +  + P+  ++N LIDG  
Sbjct: 323 FNRM-VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
             G +   + + + M      PDVVT++ LID  C+ G++ + L +   M  K + PN+ 
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIV 441

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  +++  C  N +N A+    ++  + L P    YN +I+G+CK   VDEA V+  EM
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K   PD  ++  LI G C  GR+     + ++M   G +PD IT N L+    K    
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561

Query: 559 NEAFRIMQRASE 570
           ++A  + ++  E
Sbjct: 562 DKAISLFRQIVE 573



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 196/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C  G+          + + G+L +       ++   + G+  AA  LL + 
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  MY++L++ L K     +A+ +  +        D  T+N LI G   +G  
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++  +    M      PD  T+N LI  LC+   +     +L  +  + E  PD+VTY +
Sbjct: 247 QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNA 305

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC    + +A  ++N M   G++P  + +NVLIDG+ K   +  A  + + + +  
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P + +++SLIDG C +G+++   KL DEM G    P+V T+ ILI+ALCKE R+ +A 
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P    YN ++DG+C   NV+ A  I   M +   +PD + + +LI G+
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C    + EAI +F +M      PD  + NSLI  L   G
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 205/444 (46%), Gaps = 35/444 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C +G    V  +   M  +   P+       + +  + G+   A+G+L+  
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN+L+     + N  EA  +F    +   +PD   +N+LI G  +   V
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F ++ +    P I +YN+LI GLC    ++   +LL E+   ++  PDVVTY  
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ-PPDVVTYNI 410

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G++ +A G+   M   G+KP+ VT+N ++DG+    N+  A+ +  RM+  G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++ ++ LI+GYC+   +++ + L  EM+ KNL P++ ++  LI+ LC   R+   +
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE----------------- 500
             L ++  +   P    YN ++D FCK    D+A  +  ++ E                 
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLC 590

Query: 501 -----------------KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
                              C P+  T+TILI   C  G   EA+ + +KM      PD I
Sbjct: 591 KGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650

Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
           T   +I  LL+    ++A ++ + 
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREE 674



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 190/397 (47%), Gaps = 36/397 (9%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P + + +  + + +R G    A  L +Q +   ++ S   +  L+N    Q++   A  +
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                +   QP+  TFN +I G    G + KA +F  ++ + G   D  TY TLI+GL +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 309 VNEVARGHELLKEVKFKSEFSP-----------------------------------DVV 333
             ++     LL+E++ KS   P                                   D V
Sbjct: 173 NGQIKAALHLLQEME-KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S+I G C +G+  + T +  +M    + P   TFN+LID   K G ++ A+ +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  PD+VT+++L++GYC    +++  +L + M  + L P+V  + +LI+  CK   +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A    K+L   +LVP    YN +IDG C +G +     ++ EM      PD VT+ IL
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           I   C +GR++EA+ +   M++ G  P+ +T N+++ 
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 169/327 (51%), Gaps = 1/327 (0%)

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           N D+AV  F    R++  P T  F+ L+  + R+G    A   F  + S G SP I T+ 
Sbjct: 35  NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI+     +  A    LL  +  KS + P++VT+ ++I+G+C  G + KA      + +
Sbjct: 95  ILINCYFHQSHTAFAFSLLATI-LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G      T+  LI+G  K G + +A ++ + M      P++V +S+LIDG C++G ++ 
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L LC ++  + +  +  T+  LI+  C   R  +  + L ++   ++ P  + +N +ID
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             CK G + EA  ++A M ++  KPD VT+  L+ G+C +  + EA  +FN+M++ G  P
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           D +  N LI    K  M +EA  + + 
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKE 360



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 156/340 (45%), Gaps = 2/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C+  + D   V+F  + +   +P        +     +G+    K LL +  
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                     YN L++AL K+    EA+ +     +   +P+  T+N ++ G      V 
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVN 457

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A + F  M   G  PDI+ YN LI+G C+   V     L KE++ K+   PD+ +Y S+
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN-LIPDIASYNSL 516

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G C LG++     + +EM   G  P  +T+N+L+D F K      A  +  +++  G 
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GI 575

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T  +++D  C+  +L         +     SPNV T+TILINALCK+    +A  
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            L +++ ND  P    +  +I    +    D+A  +  EM
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 156/329 (47%), Gaps = 4/329 (1%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N +L  +  +YN ++  LC  G    V+ + D M      P+       + +  + G+  
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A G+L       V  +   YN++++    +NN + A  +F    +   +PD   +N+LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  +   V +A   F +M      PDI +YN+LI GLC +  +    ELL E+   S  
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM-CDSGQ 541

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SPDV+TY  ++  +CK    DKA  ++ ++   GI P   T + ++D   K   +  AE 
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAED 600

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
             + +L  G  P+V T++ LI+  C++G   + + L  +M+  +  P+  TF I+I  L 
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660

Query: 449 KENRLNDARRFLKQLKWNDLV--PKPFMY 475
           + N  + A +  +++    LV   K  MY
Sbjct: 661 QRNETDKAEKLREEMIARGLVNIEKRLMY 689



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 124/241 (51%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P    +  ++    ++G    A  ++ ++ S GI PS  TF +LI+ +    +   A  +
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              +L  GY P++VTF+++I+G+C NG + + L  C  +  +    + +T+  LIN L K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             ++  A   L++++ + + P   MY+ +IDG CK G V +A  + +++ E+    D VT
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  LI G C  GR  E   +  KM+R    PDD T N LI  L K G   EA  ++   S
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 570 E 570
           +
Sbjct: 293 K 293


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N ++   C+ GL D    V D M + G  P +     ++ +    G+ D A+ LLS  
Sbjct: 347 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 406

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V      YN+L++  +K     EA  +F +       P   T+N LI GL   G +
Sbjct: 407 AAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 462

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A     +M +    PD++TY TL+ G  +   ++   E+  E+  +    PD   YT+
Sbjct: 463 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM-LRKGIKPDGYAYTT 521

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIK-PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
              G  +LG  DKA  ++ EM +     P    +NV IDG  KVGN+V A   + ++   
Sbjct: 522 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 581

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD VT++++I GY  NGQ      L DEM  K L P+V T+ +LI    K  RL  A
Sbjct: 582 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 641

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            ++  ++K   + P    +N ++ G CKAGN+DEA   + +MEE+   P+K ++T+LI  
Sbjct: 642 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 701

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +C   +  E + ++ +ML     PD  T  +L   L K
Sbjct: 702 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 739



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 218/481 (45%), Gaps = 55/481 (11%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +  N+V++ L +  + +    V++ M   G +P        + SC +AG  +    + 
Sbjct: 239 SVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIW 298

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +   +  S   YN L+N   K    +EA     +  R       ++FN LI+G  + 
Sbjct: 299 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ 358

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G    A+    +M + G  P   TYN  I  LC    +    ELL  +      +PDVV+
Sbjct: 359 GLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA-----APDVVS 413

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +++ GY K+GK  +A+ +++++ +  I PS VT+N LIDG  + GN+  A+ ++E M 
Sbjct: 414 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 473

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT------------- 441
           +    PDV+T+++L+ G+ +NG L+   ++ DEM  K + P+ Y +T             
Sbjct: 474 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 533

Query: 442 -----------------------ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
                                  + I+ LCK   L  A  F +++    LVP    Y  V
Sbjct: 534 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 593

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I G+ + G    A  +  EM  KR  P  +T+ +LI GH   GR+ +A     +M + G 
Sbjct: 594 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 653

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED--------------QNLQLPSWKKAVP 584
            P+ +T N+L+  + K G  +EA+R + +  E+              +N     W++ V 
Sbjct: 654 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVK 713

Query: 585 L 585
           L
Sbjct: 714 L 714



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 4/366 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +N  +  +  TYN+ + +LC+ G  D  + +   M +    P+       +   I+ GK 
Sbjct: 372 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKF 427

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  L    R G++  S   YN+L++ L +  N + A  + +E       PD  T+  L
Sbjct: 428 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 487

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++G  + G +  A E + +M   G  PD   Y T   G  R+ +  +   L +E+     
Sbjct: 488 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 547

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +PD+  Y   I G CK+G + KA     ++   G+ P  VT+  +I G+ + G    A 
Sbjct: 548 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 607

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + ML     P V+T+  LI G+ + G+L Q  +   EMK + + PNV T   L+  +
Sbjct: 608 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 667

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK   +++A R+L +++   + P  + Y  +I   C     +E   +  EM +K  +PD 
Sbjct: 668 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 727

Query: 508 VTFTIL 513
            T   L
Sbjct: 728 YTHRAL 733



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 7/331 (2%)

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K++ A++ +  F++  R    P     NI+++ L     + KA   +  M   G  P +
Sbjct: 216 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 275

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +T+NT++    +  ++ R  ++  E+K ++ EFS   VTY  +I+G+ K GKM++A   +
Sbjct: 276 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE--VTYNILINGFSKNGKMEEARRFH 333

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            +M   G   +  +FN LI+G+ K G    A  + + ML+ G  P   T++  I   C  
Sbjct: 334 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 393

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G+++   +L   M     +P+V ++  L++   K  +  +A      L+  D+ P    Y
Sbjct: 394 GRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 449

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +IDG C++GN++ A  +  EM  +   PD +T+T L+ G    G +  A  ++++MLR
Sbjct: 450 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 509

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G  PD     +     L+ G  ++AFR+ +
Sbjct: 510 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 540



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 139/330 (42%), Gaps = 37/330 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN +M    +MG      ++FD +R+    P+       +     +G  + A+ L  + 
Sbjct: 413 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 472

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +L+   VK  N   A  ++ E  R   +PD + +     G  R+G+ 
Sbjct: 473 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 532

Query: 278 KKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            KAF    +M  +   +PD+  YN  I GLC+V  + +  E  +++ F+    PD VTYT
Sbjct: 533 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI-FRVGLVPDHVTYT 591

Query: 337 SVISGY-----------------------------------CKLGKMDKATGIYNEMNSC 361
           +VI GY                                    K G++++A     EM   
Sbjct: 592 TVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 651

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G++P+ +T N L+ G  K GN+  A     +M   G  P+  +++ LI   C   +  + 
Sbjct: 652 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 711

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +KL  EM  K + P+ YT   L   L K++
Sbjct: 712 VKLYKEMLDKEIEPDGYTHRALFKHLEKDH 741



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 4/220 (1%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           Y K    +K    + +M   G  PS    N+++        M  A  + E M+  G +P 
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V+TF++++D   + G L +  K+  EMK +N+  +  T+ ILIN   K  ++ +ARRF  
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            ++ +     P+ +NP+I+G+CK G  D+A  +  EM      P   T+ I I   C  G
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 394

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           R+ +A  + + M     APD ++ N+L+   +K G   EA
Sbjct: 395 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEA 430



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%)

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y +     + L   ++M  K   P+V    I++  L     +N A    + +  + ++P 
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +N ++D   KAG+++  + I  EM+ +  +  +VT+ ILI G    G+M EA     
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            M R G A    + N LI    K G+ ++A+ +
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGV 367


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 193/373 (51%), Gaps = 13/373 (3%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY +++R+ C  G L  ++ ++ +  +  G  P   M  FFV +  ++GK   A  ++  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            + G        +N+L+  L K    DEA  +  E  R     +  T+N LI GLS  G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M +   +PD  TYN +I G C+  E+ R +  L+E+K ++  SPD  TY+
Sbjct: 140 SGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 337 SVISGYCKLGKMDKATGIYNEM----NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            +I+G CK   + KA  +  EM    + C    S V FN L+DG+ K  ++  A  +   
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCA---SVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML  G  PDVVT+S++IDG CR G +++G  L ++M  +   P+V T+T+L+  LCK  +
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           + +A R +K++  +   P    Y+ V DG CK   +D AN ++  + +K    D V F  
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFET 373

Query: 513 LIIGHCMKGRMVE 525
           L++   +K R+++
Sbjct: 374 LLLS--VKKRLLD 384



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 176/315 (55%), Gaps = 7/315 (2%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHEL 318
           D +T+ +L++     GE++ A +   +M    G +P    YN  +  LC+  +V    E+
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +K +K      PDVVT+ ++I+G CK G++D+A  + +EM   G   + VT+N LI+G  
Sbjct: 77  VKNMK-DGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNV 437
             G    A  + + M +    PD  T++++I G+C++G++++     +EMK +   SP+ 
Sbjct: 136 SAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192

Query: 438 YTFTILINALCKENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           +T++ILIN LCK + L  A   L+++    D       +N ++DG+CKA ++D A  +++
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M E  C PD VT++ +I G C  G + +  ++  KM+  GC PD +T   L++ L K G
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312

Query: 557 MPNEAFRIMQRASED 571
              EA R+++R  ED
Sbjct: 313 KMVEACRLVKRMLED 327



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 164/301 (54%), Gaps = 12/301 (3%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P    +N  +  L + G+V +A E   +M    C PD+VT+NTLI+GLC+   +    ++
Sbjct: 52  PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E++ +S F+ ++VTY ++I+G    G+  +A  +   M +    P   T+N +I GF 
Sbjct: 112 LDEME-RSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFC 167

Query: 379 KVGNMVSA----EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG-KNL 433
           K G +  A    E M++R    G  PD  T+S LI+G C++  L +  +L  EM G K+ 
Sbjct: 168 KSGEIDRAYGFLEEMKQRA---GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDC 224

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
             +V  F  L++  CK   L+ AR  L  +  +   P    Y+ +IDG C+ G+VD+   
Sbjct: 225 CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFA 284

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ +M  + CKPD VT+T+L+ G C  G+MVEA  +  +ML  GC P+ +T + +   L 
Sbjct: 285 LLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC 344

Query: 554 K 554
           K
Sbjct: 345 K 345



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 185/364 (50%), Gaps = 9/364 (2%)

Query: 204 AGKCDAAKGLLSQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           AG+  AA  LL +   +PG     + MYN  ++AL K     EA+ + K       +PD 
Sbjct: 31  AGELQAAMDLLREMEQQPGMAPTPS-MYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDV 89

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TFN LI GL + G + +A +   +M   G + ++VTYNTLI+GL   +   R  E +  
Sbjct: 90  VTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL---SSAGRSGEAVLV 146

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS-CGIKPSAVTFNVLIDGFGKV 380
           ++  +  +PD  TY ++I G+CK G++D+A G   EM    G  P   T+++LI+G  K 
Sbjct: 147 MQGMTT-TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKS 205

Query: 381 GNMVSAEYMRERMLSF-GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            N+  A+ + + M+        VV F++L+DGYC+   L++  +L   M     +P+V T
Sbjct: 206 SNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVT 265

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ +I+ LC+   ++     L+++      P    Y  ++ G CKAG + EA  +V  M 
Sbjct: 266 YSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRML 325

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E  C P+ VT++++  G C   ++  A  +   +   G   D +   +L+  + K  +  
Sbjct: 326 EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLDR 385

Query: 560 EAFR 563
            AF+
Sbjct: 386 AAFQ 389



 Score = 42.4 bits (98), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 54/149 (36%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N ++   C+    D  + +   M   G  P+       +    R G  D    LL
Sbjct: 227 SVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALL 286

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +            Y  L+  L K     EA  + K        P+  T++++  GL +I
Sbjct: 287 EKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKI 346

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            ++  A +    +   G   D+V + TL+
Sbjct: 347 DKLDMANDLLTSIRDKGRVTDVVAFETLL 375


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 209/426 (49%), Gaps = 1/426 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L  S +T N V+     MGL +  + +F  M   G  P+    +  V +C   G+  
Sbjct: 182 NQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVL 241

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A+  L+        +       +++A  ++   +  V  F +   +   P+   F  LI
Sbjct: 242 EAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALI 301

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G +K+AFE   +M   G  P++ T+ TLI GLC+     +   L  ++     +
Sbjct: 302 NGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY 361

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+V TYT++I+GYCK  K+++A  + + M   G+ P+  T+  LIDG  KVGN V A  
Sbjct: 362 KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE 421

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G+ P++ T++++IDG C+ G L++  +L +++    L  +  T+TIL++  C
Sbjct: 422 LMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHC 481

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           ++   N +  F  ++      P    Y  +I  FC+   + E+  +  E       P K 
Sbjct: 482 RQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKK 541

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+T +I G+C  G    A+ +F +M   GCAPD IT  +LIS L K    ++A R +  A
Sbjct: 542 TYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA-RNLYDA 600

Query: 569 SEDQNL 574
             D+ L
Sbjct: 601 MMDKGL 606



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 206/416 (49%), Gaps = 2/416 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++ L++ + C MG     +   + M   G + ++      + +  + G  +   G   + 
Sbjct: 226 SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   + +L+N L KQ +  +A  + +E  R   +P+ +T   LI GL + G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 278 KKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +KAF  F  +  S G  P++ TY  +I+G C+ +++ R   LL  ++ +    P+  TYT
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ-EQGLVPNTNTYT 404

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+CK+G   +A  + + M   G  P+  T+N +IDG  K G++  A  +  ++   
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   D VT++ L+  +CR    N+ L   ++M     +P+++++T LI+  C++ ++ ++
Sbjct: 465 GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKES 524

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R  ++     L+P    Y  +I G+C+ GN   A  +   M    C PD +T+  LI G
Sbjct: 525 ERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            C + ++ +A ++++ M+  G +P ++T  +L     K    + A  ++ R  + Q
Sbjct: 585 LCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 171/361 (47%), Gaps = 37/361 (10%)

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           EAV M  E         T T N ++     +G V+ A   F +M   G SPD V++  ++
Sbjct: 172 EAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMV 231

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
              C +  V    + L  +  +  F  D  T T +I  +C+ G +++  G + +M   G+
Sbjct: 232 VACCNMGRVLEAEKWLNAM-VERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGL 290

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ + F  LI+G  K G++  A  + E M+  G+ P+V T ++LIDG C+ G   +  +
Sbjct: 291 APNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFR 350

Query: 424 LCDEM-KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP---------- 472
           L  ++ +     PNV+T+T +IN  CKE++LN A   L +++   LVP            
Sbjct: 351 LFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGH 410

Query: 473 -------------------------FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
                                    + YN +IDG CK G++DEA  ++ ++     + D 
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+TIL+  HC +     ++  FNKML++G  PD  +  +LIS   +     E+ R+ + 
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEE 530

Query: 568 A 568
           A
Sbjct: 531 A 531



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 153/347 (44%), Gaps = 8/347 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+    +  +++   M+  G +PN+      +    + G    A  L+   
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + + + YN++++ L K+ + DEA  +  +      Q D  T+ IL+    R  + 
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++  FF  M   G +PDI +Y TLIS  CR  ++     L +E        P   TYTS
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEA-VSLGLIPTKKTYTS 545

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+ G    A  ++  M++ G  P ++T+  LI G  K   +  A  + + M+  G
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT  +L   YC+    +  + + D ++ +     + T   L+  LC E +L+ A 
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAA 662

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
            F  +L    L  +P +    + GF           +V+E+ E+ C+
Sbjct: 663 LFFHKL----LDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICE 705



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 1/227 (0%)

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           GK+ +A  +  EM + G+  S  T N ++D    +G +  AE M   M   G  PD V+F
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
             ++   C  G++ +  K  + M  +    +  T T++I+A C++  +N    +  ++  
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L P    +  +I+G CK G++ +A  ++ EM  +  KP+  T T LI G C KG   +
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 526 AISIFNKMLRI-GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           A  +F K++R  G  P+  T  ++I+   K    N A  ++ R  E 
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 57/129 (44%)

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           KNL         ++    +  +L +A   + +++   LV      N V+D     G V+ 
Sbjct: 148 KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEI 207

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +  EM ++   PD V+F ++++  C  GR++EA    N M+  G   D+ T   +I 
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIID 267

Query: 551 CLLKGGMPN 559
              + G  N
Sbjct: 268 AFCQKGYVN 276


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 201/433 (46%), Gaps = 3/433 (0%)

Query: 140 LKFLEFSRVNLSLNHSFK--TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
            K L+F +  L+  + F   TY  ++  L + G   +   +   M      PN  M    
Sbjct: 142 FKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSAL 201

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +    + G    A GL SQ     + +    YNSL++         E   +  +  R   
Sbjct: 202 IDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENV 261

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            PD +TFNILI  L + G + +A      M   G  PDIVTYN L+ G C    V    E
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L   +  K    PDV+ Y  +I GYCK   +D+A  ++ E+ +  + P+  ++N LIDG 
Sbjct: 322 LFNRM-VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
              G +   + + + M      PDVVT++ LID  C+ G++ + L +   M  K + PN+
Sbjct: 381 CNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNI 440

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  +++  C  N +N A+    ++  + L P    YN +I+G+CK   VDEA V+  E
Sbjct: 441 VTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE 500

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K   PD  ++  LI G C  GR+     + ++M   G +PD IT N L+    K   
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560

Query: 558 PNEAFRIMQRASE 570
            ++A  + ++  E
Sbjct: 561 FDKAISLFRQIVE 573



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 196/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C  G+          + + G+L +       ++   + G+  AA  LL + 
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  MY++L++ L K     +A+ +  +        D  T+N LI G   +G  
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++  +    M      PD  T+N LI  LC+   +     +L  +  + E  PD+VTY +
Sbjct: 247 QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNA 305

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC    + +A  ++N M   G++P  + +NVLIDG+ K   +  A  + + + +  
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P + +++SLIDG C +G+++   KL DEM G    P+V T+ ILI+ALCKE R+ +A 
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    + P    YN ++DG+C   NV+ A  I   M +   +PD + + +LI G+
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C    + EAI +F +M      PD  + NSLI  L   G
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 205/444 (46%), Gaps = 35/444 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C +G    V  +   M  +   P+       + +  + G+   A+G+L+  
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN+L+     + N  EA  +F    +   +PD   +N+LI G  +   V
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F ++ +    P I +YN+LI GLC    ++   +LL E+   ++  PDVVTY  
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ-PPDVVTYNI 410

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G++ +A G+   M   G+KP+ VT+N ++DG+    N+  A+ +  RM+  G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++ ++ LI+GYC+   +++ + L  EM+ KNL P++ ++  LI+ LC   R+   +
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE----------------- 500
             L ++  +   P    YN ++D FCK    D+A  +  ++ E                 
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLC 590

Query: 501 -----------------KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
                              C P+  T+TILI   C  G   EA+ + +KM      PD I
Sbjct: 591 KGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650

Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
           T   +I  LL+    ++A ++ + 
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREE 674



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 190/396 (47%), Gaps = 36/396 (9%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P + + +  + + +R G    A  L +Q +   ++ S   +  L+N    Q++   A  +
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                +   QP+  TFN +I G    G + KA +F  ++ + G   D  TY TLI+GL +
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 309 VNEVARGHELLKEVKFKSEFSP-----------------------------------DVV 333
             ++     LL+E++ KS   P                                   D V
Sbjct: 173 NGQIKAALHLLQEME-KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S+I G C +G+  + T +  +M    + P   TFN+LID   K G ++ A+ +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  PD+VT+++L++GYC    +++  +L + M  + L P+V  + +LI+  CK   +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A    K+L   +LVP    YN +IDG C +G +     ++ EM      PD VT+ IL
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           I   C +GR++EA+ +   M++ G  P+ +T N+++
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 169/327 (51%), Gaps = 1/327 (0%)

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           N D+AV  F    R++  P T  F+ L+  + R+G    A   F  + S G SP I T+ 
Sbjct: 35  NVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI+     +  A    LL  +  KS + P++VT+ ++I+G+C  G + KA      + +
Sbjct: 95  ILINCYFHQSHTAFAFSLLATI-LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G      T+  LI+G  K G + +A ++ + M      P++V +S+LIDG C++G ++ 
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L LC ++  + +  +  T+  LI+  C   R  +  + L ++   ++ P  + +N +ID
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             CK G + EA  ++A M ++  KPD VT+  L+ G+C +  + EA  +FN+M++ G  P
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           D +  N LI    K  M +EA  + + 
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKE 360



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 156/340 (45%), Gaps = 2/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C+  + D   V+F  + +   +P        +     +G+    K LL +  
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                     YN L++AL K+    EA+ +     +   +P+  T+N ++ G      V 
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVN 457

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A + F  M   G  PDI+ YN LI+G C+   V     L KE++ K+   PD+ +Y S+
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN-LIPDIASYNSL 516

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G C LG++     + +EM   G  P  +T+N+L+D F K      A  +  +++  G 
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GI 575

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T  +++D  C+  +L         +     SPNV T+TILINALCK+    +A  
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            L +++ ND  P    +  +I    +    D+A  +  EM
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM 675



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 153/321 (47%), Gaps = 2/321 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N +L  +  +YN ++  LC  G    V+ + D M      P+       + +  + G+  
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A G+L       V  +   YN++++    +NN + A  +F    +   +PD   +N+LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  +   V +A   F +M      PDI +YN+LI GLC +  +    ELL E+   S  
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM-CDSGQ 541

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SPDV+TY  ++  +CK    DKA  ++ ++   GI P   T + ++D   K   +  AE 
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAED 600

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
             + +L  G  P+V T++ LI+  C++G   + + L  +M+  +  P+  TF I+I  L 
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLL 660

Query: 449 KENRLNDARRFLKQLKWNDLV 469
           + N  + A +  +++    LV
Sbjct: 661 QRNETDKAEKLREEMIARGLV 681



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 124/241 (51%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P    +  ++    ++G    A  ++ ++ S GI PS  TF +LI+ +    +   A  +
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              +L  GY P++VTF+++I+G+C NG + + L  C  +  +    + +T+  LIN L K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             ++  A   L++++ + + P   MY+ +IDG CK G V +A  + +++ E+    D VT
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  LI G C  GR  E   +  KM+R    PDD T N LI  L K G   EA  ++   S
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 570 E 570
           +
Sbjct: 293 K 293


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 214/426 (50%), Gaps = 10/426 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY + ++S C+     +   +   M   G   N+      V+    +G+ D A+ L  + 
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      +N L++ L K+    E+  +  +  +    P+ +TFNI +QGL R G +
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 278 KKAF---------EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            +A          E+   M + G  PD +TYN++I G C+   V   + +LK+  FK  F
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG-F 326

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD  TY S+I+G+CK G  D+A  ++ +    G++PS V +N LI G  + G ++ A  
Sbjct: 327 KPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQ 386

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M   G LP++ T++ +I+G C+ G ++    L D+   K   P+++T+  LI+  C
Sbjct: 387 LMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYC 446

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ +L+ A   + ++    + P    YN +++G CKAG  +E   I   MEEK C P+ +
Sbjct: 447 KQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+ I++   C   ++ EA+ +  +M   G  PD ++  +L +   K G  + A+++ +R 
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566

Query: 569 SEDQNL 574
            +  ++
Sbjct: 567 EKQYDV 572



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 209/441 (47%), Gaps = 58/441 (13%)

Query: 158 TYNLVMRSLCEMGLHDS------VQVVFDYMR---SDGHLPNSPMIEFFVSSCIRAGKCD 208
           T+N+ ++ LC  G  D       V    +Y+R   + G  P+       +    + G   
Sbjct: 253 TFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQ 312

Query: 209 AAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            A  +L       F+P E     F Y SL+N   K  + D A+ +FK+      +P    
Sbjct: 313 DANRVLKDAVFKGFKPDE-----FTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVL 367

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N LI+GLS+ G +  A +   +M   GC P+I TYN +I+GLC++  V+    L+ +  
Sbjct: 368 YNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAI 427

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    PD+ TY ++I GYCK  K+D AT + N M S G+ P  +T+N L++G  K G  
Sbjct: 428 AKG-CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKS 486

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                + + M   G  P+++T++ ++D  C+  ++N+ + L  EMK K L P+V +F  L
Sbjct: 487 EEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTL 546

Query: 444 INALCKENRLNDARRFLKQLK-----------WNDLV----------------------- 469
               CK   ++ A +  ++++           +N +V                       
Sbjct: 547 FTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSG 606

Query: 470 --PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P  + Y  VIDGFCK GN+ +    + E  EKR  P   TF  ++   C+K ++ EA+
Sbjct: 607 CDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAV 666

Query: 528 SIFNKMLRIGCAPDDITVNSL 548
            I + ML+ G  P+  TVN++
Sbjct: 667 GIIHLMLQKGIVPE--TVNTI 685



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 219/500 (43%), Gaps = 56/500 (11%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           L P +   V+K   +P   L+    ++      H+  TY  +++ L   G  + ++ +  
Sbjct: 5   LLPKHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLS 64

Query: 181 YMRSDGHLPNSPMIEFFVSSCI----RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            MR +    N+ ++E      +    R GK   A     +        S   +N+++N L
Sbjct: 65  EMREN---VNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNIL 121

Query: 237 VKQNNADEAVYMFKEYFRLYS---QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           V+    ++A    K Y R+     Q D +T+ I I+   +      A     +M   GC 
Sbjct: 122 VEFGYHNQA---HKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCD 178

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKE------------------------VKFKSE-- 327
            + V Y T+++GL    E     EL  E                        + F+SE  
Sbjct: 179 SNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERL 238

Query: 328 --------FSPDVVTYTSVISGYCKLGKMDKAT---------GIYNEMNSCGIKPSAVTF 370
                     P++ T+   + G C+ G +D+A              +M + G +P  +T+
Sbjct: 239 LGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTY 298

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N +IDG+ K G +  A  + +  +  G+ PD  T+ SLI+G+C++G  ++ + +  +  G
Sbjct: 299 NSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLG 358

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           K L P++  +  LI  L ++  +  A + + ++  N  +P  + YN VI+G CK G V +
Sbjct: 359 KGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSD 418

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A+ +V +   K C PD  T+  LI G+C + ++  A  + N+M   G  PD IT N+L++
Sbjct: 419 ASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLN 478

Query: 551 CLLKGGMPNEAFRIMQRASE 570
            L K G   E   I +   E
Sbjct: 479 GLCKAGKSEEVMEIFKAMEE 498



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 163/325 (50%), Gaps = 8/325 (2%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            L  S   YN +++ L + GL      + + M  +G LPN       ++   + G    A
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNIL 267
             L+            F YN+L++   KQ   D A  M     R++SQ   PD  T+N L
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVN---RMWSQGMTPDVITYNTL 476

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G+ ++  E F  M   GC+P+I+TYN ++  LC+  +V    +LL E+K K  
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKG- 535

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             PDVV++ ++ +G+CK+G +D A  ++  M     +  +  T+N+++  F +  NM  A
Sbjct: 536 LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMA 595

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   M + G  PD  T+  +IDG+C+ G + QG K   E   K   P++ TF  ++N 
Sbjct: 596 MKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNC 655

Query: 447 LCKENRLNDARRFLKQLKWNDLVPK 471
           LC ++++++A   +  +    +VP+
Sbjct: 656 LCVKDKVHEAVGIIHLMLQKGIVPE 680


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 218/456 (47%), Gaps = 73/456 (16%)

Query: 189 PNSPMIEF--FVSSCIRAGKCD--AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           P S +IEF   + S +++       A  L  +     +T   F +N L+N        + 
Sbjct: 62  PTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNF 121

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  M  +  ++  +PDT TFN LI+GL   G+VK+A  F   + + G   D  +Y TLI+
Sbjct: 122 AFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLIN 181

Query: 305 GLCRVNEVARGHELLKEVKFK----------------------------------SEFSP 330
           GLC++ E     ++L+++  K                                   + SP
Sbjct: 182 GLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISP 241

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DVVT++++I G+C +G++++A G++ EM    I P   TFN+L+D   K GN+  A+ M 
Sbjct: 242 DVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNML 301

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             M+  G +P+VVT+SSL+DGYC   Q+N+   + + +     +PN +++  +IN  CK 
Sbjct: 302 VVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKI 361

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG------------------------ 486
             +++A      +++  + P    YN +IDG CK+G                        
Sbjct: 362 KMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTY 421

Query: 487 -----------NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
                      +VD+A  +V +++++  +PD  TF ILI G C  GR+  A  +F  +L 
Sbjct: 422 NCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLS 481

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G + +  T N +++ L K G+ +EA  ++ +  ++
Sbjct: 482 KGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDN 517



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 213/410 (51%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +++ LC  G         D++ + G   +       ++   + G+   A  +L + 
Sbjct: 140 TFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI 199

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V ++  MYN+++++L K     +A  ++ +       PD  TF+ LI G   +G++
Sbjct: 200 DGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQL 259

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++AF  F +M     +PD  T+N L+  LC+   + +G + +  V  K    P+VVTY+S
Sbjct: 260 EEAFGLFREMVLKNINPDYYTFNILVDALCKEGNL-KGAKNMLVVMMKEGVMPNVVTYSS 318

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC + +++KA  + N ++  G  P+A ++  +I+GF K+  +  A  +   M   G
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT++SLIDG C++G+++   +L DEM       N++T+  LI+ALCK + ++ A 
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +K++K   + P  + +N +I G CK G +  A  +  ++  K    +  T+ I++ G 
Sbjct: 439 ALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +G   EA ++ +KM   G  PD +T  +LI  L       +A ++++ 
Sbjct: 499 CKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLRE 548



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 153/312 (49%), Gaps = 1/312 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++   C +G  +    +F  M      P+       V +  + G    AK +L   
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y+SL++     N  ++A ++     ++ + P+  ++  +I G  +I  V
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F DM   G +PD VTYN+LI GLC+   ++   EL+ E+    +   ++ TY  
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQ-PANIFTYNC 423

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK   +D+A  +  ++   GI+P   TFN+LI G  KVG + +A+ + + +LS G
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y  +  T++ +++G C+ G  ++   L  +M    + P+  T+  LI AL  ++    A 
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAE 543

Query: 458 RFLKQLKWNDLV 469
           + L+++   D+V
Sbjct: 544 KLLREMIARDVV 555



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 4/312 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N  + T+N+++ +LC+ G     + +   M  +G +PN       +       + + A
Sbjct: 273 NINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKA 332

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K +L+         +   Y +++N   K    DEA+ +F +       PD  T+N LI G
Sbjct: 333 KHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDG 392

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +  A+E   +M   G   +I TYN LI  LC+ + V +   L+K++K      P
Sbjct: 393 LCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIK-DQGIQP 451

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+ T+  +I G CK+G++  A  ++ ++ S G   +A T+N++++G  K G    AE + 
Sbjct: 452 DMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALL 511

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            +M   G +PD VT+ +LI       +  +  KL  EM  +++   VY    L   L  E
Sbjct: 512 SKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV---VYALEGLEMVLHLE 568

Query: 451 NRLNDARRFLKQ 462
           +   D  +F K+
Sbjct: 569 SEAKDQEKFGKK 580


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 201/443 (45%), Gaps = 4/443 (0%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--- 188
           RL  P L  + L   R    +  S +  N V+ +L       S Q   D  RS   L   
Sbjct: 149 RLRLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALAR-SPSTSPQASLDVFRSLIALRLH 207

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       V +    G    A   LS  +   ++     YN+LL A  ++    EA  +
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                +    P   T+N L+   +R+G +K+A      M +FG  PD+ TYN L +GLC+
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             +V    +L  E++  S  SPDVVTY +++    K  +   A  +  EM   G+K S V
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T N+++ G  + G +  A    + M   G  PDV+T+++LID YC+   + +   L DEM
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
               L  + +T   L+  LCKE R  +A   L+       VP    Y  V+  + K    
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           + A  +  EM +++  P   T+  LI G C  G++ EAI   N++++ G  PDD T N +
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567

Query: 549 ISCLLKGGMPNEAFRIMQRASED 571
           I    K G   +AF+   +  E+
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLEN 590



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 210/447 (46%), Gaps = 37/447 (8%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S + L L+ +  T+NL++ + C  G           M+  G  P+       + +  R G
Sbjct: 200 SLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKG 259

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
               A+ LL++ +   +  +   YN+L++A  +     +A  + +       +PD WT+N
Sbjct: 260 MLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYN 319

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +L  GL + G+V +AF+   +M      SPD+VTYNTL+    +    +    LL+E++ 
Sbjct: 320 VLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRD 379

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K   S  +VT+  V+ G C+ G++++A G    M   G+ P  +T+N LID + K  N+ 
Sbjct: 380 KGVKS-SLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVA 438

Query: 385 SAEYMRERML-----------------------------------SFGYLPDVVTFSSLI 409
            A  + + M+                                     G++PD V++ +++
Sbjct: 439 KAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVM 498

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
             Y +  +    L L DEM  + L+P++YT+  LI  LC   +L +A   L +L    LV
Sbjct: 499 AAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLV 558

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +I  +CK G++++A     +M E   KPD VT   L+ G C+ G++ +AI +
Sbjct: 559 PDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKL 618

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGG 556
           F      G   D IT N+LI  L K G
Sbjct: 619 FESWAEKGKKVDVITYNTLIQALCKDG 645



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 201/471 (42%), Gaps = 77/471 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL----PNSPMIEFFVSSCIRAGKCDAAKGL 213
           TYN++   LC+ G  D    + D M    HL    P+       V +C +  +   A  L
Sbjct: 317 TYNVLAAGLCQAGKVDEAFKLKDEME---HLSIVSPDVVTYNTLVDACFKYQRSSDALNL 373

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L + R   V  S   +N ++  L ++   +EA+   K        PD  T+N LI    +
Sbjct: 374 LEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCK 433

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK----------EVK 323
              V KAF    +M   G   D  T NTL+  LC+        ELL+          EV 
Sbjct: 434 ARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVS 493

Query: 324 F------------------------KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           +                        K + +P + TY ++I G C +GK+ +A    NE+ 
Sbjct: 494 YGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM 553

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G+ P   T+N++I  + K G++  A     +ML   + PDVVT ++L++G C +G+L 
Sbjct: 554 KKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLE 613

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + +KL +    K    +V T+  LI ALCK+  ++ A  F   ++   L P  F YN V+
Sbjct: 614 KAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVL 673

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL-------------------------- 513
               +AG  +EA  ++ +++E     ++ ++ ++                          
Sbjct: 674 SALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAK 733

Query: 514 ----------IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
                     +   C+ G++ EA ++ ++M++ G + D  T  +L+  L+K
Sbjct: 734 GGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 144/331 (43%), Gaps = 37/331 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N ++ +LC+   ++  + +       G +P+       +++  +  K + A  L  + 
Sbjct: 458 TLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM 517

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++T S + YN+L+  L       EA+    E  +    PD  T+NI+I    + G++
Sbjct: 518 SKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDL 577

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KAF+F   M      PD+VT NTL++GLC   ++ +  +L +    K +   DV+TY +
Sbjct: 578 EKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK-KVDVITYNT 636

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G +D A   + +M + G++P A T+NV++    + G    A+ M  ++   G
Sbjct: 637 LIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696

Query: 398 YLP------------------------------------DVVTFSSLIDGYCRNGQLNQG 421
            L                                     D  +++  +   C  GQL + 
Sbjct: 697 KLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEA 756

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENR 452
             + DEM  K +S +  T+  L+  L K  +
Sbjct: 757 KAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 201/416 (48%), Gaps = 1/416 (0%)

Query: 149  NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
            NL + H+  TY++++   C          V   M   G+ PN   +   ++    + +  
Sbjct: 723  NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 782

Query: 209  AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
             A  L+ Q        +T  +N+L++ L   N A EA+ +         QPD  T+ +++
Sbjct: 783  EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 842

Query: 269  QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             GL + G+   AF     M      P ++ YNT+I GLC+   +     L KE++ K   
Sbjct: 843  NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG-I 901

Query: 329  SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             P+VVTY+S+IS  C  G+   A+ + ++M    I P   TF+ LID F K G +V AE 
Sbjct: 902  RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961

Query: 389  MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
            + + M+     P +VT+SSLI+G+C + +L++  ++ + M  K+  P+V T+  LI   C
Sbjct: 962  LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 1021

Query: 449  KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
            K  R+ +     +++    LV     YN +I G  +AG+ D A  I  EM      P+ +
Sbjct: 1022 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 1081

Query: 509  TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            T+  L+ G C  G++ +A+ +F  + R    P   T N +I  + K G   + + +
Sbjct: 1082 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 1137



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 188/345 (54%), Gaps = 6/345 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+      SL+N   ++N   +AV +  +   +  +PD   +N +I  L +   
Sbjct: 254 YEPDRVTIG-----SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 308

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  AF+FF ++   G  P++VTY  L++GLC  +  +    LL ++  K + +P+V+TY+
Sbjct: 309 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYS 367

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++  + K GK+ +A  ++ EM    I P  VT++ LI+G      +  A  M + M+S 
Sbjct: 368 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 427

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G L DVV++++LI+G+C+  ++  G+KL  EM  + L  N  T+  LI    +   ++ A
Sbjct: 428 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 487

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           + F  Q+ +  + P  + YN ++ G C  G +++A VI  +M+++    D VT+T +I G
Sbjct: 488 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 547

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C  G++ EA S+F  +   G  PD +T  +++S L   G+ +E 
Sbjct: 548 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 592



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 215/440 (48%), Gaps = 37/440 (8%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            T+N ++  L           + D M + G  P+       V+   + G  D A  LL++ 
Sbjct: 802  TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------YFRLYS-------- 257
              G++     +YN++++ L K  + D+A+ +FKE            Y  L S        
Sbjct: 862  EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921

Query: 258  ---------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                            PD +TF+ LI    + G++ +A + + +M      P IVTY++L
Sbjct: 922  SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981

Query: 303  ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
            I+G C  + +    ++ + +  K  F PDVVTY ++I G+CK  ++++   ++ EM+  G
Sbjct: 982  INGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040

Query: 363  IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +  + VT+N+LI G  + G+   A+ + + M+S G  P+++T+++L+DG C+NG+L + +
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100

Query: 423  KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
             + + ++   + P +YT+ I+I  +CK  ++ D       L    + P    YN +I GF
Sbjct: 1101 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 1160

Query: 483  CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            C+ G+ +EA+ +  EM+E    P+   +  LI      G    +  +  +M   G A D 
Sbjct: 1161 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 1220

Query: 543  ITVNSLISCLLKGGMPNEAF 562
             T+  L++ +L  G  +++F
Sbjct: 1221 STI-GLVTNMLHDGRLDKSF 1239



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 204/405 (50%), Gaps = 9/405 (2%)

Query: 166  LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVT 223
            L E+ L D+V +  + ++S    P   +IEF   +S+  +  K D    L  Q +   + 
Sbjct: 671  LSELKLDDAVALFGEMVKSR---PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727

Query: 224  MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
             + + Y+ L+N   +++    A+ +  +  +L  +P+  T + L+ G      + +A   
Sbjct: 728  HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787

Query: 284  FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
               M   G  P+ VT+NTLI GL   N+ +    L+  +  K    PD+VTY  V++G C
Sbjct: 788  VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLC 846

Query: 344  KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
            K G  D A  + N+M    ++P  + +N +IDG  K  +M  A  + + M + G  P+VV
Sbjct: 847  KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 906

Query: 404  TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            T+SSLI   C  G+ +   +L  +M  + ++P+V+TF+ LI+A  KE +L +A +   ++
Sbjct: 907  TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 966

Query: 464  KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                + P    Y+ +I+GFC    +DEA  +   M  K C PD VT+  LI G C   R+
Sbjct: 967  VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 1026

Query: 524  VEAISIFNKMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIM 565
             E + +F +M + G   + +T N LI  L + G   M  E F+ M
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 1071



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 200/401 (49%), Gaps = 6/401 (1%)

Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           L ++ L+D++ +  D ++S    P   +++F   +S+ ++  K D    L  +     + 
Sbjct: 164 LRDIKLNDAIDLFSDMVKSR---PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 220

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
              + +N ++N          A+ +  +  +L  +PD  T   L+ G  R   V  A   
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G  PDIV YN +I  LC+   V    +  KE++ K    P+VVTYT++++G C
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLC 339

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
              +   A  + ++M    I P+ +T++ L+D F K G ++ A+ + E M+     PD+V
Sbjct: 340 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 399

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+SSLI+G C + ++++  ++ D M  K    +V ++  LIN  CK  R+ D  +  +++
Sbjct: 400 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 459

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               LV     YN +I GF +AG+VD+A    ++M+     PD  T+ IL+ G C  G +
Sbjct: 460 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 519

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +A+ IF  M +     D +T  ++I  + K G   EA+ +
Sbjct: 520 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 560



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 190/397 (47%), Gaps = 1/397 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L + +   T+N+V+   C          +   M   G+ P+   I   V+   R  +   
Sbjct: 217 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 276

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  L+ +            YN+++++L K    ++A   FKE  R   +P+  T+  L+ 
Sbjct: 277 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 336

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL        A     DM     +P+++TY+ L+    +  +V    EL +E+  +    
Sbjct: 337 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSID 395

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD+VTY+S+I+G C   ++D+A  +++ M S G     V++N LI+GF K   +     +
Sbjct: 396 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 455

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G + + VT+++LI G+ + G +++  +   +M    +SP+++T+ IL+  LC 
Sbjct: 456 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 515

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L  A    + ++  ++      Y  VI G CK G V+EA  +   +  K  KPD VT
Sbjct: 516 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 575

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           +T ++ G C KG + E  +++ KM + G   +D T++
Sbjct: 576 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 612



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 211/475 (44%), Gaps = 53/475 (11%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V +S++    TY+ ++  LC     D    +FD M S G L +       ++   +A + 
Sbjct: 390 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 449

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +    L  +     +  +T  YN+L+    +  + D+A   F +       PD WT+NIL
Sbjct: 450 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL   GE++KA   F DM       DIVTY T+I G+C+  +V     L   +  K  
Sbjct: 510 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG- 568

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMN---------------------------S 360
             PD+VTYT+++SG C  G + +   +Y +M                            S
Sbjct: 569 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLS 628

Query: 361 CGIKPSAV----------TFNVLIDGFGKVG---------NMVSAEYMRERMLSFGYL-- 399
           CG  PS +            ++L    GK           N +S   + + +  FG +  
Sbjct: 629 CGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVK 688

Query: 400 ----PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               P ++ FS L+    +  + +  + L ++M+   +  N YT++ILIN  C+ ++L  
Sbjct: 689 SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPL 748

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L ++      P     + +++G+C +  + EA  +V +M     +P+ VTF  LI 
Sbjct: 749 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 808

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G  +  +  EA+++ ++M+  GC PD +T   +++ L K G  + AF ++ +  +
Sbjct: 809 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 863



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 196/449 (43%), Gaps = 53/449 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++ SLC+    +     F  +   G  PN       V+    + +   A  LLS  
Sbjct: 295 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 354

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++T +   Y++LL+A VK     EA  +F+E  R+   PD  T++ LI GL     +
Sbjct: 355 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 414

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M S GC  D+V+YNTLI+G C+   V  G +L +E+  +   S + VTY +
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNT 473

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ + G +DKA   +++M+  GI P   T+N+L+ G    G +  A  + E M    
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+VT++++I G C+ G++ +   L   +  K L P++ T+T +++ LC +  L++  
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593

Query: 458 RFLKQLKWNDLVPK-------------------------PFMYNPVIDGFCKAG------ 486
               ++K   L+                           P +   +  G CK        
Sbjct: 594 ALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRA 653

Query: 487 ---------------------NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
                                 +D+A  +  EM + R  P  + F+ L+       +   
Sbjct: 654 FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV 713

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLK 554
            IS+  +M  +G   +  T + LI+C  +
Sbjct: 714 VISLGEQMQNLGIPHNHYTYSILINCFCR 742



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 3/301 (0%)

Query: 272 SRIGEVK--KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           +R+ ++K   A + F DM      P IV +N L+S + ++ +      L K+++      
Sbjct: 162 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG-IR 220

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            D+ T+  VI+ +C   ++  A  I  +M   G +P  VT   L++GF +   +  A  +
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M+  GY PD+V ++++ID  C+  ++N       E++ K + PNV T+T L+N LC 
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 340

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +R +DA R L  +    + P    Y+ ++D F K G V EA  +  EM      PD VT
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           ++ LI G C+  R+ EA  +F+ M+  GC  D ++ N+LI+   K     +  ++ +  S
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 570 E 570
           +
Sbjct: 461 Q 461



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 195/460 (42%), Gaps = 51/460 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++   C+    +    +F  M   G + N+      +    +AG  D A+   SQ 
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++   + YN LL  L      ++A+ +F++  +     D  T+  +I+G+ + G+V
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 554

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKE---VKFKSEFSPD 331
           ++A+  F  +   G  PDIVTY T++SGLC    ++EV   +  +K+   +K     S  
Sbjct: 555 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDG 614

Query: 332 VVTYTS------------------VISGYCKLG--------------------------- 346
            +T ++                  + SG CK                             
Sbjct: 615 DITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSEL 674

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+D A  ++ EM      PS + F+ L+    K+        + E+M + G   +  T+S
Sbjct: 675 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LI+ +CR  QL   L +  +M      PN+ T + L+N  C   R+++A   + Q+   
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    +N +I G        EA  ++  M  K C+PD VT+ +++ G C +G    A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            ++ NKM +    P  +  N++I  L K    ++A  + +
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 894


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 228/469 (48%), Gaps = 11/469 (2%)

Query: 128 EVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           +VI R+ +P    +  +++       H+  T N ++    +    +   + F     +  
Sbjct: 74  KVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVF 133

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
            P+       ++   +AG    A  L  + +   + +    +N +L  L        A  
Sbjct: 134 EPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLR-SHNIVLRGLCSGGKISMAWE 192

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +FK+   ++S P+  ++ I+I GL +  +V KA   F  M      PD+VTY  LI GL 
Sbjct: 193 VFKDMSGIFS-PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLG 251

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPS 366
           +   V   ++L +E + K    P VVTY ++I G CK G+++ A  +Y++M     +KP 
Sbjct: 252 KQRRVKEAYDLFEEARAKG-CHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPD 310

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T++ LI+G         A  + E ML  G  PDVVT+++L+DG C++G  ++ +++  
Sbjct: 311 MFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFR 370

Query: 427 EMKGKNL-SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           +M   N+  PNV T+T+LI+  CK +RL DA +  K+++   L+P    +  VI   CK 
Sbjct: 371 KMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKE 430

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
             +DEA+ +   +  K CKPD V F  ++ G+C   R+ +A  + ++ML  GCAP   T 
Sbjct: 431 SRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATY 489

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL--RTNTDIP 592
            +L++   + G  ++A  +     E   +  P  +    L  RT TD P
Sbjct: 490 TALVTGFCRTGRYSDALIMYHEMIE---MGFPPERHLAELVDRTRTDHP 535



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 34/313 (10%)

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           S G   DI+  + +   + R+ +     E+ +    +S+F+ +  T  +++S Y K  ++
Sbjct: 59  SLGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRV 118

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG----------- 397
           + A   +        +P  V++N L++GF K G++  A  +   M   G           
Sbjct: 119 EDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVL 178

Query: 398 ----------------------YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
                                 + P++++++ +IDG C++ ++++ + L  +M  K + P
Sbjct: 179 RGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYP 238

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +V T+  LI+ L K+ R+ +A    ++ +     P    YN +IDG CK G ++ A  + 
Sbjct: 239 DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLY 298

Query: 496 AEM-EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            +M  E   KPD  T++ LI G  +  R  +A  ++ +ML  GC+PD +T N+L+  L K
Sbjct: 299 DDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCK 358

Query: 555 GGMPNEAFRIMQR 567
            G  ++A  I ++
Sbjct: 359 SGCEDKAMEIFRK 371


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 206/415 (49%), Gaps = 11/415 (2%)

Query: 158 TYNLVMRSLCEMG-----LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           T N +M+ LC  G     LH   +VV    + D H+    ++    +   + G+   A  
Sbjct: 82  TLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMD-HVSYGTLL----NGLCKIGETRCAVK 136

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL          +  MYN++++ L K    +EA  ++ E       PD  T+  LI G  
Sbjct: 137 LLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFC 196

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            +G++  AF    +M     +P +  YN LI+ LC+   V     LL  V  K    P V
Sbjct: 197 LLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL-AVMTKEGIKPGV 255

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY++++ GYC +G++  A  I++ M   G+ P+  ++N++I+G  K   +  A  +   
Sbjct: 256 VTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 315

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML    +PD VT++SLIDG C++G++   L L +EM  +    +V T+T L++ALCK   
Sbjct: 316 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN 375

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L+ A     ++K   + P  + Y  +IDG CK G +  A  +   +  K C  D  T+T+
Sbjct: 376 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 435

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +I G C +G   EA++I +KM   GC P+ +T   +I  L +    ++A +++  
Sbjct: 436 MISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHE 490



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 195/390 (50%), Gaps = 41/390 (10%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           ++P  +T++T M    L   VK+     +++   +      Q D  ++  L+ GL +IGE
Sbjct: 76  YQPDTITLNTLMKGLCLKGEVKK-----SLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGE 130

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A +    +      P++V YNT+I GLC+   V   ++L  E+  +  F PD +TYT
Sbjct: 131 TRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF-PDAITYT 189

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+C LG++  A  + +EM    I P    +N+LI+   K GN+  A+ +   M   
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P VVT+S+L+DGYC  G++    ++   M    ++PNVY++ I+IN LCK  R+++A
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 309

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAG------------------------------ 486
              L+++   ++VP    YN +IDG CK+G                              
Sbjct: 310 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 369

Query: 487 -----NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
                N+D+A  +  +M+E+  +P   T+T LI G C  GR+  A  +F  +L  GC  D
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCID 429

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASED 571
             T   +IS L K GM +EA  I  +  ++
Sbjct: 430 VWTYTVMISGLCKEGMFDEALAIKSKMEDN 459



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 127/243 (52%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P ++ +  ++    K+ +   A  +  +M   GI+ + VT N+LI+ F  +G M  +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  ++L  GY PD +T ++L+ G C  G++ + L   D++  +    +  ++  L+N LC
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K      A + L+ ++     P   MYN +IDG CK   V+EA  + +EM+ +   PD +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+T LI G C+ G+++ A S+ ++M+     P     N LI+ L K G   EA  ++   
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 569 SED 571
           +++
Sbjct: 247 TKE 249



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 1/283 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N     YN+++ +LC+ G     + +   M  +G  P        +      G+   A
Sbjct: 215 NINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNA 274

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K +        V  + + YN ++N L K    DEA+ + +E       PDT T+N LI G
Sbjct: 275 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 334

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +  A     +M   G   D+VTY +L+  LC+   + +   L  ++K +    P
Sbjct: 335 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG-IQP 393

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            + TYT++I G CK G++  A  ++  +   G      T+ V+I G  K G    A  ++
Sbjct: 394 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIK 453

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +M   G +P+ VTF  +I       + ++  KL  EM  K L
Sbjct: 454 SKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 40/288 (13%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           + V + +N +  +YN+++  LC+    D    +   M     +P++      +    ++G
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           +  +A  L+++            Y SLL+AL K  N D+A  +F +      QP  +T+ 
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI GL + G +K A E F  +   GC  D+ TY  +ISGL                   
Sbjct: 400 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL------------------- 440

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
                            CK G  D+A  I ++M   G  P+AVTF ++I    +      
Sbjct: 441 -----------------CKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK 483

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           AE +   M++ G L  V+ F  + D + +N + ++  KL  EM  K L
Sbjct: 484 AEKLLHEMIAKGLL--VLDF-KVADVFVQN-ENDKAEKLLHEMIAKGL 527



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P +  F  ++ +L K  +   A    KQ++   +       N +I+ FC  G +  +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ ++ +   +PD +T   L+ G C+KG + +++   +K++  G   D ++  +L++ L 
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 554 KGGMPNEAFRIMQRASEDQN 573
           K G    A +++ R  ED++
Sbjct: 127 KIGETRCAVKLL-RMIEDRS 145


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 193/373 (51%), Gaps = 13/373 (3%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY +++R+ C  G L  ++ ++ +  +  G  P   M  FFV +  ++GK   A  ++  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            + G        +N+L+  L K    DEA  +  E  R     +  T+N LI GLS  G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M +   +PD  TYN +I G C+  E+ R +  L+E+K ++  SPD  TY+
Sbjct: 140 SGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 337 SVISGYCKLGKMDKATGIYNEM----NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            +I+G CK   + KA  +  EM    + C    S V FN L+DG+ K  ++  A  +   
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCA---SVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML  G  PDVVT+S++IDG CR G +++G  L ++M  +   P+V T+T+L+  LCK  +
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           + +A R +K++  +   P    Y+ V DG CK   +D AN ++  + +K    D V F  
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEA 373

Query: 513 LIIGHCMKGRMVE 525
           L++   +K R+++
Sbjct: 374 LLLS--VKKRLLD 384



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 176/315 (55%), Gaps = 7/315 (2%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHEL 318
           D +T+ +L++     GE++ A +   +M    G +P    YN  +  LC+  +V    E+
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +K +K      PDVVT+ ++I+G CK G++D+A  + +EM   G   + VT+N LI+G  
Sbjct: 77  VKNMK-DGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNV 437
             G    A  + + M +    PD  T++++I G+C++G++++     +EMK +   SP+ 
Sbjct: 136 SAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192

Query: 438 YTFTILINALCKENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           +T++ILIN LCK + L  A   L+++    D       +N ++DG+CKA ++D A  +++
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M E  C PD VT++ +I G C  G + +  ++  KM+  GC PD +T   L++ L K G
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312

Query: 557 MPNEAFRIMQRASED 571
              EA R+++R  ED
Sbjct: 313 KMVEACRLVKRMLED 327



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 164/301 (54%), Gaps = 12/301 (3%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P    +N  +  L + G+V +A E   +M    C PD+VT+NTLI+GLC+   +    ++
Sbjct: 52  PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E++ +S F+ ++VTY ++I+G    G+  +A  +   M +    P   T+N +I GF 
Sbjct: 112 LDEME-RSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFC 167

Query: 379 KVGNMVSA----EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG-KNL 433
           K G +  A    E M++R    G  PD  T+S LI+G C++  L +  +L  EM G K+ 
Sbjct: 168 KSGEIDRAYGFLEEMKQRA---GCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDC 224

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
             +V  F  L++  CK   L+ AR  L  +  +   P    Y+ +IDG C+ G+VD+   
Sbjct: 225 CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFA 284

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ +M  + CKPD VT+T+L+ G C  G+MVEA  +  +ML  GC P+ +T + +   L 
Sbjct: 285 LLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC 344

Query: 554 K 554
           K
Sbjct: 345 K 345



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 185/364 (50%), Gaps = 9/364 (2%)

Query: 204 AGKCDAAKGLLSQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           AG+  AA  LL +   +PG     + MYN  ++AL K     EA+ + K       +PD 
Sbjct: 31  AGELQAAMDLLREMEQQPGMAPTPS-MYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDV 89

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TFN LI GL + G + +A +   +M   G + ++VTYNTLI+GL   +   R  E +  
Sbjct: 90  VTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL---SSAGRSGEAVLV 146

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS-CGIKPSAVTFNVLIDGFGKV 380
           ++  +  +PD  TY ++I G+CK G++D+A G   EM    G  P   T+++LI+G  K 
Sbjct: 147 MQGMTT-TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKS 205

Query: 381 GNMVSAEYMRERMLSF-GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            N+  A+ + + M+        VV F++L+DGYC+   L++  +L   M     +P+V T
Sbjct: 206 SNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVT 265

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ +I+ LC+   ++     L+++      P    Y  ++ G CKAG + EA  +V  M 
Sbjct: 266 YSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRML 325

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E  C P+ VT++++  G C   ++  A  +   +   G   D +   +L+  + K  +  
Sbjct: 326 EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRLLDR 385

Query: 560 EAFR 563
            AF+
Sbjct: 386 AAFQ 389


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 192/369 (52%), Gaps = 6/369 (1%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL-YSQPDTW 262
           A   DAA  LL +     +  +    + +L  L +     +A+  F     L ++QPD  
Sbjct: 38  ASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVV 97

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           ++  LI GL ++G V  AF+ F  M  + GC P+  TYN L+ GLC+ + +     ++ E
Sbjct: 98  SYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITE 157

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
            + K +F+PDVVTY ++++   +LG++D+A   + +M   G  P+ V+FN +I G  +  
Sbjct: 158 AR-KRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR 216

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +   M+   + P++VT+S +IDG C++ QL++  +L D M  +   P++  +T
Sbjct: 217 RLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYT 276

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+       RL+ A   L+++     +P    Y  VID  CK G VD+A+ I  E+   
Sbjct: 277 PLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 336

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +C P+ VT++ LI G+C   R+ E   +  +M    C P+ +T N++I  L       EA
Sbjct: 337 KCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEA 393

Query: 562 FRIMQRASE 570
           + + +  SE
Sbjct: 394 YGMFREMSE 402



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 196/366 (53%), Gaps = 2/366 (0%)

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           +RAG  + A  L  +  P ++  S+  YN L+      ++ D A  + +E      Q + 
Sbjct: 2   VRAGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCND 60

Query: 262 WTFNILIQGLSRIGEVKKAFEFF-YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            T +I++QGL R G V +A E F   +      PD+V+Y TLI+GLC++  V    +L +
Sbjct: 61  RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 120

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           ++       P+  TY +++ G CK  ++D A  +  E       P  VT+N L+    ++
Sbjct: 121 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQL 180

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A     +M   GY+P +V+F+++I G CR  +L   L++ +EM  ++  PN+ T+
Sbjct: 181 GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTY 240

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           +++I+ LCK ++L++A++ L ++      P    Y P++ GF  AG +D A  ++  M  
Sbjct: 241 SVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVS 300

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           + C PD VT+T++I   C  GR+ +A  IF +++   C+P+ +T ++LI    +    +E
Sbjct: 301 QGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDE 360

Query: 561 AFRIMQ 566
             ++M+
Sbjct: 361 GGKVMR 366



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 168/339 (49%), Gaps = 8/339 (2%)

Query: 141 KFLEFSRVNLSLNHS---FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEF 196
           + LE    +L L H+     +Y  ++  LC++G  D+   +F  M + G   PN+     
Sbjct: 78  QALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 137

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            V    +  + DAA+ ++++ R  +       YN+L+ AL +    DEA+  F +     
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             P   +FN +I GL R   +  A E F +M      P++VTY+ +I GLC+ +++    
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ 257

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +LL  +       PD+V YT ++ G+   G++D A G+   M S G  P  VT+ V+ID 
Sbjct: 258 QLLDRM-VSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 316

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             KVG +  A  +   +++    P+VVT+S+LI GYCR  ++++G K+  EM  +   PN
Sbjct: 317 LCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PN 373

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           V T+  +I  L   +R  +A    +++     VP    Y
Sbjct: 374 VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 14/256 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN +M +L ++G  D     F  M  +G++P        ++   RA +   A  + ++ 
Sbjct: 169 TYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM 228

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P  VT     Y+ +++ L K +  DEA  +         +PD   +  L+ G S
Sbjct: 229 IDRDFHPNLVT-----YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS 283

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
             G +  A      M S GC PD+VTY  +I  LC+V  V   HE+ +E+   ++ SP+V
Sbjct: 284 AAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL-VANKCSPNV 342

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY+++I GYC+  ++D+   +  EM     +P+ VT+N +I G   V     A  M   
Sbjct: 343 VTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFRE 399

Query: 393 MLSFGYLPDVVTFSSL 408
           M   G++PD  T+  L
Sbjct: 400 MSECGFVPDARTYRGL 415



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 2/171 (1%)

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA-RRFLK 461
           VT++ LI G+C    L+    L  EM  + +  N  T +I++  LC+  R+  A   F  
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMK 520
            L+     P    Y  +I+G CK G VD A  +  +M     C+P+  T+  L+ G C +
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            R+  A ++  +  +   APD +T N+L++ L + G  +EA     + +E+
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEE 196



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 40/200 (20%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIR 203
           ++   + +  TY++V+  LC+    D  Q + D M S+G  P+    +P++  F +    
Sbjct: 229 IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA---- 284

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------ 251
           AG+ D+A GLL +            Y  +++ L K    D+A  +F+E            
Sbjct: 285 AGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVT 344

Query: 252 -------YFR-------------LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
                  Y R             +  +P+  T+N +I GLS +   ++A+  F +M   G
Sbjct: 345 YSALIGGYCRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG 404

Query: 292 CSPDIVTYNTLISGLCRVNE 311
             PD  TY  L   L  +++
Sbjct: 405 FVPDARTYRGLKRALRMIDQ 424


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 204/405 (50%), Gaps = 4/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++++LC+ G     + +FD M S    P+       +      G+ + A  LL + 
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEM 317

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G V  +  +Y S++  L  +    +A+ + ++  +     D   +  ++ G    G++
Sbjct: 318 VAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDL 377

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +F +M   G + D VTY T+I+GLCR  E+    +LL+E+ +      D VTYT 
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEM-WARRLDVDEVTYTV 436

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK GKM +A  ++N M   G+ P+ VT+  L DG  K G++ +A  +   M + G
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +  T++SLI+G C+ G L Q ++   +M    L P+VYT+T LI+ALCK   L+ A 
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    + P    YN +++GFC +G V+    ++  M EK   P+  T+  L+  +
Sbjct: 557 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQY 616

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C++  M     I+  M      P++ T N LI    K     EA 
Sbjct: 617 CIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEAL 661



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 188/380 (49%), Gaps = 3/380 (0%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           Y  V+  LC+ G + D+++VV D ++    L  +         C +     A +      
Sbjct: 329 YTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQ 388

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G  T     Y +++N L +    +EA  + +E +      D  T+ +LI G  + G++
Sbjct: 389 RKGLAT-DGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKM 447

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+    M   G +P++VTY  L  GLC+  +V   +ELL E+  K     +  TY S
Sbjct: 448 AEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG-LELNACTYNS 506

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK G +++A     +M++  +KP   T+  LID   K G++  A  + + ML  G
Sbjct: 507 LINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG 566

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P +VT++ L++G+C +G++  G KL D M  KN+ PN  T+  L+   C EN +    
Sbjct: 567 IKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTT 626

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K ++  D+ P    YN +I G CKA N+ EA     EM +K  +    +++ LI   
Sbjct: 627 EIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLL 686

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             K + VEA  +F+ M + G
Sbjct: 687 NKKKKFVEARELFHDMRKEG 706



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 163/333 (48%), Gaps = 8/333 (2%)

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA++ +   DEA+ +F+E        +  ++NIL++ L   G VK A + F +M S   +
Sbjct: 236 NAVLSRLPLDEAIELFQEL----PHKNVCSYNILLKALCDAGRVKDARQLFDEMAS---A 288

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           PD+VTY  LI G C + E+    +LL E+       P+   YTSV++  C  G +  A  
Sbjct: 289 PDVVTYGILIHGHCALGELENAVKLLDEM-VAGGVEPNATVYTSVVALLCDKGWISDALR 347

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +  +M    +      +  ++ GF   G++VSA    + M   G   D VT++++I+G C
Sbjct: 348 VVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLC 407

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           R  +L +  KL  EM  + L  +  T+T+LI+  CK  ++ +A +    +    + P   
Sbjct: 408 RAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVV 467

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            Y  + DG CK G+V  AN ++ EM  K  + +  T+  LI G C  G + +A+     M
Sbjct: 468 TYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADM 527

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
                 PD  T  +LI  L K G  + A  ++Q
Sbjct: 528 DTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQ 560



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 148/287 (51%), Gaps = 13/287 (4%)

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
           +G SP     N ++S L     +    EL +E+  K     +V +Y  ++   C  G++ 
Sbjct: 226 YGISPSPEACNAVLSRL----PLDEAIELFQELPHK-----NVCSYNILLKALCDAGRVK 276

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  +++EM S    P  VT+ +LI G   +G + +A  + + M++ G  P+   ++S++
Sbjct: 277 DARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVV 333

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
              C  G ++  L++ ++M  + +  +   +T +++  C +  L  ARR+  +++   L 
Sbjct: 334 ALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLA 393

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                Y  +I+G C+A  ++EA  ++ EM  +R   D+VT+T+LI G+C +G+M EA  +
Sbjct: 394 TDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQM 453

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
            N M++ G  P+ +T  +L   L K G    A  ++   S ++ L+L
Sbjct: 454 HNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMS-NKGLEL 499



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 134/279 (48%), Gaps = 1/279 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           VT +   Y +L + L KQ +   A  +  E      + +  T+N LI GL + G +++A 
Sbjct: 462 VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAM 521

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               DM +    PD+ TY TLI  LC+  ++ R H LL+E+  K    P +VTY  +++G
Sbjct: 522 RTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG-IKPTIVTYNVLMNG 580

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +C  G+++    + + M    I P+A T+N L+  +    NM S   + + M S    P+
Sbjct: 581 FCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPN 640

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T++ LI G+C+   + + L   DEM  K       +++ LI  L K+ +  +AR    
Sbjct: 641 ENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFH 700

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            ++   L  +  +Y+  ID      N++    +  E+ E
Sbjct: 701 DMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVE 739


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 205/407 (50%), Gaps = 14/407 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K  N V+R L +    D ++ V+  M   G  P+       + S  +AG+ D A  LL  
Sbjct: 195 KECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKD 254

Query: 217 FR-------PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
                    P +VT     YN ++N L ++   ++A  +  +  RL  +   +T+N LI 
Sbjct: 255 MEARAAGCLPNDVT-----YNVVINGLARKGELEKAAQLV-DIMRLSKKASAFTYNPLIT 308

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL     V+KA     +M + G  P +VTYNTLI GL +            E++ K    
Sbjct: 309 GLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKG-LL 367

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD++TY S+I+GYCK G + +A  ++ ++   G+ P+ +T+N+LIDG+ ++G++  A  +
Sbjct: 368 PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL 427

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           +E M     LPDV T++ L++G C    L       DEM  K L P+ + +   I+A   
Sbjct: 428 KEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELT 487

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              + +A +  +++    +      YN +IDG CK G++ +A V+  +M     + D VT
Sbjct: 488 IGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +T LI  HC +GR++EA +IF+ M+  G +P  +T    I    + G
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRG 594



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 193/410 (47%), Gaps = 1/410 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + LS   S  TYN ++  L      +    +   M ++G +P        +    + G  
Sbjct: 292 MRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNA 351

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +AA+    + R   +      YNSL+N   K  N  +A+ +F +  R    P   T+NIL
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  R+G+++ A     +M    C PD+ TY  L++G C V  +A       E+  K  
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKG- 470

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD   Y + IS    +G +  A  +  EM   GI    VT+NVLIDG  K G++  A 
Sbjct: 471 LEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAY 530

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +M++ G   D VT++ LI  +C  G+L +   + D M    LSP+V T+TI I+  
Sbjct: 531 VLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTY 590

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+   L  A  + +++    + P    YN ++   C+ G  + A     EM E+   P+K
Sbjct: 591 CRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNK 650

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
            T+T+LI G C +G  V AI ++ +M + G  PD  T N+L     +G M
Sbjct: 651 YTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHM 700



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 173/344 (50%), Gaps = 4/344 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L  L      D+   ++ +  +L  +P  +T+N L+    + G + +A     DM +
Sbjct: 198 NCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEA 257

Query: 290 --FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              GC P+ VTYN +I+GL R  E+ +  +L+  ++   + S    TY  +I+G      
Sbjct: 258 RAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKAS--AFTYNPLITGLLARDF 315

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           ++KA  +  EM + GI P+ VT+N LIDG  K GN  +A+   + M + G LPD++T++S
Sbjct: 316 VEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNS 375

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+GYC+ G L Q L L  ++K   L P V T+ ILI+  C+   L  ARR  +++   D
Sbjct: 376 LINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEED 435

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
            +P    Y  +++G C   N+    +   EM  K  +PD   +   I      G +  A 
Sbjct: 436 CLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAF 495

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +  +M+  G + D +T N LI  L K G   +A+ +  +   D
Sbjct: 496 QLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTD 539



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 3/231 (1%)

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM--LSFGYLPDVV 403
            + D    +Y++M   G++PS  T+N L+D F K G M  A  + + M   + G LP+ V
Sbjct: 208 ARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDV 267

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T++ +I+G  R G+L +  +L D M+      + +T+  LI  L   + +  A   L ++
Sbjct: 268 TYNVVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLITGLLARDFVEKAGALLLEM 326

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +   +VP    YN +IDG  K GN + A V   EM  K   PD +T+  LI G+C  G +
Sbjct: 327 ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNL 386

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            +A+ +F  + R G  P  +T N LI    + G    A R+ +  +E+  L
Sbjct: 387 KQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCL 437



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 38/273 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY ++M   C +     V++ FD M S G  P+       +S+ +  G    A  L  + 
Sbjct: 442 TYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEM 501

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEA----VYMFKEYFRL----YS------------ 257
               ++  T  YN L++ L K  +  +A    + M  +  RL    Y+            
Sbjct: 502 MLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRL 561

Query: 258 ---------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                           P   T+ I I    R G +  A+ +F  M   G  P+ VTYN L
Sbjct: 562 IEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVL 621

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           +  LCR+      ++   E+  +    P+  TYT +I G CK G    A  +Y EM+  G
Sbjct: 622 MHALCRMGRTESAYQHFHEM-LERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG 680

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSA-EYMRERML 394
           I P   T N L  GFG+ G+M  A +Y+   +L
Sbjct: 681 IHPDHCTHNALFKGFGE-GHMYDAVQYLENVVL 712



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            Q L    EM    ++P V     ++  L    R +D R     +    + P  F YN +
Sbjct: 176 TQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTL 235

Query: 479 IDGFCKAGNVDEANVIVAEMEEKR--CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
           +D FCKAG +D+A  ++ +ME +   C P+ VT+ ++I G   KG + +A  + + M R+
Sbjct: 236 LDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RL 294

Query: 537 GCAPDDITVNSLISCLL 553
                  T N LI+ LL
Sbjct: 295 SKKASAFTYNPLITGLL 311


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 191/352 (54%), Gaps = 6/352 (1%)

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           AK L   + P  +T++T     L+  L  +    +A+    +   L    +  ++  LI 
Sbjct: 131 AKILKMGYEPNVITLTT-----LIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL ++G+   A +    +      P++V YNT+I  +C+V  V    +L  E+  K   S
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG-IS 244

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDVVTY ++ISG+C +GKM  AT ++N+M    I P+  TFN+L+DGF K   +  A+ +
Sbjct: 245 PDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNV 304

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+  G  PDV T++SL+D YC   ++N+   + + +  + ++PN+++++I+I+  CK
Sbjct: 305 LAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCK 364

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             ++++A    K++  N+++P    YN +IDG CK G +  A  +V EM ++    DK+T
Sbjct: 365 IKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKIT 424

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +  ++   C   ++ +AI++  KM   G  PD  T  +L+  L K G   +A
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDA 476



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 249/483 (51%), Gaps = 11/483 (2%)

Query: 93  FWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNS-LEVIKRLDN--PKLGLKFLEFSRVN 149
           F F K++ +L+ +S++ S   + +   + + + S L ++  L N   +LG   L FS + 
Sbjct: 73  FQFGKILGSLV-KSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLA 131

Query: 150 LSLNHSFK----TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
             L   ++    T   +++ LC  G +H ++Q   D + + G   N       ++   + 
Sbjct: 132 KILKMGYEPNVITLTTLIKGLCLKGQIHQALQF-HDKVVALGFHLNKVSYGTLINGLCKV 190

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G+  AA  LL +     V  +  MYN++++++ K    +EA  ++ E       PD  T+
Sbjct: 191 GQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTY 250

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           N LI G   +G++K A + F  M     +P++ T+N L+ G C+   +     +L  +  
Sbjct: 251 NALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL-AMMM 309

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    PDV TY S++  YC + +++KA  I+N ++  G+ P+  +++++I GF K+  + 
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  + + M     +PDVVT++SLIDG C+ G+++  LKL DEM  + +  +  T+  ++
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +ALCK ++++ A   L ++K   + P    Y  ++DG CK G +++A ++  ++  K   
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            D   +T +I G C  G   E++ + +KM   GC P+ +T   +I  L      ++A ++
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKL 549

Query: 565 MQR 567
           ++ 
Sbjct: 550 LRE 552



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 195/389 (50%), Gaps = 4/389 (1%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   + +F   + S +++        L  Q     +T    + + L+N   +      + 
Sbjct: 68  PKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSF 127

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  ++  +P+  T   LI+GL   G++ +A +F   + + G   + V+Y TLI+GL
Sbjct: 128 SVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGL 187

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+V + +   +LL+ V  K    P+VV Y ++I   CK+  +++A  +Y+EM S GI P 
Sbjct: 188 CKVGQTSAALQLLRRVDGKL-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 246

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT+N LI GF  VG M  A  +  +M+     P+V TF+ L+DG+C+  +L +   +  
Sbjct: 247 VVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLA 306

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M  + + P+V+T+  L++  C    +N A+     +    + P    Y+ +I GFCK  
Sbjct: 307 MMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIK 366

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            VDEA  +  EM      PD VT+  LI G C  G++  A+ + ++M   G   D IT N
Sbjct: 367 KVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYN 426

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           S++  L K    ++A  ++ +  +D+ +Q
Sbjct: 427 SILDALCKNHQVDKAIALLTKM-KDEGIQ 454



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 71/341 (20%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C +G       +F+ M  +   PN       V    +  +   AK +L+  
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 218 RPGEVTMSTFMYNSLLN--ALVKQNN---------------------------------A 242
               +    F YNSL++   LVK+ N                                  
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           DEA+ +FKE       PD  T+N LI GL ++G++  A +   +M   G   D +TYN++
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           +  LC+ ++V +   LL ++K      PD+ TYT+++ G CK G+++ A  ++       
Sbjct: 429 LDALCKNHQVDKAIALLTKMK-DEGIQPDICTYTTLVDGLCKNGRLEDARIVF------- 480

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                                       E +L  GY+ DV  ++++I G+C +G  ++ L
Sbjct: 481 ----------------------------EDLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            L  +M+     PN  T+ I+I +L  ++  + A + L+++
Sbjct: 513 DLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 78/141 (55%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           +  KN  P+++ F  ++ +L K N  +      +Q+++N +     + + +I+ F + G 
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
              +  ++A++ +   +P+ +T T LI G C+KG++ +A+   +K++ +G   + ++  +
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 548 LISCLLKGGMPNEAFRIMQRA 568
           LI+ L K G  + A ++++R 
Sbjct: 183 LINGLCKVGQTSAALQLLRRV 203


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 179/346 (51%), Gaps = 4/346 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ST   N+LL  LV     D A   F+   R    PD +TFN +I GL RIG+++KA +  
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE---LLKEVKFKSEFSPDVVTYTSVISG 341
            D+ ++G +P + TYN+LI G C+       +    LLKE+  ++  SP  VT+  +I+G
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAVTFGVLING 273

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YCK      A  ++ EM   GI  S VT+N LI G    G +     + E M   G  P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            +TF  ++ G+C+ G +       D M  +N+ P+V  +TILI+   +  ++ DA    +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +    + P    YN +I GF ++G+   A+ ++ EM+EK  + D VT+ +LI   C KG
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            + +A+ + ++M  +G  P+ +T N++I      G    A+ I  R
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 192/388 (49%), Gaps = 8/388 (2%)

Query: 191 SPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           SP I  F   +S   R G+   A  +    +   +  S   YNSL++   K+  A    +
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 248 ---MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
              + KE       P   TF +LI G  +      A   F +M   G +  +VTYN+LIS
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC   +V  G +L++E++     SP+ +T+  V+ G+CK G M  A    + M    ++
Sbjct: 308 GLCSEGKVEEGVKLMEEME-DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  V + +LIDG+ ++G M  A  ++E M   G  P+V T++ LI G+ R+G       L
Sbjct: 367 PDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEMK K +  +V T+ +LI ALC +  +  A + L ++    L P    YN +I GFC 
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            GN+  A  I   ME+ R + + VT+ + I   C  G+M EA  + N+ML     P+ IT
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546

Query: 545 VNSLISCLL-KGGMPNEAFRIMQRASED 571
             ++   ++ KG  P+     + +ASE+
Sbjct: 547 YETIKEGMMEKGYTPDIRGCTVSQASEN 574



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 165/316 (52%), Gaps = 4/316 (1%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P T + N L+ GL     V  A + F        SPDI T+NT+ISGLCR+ ++ +  +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCK---LGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
           + K++K     +P V TY S+I GYCK    G M     +  EM   GI P+AVTF VLI
Sbjct: 213 VAKDIKAWG-LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+ K  N  +A  + E M   G    VVT++SLI G C  G++ +G+KL +EM+   LS
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PN  TF  ++   CK+  + DA  ++  +   ++ P   +Y  +IDG+ + G +++A  +
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAV 391

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              M +K   P+  T+  LI G    G    A  + ++M   G   D +T N LI  L  
Sbjct: 392 KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCC 451

Query: 555 GGMPNEAFRIMQRASE 570
            G   +A +++   SE
Sbjct: 452 KGEVRKAVKLLDEMSE 467



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 4/338 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDS---VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           L  S  TYN ++   C+ G   +   V ++   M   G  P +      ++   +     
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           AA  +  + +   +  S   YNSL++ L  +   +E V + +E   L   P+  TF  ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +G  + G +  A ++   M      PD+V Y  LI G  R+ ++      +KE   K   
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA-VKEAMAKKGI 400

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP+V TY  +I+G+ + G    A+G+ +EM   GI+   VT+NVLI      G +  A  
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G  P+ +T++++I G+C  G +    ++   M+      NV T+ + I   C
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFC 520

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +  ++++A   L ++    LVP    Y  + +G  + G
Sbjct: 521 QIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 4/271 (1%)

Query: 300 NTLISGLCRVNEVARGHE-LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           + L+  L R ++  R ++  L   +      P   +  ++++G     ++D A   +   
Sbjct: 123 DMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSA 182

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
               + P   TFN +I G  ++G +  A  + + + ++G  P V T++SLIDGYC+ G  
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 419 NQGLK---LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
                   L  EM    +SP   TF +LIN  CK +    A R  +++K   +      Y
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I G C  G V+E   ++ EME+    P+++TF  ++ G C KG M +A    + M  
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               PD +    LI    + G   +A  + +
Sbjct: 363 RNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           G+K +E    +L L+ +  T+  V++  C+ G+        D M      P+  +    +
Sbjct: 318 GVKLME-EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILI 376

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               R GK + A  +        ++ +   YN L+    +  +   A  +  E      +
Sbjct: 377 DGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            D  T+N+LI  L   GEV+KA +   +M   G  P+ +TYNT+I G C    +   +E+
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
              ++ K     +VVTY   I  +C++GKMD+A  + NEM    + P+ +T+        
Sbjct: 497 RTRME-KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITY-------- 547

Query: 379 KVGNMVSAEYMRERMLSFGYLPDV 402
                   E ++E M+  GY PD+
Sbjct: 548 --------ETIKEGMMEKGYTPDI 563


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 209/426 (49%), Gaps = 1/426 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L  S +T N V+     MGL +  + +F  M   G  P+    +  V +C   G+  
Sbjct: 182 NQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVL 241

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A+  L+        +       +++A  ++   +  V  F +   +   P+   F  LI
Sbjct: 242 EAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALI 301

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G +K+AFE   +M   G  P++ T+ TLI GLC+     +   L  ++     +
Sbjct: 302 NGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY 361

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+V TYT++I+GYCK  K+++A  + + M   G+ P+  T+  LIDG  KVGN V A  
Sbjct: 362 KPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYE 421

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G+ P++ T++++IDG C+ G L++  +L +++    L  +  T+TIL++  C
Sbjct: 422 LMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHC 481

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           ++   N +  F  ++      P    Y  +I  FC+   + E+  +  E       P K 
Sbjct: 482 RQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKK 541

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+T +I G+C  G    A+ +F +M   GCAPD IT  +LIS L K    ++A R +  A
Sbjct: 542 TYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA-RNLYDA 600

Query: 569 SEDQNL 574
             D+ L
Sbjct: 601 MMDKGL 606



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 206/416 (49%), Gaps = 2/416 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++ L++ + C MG     +   + M   G + ++      + +  + G  +   G   + 
Sbjct: 226 SFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   + +L+N L KQ +  +A  + +E  R   +P+ +T   LI GL + G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 278 KKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +KAF  F  +  S G  P++ TY  +I+G C+ +++ R   LL  ++ +    P+  TYT
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ-EQGLVPNTNTYT 404

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+CK+G   +A  + + M   G  P+  T+N +IDG  K G++  A  +  ++   
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   D VT++ L+  +CR    N+ L   ++M     +P+++++T LI+  C++ ++ ++
Sbjct: 465 GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKES 524

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R  ++     L+P    Y  +I G+C+ GN   A  +   M    C PD +T+  LI G
Sbjct: 525 ERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            C + ++ +A ++++ M+  G +P ++T  +L     K    + A  ++ R  + Q
Sbjct: 585 LCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 171/361 (47%), Gaps = 37/361 (10%)

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           EAV M  E       P T T N ++     +G V+ A   F +M   G SPD V++  ++
Sbjct: 172 EAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMV 231

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
              C +  V      L  +  +  F  D  T T +I  +C+ G +++  G + +M   G+
Sbjct: 232 VACCNMGRVLEAERWLNAM-VERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGL 290

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ + F  LI+G  K G++  A  + E M+  G+ P+V T ++LIDG C+ G   +  +
Sbjct: 291 APNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFR 350

Query: 424 LCDEM-KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP---------- 472
           L  ++ +     PNV+T+T +IN  CKE++LN A   L +++   LVP            
Sbjct: 351 LFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGH 410

Query: 473 -------------------------FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
                                    + YN +IDG CK G++DEA  ++ ++     + D 
Sbjct: 411 CKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+TIL+  HC +     ++  FNKML++G  PD  +  +LIS   +     E+ R+ + 
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEE 530

Query: 568 A 568
           A
Sbjct: 531 A 531



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 153/347 (44%), Gaps = 8/347 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+    +  +++   M+  G +PN+      +    + G    A  L+   
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + + + YN++++ L K+ + DEA  +  +      Q D  T+ IL+    R  + 
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++  FF  M   G +PDI +Y TLIS  CR  ++     L +E        P   TYTS
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEA-VSLGLIPTKKTYTS 545

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+ G    A  ++  M++ G  P ++T+  LI G  K   +  A  + + M+  G
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT  +L   YC+    +  + + D ++ +     + T   L+  LC E +L+ A 
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAA 662

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
            F  +L    L  +P +    + GF           +V+E+ E+ C+
Sbjct: 663 LFFHKL----LDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERICE 705



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 1/227 (0%)

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           GK+ +A  +  EM + G+ PS  T N ++D    +G +  AE M   M   G  PD V+F
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
             ++   C  G++ +  +  + M  +    +  T T++I+A C++  +N    +  ++  
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L P    +  +I+G CK G++ +A  ++ EM  +  KP+  T T LI G C KG   +
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 526 AISIFNKMLRI-GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           A  +F K++R  G  P+  T  ++I+   K    N A  ++ R  E 
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 58/129 (44%)

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           KNL         ++    +  +L +A   + +++   LVP     N V+D     G V+ 
Sbjct: 148 KNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEI 207

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +  EM ++   PD V+F ++++  C  GR++EA    N M+  G   D+ T   +I 
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIID 267

Query: 551 CLLKGGMPN 559
              + G  N
Sbjct: 268 AFCQKGYVN 276


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 206/395 (52%), Gaps = 1/395 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++ SL +M  + +V  +   M + G +P+   +   ++     G+   +  +L +     
Sbjct: 16  ILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 75

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
              +T + N+L+  L  +    ++++   +      Q D  ++ IL+ GL +IGE + A 
Sbjct: 76  YQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAI 135

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +    +      PD+V Y+T+I GLC+   V   ++L  E+  +  F PDV+TYT++I G
Sbjct: 136 KLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIF-PDVITYTTLICG 194

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +C  G++ +A G+ NEM    I P+  T+N LID   K G +  ++ +   M   G  PD
Sbjct: 195 FCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPD 254

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VV +S L+DGYC  G++ +  ++   M    ++P+VY++ I+IN LCK  R+++A   L+
Sbjct: 255 VVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLR 314

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++   +++P    Y+ +IDG CK G +     +  EM  +    + VT+  L+ G C   
Sbjct: 315 EMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQ 374

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            + +AI++F KM   G  P+  T  +LI  L KGG
Sbjct: 375 NLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGG 409



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 196/408 (48%), Gaps = 1/408 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N +M+ LC  G         D + + G   +       ++   + G+   A  LL     
Sbjct: 84  NTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIED 143

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
                   MY+++++ L K    DEA  ++ E       PD  T+  LI G    G++ +
Sbjct: 144 RSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLME 203

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           AF    +M     +P+I TYNTLI  LC+  +V     LL  V  K    PDVV Y+ ++
Sbjct: 204 AFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLL-AVMTKKGVKPDVVIYSILM 262

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            GYC +G++ KA  I+  M   G+ P   ++N++I+G  K   +  A  +   ML    +
Sbjct: 263 DGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMI 322

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD VT+SSLIDG C+ G++   L L  EM  +    N+ T+  L++ LCK   L+ A   
Sbjct: 323 PDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIAL 382

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++K   + P  + Y  +IDG CK G + +   +   +  K    D  T+T++I G C 
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +G   EA+++ +KM   GC P+ +T   +I  LL+    ++A +++  
Sbjct: 443 EGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHE 490



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 184/383 (48%), Gaps = 1/383 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y +++  LC++G       +   +      P+  M    +    +    D A  L S+ 
Sbjct: 117 SYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEM 176

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +L+          EA  +  E       P+ +T+N LI  L + G+V
Sbjct: 177 NARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKV 236

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K++      M   G  PD+V Y+ L+ G C V EV +  ++   V  ++  +PDV +Y  
Sbjct: 237 KESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL-VMVQTGVNPDVYSYNI 295

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK  ++D+A  +  EM    + P  VT++ LIDG  K+G + +   + + M   G
Sbjct: 296 IINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG 355

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++VT++SL+DG C+N  L++ + L  +MK + + PN YT+T LI+ LCK  RL   +
Sbjct: 356 QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQ 415

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + L         + Y  +I G CK G  DEA  + ++ME+  C P+ VTF I+I   
Sbjct: 416 ALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSL 475

Query: 518 CMKGRMVEAISIFNKMLRIGCAP 540
             K    +A  + ++M+  G  P
Sbjct: 476 LEKDENDKAEKLLHEMIAKGLLP 498



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 162/309 (52%), Gaps = 1/309 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P    F  ++  L ++            M + G  PD+VT + LI+  C + ++A    +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L ++  K  + P+ +   +++ G C  G++ K+   ++++ + G +   V++ +L++G  
Sbjct: 68  LGKI-LKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K+G    A  +   +      PDVV +S++IDG C++  +++   L  EM  + + P+V 
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+T LI   C   +L +A   L ++   ++ P  + YN +ID  CK G V E+  ++A M
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +K  KPD V ++IL+ G+C+ G + +A  IF  M++ G  PD  + N +I+ L KG   
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRV 306

Query: 559 NEAFRIMQR 567
           +EA  +++ 
Sbjct: 307 DEAMNLLRE 315



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 1/285 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N +  TYN ++ +LC+ G     + +   M   G  P+  +    +      G+   A
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K +        V    + YN ++N L K    DEA+ + +E       PDT T++ LI G
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDG 334

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L ++G +    +   +M   G   ++VTYN+L+ GLC+   + +   L  ++K +    P
Sbjct: 335 LCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG-IQP 393

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +  TYT++I G CK G++ K   ++  +   G      T+ V+I G  K G    A  M+
Sbjct: 394 NKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMK 453

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
            +M   G +P+ VTF  +I       + ++  KL  EM  K L P
Sbjct: 454 SKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 99/253 (39%), Gaps = 36/253 (14%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   +N    +YN+++  LC+    D    +   M     +P++      +    + G+ 
Sbjct: 282 VQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRI 341

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
                L  +        +   YNSLL+ L K  N D+A+ +F +      QP+ +T+  L
Sbjct: 342 TTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTAL 401

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL + G +KK    F  +   G   D+ TY  +ISGL                     
Sbjct: 402 IDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGL--------------------- 440

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
                          CK G  D+A  + ++M   G  P+AVTF ++I    +      AE
Sbjct: 441 ---------------CKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAE 485

Query: 388 YMRERMLSFGYLP 400
            +   M++ G LP
Sbjct: 486 KLLHEMIAKGLLP 498



 Score = 45.4 bits (106), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P    +  ++    K  +      +  +ME K   PD VT +ILI   C  G+M  + S
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 529 IFNKMLRIGCAPDDITVNSLISCL-LKG 555
           +  K+L++G  P+ I +N+L+  L LKG
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKG 94



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 67/139 (48%), Gaps = 1/139 (0%)

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P +  F  ++ +L K           KQ++   +VP     + +I+ FC  G +  +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           + ++ +   +P+ +    L+ G C+KG + +++   +K++  G   D ++   L++ L K
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 555 GGMPNEAFRIMQRASEDQN 573
            G    A +++ R  ED++
Sbjct: 128 IGETRCAIKLL-RTIEDRS 145


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 200/428 (46%), Gaps = 5/428 (1%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L  L+      ++  SF++YN V+ +L     H    +++  M  D   P +       
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
            +  R G+   A  LL             +Y ++++ALV Q    EA  +  E   +   
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            D  TFN ++ GL  +G V++A      M   GC+P +VTY  L+ GLCR  +    + +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  V        +VV   +VI G    GK+ +AT +Y  M S G  P   T+N+L+ G  
Sbjct: 308 LGRVP-----EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K+G   SA  M + M   G  P++VT+S+L+  +CRNG  +    + D+M  K  S N  
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +I AL K+ +L++A R ++++K     P    YN +I   C    +DEA  I   +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            E+    + +T+  LI      GR  E + + N+M+  GC  D ++ N LI  L K G  
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542

Query: 559 NEAFRIMQ 566
           + +  +++
Sbjct: 543 DRSMMLLE 550



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 197/411 (47%), Gaps = 5/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N V+  LC +G       + D M   G  P+     F +    R  + D A  +L   
Sbjct: 252 TFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLG-- 309

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R  EV  +  M N+++   + +     A  +++        PD  T+NIL+ GL ++G  
Sbjct: 310 RVPEV--NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M   GC+P+IVTY+TL+   CR         +L ++  K  FS +   Y  
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKG-FSMNSQGYNG 426

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I    K GK+D+A  +  EM S G KP   T+N +I        M  AE++   +L  G
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG 486

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + +T+++LI     +G+  +GL+L +EM       +V ++  LI ALCKE  ++ + 
Sbjct: 487 VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSM 546

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    + P  F YN +I+  CKAG V +A  +  EM  +   PD VT+  LI G 
Sbjct: 547 MLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 606

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           C  G    A+++  K+      PD +T N LIS   K  + ++A  ++ +A
Sbjct: 607 CKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKA 657



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 165/328 (50%), Gaps = 1/328 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            TYN++M  LC++G   S   + D M   G  PN       + S  R G  D A+ +L Q
Sbjct: 352 HTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQ 411

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 +M++  YN ++ AL K    DEA+ + +E      +PD  T+N +I  L    +
Sbjct: 412 MSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQ 471

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A   F ++   G   + +TYNTLI  L        G  L  E+        DVV+Y 
Sbjct: 472 MDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG-CPLDVVSYN 530

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I   CK G +D++  +  EM + GIKP+  ++N+LI+   K G +  A  + + ML+ 
Sbjct: 531 GLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ 590

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD+VT+++LI+G C+ G  +  L L +++  +N+ P++ T+ ILI+  CK   L+DA
Sbjct: 591 GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 650

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
              L +     +VP    +  ++  F +
Sbjct: 651 SMLLDKAVSGGIVPNERTWGMMVQNFVR 678


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 203/408 (49%), Gaps = 4/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G  ++   V D M      P+       + S   +GK   A  +L + 
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +       Y  L+ A  + +    A+ +  E       PD  T+N+L+ G+ + G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +F  DM S GC P+++T+N ++  +C         +LL ++  +  FSP VVT+  
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNI 349

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C+ G + +A  I  +M   G +P+++++N L+ GF K   M  A    ERM+S G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+++++   C++G++   +++ +++  K  SP + T+  +I+ L K  +   A 
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L +++  DL P    Y+ ++ G  + G VDEA     E E    +P+ VTF  +++G 
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C   +   AI     M+  GC P++ +   LI  L   GM  EA  ++
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 203/420 (48%), Gaps = 4/420 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
            +S VN S        N  +R +   G  +      + M   G++P+       +    R
Sbjct: 90  HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            GK   A  +L              YN +++   K    + A+ +     R+   PD  T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVT 206

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N +++ L   G++K+A E    M    C PD++TY  LI   CR + V    +LL E++
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +   +PDVVTY  +++G CK G++D+A    N+M S G +P+ +T N+++      G  
Sbjct: 267 DRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           + AE +   ML  G+ P VVTF+ LI+  CR G L + + + ++M      PN  ++  L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           ++  CKE +++ A  +L+++      P    YN ++   CK G V++A  I+ ++  K C
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P  +T+  +I G    G+  +AI + ++M      PD IT +SL+  L + G  +EA +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 196/388 (50%), Gaps = 1/388 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +S++    TYN ++RSLC+ G       V D M      P+       + +  R      
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  LL + R    T     YN L+N + K+   DEA+    +      QP+  T NI+++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            +   G    A +   DM   G SP +VT+N LI+ LCR   + R  ++L+++  +    
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGCQ 376

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+ ++Y  ++ G+CK  KMD+A      M S G  P  VT+N ++    K G +  A  +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++ S G  P ++T++++IDG  + G+  + +KL DEM+ K+L P+  T++ L+  L +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E ++++A +F  + +   + P    +N ++ G CK+   D A   +  M  + CKP++ +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +TILI G   +G   EA+ + N++   G
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 4/307 (1%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  T+N++I G  + GE+  A      M     SPD+VTYNT++  LC   ++ +  E+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +  + +  PDV+TYT +I   C+   +  A  + +EM   G  P  VT+NVL++G  
Sbjct: 227 LDRM-LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G +  A      M S G  P+V+T + ++   C  G+     KL  +M  K  SP+V 
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TF ILIN LC++  L  A   L+++  +   P    YNP++ GFCK   +D A   +  M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             + C PD VT+  ++   C  G++ +A+ I N++   GC+P  IT N++I  L K G  
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 559 NEAFRIM 565
            +A +++
Sbjct: 466 GKAIKLL 472



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 172/340 (50%), Gaps = 4/340 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+ L  +V+    +E     +      + PD      LI+G  R+G+ +KA +    +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  PD++TYN +ISG C+  E+     +L  +      SPDVVTY +++   C  GK+ 
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLK 221

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  + + M      P  +T+ +LI+   +   +  A  + + M   G  PDVVT++ L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +G C+ G+L++ +K  ++M      PNV T  I++ ++C   R  DA + L  +      
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    +N +I+  C+ G +  A  I+ +M +  C+P+ +++  L+ G C + +M  AI  
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
             +M+  GC PD +T N++++ L K G   +A  I+ + S
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 158/315 (50%), Gaps = 3/315 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAKGLLSQ 216
           TYN+++  +C+ G  D      + M S G  PN       + S    G+  DA K L   
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G  + S   +N L+N L ++     A+ + ++  +   QP++ ++N L+ G  +  +
Sbjct: 336 LRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A E+   M S GC PDIVTYNT+++ LC+  +V    E+L ++  K   SP ++TY 
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYN 453

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +VI G  K GK  KA  + +EM +  +KP  +T++ L+ G  + G +  A          
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+ VTF+S++ G C++ Q ++ +     M  +   PN  ++TILI  L  E    +A
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573

Query: 457 RRFLKQLKWNDLVPK 471
              L +L    L+ K
Sbjct: 574 LELLNELCNKGLMKK 588


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 195/399 (48%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN+++R     G  DS   +F  M+  G  P+     F V++  +AG+   A+      
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +   YN L++A  K    D A+ +F E  R   QP   T+NIL+  L   G V
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F+ M   GCSPD  TY+TL++GL +   V   H++ +E+  +   + D+V Y S
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG-VAVDLVNYNS 280

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++   K G MD+   +  EM+  G  P A +FN ++D  GK     +A  +  RM+  G
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+++++ LID Y R G   Q  ++ +EM      P   T+  LI+ L  + ++++A 
Sbjct: 341 CKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAF 400

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L++++     P    YN ++D   K G    A  +  +M++K  +PD +++ + I G 
Sbjct: 401 AVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
               R+ EA+ +F  M  +GC  D      LI    + G
Sbjct: 461 AFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 198/411 (48%), Gaps = 4/411 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF---VSSCIRAGKCDAAKGLLSQ 216
           N +++ +   G  +     FD          SP +  F   +   + +G+ + A+ +  +
Sbjct: 31  NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKK 90

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                  +  F YN L+    +    D A+ MF+E     S+PD +T+  L+  L + G 
Sbjct: 91  LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V++A  FF  M   G +P+I TYN L+    +V ++     L  E+K +  F P VVTY 
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG-FQPSVVTYN 209

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++   C  G++  A  ++++M   G  P + T++ L++G GK G +  A  +   M+  
Sbjct: 210 ILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR 269

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   D+V ++SL+    + G +++  KL  EM  K   P+ ++F  +++AL K N+ + A
Sbjct: 270 GVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAA 329

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R    ++  +   P    YN +ID + + G+  +A  ++ EM E    P+  T+  LI  
Sbjct: 330 REVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHW 389

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
               G++ EA ++  +M   GC PD +T N L+  L K G    A R+ Q+
Sbjct: 390 LATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQ 440



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 195/401 (48%), Gaps = 1/401 (0%)

Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS 225
           L   G+ D ++ +   M ++G       +   +++  R  K   A  L +Q      + +
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPT 64

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
              +  L++ LV     + A  ++K+  +   Q D + +N+LI+   R G++  A E F 
Sbjct: 65  VHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR 124

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +M   G  PD  TY  L++ L +   V        +   +   +P++ TY  ++  + K+
Sbjct: 125 EMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFF-DAMLERGLTPNIPTYNLLMDAFRKV 183

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G++D A G++ EM   G +PS VT+N+L+D     G + +A  +  +M   G  PD  T+
Sbjct: 184 GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTY 243

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S+L++G  ++G++ +  K+  EM  + ++ ++  +  L+  L K   ++   + +K++  
Sbjct: 244 STLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSR 303

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P  F +N ++D   KA   D A  + A M E  CKPD +++ ILI  +   G   +
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           A  +  +M+  G  P+  T NSLI  L   G  +EAF +++
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLE 404



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 159/323 (49%), Gaps = 5/323 (1%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +++   + +LD   LGL F E  R       S  TYN+++ +LC  G   + + +F  M 
Sbjct: 177 MDAFRKVGQLDMA-LGL-FAEMKR--RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT 232

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
            DG  P+S      V+   ++G+ + A  +  +     V +    YNSLL  L K  N D
Sbjct: 233 GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD 292

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
               + KE  R    PD ++FN ++  L +  +   A E F  M   GC PD+++YN LI
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
               R  + A+  ++L+E+  ++ F P+  TY S+I      G++D+A  +  EM + G 
Sbjct: 353 DSYARFGDAAQARQMLEEM-VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGC 411

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P  VT+N L+D  GK G    A  + ++M   G  PD ++++  IDG   + +L++ L 
Sbjct: 412 RPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALV 471

Query: 424 LCDEMKGKNLSPNVYTFTILINA 446
           L  +MK      +   + ILI A
Sbjct: 472 LFKDMKAVGCPVDKAMYRILIRA 494



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 160/338 (47%), Gaps = 1/338 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  +  TYNL+M +  ++G  D    +F  M+  G  P+       + +   AG+  AA+
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAAR 225

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  +      +  ++ Y++L+N L K    +EA  +F+E        D   +N L+  L
Sbjct: 226 KLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATL 285

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           ++ G + + ++   +M   G  PD  ++NT++  L + N+     E+   +  +S   PD
Sbjct: 286 AKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM-VESGCKPD 344

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +++Y  +I  Y + G   +A  +  EM   G  P   T+N LI      G +  A  + E
Sbjct: 345 LISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLE 404

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M + G  PDVVT++ L+D   + G+  +  +L  +MK K + P+  ++ + I+ L  ++
Sbjct: 405 EMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDD 464

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
           RL++A    K +K         MY  +I    +AG+ +
Sbjct: 465 RLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 4/173 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++ S    G     + + + M   G +P +      +      G+ D A  +L + 
Sbjct: 347 SYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN L++ L K+     A  +F++      +PDT ++ + I GL+    +
Sbjct: 407 ETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRL 466

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
            +A   F DM + GC  D   Y  LI    R  +     EL  ++K +S+F P
Sbjct: 467 DEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDT----ELEAQLKHESQFMP 515


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 207/422 (49%), Gaps = 5/422 (1%)

Query: 148 VNLSLNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           +NL  +H F     +YN +   L   GL D +  +F  M +DG  PN       V++  +
Sbjct: 143 LNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCK 202

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G    AK              +F Y SL+    K +   +A  +F+   +     +  +
Sbjct: 203 IGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVS 262

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  LI G   +G++ +A E F+ M   GC PD+ TY  L++  C V +     +  +E+ 
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEM- 321

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            ++   P+V TYT +I  +CK+GKMD+   + + M   G+  S V FN LIDG+ K G M
Sbjct: 322 VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMM 381

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + + M      P+  T++ LI G+CR   +++ + L ++M    LSPN+ T+  L
Sbjct: 382 EDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTL 441

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK   ++ A R    +  +  VP    +   ID  CK G V++A+ +   ++EK  
Sbjct: 442 IHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA 501

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           + ++  +T LI G+C   +  +A  +F +ML  GC P+ IT N L+  L K G   +A  
Sbjct: 502 EANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMS 561

Query: 564 IM 565
           ++
Sbjct: 562 LV 563



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 236/479 (49%), Gaps = 32/479 (6%)

Query: 101 TLLLRSSYLSDTCARYLCEKLSP--LNSLEVIKRLDNPKL----GLKFLEFSRVNLSLNH 154
           T+LL+  +  +     L   L+P  L+SL      +NP L     L F ++        H
Sbjct: 47  TILLQPQWRKNPSFNTLIPSLTPTHLSSL-----FNNPNLHPLTALNFFKWIHYQHGFIH 101

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  +Y  ++  L   G          ++R+  ++ NS      + SC+ + +   A+ +L
Sbjct: 102 TVHSYQPLLFILVRNG----------FLRAAENVRNS-----MIKSCVSSHE---ARFVL 143

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +     E ++S   YN L   L +    DE   +FK+      +P+  +FN ++    +I
Sbjct: 144 NLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKI 203

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A  +F  +  FG   D  TY +LI G C+++E+   +++  E+  +     + V+
Sbjct: 204 GNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVF-EIMPQEGCLRNEVS 262

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G+C++GK+D+A  ++ +M   G  P   T+ VL+  F +VG    A    E M+
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMV 322

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+V T++ LID +C+ G++++G+++   M  K L  +V  F  LI+  CK   + 
Sbjct: 323 ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMME 382

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA   L  +K N + P    YN +I GFC+  ++D A  ++ +M E +  P+ VT+  LI
Sbjct: 383 DAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442

Query: 515 IGHCMKGRMVE-AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            G C K R+V+ A  + + M++ G  PD  T  + I CL K G   +A ++ +   E  
Sbjct: 443 HGLC-KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH 500



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 189/399 (47%), Gaps = 7/399 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ + CE+G        F+ M  +G  PN       +    + GK D    +LS  
Sbjct: 297 TYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM 356

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   +N+L++   K+   ++A+ +          P++ T+N LI G  R   +
Sbjct: 357 LEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSM 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
            +A      M     SP++VTYNTLI GLC+   V+   R H L+     K  F PD  T
Sbjct: 417 DRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLM----IKDGFVPDQRT 472

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           + + I   CK+GK+++A  ++  +     + +   +  LIDG+ K      A  + +RML
Sbjct: 473 FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRML 532

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+ +TF+ L+DG  + G++   + L D M   +  P V+T+TILI  + +E+  +
Sbjct: 533 FEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFD 592

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A  FL Q+  +   P    Y   I  +C+ G + EA  +V +++E+    D   + +L+
Sbjct: 593 RANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLV 652

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
             +   G++  A  +  +M   GC P   T + L+  L+
Sbjct: 653 NAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLI 691



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 191/414 (46%), Gaps = 1/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C++        VF+ M  +G L N       +      GK D A  L  Q 
Sbjct: 227 TYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQM 286

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +          Y  L+ A  +     EA+  F+E      +P+ +T+ +LI    ++G++
Sbjct: 287 KEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKM 346

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +  E    M   G    +V +N LI G C+   +     +L  +K  ++  P+  TY  
Sbjct: 347 DEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKL-NKVCPNSRTYNE 405

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+   MD+A  + N+M    + P+ VT+N LI G  K   + SA  +   M+  G
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PD  TF + ID  C+ G++ Q  ++ + +K K+   N + +T LI+  CK  + +DA 
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAH 525

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K++ +    P    +N ++DG  K G V++A  +V  M +   KP   T+TILI   
Sbjct: 526 LLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEI 585

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +     A    ++M+  GC P+ +T  + I    + G   EA  ++ +  E+
Sbjct: 586 LRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEE 639



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 184/410 (44%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++   CE+G  D    +F  M+ DG  P+ P     V++    GK   A     + 
Sbjct: 262 SYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEM 321

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + + Y  L++   K    DE + M               FN LI G  + G +
Sbjct: 322 VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMM 381

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A      M      P+  TYN LI G CR   + R   LL ++ ++++ SP++VTY +
Sbjct: 382 EDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKM-YENKLSPNLVTYNT 440

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK   +D A  +++ M   G  P   TF   ID   K+G +  A  + E +    
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH 500

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +   +++LIDGYC+  + +    L   M  +   PN  TF +L++ L KE ++ DA 
Sbjct: 501 AEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAM 560

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  +   D  P    Y  +I+   +  + D AN+ + +M    C+P+ VT+T  I  +
Sbjct: 561 SLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAY 620

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +GR++EA  +  K+   G   D    + L++     G  + AF ++ R
Sbjct: 621 CRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIR 670



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 216/507 (42%), Gaps = 64/507 (12%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            LKF E   V   +  +  TY +++   C++G  D    +   M   G + +       +
Sbjct: 314 ALKFFE-EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               + G  + A  +L   +  +V  ++  YN L+    ++ + D A+ +  + +     
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+  T+N LI GL +   V  A+   + M   G  PD  T+   I  LC++ +V + H++
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            + +K K   + + + YT++I GYCK  K   A  ++  M   G  P+++TFNVL+DG  
Sbjct: 493 FESLKEKHAEANEFL-YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLR 551

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G +  A  + + M  F   P V T++ LI+   R    ++     D+M      PNV 
Sbjct: 552 KEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVV 611

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG------------ 486
           T+T  I A C++ RL +A   + ++K   ++   F+Y+ +++ +   G            
Sbjct: 612 TYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRM 671

Query: 487 --------------------------------------NVDEANV-----------IVAE 497
                                                 +VD AN+           +  +
Sbjct: 672 FDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEK 731

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M E+ C P+  T++ LI G C    +  A  +FN M   G +P +   NSL+S   K GM
Sbjct: 732 MVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGM 791

Query: 558 PNEAFRIMQRASEDQNL-QLPSWKKAV 583
             EA R++    E  +L  L S+K  V
Sbjct: 792 HEEALRLLDSMMEYNHLAHLESYKLLV 818



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 197/433 (45%), Gaps = 27/433 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+  + DS   +   M  DG +P+      F+    + GK + A  +    
Sbjct: 437 TYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESL 496

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      + F+Y +L++   K     +A  +FK        P++ TFN+L+ GL + G+V
Sbjct: 497 KEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKV 556

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A      MG F   P + TY  LI  + R ++  R +  L ++   S   P+VVTYT+
Sbjct: 557 EDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM-ISSGCQPNVVTYTA 615

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I  YC+ G++ +A  +  ++   GI   +  ++VL++ +G +G + SA  +  RM   G
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG 675

Query: 398 YLPDVVTFSSLI-----DGYCRNG---QLNQG------------------LKLCDEMKGK 431
             P   T+S L+     + Y + G    LN                      L ++M  +
Sbjct: 676 CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQ 735

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              PNV T++ LI  LCK   L+ A R    +K + + P   ++N ++   CK G  +EA
Sbjct: 736 GCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEA 795

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++  M E        ++ +L+ G   +G   +A  IF  +L  G   D++    L+  
Sbjct: 796 LRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDG 855

Query: 552 LLKGGMPNEAFRI 564
           L++ G  +E  ++
Sbjct: 856 LVRKGYVDECSQL 868



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 27/319 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TY +++  +      D   +  D M S G  PN      F+ +  R G+   A+ ++
Sbjct: 574 TVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMV 633

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS-- 272
            + +   + + +F+Y+ L+NA       D A  +    F    +P   T++IL++ L   
Sbjct: 634 VKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFE 693

Query: 273 ------------------------RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                                   +I + +     F  M   GC P++ TY+ LI GLC+
Sbjct: 694 KYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCK 753

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
           V  ++    L   +K +S  SP    + S++S  CKLG  ++A  + + M          
Sbjct: 754 VEHLSLAFRLFNHMK-ESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLE 812

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           ++ +L+ G  + GN   AE +   +LS GY  D V +  L+DG  R G +++  +L D M
Sbjct: 813 SYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIM 872

Query: 429 KGKNLSPNVYTFTILINAL 447
           +      +  T T+L   L
Sbjct: 873 EKTGCRLHSDTHTMLSQEL 891


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 203/455 (44%), Gaps = 6/455 (1%)

Query: 122 SPLN--SLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF 179
           SPL   +L    RL  P L  + L   R    +  S +  N V+ +L         Q   
Sbjct: 135 SPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSR-SPSTLPQASL 193

Query: 180 DYMRSDGHL---PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
           D  RS   L   PN       V +    G    A   LS  +   ++     YN+LLNA 
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            ++    EA  +     R    P   T+N L+   +R+G +K+A +    M ++G  PD+
Sbjct: 254 CRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            TYN L  GLC+  +V     L  E++  S   PDVVTY +++    K      A  +  
Sbjct: 314 RTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLE 373

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EM   G+KP+ VT N+++    K G +  A    E++   G  PDV+T+++LID YC+ G
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG 433

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            + +   L DEM GK L  + +T   ++  LCK  R  DA   L        VP    Y 
Sbjct: 434 NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYG 493

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            V+  + K  N + A  +  +M E++  P   T+  LI G C   R+ EAI   N+++  
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEK 553

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G  PD+ T N +I    K G    AFR   +  E+
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN 588



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 210/447 (46%), Gaps = 37/447 (8%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S + L L+ +  T+NL++ + C  G           M+  G  P++      +++  R G
Sbjct: 198 SLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKG 257

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
               A+ LL++ +   +  +   YN+L++A  +     +A  + +       +PD  T+N
Sbjct: 258 MLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYN 317

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCS-PDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +L  GL + G+V +AF    +M     + PD+VTYNTL+    +    +    LL+E++ 
Sbjct: 318 VLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD 377

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    P +VT+  V+   CK GK+++A G   ++   G+ P  +T+N LID + K GN+ 
Sbjct: 378 KG-VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA 436

Query: 385 SAEYMRERML-----------------------------------SFGYLPDVVTFSSLI 409
            A  + + M+                                     G++PD V++ +++
Sbjct: 437 KAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVM 496

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
             Y +       L+L D+M  + L P++ T+  LI  LC+  RL +A   L +L    LV
Sbjct: 497 AAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLV 556

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +I  +CK G+++ A     +M E   KPD VT   L+ G C+ G++ +A+ +
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGG 556
           F   +  G   D IT N+LI  + K G
Sbjct: 617 FESWVEKGKKVDVITYNTLIQSMCKVG 643



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 200/423 (47%), Gaps = 12/423 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL---- 213
           TYN ++ +   +G       V + M + G  P+            +AGK D A  L    
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM 339

Query: 214 --LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             LS   P  VT     YN+L++A  K   + +A+ + +E      +P   T NI+++ L
Sbjct: 340 ERLSTALPDVVT-----YNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSL 394

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G++++A      +   G +PD++TYNTLI   C+   VA+   L+ E+  K     D
Sbjct: 395 CKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG-LKMD 453

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
             T  +V+   CK+ + + A  + +     G  P  V++  ++  + K  N   A  + +
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M+    +P + T+++LI G CR  +L + +   +E+  K L P+  T+ I+I+A CKE 
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEG 573

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L +A RF  ++  N   P     N +++G C  G +D+A  +     EK  K D +T+ 
Sbjct: 574 DLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYN 633

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI   C  G +  A+  F+ M   G  PD  T N ++S L + G   EA  ++ + ++ 
Sbjct: 634 TLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADS 693

Query: 572 QNL 574
             L
Sbjct: 694 GKL 696



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 207/470 (44%), Gaps = 71/470 (15%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYM-RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            +TYN++   LC+ G  D    + D M R    LP+       V +C +      A  LL
Sbjct: 313 LRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + R   V  +   +N ++ +L K+   +EA+   ++       PD  T+N LI    + 
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK----------EVKF 324
           G V KAF    +M   G   D  T NT++  LC++       ELL           EV +
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 325 KS-------EFSPD-----------------VVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            +       E++P+                 + TY ++I G C++ ++ +A    NE+  
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVE 552

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+ P   T+N++I  + K G++ +A     +M+   + PDVVT ++L++G C +G+L++
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            LKL +    K    +V T+  LI ++CK   ++ A  F   ++   L P  F YN V+ 
Sbjct: 613 ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672

Query: 481 GFCKAGNVDEANVIV-------------------------AEMEEKRCKPDKV------- 508
              +AG  +EA+ ++                         A+++E   KP+         
Sbjct: 673 ALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQD 732

Query: 509 ----TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
               T+   + G C  G++ EA ++ ++M++ G   D  T  +L+  L+K
Sbjct: 733 NALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 142/331 (42%), Gaps = 37/331 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N V+ +LC+M  ++  + +       G +P+       +++  +    + A  L  Q 
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++  S   YN+L+  L +     EA+    E       PD  T+NI+I    + G++
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF F   M      PD+VT NTL++GLC   ++ +  +L +    K +   DV+TY +
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK-KVDVITYNT 634

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK+G +D A   +++M   G++P A T+NV++    + G    A  M  ++   G
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694

Query: 398 YL-------------------------PD-----------VVTFSSLIDGYCRNGQLNQG 421
            L                         P+           + T+   ++G C  GQL + 
Sbjct: 695 KLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEA 754

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENR 452
             + DEM  K +  +  T+  L+  L K  +
Sbjct: 755 KAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 216/420 (51%), Gaps = 7/420 (1%)

Query: 139 GLKFLEF---SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           GL+F ++   S +N++++ +  ++NLV+++LC++   D    VF  M     LP+     
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC 226

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +    +  + D A  LL + +    + S  +YN L++ L K+ +      +    F  
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P+  T+N LI GL   G++ KA      M S  C P+ VTY TLI+GL +       
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             LL  ++ +  +  +   Y+ +ISG  K GK ++A  ++ +M   G KP+ V ++VL+D
Sbjct: 347 VRLLSSMEERG-YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  + G    A+ +  RM++ G LP+  T+SSL+ G+ + G   + +++  EM     S 
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           N + +++LI+ LC   R+ +A     ++    + P    Y+ +I G C  G++D A  + 
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525

Query: 496 AEM---EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            EM   EE + +PD VT+ IL+ G CM+  +  A+ + N ML  GC PD IT N+ ++ L
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 177/336 (52%), Gaps = 1/336 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N ++ AL K    D A+ +F+        PD +T+  L+ GL +   + +A     +M 
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           S GCSP  V YN LI GLC+  ++ R  +L+  +  K    P+ VTY ++I G C  GK+
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG-CVPNEVTYNTLIHGLCLKGKL 308

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           DKA  +   M S    P+ VT+  LI+G  K      A  +   M   GY  +   +S L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G  + G+  + + L  +M  K   PN+  +++L++ LC+E + N+A+  L ++  +  
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P  + Y+ ++ GF K G  +EA  +  EM++  C  +K  +++LI G C  GR+ EA+ 
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +++KML IG  PD +  +S+I  L   G  + A ++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 197/381 (51%), Gaps = 10/381 (2%)

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           S MIE + +S    G  D+ + LLS+ R     +    +  +  A  K +  D+AV +F 
Sbjct: 81  SSMIESYANS----GDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFH 136

Query: 251 EYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFF-YDMGS---FGCSPDIVTYNTLISG 305
                +  +    +FN ++  +   G   +  EF+ Y + S      SP+ +++N +I  
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKA 196

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           LC++  V R  E+ + +  + +  PD  TY +++ G CK  ++D+A  + +EM S G  P
Sbjct: 197 LCKLRFVDRAIEVFRGMP-ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           S V +NVLIDG  K G++     + + M   G +P+ VT+++LI G C  G+L++ + L 
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           + M      PN  T+  LIN L K+ R  DA R L  ++         +Y+ +I G  K 
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G  +EA  +  +M EK CKP+ V +++L+ G C +G+  EA  I N+M+  GC P+  T 
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435

Query: 546 NSLISCLLKGGMPNEAFRIMQ 566
           +SL+    K G+  EA ++ +
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWK 456



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 171/408 (41%), Gaps = 55/408 (13%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++  LC+ G    V  + D M   G +PN       +      GK D A  LL +  
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +   +   Y +L+N LVKQ  A +AV +           +   +++LI GL + G+ +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A   +  M   GC P+IV Y+ L+ GLCR  +     E+L  +   S   P+  TY+S+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-IASGCLPNAYTYSSL 438

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G+ K G  ++A  ++ EM+  G   +   ++VLIDG   VG +  A  +  +ML+ G 
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498

Query: 399 --------------------------------------LPDVVTFSSLIDGYCRNGQLNQ 420
                                                  PDVVT++ L+DG C    +++
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALC-KENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            + L + M  +   P+V T    +N L  K N  +  R FL++L               +
Sbjct: 559 AVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL---------------V 603

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
               K   V  A  IV  M  K   P   T+ +++   C   ++  AI
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 4/309 (1%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +F ++ +   +     KA + F+ M   F C   + ++N++++ +       RG E    
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 322 V---KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           V         SP+ +++  VI   CKL  +D+A  ++  M      P   T+  L+DG  
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   +  A  + + M S G  P  V ++ LIDG C+ G L +  KL D M  K   PN  
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  LI+ LC + +L+ A   L+++  +  +P    Y  +I+G  K     +A  +++ M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           EE+    ++  +++LI G   +G+  EA+S++ KM   GC P+ +  + L+  L + G P
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413

Query: 559 NEAFRIMQR 567
           NEA  I+ R
Sbjct: 414 NEAKEILNR 422



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 150/298 (50%), Gaps = 8/298 (2%)

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K F+    MGSF       T +++I       +     +LL  ++ ++    +  ++  
Sbjct: 61  EKMFKSAPKMGSFKLGDS--TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIER-SFIV 117

Query: 338 VISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVG----NMVSAEYMRER 392
           V   Y K    DKA  +++ M +    K S  +FN +++     G     +   +Y+   
Sbjct: 118 VFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS 177

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
            ++    P+ ++F+ +I   C+   +++ +++   M  +   P+ YT+  L++ LCKE R
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER 237

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A   L +++     P P +YN +IDG CK G++     +V  M  K C P++VT+  
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G C+KG++ +A+S+  +M+   C P+D+T  +LI+ L+K     +A R++    E
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 213/410 (51%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  + + LC  G      +  D + + G   +       +    + G+  AA  LL + 
Sbjct: 157 TFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  MYN++++++ K    +EA  +F E       PD  T++ LI G   +G++
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A + F  M      PD+ T+N L++  C+  ++  G  +  ++  K    P+ VTY S
Sbjct: 277 KDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF-DMMMKQGIKPNFVTYNS 335

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC + +++KA  I+N M   G+ P   +++++I+GF K+     A  + + M    
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PDVVT+SSLIDG  ++G+++  L+L D+M  + + PN+ T+  +++ALCK ++++ A 
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L + K     P    Y+ +I G C++G +++A  +  ++  K    D   +TI+I G 
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C++G   EA+++ +KM   GC PD  T   +I  L K    + A ++++ 
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 219/419 (52%), Gaps = 15/419 (3%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ--- 216
           N+++   C++GL      VF  +   G++P++  I F   + +  G C   KG + Q   
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDT--ITF---TTLSKGLC--LKGQIQQAFL 176

Query: 217 FRPGEVTM----STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           F    V +        Y +L++ L K      A+ + +       QP+   +N +I  + 
Sbjct: 177 FHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMC 236

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           ++  V +AF+ F +M S G SPD+VTY+ LISG C + ++    +L  ++  ++   PDV
Sbjct: 237 KVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN-IKPDV 295

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +++ +CK GKM +   +++ M   GIKP+ VT+N L+DG+  V  +  A+ +   
Sbjct: 296 YTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PD+ ++S +I+G+C+  + ++ + L  EM  KN+ P+V T++ LI+ L K  R
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++ A + + Q+    + P    YN ++D  CK   VD+A  ++ + ++K  +PD  T++I
Sbjct: 416 ISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           LI G C  G++ +A  +F  +L  G   D      +I      G+ NEA  ++ +  ++
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDN 534



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 204/408 (50%), Gaps = 1/408 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++ SL +   + +V  +   M   G  PN       ++   + G    A  + ++  
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                  T  + +L   L  +    +A     +   L    D  ++  LI GL ++GE +
Sbjct: 148 KMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A +    +      P++V YNT+I  +C+V  V    +L  E+  K   SPDVVTY+++
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKG-ISPDVVTYSAL 266

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ISG+C LGK+  A  ++N+M    IKP   TFN+L++ F K G M   + + + M+  G 
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+ VT++SL+DGYC   ++N+   + + M    ++P++ +++I+IN  CK  + ++A  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K++   +++P    Y+ +IDG  K+G +  A  +V +M ++   P+  T+  ++   C
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALC 446

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              ++ +AI++  K    G  PD  T + LI  L + G   +A ++ +
Sbjct: 447 KTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFE 494



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 187/363 (51%), Gaps = 1/363 (0%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  L ++      T   F +N +L +LVK  +    +Y+ ++      +P+    NIL
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I    ++G +  AF  F  +   G  PD +T+ TL  GLC   ++ +   L  +      
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAF-LFHDKVVALG 185

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F  D ++Y ++I G CK+G+   A  +   ++   ++P+ V +N +ID   KV  +  A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M+S G  PDVVT+S+LI G+C  G+L   + L ++M  +N+ P+VYTF IL+NA 
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK+ ++ + +     +    + P    YN ++DG+C    V++A  I   M +    PD 
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +++I+I G C   +  EA+++F +M R    PD +T +SLI  L K G  + A +++ +
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 568 ASE 570
             +
Sbjct: 426 MHD 428



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 166/340 (48%), Gaps = 1/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ S+C++ L +    +F  M S G  P+       +S     GK   A  L ++  
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    + +N L+NA  K     E   +F    +   +P+  T+N L+ G   + EV 
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA   F  M   G +PDI +Y+ +I+G C++ +      L KE+  +    PDVVTY+S+
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH-RKNIIPDVVTYSSL 406

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G  K G++  A  + ++M+  G+ P+  T+N ++D   K   +  A  +  +    G+
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGF 466

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD+ T+S LI G C++G+L    K+ +++  K  + +VY +TI+I   C E   N+A  
Sbjct: 467 QPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALA 526

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            L +++ N  +P    Y  +I    K    D A  ++ EM
Sbjct: 527 LLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 152/307 (49%), Gaps = 3/307 (0%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY+ ++   C +G L D++ + F+ M  +   P+       V++  + GK    K +   
Sbjct: 262 TYSALISGFCILGKLKDAIDL-FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDM 320

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  +   YNSL++        ++A  +F    +    PD  +++I+I G  +I +
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A   F +M      PD+VTY++LI GL +   ++   +L+ ++  +    P++ TY 
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG-VPPNICTYN 439

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++   CK  ++DKA  +  +    G +P   T+++LI G  + G +  A  + E +L  
Sbjct: 440 SILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVK 499

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           GY  DV  ++ +I G+C  G  N+ L L  +M+     P+  T+ I+I +L K++  + A
Sbjct: 500 GYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559

Query: 457 RRFLKQL 463
            + L+++
Sbjct: 560 EKLLREM 566



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 1/281 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++ + C+ G     + VFD M   G  PN       +       + + AK + +  
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G V      Y+ ++N   K    DEA+ +FKE  R    PD  T++ LI GLS+ G +
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   G  P+I TYN+++  LC+ ++V +   LL + K K  F PD+ TY+ 
Sbjct: 417 SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG-FQPDISTYSI 475

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C+ GK++ A  ++ ++   G       + ++I GF   G    A  +  +M   G
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
            +PD  T+  +I    +  + +   KL  EM  + L  N Y
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 35/264 (13%)

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           ++Y+S  + +     +D A  ++N +      P A  FN ++    K  +  +  Y+ ++
Sbjct: 51  ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQK 110

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL--------- 443
           M   G  P++V  + LI+ +C+ G +     +  ++      P+  TFT L         
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170

Query: 444 --------------------------INALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
                                     I+ LCK      A   L+++  N + P   MYN 
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +ID  CK   V+EA  + +EM  K   PD VT++ LI G C+ G++ +AI +FNKM+   
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290

Query: 538 CAPDDITVNSLISCLLKGGMPNEA 561
             PD  T N L++   K G   E 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEG 314



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 1/212 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N   ++Y++++   C++   D    +F  M     +P+       +    ++G+   A 
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L+ Q     V  +   YNS+L+AL K +  D+A+ +  ++     QPD  T++ILI+GL
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G+++ A + F D+   G + D+  Y  +I G C          LL +++  +   PD
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKME-DNGCIPD 539

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             TY  +I    K  + D A  +  EM + G+
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 93/189 (49%), Gaps = 8/189 (4%)

Query: 396 FGYLP------DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           F ++P      + +++SS    +  N  ++  + L + +  +N +P  + F  ++ +L K
Sbjct: 38  FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               +      +++++  + P     N +I+ FC+ G +  A  + A++ +    PD +T
Sbjct: 98  SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           FT L  G C+KG++ +A    +K++ +G   D I+  +LI  L K G    A  ++QR  
Sbjct: 158 FTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV- 216

Query: 570 EDQNLQLPS 578
            D NL  P+
Sbjct: 217 -DGNLVQPN 224


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 219/421 (52%), Gaps = 7/421 (1%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLV-----MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K LE  +V   +    K  N+V     M+  C+ G  DS   +FD M  +G  PN+    
Sbjct: 309 KMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYA 368

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +  C + G  D A  + +Q +  +++ + F  NSL+   +K  + +EA  +F E    
Sbjct: 369 VIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVAC 428

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
               + +T+N L+  L + G++ +A   +  M   G  P +V+YN +I G C+  ++   
Sbjct: 429 -GIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSA 487

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           + +  E+  +    P+++TY+ ++ GY K G  + A G+Y+ M    I PS  T N++I+
Sbjct: 488 NGVFVEM-LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIIN 546

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  K G    ++   ++++  G++P  +T++ +IDG+ + G +N  L +  EM    +SP
Sbjct: 547 GLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSP 606

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV+T+T LIN  CK N ++ A + + ++K   +     +Y  +IDGFC+ G++  A+ ++
Sbjct: 607 NVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLL 666

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           +E++E    P+KV ++ +I G      M  A+ +  +M+  G   D     +LIS LLK 
Sbjct: 667 SELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKE 726

Query: 556 G 556
           G
Sbjct: 727 G 727



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 190/374 (50%), Gaps = 1/374 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  +YN ++   C+ G  DS   VF  M   G  PN       +    + G  + A GL 
Sbjct: 467 SVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLY 526

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + R   +  S F  N ++N L K     E+    K+  +    P   T+N +I G  + 
Sbjct: 527 DRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE 586

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A   + +M   G SP++ TY  LI+G C+ N +    +++ E+K K     DV  
Sbjct: 587 GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG-IELDVTV 645

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+C+ G M  A+ + +E+   G+ P+ V ++ +I GF K+ NM +A ++ +RM+
Sbjct: 646 YCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMI 705

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           + G   D+  +++LI G  + G+L    +L  EM  K + P++ T+++LI+ LC + +L 
Sbjct: 706 NEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLE 765

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A++ L+ +    + P  F+YN +I G  K GN+ EA  +  EM +K   PD  T+ IL+
Sbjct: 766 NAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILV 825

Query: 515 IGHCMKGRMVEAIS 528
            G    G +    S
Sbjct: 826 NGKVKDGNLFSGAS 839



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 210/418 (50%), Gaps = 10/418 (2%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA---KG- 212
           + Y++V+ ++C+     +   +   MR  G +P+  +    +  C++ GK   A   KG 
Sbjct: 260 RAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGE 319

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +LS  +P  V ++T    +L+    KQ + D A+ +F +       P+  T+ ++I+   
Sbjct: 320 MLSCGKPMNVVVAT----TLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCC 375

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G + KA+E +  M +   SP +   N+LI G  +        +L  E         +V
Sbjct: 376 KNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG--IANV 433

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY S++S  CK GKM +A  I+ +M   G++PS V++N +I G  + G+M SA  +   
Sbjct: 434 FTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVE 493

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML  G  P+++T+S L+DGY + G       L D M+G+N++P+ +T  I+IN LCK  R
Sbjct: 494 MLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            ++++  LK+L     +P    YN +IDGF K G+V+ A  +  EM +    P+  T+T 
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G C    M  A+ + ++M   G   D     +LI    + G    A +++    E
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQE 671



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 193/402 (48%), Gaps = 7/402 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G       +++ M   G  P+       +    + G  D+A G+  + 
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRI 274
               +  +   Y+ L++   K+ + +   Y F  Y R+  +   P  +T NI+I GL + 
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTE---YAFGLYDRMRGENIAPSDFTCNIIINGLCKA 551

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G   ++ +    +   G  P  +TYN +I G  +   V     +  E+  K   SP+V T
Sbjct: 552 GRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEM-CKIGVSPNVFT 610

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I+G+CK   MD A  + +EM + GI+     +  LIDGF + G+MV+A  +   + 
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+ V +SS+I G+ +   +   L L   M  + +  ++  +T LI+ L KE +L 
Sbjct: 671 EVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLL 730

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A     ++    ++P    Y+ +I G C  G ++ A  I+ +M+ K   P    +  LI
Sbjct: 731 FASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI 790

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            GH  +G + EA  + N+ML  G  PDD T + L++  +K G
Sbjct: 791 TGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 230/479 (48%), Gaps = 32/479 (6%)

Query: 96  VKVVCTLLLRSSYLSDTCA-------RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRV 148
           V  +C LL   +  ++TC        R+  +   P+ S+ V+ RL      L F   SRV
Sbjct: 98  VDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSV-VVARLIESSRRLDFESDSRV 156

Query: 149 -NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
            N  LN   KT  +          +D+V   F+ +     +P   ++  F+S  ++    
Sbjct: 157 FNYLLNSYVKTKRI----------NDAVDC-FNSLIEKDIVPCLTVMNIFLSELVKNNMI 205

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A+ + ++     V       + ++ A +++   +EA   F+E      + D   ++I+
Sbjct: 206 REARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIV 265

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+ + +  +   A     +M   G  P  V +  +I G+C      +  ++L+ VK K E
Sbjct: 266 IEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVC-----MKQGKMLEAVKVKGE 319

Query: 328 FSP-----DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                   +VV  T+++ GYCK G +D A  ++++MN  GI P+ VT+ V+I+   K GN
Sbjct: 320 MLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  A  +  +M +    P V   +SLI GY +     +  KL DE     ++ NV+T+  
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNS 438

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L++ LCKE ++++A    +++    + P    YN +I G C+ G++D AN +  EM EK 
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            KP+ +T+++L+ G+  KG    A  ++++M     AP D T N +I+ L K G  +E+
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSES 557



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 115/285 (40%), Gaps = 35/285 (12%)

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E   + +F  D   +  +++ Y K  +++ A   +N +    I P     N+ +    
Sbjct: 141 LIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELV 200

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   +  A  +  +M S G   D  T S +I    R G+L +      E K K +  +  
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI------------------- 479
            ++I+I A+CK+     A   L++++    VP   ++  VI                   
Sbjct: 261 AYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320

Query: 480 ----------------DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                            G+CK G++D A  +  +M E    P+ VT+ ++I   C  G M
Sbjct: 321 LSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNM 380

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            +A  I+N+M     +P    VNSLI   LK   P EA ++   A
Sbjct: 381 DKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEA 425



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 2/203 (0%)

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           FN L++ + K   +  A      ++    +P +   +  +    +N  + +   + ++M 
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K +  +  T +++I A  +E +L +A  + ++ K   +      Y+ VI+  CK  +  
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMK-GRMVEAISIFNKMLRIGCAPDDITVNSL 548
            A  ++ EM +K   P +V FT  +IG CMK G+M+EA+ +  +ML  G   + +   +L
Sbjct: 277 AALGLLREMRDKGWVPHEVIFT-RVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335

Query: 549 ISCLLKGGMPNEAFRIMQRASED 571
           +    K G  + A  +  + +E+
Sbjct: 336 MKGYCKQGDLDSALELFDKMNEN 358


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 187/346 (54%), Gaps = 1/346 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           ++   + Y++L+ A  K  + + A  + +E        +  T+N LI GL R G +++AF
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
            +  +M  +G  PD  TY  +I+GLC+     +   LL E+       P+VV Y+++I G
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAG-LMPNVVVYSTLIDG 357

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           + + G  D+A  I  EM++ G++P+ +T++ LI G  K+G M  A  + ++M   GY+ D
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            +T++ +I+G+ R     +   L +EM+   +SPNVYT++I+IN LC+      A   L+
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q+  + L P  F+Y P+I G+C+ G+   A   + +M  +   PD   +  LIIG    G
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +M EAI  +++ML  G  P+D T   LI      G   +A +++ +
Sbjct: 538 KMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQ 583



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 217/430 (50%), Gaps = 9/430 (2%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSS 200
           E      SLN    TYN ++  LC  G   +++  F Y   M   G +P+       ++ 
Sbjct: 268 EMRETGCSLN--VVTYNTLIGGLCRAG---AIEEAFGYKKEMEDYGLVPDGFTYGAIING 322

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             + G+ D AK LL +     +  +  +Y++L++  ++Q NADEA  + KE      QP+
Sbjct: 323 LCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPN 382

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T++ LI+GL ++G + +A      M   G   D +TYN +I G  R +       LL 
Sbjct: 383 KITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLN 442

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E++ K   SP+V TY+ +I+G C++G+ ++A+G+  +M + G+KP+A  +  LI G+ + 
Sbjct: 443 EMR-KGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCRE 501

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G+   A    ++M      PD+  ++SLI G    G++++ ++  DEM  K   PN +T+
Sbjct: 502 GSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTY 561

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI+       L  A + L Q+  + L P  F+Y  +++G+ K+ N+++ +  +  M E
Sbjct: 562 GGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLE 621

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K   PD   + I+I      G M  A+S+ + + + G  PD +   SLIS   K     +
Sbjct: 622 KGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEK 681

Query: 561 AFRIMQRASE 570
           A  ++   ++
Sbjct: 682 AVGLLDEMAK 691



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 202/434 (46%), Gaps = 36/434 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+ G  D  + + D M   G +PN  +    +   +R G  D A  ++ + 
Sbjct: 315 TYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEM 374

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y++L+  L K      A  + K+  ++    DT T+N++I+G  R    
Sbjct: 375 SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNK 434

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++AF    +M   G SP++ TY+ +I+GLC++ E  R   LL+++       P+   Y  
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM-IADGLKPNAFVYAP 493

Query: 338 VISGYCK-----------------------------------LGKMDKATGIYNEMNSCG 362
           +ISGYC+                                   +GKMD+A   Y+EM   G
Sbjct: 494 LISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +P+  T+  LI G+   GN+  AE +  +ML+ G  P+   ++ +++GY ++  L +  
Sbjct: 554 FQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVS 613

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                M  K L P+   + I+I+ L     +  A   L  ++ N LVP   +Y  +I GF
Sbjct: 614 STLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGF 673

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CKA ++++A  ++ EM +K  +P    +  LI G C    +  A +IFN ++  G  P+ 
Sbjct: 674 CKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNC 733

Query: 543 ITVNSLISCLLKGG 556
           +T  +LI    K G
Sbjct: 734 VTYTTLIDGYCKAG 747



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 183/377 (48%), Gaps = 1/377 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           V  +M   G  P+       + +  +    ++AK ++ + R    +++   YN+L+  L 
Sbjct: 230 VRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLC 289

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           +    +EA    KE       PD +T+  +I GL + G   +A     +M   G  P++V
Sbjct: 290 RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            Y+TLI G  R        +++KE+   +   P+ +TY ++I G CKLG+M +A+ I  +
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMS-AAGVQPNKITYDNLIRGLCKLGRMGRASRILKQ 408

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G     +T+N++I+G  +  N   A  +   M   G  P+V T+S +I+G C+ G+
Sbjct: 409 MTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGE 468

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
             +   L ++M    L PN + +  LI+  C+E   + A   LK++   +L P  + YN 
Sbjct: 469 SERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNS 528

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I G    G +DEA     EM EK  +P+  T+  LI G+ M G + +A  + ++ML  G
Sbjct: 529 LIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSG 588

Query: 538 CAPDDITVNSLISCLLK 554
             P+D     ++    K
Sbjct: 589 LNPNDFIYAQILEGYFK 605



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 190/409 (46%), Gaps = 2/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNLV+         +   ++ + MR  G  PN       ++   + G+ + A GLL Q 
Sbjct: 420 TYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQM 479

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + F+Y  L++   ++ +   A    K+  R    PD + +N LI GLS +G++
Sbjct: 480 IADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKM 539

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E++ +M   G  P+  TY  LI G      + +  +LL ++   S  +P+   Y  
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM-LNSGLNPNDFIYAQ 598

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY K   ++K +     M   G+ P    + ++I      G+M +A  +   +   G
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD + + SLI G+C+   + + + L DEM  K + P +  +  LI+  CK + ++ AR
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +    L P    Y  +IDG+CKAG++ +A  +  EM  +   PD   +++L  G 
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGC 778

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              G + +A+ I  +M+  G A    + N+L+    K G   E  + + 
Sbjct: 779 SNSGDLQQALFITEEMIARGYAIIS-SFNTLVHGFCKRGKLQETVKFLH 826



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 226/482 (46%), Gaps = 33/482 (6%)

Query: 99  VCTLLLRSS--YLSDTCARYLCEKLSPLNSLEVIKRLD-----NPKLGLKFLEFSRVNLS 151
           V TLL R +  +     A  +  +LSP     +++R +     +PKL L F  +SR  L+
Sbjct: 55  VATLLSRCTGDWKQVIAASDIPSRLSPAALSSLLRRCNSSPRLHPKLLLDFFYWSRTRLA 114

Query: 152 LNH-SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            +  +   +  +  SLC  GL+     + D M      P  P++   +SS  RA      
Sbjct: 115 PSAPAPDAFAHLAVSLCAAGLYPQANGLLDQMIR--AYPTPPLV---LSSVHRA-----L 164

Query: 211 KGLLSQFRPG--EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            G     RP   +V + T+          +  +  E V + K+   L   P     N L+
Sbjct: 165 SGSDQGRRPVVLDVLVDTYKKTG------RVRDGAEVVLLMKD---LGLAPSLRCCNGLL 215

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           + L R   +   ++    M   G SPD+ TY+TLI   C+V ++    ++++E++ ++  
Sbjct: 216 KDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMR-ETGC 274

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           S +VVTY ++I G C+ G +++A G   EM   G+ P   T+  +I+G  K G    A+ 
Sbjct: 275 SLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKC 334

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G +P+VV +S+LIDG+ R G  ++  K+  EM    + PN  T+  LI  LC
Sbjct: 335 LLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLC 394

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+  A R LKQ+     +     YN VI+G  +  N +EA +++ EM +    P+  
Sbjct: 395 KLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVY 454

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIM 565
           T++I+I G C  G    A  +  +M+  G  P+      LIS   + G   +  E  + M
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514

Query: 566 QR 567
            R
Sbjct: 515 TR 516



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 202/475 (42%), Gaps = 84/475 (17%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC++G  +    + + M +DG  PN+ +    +S   R G    A   L + 
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T   + YNSL+  L      DEA+  + E      QP+ +T+  LI G S  G +
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNL 574

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE---------------- 321
           +KA +  + M + G +P+   Y  ++ G  + + + +    LK                 
Sbjct: 575 EKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIV 634

Query: 322 ------------------VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                             V  K+   PD + Y S+ISG+CK   M+KA G+ +EM   GI
Sbjct: 635 IHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGI 694

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P    +N LIDGF K  ++  A  +   ++  G  P+ VT+++LIDGYC+ G +   + 
Sbjct: 695 EPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAID 754

Query: 424 LCDEMKGKNLSPNVYTFTIL----------------------------------INALCK 449
           L +EM  + ++P+ + +++L                                  ++  CK
Sbjct: 755 LYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCK 814

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             +L +  +FL  +   D+VP       ++ G  +AG + EA+ I  E+++K        
Sbjct: 815 RGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTD 874

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
                             S+F  M+  G  P D+ ++++I    K G  ++A  +
Sbjct: 875 ---------------HLSSLFTDMINQGLVPLDV-IHNMIQSHCKQGYLDKALML 913



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/223 (19%), Positives = 92/223 (41%), Gaps = 21/223 (9%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+       + +F+ +   G  PN       +    +AG    A  L ++  
Sbjct: 701 YNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEML 760

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGEV 277
              V    F+Y+ L        +  +A+++ +E   R Y+     +FN L+ G  + G++
Sbjct: 761 TEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI--ISSFNTLVHGFCKRGKL 818

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++  +F + M      P ++T   ++ GL    +++  H +  E++ K+    D    +S
Sbjct: 819 QETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSS 878

Query: 338 V------------------ISGYCKLGKMDKATGIYNEMNSCG 362
           +                  I  +CK G +DKA  +++ + + G
Sbjct: 879 LFTDMINQGLVPLDVIHNMIQSHCKQGYLDKALMLHDALVAKG 921


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N ++   C+ GL D    V D M + G  P +     ++ +    G+ D A+ LLS  
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V      YN+L++  +K     EA  +F +       P   T+N LI GL   G +
Sbjct: 370 AAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A     +M +    PD++TY TL+ G  +   ++   E+  E+  +    PD   YT+
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM-LRKGIKPDGYAYTT 484

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIK-PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
              G  +LG  DKA  ++ EM +     P    +NV IDG  KVGN+V A   + ++   
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD VT++++I GY  NGQ      L DEM  K L P+V T+ +LI    K  RL  A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            ++  ++K   + P    +N ++ G CKAGN+DEA   + +MEE+   P+K ++T+LI  
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +C   +  E + ++ +ML     PD  T  +L   L K
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 218/481 (45%), Gaps = 55/481 (11%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +  N+V++ L +  + +    V++ M   G +P        + SC +AG  +    + 
Sbjct: 202 SVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIW 261

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +   +  S   YN L+N   K    +EA     +  R       ++FN LI+G  + 
Sbjct: 262 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ 321

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G    A+    +M + G  P   TYN  I  LC    +    ELL  +      +PDVV+
Sbjct: 322 GLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA-----APDVVS 376

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +++ GY K+GK  +A+ +++++ +  I PS VT+N LIDG  + GN+  A+ ++E M 
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT------------- 441
           +    PDV+T+++L+ G+ +NG L+   ++ DEM  K + P+ Y +T             
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496

Query: 442 -----------------------ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
                                  + I+ LCK   L  A  F +++    LVP    Y  V
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I G+ + G    A  +  EM  KR  P  +T+ +LI GH   GR+ +A     +M + G 
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED--------------QNLQLPSWKKAVP 584
            P+ +T N+L+  + K G  +EA+R + +  E+              +N     W++ V 
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVK 676

Query: 585 L 585
           L
Sbjct: 677 L 677



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 174/387 (44%), Gaps = 5/387 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +N  +  +  TYN+ + +LC+ G  D  + +   M +    P+       +   I+ GK 
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKF 390

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  L    R G++  S   YN+L++ L +  N + A  + +E       PD  T+  L
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++G  + G +  A E + +M   G  PD   Y T   G  R+ +  +   L +E+     
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +PD+  Y   I G CK+G + KA     ++   G+ P  VT+  +I G+ + G    A 
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + ML     P V+T+  LI G+ + G+L Q  +   EMK + + PNV T   L+  +
Sbjct: 571 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK   +++A R+L +++   + P  + Y  +I   C     +E   +  EM +K  +PD 
Sbjct: 631 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKML 534
            T   L   H  K      +    ++L
Sbjct: 691 YTHRAL-FKHLEKDHESREVEFLERLL 716



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 7/331 (2%)

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K++ A++ +  F++  R    P     NI+++ L     + KA   +  M   G  P +
Sbjct: 179 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +T+NT++    +  ++ R  ++  E+K ++ EFS   VTY  +I+G+ K GKM++A   +
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE--VTYNILINGFSKNGKMEEARRFH 296

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            +M   G   +  +FN LI+G+ K G    A  + + ML+ G  P   T++  I   C  
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G+++   +L   M     +P+V ++  L++   K  +  +A      L+  D+ P    Y
Sbjct: 357 GRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +IDG C++GN++ A  +  EM  +   PD +T+T L+ G    G +  A  ++++MLR
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G  PD     +     L+ G  ++AFR+ +
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 4/220 (1%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           Y K    +K    + +M   G  PS    N+++        M  A  + E M+  G +P 
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V+TF++++D   + G L +  K+  EMK +N+  +  T+ ILIN   K  ++ +ARRF  
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            ++ +     P+ +NP+I+G+CK G  D+A  +  EM      P   T+ I I   C  G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           R+ +A  + + M     APD ++ N+L+   +K G   EA
Sbjct: 358 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEA 393



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 14/245 (5%)

Query: 159 YNLVMRSLCEMGLHDS---VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           Y    R++ E+ L DS    ++  + + +D H P+  +    +    + G    A     
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539

Query: 216 Q-FR----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + FR    P  VT +T +   L N   K      A  ++ E  R    P   T+ +LI G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKM-----ARNLYDEMLRKRLYPSVITYFVLIYG 594

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
            ++ G +++AF++  +M   G  P+++T+N L+ G+C+   +   +  L +++ +    P
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME-EEGIPP 653

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +  +YT +IS  C   K ++   +Y EM    I+P   T   L     K       E++ 
Sbjct: 654 NKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLE 713

Query: 391 ERMLS 395
             +LS
Sbjct: 714 RLLLS 718



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%)

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y +     + L   ++M  K   P+V    I++  L     +N A    + +  + ++P 
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +N ++D   KAG+++  + I  EM+ +  +  +VT+ ILI G    G+M EA     
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            M R G A    + N LI    K G+ ++A+ +
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGV 330


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 200/404 (49%), Gaps = 4/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN++++ LC  G  +  + +FD M S    P+       +      G+ + A  LL   
Sbjct: 264 SYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDM 320

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  +Y S++  L  +    +A+ + ++        D   +  ++ G    G++
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +F +M   G + D VTY TLI+GLCR  E+    ++L+E+        D VTYT 
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEM-LARRLDVDEVTYTV 439

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYCK GKM +A  ++N M   G+ P+ VT+  L DG  K G++ +A  +   M + G
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +  T++SLI+G C+ G L+Q ++   +M    L P+VYT+T LI+ALCK   L+ A 
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++  N + P    YN +++GFC +G V+    ++  M EK   P+  T+  L+  +
Sbjct: 560 DLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQY 619

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C+   M     I+  M      P++ T N LI    K     EA
Sbjct: 620 CIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA 663



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 194/397 (48%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++   C +G  ++   + D M + G  PN+ +    V+     G+   A  ++   
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM 355

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V +   +Y ++L+    + +   A   F E  R     D  T+  LI GL R GE+
Sbjct: 356 VHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGEL 415

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A +   +M +     D VTY  L+ G C+  ++A   ++      +   +P+VVTYT+
Sbjct: 416 KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQV-HNTMVQRGVAPNVVTYTA 474

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +  G CK G +  A  + +EM++ G++ +A T+N LI+G  K G +  A      M + G
Sbjct: 475 LSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG 534

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV T+++LID  C++G+L++   L  EM    + P + T+ +L+N  C   R+   +
Sbjct: 535 LKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGK 594

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L+ +   ++ P    YN ++  +C   N+     I   M  +  +P++ T+ ILI GH
Sbjct: 595 KLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGH 654

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           C    M EA    N+M+  G      + ++LI  L K
Sbjct: 655 CKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNK 691



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 182/380 (47%), Gaps = 3/380 (0%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           Y  V+  LC+ G + D++ VV D +     L  +         C +     A +      
Sbjct: 332 YTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQ 391

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G  T     Y +L+N L +     EA  + +E        D  T+ +L+ G  + G++
Sbjct: 392 RKGLAT-DGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+    M   G +P++VTY  L  GLC+  +V   +ELL E+  K     +  TY S
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG-LELNACTYNS 509

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK G +D+A     +M++ G+KP   T+  LID   K G +  A  + + ML  G
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P +VT++ L++G+C +G++  G KL + M  KN+ PN  T+  L+   C  N +    
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTT 629

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +   ++ P    YN +I G CKA ++ EA     EM EK  +    +++ LI   
Sbjct: 630 EIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             K + VEA  +F+ M + G
Sbjct: 690 NKKKKFVEARKLFHDMRKEG 709



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 165/333 (49%), Gaps = 8/333 (2%)

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA++ +   DEA+    E F+     +  ++NIL++ L   G V+ A + F +M S    
Sbjct: 239 NAVLSRLPLDEAI----ELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---P 291

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           PD+VTY  LI G C + E+    +LL ++  +    P+   YTSV++  C  G++  A  
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARG-VEPNATVYTSVVALLCDKGRVSDALT 350

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +  +M    +      +  ++ GF   G++VSA    + M   G   D VT+++LI+G C
Sbjct: 351 VVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLC 410

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           R G+L +  K+  EM  + L  +  T+T+L++  CK  ++ +A +    +    + P   
Sbjct: 411 RAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVV 470

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            Y  + DG CK G+V  AN ++ EM  K  + +  T+  LI G C  G + +A+     M
Sbjct: 471 TYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              G  PD  T  +LI  L K G  + A  ++Q
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQ 563



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 135/249 (54%), Gaps = 6/249 (2%)

Query: 330 PD--VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           PD  V +Y  ++   C  G+++ A  +++EM S    P  VT+ +LI G+  +G + +A 
Sbjct: 258 PDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAV 314

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M++ G  P+   ++S++   C  G+++  L + ++M    +  +   +T +++  
Sbjct: 315 KLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGF 374

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C +  L  ARR+  +++   L      Y  +I+G C+AG + EA  ++ EM  +R   D+
Sbjct: 375 CNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDE 434

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+T+L+ G+C +G+M EA  + N M++ G AP+ +T  +L   L K G    A  ++  
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 568 ASEDQNLQL 576
            S ++ L+L
Sbjct: 495 MS-NKGLEL 502



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 1/343 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC  G     + V   M +     +       V    + GK   A  + +  
Sbjct: 401 TYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTM 460

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y +L + L KQ +   A  +  E      + +  T+N LI GL + G +
Sbjct: 461 VQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 520

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     DM + G  PD+ TY TLI  LC+  E+ R H+LL+E+   +   P +VTY  
Sbjct: 521 DQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM-LDNGIKPTIVTYNV 579

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G+C  G+++    +   M    I P+A T+N L+  +    NM S   + + M S  
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+  T++ LI G+C+   + +     +EM  K       +++ LI  L K+ +  +AR
Sbjct: 640 VEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           +    ++      +P +YN  ID      N++    +  E+ E
Sbjct: 700 KLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVE 742



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 102/287 (35%), Gaps = 42/287 (14%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E S   L LN    TYN ++  LC+ G  D        M + G  P+       + +  +
Sbjct: 494 EMSNKGLELNAC--TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCK 551

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           +G+ D A  LL +     +  +   YN L+N        +    + +        P+  T
Sbjct: 552 SGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATT 611

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N L++       +K   E +  M S    P+  TYN LI                    
Sbjct: 612 YNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILI-------------------- 651

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                            G+CK   M +A   +NEM   G + +A +++ LI    K    
Sbjct: 652 ----------------KGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKF 695

Query: 384 VSAEYMRERMLSFGYL--PDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           V A  +   M   G+   PDV  F   ID       L   L LCDE+
Sbjct: 696 VEARKLFHDMRKEGFTAEPDVYNF--YIDFNFNEDNLEATLALCDEL 740


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 201/377 (53%), Gaps = 44/377 (11%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           +ST   + LL+AL     +  A  +F + FRL     T TFNI+++ L   G+  +A E 
Sbjct: 8   ISTASLHPLLSAL----PSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALEL 63

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M      P+ VTYNT+I+G C    V    ++++E++ +   +P+  TY +VISG+C
Sbjct: 64  LRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 119

Query: 344 KLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           K+G++D+A  +++EM + G +KP AV +N LI G+   G + +A   R+RM+  G    V
Sbjct: 120 KVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTV 179

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL--------N 454
            T++ L+     +G+  +  +L +EM GK L+P+V+T+ ILIN  CKE  +        N
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFEN 239

Query: 455 DARRFLK-----------------QLKWND----------LVPKPFMYNPVIDGFCKAGN 487
            +RR ++                 Q++  D          + P   +YN +I+    +GN
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +D A  I+ EME+KR  PD VT+  L+ G C+ GR+ EA  + ++M + G  PD +T N+
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 548 LISCLLKGGMPNEAFRI 564
           LIS     G   +A RI
Sbjct: 360 LISGYSMKGDVKDALRI 376



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 214/442 (48%), Gaps = 18/442 (4%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F +  R+ L L  +  T+N+++R LC  G       +   M      PN+      ++  
Sbjct: 29  FADMFRLRLPLCTT--TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGF 82

Query: 202 IRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQP 259
              G+  AA  ++ + R  G +  + + Y ++++   K    DEAV +F E   +   +P
Sbjct: 83  CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 142

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +   +N LI G    G++  A  +   M   G +  + TYN L+  L         +EL+
Sbjct: 143 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 202

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  K   +PDV TY  +I+G+CK G + KA  I+  M+  G++ + VT+  LI    K
Sbjct: 203 EEMGGKG-LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 261

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + + +  +  G  PD+V +++LI+ +  +G +++  ++  EM+ K ++P+  T
Sbjct: 262 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L+  LC   R+++AR+ + ++    + P    YN +I G+   G+V +A  I  EM 
Sbjct: 322 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 381

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K   P  +T+  LI G C  G+  +A ++  +M+  G  PDD T  SLI      G+  
Sbjct: 382 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE-----GLTT 436

Query: 560 EAFRIMQRASEDQNLQLPSWKK 581
           E     +RA +D+ L      K
Sbjct: 437 ED----ERAIDDERLAAADAAK 454


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 204/413 (49%), Gaps = 1/413 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + + YN ++ SL +  L D ++ V+  + ++   PN       V+   + G    A+   
Sbjct: 158 TLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYA 217

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +   TF Y SL+    +    D A  +F    +   Q +  ++  LI GL   
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +A + F DM    C P + TY  LI  L           L  E+K K    P+V T
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG-CEPNVHT 336

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT +I G CK  KMD+A  + +EM+  G+ PS VT+N LIDG+ K G +  A  + + M 
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S    P+  T++ LI G C+  ++++ + L ++M  + LSP++ T+  LI+  CK N L 
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A R L  +  N LVP  + Y+  ID  CK G V+EA  +   ++ K  K ++V +T LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            G+C  G++  A S+  +ML   C P+  T N LI  L K     EA  ++ +
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 210/428 (49%), Gaps = 7/428 (1%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS-PMIEFFV 198
           +K +    +N  ++ +  T+N ++   C++G     ++    +   G  P++       +
Sbjct: 178 MKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLIL 237

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
             C   G  +A +  L   + G    +   Y +L++ L +    +EA+ +F +       
Sbjct: 238 GHCRNKGVDNAYEVFLIMPQKG-CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCC 296

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P   T+ +LI  LS  G   +A   F +M   GC P++ TY  LI GLC+ N++    ++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN--EMNSCGIKPSAVTFNVLIDG 376
           L E+  K    P VVTY ++I GYCK G +D A  I +  E NSCG  P+  T+N LI G
Sbjct: 357 LSEMSEKG-LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG--PNTRTYNELICG 413

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K   +  A  +  +ML     P ++T++SLI G C+   L    +L   M    L P+
Sbjct: 414 LCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +T+++ I+ LCKE R+ +A      +K   +     +Y  +IDG+CK G +D A  ++ 
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M    C P+  T+ +LI G C + +M EA S+  KML +G  P  +T   LI  +LK G
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 557 MPNEAFRI 564
             + A ++
Sbjct: 594 AFDHALKV 601



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 233/498 (46%), Gaps = 26/498 (5%)

Query: 101 TLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY- 159
           ++L R ++      R L   L+P +   +     +P+  L F  +  +     H+  +Y 
Sbjct: 46  SILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYS 105

Query: 160 ---NLVMRSLCEMGLHDSVQV-----------------VFDYMRSDGHLPNSPMIEFFVS 199
              N+++R+   +G+ + +++                 VF  M +DG     P +  + +
Sbjct: 106 SMLNILIRARL-LGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNT 164

Query: 200 SCIRAGK---CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
             +   K    D  K +  +    +++ + + +N+++N   K  N  EA     +  +  
Sbjct: 165 ILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAG 224

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             PDT+T+  LI G  R   V  A+E F  M   GC  + V+Y  LI GLC    +    
Sbjct: 225 LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEAL 284

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +L  ++  +    P V TYT +I      G+  +A  ++NEM   G +P+  T+ VLIDG
Sbjct: 285 KLFADMT-EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDG 343

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K   M  A  M   M   G +P VVT+++LIDGYC+ G ++   ++ D M+  +  PN
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T+  LI  LCK+ +++ A   L ++    L P    YN +I G CK  +++ A  +++
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M E    PD+ T+++ I   C +GR+ EA ++F+ +   G   +++   +LI    K G
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523

Query: 557 MPNEAFRIMQRASEDQNL 574
             + A+ +++R   D  L
Sbjct: 524 KIDVAYSLLERMLNDACL 541



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 195/398 (48%), Gaps = 1/398 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TY +++ +L   G       +F+ M+  G  PN       +    +  K D A+ +L
Sbjct: 298 TVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKML 357

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +  S   YN+L++   K+   D+A  +          P+T T+N LI GL + 
Sbjct: 358 SEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK 417

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +V KA      M     SP ++TYN+LI G C+VN++   + LL  +  ++   PD  T
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN-ENGLVPDQWT 476

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+  I   CK G++++A  +++ + + G+K + V +  LIDG+ KVG +  A  + ERML
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +   LP+  T++ LI+G C+  ++ +   L  +M    + P V T+TILI  + K+   +
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A +    +      P    Y   +  +   G ++E + ++A+M E+   PD VT+T+LI
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            G+   G    A      M+  GC P    V+ LI  L
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 191/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LCE G  +    +F  M  D   P        + +   +G+   A  L ++ 
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      +   Y  L++ L K+N  DEA  M  E       P   T+N LI G  + G +
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AFE    M S  C P+  TYN LI GLC+  +V +   LL ++  + + SP ++TY S
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM-LERKLSPSLITYNS 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK+  ++ A  + + MN  G+ P   T++V ID   K G +  A  + + + + G
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + V +++LIDGYC+ G+++    L + M      PN YT+ +LI  LCKE ++ +A 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++    + P    Y  +I    K G  D A  +   M     +PD  T+T  +  +
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             +G + E   +  KM   G  PD +T   LI    + G+ + AF  ++
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 203/451 (45%), Gaps = 30/451 (6%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++   C+ G+ D    + D M S+   PN+      +    +  K   A  LL
Sbjct: 368 SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALL 427

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++    +++ S   YNSL++   K N+ + A  +          PD WT+++ I  L + 
Sbjct: 428 NKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A   F  + + G   + V Y  LI G C+V ++   + LL+ +       P+  T
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM-LNDACLPNSYT 546

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I G CK  KM +A+ +  +M + G+KP+ VT+ +LI    K G    A  +   M+
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S GY PDV T+++ +  Y   G L +   +  +M  + + P++ T+T+LI+   +    +
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTH 666

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVI------------------DGFCKAGNVDEANV--- 493
            A  FLK +      P  ++ + +I                  D      +VD A+V   
Sbjct: 667 RAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKT 726

Query: 494 --------IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
                   +  +M E  C  D   +  LI G C + R+ EA  + + M   G +P +   
Sbjct: 727 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 786

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           NSL+ C  K G+  EA R++    E+  L L
Sbjct: 787 NSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 817



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 187/442 (42%), Gaps = 30/442 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++  LC+    D  + +   M   G +P+       +    + G  D A  +L   
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T  YN L+  L K+    +A+ +  +       P   T+N LI G  ++ ++
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A+     M   G  PD  TY+  I  LC+   V     L   VK K   + +V+ YT+
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI-YTA 514

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK+GK+D A  +   M +    P++ T+NVLI+G  K   M  A  +  +ML+ G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT++ LI    ++G  +  LK+ + M      P+V T+T  ++A   +  L +  
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++    ++P    Y  +IDG+ + G    A   +  M +  CKP     +ILI   
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694

Query: 518 CMKGRMVE-----------------------------AISIFNKMLRIGCAPDDITVNSL 548
             + RM E                             A+ +F KM+  GC  D     +L
Sbjct: 695 SHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGAL 754

Query: 549 ISCLLKGGMPNEAFRIMQRASE 570
           I+   +     EA  ++    E
Sbjct: 755 IAGFCQQERLEEAQGLVHHMKE 776



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 196/448 (43%), Gaps = 30/448 (6%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L+ S  TYN ++   C++   +S   +   M  +G +P+      F+ +  + G+ + A 
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L    +   V  +  +Y +L++   K    D A  + +        P+++T+N+LI+GL
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +  ++K+A      M + G  P +VTY  LI  + +        ++   +     + PD
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM-VSLGYQPD 613

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TYT+ +  Y   G +++   +  +MN  GI P  VT+ VLIDG+ ++G    A    +
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQ-----------------------------GL 422
            M+  G  P +   S LI       ++ +                              L
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIAL 733

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL ++M     + +V  +  LI   C++ RL +A+  +  +K   + P   +YN ++D  
Sbjct: 734 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 793

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G   EA  +V  M E    P   ++ +L+ G  ++G   +A ++F+ +L  G   D+
Sbjct: 794 CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDE 853

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +    LI  LLK  + +E   ++    E
Sbjct: 854 VAWKVLIDGLLKRDLVDECSELIDIMEE 881



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 163/408 (39%), Gaps = 65/408 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++ + +LC+ G  +    +FD +++ G   N  +    +    + GK D A  LL + 
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +++ YN L+  L K+    EA  +  +   +  +P   T+ ILI  + + G  
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAF 595

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M S G  PD+ TY   +        +    +++ ++  +    PD+VTYT 
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN-EEGILPDLVTYTV 654

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID---------------GFGKVGN 382
           +I GY +LG   +A      M   G KPS    ++LI                G   V N
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 383 MVSA---------EY-----MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           + S          EY     + E+M+  G   DV  + +LI G+C+  +L +   L   M
Sbjct: 715 VNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 774

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP------------------ 470
           K + +SP+   +  L++  CK     +A R +  +  N L+P                  
Sbjct: 775 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN 834

Query: 471 -----------------KPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
                                +  +IDG  K   VDE + ++  MEEK
Sbjct: 835 EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 30/304 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++  + + G  D    VF++M S G+ P+      F+ +    G  +    ++++ 
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR---- 273
               +      Y  L++   +      A    K       +P  +  +ILI+ LS     
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700

Query: 274 -------------------IGEVKKAFEF------FYDMGSFGCSPDIVTYNTLISGLCR 308
                              I +V K  E+      F  M   GC+ D+  Y  LI+G C+
Sbjct: 701 KETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 760

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              +     L+  +K +   SP    Y S++   CKLG   +A  + + M   G+ P   
Sbjct: 761 QERLEEAQGLVHHMKERG-MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLE 819

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           ++ +L+ G    G+   A+ +   +LS GY  D V +  LIDG  +   +++  +L D M
Sbjct: 820 SYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM 879

Query: 429 KGKN 432
           + K+
Sbjct: 880 EEKD 883


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 215/448 (47%), Gaps = 9/448 (2%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDY 181
           +NSL  + R+D       F   +++ L L H     T+  ++R LC  G       +FD 
Sbjct: 87  INSLCHLNRVD-----FAFSALAKI-LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 140

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M  +G  PN       ++   +  +   A  + S+     ++ +   YNSL++ L K   
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
                 +  E       PD +T N ++  L + G V +A +    M   G  P++VTYN 
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           L+ G C  NEV    ++   +  K +   +V++Y ++I+GYCK+  +DKA  ++ EM+  
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHK-DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 319

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            + P+ VT+N LI G   VG +  A  +   M++ G +PD+VT+ +L D  C+N  L++ 
Sbjct: 320 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 379

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           + L   ++G N  P++  +T +++ +C+   L DAR     L    L P  + YN +I G
Sbjct: 380 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 439

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G + EA+ + +EM +  C P+  T+ ++  G       +  I +  +ML  G + D
Sbjct: 440 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 499

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRAS 569
             T   L+  L   G+     +I+ + S
Sbjct: 500 VSTTTLLVGMLSDDGLDQSVKQILCKPS 527



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 182/363 (50%), Gaps = 7/363 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ST  +N LL ++ K  +    + + ++       PD +T  I+I  L  +  V  AF   
Sbjct: 44  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 103

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G  PD  T+ TLI GLC   ++     L  ++     F P+VVTY ++I+G CK
Sbjct: 104 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM-IGEGFQPNVVTYGTLINGLCK 162

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
             ++ +A  I++EM + GI P+ VT+N LI G  K+        +   M+    +PDV T
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
            ++++D  C+ G + +   + D M  + + PNV T+  L++  C  N ++ A +    + 
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
             D V     YN +I+G+CK  +VD+A  +  EM  +   P+ VT+  LI G C  GR+ 
Sbjct: 283 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVP 584
           +AIS+F++M+  G  PD +T  +L   L K    ++A  ++ +A E  N     W   + 
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-KAIEGSN-----WDPDIQ 396

Query: 585 LRT 587
           + T
Sbjct: 397 IYT 399



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 177/375 (47%), Gaps = 36/375 (9%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           ++N+L   N  D A     +  +L  QPD  TF  LI+GL   G++ +A   F  M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P++VTY TLI+GLC+  +V     +  E+  K   SP++VTY S+I G CKL +    
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKG-ISPNIVTYNSLIHGLCKLCEWKHV 204

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
           T + NEM    I P   T N ++D   K G +  A  + + M+  G  P+VVT+++L+DG
Sbjct: 205 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           +C   +++  +K+ D M  K+   NV ++  LIN  CK   ++ A    +++   +L P 
Sbjct: 265 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 324

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT---------------------- 509
              YN +I G C  G + +A  +  EM  +   PD VT                      
Sbjct: 325 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 384

Query: 510 -------------FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
                        +T ++ G C  G + +A  +F+ +   G  P+  T N +I  L K G
Sbjct: 385 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 444

Query: 557 MPNEAFRIMQRASED 571
           +  EA ++    +++
Sbjct: 445 LLAEASKLFSEMNKN 459



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 194/377 (51%), Gaps = 24/377 (6%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ----- 216
           ++ S+ +M  + +V  +   M S G  P+   +   ++S     +   A  +L++     
Sbjct: 587 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 646

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F+P  VT     Y +L+N L K      +             PD +T+N LI  L  + E
Sbjct: 647 FQPDVVT-----YGTLMNGLCKMITKGIS-------------PDIFTYNSLIHALCNLCE 688

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            K       +M +    P++V ++T++  LC+   +A  H+++ ++  K    PDVVTYT
Sbjct: 689 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV-DMMIKRGVEPDVVTYT 747

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G+C   +MD+A  +++ M   G  P+  ++N+LI+G+ ++  M  A  + E+M   
Sbjct: 748 ALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 807

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G + D VT+++LI G C  G+L   + L  EM      P++ T+ IL++ LCK + L +A
Sbjct: 808 GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEA 867

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              LK ++ ++L     +YN  IDG C+AG ++ A  + + +  K  +PD  T+ I+I G
Sbjct: 868 MVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHG 927

Query: 517 HCMKGRMVEAISIFNKM 533
            C +G + EA  +F KM
Sbjct: 928 LCKRGLLDEANKLFRKM 944



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 174/382 (45%), Gaps = 49/382 (12%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ST  +  LL ++ K  +    + +  +       PD +T NILI     +  +  AF   
Sbjct: 580 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 639

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G  PD+VTY TL++GLC++  + +G             SPD+ TY S+I   C 
Sbjct: 640 AKLLKLGFQPDVVTYGTLMNGLCKM--ITKG------------ISPDIFTYNSLIHALCN 685

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           L +    T + NEM +  I P+ V F+ ++D   K G +  A  + + M+  G  PDVVT
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++L+DG+C   ++++ +K+ D M  K   PNV ++ ILIN  C+  R++ A   L+Q+ 
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL----------- 513
              L+     YN +I G C  G +  A  +  EM      PD VT+ IL           
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 865

Query: 514 ------------------------IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
                                   I G C  G +  A  +F+ +   G  PD  T N +I
Sbjct: 866 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 925

Query: 550 SCLLKGGMPNEAFRIMQRASED 571
             L K G+ +EA ++ ++  E+
Sbjct: 926 HGLCKRGLLDEANKLFRKMDEN 947



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 225/510 (44%), Gaps = 99/510 (19%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPN---------- 190
           F E SR  L+ N    TYN ++  LC +G L D++ + F  M + G +P+          
Sbjct: 313 FEEMSRQELTPNTV--TYNTLIHGLCHVGRLQDAISL-FHEMVARGQIPDLVTYRTLSDY 369

Query: 191 ----------------------SPMIEFFVS---SCIRAGKCDAAKGLLSQFRPGEVTMS 225
                                  P I+ + +      RAG+ + A+ L S      +  +
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 429

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            + YN +++ L KQ    EA  +F E  +    P+  T+N++ +G  R  E  +  E   
Sbjct: 430 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 489

Query: 286 DMGSFGCSPDIVTYNTLISG--------------LCRVNEVAR--GHEL----------- 318
           +M + G S D+ T  TL+ G              LC+ +  +R  G ++           
Sbjct: 490 EMLARGFSVDVST-TTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSS 548

Query: 319 -----LKEVKFK------SEFS--------PDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
                 +   F       S F+        P  V +T +++   K+        +  +M+
Sbjct: 549 HNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD 608

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           S GI P   T N+LI+ F  +  +  A  +  ++L  G+ PDVVT+ +L++G C+     
Sbjct: 609 SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK----- 663

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
                   M  K +SP+++T+  LI+ALC           L ++  + ++P   +++ V+
Sbjct: 664 --------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 715

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G +  A+ +V  M ++  +PD VT+T L+ GHC++  M EA+ +F+ M+  GC 
Sbjct: 716 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 775

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           P+  + N LI+   +    ++A  ++++ S
Sbjct: 776 PNVRSYNILINGYCQIQRMDKAMGLLEQMS 805



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 154/344 (44%), Gaps = 36/344 (10%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+  +  +  N  DEA+  F         P T  FN L+  +++             M 
Sbjct: 13  HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 72

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           SFG                                      PDV T   VI+  C L ++
Sbjct: 73  SFG------------------------------------IPPDVYTLAIVINSLCHLNRV 96

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D A     ++   G +P A TF  LI G    G +  A ++ ++M+  G+ P+VVT+ +L
Sbjct: 97  DFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTL 156

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G C++ Q+ +   +  EM  K +SPN+ T+  LI+ LCK          + ++  + +
Sbjct: 157 INGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 216

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P  F  N V+D  CK G V EA+ +V  M  +  +P+ VT+  L+ GHC++  +  A+ 
Sbjct: 217 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 276

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +F+ M+   C  + I+ N+LI+   K    ++A  + +  S  +
Sbjct: 277 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 161/333 (48%), Gaps = 15/333 (4%)

Query: 137 KLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           +LG  F   +++  L       TY  +M  LC+M        +F Y         + +I 
Sbjct: 631 RLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTY---------NSLIH 681

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
              + C    +      LL++    ++  +  +++++++AL K+     A  +     + 
Sbjct: 682 ALCNLC----EWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +PD  T+  L+ G     E+ +A + F  M   GC P++ +YN LI+G C++  + + 
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 797

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             LL+++  +   + D VTY ++I G C +G++  A  +++EM + G  P  VT+ +L+D
Sbjct: 798 MGLLEQMSLQGLIA-DTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 856

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
              K  ++  A  + + +       D++ ++  IDG CR G+L     L   +  K L P
Sbjct: 857 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 916

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +V T+ I+I+ LCK   L++A +  +++  ND+
Sbjct: 917 DVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 1/279 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +LC +     V  + + M +   +PN  +    V +  + G    A  ++   
Sbjct: 675 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 734

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      Y +L++    ++  DEAV +F         P+  ++NILI G  +I  +
Sbjct: 735 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 794

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      M   G   D VTYNTLI GLC V  +     L  E+    +  PD+VTY  
Sbjct: 795 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI-PDLVTYRI 853

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK   + +A  +   +    +    + +N+ IDG  + G + +A  +   + S G
Sbjct: 854 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             PDV T++ +I G C+ G L++  KL  +M   ++  N
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 218/435 (50%), Gaps = 25/435 (5%)

Query: 159 YNLVMRSLC---EMGLHDSVQVV---FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           YN+ + S+C   E+   D +++    +  M   G + N   +  F      AGK D A  
Sbjct: 380 YNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFE 439

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           ++ +            Y+ ++  L   +  ++A  +F+E  +    P  +T+ ILI    
Sbjct: 440 IICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFC 499

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G +++A  +F +M    C+P++VTY +LI    +  +V   ++L + +  +    P+V
Sbjct: 500 KAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGS-KPNV 558

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEM-----------------NSCGIKPSAVTFNVLID 375
           VTYT++I G+CK G++DKA  IY  M                 N C   P+ +T+  L+D
Sbjct: 559 VTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCE-TPNIITYGALVD 617

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  K   +  A  + + M   G  P+ + + +LIDG+C+ G+L    ++  +M  +   P
Sbjct: 618 GLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCP 677

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           N+YT++ LIN+L KE RL+   + L ++  N   P   +Y  +IDG CK G  +EA  ++
Sbjct: 678 NLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLM 737

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +MEE  C P+ +T+T +I G    G++ + + ++  M   GCAP+ IT   LI+     
Sbjct: 738 LKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCST 797

Query: 556 GMPNEAFRIMQRASE 570
           G+ +EA R++    +
Sbjct: 798 GLLDEAHRLLDEMKQ 812



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 202/435 (46%), Gaps = 23/435 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LCE  L      + D MRS   +PN       +S C+  G+    K +LS   
Sbjct: 275 YNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMM 334

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV- 277
                 +  M+NSL++A  K  +   A  +FK+  +   QP    +NI I  +    E+ 
Sbjct: 335 TEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELP 394

Query: 278 -----KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
                + A + + +M   G   + V  +     LC   +  +  E++ E+  K  F PD 
Sbjct: 395 GSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKG-FVPDD 453

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY+ VI   C   K++KA  ++ EM   GI PS  T+ +LID F K G +  A    + 
Sbjct: 454 STYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDE 513

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML     P+VVT++SLI  Y +  ++    KL + M  +   PNV T+T LI+  CK  +
Sbjct: 514 MLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQ 573

Query: 453 LNDARRFLKQLKW---------------NDL-VPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           ++ A +   +++                ND   P    Y  ++DG CKA  V+EA+ ++ 
Sbjct: 574 IDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLD 633

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M    C+P+++ +  LI G C  G++  A  +F KM   G  P+  T +SLI+ L K  
Sbjct: 634 TMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEK 693

Query: 557 MPNEAFRIMQRASED 571
             +   +++ +  E+
Sbjct: 694 RLDLVLKVLSKMLEN 708



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 212/495 (42%), Gaps = 91/495 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC+    +   ++F+ M+ +G +P+       + S  +AG    A+    + 
Sbjct: 455 TYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM 514

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   Y SL++A +K     +A  +F+      S+P+  T+  LI G  + G++
Sbjct: 515 LRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQI 574

Query: 278 KKA---------------FEFFYDMGSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKE 321
            KA                + ++ +    C +P+I+TY  L+ GLC+ N V   HELL  
Sbjct: 575 DKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDT 634

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM----------------------- 358
           +       P+ + Y ++I G+CK GK++ A  ++ +M                       
Sbjct: 635 MSVNG-CEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEK 693

Query: 359 --------------NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
                         NSC   P+ V +  +IDG  KVG    A  +  +M   G  P+V+T
Sbjct: 694 RLDLVLKVLSKMLENSC--TPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVIT 751

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++++IDG+ + G++ Q L+L  +M  K  +PN  T+ +LIN  C    L++A R L ++K
Sbjct: 752 YTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK 811

Query: 465 ---W------------------------------NDLVPKPFMYNPVIDGFCKAGNVDEA 491
              W                              N+ VP   +Y  +ID F KAG ++ A
Sbjct: 812 QTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGA 871

Query: 492 NVIVAEMEE--KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             ++ E+         +K  +T LI       ++ +A  ++  M+     P+  T   LI
Sbjct: 872 LNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLI 931

Query: 550 SCLLKGGMPNEAFRI 564
             L + G   EA ++
Sbjct: 932 KGLTRVGKWQEALQL 946



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 214/492 (43%), Gaps = 41/492 (8%)

Query: 120 KLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH-DSVQVV 178
           +LS    +EV+  + +P+  ++F  ++   +  +H+   YN ++  LC   ++ D V   
Sbjct: 97  RLSEPLVVEVMNLVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHK 156

Query: 179 F-DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           F   +R D       ++ F +  C R G  + A   L + +      S   YN+L+   +
Sbjct: 157 FLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFL 216

Query: 238 KQNNADEAVYMFKEY----FRL---------YSQ-------------------PDTWTFN 265
           + +  D A  + +E     FR+         YS                    PDT  +N
Sbjct: 217 RADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYN 276

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            ++ GL      ++A +    M S  C P++VTY  L+SG     ++ R   +L  +  +
Sbjct: 277 RMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTE 336

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             + P+   + S++  YCK      A  ++ +M  CG +P  + +N+ I        +  
Sbjct: 337 GCY-PNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPG 395

Query: 386 ------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
                 AE     ML  G + + V  S+     C  G+ ++  ++  EM  K   P+  T
Sbjct: 396 SDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDST 455

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ +I  LC  +++  A    +++K N +VP  + Y  +ID FCKAG + +A     EM 
Sbjct: 456 YSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEML 515

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
              C P+ VT+T LI  +    ++ +A  +F  ML  G  P+ +T  +LI    K G  +
Sbjct: 516 RDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQID 575

Query: 560 EAFRIMQRASED 571
           +A +I  R   D
Sbjct: 576 KACQIYARMQGD 587


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 204/413 (49%), Gaps = 1/413 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + + YN ++ SL +  L D ++ V+  + ++   PN       V+   + G    A+   
Sbjct: 158 TLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYA 217

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +   TF Y SL+    +    D A  +F    +   Q +  ++  LI GL   
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +A + F DM    C P + TY  LI  L           L  E+K K    P+V T
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG-CEPNVHT 336

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT +I G CK  KMD+A  + +EM+  G+ PS VT+N LIDG+ K G +  A  + + M 
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S    P+  T++ LI G C+  ++++ + L ++M  + LSP++ T+  LI+  CK N L 
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A R L  +  N LVP  + Y+  ID  CK G V+EA  +   ++ K  K ++V +T LI
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            G+C  G++  A S+  +ML   C P+  T N LI  L K     EA  ++ +
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 210/428 (49%), Gaps = 7/428 (1%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS-PMIEFFV 198
           +K +    +N  ++ +  T+N ++   C++G     ++    +   G  P++       +
Sbjct: 178 MKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLIL 237

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
             C   G  +A +  L   + G    +   Y +L++ L +    +EA+ +F +       
Sbjct: 238 GHCRNKGVDNAYEVFLIMPQKG-CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCC 296

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P   T+ +LI  LS  G   +A   F +M   GC P++ TY  LI GLC+ N++    ++
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN--EMNSCGIKPSAVTFNVLIDG 376
           L E+  K    P VVTY ++I GYCK G +D A  I +  E NSCG  P+  T+N LI G
Sbjct: 357 LSEMSEKG-LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG--PNTRTYNELICG 413

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K   +  A  +  +ML     P ++T++SLI G C+   L    +L   M    L P+
Sbjct: 414 LCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +T+++ I+ LCKE R+ +A      +K   +     +Y  +IDG+CK G +D A  ++ 
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M    C P+  T+ +LI G C + +M EA S+  KML +G  P  +T   LI  +LK G
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593

Query: 557 MPNEAFRI 564
             + A ++
Sbjct: 594 AFDHALKV 601



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 231/497 (46%), Gaps = 24/497 (4%)

Query: 101 TLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYN 160
           ++L R ++      R L   L+P +   +     +P+  L F  +  +     H+  +Y+
Sbjct: 46  SILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYS 105

Query: 161 LVMRSLCE---MGLHDSVQV-----------------VFDYMRSDGHLPNSPMIEFFVSS 200
            ++  L     +G+ + +++                 VF  M +DG     P +  + + 
Sbjct: 106 SMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTI 165

Query: 201 CIRAGK---CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
            +   K    D  K +  +    +++ + + +N+++N   K  N  EA     +  +   
Sbjct: 166 LMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGL 225

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            PDT+T+  LI G  R   V  A+E F  M   GC  + V+Y  LI GLC    +    +
Sbjct: 226 HPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALK 285

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  ++  +    P V TYT +I      G+  +A  ++NEM   G +P+  T+ VLIDG 
Sbjct: 286 LFADMT-EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K   M  A  M   M   G +P VVT+++LIDGYC+ G ++   ++ D M+  +  PN 
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  LI  LCK+ +++ A   L ++    L P    YN +I G CK  +++ A  +++ 
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M E    PD+ T+++ I   C +GR+ EA ++F+ +   G   +++   +LI    K G 
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 558 PNEAFRIMQRASEDQNL 574
            + A+ +++R   D  L
Sbjct: 525 IDVAYSLLERMLNDACL 541



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 194/395 (49%), Gaps = 1/395 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TY +++ +L   G       +F+ M+  G  PN       +    +  K D A+ +L
Sbjct: 298 TVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKML 357

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +  S   YN+L++   K+   D+A  +          P+T T+N LI GL + 
Sbjct: 358 SEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK 417

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +V KA      M     SP ++TYN+LI G C+VN++   + LL  +  ++   PD  T
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN-ENGLVPDQWT 476

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+  I   CK G++++A  +++ + + G+K + V +  LIDG+ KVG +  A  + ERML
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +   LP+  T++ LI+G C+  ++ +   L  +M    + P V T+TILI  + K+   +
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A +    +      P    Y   +  +   G ++E + ++A+M E+   PD VT+T+LI
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            G+   G    A      M+  GC P    V+ LI
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 191/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LCE G  +    +F  M  D   P        + +   +G+   A  L ++ 
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      +   Y  L++ L K+N  DEA  M  E       P   T+N LI G  + G +
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AFE    M S  C P+  TYN LI GLC+  +V +   LL ++  + + SP ++TY S
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM-LERKLSPSLITYNS 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK+  ++ A  + + MN  G+ P   T++V ID   K G +  A  + + + + G
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + V +++LIDGYC+ G+++    L + M      PN YT+ +LI  LCKE ++ +A 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++    + P    Y  +I    K G  D A  +   M     +PD  T+T  +  +
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             +G + E   +  KM   G  PD +T   LI    + G+ + AF  ++
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 199/440 (45%), Gaps = 19/440 (4%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++   C+ G+ D    + D M S+   PN+      +    +  K   A  LL
Sbjct: 368 SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALL 427

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++    +++ S   YNSL++   K N+ + A  +          PD WT+++ I  L + 
Sbjct: 428 NKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A   F  + + G   + V Y  LI G C+V ++   + LL+ +       P+  T
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM-LNDACLPNSYT 546

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I G CK  KM +A+ +  +M + G+KP+ VT+ +LI    K G    A  +   M+
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S GY PDV T+++ +  Y   G L +   +  +M  + + P++ T+T+LI+   +    +
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTH 666

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE------------------ANVIVA 496
            A  FLK +      P  ++ + +I        + E                  A  +  
Sbjct: 667 RAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFE 726

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +M E  C  D   +  LI G C + R+ EA  + + M   G +P +   NSL+ C  K G
Sbjct: 727 KMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLG 786

Query: 557 MPNEAFRIMQRASEDQNLQL 576
           +  EA R++    E+  L L
Sbjct: 787 VYAEAVRLVDAMVENGLLPL 806



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 187/431 (43%), Gaps = 19/431 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++  LC+    D  + +   M   G +P+       +    + G  D A  +L   
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T  YN L+  L K+    +A+ +  +       P   T+N LI G  ++ ++
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A+     M   G  PD  TY+  I  LC+   V     L   VK K   + +V+ YT+
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI-YTA 514

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYCK+GK+D A  +   M +    P++ T+NVLI+G  K   M  A  +  +ML+ G
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT++ LI    ++G  +  LK+ + M      P+V T+T  ++A   +  L +  
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++    ++P    Y  +IDG+ + G    A   +  M +  CKP     +ILI   
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694

Query: 518 CMKGRMVE------------------AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
             + RM E                  A+ +F KM+  GC  D     +LI+   +     
Sbjct: 695 SHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 754

Query: 560 EAFRIMQRASE 570
           EA  ++    E
Sbjct: 755 EAQGLVHHMKE 765



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 196/437 (44%), Gaps = 19/437 (4%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L+ S  TYN ++   C++   +S   +   M  +G +P+      F+ +  + G+ + A 
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L    +   V  +  +Y +L++   K    D A  + +        P+++T+N+LI+GL
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +  ++K+A      M + G  P +VTY  LI  + +        ++   +     + PD
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM-VSLGYQPD 613

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TYT+ +  Y   G +++   +  +MN  GI P  VT+ VLIDG+ ++G    A    +
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQ------------------GLKLCDEMKGKNL 433
            M+  G  P +   S LI       ++ +                   LKL ++M     
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGC 733

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           + +V  +  LI   C++ RL +A+  +  +K   + P   +YN ++D  CK G   EA  
Sbjct: 734 TIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVR 793

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +V  M E    P   ++ +L+ G  ++G   +A ++F+ +L  G   D++    LI  LL
Sbjct: 794 LVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLL 853

Query: 554 KGGMPNEAFRIMQRASE 570
           K  + +E   ++    E
Sbjct: 854 KRDLVDECSELIDIMEE 870



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 180/413 (43%), Gaps = 19/413 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++ + +LC+ G  +    +FD +++ G   N  +    +    + GK D A  LL + 
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +++ YN L+  L K+    EA  +  +   +  +P   T+ ILI  + + G  
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAF 595

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M S G  PD+ TY   +        +    +++ ++  +    PD+VTYT 
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN-EEGILPDLVTYTV 654

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID---------------GFGKVGN 382
           +I GY +LG   +A      M   G KPS    ++LI                G   V N
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 383 MVSAEY---MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            +  E    + E+M+  G   DV  + +LI G+C+  +L +   L   MK + +SP+   
Sbjct: 715 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 774

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L++  CK     +A R +  +  N L+P    Y  ++ G    G+ ++A  +   + 
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 834

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                 D+V + +LI G   +  + E   + + M   GC P+ +T + LI  L
Sbjct: 835 SCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 59/150 (39%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++   C+    +  Q +  +M+  G  P+  +    +  C + G    A  L+    
Sbjct: 740 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 799

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +      Y  L+  L  + + ++A  +F          D   + +LI GL +   V 
Sbjct: 800 ENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 859

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           +  E    M   GC P+ +TY+ LI GL R
Sbjct: 860 ECSELIDIMEEKGCQPNPLTYSLLIEGLER 889


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 215/444 (48%), Gaps = 2/444 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           LE ++  D  +      EF +  + +     TY  + ++L   G    +  V + MR  G
Sbjct: 129 LEFLRVHDKVEDMAAVFEFMQKKI-IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
            + N+      +   I++G C  A  +  +     +  S   Y++L+ AL K+ +++  +
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            + KE   L  +P+ +TF I I+ L R G++ +A+E F  M   GC PD+VTY  LI  L
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C   ++    EL  ++K      PD V Y +++  +   G +D     +++M + G  P 
Sbjct: 308 CNAGQLENAKELFVKMKANGH-KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPD 366

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VTF +L+D   K  +   A    + M   G LP++ T+++LI G  R G++   LKL D
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLD 426

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M+   + P  YT+   I+   K      A    +++K   +VP     N  +    + G
Sbjct: 427 TMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMG 486

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            + EA  +   + E    PD VT+ +++  +   G++ EA+++ ++M+R GC PD I VN
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546

Query: 547 SLISCLLKGGMPNEAFRIMQRASE 570
           SLI  L K G  +EA+++  R  +
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKD 570



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 212/457 (46%), Gaps = 16/457 (3%)

Query: 108 YLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLC 167
           Y    C R L        + E+ +R+D+   G   +              TY +++ +LC
Sbjct: 263 YTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV--------------TYTVLIDALC 308

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
             G  ++ + +F  M+++GH P+  +    +      G  D  K   SQ           
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            +  L++ L K  + DEA   F    +    P+  T+N LI GL R G ++ A +    M
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM 428

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            S G  P   TY T I    +  E  +  E  +++K K    P++V   + +    ++G+
Sbjct: 429 ESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKG-IVPNIVACNASLYSLAEMGR 487

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           + +A  ++N +   G+ P +VT+N+++  + KVG +  A  +   M+  G  PDV+  +S
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LID   + G++++  ++ D MK   LSP V T+  L++ L KE R+  A    + +    
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK 607

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    +N ++D FCK   V+ A  + ++M    CKPD +T+  +I G   + ++  A 
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             F++ L+    PD +T+ +L+  L+K G   +A  I
Sbjct: 668 WFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISI 703



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 176/313 (56%), Gaps = 1/313 (0%)

Query: 229  YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
            YN L+  L++ +  ++A  +FK+   +   PD +TFN+L+    + G++ + FE + +M 
Sbjct: 791  YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850

Query: 289  SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            S  C PD +TYN +IS L + N + +  +   ++   S+F P   TY  +I G  K+G++
Sbjct: 851  SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL-VSSDFRPTPRTYGPLIDGLAKVGRL 909

Query: 349  DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            ++A  ++ EM+  G KP+   FN+LI+G+GK+G+  +A  + +RM++ G  PD+ +++ L
Sbjct: 910  EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 409  IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
            +D  C  G++++ L   +E+K   L P+   +  +IN L K  R+ +A     +++   +
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 469  VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            VP  + YN ++     AG V++A  +  E++    +PD  T+  LI G+ +      A +
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089

Query: 529  IFNKMLRIGCAPD 541
            ++  M+  GC P+
Sbjct: 1090 VYKNMMVDGCNPN 1102



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 194/418 (46%), Gaps = 9/418 (2%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           +L L  +  T+ + +R L   G  D    +F  M  +G  P+       + +   AG+ +
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS----QPDTWTF 264
            AK L  + +         +Y +LL+      + D     FKE++         PD  TF
Sbjct: 315 NAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT----FKEFWSQMEADGYMPDVVTF 370

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            IL+  L +  +  +AF  F  M   G  P++ TYNTLI GL R   +    +LL  ++ 
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTME- 429

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
                P   TY + I  + K G+  KA   + +M + GI P+ V  N  +    ++G + 
Sbjct: 430 SVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLR 489

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A+ M   +   G  PD VT++ ++  Y + GQ+++ + L  EM      P+V     LI
Sbjct: 490 EAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI 549

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           ++L K  R+++A +   ++K   L P    YN ++ G  K G V +A  +   M  K+C 
Sbjct: 550 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCS 609

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           P+ ++F  L+   C    +  A+ +F+KM  + C PD +T N++I  L+K    N AF
Sbjct: 610 PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 200/437 (45%), Gaps = 3/437 (0%)

Query: 137  KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIE 195
            K+   F  F ++  S++    T   ++  L + G + D++ +  D+M       N    E
Sbjct: 662  KVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721

Query: 196  FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR- 254
              +   +   + D A     +     +         L+  L K      A  +F ++ + 
Sbjct: 722  DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781

Query: 255  LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
            L   P   ++N LI  L  +   +KA++ F DM + GC+PD  T+N L++   +  ++  
Sbjct: 782  LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841

Query: 315  GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              EL KE+       PD +TY  VIS   K   +DKA   + ++ S   +P+  T+  LI
Sbjct: 842  LFELYKEM-ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900

Query: 375  DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            DG  KVG +  A  + E M  +G  P+   F+ LI+GY + G      +L   M  + + 
Sbjct: 901  DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 435  PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
            P++ ++TIL++ LC   R+++A  +  +LK   L P    YN +I+G  K+  ++EA  +
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 495  VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              EM  +   PD  T+  L++   + G + +A  ++ ++   G  PD  T N+LI     
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSL 1080

Query: 555  GGMPNEAFRIMQRASED 571
               P  A+ + +    D
Sbjct: 1081 SENPEHAYTVYKNMMVD 1097



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 163/355 (45%), Gaps = 6/355 (1%)

Query: 162  VMRSLCEMGLHDSVQVVFD-YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
            ++R LC+         +FD + +  G  P        +   +     + A  L    +  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 221  EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
                  F +N LL    K     E   ++KE      +PD  T+NI+I  L++   + KA
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 281  FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSV 338
             +FFYD+ S    P   TY  LI GL +V  +     L +E+   S++   P+   +  +
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM---SDYGCKPNCAIFNIL 934

Query: 339  ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
            I+GY K+G  + A  ++  M + GI+P   ++ +L+D     G +  A Y    + S G 
Sbjct: 935  INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 399  LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             PD + ++ +I+G  ++ ++ + L L +EM+ + + P++YT+  L+  L     +  A+R
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 459  FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
              ++L+   L P  F YN +I G+  + N + A  +   M    C P+  T+  L
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 11/293 (3%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
            T+N+++    + G    +  ++  M S    P++      +SS  ++   D A       
Sbjct: 825  TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL 884

Query: 215  --SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              S FRP   T     Y  L++ L K    +EA+ +F+E      +P+   FNILI G  
Sbjct: 885  VSSDFRPTPRT-----YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 273  RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            +IG+ + A + F  M + G  PD+ +Y  L+  LC    V        E+K  +   PD 
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK-STGLDPDF 998

Query: 333  VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            + Y  +I+G  K  +M++A  +YNEM + GI P   T+N L+   G  G +  A+ M E 
Sbjct: 999  IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058

Query: 393  MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
            +   G  PDV T+++LI GY  +        +   M     +PN+ T+  L N
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 74/155 (47%)

Query: 148  VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
            VN  +    K+Y +++  LC  G  D     F+ ++S G  P+       ++   ++ + 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 208  DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            + A  L ++ R   +    + YNSL+  L      ++A  M++E      +PD +T+N L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 268  IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            I+G S     + A+  + +M   GC+P+I TY  L
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 61/144 (42%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+ K +  ++ T+  +  AL     L      L +++    V   + YN +I    ++G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             EA  +   M  +  KP   T++ L++    K      + +  +M  +G  P+  T   
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 548 LISCLLKGGMPNEAFRIMQRASED 571
            I  L + G  +EA+ I +R  ++
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDE 291


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 219/479 (45%), Gaps = 39/479 (8%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH-DSVQVVFDYMRSD 185
           L  ++   +P   L+ L  +          + Y  ++R L       D ++V+   MR +
Sbjct: 48  LTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRRE 107

Query: 186 GHLPNSPMIEFFVSSCIRAGK-CDAAKGLLSQFRP-GEVTMSTFMYNSLLNALV------ 237
           GH     ++  F+ S  R     DA   +L+Q  P   +   T +YN LLN LV      
Sbjct: 108 GHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMK 167

Query: 238 -----------------------------KQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
                                        + +    AV M +E       PD  TF  L+
Sbjct: 168 LLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLM 227

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           QG    G +K A      M   GCSP  VT N LI+G C++  V      +++ +  + F
Sbjct: 228 QGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQ-EIANGF 286

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD +TY + ++G C+ G +  A  + + M   G  P   T+N++++   K G +  A+ 
Sbjct: 287 EPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 346

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M+  G LPD+ TF++LI   C   +L + L L  ++  K LSP+VYTF ILINALC
Sbjct: 347 ILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALC 406

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K      A R  +++K +   P    YN +ID  C  G + +A  ++ EME   C    V
Sbjct: 407 KVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTV 466

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T+  +I G C K R+ EA  +F++M   G + + IT N+LI  L K    ++A +++ +
Sbjct: 467 TYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQ 525



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 201/418 (48%), Gaps = 11/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T+  +M+   E G   +   V   M   G  P    +   ++   + G+ + A G + Q 
Sbjct: 222 TFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQE 281

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P ++T     YN+ +N L +  +   A+ +     +    PD +T+NI++  L 
Sbjct: 282 IANGFEPDQIT-----YNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 336

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G++++A      M   GC PDI T+NTLI  LC  N +    +L ++V  K   SPDV
Sbjct: 337 KNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG-LSPDV 395

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +I+  CK+G    A  ++ EM S G  P  VT+N LID    +G +  A  + + 
Sbjct: 396 YTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKE 455

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G     VT++++IDG C+  ++ +  ++ D+M  + +S N  TF  LI+ LCK+ R
Sbjct: 456 MESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA + + Q+    L P    YN ++  +CK G++ +A  I+  M     + D VT+  
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G C  GR   A+ +   M   G        N +I  L +     +A  + +  +E
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTE 633



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 204/444 (45%), Gaps = 38/444 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  L E      ++ V+  M   G  P+       + +  RA +   A  +L +  
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V      + +L+   V++ +   A+ +      +   P   T N+LI G  ++G V+
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVE 272

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL-LKEVKFKSEFSPDVVTYTS 337
            A  +     + G  PD +TYNT ++GLC+   V  GH L + +V  +    PDV TY  
Sbjct: 273 DALGYIQQEIANGFEPDQITYNTFVNGLCQNGHV--GHALKVMDVMVQEGHDPDVFTYNI 330

Query: 338 VISGYCKLGKMDKATGIYNEM--NSC---------------------------------G 362
           V++  CK G++++A GI N+M    C                                 G
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P   TFN+LI+   KVG+   A  + E M S G  PD VT+++LID  C  G+L + L
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKAL 450

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  EM+      +  T+  +I+ LCK+ R+ +A     Q+    +      +N +IDG 
Sbjct: 451 DLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 510

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK   +D+AN ++++M  +  +P+ +T+  ++  +C +G + +A  I   M   G   D 
Sbjct: 511 CKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDV 570

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
           +T  +LI+ L K G    A ++++
Sbjct: 571 VTYGTLINGLCKAGRTQVALKLLR 594



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 197/453 (43%), Gaps = 37/453 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++   C++G  +          ++G  P+      FV+   + G    A  ++   
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                    F YN ++N L K    +EA  +  +       PD  TFN LI  L     +
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    +   G SPD+ T+N LI+ LC+V +      L +E+K  S  +PD VTY +
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMK-SSGCTPDEVTYNT 435

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C LGK+ KA  +  EM S G   S VT+N +IDG  K   +  AE + ++M   G
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN--------------------- 436
              + +TF++LIDG C++ +++   +L  +M  + L PN                     
Sbjct: 496 ISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAA 555

Query: 437 --------------VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                         V T+  LIN LCK  R   A + L+ ++   +   P  YNPVI   
Sbjct: 556 DILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSL 615

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV-EAISIFNKMLRIGCAPD 541
            +  N  +A  +  EM E    PD  T+ I+  G C  G  + EA     +M+  G  P+
Sbjct: 616 FRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPE 675

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
             +   L   LL  GM +   R ++   E  +L
Sbjct: 676 FSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADL 708



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 119/242 (49%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              D V Y  +++   +  KM     +Y+EM   GIKP  VTFN L+    +   + +A 
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAV 205

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M E M S G  PD  TF++L+ G+   G +   L++   M     SP   T  +LIN  
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  R+ DA  +++Q   N   P    YN  ++G C+ G+V  A  ++  M ++   PD 
Sbjct: 266 CKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDV 325

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+ I++   C  G++ EA  I N+M+  GC PD  T N+LI  L  G    EA  + ++
Sbjct: 326 FTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQ 385

Query: 568 AS 569
            +
Sbjct: 386 VT 387



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 1/224 (0%)

Query: 348 MDKATGIYNEMNSC-GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           +D    + N+++   GI+   V +N L++   +   M   E +   M   G  PDVVTF+
Sbjct: 130 VDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFN 189

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +L+   CR  Q+   + + +EM    ++P+  TFT L+    +E  +  A R   ++   
Sbjct: 190 TLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM 249

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P     N +I+G+CK G V++A   + +      +PD++T+   + G C  G +  A
Sbjct: 250 GCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHA 309

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + + + M++ G  PD  T N +++CL K G   EA  I+ +  E
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVE 353


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 208/420 (49%), Gaps = 7/420 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   ++ ++ ++ +M  +D V  +++ M+  G   N       ++   R  +   A   L
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +            + SLLN   + +   +A+YMF     +  +P+   +N +I GL + 
Sbjct: 140 GKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKS 199

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPD 331
            +V  A +    M   G  PD VTYN+LISGLC   R ++  R    +     K E  PD
Sbjct: 200 KQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR----MVSCMTKREIYPD 255

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V T+ ++I    K G++ +A  +Y EM    + P  VT+++LI G      +  AE M  
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFG 315

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+S G  PDVVT+S LI+GYC++ ++  G+KL  EM  + +  N  T+T+LI   C+  
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAG 375

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +LN A    K + +  + P    YN ++ G C  G +++A VI+A+M++     D VT+ 
Sbjct: 376 KLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYN 435

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           I+I G C  G + +A  ++  +   G  PD  T  +++  L K G+  EA  + ++  ED
Sbjct: 436 IIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKED 495



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 121/232 (52%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P +  ++ ++S   K+ K D    ++ +M   GI  +  T N+L++ F +   +  A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             +M+  G+ PD+VTF SL++G+CR  ++   L + D M      PNV  +  +I+ LCK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             ++++A   L +++ + + P    YN +I G C +G  D+A  +V+ M ++   PD  T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           F  LI     +GR+ EA  ++ +M+R    PD +T + LI  L      +EA
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 3/231 (1%)

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+D +  ++  M  C   PS   F+ L+    K+       Y+ E+M   G   ++ T +
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            L++ +CR  QL+  L    +M      P++ TF  L+N  C+ +R+ DA     ++   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P   +YN +IDG CK+  VD A  ++  ME    +PD VT+  LI G C  GR  +A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
             + + M +    PD  T N+LI   +K G  +EA   +  M R S D ++
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDI 291



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 1/216 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           SL+    TY+L++  LC     D  + +F +M S G  P+       ++   ++ K +  
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +     V  +T  Y  L+    +    + A  +FK        P+  T+N+L+ G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHG 405

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L   G+++KA     DM   G   DIVTYN +I G+C+  EVA   +L   +  K   +P
Sbjct: 406 LCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG-LTP 464

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           D+ TYT+++ G  K G   +A  ++ +M   GI P+
Sbjct: 465 DIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 217/479 (45%), Gaps = 44/479 (9%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDY 181
           +NSL  + R+D       F   +++ L L H     T+  ++R LC  G       +FD 
Sbjct: 112 INSLCHLNRVD-----FAFSALAKI-LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 165

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M  +G  PN       ++   + G   AA  LL     G    +  ++++L+++L K   
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
             EA  +F E       P+  T+N LI GL ++ E K       +M      PD+ T NT
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT------------------------- 336
           ++  LC+   VA  H+++ ++       P+VVTY                          
Sbjct: 286 VVDALCKEGMVAEAHDVV-DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344

Query: 337 ----------SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
                     ++I+GYCK+  +DKA  ++ EM+   + P+ VT+N LI G   VG +  A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   M++ G +PD+VT+ +L D  C+N  L++ + L   ++G N  P++  +T +++ 
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           +C+   L DAR     L    L P  + YN +I G CK G + EA+ + +EM +  C P+
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             T+ ++  G       +  I +  +ML  G + D  T   L+  L   G+     +I+
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 219/453 (48%), Gaps = 49/453 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T  +V+ SLC +   D        +   GH P++      +      GK   A  L  + 
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P  VT     Y +L+N L K  N   A+ + +   +   QP+   F+ LI  L 
Sbjct: 167 IGEGFQPNVVT-----YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLC 221

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +  +V +AF  F +M + G SP+IVTYN+LI GLC++ E      L+ E+   S+  PDV
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM-VDSKIMPDV 280

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T  +V+   CK G + +A  + + M   G++P+ VT+N L+DG      +  A  + + 
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+    + +V+++++LI+GYC+   +++ + L +EM  + L+PN  T+  LI+ LC   R
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 453 LND-----------------------------------ARRFLKQLKWNDLVPKPFMYNP 477
           L D                                   A   LK ++ ++  P   +Y  
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG C+AG +++A  + + +  K  +P+  T+ I+I G C +G + EA  +F++M + G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C+P+D T N +    L+    NEA R ++   E
Sbjct: 521 CSPNDCTYNLITRGFLRN---NEALRTIELLEE 550



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 183/342 (53%), Gaps = 2/342 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           ++N+L   N  D A     +  +L  QPD  TF  LI+GL   G++ +A   F  M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P++VTY TLI+GLC+V   +    LL+ ++ +    P+VV ++++I   CK  ++ +A
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSME-QGNCQPNVVVFSTLIDSLCKDRQVTEA 229

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             I++EM + GI P+ VT+N LI G  K+        +   M+    +PDV T ++++D 
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G + +   + D M  + + PNV T+  L++  C  N ++ A +    +   D V  
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I+G+CK  +VD+A  +  EM  +   P+ VT+  LI G C  GR+ +AIS+F+
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           +M+  G  PD +T  +L   L K    ++A  ++ +A E  N
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-KAIEGSN 450



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 173/344 (50%), Gaps = 1/344 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+  +  +  N  DEA+  F         P T  FN L+  +++             M 
Sbjct: 38  HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 97

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           SFG  PD+ T   +I+ LC +N V      L ++  K    PD  T+T++I G C  GK+
Sbjct: 98  SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKI-LKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  ++++M   G +P+ VT+  LI+G  KVGN  +A  +   M      P+VV FS+L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID  C++ Q+ +   +  EM  K +SPN+ T+  LI+ LCK          + ++  + +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P  F  N V+D  CK G V EA+ +V  M  +  +P+ VT+  L+ GHC++  +  A+ 
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +F+ M+   C  + I+ N+LI+   K    ++A  + +  S  +
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 188/359 (52%), Gaps = 5/359 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +Y  ++  +C++G  D+   +    + DG L  PN  M    + +  +      A GL S
Sbjct: 414 SYATLINGVCKIG--DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 471

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     ++     Y++L+          EA+ +  E       PD  T+ IL+  L + G
Sbjct: 472 EMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEG 531

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +VK+A      M      PD+ TYNTL++G   V EV +   +   +      +PDV TY
Sbjct: 532 KVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG-VTPDVHTY 590

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I+G+CK   +D+A  ++ EM+   + P  VT++ L+DG  K G +     + + M  
Sbjct: 591 TILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRD 650

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   DV+T++SLIDG C+NG L++ + L ++MK + + PN +TFTIL++ LCK  RL D
Sbjct: 651 RGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKD 710

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           A+   + L         ++YN +I G CK G ++EA  ++++MEE  C P+ VTF I+I
Sbjct: 711 AQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIII 769



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 211/419 (50%), Gaps = 11/419 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY-----MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           T N+++   C MG     Q+ F +     +   G+ P++  +   +      G+   A  
Sbjct: 344 TLNILINCFCHMG-----QITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH 398

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              +       ++   Y +L+N + K  +   A+ + ++     ++P+   ++ +I  L 
Sbjct: 399 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC 458

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   V +A+  F +M   G S D+VTY+TLI G C V ++     LL E+  K+  +PDV
Sbjct: 459 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKT-INPDV 517

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TYT ++    K GK+ +A  +   M    +KP   T+N L++G+  V  +  A+++   
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PDV T++ LI+G+C++  +++ L L  EM  KN+ P+  T++ L++ LCK  R
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++     + +++          YN +IDG CK G++D+A  +  +M+++  +P+  TFTI
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           L+ G C  GR+ +A  +F  +L  G   D    N +I    K G+  EA  ++ +  E+
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEEN 756



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 218/443 (49%), Gaps = 6/443 (1%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +N    IKR+D   L L    F  + LS       +N ++ S  +M  + +   +   + 
Sbjct: 280 INGFCKIKRVDKA-LNL----FKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLE 334

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
             G  P+   +   ++     G+      +L++        ST   N+L+  L  +    
Sbjct: 335 LKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVK 394

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           +A++   +      Q +  ++  LI G+ +IG+ + A +    +      P++  Y+T+I
Sbjct: 395 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTII 454

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             LC+   V+  + L  E+  K   S DVVTY+++I G+C +GK+ +A G+ NEM    I
Sbjct: 455 DALCKYQLVSEAYGLFSEMTVKG-ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   T+ +L+D  GK G +  A+ +   ML     PDV T+++L++GY    ++ +   
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQH 573

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           + + M    ++P+V+T+TILIN  CK   +++A    K++   ++VP    Y+ ++DG C
Sbjct: 574 VFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K+G +     ++ EM ++    D +T+  LI G C  G + +AI++FNKM   G  P+  
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
           T   L+  L KGG   +A  + Q
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQ 716



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 206/410 (50%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +++ LC  G         D + + G   N       ++   + G    A  LL + 
Sbjct: 379 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI 438

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  MY+++++AL K     EA  +F E        D  T++ LI G   +G++
Sbjct: 439 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKL 498

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A     +M     +PD+ TY  L+  L +  +V     +L  V  K+   PDV TY +
Sbjct: 499 KEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVL-AVMLKACVKPDVFTYNT 557

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GY  + ++ KA  ++N M+  G+ P   T+ +LI+GF K   +  A  + + M    
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN 617

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD VT+SSL+DG C++G+++    L DEM+ +    +V T+  LI+ LCK   L+ A 
Sbjct: 618 MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAI 677

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++K   + P  F +  ++DG CK G + +A  +  ++  K    D   + ++I GH
Sbjct: 678 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGH 737

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +G + EA+++ +KM   GC P+ +T + +I+ L K    ++A +++++
Sbjct: 738 CKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQ 787



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 204/434 (47%), Gaps = 3/434 (0%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           R+ + +  +KFL      L+   + + YN ++ +LC+  L      +F  M   G   N 
Sbjct: 110 RIGDTRAAIKFLRKIDGRLA-KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +      GK   A GLL+      +  +   YN L++AL K+    EA  +   
Sbjct: 169 VTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAV 228

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
             +   + +  T++ L+ G   + EVKKA   F  M   G +PD+ +YN +I+G C++  
Sbjct: 229 MLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKR 288

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           V +   L KE+   S F P ++ +  ++  + K+     A  + + +   GI+P   T N
Sbjct: 289 VDKALNLFKEMIL-SRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN 346

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           +LI+ F  +G +     +  ++L  GY P  VT ++LI G C  GQ+ + L   D++  +
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 406

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
               N  ++  LIN +CK      A + L+++      P   MY+ +ID  CK   V EA
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             + +EM  K    D VT++ LI G C+ G++ EAI + N+M+     PD  T   L+  
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA 526

Query: 552 LLKGGMPNEAFRIM 565
           L K G   EA  ++
Sbjct: 527 LGKEGKVKEAKSVL 540



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 172/338 (50%), Gaps = 2/338 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           T   N+L+  L  +    EA++   +      Q +  ++  LI G+ RIG+ + A +F  
Sbjct: 63  TVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLR 122

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            +      P++  YNT+I  LC+   V+  + L  E+  K   S +VVTY+++I G+C +
Sbjct: 123 KIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKG-ISANVVTYSTLIYGFCIV 181

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           GK+ +A G+ N M    I P+  T+N+L+D   K G +  A+ +   ML      +V+T+
Sbjct: 182 GKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITY 241

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S+L+DGY    ++ +   + + M    ++P+V+++ I+IN  CK  R++ A    K++  
Sbjct: 242 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMIL 301

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           +   P    +N ++D F K  +   A  +   +E K  +PD  T  ILI   C  G++  
Sbjct: 302 SRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITF 360

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             S+  K+L+ G  P  +T+N+LI  L   G   +A  
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH 398



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 1/283 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N   +TY +++ +L + G     + V   M      P+       ++  +   +   A
Sbjct: 512 TINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKA 571

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + + +      VT     Y  L+N   K    DEA+ +FKE  +    PDT T++ L+ G
Sbjct: 572 QHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDG 631

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +   ++   +M   G   D++TYN+LI GLC+   + +   L  ++K +    P
Sbjct: 632 LCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG-IRP 690

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +  T+T ++ G CK G++  A  ++ ++ + G       +NV+I G  K G +  A  M 
Sbjct: 691 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTML 750

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +M   G +P+ VTF  +I+   +  + ++  KL  +M  + L
Sbjct: 751 SKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 124/244 (50%)

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K  + PD VT  ++I G C  G++ +A   ++++ + G + + V++  LI+G  ++G+ 
Sbjct: 55  LKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDT 114

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            +A     ++      P+V  ++++ID  C+   +++   L  EM  K +S NV T++ L
Sbjct: 115 RAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTL 174

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I   C   +L +A   L  +    + P    YN ++D  CK G V EA  ++A M +   
Sbjct: 175 IYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACV 234

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           K + +T++ L+ G+ +   + +A  +FN M  +G  PD  + N +I+   K    ++A  
Sbjct: 235 KSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALN 294

Query: 564 IMQR 567
           + + 
Sbjct: 295 LFKE 298



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 3/186 (1%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           ++L  GY PD VT ++LI G C  GQ+ + L   D++  +    N  ++  LIN +C+  
Sbjct: 53  KILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIG 112

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
               A +FL+++      P   MYN +ID  CK   V EA  + +EM  K    + VT++
Sbjct: 113 DTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYS 172

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRA 568
            LI G C+ G++ EA+ + N M+     P+  T N L+  L K G   EA     +M +A
Sbjct: 173 TLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKA 232

Query: 569 SEDQNL 574
               N+
Sbjct: 233 CVKSNV 238



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 3/243 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M     +      Q VF+ M   G  P+       ++   ++   D A  L  + 
Sbjct: 554 TYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEM 613

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP-DTWTFNILIQGLSRIGE 276
               +   T  Y+SL++ L K       V+   +  R   QP D  T+N LI GL + G 
Sbjct: 614 HQKNMVPDTVTYSSLVDGLCKSGRI-SYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH 672

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + KA   F  M   G  P+  T+  L+ GLC+   +    E+ +++  K  +  DV  Y 
Sbjct: 673 LDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG-YHLDVYIYN 731

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G+CK G +++A  + ++M   G  P+AVTF+++I+   K      AE +  +M++ 
Sbjct: 732 VMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791

Query: 397 GYL 399
           G L
Sbjct: 792 GLL 794



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 472 PFMYNPVIDGFCKAGNVDEANV--IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           PF   P I       NVD+A    ++ ++ ++   PD VT   LI G C+KG++ EA+  
Sbjct: 32  PFFLPPSIQ------NVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHF 85

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +K+L  G   + ++  +LI+ + + G    A + +++
Sbjct: 86  HDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRK 123


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 209/451 (46%), Gaps = 41/451 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            + +V+  LC     D    V +     G  P+      F+    +A + D A  LL + 
Sbjct: 43  AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 102

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +T  Y +L++ L+K    DEA+ + ++     + P   T+ ++I GLS+ G V
Sbjct: 103 DEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRV 162

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV---KFKSEFSPDVVT 334
           ++A   F DM   GC PD   Y  LISGL ++ ++      L ++          PDVV 
Sbjct: 163 EEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVI 222

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNS----------------CGIK-------------- 364
           +  VI   C  G ++ A   ++E++                 C  +              
Sbjct: 223 HNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSE 282

Query: 365 ----PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
               P+  T+  L+DGF K+G +  A    +  +  G++PD VT++S+IDG C+ G++ +
Sbjct: 283 RRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEE 342

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
           G +   EM+ +   P+  T+  LI+   K   +  A R  +Q+  +  V     YN ++D
Sbjct: 343 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 402

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CKAG V EA      MEE+ C    VT++ L+ G C +G +  A+ +F +ML  GC P
Sbjct: 403 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 462

Query: 541 DDITVNSLISCLLKGGMPNEAF----RIMQR 567
           + ++ N +I  L + G   +A+    +++QR
Sbjct: 463 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 493



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 201/407 (49%), Gaps = 10/407 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSD---GHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +NLV+R LC  G  +     FD +       H   +P+    V++  +A + + A   + 
Sbjct: 223 HNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPL----VAALCKAERTEEAIAFVK 278

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +        + F Y SL++  +K    DEA+   KE       PD  T+  +I GL ++G
Sbjct: 279 KMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLG 338

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V++  E F++M + G  PD VTY  LI G  +   + + H + +++  +S      VTY
Sbjct: 339 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM-LQSGTVVSTVTY 397

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             ++ G CK G++ +A   +  M   G   + VT++ L+DGF   GN+ +A  +  RML 
Sbjct: 398 NIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD 457

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE-NRLN 454
            G  P++V+++ +I G CR G+L +     +++  + L P+VYTF   ++ LC+  + + 
Sbjct: 458 RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVG 517

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           D     + +      P    Y+ ++DG C+AG ++    I  EM  +   PD V F  LI
Sbjct: 518 DGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLI 577

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              C+ GR+ EA+ +F ++ R   APD  +  SL+  L +     EA
Sbjct: 578 RWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEA 623



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 212/457 (46%), Gaps = 43/457 (9%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + KTY +V+  L + G  +  + +F  M  +G  P++ +    +S   + GK D A   L
Sbjct: 145 TLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYL 204

Query: 215 SQF---------RPGEVT-----------------------------MSTFMYNSLLNAL 236
           +Q           P  V                              ++ F +N L+ AL
Sbjct: 205 NQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAAL 264

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K    +EA+   K+       P  +T+  L+ G  ++G + +A     +    G  PD 
Sbjct: 265 CKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDA 324

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           VTY ++I GLC++  V  G E   E++ +  + PD VTY ++I G+ K   + KA  +Y 
Sbjct: 325 VTYTSIIDGLCKLGRVEEGCERFHEMRNRG-YEPDAVTYAALIDGFMKAKMIPKAHRVYR 383

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M   G   S VT+N+++DG  K G +  A      M   G +  VVT+S+L+DG+C  G
Sbjct: 384 QMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEG 443

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            ++  ++L   M  +   PN+ ++ I+I  LC+  +L  A  + ++L    L P  + +N
Sbjct: 444 NVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFN 503

Query: 477 PVIDGFC-KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
             + G C +   V +   +   M  +   P+  +++IL+ G C  G +   + IF++M+ 
Sbjct: 504 SFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVS 563

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRAS 569
            G APD +  N+LI  L   G  +EA   FR ++R S
Sbjct: 564 RGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS 600



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 180/382 (47%), Gaps = 42/382 (10%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           + T +  +LLN L K    D A+ +  E   +   PD   F ++I GL R   + +AF  
Sbjct: 7   VDTRVCTALLNGLCKTGQLDRAMLLLDE---MPCSPDMVAFTVVINGLCREKRLDEAFSV 63

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
                  GC PD VTYN  I GLC+   V    +LLK++  K    P  VTYT+++ G  
Sbjct: 64  LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCL-PTTVTYTALVDGLL 122

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G++D+A  I  +M   G  P+  T+ V+IDG  K G +  A  +   ML  G  PD  
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMK----GKNLSPNV---------------------- 437
            +++LI G  + G+L++ L   ++M      + + P+V                      
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 438 ------------YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
                       +TF  L+ ALCK  R  +A  F+K++      P  F Y  ++DGF K 
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +DEA + + E  E+   PD VT+T +I G C  GR+ E    F++M   G  PD +T 
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 546 NSLISCLLKGGMPNEAFRIMQR 567
            +LI   +K  M  +A R+ ++
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQ 384



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 210/467 (44%), Gaps = 43/467 (9%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +N L   KRLD        LE + V       + TYN+ +  LC+    D    +   M 
Sbjct: 48  INGLCREKRLDE---AFSVLERA-VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 103

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
               LP +      V   ++AG+ D A  +L Q      + +   Y  +++ L K    +
Sbjct: 104 EKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 163

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS----PDIV-- 297
           EA  +F +      +PD + +  LI GL++IG++ +A  +   M   GC+    PD+V  
Sbjct: 164 EARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIH 223

Query: 298 --------------------------------TYNTLISGLCRVNEVARGHELLKEVKFK 325
                                           T+N L++ LC+          +K++  +
Sbjct: 224 NLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSER 283

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             F P + TYTS++ G+ KLG++D+A     E    G  P AVT+  +IDG  K+G +  
Sbjct: 284 RCF-PTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEE 342

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
                  M + GY PD VT+++LIDG+ +   + +  ++  +M       +  T+ I+++
Sbjct: 343 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 402

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK  R+ +A      ++    V     Y+ ++DGFC  GNV  A  +   M ++ C+P
Sbjct: 403 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 462

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           + V++ I+I G C  G++ +A   F K+L+    PD  T NS +  L
Sbjct: 463 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGL 509



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 155/315 (49%), Gaps = 9/315 (2%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           DT     L+ GL + G++ +A     +M    CSPD+V +  +I+GLCR   +     +L
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E   ++   PD VTY   I G CK  ++D A  +  +M+     P+ VT+  L+DG  K
Sbjct: 65  -ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 123

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +  A  + E+M+  G  P + T++ +IDG  + G++ +  ++  +M G    P+ + 
Sbjct: 124 AGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 183

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLV----PKPFMYNPVIDGFCKAGNVDEANVIV 495
           +T LI+ L K  +L++A  +L Q+  N       P   ++N VI   C +GN+++A    
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF 243

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            E+++        TF  L+   C   R  EAI+   KM    C P   T  SL+   LK 
Sbjct: 244 DELDDS-LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 556 GMPNEAFRIMQRASE 570
           G  +EA   ++ A E
Sbjct: 303 GRLDEALLQLKEAVE 317



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 38/241 (15%)

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D    T++++G CK G++D+A  + +EM      P +                       
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEM------PCS----------------------- 38

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
                    PD+V F+ +I+G CR  +L++   + +        P+  T+ + I+ LCK 
Sbjct: 39  ---------PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKA 89

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R++DA + LK++     +P    Y  ++DG  KAG +DEA  I+ +M EK   P   T+
Sbjct: 90  ERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTY 149

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           T++I G    GR+ EA  IF  ML  GC PD     +LIS L K G  +EA   + +  E
Sbjct: 150 TVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVE 209

Query: 571 D 571
           +
Sbjct: 210 N 210



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 3/166 (1%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           L D    ++L++G C+ GQL++ + L DEM     SP++  FT++IN LC+E RL++A  
Sbjct: 6   LVDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFS 62

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L++       P    YN  IDG CKA  VD+A  ++ +M+EK+C P  VT+T L+ G  
Sbjct: 63  VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             GR+ EA++I  +M+  G +P   T   +I  L K G   EA RI
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 3/216 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ +M   C  G   +   +F  M   G  PN       +    RAGK   A     + 
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 490

Query: 218 RPGEVTMSTFMYNSLLNALVKQ-NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               +    + +NS L+ L ++ +   + V +F+      + P+  +++IL+ G+ R G 
Sbjct: 491 LQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 550

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++   E F++M S G +PD+V +NTLI  LC    V    E+ +E++ +S  +PD  +Y 
Sbjct: 551 LEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS--APDAWSYW 608

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
           S++    +  +M++A  +   M   G  P      V
Sbjct: 609 SLLDALSRCERMEEARLLSFHMKLQGCAPRHYDLTV 644



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 3/133 (2%)

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           T L+N LCK  +L+ A   L ++  +   P    +  VI+G C+   +DEA  ++     
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
             C+PD VT+ + I G C   R+ +A  +  KM    C P  +T  +L+  LLK G  +E
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 561 AFRIMQRASEDQN 573
           A  I+++  E  N
Sbjct: 130 AMAILEQMVEKGN 142



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 3/99 (3%)

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
             +++G CK G +D A +++ EM    C PD V FT++I G C + R+ EA S+  + +R
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            GC PD +T N  I  L K    ++AF+++++  E + L
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCL 108


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 191/355 (53%), Gaps = 6/355 (1%)

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            FRP  VT+      SLLN   + N   EAV +          P+   +N +I GL +  +
Sbjct: 670  FRPSIVTLG-----SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            +  A E FY M   G   D VTYNTLISGL           LL+++  K +  P+V+ +T
Sbjct: 725  LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFT 783

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++I  + K G + +A  +Y EM    + P+  T+N LI+GF   G +  A+YM + M+S 
Sbjct: 784  ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            G  PDVVT+++LI G+C++ ++  G+KL  EM  + L  + +T+  LI+  C+  +LN A
Sbjct: 844  GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 903

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            ++   ++    + P    YN ++D  C  G +++A V+V ++++     D +T+ I+I G
Sbjct: 904  QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 963

Query: 517  HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             C   ++ EA  +F  + R G  PD I   ++IS L + G+  EA ++ +R  ED
Sbjct: 964  LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 1018



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 169/361 (46%), Gaps = 1/361 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L  +        S   +  +L  + K N  D  +Y++ +   L    D ++F 
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ILI    R   +  A      M   G  P IVT  +L++G C+ N       L+  +   
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD-G 702

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             F P+VV Y +VI+G CK   ++ A  ++  M   GI+  AVT+N LI G    G    
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   M+     P+V+ F++LID + + G L +   L  EM  +++ PNV+T+  LIN
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C    L DA+     +      P    YN +I GFCK+  V++   +  EM  +    
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  T+  LI G+C  G++  A  +FN+M+  G +PD +T N L+ CL   G   +A  ++
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 942

Query: 566 Q 566
           +
Sbjct: 943 E 943



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 156/295 (52%), Gaps = 7/295 (2%)

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF---SPDVVT 334
           + AF  F++M      P IV +  L++    +    R +E +     K E    S D+ +
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANL----RRYETVIYFSQKMELYGISHDLYS 108

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +T +I  +C+  ++  A  +  +M   G +PS VTF  L+ GF  V  +  A  +   M+
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             GY P+VV +++LIDG C+NG+LN  L+L +EM+ K L  +V T+  L+  LC   R +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA R L+ +    + P    +  +ID F K GN+DEA  +  EM +    P+ VT+  +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            G CM GR+ +A   F+ M   GC P+ +T N+LIS   K  M +E  ++ QR S
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 156/330 (47%), Gaps = 8/330 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +  LL A       +  +Y F +   LY    D ++F ILI    R   +  A      M
Sbjct: 74  FTRLLTATANLRRYETVIY-FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKM 132

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  P IVT+ +L+ G C VN +     L+  +  KS + P+VV Y ++I G CK G+
Sbjct: 133 MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI-LMVKSGYEPNVVVYNTLIDGLCKNGE 191

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           ++ A  + NEM   G+    VT+N L+ G    G    A  M   M+     PDVVTF++
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LID + + G L++  +L  EM   ++ PN  T+  +IN LC   RL DA++    +    
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    YN +I GFCK   VDE   +   M  +    D  T+  LI G+C  G++  A+
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
            IF  M+     PD IT      C+L  G+
Sbjct: 372 DIFCWMVSRRVTPDIIT-----HCILLHGL 396



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 1/347 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   + SLL+     N   +A  +     +   +P+   +N LI GL + GE+  A E  
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELL 199

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G   D+VTYNTL++GLC     +    +L+++  K   +PDVVT+T++I  + K
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM-MKRSINPDVVTFTALIDVFVK 258

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G +D+A  +Y EM    + P+ VT+N +I+G    G +  A+   + M S G  P+VVT
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LI G+C+   +++G+KL   M  +  + +++T+  LI+  C+  +L  A      + 
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    +  ++ G C  G ++ A V   +M E       V + I+I G C   ++ 
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +A  +F ++   G  PD  T   +I  L K G   EA  +++R  E+
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 167/346 (48%), Gaps = 1/346 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           ++   + +  L++   + +    A+ +  +  +L  +P   TF  L+ G   +  +  AF
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                M   G  P++V YNTLI GLC+  E+    ELL E++ K     DVVTY ++++G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME-KKGLGADVVTYNTLLTG 220

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C  G+   A  +  +M    I P  VTF  LID F K GN+  A+ + + M+     P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            VT++S+I+G C +G+L    K  D M  K   PNV T+  LI+  CK   +++  +  +
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++         F YN +I G+C+ G +  A  I   M  +R  PD +T  IL+ G C+ G
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +  A+  F+ M         +  N +I  L K     +A+ +  R
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 160/321 (49%), Gaps = 1/321 (0%)

Query: 159  YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            YN V+  LC+    ++   VF  M   G   ++      +S    +G+   A  LL    
Sbjct: 712  YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 771

Query: 219  PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++  +   + +L++  VK+ N  EA  ++KE  R    P+ +T+N LI G    G + 
Sbjct: 772  KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 831

Query: 279  KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
             A   F  M S GC PD+VTYNTLI+G C+   V  G +L  E+ ++     D  TY ++
Sbjct: 832  DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG-LVGDAFTYNTL 890

Query: 339  ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
            I GYC+ GK++ A  ++N M  CG+ P  VT+N+L+D     G +  A  M E +     
Sbjct: 891  IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 950

Query: 399  LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
              D++T++ +I G CR  +L +   L   +  K + P+   +  +I+ LC++    +A +
Sbjct: 951  DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 1010

Query: 459  FLKQLKWNDLVPKPFMYNPVI 479
              +++K +  +P   +Y+  +
Sbjct: 1011 LCRRMKEDGFMPSERIYDETL 1031



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 9/316 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++  LC+ G  +    + + M   G   +       ++    +G+   A  +L   
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      + +L++  VKQ N DEA  ++KE  +    P+  T+N +I GL   G +
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M S GC P++VTYNTLISG C+   V  G +L + +  +  F+ D+ TY +
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG-FNADIFTYNT 356

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA----EYMRERM 393
           +I GYC++GK+  A  I+  M S  + P  +T  +L+ G    G + SA    + MRE  
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G    +V ++ +I G C+  ++ +  +L   +  + + P+  T+TI+I  LCK    
Sbjct: 417 KYIG----IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 454 NDARRFLKQLKWNDLV 469
            +A   ++++K   ++
Sbjct: 473 READELIRRMKEEGII 488



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 3/237 (1%)

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +G+    + + A  ++ EM      PS V F  L+     +    +  Y  ++M  +G  
Sbjct: 44  TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            D+ +F+ LI  +CR  +L+  L +  +M      P++ TF  L++  C  NR+ DA   
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           +  +  +   P   +YN +IDG CK G ++ A  ++ EME+K    D VT+  L+ G C 
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
            GR  +A  +   M++    PD +T  +LI   +K G  +EA   ++ M ++S D N
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 60/143 (41%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYN ++   C+ G  +  Q VF+ M   G  P+       +      GK + A  ++   
Sbjct: 886  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            +  E+ +    YN ++  L + +   EA  +F+   R   +PD   +  +I GL R G  
Sbjct: 946  QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 1005

Query: 278  KKAFEFFYDMGSFGCSPDIVTYN 300
            ++A +    M   G  P    Y+
Sbjct: 1006 READKLCRRMKEDGFMPSERIYD 1028


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 217/479 (45%), Gaps = 44/479 (9%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDY 181
           +NSL  + R+D       F   +++ L L H     T+  ++R LC  G       +FD 
Sbjct: 112 INSLCHLNRVD-----FAFSALAKI-LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 165

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M  +G  PN       ++   + G   AA  LL     G    +  ++++L+++L K   
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
             EA  +F E       P+  T+N LI GL ++ E K       +M      PD+ T NT
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT------------------------- 336
           ++  LC+   VA  H+++ ++       P+VVTY                          
Sbjct: 286 VVDALCKEGMVAEAHDVV-DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 344

Query: 337 ----------SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
                     ++I+GYCK+  +DKA  ++ EM+   + P+ VT+N LI G   VG +  A
Sbjct: 345 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   M++ G +PD+VT+ +L D  C+N  L++ + L   ++G N  P++  +T +++ 
Sbjct: 405 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 464

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           +C+   L DAR     L    L P  + YN +I G CK G + EA+ + +EM +  C P+
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             T+ ++  G       +  I +  +ML  G + D  T   L+  L   G+     +I+
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 219/453 (48%), Gaps = 49/453 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T  +V+ SLC +   D        +   GH P++      +      GK   A  L  + 
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P  VT     Y +L+N L K  N   A+ + +   +   QP+   F+ LI  L 
Sbjct: 167 IGEGFQPNVVT-----YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLC 221

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +  +V +AF  F +M + G SP+IVTYN+LI GLC++ E      L+ E+   S+  PDV
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM-VDSKIMPDV 280

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T  +V+   CK G + +A  + + M   G++P+ VT+N L+DG      +  A  + + 
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+    + +V+++++LI+GYC+   +++ + L +EM  + L+PN  T+  LI+ LC   R
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 453 LND-----------------------------------ARRFLKQLKWNDLVPKPFMYNP 477
           L D                                   A   LK ++ ++  P   +Y  
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++DG C+AG +++A  + + +  K  +P+  T+ I+I G C +G + EA  +F++M + G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C+P+D T N +    L+    NEA R ++   E
Sbjct: 521 CSPNDCTYNLITRGFLRN---NEALRTIELLEE 550



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 183/342 (53%), Gaps = 2/342 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           ++N+L   N  D A     +  +L  QPD  TF  LI+GL   G++ +A   F  M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P++VTY TLI+GLC+V   +    LL+ ++ +    P+VV ++++I   CK  ++ +A
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSME-QGNCQPNVVVFSTLIDSLCKDRQVTEA 229

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             I++EM + GI P+ VT+N LI G  K+        +   M+    +PDV T ++++D 
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G + +   + D M  + + PNV T+  L++  C  N ++ A +    +   D V  
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I+G+CK  +VD+A  +  EM  +   P+ VT+  LI G C  GR+ +AIS+F+
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           +M+  G  PD +T  +L   L K    ++A  ++ +A E  N
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-KAIEGSN 450



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 173/344 (50%), Gaps = 1/344 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+  +  +  N  DEA+  F         P T  FN L+  +++             M 
Sbjct: 38  HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 97

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           SFG  PD+ T   +I+ LC +N V      L ++  K    PD  T+T++I G C  GK+
Sbjct: 98  SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKI-LKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  ++++M   G +P+ VT+  LI+G  KVGN  +A  +   M      P+VV FS+L
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID  C++ Q+ +   +  EM  K +SPN+ T+  LI+ LCK          + ++  + +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P  F  N V+D  CK G V EA+ +V  M  +  +P+ VT+  L+ GHC++  +  A+ 
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +F+ M+   C  + I+ N+LI+   K    ++A  + +  S  +
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 199/384 (51%), Gaps = 4/384 (1%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P IEF   + S +++        L  +     +  +    N L+N   +      A 
Sbjct: 83  PTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAF 142

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F +  ++   P+T TF  LI+GL   G++ +A  F   + + G   + ++Y TLI GL
Sbjct: 143 SVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGL 202

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+V E     +LL+ V  K    P+VV Y+++I G CK   ++ A  +Y+EM S GI P+
Sbjct: 203 CKVGETRAALDLLRRVDGKL-VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN 261

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT++ LI GF  VG +  A  +  +M+S    PDV TF+ L+D +C++G+++  LKL D
Sbjct: 262 VVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVD 321

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM  +   PN+ T++ +++ALCK +R++ A   L +LK   + P    Y  +IDG C +G
Sbjct: 322 EMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSG 381

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +++A  I  ++  K      VT+ ++  G C KG   EA ++ +KM   GC PD  T  
Sbjct: 382 KLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYE 441

Query: 547 SLISCLLKGGMPNEAFRIMQRASE 570
            +   L K G  N+    + R  E
Sbjct: 442 LIKLSLFKKG-ENDMAEKLHRECE 464



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 187/364 (51%), Gaps = 1/364 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++ SL +   + +V  +   M   G  PN       ++   + G    A  + ++  
Sbjct: 90  FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 149

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +T  + +L+  L  +    +A+    +   L  Q +  ++  LI GL ++GE +
Sbjct: 150 KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETR 209

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A +    +      P++V Y+T+I G+C+   V    +L  E+  K   SP+VVTY+++
Sbjct: 210 AALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG-ISPNVVTYSAL 268

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ISG+  +GK+  A  ++N+M S  IKP   TFN+L+D F K G +  A  + + M   G 
Sbjct: 269 ISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQ 328

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P++VT+SS++D  C+  ++++ + L  ++K + + PN++T+TILI+ LC   +L DAR 
Sbjct: 329 PPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARN 388

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + L           Y  +  GFCK G  DEA+ ++++MEE  C PD  T+ ++ +   
Sbjct: 389 IFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLF 448

Query: 519 MKGR 522
            KG 
Sbjct: 449 KKGE 452



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 190/349 (54%), Gaps = 13/349 (3%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N +L +LVK  +    +Y+ K+      +P+    NILI    ++G +  AF  F  + 
Sbjct: 90  FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 149

Query: 289 SFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
             G +P+ +T+ TLI GLC   ++++    H+ L  + F+     + ++Y ++I G CK+
Sbjct: 150 KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQF----NQISYGTLIDGLCKV 205

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G+   A  +   ++   ++P+ V ++ +IDG  K  ++  A  +   M+S G  P+VVT+
Sbjct: 206 GETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 265

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S+LI G+   G+L   + L ++M  +N+ P+VYTF IL++  CK  +++ A + + ++  
Sbjct: 266 SALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHD 325

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    Y+ ++D  CK   VD+A  ++ +++++  +P+  T+TILI G C  G++ +
Sbjct: 326 RGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLED 385

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLL---KGGMPNEAFRIMQRASED 571
           A +IF  +L  G    DITV + I       K G+ +EA  ++ +  E+
Sbjct: 386 ARNIFEDLLVKGY---DITVVTYIVMFYGFCKKGLFDEASALLSKMEEN 431



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 155/340 (45%), Gaps = 1/340 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N+++   C++GL      VF  +   G+ PN+      +      G+   A     +   
Sbjct: 126 NILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA 185

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
                +   Y +L++ L K      A+ + +       QP+   ++ +I G+ +   V  
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           AF+ + +M S G SP++VTY+ LISG   V ++    +L  ++       PDV T+  ++
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKM-ISENIKPDVYTFNILV 304

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
             +CK GK+  A  + +EM+  G  P+ VT++ ++D   K   +  A  +  ++   G  
Sbjct: 305 DVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIR 364

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P++ T++ LIDG C +G+L     + +++  K     V T+ ++    CK+   ++A   
Sbjct: 365 PNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASAL 424

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           L +++ N  +P    Y  +     K G  D A  +  E E
Sbjct: 425 LSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECE 464



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 123/275 (44%), Gaps = 35/275 (12%)

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +++ Y+S  + +     +D A  ++N +      P A+ FN ++    K  +  +  Y+ 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           ++M   G  P++V  + LI+ +C+ G +     +  ++     +PN  TFT LI  LC +
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 451 NRLNDARRF----------LKQLKWNDLV-------------------------PKPFMY 475
            +++ A  F            Q+ +  L+                         P   MY
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           + +IDG CK  +V++A  + +EM  K   P+ VT++ LI G    G++ +A+ +FNKM+ 
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
               PD  T N L+    K G  + A +++    +
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHD 325



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 90/179 (50%), Gaps = 6/179 (3%)

Query: 396 FGYLP------DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           F ++P      +++ +SS    +  N  ++  + L + +  +N +P    F  ++ +L K
Sbjct: 40  FNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVK 99

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               +      K++++  + P     N +I+ FC+ G +  A  + A++ +    P+ +T
Sbjct: 100 SKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTIT 159

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           FT LI G C+KG++ +A++  +K++ +G   + I+  +LI  L K G    A  +++R 
Sbjct: 160 FTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV 218



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 3/201 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY+ ++     +G L D+V + F+ M S+   P+       V    ++GK   A  L+ +
Sbjct: 264 TYSALISGFFTVGKLKDAVDL-FNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDE 322

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y+S+L+AL K +  D+AV +  +      +P+  T+ ILI GL   G+
Sbjct: 323 MHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGK 382

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++ A   F D+   G    +VTY  +  G C+         LL +++ ++   PD  TY 
Sbjct: 383 LEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKME-ENGCIPDAKTYE 441

Query: 337 SVISGYCKLGKMDKATGIYNE 357
            +     K G+ D A  ++ E
Sbjct: 442 LIKLSLFKKGENDMAEKLHRE 462


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 210/453 (46%), Gaps = 46/453 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C  G+ D    +   M   G+ PN       +     A K D A  +L   
Sbjct: 254 TYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETM 313

Query: 218 R-----PGEVTMSTFMY------------------------------NSLLNALVKQNNA 242
           +     P E T+ +F++                              ++LL  L  +N A
Sbjct: 314 KARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMA 373

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNI----LIQGLSRIGEVKKAFEFFYDMG-SFGCSPDIV 297
            EA  + K++ ++  +PD+ TFNI    LI+G   + EV    + F + G  FG S    
Sbjct: 374 REAGALLKKFGKIGHKPDSATFNIAMNCLIKGFD-LNEVCNILDRFVEQGMKFGFS---- 428

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY  LI  L    +V  G+    ++  K     +V +Y  VI  +CK   MDKAT  + E
Sbjct: 429 TYLALIKALYMAGKVTEGNHYFNQM-VKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKE 487

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   GI P+ VTFN LIDG+ K G +  +  +   +L  G+ PD+ TFSS+IDG CR  Q
Sbjct: 488 MQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQ 547

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +   L    EM    LSPN  T+ ILI++LC    +  + + L++++ + + P  F +N 
Sbjct: 548 IEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNA 607

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I  FC+ G V++A  + + M      PD  T+   I   C  GR  EA  +F  M   G
Sbjct: 608 LIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANG 667

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C PD  T N ++  L+K      A +I +  SE
Sbjct: 668 CMPDSFTCNIILDALVKQDQFEAAQKIAKTCSE 700



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 242/542 (44%), Gaps = 63/542 (11%)

Query: 73  ANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKR 132
           AN  S+P D    +   S   WF      LLL   + +          L+  +   V++ 
Sbjct: 75  ANKYSKPIDHHYFSRILSRHDWF------LLLNHEFKAKRIT------LNSHSVASVLQN 122

Query: 133 LDNPKLGLKF-LEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPN 190
            +NP   LKF +  S ++           ++   L   G +  SV+++ D +++ G+  N
Sbjct: 123 QENPLYPLKFYIWVSNMDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKD-IKASGYRIN 181

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             ++   + S  R G       +  Q     ++ ST +YN++++ALVK N+ D A   F+
Sbjct: 182 EELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQ 241

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           +      +PD +T+NILI G+ R G V +A      M   G SP++ TY  LI G     
Sbjct: 242 QMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAK 301

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISG----------------------------- 341
           +V     +L+ +K + + SP   T  S I G                             
Sbjct: 302 KVDEAFRVLETMKAR-KVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLAC 360

Query: 342 ---YCKLGKMD---KATGIYNEMNSCGIKPSAVTFNV----LIDGF--GKVGNMVSAEYM 389
               C L   +   +A  +  +    G KP + TFN+    LI GF   +V N++  +  
Sbjct: 361 DTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNIL--DRF 418

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E+ + FG+     T+ +LI      G++ +G    ++M    L  NV ++ ++I+  CK
Sbjct: 419 VEQGMKFGF----STYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCK 474

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            + ++ A    K++++  + P    +N +IDG+CK G + ++  ++  + E   KPD  T
Sbjct: 475 TSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFT 534

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           F+ +I G C   ++ +A+  F++M+  G +P+ +T N LI  L   G    + +++++  
Sbjct: 535 FSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQ 594

Query: 570 ED 571
            D
Sbjct: 595 TD 596



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 1/249 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+   C+  + D     F  M+  G  PN       +    + G+   ++ LL   
Sbjct: 464 SYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVML 523

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                    F ++S+++ L +    ++A+  F E       P+  T+NILI  L  IG+V
Sbjct: 524 LEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDV 583

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++ +    M + G +PD+ ++N LI   CR+ +V    +L   +       PD  TY +
Sbjct: 584 PRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSM-LSLGLIPDNYTYVA 642

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I  +C+ G+ ++A  ++  M + G  P + T N+++D   K     +A+ + +    +G
Sbjct: 643 FIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWG 702

Query: 398 YLPDVVTFS 406
            L +    S
Sbjct: 703 ILVNFAAIS 711



 Score = 42.0 bits (97), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 47/94 (50%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N    ++N +++S C MG  +  + +F  M S G +P++     F+    ++G+ + AK
Sbjct: 598 INPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAK 657

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
            L            +F  N +L+ALVKQ+  + A
Sbjct: 658 ELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 180/312 (57%), Gaps = 1/312 (0%)

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
           Y+ PD  T+  +++ L +   +  A     +M + G  PD   YN ++SGLC+  +V   
Sbjct: 4   YAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA 63

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             LL E   K   +P+VVTY ++I+G CK  +++ A  ++ EM   G  P+ V++N LID
Sbjct: 64  R-LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           GF K  ++V+A+ + ++M+    +P+VVT+++LIDG  ++G++    ++ D M  K ++P
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 182

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV T++ LI+  CK  R+++A + L+Q+    + P    YN +++  C+A  +++A  + 
Sbjct: 183 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 242

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             M ++RC P  VT+  L+   C   ++  A  ++ +M+  GC PD IT ++L   L + 
Sbjct: 243 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 302

Query: 556 GMPNEAFRIMQR 567
           G  +EA  +M++
Sbjct: 303 GKVHEAQELMEK 314



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 167/307 (54%), Gaps = 1/307 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
             Y  ++  L K    D+A+   +E      +PD + +N ++ GL +  +V++A   F  
Sbjct: 10  LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 69

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M     +P++VTYNTLI+GLC+   +   +EL KE+  K  + P  V+Y ++I G+CK  
Sbjct: 70  MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG-YVPTEVSYNTLIDGFCKKK 128

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +  A  ++++M      P+ VT+  LIDG  K G + +A  + + M+  G  P+V T+S
Sbjct: 129 DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYS 188

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LIDG+C+  ++++  KL ++M  + ++P V T+ IL+N+LC+ ++L DA +  + +   
Sbjct: 189 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 248

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    YN ++   C    +D A+ + AEM  K C PD +T+  L  G    G++ EA
Sbjct: 249 RCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEA 308

Query: 527 ISIFNKM 533
             +  KM
Sbjct: 309 QELMEKM 315



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 160/317 (50%), Gaps = 1/317 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++      V    +  + D A   + +     +    F+YN +L+ L ++   +EA  +
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F++  +    P+  T+N LI GL +   ++ A+E F +M   G  P  V+YNTLI G C+
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             ++    ++  ++  +S   P+VVTYT++I G  K GK+  A  + + M   G+ P+  
Sbjct: 127 KKDLVAAKDVFDKM-VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T++ LIDGF KV  +  A  + E+M++ G  P VVT++ L++  CR  +L    KL   M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             +   P V T+  L+ ALC   +L+ A R   ++      P    Y+ +  G  +AG V
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305

Query: 489 DEANVIVAEMEEKRCKP 505
            EA  ++ +M+  +  P
Sbjct: 306 HEAQELMEKMKLTKRNP 322



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 1/313 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+    D      + M + G  P++ +  F +S   +  K + A+ L  + 
Sbjct: 11  TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 70

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN+L+N L K    + A  +FKE       P   ++N LI G  +  ++
Sbjct: 71  VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 130

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M    C P++VTY TLI GL +  +V    E+L  +  K   +P+V TY+ 
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM-VKKGVTPNVATYSC 189

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK+ ++D+A  +  +M + GI P+ VT+N+L++   +   +  A  +   M    
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT+++L+   C + QL+   +L  EM  K   P+  T+  L   L +  ++++A+
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309

Query: 458 RFLKQLKWNDLVP 470
             ++++K     P
Sbjct: 310 ELMEKMKLTKRNP 322



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 1/246 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   +N +  TYN ++  LC+    ++   +F  M   G++P        +    +    
Sbjct: 71  VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 130

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            AAK +  +        +   Y +L++ L K      A  +     +    P+  T++ L
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 190

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  ++  V +A +    M + G +P +VTYN L++ LCR +++    +L + +  +  
Sbjct: 191 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA-QRR 249

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P VVTY +++   C   ++D A  +Y EM + G  P A+T++ L  G  + G +  A+
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309

Query: 388 YMRERM 393
            + E+M
Sbjct: 310 ELMEKM 315


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 189/358 (52%), Gaps = 3/358 (0%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P+IEF   +SS +R  K +    L  +     +  +    + L+N     ++ D   
Sbjct: 36  PQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGF 95

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F +  +   +PD   F  LI G+ RIG+ + A     +MG  GC PD+VT N+L+ G 
Sbjct: 96  SVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGY 155

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C   ++ +  ++   +  K    PDV +Y+  I+GYCK+ K+D+A  +++EM+  G+ P+
Sbjct: 156 CSQGKIDKVRKIFHLMVSKG-LKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPN 214

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           AVT+N LI    +      A+ +  +M + G  PD++ +S+L+DG+C+ G L++ L L  
Sbjct: 215 AVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQ 274

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM+ + + P++  +TI+IN +C+  ++ DA+  L +L    L P    Y  ++DG C+ G
Sbjct: 275 EMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREG 334

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           ++ EA  +  +MEE  C P   ++ +L+ G          + + ++M   G   D +T
Sbjct: 335 SIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVT 392



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 175/332 (52%), Gaps = 1/332 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
            N D+A+  F        QP    FN L+  + R+ + +     F +M   G   ++ T 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + LI+  C ++ V  G  +  +   K  F PDVV +T++I G C++GK + A G+  EM 
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKT-LKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG 137

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  P  VT N L+ G+   G +     +   M+S G  PDV ++S  I+GYC+  +++
Sbjct: 138 LVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKID 197

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + ++L DEM  + + PN  T+  LI ALC+  R  DA+   +++    L P    Y+ ++
Sbjct: 198 EAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLL 257

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DGFCK GN+DE  V+  EM+ +  KPD V +TI+I G C   ++ +A  + ++++  G  
Sbjct: 258 DGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLK 317

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           PD  T  +L+  L + G   EA R+ ++  ED
Sbjct: 318 PDVHTYTALVDGLCREGSIIEALRLFRKMEED 349



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 172/326 (52%), Gaps = 1/326 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N LL+++V+    +  V +FKE      + +  T +ILI     +  V   F  F    
Sbjct: 43  FNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTL 102

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD+V + TLI G+CR+ +      LLKE+       PDVVT  S++ GYC  GK+
Sbjct: 103 KRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG-CVPDVVTCNSLMRGYCSQGKI 161

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           DK   I++ M S G+KP   ++++ I+G+ KV  +  A  + + M   G +P+ VT+++L
Sbjct: 162 DKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTL 221

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I   C+  +      L  +M    LSP++  ++ L++  CK+  L++     ++++   +
Sbjct: 222 IKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLV 281

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P   +Y  +I+G C++  V +A  +++ +  +  KPD  T+T L+ G C +G ++EA+ 
Sbjct: 282 KPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALR 341

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLK 554
           +F KM   GC P   + N L+   L+
Sbjct: 342 LFRKMEEDGCMPGSCSYNVLLQGCLQ 367



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 1/253 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +MR  C  G  D V+ +F  M S G  P+      F++   +  K D A  L  + 
Sbjct: 147 TCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEM 206

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN+L+ AL +     +A  +F++       PD   ++ L+ G  + G +
Sbjct: 207 SHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNL 266

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +    F +M      PD+V Y  +I+G+CR  +V    E+L  +  +    PDV TYT+
Sbjct: 267 DEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEG-LKPDVHTYTA 325

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C+ G + +A  ++ +M   G  P + ++NVL+ G  +  +  +   +   M   G
Sbjct: 326 LVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRG 385

Query: 398 YLPDVVTFSSLID 410
           +  D VT + L D
Sbjct: 386 FYADAVTRTFLKD 398



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 1/228 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  L     +Y++ +   C++   D    +FD M   G +PN+      + +  +A + 
Sbjct: 172 VSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRP 231

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A+ L  +     ++     Y++LL+   KQ N DE + +F+E  R   +PD   + I+
Sbjct: 232 RDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTII 291

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G+ R  +VK A E    +   G  PD+ TY  L+ GLCR   +     L ++++ +  
Sbjct: 292 INGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKME-EDG 350

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             P   +Y  ++ G  +         + +EM   G    AVT   L D
Sbjct: 351 CMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKD 398



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 38/226 (16%)

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
           G  GN+  A     RML     P ++ F+ L+    R  +    + L  EM+ + +  NV
Sbjct: 16  GYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNV 75

Query: 438 YTFTILIN-----------------------------------ALCKENRLNDARRFLKQ 462
            T +ILIN                                    +C+  +   A   LK+
Sbjct: 76  CTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKE 135

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +     VP     N ++ G+C  G +D+   I   M  K  KPD  +++I I G+C   +
Sbjct: 136 MGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEK 195

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIM 565
           + EA+ +F++M   G  P+ +T N+LI  L +   P +A   FR M
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKM 241


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 214/416 (51%), Gaps = 46/416 (11%)

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           DG   + P +    S+ +R         L S+ +   + +ST   + LL+AL     +  
Sbjct: 84  DGAPSSLPNLLLTASAAVRPHATSLR--LYSRMKSLSLPISTASLHPLLSAL----PSAP 137

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  +F + FRL     T TFNI+++ L   G+  +A E    M      P+ VTYNT+I+
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIA 193

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-I 363
           G C    V    ++++E++ +   +P+  TY +VISG+CK+G++D+A  +++EM + G +
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP AV +N LI G+   G + +A   R+RM+  G    V T++ L+     +G+  +  +
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRL--------NDARRFLK-------------- 461
           L +EM GK L+ +V+T+ ILIN  CKE  +        N +RR ++              
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 462 ---QLKWND----------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              Q++  D          + P   +YN +I+    +GN+D A  I+ EME+KR  PD V
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T+  L+ G C+ GR+ EA  + ++M + G  PD +T N+LIS     G   +A RI
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRI 489



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 212/435 (48%), Gaps = 18/435 (4%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F +  R+ L L  +  T+N+++R LC  G       +   M      PN+      ++  
Sbjct: 142 FADMFRLRLPLCTT--TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGF 195

Query: 202 IRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQP 259
              G+  AA  ++ + R  G +  + + Y ++++   K    DEAV +F E   +   +P
Sbjct: 196 CSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKP 255

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +   +N LI G    G++  A  +   M   G +  + TYN L+  L         +EL+
Sbjct: 256 EAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELV 315

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  K   + DV TY  +I+G+CK G + KA  I+  M+  G++ + VT+  LI    K
Sbjct: 316 EEMGGKG-LALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 374

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + + +  +  G  PD+V +++LI+ +  +G +++  ++  EM+ K ++P+  T
Sbjct: 375 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 434

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L+  LC   R+++AR+ + ++    + P    YN +I G+   G+V +A  I  EM 
Sbjct: 435 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 494

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K   P  +T+  LI G C  G+  +A ++  +M+  G  PDD T  SLI      G+  
Sbjct: 495 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE-----GLTT 549

Query: 560 EAFRIMQRASEDQNL 574
           E     +RA +D+ L
Sbjct: 550 ED----ERAIDDERL 560


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 191/355 (53%), Gaps = 6/355 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           FRP  VT+      SLLN   + N   EAV +          P+   +N +I GL +  +
Sbjct: 145 FRPSIVTLG-----SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A E FY M   G   D VTYNTLISGL           LL+++  K +  P+V+ +T
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFT 258

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I  + K G + +A  +Y EM    + P+  T+N LI+GF   G +  A+YM + M+S 
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDVVT+++LI G+C++ ++  G+KL  EM  + L  + +T+  LI+  C+  +LN A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++   ++    + P    YN ++D  C  G +++A V+V ++++     D +T+ I+I G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            C   ++ EA  +F  + R G  PD I   ++IS L + G+  EA ++ +R  ED
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 169/361 (46%), Gaps = 1/361 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A  L  +        S   +  +L  + K N  D  +Y++ +   L    D ++F 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ILI    R   +  A      M   G  P IVT  +L++G C+ N       L+  +   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD-G 177

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             F P+VV Y +VI+G CK   ++ A  ++  M   GI+  AVT+N LI G    G    
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   M+     P+V+ F++LID + + G L +   L  EM  +++ PNV+T+  LIN
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C    L DA+     +      P    YN +I GFCK+  V++   +  EM  +    
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  T+  LI G+C  G++  A  +FN+M+  G +PD +T N L+ CL   G   +A  ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417

Query: 566 Q 566
           +
Sbjct: 418 E 418



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 160/321 (49%), Gaps = 1/321 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN V+  LC+    ++   VF  M   G   ++      +S    +G+   A  LL    
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++  +   + +L++  VK+ N  EA  ++KE  R    P+ +T+N LI G    G + 
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   F  M S GC PD+VTYNTLI+G C+   V  G +L  E+ ++     D  TY ++
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG-LVGDAFTYNTL 365

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYC+ GK++ A  ++N M  CG+ P  VT+N+L+D     G +  A  M E +     
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             D++T++ +I G CR  +L +   L   +  K + P+   +  +I+ LC++    +A +
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485

Query: 459 FLKQLKWNDLVPKPFMYNPVI 479
             +++K +  +P   +Y+  +
Sbjct: 486 LCRRMKEDGFMPSERIYDETL 506



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 60/143 (41%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  +  Q VF+ M   G  P+       +      GK + A  ++   
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +  E+ +    YN ++  L + +   EA  +F+   R   +PD   +  +I GL R G  
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480

Query: 278 KKAFEFFYDMGSFGCSPDIVTYN 300
           ++A +    M   G  P    Y+
Sbjct: 481 READKLCRRMKEDGFMPSERIYD 503


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 210/419 (50%), Gaps = 11/419 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY-----MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           T N+++   C MG     Q+ F +     +   G+ P++      +      G+ + A  
Sbjct: 96  TLNILINCFCHMG-----QITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALH 150

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              +     +      Y +L+N + K  +   A+ + ++     ++P+   +N +I  L 
Sbjct: 151 FHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC 210

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   V +A+  F +M + G S D+VTY TLI G C  +++     LL E+  K+  +P+V
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT-INPNV 269

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  ++   CK GK+ +A  +   M    +KP  +T++ L+DG+  V  +  A+++   
Sbjct: 270 YTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNA 329

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PDV +++ LI+G+C+N  +++ L L  EM  KN+ P + T++ LI+ LCK  R
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++     + +++   +      YN +IDG CK G++D A  +  +M+++  +P   TFTI
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTI 449

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           L+ G C  GR+ +A   F  +L  G   D    N +I+   K G+  EA  ++ +  E+
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEEN 508



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 189/359 (52%), Gaps = 5/359 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +Y  ++  +C++G  D+   +    + DG L  PN  M    + +  +      A GL S
Sbjct: 166 SYGTLINGVCKIG--DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFS 223

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     ++     Y +L+      +   EA+ +  E       P+ +T+NIL+  L + G
Sbjct: 224 EMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +VK+A      M      PD++TY+TL+ G   V E+ +   +   +      +PDV +Y
Sbjct: 284 KVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG-VTPDVHSY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I+G+CK   +D+A  ++ EM+   + P  VT++ LIDG  K G +     + + M  
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   +V+T++SLIDG C+NG L++ + L ++MK + + P  +TFTIL++ LCK  RL D
Sbjct: 403 RGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKD 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           A+   + L         + YN +I+G CK G ++EA  ++++MEE  C P+ VTF I+I
Sbjct: 463 AQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIII 521



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 207/410 (50%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +++ LC  G  +      D + + G   +       ++   + G    A  L+ + 
Sbjct: 131 TFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI 190

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  MYN++++AL K     EA  +F E        D  T+  LI G     ++
Sbjct: 191 DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL 250

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A     +M     +P++ TYN L+  LC+  +V     +L  V  K+   PDV+TY++
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVL-AVMLKACVKPDVITYST 309

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY  + ++ KA  ++N M+  G+ P   ++ +LI+GF K   +  A  + + M    
Sbjct: 310 LMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P +VT+SSLIDG C++G+++    L DEM+ + +  NV T+  LI+ LCK   L+ A 
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAI 429

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++K   + P  F +  ++DG CK G + +A     ++  K    D   + ++I GH
Sbjct: 430 ALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGH 489

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C +G + EA+++ +KM   GC P+ +T + +I+ L K    ++A +++++
Sbjct: 490 CKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQ 539



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 176/350 (50%), Gaps = 5/350 (1%)

Query: 225 STFMYNSLLNALVKQ----NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           S+F+ NS  +    Q     N D+AV  F     +   P    FN ++   ++I     A
Sbjct: 19  SSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTA 78

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
               + +   G  PD++T N LI+  C + ++  G  +L ++  K  + P  +T+T++I 
Sbjct: 79  VSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI-LKRGYQPHTITFTTLIK 137

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G C  G+++KA   ++++ + GIK   V++  LI+G  K+G+   A  +  ++      P
Sbjct: 138 GLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKP 197

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           +V  ++++ID  C+   +++   L  EM  K +S +V T+T LI   C  ++L +A   L
Sbjct: 198 NVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLL 257

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++    + P  + YN ++D  CK G V EA  ++A M +   KPD +T++ L+ G+ + 
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLV 317

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             + +A  +FN M  +G  PD  +   LI+   K  M +EA  + +   +
Sbjct: 318 YELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQ 367



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 154/313 (49%), Gaps = 36/313 (11%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N +  TYN+++ +LC                                   + GK   A
Sbjct: 264 TINPNVYTYNILVDALC-----------------------------------KEGKVKEA 288

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K +L+      V      Y++L++         +A ++F     +   PD  ++ ILI G
Sbjct: 289 KNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILING 348

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             +   V +A   F +M      P IVTY++LI GLC+   ++   +L+ E++ +     
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG-IPA 407

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +V+TY S+I G CK G +D+A  ++N+M   GI+P + TF +L+DG  K G +  A+   
Sbjct: 408 NVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAF 467

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + +L+ GY  DV  ++ +I+G+C+ G L + L +  +M+     PN  TF I+INAL K+
Sbjct: 468 QDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKK 527

Query: 451 NRLNDARRFLKQL 463
           +  + A + L+Q+
Sbjct: 528 DENDKAEKLLRQM 540


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 200/411 (48%), Gaps = 8/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G        F      G  P        +    R  + D    LL + 
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+L+NAL+ Q  A EA  + +        P+  TF ++I+GL + GE+
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF    +M   G  PD+  +  L+  LC +  V       ++V     F+PD VTY +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIG-FTPDAVTYNT 181

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G  K G+++ A  +   +      P+  TF + +DG  K GN+  A    + M   G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VT+ +LIDG C+ G+L+  L L   ++ KN    ++ F+ L++ LC+ +RL +A 
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAI 298

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + LK +     VP    +N +++G C+A  VDEA  +   M+E  C  D +T+ IL+ G 
Sbjct: 299 QLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355

Query: 518 CMKGRMVEAISIFNKMLRI-GCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   R+ EA      M R  GC+P+ +T ++LI  L   G  N+A+ + +R
Sbjct: 356 CKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYER 406



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 215/436 (49%), Gaps = 23/436 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM-----RSDGHLP-NSPMIEFF-------------- 197
           TY  ++  LC+ G    ++  F+ M     RS    P +SP ++F               
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNT 478

Query: 198 -VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            V+   ++G    A GLL       ++     +NS+L+ L K+    +A  +FK      
Sbjct: 479 LVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 538

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            +P+  T++ LI GLS++ ++ +A +    M   GC  + VTY+T++ GL +V  +    
Sbjct: 539 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            +L++++  +   PD VTY ++I G+ K  ++ +A G+  EM   G  PS VT+  L  G
Sbjct: 599 VVLRQMR-DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 657

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSP 435
             + G    A  + + M + G  P+ +T+SS++DG C+ G++ + L   ++M + + ++P
Sbjct: 658 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 717

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +V  ++ LI+ LCK  R+++A  FL+++     +P    ++ +I+G C AG +D    + 
Sbjct: 718 HVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF 777

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             M E+ CK D   +  +I  +C+KG    A ++  +M   G A + +T   +I  L   
Sbjct: 778 CGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGN 837

Query: 556 GMPNEAFRIMQRASED 571
              +EA        ED
Sbjct: 838 DRIDEAVSYFHSIPED 853



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 223/504 (44%), Gaps = 92/504 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ + +  L + G        FD M   G  PN+   +  +    +AGK D A GLL   
Sbjct: 213 TFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL--- 269

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK-------------------------EY 252
           R        F ++SLL+ L + +  +EA+ + K                         E 
Sbjct: 270 RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEA 329

Query: 253 FRLYS-------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMG-SFGCSPDIVTYNTLIS 304
           F L+          D  T+NIL++GL ++  + +A+     M  + GCSP++VT++TLI 
Sbjct: 330 FELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQ 389

Query: 305 GLC---RVNEVARGHELLKEV------KFKSEF--------------------------- 328
           GLC   RVN+    +E +  V      +F   F                           
Sbjct: 390 GLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWR 449

Query: 329 --------------------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
                                P +VTY ++++G  K G +  A G+   M   G+ P  +
Sbjct: 450 SSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVI 509

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           TFN ++DG  K   ++ A  + +R L  G  P+VVT+S+LIDG  +  ++++ L+L  +M
Sbjct: 510 TFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 569

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                  N  T++ +++ L K  R+ DA   L+Q++    +P    YN +IDGF K   +
Sbjct: 570 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRL 629

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  ++ EM E    P  VT+T L  G C  GR  EA+ I + M   GCAP+ IT +S+
Sbjct: 630 REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSI 689

Query: 549 ISCLLKGGMPNEAFRIMQRASEDQ 572
           +  L K G   EA    ++ + D+
Sbjct: 690 VDGLCKAGRVTEALGYFEKMARDE 713



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 224/472 (47%), Gaps = 67/472 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA-----KG 212
           T+ L+++ LC+ G  ++   V D M   G +P+  +    + +    G+ D A     + 
Sbjct: 108 TFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL  F P  VT     YN++++ L K    + A  + +     +S P  +TF I + GLS
Sbjct: 168 LLIGFTPDAVT-----YNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLS 222

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE--------------------- 311
           + G +  A+EFF  M   G SP+ VTY+ LI GLC+  +                     
Sbjct: 223 KAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFS 282

Query: 312 -----VARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                + + H L + ++        P+VV + S+++G C+  ++D+A  +++ M   G  
Sbjct: 283 SLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCS 342

Query: 365 PSAVTFNVLIDGFGKVGNMVSA----EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
              +T+N+L+ G  K+  +  A    E MR    + G  P+VVTFS+LI G C  G++NQ
Sbjct: 343 ADVITYNILLKGLCKLRRIPEAYRHVELMRR---TEGCSPNVVTFSTLIQGLCNAGRVNQ 399

Query: 421 GLKLCDEMKG-KNLSPNVYTFTILINALCK---ENRLNDARRFLKQLKWN---------- 466
             ++ + M   + +SPN +T+  L+  LCK     RL      + + +W           
Sbjct: 400 AWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSP 459

Query: 467 --DLV------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             D +      P    YN ++ G  K+G V +A  ++  M E    PD +TF  ++ G C
Sbjct: 460 EVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLC 519

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            + R+++A ++F + L  GC P+ +T ++LI  L K    +EA +++ +  E
Sbjct: 520 KEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 571



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 204/454 (44%), Gaps = 33/454 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  L +M   D    +   M   G   N+      V   ++ G+ + A  +L Q 
Sbjct: 545 TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQM 604

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN+L++   K+    EAV + +E       P   T+  L  GL R G  
Sbjct: 605 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRF 664

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E    M + GC+P+ +TY++++ GLC+   V       +++      +P V+ Y++
Sbjct: 665 DEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSA 724

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G++D+A      M   G  P  VTF++LI+G    G + +   +   M   G
Sbjct: 725 LIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERG 784

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+  ++++I+ YC  G+ +    L +EMK   ++ N  T  I+I ALC  +R+++A 
Sbjct: 785 CKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAV 844

Query: 458 RFLK--------QLKWNDLV-------------------------PKPFMYNPVIDGFCK 484
            +          ++ +N L+                         P    Y  V+DG  K
Sbjct: 845 SYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFK 904

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           AG+ + A  ++ EM  +   PD  T+TI+I G     ++  A   F +MLR    PD I 
Sbjct: 905 AGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIV 964

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
            +SLI    K    ++A+++++ +  +  + + S
Sbjct: 965 YSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYS 998



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 183/413 (44%), Gaps = 38/413 (9%)

Query: 155  SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            S  TY  +   LC  G  D    + DYM + G  PN+      V    +AG+   A G  
Sbjct: 647  SVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYF 706

Query: 215  SQFRPGEVTM-STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +    EV       Y++L++ L K    DEA    +   R    PD  TF+ILI GL  
Sbjct: 707  EKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCD 766

Query: 274  IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             G +    E F  M   GC  DI  YN +I+  C   E +  + LL+E+K     + + V
Sbjct: 767  AGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG-IAKNTV 825

Query: 334  TYTSVISGYCKLGKMDKATGIYNE---------------------------------MNS 360
            T+  VI   C   ++D+A   ++                                  M +
Sbjct: 826  THGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVA 885

Query: 361  CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             G  P A  +  ++DG  K G+   A  + + M S G+ PD+ T++ +I G  +  QL  
Sbjct: 886  DGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPL 945

Query: 421  GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
                 +EM  KNL P+   ++ LI+A CK ++++DA + L+    + + P   MY+ ++D
Sbjct: 946  ACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVD 1002

Query: 481  GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
              CK    D+A  ++ EM+ K C+P    +T L   +  +GR+ EA+ + N +
Sbjct: 1003 SLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 151/281 (53%), Gaps = 7/281 (2%)

Query: 296 IVTYNTLISGLCRVNEVARGHELL-KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           +VTYN LI+GLC+   V        K ++F   F P VVTY++VI G C+  ++DK   +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFG--FRPTVVTYSTVIDGLCRDNEVDKGCKL 58

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
             EM   G  P+AVT+N L++     G    A  + ERM + G  P+++TF  +I G C+
Sbjct: 59  LEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCK 118

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G++    ++ DEM  +   P+V   T+L++ALC+  R+++A  F +Q+      P    
Sbjct: 119 EGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVT 178

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN ++DG  KAG ++ A +++  + E    P   TFTI + G    G +  A   F+ M 
Sbjct: 179 YNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMP 238

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           + G +P+ +T ++LI  L K G  + A  +++    D+N Q
Sbjct: 239 QTGVSPNTVTYDALIDGLCKAGKLDIALGLLR----DKNSQ 275



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 195/430 (45%), Gaps = 11/430 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC     D    + + M   G  PN+      V++ +  G+   A  LL + 
Sbjct: 38  TYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERM 97

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +  ++  L K+   + A  +  E       PD     +L+  L  +G V
Sbjct: 98  AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRV 157

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+ FF  +   G +PD VTYNT++ GL +   +     +L+ +  +S  SP V T+T 
Sbjct: 158 DEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLA-ESFSSPTVFTFTI 216

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-VSAEYMRERMLSF 396
            + G  K G +  A   ++ M   G+ P+ VT++ LIDG  K G + ++   +R++    
Sbjct: 217 AVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA 276

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G    +  FSSL+ G C+  +L + ++L   +K     PNV  F  L+N LC+  R+++A
Sbjct: 277 G----MFAFSSLLHGLCQAHRLEEAIQL---LKAMPCVPNVVCFNSLMNGLCQARRVDEA 329

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTILII 515
                 +K +        YN ++ G CK   + EA   V  M     C P+ VTF+ LI 
Sbjct: 330 FELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQ 389

Query: 516 GHCMKGRMVEAISIFNKMLRI-GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           G C  GR+ +A  ++ +M+ + G +P+  T   L+  L K G      +  ++  E +  
Sbjct: 390 GLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWR 449

Query: 575 QLPSWKKAVP 584
              SW    P
Sbjct: 450 SSSSWPIHSP 459



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 14/311 (4%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            T+++++  LC+ G  D+   +F  M   G   +       +++    G+  AA  LL + 
Sbjct: 756  TFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP----DTWTFNILIQGLSR 273
            +   +  +T  +  ++ AL   +  DEAV  F      +S P    D  ++N LI  L  
Sbjct: 816  KTHGIAKNTVTHGIVIKALCGNDRIDEAVSYF------HSIPEDCRDEISYNTLITSLVA 869

Query: 274  IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
                ++A E    M + G SPD   Y T++ GL +        +LL+E++ +   SPD+ 
Sbjct: 870  SRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGH-SPDLR 928

Query: 334  TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            TYT +ISG  K  ++  A   + EM    +KP A+ ++ LID F K   +  A  +   +
Sbjct: 929  TYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---L 985

Query: 394  LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
             S G  P +  +S+++D  C+N   ++ L++  EMK KN  P ++ +T L  A   E R+
Sbjct: 986  RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRV 1045

Query: 454  NDARRFLKQLK 464
            ++A + +  L+
Sbjct: 1046 DEAVKLVNDLQ 1056


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 202/404 (50%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L   G  D    +++ M     +PN+ +    + +  + G+ +    + ++ 
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N+ ++ + K    ++   +F+E   L   PD  ++ ILI GL + G  
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFA 600

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+E FY M   GC  D   YNT+I G C+  +V + ++LL+E+K K    P VVTY S
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH-EPTVVTYGS 659

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+ ++D+A  ++ E  S GI+ + V ++ LIDGFGKVG +  A  + E ++  G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ L+D   +  ++++ L     MK    +PN  T++ILI+ LCK  + N A 
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++     P  F Y  +I G  KAGN+ EA+ +  + +EK    D   +  +I G 
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               R  +A  +F +    GC+    T   L+  L K     +A
Sbjct: 840 SNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 215/454 (47%), Gaps = 46/454 (10%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN+++  LC+ G  ++  VV D M+  G  PN   +   V    +A + D A  + 
Sbjct: 408 NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIF 467

Query: 215 SQF-----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
                   RP  VT     Y SL+  L +    DEA  ++++       P+   +  LI+
Sbjct: 468 EGLDHKTCRPDAVT-----YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIR 522

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G  +   + + +M   GCSPD++  NT +  + +  E+ +G  L +E+K    F 
Sbjct: 523 NFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK-NLGFI 581

Query: 330 PDVVTYT-----------------------------------SVISGYCKLGKMDKATGI 354
           PD  +YT                                   +VI G+CK GK++KA  +
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
             EM + G +P+ VT+  +IDG  K+  +  A  + E   S G   +VV +SSLIDG+ +
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G++++   + +E+  K L+PNVYT+  L++AL K   +++A    + +K     P    
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +I G CK    ++A V   EM+++  KP+  T+T +I G    G +VEA ++F K  
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
             G   D    N++I  L      ++A+R+ + A
Sbjct: 822 EKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 223/503 (44%), Gaps = 39/503 (7%)

Query: 91  NEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSL--EVIKRLDNPKLGLKFLEFSRV 148
           N+   +  VC +L    + S    R     L+P   L   V++RL +    + +  ++  
Sbjct: 63  NKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAER 122

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
                H  + YN ++  +      + ++ + + M   G  P++      V S I++ K  
Sbjct: 123 LTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLR 182

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A   +   R  +   +   Y +L+ AL    ++D  + +F++   L    +   F  LI
Sbjct: 183 EAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLI 242

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +  +R G V  A     +M S    PD+V YN  I    +  +V    +   E+K  +  
Sbjct: 243 RVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMK-ANGL 301

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             D VTYTS+I   CK  ++++A  ++  M+     P A  +N +I G+G  G    A  
Sbjct: 302 VLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYS 361

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + ER    G +P VV+++ ++    R GQ+++ LK  +EMK K+  PN+ T+ I+I+ LC
Sbjct: 362 LLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLC 420

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  +L  A      +K   L P     N ++D  CKA  +D+A  I   ++ K C+PD V
Sbjct: 421 KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV 480

Query: 509 TFTILIIGHCMKGRMVEAI-----------------------------------SIFNKM 533
           T+  LI G    GR+ EA                                     I+N+M
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540

Query: 534 LRIGCAPDDITVNSLISCLLKGG 556
           LR+GC+PD + +N+ + C+ K G
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAG 563



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 156/333 (46%), Gaps = 2/333 (0%)

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           + +K     EA    +   +L  +P    +  LI  LS   +       F  M   G + 
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           ++  + TLI    R   V     LL E+K  S   PDVV Y   I  + K GK+D A   
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNS-LEPDVVLYNVCIDCFGKAGKVDMAWKF 292

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           ++EM + G+    VT+  +I    K   +  A  + E M     +P    ++++I GY  
Sbjct: 293 FHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGM 352

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G+      L +  + K   P+V ++  +++ L ++ ++++A +  +++K  D +P    
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLST 411

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +ID  CKAG ++ A V+   M++    P+ +T  I++   C   R+ +A SIF  + 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              C PD +T  SLI  L + G  +EA+++ ++
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 149/308 (48%), Gaps = 1/308 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL      ++Y +++  L + G       +F  M+  G + ++      +    ++GK +
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL + +      +   Y S+++ L K +  DEA  +F+E      + +   ++ LI
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  ++G + +A+    ++   G +P++ T+N L+  L +  E++      + +K   + 
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK-DLKC 755

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P+ +TY+ +I G CK+ K +KA   + EM   G KP+  T+  +I G  K GN+V A+ 
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E+    G + D   ++++I+G     + +   +L +E + K  S    T  +L+++L 
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875

Query: 449 KENRLNDA 456
           K   +  A
Sbjct: 876 KAECIEQA 883



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 1/282 (0%)

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            YN+L+  + R  +     ++L+E+     F P   T   ++  + K  K+ +A      
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAG-FGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M     +P+   +  LI       +      + ++M   GY  +V  F++LI  + R G+
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++  L L DEMK  +L P+V  + + I+   K  +++ A +F  ++K N LV     Y  
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I   CKA  ++EA  +   M++ +  P    +  +I+G+ M G+  +A S+  +  R G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           C P  ++ N ++SCL + G  +EA +  +   +D    L ++
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTY 412


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 202/404 (50%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L   G  D    +++ M     +PN+ +    + +  + G+ +    + ++ 
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N+ ++ + K    ++   +F+E   L   PD  ++ ILI GL + G  
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFA 600

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+E FY M   GC  D   YNT+I G C+  +V + ++LL+E+K K    P VVTY S
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH-EPTVVTYGS 659

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+ ++D+A  ++ E  S GI+ + V ++ LIDGFGKVG +  A  + E ++  G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ L+D   +  ++++ L     MK    +PN  T++ILI+ LCK  + N A 
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++     P  F Y  +I G  KAGN+ EA+ +  + +EK    D   +  +I G 
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               R  +A  +F +    GC+    T   L+  L K     +A
Sbjct: 840 SNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 215/454 (47%), Gaps = 46/454 (10%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN+++  LC+ G  ++  VV D M+  G  PN   +   V    +A + D A  + 
Sbjct: 408 NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIF 467

Query: 215 SQF-----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
                   RP  VT     Y SL+  L +    DEA  ++++       P+   +  LI+
Sbjct: 468 EGLDHKTCRPDAVT-----YCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIR 522

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G  +   + + +M   GCSPD++  NT +  + +  E+ +G  L +E+K    F 
Sbjct: 523 NFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK-NLGFI 581

Query: 330 PDVVTYT-----------------------------------SVISGYCKLGKMDKATGI 354
           PD  +YT                                   +VI G+CK GK++KA  +
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
             EM + G +P+ VT+  +IDG  K+  +  A  + E   S G   +VV +SSLIDG+ +
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G++++   + +E+  K L+PNVYT+  L++AL K   +++A    + +K     P    
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +I G CK    ++A V   EM+++  KP+  T+T +I G    G +VEA ++F K  
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
             G   D    N++I  L      ++A+R+ + A
Sbjct: 822 EKGGVADSAIYNAIIEGLSNANRASDAYRLFEEA 855



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 223/503 (44%), Gaps = 39/503 (7%)

Query: 91  NEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSL--EVIKRLDNPKLGLKFLEFSRV 148
           N+   +  VC +L    + S    R     L+P   L   V++RL +    + +  ++  
Sbjct: 63  NKRQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAER 122

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
                H  + YN ++  +      + ++ + + M   G  P++      V S I++ K  
Sbjct: 123 LTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLR 182

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A   +   R  +   +   Y +L+ AL    ++D  + +F++   L    +   F  LI
Sbjct: 183 EAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLI 242

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +  +R G V  A     +M S    PD+V YN  I    +  +V    +   E+K  +  
Sbjct: 243 RVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMK-ANGL 301

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             D VTYTS+I   CK  ++++A  ++  M+     P A  +N +I G+G  G    A  
Sbjct: 302 VLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYS 361

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + ER    G +P VV+++ ++    R GQ+++ LK  +EMK K+  PN+ T+ I+I+ LC
Sbjct: 362 LLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLC 420

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  +L  A      +K   L P     N ++D  CKA  +D+A  I   ++ K C+PD V
Sbjct: 421 KAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAV 480

Query: 509 TFTILIIGHCMKGRMVEAI-----------------------------------SIFNKM 533
           T+  LI G    GR+ EA                                     I+N+M
Sbjct: 481 TYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540

Query: 534 LRIGCAPDDITVNSLISCLLKGG 556
           LR+GC+PD + +N+ + C+ K G
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAG 563



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 156/333 (46%), Gaps = 2/333 (0%)

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           + +K     EA    +   +L  +P    +  LI  LS   +       F  M   G + 
Sbjct: 174 SFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAV 233

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           ++  + TLI    R   V     LL E+K  S   PDVV Y   I  + K GK+D A   
Sbjct: 234 NVHLFTTLIRVFAREGRVDAALSLLDEMKSNS-LEPDVVLYNVCIDCFGKAGKVDMAWKX 292

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           ++EM + G+    VT+  +I    K   +  A  + E M     +P    ++++I GY  
Sbjct: 293 FHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGM 352

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G+      L +  + K   P+V ++  +++ L ++ ++++A +  +++K  D +P    
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLST 411

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +ID  CKAG ++ A V+   M++    P+ +T  I++   C   R+ +A SIF  + 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              C PD +T  SLI  L + G  +EA+++ ++
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 149/308 (48%), Gaps = 1/308 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL      ++Y +++  L + G       +F  M+  G + ++      +    ++GK +
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL + +      +   Y S+++ L K +  DEA  +F+E      + +   ++ LI
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  ++G + +A+    ++   G +P++ T+N L+  L +  E++      + +K   + 
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK-DLKC 755

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P+ +TY+ +I G CK+ K +KA   + EM   G KP+  T+  +I G  K GN+V A+ 
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E+    G + D   ++++I+G     + +   +L +E + K  S    T  +L+++L 
Sbjct: 816 LFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLH 875

Query: 449 KENRLNDA 456
           K   +  A
Sbjct: 876 KAECIEQA 883



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 1/282 (0%)

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            YN+L+  + R  +     ++L+E+     F P   T   ++  + K  K+ +A      
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAG-FGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M     +P+   +  LI       +      + ++M   GY  +V  F++LI  + R G+
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++  L L DEMK  +L P+V  + + I+   K  +++ A +   ++K N LV     Y  
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I   CKA  ++EA  +   M++ +  P    +  +I+G+ M G+  +A S+  +  R G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           C P  ++ N ++SCL + G  +EA +  +   +D    L ++
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTY 412


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 215/410 (52%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +++ LC  G      +  D + + G   +       +    + G+  AA  LL + 
Sbjct: 157 TFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  MYN++++++ K    +EA  +F E       PD  T++ LI G   +G++
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKL 276

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M      PD+ T+N L++  C+  ++  G  +  ++  K    P+ VTY S
Sbjct: 277 NDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF-DMMMKQGIKPNFVTYNS 335

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC + +++KA  I+N M   G+ P   +++++I+GF K+     A  + + M    
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PDVVT+SSLIDG  ++G+++  L+L D+M  + + P + T+  +++ALCK ++++ A 
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAI 455

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L +LK   + P  + Y+ +I G C++G +++A  +   +  K    +  T+TI+I G 
Sbjct: 456 ALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C++G   EA+++ +KM   GC PD  T   +I  L K    + A ++++ 
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 202/391 (51%), Gaps = 7/391 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM-RSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +Y  ++  LC++G     +   D + R DG+L  PN  M    + S  +    + A  L 
Sbjct: 192 SYGTLIHGLCKVG---ETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     ++     Y++L++        ++A+ +F +      +PD +TFNIL+    + 
Sbjct: 249 SEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++K+    F  M   G  P+ VTYN+L+ G C V EV +   +   +  +   +PD+ +
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA-QGGVNPDIQS 367

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I+G+CK+ K D+A  ++ EM+   I P  VT++ LIDG  K G +  A  + ++M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P + T++S++D  C+  Q+++ + L  ++K K + PN+YT++ILI  LC+  +L 
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLE 487

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DAR+  + L           Y  +I GFC  G  +EA  ++++ME+  C PD  T+ I+I
Sbjct: 488 DARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           +    K     A  +  +M+  G  P  I +
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGVRPRQIAI 578



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 213/412 (51%), Gaps = 1/412 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N+++   C++GL      VF  +   G++P++      +      G+   A     +   
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
                    Y +L++ L K      A+ + +       QP+   +N +I  + ++  V +
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           AF+ F +M S G SPD+VTY+ LISG C + ++    +L  ++  ++   PDV T+  ++
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN-IKPDVYTFNILV 302

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           + +CK GKM +   +++ M   GIKP+ VT+N L+DG+  V  +  A+ +   M   G  
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD+ ++S +I+G+C+  + ++ + L  EM  KN+ P+V T++ LI+ L K  R++ A + 
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           + Q+    + P    YN ++D  CK   VD+A  ++ ++++K  +P+  T++ILI G C 
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G++ +A  +F  +L  G   +  T   +I      G+ NEA  ++ +  ++
Sbjct: 483 SGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDN 534



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 189/363 (52%), Gaps = 1/363 (0%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  L ++      T   F +N +L +LVK  +    +Y+ ++      +P+    NIL
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I    ++G +  AF  F  +   G  PD +T+ TLI GLC   ++ +   L  +      
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAF-LFHDKVVALG 185

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F  D ++Y ++I G CK+G+   A  +   ++   ++P+ V +N +ID   KV  +  A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M+S G  PDVVT+S+LI G+C  G+LN  + L ++M  +N+ P+VYTF IL+NA 
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK+ ++ + +     +    + P    YN ++DG+C    V++A  I   M +    PD 
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +++I+I G C   +  EA+++F +M R    PD +T +SLI  L K G  + A +++ +
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 568 ASE 570
             +
Sbjct: 426 MHD 428



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 206/408 (50%), Gaps = 1/408 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++ SL +   + +V  +   M   G  PN       ++   + G    A  + ++  
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                  T  + +L+  L  +    +A     +   L    D  ++  LI GL ++GE +
Sbjct: 148 KMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A +    +      P++V YNT+I  +C+V  V    +L  E+  K   SPDVVTY+++
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG-ISPDVVTYSAL 266

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ISG+C LGK++ A  ++N+M    IKP   TFN+L++ F K G M   + + + M+  G 
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+ VT++SL+DGYC   ++N+   + + M    ++P++ +++I+IN  CK  + ++A  
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K++   +++P    Y+ +IDG  K+G +  A  +V +M ++   P   T+  ++   C
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALC 446

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              ++ +AI++  K+   G  P+  T + LI  L + G   +A ++ +
Sbjct: 447 KIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE 494



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 35/266 (13%)

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           + ++Y+S  + +     +D A  ++N +      P A  FN ++    K  +  +  Y+ 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           ++M   G  P++V  + LI+ +C+ G +     +  ++      P+  TFT LI  LC +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 451 NRLNDARRF-----------------------------------LKQLKWNDLVPKPFMY 475
            ++  A  F                                   L+++  N + P   MY
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +ID  CK   V+EA  + +EM  K   PD VT++ LI G C+ G++ +AI +FNKM+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEA 561
               PD  T N L++   K G   E 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEG 314



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 1/218 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N   ++Y++++   C++   D    +F  M     +P+       +    ++G+   A 
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L+ Q     V  +   YNS+L+AL K +  D+A+ +  +      QP+ +T++ILI+GL
Sbjct: 421 QLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGL 480

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G+++ A + F  +   G + ++ TY  +I G C          LL +++  +   PD
Sbjct: 481 CQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKME-DNGCIPD 539

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             TY  +I    K  + D A  +  EM + G++P  + 
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 94/189 (49%), Gaps = 8/189 (4%)

Query: 396 FGYLP------DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           F ++P      + +++SS    +  N  ++  + L + +  +N +P  + F  ++ +L K
Sbjct: 38  FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               +      +++++  + P     N +I+ FC+ G +  A  + A++ +    PD +T
Sbjct: 98  SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           FT LI G C+KG++ +A    +K++ +G   D I+  +LI  L K G    A  ++QR  
Sbjct: 158 FTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV- 216

Query: 570 EDQNLQLPS 578
            D NL  P+
Sbjct: 217 -DGNLVQPN 224


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 211/396 (53%), Gaps = 8/396 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           ++ ++++  CE G    ++  FD +      G  PN  +    +  C + G+ + AK L 
Sbjct: 165 SFGILIKGCCEAG---EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  +   Y  L+N L K     +   M+++       P+ +T+N ++  L + 
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  K AF+ F +M   G S +IVTYNTLI GLCR  ++   ++++ ++K     +P+++T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK-SDGINPNLIT 340

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+C +GK+ KA  +  ++ S G+ PS VT+N+L+ GF + G+   A  M + M 
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P  VT++ LID + R+  + + ++L   M+   L P+V+T+++LI+  C + ++N
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A R  K +   +  P   +YN +I G+CK G+   A  ++ EMEEK   P+  ++  +I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              C + +  EA  +  KM+  G  P   ++ SLIS
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDP-STSILSLIS 555



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 217/417 (52%), Gaps = 2/417 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F+ Y +++ S  +    +     F+ M  +G +P S    + ++  + +   +      +
Sbjct: 94  FRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN 153

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +    +V +  + +  L+    +    +++  +  E       P+   +  LI G  + G
Sbjct: 154 E-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E++KA + F++MG  G   +  TY  LI+GL +     +G E+ ++++    F P++ TY
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF-PNLYTY 271

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             V++  CK G+   A  +++EM   G+  + VT+N LI G  +   +  A  + ++M S
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+++T+++LIDG+C  G+L + L LC ++K + LSP++ T+ IL++  C++   + 
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A + +K+++   + P    Y  +ID F ++ N+++A  +   MEE    PD  T+++LI 
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           G C+KG+M EA  +F  M+   C P+++  N++I    K G    A ++++   E +
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 198/371 (53%), Gaps = 1/371 (0%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +  C  AG+ + +  LL +      + +  +Y +L++   K+   ++A  +F E  +L 
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
              +  T+ +LI GL + G  K+ FE +  M   G  P++ TYN +++ LC+        
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           ++  E++ +   S ++VTY ++I G C+  K+++A  + ++M S GI P+ +T+N LIDG
Sbjct: 289 QVFDEMRERG-VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F  VG +  A  +   + S G  P +VT++ L+ G+CR G  +   K+  EM+ + + P+
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T+TILI+   + + +  A +    ++   LVP    Y+ +I GFC  G ++EA+ +  
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M EK C+P++V +  +I+G+C +G    A+ +  +M     AP+  +   +I  L K  
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527

Query: 557 MPNEAFRIMQR 567
              EA R++++
Sbjct: 528 KSKEAERLVEK 538



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 166/322 (51%), Gaps = 3/322 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  ++ L  N   +TY +++  L + G+      +++ M+ DG  PN       ++  
Sbjct: 221 FFEMGKLGLVANE--RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + G+   A  +  + R   V+ +   YN+L+  L ++   +EA  +  +       P+ 
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+N LI G   +G++ KA     D+ S G SP +VTYN L+SG CR  + +   +++KE
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ +    P  VTYT +I  + +   M+KA  +   M   G+ P   T++VLI GF   G
Sbjct: 399 MEERG-IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            M  A  + + M+     P+ V ++++I GYC+ G   + LKL  EM+ K L+PNV ++ 
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517

Query: 442 ILINALCKENRLNDARRFLKQL 463
            +I  LCKE +  +A R ++++
Sbjct: 518 YMIEVLCKERKSKEAERLVEKM 539


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 200/366 (54%), Gaps = 6/366 (1%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           LP        V    +AG+   A  LL + R    + + + YN ++  L ++   DEA  
Sbjct: 77  LPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKK 136

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           M +E       PD  T+N  I+GL +   V +A +F   M     +PD+V+Y T+I+GLC
Sbjct: 137 MLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLC 193

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  ++     +L ++  +   +PDVVTY+S+I G+CK G++++A G+ + M   G +P+ 
Sbjct: 194 KSGDLDSASRMLDQMTNRG-CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 252

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V +N L+    ++G++  AE M   M   G+ PDVV++++ IDG C+  ++ +   + D 
Sbjct: 253 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 312

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  +  +PN  ++++L+  LCK+  L+DA   ++Q +    +    +Y  ++DG CK G 
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGR 372

Query: 488 VDEANVIVAE-MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            DEA  + ++ ++EK C+PD   + +++  HC + ++ +A+ I  +ML   C  + +T N
Sbjct: 373 FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWN 431

Query: 547 SLISCL 552
            L+  L
Sbjct: 432 ILVHGL 437



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 214/424 (50%), Gaps = 7/424 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++R LC     +  + +   M+  G +P+  +    +S   +A     A   L++ 
Sbjct: 12  TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y ++++ L K     +AV +  E       P+ +T+N++++GL    ++
Sbjct: 72  VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 131

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M   G  PD+VTYN+ I GLC+ + V    + L     +   +PDVV+YT+
Sbjct: 132 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA----RMPVTPDVVSYTT 187

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G CK G +D A+ + ++M + G  P  VT++ LIDGF K G +  A  + + ML  G
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 247

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++V ++SL+    R G + +   +  EM+ +  +P+V ++   I+ LCK  R+  A+
Sbjct: 248 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++      P    Y+ +++  CK   +D+A  +V +  EK    D + +T+L+ G 
Sbjct: 308 AVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGL 367

Query: 518 CMKGRMVEAISIFNKML--RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           C  GR  EA ++F+K+L  +I C PD    N ++    K    ++A +I ++  E     
Sbjct: 368 CKGGRFDEACALFSKVLDEKI-CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCN 426

Query: 576 LPSW 579
           + +W
Sbjct: 427 VVTW 430



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 192/384 (50%), Gaps = 4/384 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++      +    R+ + + A+ LL + +         +YN+L++   K  +  +A   
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
             E  + +  P   T+  ++ GL + G  K A +   +M   GCSP+I TYN ++ GLC 
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             ++    ++L+E+  +  F PDVVTY S I G CK  ++D+A      M    + P  V
Sbjct: 128 ERKLDEAKKMLEEMAVRGYF-PDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVV 183

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           ++  +I+G  K G++ SA  M ++M + G  PDVVT+SSLIDG+C+ G++ + + L D M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                 PN+  +  L+ AL +   +  A   L +++     P    YN  IDG CKA  V
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 303

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            +A  +   M E+ C P+  ++++L+   C K  + +AI++  +        D +    L
Sbjct: 304 KKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVL 363

Query: 549 ISCLLKGGMPNEAFRIMQRASEDQ 572
           +  L KGG  +EA  +  +  +++
Sbjct: 364 LDGLCKGGRFDEACALFSKVLDEK 387



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 210/411 (51%), Gaps = 6/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LCE    D  + + + M   G+ P+      F+    +  + D A+  L++ 
Sbjct: 117 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 176

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT     Y +++N L K  + D A  M  +       PD  T++ LI G  + GEV
Sbjct: 177 ---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEV 233

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   GC P++V YN+L+  L R+  + +  ++L E++ +  F+PDVV+Y +
Sbjct: 234 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG-FTPDVVSYNA 292

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I G CK  ++ KA  +++ M   G  P+A ++++L++   K   +  A  + E+     
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDE-MKGKNLSPNVYTFTILINALCKENRLNDA 456
            + D++ ++ L+DG C+ G+ ++   L  + +  K   P+V+ + +++++ CK  +++ A
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  KQ+   +       +N ++ G C    + +A  ++  M ++   PD VT+  L+  
Sbjct: 413 LQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 471

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C  G+   A+ +F + ++ GC PD +T ++LI+ L+   M  EA+ +  +
Sbjct: 472 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 522



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 176/348 (50%), Gaps = 39/348 (11%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           QPD +TF IL++GL R  +++KA +    M   GC PD   YN LISG  +  +  +  +
Sbjct: 7   QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
            L E+  K+   P VVTYT+++ G CK G+   A  + +EM   G  P+  T+NV+++G 
Sbjct: 67  FLAEM-VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            +   +  A+ M E M   GY PDVVT++S I G C+  ++++  K    M    ++P+V
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDV 182

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD-------- 489
            ++T +IN LCK   L+ A R L Q+      P    Y+ +IDGFCK G V+        
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 490 ---------------------------EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
                                      +A  ++ EME +   PD V++   I G C   R
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + +A ++F++M+  GC P+  + + L+  L K    ++A  ++++A E
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQARE 350



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 149/270 (55%), Gaps = 4/270 (1%)

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C PD  T+  L+ GLCR N++ +  +LL  +K +    PD   Y ++ISGY K     +A
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMK-EMGCVPDDAIYNALISGYSKAKDFGQA 64

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
                EM      P+ VT+  ++DG  K G    A  + + M   G  P++ T++ +++G
Sbjct: 65  FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C   +L++  K+ +EM  +   P+V T+   I  LCK +R+++AR+FL ++    + P 
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPD 181

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              Y  VI+G CK+G++D A+ ++ +M  + C PD VT++ LI G C  G +  A+ + +
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            ML++GC P+ +  NSL+  L + G   +A
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKA 271



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 195/446 (43%), Gaps = 50/446 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V+  LC+ G  DS   + D M + G  P+       +    + G+ + A GLL   
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YNSLL AL +  +  +A  M  E  R    PD  ++N  I GL +   V
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 303

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF--------- 328
           KKA   F  M   GC+P+  +Y+ L+  LC+  E+     L+++ + K +          
Sbjct: 304 KKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVL 363

Query: 329 --------------------------SPDVVTYTSVISGYCKLGKMDKATGIYNEM---N 359
                                      PDV  Y  ++  +CK  ++DKA  I+ +M   N
Sbjct: 364 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN 423

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
            C +    VT+N+L+ G      +  AE M   M+  G++PD VT+ +L+D  C+ G+  
Sbjct: 424 CCNV----VTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSA 479

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             L+L +E       P+V T++ LI  L  EN   +A     +L          ++N +I
Sbjct: 480 AALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVA-------LWNAMI 532

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV-EAISIFNKMLRIGC 538
            G+ + G+ D    +  E+ E   +P+  TF   I G  +K   + +A  +F++ ++ G 
Sbjct: 533 LGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGF 592

Query: 539 APDDITVNSLISCLLKGGMPNEAFRI 564
            PD    N+LI    K G   EA RI
Sbjct: 593 FPDLFVANTLIDVFAKCGDLEEARRI 618



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 156/345 (45%), Gaps = 11/345 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN  +  LC+       + VFD M   G  PN+      V    +  + D A  L+ Q 
Sbjct: 289 SYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQA 348

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGE 276
           R     +   +Y  LL+ L K    DEA  +F +       +PD + +N+++    +  +
Sbjct: 349 REKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 408

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + KA +    M    C  ++VT+N L+ GLC  + ++    +L  +     F PD VTY 
Sbjct: 409 IDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTM-VDEGFIPDFVTYG 466

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++   CK GK   A  ++ E    G  P  VT++ LI G      +V      E  L F
Sbjct: 467 TLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG------LVHENMAEEAYLLF 520

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA-LCKENRLND 455
             L DV  ++++I GY  NG  + GLKL  E+   ++ PN  TF   I+  L K   L  
Sbjct: 521 TKL-DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGK 579

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           AR    +       P  F+ N +ID F K G+++EA  I   M++
Sbjct: 580 ARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 81/142 (57%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  K+  P+ +TF IL+  LC+ N+L  AR+ L ++K    VP   +YN +I G+ KA +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             +A   +AEM +  C P  VT+T ++ G C  GR  +A+ + ++M   GC+P+  T N 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 548 LISCLLKGGMPNEAFRIMQRAS 569
           ++  L +    +EA ++++  +
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMA 142


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 169/292 (57%), Gaps = 1/292 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P+ +T+N +I  L + G+V +A     +M S G +PD V Y TLI G C++  V+  + 
Sbjct: 220 KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYR 279

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E++ K + SPD +TYT+VI G C+ G++ +A  +++EM    ++P  VT+  LIDG+
Sbjct: 280 LFDEMQ-KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G M  A  +  +ML  G  P++VT+++L DG C+ G+++   +L  EM  K L  N+
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           YT+  L+N LCK   ++ A + +K ++     P    Y  ++D +CK+  +  A+ ++ +
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 458

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           M ++  +P  VTF +L+ G CM G + +   +   ML  G  P+  T NSLI
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI 510



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 171/336 (50%), Gaps = 1/336 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           + YN ++  L K     EA  + +E       PD   +  LI G  ++G V  A+  F +
Sbjct: 224 YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 283

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M     SPD +TY  +I GLC+   V    +L  E+  K    PD VTYT++I GYCK G
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK-RLEPDEVTYTALIDGYCKEG 342

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           KM +A  ++N+M   G+ P+ VT+  L DG  K G + +A  +   M   G   ++ T++
Sbjct: 343 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 402

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           SL++G C+ G ++Q +KL  +M+     P+  T+T L++A CK   +  A   L+Q+   
Sbjct: 403 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 462

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           +L P    +N +++GFC +G +++   ++  M EK   P+  T+  LI  +C++  M   
Sbjct: 463 ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT 522

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             I+  M   G  PD  T N LI    K     EA+
Sbjct: 523 TEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 184/384 (47%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+  LC+ G     + V   M S+G  P+  +    +    + G   +A  L  + 
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +  +++     Y +++  L +     EA  +F E      +PD  T+  LI G  + G++
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+AF     M   G +P+IVTY  L  GLC+  EV   +ELL E+  K     ++ TY S
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG-LELNIYTYNS 403

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK G +D+A  +  +M   G  P AVT+  L+D + K   MV A  +  +ML   
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVTF+ L++G+C +G L  G KL   M  K + PN  T+  LI   C  N +    
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +    +VP    YN +I G CKA N+ EA  +  +M  K       ++  LI G 
Sbjct: 524 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 583

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
             + + +EA  +F +M R G   D
Sbjct: 584 YKRKKFLEARELFEQMRREGLVAD 607



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 189/385 (49%), Gaps = 5/385 (1%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + + M+  G  PN       +    + GK   A+ +L +     +     +Y +L++   
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  N   A  +F E  +    PD  T+  +I GL + G V +A + F++M      PD V
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY  LI G C+  ++     L  ++  +   +P++VTYT++  G CK G++D A  + +E
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQM-LQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G++ +  T+N L++G  K GN+  A  + + M   G+ PD VT+++L+D YC++ +
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  +L  +M  + L P V TF +L+N  C    L D  + LK +    ++P    YN 
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I  +C   N+     I   M  K   PD  T+ ILI GHC    M EA  +   M+  G
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568

Query: 538 CAPDDITVNSLISCLLKGGMPNEAF 562
               ++TV+S  + L+KG    + F
Sbjct: 569 F---NLTVSSY-NALIKGFYKRKKF 589



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 154/281 (54%), Gaps = 1/281 (0%)

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +M   G  P+  TYN +I  LC+  +VA    +L+E+      +PD V YT++I G+CKL
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM-ISEGIAPDGVIYTTLIDGFCKL 271

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G +  A  +++EM    I P  +T+  +I G  + G ++ A+ +   M+     PD VT+
Sbjct: 272 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 331

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           ++LIDGYC+ G++ +   L ++M    L+PN+ T+T L + LCK   ++ A   L ++  
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L    + YN +++G CKAGN+D+A  ++ +ME     PD VT+T L+  +C    MV 
Sbjct: 392 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           A  +  +ML     P  +T N L++     GM  +  ++++
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 492



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 150/325 (46%), Gaps = 1/325 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F TY  V+  LC+ G       +F  M      P+       +    + GK   A  L +
Sbjct: 293 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 352

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           Q     +T +   Y +L + L K    D A  +  E  R   + + +T+N L+ GL + G
Sbjct: 353 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 412

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + +A +   DM   G  PD VTY TL+   C+  E+ R HELL+++    E  P VVT+
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM-LDRELQPTVVTF 471

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +++G+C  G ++    +   M   GI P+A T+N LI  +    NM +   +   M +
Sbjct: 472 NVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCA 531

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G +PD  T++ LI G+C+   + +   L  +M GK  +  V ++  LI    K  +  +
Sbjct: 532 KGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 591

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVID 480
           AR   +Q++   LV    +YN   D
Sbjct: 592 ARELFEQMRREGLVADREIYNIFAD 616



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 118/213 (55%)

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +  EM   G+KP+  T+N +I    K G +  AE +   M+S G  PD V +++LIDG+C
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G ++   +L DEM+ + +SP+  T+T +I  LC+  R+ +A +   ++    L P   
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            Y  +IDG+CK G + EA  +  +M +    P+ VT+T L  G C  G +  A  + ++M
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            R G   +  T NSL++ L K G  ++A ++M+
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 422



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 386 AEYMRERMLSFGYLPDVVT-------FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           A  + ++ML++G L  V +        S  +DG     +    LKL +EM+ K L PN Y
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  +I  LCK  ++ +A R L+++    + P   +Y  +IDGFCK GNV  A  +  EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           ++++  PD +T+T +I G C  GR++EA  +F++M+     PD++T  +LI    K G  
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 559 NEAFRIMQRASEDQNLQL 576
            EAF +      +Q LQ+
Sbjct: 345 KEAFSL-----HNQMLQM 357


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 204/405 (50%), Gaps = 12/405 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  L + G H     +F  M+     P+       ++    +G+   A+ LL +  
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML 315

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++      +++L+NA VK+    EA  ++ E       P T T++ +I G  +   + 
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLD 375

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   FY   + GCSPDI+T+NTLI+G CR   V  G +LL E+  ++    + +TYT++
Sbjct: 376 AAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT-EAGLVANTITYTTL 434

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF-- 396
           I G+C++G ++ A  +  EM S G+ P+ VT N L+DG    G +  A  M + M     
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 397 ---------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                    G  PDV T++ LI G    G+  +  +L +EM  + + P+  T++ +I+ L
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK++RL++A +    +      P    +N +I G+CKAG VD+   +  EM ++    D 
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +T+  LI G      +  A+ IF +M+  G  PD IT+ ++++ L
Sbjct: 615 ITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGL 659



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 187/364 (51%), Gaps = 12/364 (3%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P  VT     +N+LL+ L  ++   EA+ +F +      +P+  TF  L+ GL R G 
Sbjct: 147 FHPTVVT-----FNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGR 197

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A      M   G  P+ +TY T++ G+C++ +      LL++++  S   P+VV Y 
Sbjct: 198 VVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYN 257

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G  K G+   A  ++ EM    I P  VT+N +I+GF   G    AE + + ML  
Sbjct: 258 TIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLER 317

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PDVVTFS+LI+ + + G+  +  +L DEM  +++ P+  T++ +I+  CK+NRL+ A
Sbjct: 318 KINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAA 377

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                        P    +N +I G+C+A  VD+   ++ EM E     + +T+T LI G
Sbjct: 378 EHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 437

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
            C  G +  A  +  +M+  G  P+ +T N+L+  L   G   +A   F+ MQ++  D +
Sbjct: 438 FCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 497

Query: 574 LQLP 577
              P
Sbjct: 498 ASRP 501



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 222/476 (46%), Gaps = 53/476 (11%)

Query: 137 KLGLKFLEFSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL      F ++  L  + +  T+N ++  LC   + D +    D        PN     
Sbjct: 131 KLPFALSTFGKITKLGFHPTVVTFNTLLHGLC---VEDRISEALDLFHQMCK-PNVVTFT 186

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             ++   R G+   A  LL +     +  +   Y ++++ + K  +   A+ + ++   +
Sbjct: 187 TLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 246

Query: 256 -YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
            +  P+   +N +I GL + G    A   F +M      PDIVTYN +I+G C     + 
Sbjct: 247 SHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSD 306

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             +LL+E+  + + +PDVVT++++I+ + K GK  +A  +Y+EM    I PS VT++ +I
Sbjct: 307 AEQLLQEM-LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMI 365

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           DGF K   + +AE+M     + G  PD++TF++LI GYCR  +++ G+KL  EM    L 
Sbjct: 366 DGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLV 425

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA--- 491
            N  T+T LI+  C+   LN A+  L+++  + + P     N ++DG C  G + +A   
Sbjct: 426 ANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEM 485

Query: 492 ---------------------------NVIVA----------------EMEEKRCKPDKV 508
                                      N+++                 EM  +   PD +
Sbjct: 486 FKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T++ +I G C + R+ EA  +F+ M     +PD +T N+LI+   K GM ++   +
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL 601



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 180/387 (46%), Gaps = 12/387 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G     + +   M      P+       +++ ++ GK   A+ L  + 
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM 349

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P  +  ST  Y+S+++   KQN  D A +MF         PD  TFN LI G  R   V
Sbjct: 350 LPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRV 409

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               +  ++M   G   + +TY TLI G C+V ++    +LL+E+   S   P+VVT  +
Sbjct: 410 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM-ISSGVCPNVVTCNT 468

Query: 338 VISGYCKLGKMDKATGIYNEMNSC-----------GIKPSAVTFNVLIDGFGKVGNMVSA 386
           ++ G C  GK+  A  ++  M              G++P   T+N+LI G    G  + A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA 528

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           E + E M   G +PD +T+SS+IDG C+  +L++  ++ D M  K+ SP+V TF  LI  
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITG 588

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK   ++D      ++    +V     Y  +I GF K  N+D A  I  EM      PD
Sbjct: 589 YCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPD 648

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKM 533
            +T   ++ G   K  +  A+++   +
Sbjct: 649 TITIRNMLTGLWSKEELERAVAMLEDL 675



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 182/379 (48%), Gaps = 41/379 (10%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   +  L+  +V+    D  + + K+   L    + ++F IL++      ++  A   F
Sbjct: 80  SVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTF 139

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G  P +VT+NTL+ GLC  + ++   +L     F     P+VVT+T++++G C+
Sbjct: 140 GKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL-----FHQMCKPNVVTFTTLMNGLCR 194

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL----- 399
            G++ +A  + + M   G++P+ +T+  ++DG  K+G+ VSA  +  +M    ++     
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 400 -------------------------------PDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
                                          PD+VT++ +I+G+C +G+ +   +L  EM
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             + ++P+V TF+ LINA  KE +  +A     ++    ++P    Y+ +IDGFCK   +
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           D A  +      K C PD +TF  LI G+C   R+ + I + ++M   G   + IT  +L
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434

Query: 549 ISCLLKGGMPNEAFRIMQR 567
           I    + G  N A  ++Q 
Sbjct: 435 IHGFCQVGDLNAAQDLLQE 453



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 40/268 (14%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V+ +  ++    ++G+ D    ++ +M    +  +A +F +L+  F     +  A   
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++   G+ P VVTF++L+ G C   ++++ L L  +M      PNV TFT L+N LC+
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA---------------NVI 494
           E R+ +A   L ++  + L P    Y  ++DG CK G+   A               NV+
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 495 V---------------------AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           +                      EM+EK   PD VT+  +I G C+ GR  +A  +  +M
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEA 561
           L     PD +T ++LI+  +K G   EA
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEA 342



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 10/181 (5%)

Query: 396 FGY------LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           FGY      LP V+ F  L+    R G+ +  + L  +M+   +  N Y+FTIL+   C 
Sbjct: 69  FGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCS 128

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            ++L  A     ++      P    +N ++ G C    + EA  +  +M    CKP+ VT
Sbjct: 129 CSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVT 184

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           FT L+ G C +GR+VEA+++ ++ML  G  P+ IT  +++  + K G    A  ++++  
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 244

Query: 570 E 570
           E
Sbjct: 245 E 245



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 5/234 (2%)

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           SG+ ++  +D A  ++  M      PS + F  L+    ++G       + ++M      
Sbjct: 54  SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            +  +F+ L+  +C   +L   L    ++      P V TF  L++ LC E+R+++A   
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             Q+      P    +  +++G C+ G V EA  ++  M E   +P+++T+  ++ G C 
Sbjct: 174 FHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229

Query: 520 KGRMVEAISIFNKMLRIG-CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            G  V A+++  KM  +    P+ +  N++I  L K G  ++A  +     E +
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKE 283



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 105/265 (39%), Gaps = 13/265 (4%)

Query: 60  ASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCE 119
           A+TI      HG    G     +  +    S+      V C  LL            LC+
Sbjct: 426 ANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDG----------LCD 475

Query: 120 KLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF 179
                ++LE+ K +   K+ +   + SR    +    +TYN+++  L   G     + ++
Sbjct: 476 NGKLKDALEMFKAMQKSKMDI---DASRPFNGVEPDVQTYNILICGLINEGKFLEAEELY 532

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           + M   G +P++      +    +  + D A  +         +     +N+L+    K 
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
              D+ + +F E  +     D  T+  LI G  ++  +  A + F +M S G  PD +T 
Sbjct: 593 GMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITI 652

Query: 300 NTLISGLCRVNEVARGHELLKEVKF 324
             +++GL    E+ R   +L++++ 
Sbjct: 653 RNMLTGLWSKEELERAVAMLEDLQM 677


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 206/413 (49%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M +    G  D    + + M+    +P        V    +AG+ D A  LL + 
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   Y+SL+ +  K++  +E++ +F E  R     D  T++++I  L +  +V
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M   G  P +  Y TL+S L +  ++    ++  E++ +S   PD   Y  
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQ-ESSLVPDTFVYNI 708

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G  K  ++D+A  + + M +  I P   T+  L+DG GK G +  A  M  +M   G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + PDVV ++SL+D   + G+L+  L +   M  K   P+V T++ LI++L KE R+ +A 
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F +        P   +Y+ +ID F K G VD A  +  EM+ ++C P+ VT+  L+ G 
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              GR+  A  +  +M ++GC PD +T N LI  + K GM +EA    +R  E
Sbjct: 889 AKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKE 941



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 202/413 (48%), Gaps = 1/413 (0%)

Query: 155  SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            S  TY+ +M S  +    +    +FD M   G + +       ++   ++   D A  + 
Sbjct: 597  SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVF 656

Query: 215  SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
             + +   +      Y +LL++LVK    D A+ +F E       PDT+ +NI++ GL + 
Sbjct: 657  GRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKS 716

Query: 275  GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
              V +A +    M +    PD+ TY +L+ GL +   +     +  ++  +    PDVV 
Sbjct: 717  NRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT-EEGHEPDVVA 775

Query: 335  YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            YTS++    K GK+  A  I+  M      P  VT++ LID  GK G +  A Y  E  +
Sbjct: 776  YTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSI 835

Query: 395  SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            S G  P+V  +SSLID + + G +++ L+L +EM+ +   PN+ T+  L++ L K  RLN
Sbjct: 836  SKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLN 895

Query: 455  DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
             A + L++++    VP    YN +IDG  K G VDEA      M+EK   PD +TFT LI
Sbjct: 896  VAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLI 955

Query: 515  IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
                   +++EA  +F+ M   G  P  +T N LI  L + G  +EA  I   
Sbjct: 956  ESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHE 1008



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 235/518 (45%), Gaps = 67/518 (12%)

Query: 120 KLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF 179
           KL+P    +V+    +  L   F  ++      +H+  TY L+++ L      D+V  + 
Sbjct: 146 KLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQIL 205

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
             M  +GH  +  ++   + +         A  + +Q +      ST MYN +L  LVK 
Sbjct: 206 TAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKG 265

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNI--------------------------------- 266
                AV +F +  +   QPD  TF I                                 
Sbjct: 266 GFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTF 325

Query: 267 --LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
             LI  L + G + +A +FF  M +  CSP++VTY TL++GL +   +    E+  E+K 
Sbjct: 326 TVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMK- 384

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           ++  SPD + Y ++I G  K G+ D A G++ EM   G+ P+  T+N++I   GK G   
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQP 444

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN------------ 432
            A  +   +   G +PDV T+++LID   + GQ+++ L +  EM  K             
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAG 504

Query: 433 -------------------LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
                               S    T+  L++A      +++A + L+ +K ++ +P   
Sbjct: 505 HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV 564

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            Y  ++DG  KAG +DEA  ++ EME++ C+P  VT++ L+     + +  E++S+F++M
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +R GC  D  T + +I+CL K    ++A  +  R  E+
Sbjct: 625 VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 201/388 (51%), Gaps = 1/388 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY+LV+  LC+    D    VF  M+ +G  P     +  +SS ++  K D A  + ++ 
Sbjct: 635  TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            +   +   TF+YN ++N LVK N  DEA  +          PD +T+  L+ GL + G +
Sbjct: 695  QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++AF  F  M   G  PD+V Y +L+  L +  +++    + + +  K    PDVVTY+S
Sbjct: 755  EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA-KKRCVPDVVTYSS 813

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I    K G++++A   +    S G  P+   ++ LID FGK G +  A  + E M    
Sbjct: 814  LIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQ 873

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              P++VT+++L+ G  + G+LN   KL +EM+     P++ T+ ILI+ + K   +++A 
Sbjct: 874  CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAE 933

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + K++K   +VP    +  +I+   K   + EA  +   MEE+   P  VT+ +LI   
Sbjct: 934  SYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDIL 993

Query: 518  CMKGRMVEAISIFNKMLRIGCAPDDITV 545
               G++ EA  IF++M   GC PD IT+
Sbjct: 994  GRAGKVHEAAMIFHEMKVKGCMPDGITI 1021



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 216/453 (47%), Gaps = 35/453 (7%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL  + +  TY  ++  L + G  +    VF  M+ +   P++      +    +AG+ D
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEAD 409

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A GL  + +   +  +   YN +++ L K     EA  +F +     + PD +T+N LI
Sbjct: 410 MACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLI 469

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCS------------------------PDI-------V 297
             L + G++ K      +M   G                          P +       +
Sbjct: 470 DVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEI 529

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYNTL+S       V    +LL EV  K E  P VVTYT+++ G  K G++D+A  +  E
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLL-EVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G +PS VT++ L+  F K      +  + + M+  G + DV T+S +I+  C++  
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++Q L +   MK + + P +  +  L+++L K+ +++ A +   +L+ + LVP  F+YN 
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +++G  K+  VDEA  +V  M+ +   PD  T+T L+ G    GR+ EA ++F KM   G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 538 CAPDDITVNSLISCLLKGGMPNEA---FRIMQR 567
             PD +   SL+  L KGG  + A   FR M +
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 204/450 (45%), Gaps = 34/450 (7%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N S   YN V+  L + G + S  +VF  +      P++     FV S  R+G+ D A  
Sbjct: 249 NPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAE 308

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            + +     +      +  L++ALVK  N DEA   F     L   P+  T+  L+ GL+
Sbjct: 309 PIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLA 368

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G +++A E F +M    CSPD + YNTLI GL +  E      L KE+K +    P++
Sbjct: 369 KAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRG-LVPNL 427

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  +IS   K G+  +A  +++++   G  P   T+N LID  GK G M     + + 
Sbjct: 428 RTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKE 487

Query: 393 M--------------------------------LSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           M                                L F  L + +T+++L+  +  NG +++
Sbjct: 488 MVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGE-ITYNTLMSAFIHNGHVDE 546

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            +KL + MK     P V T+T L++ L K  RL++A   L++++     P    Y+ ++ 
Sbjct: 547 AVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMA 606

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            F K    +E+  +  EM  K C  D  T++++I   C    + +A+ +F +M   G  P
Sbjct: 607 SFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEP 666

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                 +L+S L+K    + A +I     E
Sbjct: 667 LLGNYKTLLSSLVKDEKIDFALQIFNELQE 696



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 200/449 (44%), Gaps = 32/449 (7%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN+++  L + G       +F  ++  G +P+       +    + G+ D    ++
Sbjct: 426 NLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAII 485

Query: 215 SQF--RPGEVTMS-----------------------------TFMYNSLLNALVKQNNAD 243
            +   + GE  +S                                YN+L++A +   + D
Sbjct: 486 KEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVD 545

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           EAV + +   +    P   T+  L+ GL + G + +A     +M   GC P +VTY++L+
Sbjct: 546 EAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           +   + ++      L  E+  K   + DV TY+ VI+  CK   +D+A  ++  M   G+
Sbjct: 606 ASFYKRDQEEESLSLFDEMVRKGCVA-DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGM 664

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P    +  L+    K   +  A  +   +     +PD   ++ +++G  ++ ++++  K
Sbjct: 665 EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACK 724

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L D MK +N+ P+++T+T L++ L K  RL +A     ++      P    Y  ++D   
Sbjct: 725 LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLG 784

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G +  A +I   M +KRC PD VT++ LI     +GR+ EA   F   +  GC P+  
Sbjct: 785 KGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVG 844

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
             +SLI    K GM + A  + +     Q
Sbjct: 845 VYSSLIDSFGKKGMVDRALELFEEMQRRQ 873



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 178/427 (41%), Gaps = 34/427 (7%)

Query: 183 RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
           + DG+          +     A + DA   +L+        +S  +  SLL      NN 
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
             A+ +F +       P T  +N +++ L + G    A   F  +G F   PD  T+   
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           +    R   +    E ++E+  KS   P V T+T +I    K G +D+A   +N M +  
Sbjct: 294 VHSFNRSGRLDPAAEPIQEM-IKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P+ VT+  L++G  K G +  A  +   M      PD + +++LIDG  + G+ +   
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  EMK + L PN+ T+ I+I+ L K  R  +A +    LK    VP  F YN +ID  
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472

Query: 483 CKAGNVDEANVIVAEMEEK--RC-----------------------------KPDKVTFT 511
            K G +D+   I+ EM EK   C                                ++T+ 
Sbjct: 473 GKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYN 532

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            L+      G + EA+ +   M +  C P  +T  +L+  L K G  +EA  ++ R  E 
Sbjct: 533 TLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLL-REMEK 591

Query: 572 QNLQLPS 578
           Q  + PS
Sbjct: 592 QGCE-PS 597



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 35/145 (24%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYN+++  + +MG+ D  +  F  M+  G +P+                           
Sbjct: 915  TYNILIDGVGKMGMVDEAESYFKRMKEKGIVPD--------------------------- 947

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                       + SL+ +L K +   EA  +F         P   T+N+LI  L R G+V
Sbjct: 948  --------VITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKV 999

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTL 302
             +A   F++M   GC PD +T   +
Sbjct: 1000 HEAAMIFHEMKVKGCMPDGITIGIM 1024


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 182/341 (53%), Gaps = 6/341 (1%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRL-YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GS 289
           +L  L +     +A+  F     L ++QPD  ++  LI GL ++G V  AF+ F  M  +
Sbjct: 16  ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            GC P+  TYN L+ GLC+ + +     ++ E + K +F+PDVVTY ++++   +LG++D
Sbjct: 76  GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEAR-KRDFAPDVVTYNTLMAALFQLGRVD 134

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A   + +M   G  P+ V+FN +I G  +   +  A  +   M+   + P++VT+S +I
Sbjct: 135 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVI 194

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG C++ QL++  +L D M  +   P++  +T L+       RL+ A   L+++     +
Sbjct: 195 DGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI 254

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  VID  CK G VD+A+ I  E+   +C P+ VT++ LI G+C   R+ E   +
Sbjct: 255 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 314

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +M    C P+ +T N++I  L       EA+ + +  SE
Sbjct: 315 MREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 352



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 172/310 (55%), Gaps = 1/310 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFF-YDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           Q +  T +I++QGL R G V +A E F   +      PD+V+Y TLI+GLC++  V    
Sbjct: 7   QCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAF 66

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +L +++       P+  TY +++ G CK  ++D A  +  E       P  VT+N L+  
Sbjct: 67  DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAA 126

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             ++G +  A     +M   GY+P +V+F+++I G CR  +L   L++ +EM  ++  PN
Sbjct: 127 LFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPN 186

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           + T++++I+ LCK ++L++A++ L ++      P    Y P++ GF  AG +D A  ++ 
Sbjct: 187 LVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR 246

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  + C PD VT+T++I   C  GR+ +A  IF +++   C+P+ +T ++LI    +  
Sbjct: 247 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRAS 306

Query: 557 MPNEAFRIMQ 566
             +E  ++M+
Sbjct: 307 RVDEGGKVMR 316



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 168/339 (49%), Gaps = 8/339 (2%)

Query: 141 KFLEFSRVNLSLNHS---FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEF 196
           + LE    +L L H+     +Y  ++  LC++G  D+   +F  M + G   PN+     
Sbjct: 28  QALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 87

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            V    +  + DAA+ ++++ R  +       YN+L+ AL +    DEA+  F +     
Sbjct: 88  LVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 147

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             P   +FN +I GL R   +  A E F +M      P++VTY+ +I GLC+ +++    
Sbjct: 148 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ 207

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +LL  +       PD+V YT ++ G+   G++D A G+   M S G  P  VT+ V+ID 
Sbjct: 208 QLLDRM-VSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 266

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             KVG +  A  +   +++    P+VVT+S+LI GYCR  ++++G K+  EM  +   PN
Sbjct: 267 LCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PN 323

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           V T+  +I  L   +R  +A    +++     VP    Y
Sbjct: 324 VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 14/256 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN +M +L ++G  D     F  M  +G++P        ++   RA +   A  + ++ 
Sbjct: 119 TYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM 178

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P  VT     Y+ +++ L K +  DEA  +         +PD   +  L+ G S
Sbjct: 179 IDRDFHPNLVT-----YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS 233

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
             G +  A      M S GC PD+VTY  +I  LC+V  V   HE+ +E+   ++ SP+V
Sbjct: 234 AAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL-VANKCSPNV 292

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY+++I GYC+  ++D+   +  EM     +P+ VT+N +I G   V     A  M   
Sbjct: 293 VTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFRE 349

Query: 393 MLSFGYLPDVVTFSSL 408
           M   G++PD  T+  L
Sbjct: 350 MSECGFVPDARTYRGL 365



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 2/146 (1%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           M  + +  N  T +I++  LC+  R+  A   F   L+     P    Y  +I+G CK G
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 487 NVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
            VD A  +  +M     C+P+  T+  L+ G C + R+  A ++  +  +   APD +T 
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 546 NSLISCLLKGGMPNEAFRIMQRASED 571
           N+L++ L + G  +EA     + +E+
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEE 146



 Score = 42.0 bits (97), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +V+  LC++G  D    +F  + ++   PN       +    RA + D    ++ + 
Sbjct: 259 TYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 318

Query: 218 --RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
             RP  VT     YN+++  L   +  +EA  MF+E       PD  T+  L + L  I
Sbjct: 319 ACRPNVVT-----YNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMI 372


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 209/442 (47%), Gaps = 40/442 (9%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +   Y + + SLC+ G       +   M+  G  PN       +S   R GK + A G+ 
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  +   Y++L+N L  +   + A+ +F+      S P+T T+N++I+G   I
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYN---------------------------------- 300
           G ++KA   F  M   G SP+++TYN                                  
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 301 -TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
             LISG  R  ++     L  E+  +   SP+VVTY ++I+GY  + K+D A  ++ +M 
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEM-VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV 544

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  PS+ T+N++I GF K   +  AE    +M+  G LP+V+T++S IDG C+NG+ +
Sbjct: 545 ESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTS 604

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
              K+  EMK ++  PN+ T++ LI+ LC+E +  DA R L     +   P    Y  ++
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLV 660

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
            G C  G   EA+ +V  M++K  +P +  +  L++G C    +  A+ IF+ M+  G  
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ 720

Query: 540 PDDITVNSLISCLLKGGMPNEA 561
           P      +LI  L K     +A
Sbjct: 721 PCLSDYKALICALCKANFRQKA 742



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 189/384 (49%), Gaps = 1/384 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           V+  M + G  PN       +      GK   A+ ++           TF Y SL+    
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  N D A  MF    +    P++ T++ LI GL   G +++A +   +M   G  P + 
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            Y   I  LC         +LL ++K K    P+V TYT++ISG  + GK + A G+Y++
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMK-KRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M + G+ P+AVT++ LI+     G   +A  + E MLS   LP+  T++ +I G+C  G 
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +   + D+M     SPNV T+ I+I+   K+  +N+A R L+ +K N L    + Y  
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I GF + G ++ A  +  EM E    P+ VT+  +I G+    ++ +A+++F KM+  G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547

Query: 538 CAPDDITVNSLISCLLKGGMPNEA 561
             P   T N +IS   K    +EA
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEA 571



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 195/413 (47%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G  D    +FD M  DG  PNS      ++     G+ + A  +L + 
Sbjct: 239 TYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEM 298

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y   + +L     + EAV +  +  +    P+  T+  LI GLSR G+ 
Sbjct: 299 IDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKF 358

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A   ++ M + G  P  VTY+ LI+ L           +  E     +  P+  TY  
Sbjct: 359 EVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF-EWMLSHDSLPNTETYNV 417

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C +G + KAT I+++M   G  P+ +T+N++I  + K G M +A  + E M   G
Sbjct: 418 IIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNG 477

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D  T+++LI G+ R G+L     L +EM    +SPNV T+  +IN      +++DA 
Sbjct: 478 LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDAL 537

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  +  VP    YN +I GF K   + EA     +M ++   P+ +T+T  I G 
Sbjct: 538 ALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGL 597

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C  GR   A  IF++M +    P+  T +SLI  L + G   +A R++    E
Sbjct: 598 CKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCE 650



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 9/416 (2%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +N L V  R +     L   E+   + SL ++ +TYN++++  C +G       +FD M 
Sbjct: 384 INQLYVEGRFET---ALTIFEWMLSHDSLPNT-ETYNVIIKGFCSIGYIQKATAIFDQML 439

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
             G  PN       +    + G  + A  LL   +   + + T+ Y +L++   +    +
Sbjct: 440 KAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLE 499

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A  +F E       P+  T+N +I G   + +V  A   F+ M   G  P   TYN +I
Sbjct: 500 HAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMI 559

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           SG  + N ++       ++  K    P+V+TYTS I G CK G+   A  I++EM     
Sbjct: 560 SGFSKTNRISEAENFCGKM-VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+  T++ LIDG  + G    A    ER+L  G  P+V T+++L+ G C  G+  +  +
Sbjct: 619 FPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQ 674

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L + MK K L P+   +  L+   CK   +  A +    +      P    Y  +I   C
Sbjct: 675 LVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALC 734

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           KA    +A  +   M +K    D+V +T+L+ G   +G    ++ + + M    C 
Sbjct: 735 KANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCT 790



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 2/321 (0%)

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           ++F+ L+  L +        + + +M + G  P++ T+N +I  LC   +V     ++  
Sbjct: 168 YSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGH 227

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F     PD  TYTS+I G+CK G +D A  +++ M   G  P++VT++ LI+G    G
Sbjct: 228 I-FHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEG 286

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  M E M+  G  P V  ++  I   C  G+  + +KL  +MK +   PNV T+T
Sbjct: 287 RLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYT 346

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ L ++ +   A     ++  + LVP    Y+ +I+     G  + A  I   M   
Sbjct: 347 ALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSH 406

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              P+  T+ ++I G C  G + +A +IF++ML+ G +P+ IT N +I    K G  N A
Sbjct: 407 DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNA 466

Query: 562 FRIMQRASEDQNLQLPSWKKA 582
            R+++   +   L+L +W  A
Sbjct: 467 MRLLEMM-KGNGLKLDTWTYA 486



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 6/259 (2%)

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK---ATGIYNEMNSCGIKPSA 367
           EV R  ++L E+    +F   + ++++++    +LGK D       +Y EM + GI+P+ 
Sbjct: 146 EVKRVIQVLSEINTTYDFGYTLYSFSTLL---IQLGKFDMDGLGRDVYIEMLNSGIRPNL 202

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            TFN +I      G +  AE +   +  +G  PD  T++SLI G+C+NG L+   ++ D 
Sbjct: 203 FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDR 262

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M      PN  T++ LIN LC E RL +A   L+++    + P    Y   I   C AG 
Sbjct: 263 MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGR 322

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             EA  ++ +M+++ C P+  T+T LI G    G+   AI +++KML  G  P  +T ++
Sbjct: 323 SCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSA 382

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           LI+ L   G    A  I +
Sbjct: 383 LINQLYVEGRFETALTIFE 401



 Score = 42.0 bits (97), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 3/179 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++R LC  G       + + M+  G  P+  +    +    +  + ++A  +    
Sbjct: 655 TYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y +L+ AL K N   +A  MF+   + +   D   + +L+ GL + GE 
Sbjct: 715 VTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGET 774

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTL---ISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             + E  + M S  C+ +  T   L   +S L    E+ +  + L  VK K + + DV+
Sbjct: 775 DLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVKEKQKQTADVL 833


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 200/362 (55%), Gaps = 4/362 (1%)

Query: 205 GKCDAAKGLL-SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           G+ +  +GL+ +++  G V  + F YN L++   ++ +    + +  E       P   T
Sbjct: 95  GRVEEGRGLIEARWGEGCVPGAVF-YNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVT 153

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  +I  L R G++ K      +M + G SP++  YNT+I+ LC+    ++  ++L ++ 
Sbjct: 154 YGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQM- 212

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            KS F+PDVVT+ ++I+G+C+ G + +A  +  E    G++P+ +++  LI GF   G  
Sbjct: 213 VKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEA 272

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           + A  +   M+  G+ PD++T  +LI G   +GQ+N  L + ++M  + + P+   + +L
Sbjct: 273 MVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVL 332

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK+  L+ A+  L+++    + P  F+Y  +IDGF ++  + +A  I   MEEK C
Sbjct: 333 ISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC 392

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            PD V + ++I G+C  G M EA++  + M + GC PD+ T  +L+    K G  + + R
Sbjct: 393 -PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLR 451

Query: 564 IM 565
           ++
Sbjct: 452 LL 453



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 186/389 (47%), Gaps = 2/389 (0%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           +++R LC  G  +  + + +    +G +P +      +    R G       LL +    
Sbjct: 86  VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK 145

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
            +  +   Y ++++ L ++ +  +   +  E       P+   +N +I  L +     +A
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
            +    M     +PD+VT+NT+I+G CR  +V    +LL+E   +    P+ ++YT +I 
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREA-IRRGLEPNQLSYTPLIH 264

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G+C  G+   A+ +  EM   G  P  +T   LI G    G +  A  +RE+M     +P
Sbjct: 265 GFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMP 324

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D   ++ LI G C+   L+    L +EM  + + P+ + +T LI+   + ++L+DAR+  
Sbjct: 325 DANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF 384

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           + ++     P    YN +I G+CK G + EA   ++ M +  C PD+ T+T L+ G+  K
Sbjct: 385 EFME-EKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKK 443

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           G +  ++ +   M++  C P+  T  SLI
Sbjct: 444 GDISASLRLLCDMMKRRCKPNIFTYASLI 472



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 202/456 (44%), Gaps = 45/456 (9%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C  G      ++   M + G +P        +    R G     + LL + R
Sbjct: 119 YNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMR 178

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++ +  +YN+++NAL K  +A +A  M  +  +    PD  TFN +I G  R G+V+
Sbjct: 179 ARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVR 238

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE-----------VARGHE---------- 317
           +A +   +    G  P+ ++Y  LI G C   E           + RGH           
Sbjct: 239 EALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALI 298

Query: 318 -------------LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                        +++E   + +  PD   Y  +ISG CK   +  A  +  EM    ++
Sbjct: 299 HGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQ 358

Query: 365 PSAVTFNVLIDGFGKVGNMVSA----EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           P    +  LIDGF +   +  A    E+M E+       PD+V ++ +I GYC+ G + +
Sbjct: 359 PDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-----PDIVAYNVMIKGYCKFGMMKE 413

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            +     M+     P+ +T+T L++   K+  ++ + R L  +      P  F Y  +I 
Sbjct: 414 AVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLIC 473

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+C  G+   A  + A+M+ +   P+ V +T+LI     K ++++A + F  ML   C P
Sbjct: 474 GYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPP 533

Query: 541 DDITVNSLISCLL--KGGMPNEAFRIMQRASEDQNL 574
           +D TV+ L++ L+  + GM N      ++A E   L
Sbjct: 534 NDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSAL 569



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 155/328 (47%), Gaps = 1/328 (0%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           + A  ++ E        D ++  ++++GL   G V++           GC P  V YN L
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G CR  ++ RG  LL E++ K    P VVTY ++I    + G + K   +  EM + G
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKG-IIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARG 181

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P+   +N +I+   K  +   A  M  +M+   + PDVVTF+++I G+CR G + + L
Sbjct: 182 LSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREAL 241

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL  E   + L PN  ++T LI+  C       A   L ++      P       +I G 
Sbjct: 242 KLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGL 301

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
             +G V++A ++  +M E++  PD   + +LI G C K  +  A ++  +ML     PD 
Sbjct: 302 VVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDK 361

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
               +LI   ++    ++A +I +   E
Sbjct: 362 FIYTTLIDGFVRSDKLSDARKIFEFMEE 389



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 199/441 (45%), Gaps = 35/441 (7%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCI 202
           V    N    T+N ++   C  G + ++++++ + +R  G  PN    +P+I  F   C+
Sbjct: 213 VKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRR-GLEPNQLSYTPLIHGF---CV 268

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           R G+   A  LL +      T       +L++ LV     ++A+ + ++       PD  
Sbjct: 269 R-GEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDAN 327

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            +N+LI GL +   +  A     +M      PD   Y TLI G  R ++++   ++ + +
Sbjct: 328 IYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFM 387

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           + K+   PD+V Y  +I GYCK G M +A    + M   G  P   T+  L+DG+ K G+
Sbjct: 388 EEKA--CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGD 445

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           + ++  +   M+     P++ T++SLI GYC  G       L  +M+ + L PNV  +T+
Sbjct: 446 ISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTV 505

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF--CKAGNVDEANVIVAEMEE 500
           LI +L K++++  A  + + +  N   P     + +++G   C+ G V+       +  E
Sbjct: 506 LIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHE 565

Query: 501 KRC-------------KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           K                P    +  +I   C    + +A+ + +KM   GC PD IT  S
Sbjct: 566 KSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLS 625

Query: 548 LI--------SCLLKGGMPNE 560
           L+        S   +  +PNE
Sbjct: 626 LLYGFSSAGESGKWRSALPNE 646



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 139/262 (53%), Gaps = 3/262 (1%)

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           E ARG  L  E+  + E   D  +   ++ G C  G++++  G+       G  P AV +
Sbjct: 63  ERARG--LYGEMLVR-EGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFY 119

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           NVLIDG+ + G++     +   M + G +P VVT+ ++I    R G L +   L  EM+ 
Sbjct: 120 NVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRA 179

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + LSPNV  +  +INALCK    + A   L Q+  +   P    +N +I GFC+ G+V E
Sbjct: 180 RGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVRE 239

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  ++ E   +  +P+++++T LI G C++G  + A  +  +M+  G  PD IT+ +LI 
Sbjct: 240 ALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIH 299

Query: 551 CLLKGGMPNEAFRIMQRASEDQ 572
            L+  G  N+A  + ++ +E Q
Sbjct: 300 GLVVSGQVNDALIVREKMAERQ 321



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 1/272 (0%)

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            ++ GLC    V  G  L+ E ++     P  V Y  +I GYC+ G + +   +  EM +
Sbjct: 86  VMVRGLCLEGRVEEGRGLI-EARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMET 144

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            GI P+ VT+  +I   G+ G++   E +   M + G  P+V  ++++I+  C+    +Q
Sbjct: 145 KGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQ 204

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              + ++M     +P+V TF  +I   C+E  + +A + L++     L P    Y P+I 
Sbjct: 205 ASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIH 264

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           GFC  G    A+ ++ EM  +   PD +T   LI G  + G++ +A+ +  KM      P
Sbjct: 265 GFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMP 324

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           D    N LIS L K  M + A  +++   E +
Sbjct: 325 DANIYNVLISGLCKKRMLSAAKNLLEEMLEQK 356



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 21/219 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG----- 212
           TY  ++   C +G   S + +F  M+S+G  PN       + S  +  K   A       
Sbjct: 467 TYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHM 526

Query: 213 LLSQFRPGEVTMSTFMYNSLLN---ALVKQNNAD-----EAVYMFKEYFRLYSQ---PDT 261
           LL+   P + T+  ++ N L+N    +V  N +D     E   +   +  L S    P  
Sbjct: 527 LLNHCPPNDATVH-YLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRI 585

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             +N +I  L R   + KA +    M + GC PD +T+ +L+ G     E  +    L  
Sbjct: 586 SAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPN 645

Query: 322 VKFKSEFSPDVVTYTSVISGYCK---LGKMDKATGIYNE 357
              + EF   +  Y ++ + +     +G++ +   +Y+E
Sbjct: 646 EFQQDEFEI-ITKYMALFNQHVTSSVVGEVSRILQLYSE 683


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 208/417 (49%), Gaps = 15/417 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S + +   +R L   G  D VQ     MR  G       +   + +  RAG  D  + L 
Sbjct: 50  SARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSAD--RALK 107

Query: 215 SQFRPGEVTM---STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           + +R  ++        +YN LL+AL+++N     V ++    +    P+ +T+N+LI+ L
Sbjct: 108 TFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRAL 167

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV--ARGHELLKEVKFKSEFS 329
            +   V  A +   +M   GC PD V++ T++SG+C++  V  ARG        F +E  
Sbjct: 168 CQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARG--------FLAETV 219

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P   +Y +V+   C   +M +   + NEM   G++P+ VT+  ++D F K   +  A  +
Sbjct: 220 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 279

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             RM+S G  P+V+TF++L+ G+  +G+++  L +   M  +  +P+  ++ +LI  LC 
Sbjct: 280 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 339

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L  A  F   +K N L+P    Y+ ++DGF  AG++D A +I  EM+   CKP+ V 
Sbjct: 340 IGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV 399

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +T +I   C K    +A S+ +KML   C P+ +T N+LI  L   G    A  +  
Sbjct: 400 YTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFH 456



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 189/401 (47%), Gaps = 10/401 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++R+LC+    D+ + + D M   G  P+       VS   + G+ + A+G L++ 
Sbjct: 159 TYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET 218

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P + +     YN++++AL  +    E   +  E  +   QP+  T+  ++    +  E+
Sbjct: 219 VPVQAS-----YNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKAREL 273

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--FSPDVVTY 335
           + A      M S GC+P+++T+  L+ G     E  + H+ L    +  +  ++P  ++Y
Sbjct: 274 RMACAILARMVSMGCTPNVLTFTALVKGF---FEDGKVHDALSMWHWMVDEGWAPSTISY 330

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I G C +G +  A   +N M    + P+A T++ L+DGF   G++  A  +   M S
Sbjct: 331 NVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKS 390

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+VV ++++ID  C+    +Q   L D+M   N  PN  TF  LI  LC   R+  
Sbjct: 391 SGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGR 450

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A      ++ N   P    YN ++ G  + GN  +A  +V EM     +   VT+  +I 
Sbjct: 451 ALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVIN 510

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             C       A+ +  +M+  G  PD  T N++I    K G
Sbjct: 511 CLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEG 551



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 149/367 (40%), Gaps = 36/367 (9%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  +  TY  ++ + C+         +   M S G  PN       V      GK 
Sbjct: 249 VQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKV 308

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  +           ST  YN L+  L    +   A+  F    R    P+  T++ L
Sbjct: 309 HDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 368

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIV------------------------------ 297
           + G S  G++  A   + +M S GC P++V                              
Sbjct: 369 VDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC 428

Query: 298 -----TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
                T+NTLI  LC    V R   +   ++ ++   P+  TY  ++ G  + G    A 
Sbjct: 429 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMR-RNGCHPNDRTYNELLHGLFREGNHKDAF 487

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +  EM + G + S VT+N +I+   ++     A  +  RM+  G  PD  TF+++I  Y
Sbjct: 488 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 547

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G+++    L  +M   N   NV  +TILI+ LC + +L++A  +L ++ +  + P  
Sbjct: 548 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 607

Query: 473 FMYNPVI 479
             +N ++
Sbjct: 608 ATWNVLV 614


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 206/415 (49%), Gaps = 45/415 (10%)

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAK-GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           HL  SP +   + +   A +  A    L +Q +   V +     + LL++L     +  A
Sbjct: 45  HLSASPSLPHLLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSL----PSAPA 100

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             +F + +RL     T TFNI+++ L   G+  +A E    M      P+ VTYNT+I+G
Sbjct: 101 FALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAG 156

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IK 364
            C    V    E+++E++ +   +PD  TY ++ISG+CK+G+M+ A  +++EM + G + 
Sbjct: 157 FCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVA 216

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF---------------------------- 396
           PSAV +N LI G+  VG +  A   RE M+                              
Sbjct: 217 PSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAV 276

Query: 397 -------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
                  G+ PDV T++ LI+GYC+ G   + L++ +EM  K +     T+T LI    +
Sbjct: 277 LEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSR 336

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           + ++ +  R         + P   MYN +I+  C  G+++ A  I+AEME+KR  PD +T
Sbjct: 337 KGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMT 396

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +  L+ G C+ GR+ EA ++ ++M + G  PD ++ N+LIS     G   +A R+
Sbjct: 397 YNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 206/413 (49%), Gaps = 9/413 (2%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F +  R+ L L  +  T+N+++R LC  G       +   M     +  + +I  F   C
Sbjct: 104 FADIYRLRLPLCTT--TFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGF---C 158

Query: 202 IRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQP 259
            R G+  AA  ++ + R  G +    + Y +L++   K    ++AV +F E   +    P
Sbjct: 159 AR-GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAP 217

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
               +N LI G   +G++  A ++  DM   G +  + TYN L+  L      +  + +L
Sbjct: 218 SAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVL 277

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E++ K+ FSPDV TY  +I+GYCK G   KA  ++ EM+  G++ +AVT+  LI  F +
Sbjct: 278 EEMQ-KNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSR 336

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + +    +  G  PDVV +++LI+ +C  G + +  ++  EM+ K + P+  T
Sbjct: 337 KGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMT 396

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L+   C   RL++AR  + ++    + P    YN +I G+   G++ +A  +  EM 
Sbjct: 397 YNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMM 456

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +K   P  +T+  LI G C   +  +A ++  +M+  G  PDD T  SLI  L
Sbjct: 457 DKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 178/391 (45%), Gaps = 55/391 (14%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNP------------------KLGLKFLEFSRVNLSLNHSF 156
           R+LC    P+ +LE+++++  P                  +  L+ +   R    +    
Sbjct: 124 RHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDK 183

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            TY  ++   C++G  +    VFD M + G + P++ M    +      GK D A     
Sbjct: 184 YTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRE 243

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                 + M+   YN L++AL     A +A  + +E  +    PD +T+NILI G  + G
Sbjct: 244 DMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEG 303

Query: 276 EVKKAFEFFYDMGSFGCS-----------------------------------PDIVTYN 300
             KKA E F +M   G                                     PD+V YN
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI+  C   ++ R +E++ E++ K    PD +TY +++ G+C LG++D+A  + +EM  
Sbjct: 364 ALINSHCTGGDMERAYEIMAEME-KKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTK 422

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            GI+P  V++N LI G+   G++  A  +R+ M+  G+ P ++T+++LI G C+  Q + 
Sbjct: 423 RGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDD 482

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
              L  EM  K ++P+  T+  LI  L  E+
Sbjct: 483 AENLMKEMVAKGITPDDSTYISLIEGLTTED 513



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 6/205 (2%)

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            TFN+++      G  V A  +  +M      P+ VT++++I G+C  G++   L++  E
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMRE 172

Query: 428 MKGKN-LSPNVYTFTILINALCKENRLNDARR-FLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           M+ +  ++P+ YT+  LI+  CK  R+ DA + F + L   ++ P   MYN +I G+C  
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV 232

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D A     +M ++       T+ +L+    M  R  +A ++  +M + G +PD  T 
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292

Query: 546 NSLISCLLKGGMPNEAFRIMQRASE 570
           N LI+   K G   +A  + +  S+
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQ 317



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 64/153 (41%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ S C  G  +    +   M      P+       +      G+ D A+ L+ +  
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +      YN+L++    + +  +A+ +  E       P   T+N LIQGL +I +  
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGD 481

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
            A     +M + G +PD  TY +LI GL   +E
Sbjct: 482 DAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 215/418 (51%), Gaps = 4/418 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L+L  S  TYN ++ +L      D +  V++ +++ G   N       +    R  +   
Sbjct: 197 LNLQVSIATYNSLLYNLRHT---DIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQD 253

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A   L +    E   S   +N+L++   K  + D A   F    +    PD +++NIL+ 
Sbjct: 254 AVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLH 313

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL   G +++A EF  DM + G  PDIVTYN L +G  R+  +  G   + +    +  +
Sbjct: 314 GLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF-RILGLISGAWKVVQRMLLNGLN 372

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD+VTYT +I G+C++G ++++  +  +M S G+K S VT+ VL+    K G +  A  +
Sbjct: 373 PDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVIL 432

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  PD++T+S LI G C+ G + + ++L +EM  K + PN +  + +I+ L +
Sbjct: 433 LHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE 492

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +  +++A+ +   +  +D+  +  +YN +IDG+ K GN+ EA     ++ EK   P  VT
Sbjct: 493 KGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVT 552

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           F  LI G C KG++ EA+ + + +   G  P  +T  +L++   + G  +  F ++  
Sbjct: 553 FNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 610



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 187/369 (50%), Gaps = 1/369 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++      +GL      V   M  +G  P+       +    + G  + +  L  + 
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +S   Y  LL++L K    DEAV +  E   +  +PD  T+++LI GL + G V
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAV 461

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E + +M S    P+    + +ISGL     ++        V  KS+ + +++ Y  
Sbjct: 462 EEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT-KSDVAEEIILYNI 520

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY KLG + +A   Y ++   GI P+ VTFN LI GF K G +  A  + + +   G
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 580

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P  VT+++L++GYC  G ++    +  EM+ K + P   T+T+++  LCKE RL+++ 
Sbjct: 581 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESV 640

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + LK +    L P    YN VI  FCKA ++ +A  +  +M +   +P  VT+ +LI G 
Sbjct: 641 QLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700

Query: 518 CMKGRMVEA 526
           C+ G + +A
Sbjct: 701 CVYGNLKDA 709



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 200/410 (48%), Gaps = 1/410 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  ++N +M   C+MG  D  +  F  M   G LP+       +     AG  + A    
Sbjct: 269 SVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +      V      YN L N          A  + +        PD  T+ ILI G  ++
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G ++++F+    M S G    IVTY  L+S LC+   +     LL E++      PD++T
Sbjct: 389 GNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG-LKPDLLT 447

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G CK G +++A  +Y EM S  I P++   + +I G  + G +  A+   + + 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 +++ ++ +IDGY + G + + ++   ++  K +SP + TF  LI   CK+ +L 
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A + L  +K + LVP    Y  +++G+C+ G++     ++ EME K  KP ++T+T+++
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            G C +GR+ E++ +   M   G  PD IT N++I    K     +AF++
Sbjct: 628 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQL 677



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 198/413 (47%), Gaps = 1/413 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  S  TY +++ SLC+ G  D   ++   M   G  P+       +    + G  + A 
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  +     +  ++F+ +++++ L ++    EA   F    +     +   +NI+I G 
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           +++G + +A   +  +   G SP IVT+N+LI G C+  ++A   +LL  +K      P 
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG-LVPT 584

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VTYT++++GYC+ G M     + +EM +  IKP+ +T+ V++ G  K G +  +  + +
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M + G  PD +T++++I  +C+   L +  +L ++M   +L P+  T+ +LIN LC   
Sbjct: 645 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 704

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L DA R L  L+   +      Y  +I   C  G+V  A V   +M E+  +     ++
Sbjct: 705 NLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYS 764

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +I   C +  + +A   F  ML  G  PD      +++   + G PN  F I
Sbjct: 765 AVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEI 817



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 200/386 (51%), Gaps = 1/386 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           LN    TY +++   C+MG  +    + + M S G   +       +SS  ++G+ D A 
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            LL +     +      Y+ L++ L K+   +EA+ +++E       P+++  + +I GL
Sbjct: 431 ILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 490

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              G + +A  +F  +     + +I+ YN +I G  ++  +       K++  K   SP 
Sbjct: 491 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG-ISPT 549

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +VT+ S+I G+CK GK+ +A  + + +   G+ P++VT+  L++G+ + G+M S   M  
Sbjct: 550 IVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLH 609

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M +    P  +T++ ++ G C+ G+L++ ++L   M  + L P+  T+  +I + CK +
Sbjct: 610 EMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAH 669

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L  A +   Q+  + L P P  YN +I+G C  GN+ +A+ ++  ++++  +  KV +T
Sbjct: 670 DLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYT 729

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIG 537
            +I  HC KG +  A+  F++M+  G
Sbjct: 730 TIIKAHCAKGDVQNALVFFHQMVERG 755



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 214/457 (46%), Gaps = 22/457 (4%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHL 188
           R+DN    L   +  R      HS  ++ +V   +   G    ++ V + M      G  
Sbjct: 91  RVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSA 150

Query: 189 P---------------NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           P               N+ + +    +  RA     A  +L++ +   + +S   YNSLL
Sbjct: 151 PSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL 210

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
             L    + D    ++ E        + +T  ILI GL R   ++ A  F  + G     
Sbjct: 211 YNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFG 267

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P +V++N L+SG C++  V         +  K    PDV +Y  ++ G C  G M++A  
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFC-MMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
             N+M + G++P  VT+N+L +GF  +G +  A  + +RML  G  PD+VT++ LI G+C
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G + +  KL ++M  + L  ++ T+T+L+++LCK  R+++A   L +++   L P   
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLL 446

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            Y+ +I G CK G V+EA  +  EM  KR  P+    + +I G   KG + EA   F+ +
Sbjct: 447 TYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSV 506

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +   A + I  N +I    K G   EA R  ++  E
Sbjct: 507 TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 543



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 177/410 (43%), Gaps = 40/410 (9%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           L+SL    R+D   + L  +E     + L     TY++++  LC+ G  +    +++ M 
Sbjct: 417 LSSLCKSGRIDEAVILLHEMEV----IGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMC 472

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           S    PNS +    +S     G    A+         +V     +YN +++   K  N  
Sbjct: 473 SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIG 532

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA----------------------- 280
           EAV  +K+       P   TFN LI G  + G++ +A                       
Sbjct: 533 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLM 592

Query: 281 ------------FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
                       F+  ++M +    P  +TY  ++ GLC+   +    +LLK +  +  F
Sbjct: 593 NGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLF 652

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD +TY +VI  +CK   + KA  ++N+M    ++PS VT+NVLI+G    GN+  A+ 
Sbjct: 653 -PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADR 711

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   +         V ++++I  +C  G +   L    +M  +    ++  ++ +IN LC
Sbjct: 712 LLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLC 771

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           K N + DA+ F   +  + + P   +   +++ F ++G+ +    I A M
Sbjct: 772 KRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMM 821


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 216/423 (51%), Gaps = 24/423 (5%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA---- 210
           S  ++N +M   C++GL D  +  F  M   G LP++      +   I AG  + A    
Sbjct: 184 SVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELT 243

Query: 211 -----KGLLSQFRPGEVTMSTFMYNSLLNA---LVKQNNADEAVYMFKEYFRLYSQPDTW 262
                +GL       ++    F    L++    ++++   DE +           +PD  
Sbjct: 244 NDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGL-----------KPDLV 292

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ +LI G  ++G +++A     D+ S G   +++ Y+ L+S LC+  +V    +LL E+
Sbjct: 293 TYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEM 352

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           +  +   PD+VTY+ +I G CK GK+ +A  +Y EM    I P++   + ++ G  + G 
Sbjct: 353 E-ANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGM 411

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A    + ++     PDV  ++ +IDGY + G + + ++L   ++ K ++P++ TF  
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI   CK  ++ +ARR L+ +K + L P    Y  +++ +C+ GN+++ + ++ EM  K 
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            +P  VT+T++I G C + ++ E++ +   M   G APD IT N++I C  K     +AF
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591

Query: 563 RIM 565
            ++
Sbjct: 592 ELL 594



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 209/440 (47%), Gaps = 37/440 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY +V +    +GL    + +   M +D G  P+       +    + G  + A  L   
Sbjct: 257 TYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRD 316

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                  ++  +Y+ LL++L K+   DEA+ +  E      QPD  T++ILI GL + G+
Sbjct: 317 LLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGK 376

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V++A + + +M      P+   ++ ++ GLC    ++        +   S   PDV  Y 
Sbjct: 377 VQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL-IMSNLRPDVTLYN 435

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I GY KLG +++A  +Y  +    I PS VTFN LI GF K   +V A  + E +   
Sbjct: 436 IMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLH 495

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P  VT+++L++ YC  G +N+  +L  EM  K++ P V T+T++I  LCK+ +L ++
Sbjct: 496 GLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEES 555

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKA------------------------------- 485
            + L+ ++   L P    YN +I  FCKA                               
Sbjct: 556 VQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDG 615

Query: 486 ----GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
               G+V++A+ ++  ++++     KV +T +I  HC+KG    A+ +F++M+  G    
Sbjct: 616 LCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVS 675

Query: 542 DITVNSLISCLLKGGMPNEA 561
               +++I+ L K  + NEA
Sbjct: 676 IKDYSAVINRLCKRCLINEA 695



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 212/420 (50%), Gaps = 13/420 (3%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +L  S +TYN ++ +L      D +  V++ ++  G  P S       SS I  G C  +
Sbjct: 113 NLRPSIQTYNSLLYNLRHT---DIMWDVYNDIKDSG-TPQSAR----TSSIIVDGLCGQS 164

Query: 211 KG-----LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           +       L Q    E   S   +N++++   K   AD A   F    +    PDT+++N
Sbjct: 165 RFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYN 224

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ILI GL   G +++A E   DM   G  PD+VTY  +  G   +  ++   E+++++   
Sbjct: 225 ILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTD 284

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PD+VTYT +I G+C++G +++A  +  ++ S G + + + ++VL+    K G +  
Sbjct: 285 EGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDE 344

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   M +    PD+VT+S LI G C+ G++ Q ++L  EM    + PN +  + ++ 
Sbjct: 345 ALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILK 404

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC++  L+DAR +   L  ++L P   +YN +IDG+ K G+V+EA  +   + +K   P
Sbjct: 405 GLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             VTF  LI G C   ++VEA  +   +   G  P  +T  +L++   + G  N+   ++
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELL 524



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 201/408 (49%), Gaps = 3/408 (0%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           Y++++ SLC+ G + +++Q++++ M ++   P+       +    + GK   A  L  + 
Sbjct: 329 YSVLLSSLCKRGQVDEALQLLYE-MEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  ++F ++ +L  L ++    +A   F        +PD   +NI+I G  ++G+V
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   +  +     +P IVT+N+LI G C+  +V     LL+ +K      P  VTYT+
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG-LEPSAVTYTT 506

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++ YC+ G ++K   +  EMN   I+P+ VT+ V+I G  K   +  +  + E M + G
Sbjct: 507 LMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +T++++I  +C+   + +  +L D+M   NL P   T+ +LI+ LC+   + DA 
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDAD 626

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L  L+  ++      Y  +I   C  G+   A  +  +M EK  +     ++ +I   
Sbjct: 627 RVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRL 686

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +  + EA   F  ML  G +PD      +++   + G  +  F ++
Sbjct: 687 CKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 734



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 164/338 (48%), Gaps = 3/338 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +++ LCE G+    ++ FD +      P+  +    +   ++ G  + A  L  + R   
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKA 280
           +T S   +NSL+    K     EA  +  E  +L+  +P   T+  L+      G + K 
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLL-ESIKLHGLEPSAVTYTTLMNAYCEEGNINKL 520

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
            E   +M      P +VTY  +I GLC+  ++    +LL++++ K   +PD +TY ++I 
Sbjct: 521 HELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG-LAPDQITYNTIIQ 579

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
            +CK   M KA  + ++M    ++P+  T+NVLIDG  + G++  A+ +   +       
Sbjct: 580 CFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINL 639

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
             V ++++I  +C  G   + +K+  +M  K    ++  ++ +IN LCK   +N+A+ + 
Sbjct: 640 TKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYF 699

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
             +  + + P   ++  +++ F +AG+V     ++A M
Sbjct: 700 CIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 1/270 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T+N ++   C+       + + + ++  G  P++      +++    G  +    LL
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELL 524

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    ++  +   Y  ++  L KQ   +E+V + ++       PD  T+N +IQ   + 
Sbjct: 525 LEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKA 584

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +++KAFE   DM      P   TYN LI GLCR  +V     +L  ++ ++  +   V 
Sbjct: 585 KDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRN-INLTKVA 643

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I  +C  G   +A  ++++M   G + S   ++ +I+   K   +  A+Y    ML
Sbjct: 644 YTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIML 703

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           S G  PD   F  +++ + R G ++   +L
Sbjct: 704 SDGVSPDQEIFEMMLNAFHRAGHVHSVFEL 733



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 72/150 (48%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           +++K      +  T +I+++ LC ++R  DA  FL+Q    +  P    +N ++  +CK 
Sbjct: 139 NDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKL 198

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G  D A      M +    PD  ++ ILI G  + G M EA+ + N M + G  PD +T 
Sbjct: 199 GLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTY 258

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
             +       G+ + A  I+Q+   D+ L+
Sbjct: 259 KIVAKGFHLLGLMSGAREIIQKMLTDEGLK 288


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 196/393 (49%), Gaps = 1/393 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++   C  G  D  + +FD M   G  PN  +    ++   + G    A  +L   
Sbjct: 82  VYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTM 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + Y  ++  L K   A +A+ +F        +P T T+N+LI GL + G +
Sbjct: 142 TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCI 201

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF-SPDVVTYT 336
             AF+ F  M   G   ++V+YNTLI GLC   ++    +L   +     +  PDV+T+ 
Sbjct: 202 GDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFN 261

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +VI G CK G++DKA  IY+ M   G   +  T ++LI  + K G +  A  + +R+   
Sbjct: 262 TVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKL 321

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +P   T+S +IDG+C+   LN    L   MK   LSP ++ +  L+ +LCKE+ L  A
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQA 381

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           RR  +++K ++  P    +N +IDG  KAG++  A  ++ +M++    PD  T++  I  
Sbjct: 382 RRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINR 441

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
               G+M EA   F+ M+  G  PD+   +SLI
Sbjct: 442 LSKLGQMEEAKGAFDSMIASGITPDNHVYDSLI 474



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 203/406 (50%), Gaps = 3/406 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY ++M  LC+ G  +    +   M+  G   +  +    +S     G  D  K L  + 
Sbjct: 47  TYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM 106

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +  +Y+ L+N   K+    EA  +         QPD +T+  +I GL + G  
Sbjct: 107 LEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRA 166

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KA + F  M   G  P  VTYN LI+GLC+   +    ++ + +  K +   +VV+Y +
Sbjct: 167 RKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGK-RLEVVSYNT 225

Query: 338 VISGYCKLGKMDKATGIYNEMNSCG--IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +I G C  GK+D+A  +++ +   G  ++P  +TFN +I G  K G +  A  + + M+ 
Sbjct: 226 LIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   ++ T   LI  Y ++G +++ ++L   +    L P+  T++++I+  CK + LN 
Sbjct: 286 RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNF 345

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+    ++K + L P  F YN ++   CK  ++++A  +  EM+E  C+PD ++F I+I 
Sbjct: 346 AKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMID 405

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           G    G +  A  + N M ++G  PD  T +S I+ L K G   EA
Sbjct: 406 GTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEA 451



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 168/317 (52%), Gaps = 3/317 (0%)

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           R+   PD  ++N +I GL +   ++KA +   +M    C P+  TY  L+ GLC+   V 
Sbjct: 3   RINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVE 62

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               LL E+K K     DVV Y+++ISG+C  G +D+   +++EM   GI P+ V ++ L
Sbjct: 63  EAMRLLGEMKRKG-LEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I+GF K G    A  +   M   G  PDV T++ +I G C++G+  + L L D M  K  
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+  T+ +LIN LCKE  + DA +  + +       +   YN +I G C  G +DEA  
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 494 IVAEMEE--KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
           + + + E     +PD +TF  +I G C +GR+ +A+ I++ M+  G   +  T + LI  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 552 LLKGGMPNEAFRIMQRA 568
            +K G+ ++A  + +R 
Sbjct: 302 YIKSGIIDKAMELWKRV 318



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 131/248 (52%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD+V+Y ++I+G CK  +++KA  +  EM     +P++ T+ +L+DG  K G +  A  +
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G   DVV +S+LI G+C  G L++G  L DEM  K +SPNV  ++ LIN  CK
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +    +A   L  +    + P  + Y  +I G CK G   +A  +   M EK  +P  VT
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           + +LI G C +G + +A  IF  ML  G   + ++ N+LI  L   G  +EA ++     
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 570 EDQNLQLP 577
           ED N   P
Sbjct: 248 EDGNYVEP 255



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 158/368 (42%), Gaps = 42/368 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC--DAAKGLLS 215
           TY  ++  LC+ G       +FD M   G  P++      ++   + G C  DA K   +
Sbjct: 152 TYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEG-CIGDAFKIFET 210

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL--YSQPDTWTFNILIQGLSR 273
               G+  +    YN+L+  L      DEA+ +F        Y +PD  TFN +IQGL +
Sbjct: 211 MLEKGK-RLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCK 269

Query: 274 IGEVKKAFEFFYDM---GSFG----CS----------------------------PDIVT 298
            G + KA E +  M   GSFG    C                             P   T
Sbjct: 270 EGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTT 329

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y+ +I G C+++ +     L   +K  S  SP +  Y ++++  CK   +++A  ++ EM
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKI-SGLSPTLFDYNTLMASLCKESSLEQARRLFQEM 388

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                +P  ++FN++IDG  K G++ SA+ +   M   G  PD  T+SS I+   + GQ+
Sbjct: 389 KESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQM 448

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            +     D M    ++P+ + +  LI      + + +    L+Q+    ++    + N +
Sbjct: 449 EEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSI 508

Query: 479 IDGFCKAG 486
           +   C + 
Sbjct: 509 LTFLCNSA 516



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 1/227 (0%)

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M    I P  V++N +I+G  K   +  A  +   M      P+  T+  L+DG C+ G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + + ++L  EMK K L  +V  ++ LI+  C +  L+  +    ++    + P   +Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+GFCK G   EA  ++  M E+  +PD  T+T +I G C  GR  +A+ +F+ M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED-QNLQLPSWKKAV 583
             P  +T N LI+ L K G   +AF+I +   E  + L++ S+   +
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLI 227



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 1/260 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N V++ LC+ G  D    ++D M   G   N       +   I++G  D A  L  + 
Sbjct: 259 TFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRV 318

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S+  Y+ +++   K +  + A  +F         P  + +N L+  L +   +
Sbjct: 319 HKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSL 378

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F +M    C PD +++N +I G  +  ++    ELL +++ +   +PD  TY+S
Sbjct: 379 EQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQ-QMGLTPDAYTYSS 437

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I+   KLG+M++A G ++ M + GI P    ++ LI GFG    +     +  +M   G
Sbjct: 438 FINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMG 497

Query: 398 YLPDVVTFSSLIDGYCRNGQ 417
            + D+   +S++   C + +
Sbjct: 498 VILDLEITNSILTFLCNSAE 517



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 3/186 (1%)

Query: 145 FSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           FSR+ +S L+ +   YN +M SLC+    +  + +F  M+     P++      +   ++
Sbjct: 350 FSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG   +AK LL+  +   +T   + Y+S +N L K    +EA   F         PD   
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           ++ LI+G     E+++       M   G   D+   N++++ LC   E     ELL    
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLP--N 527

Query: 324 FKSEFS 329
           F SE S
Sbjct: 528 FSSESS 533



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 87/179 (48%), Gaps = 1/179 (0%)

Query: 145 FSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           + RV+ L L  S  TY++++   C+M + +  + +F  M+  G  P        ++S  +
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
               + A+ L  + +       T  +N +++  +K  +   A  +  +  ++   PD +T
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYT 434

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           ++  I  LS++G++++A   F  M + G +PD   Y++LI G    +E+     LL+++
Sbjct: 435 YSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 212/409 (51%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN+V+  LC+       + +FD M      PN       +    + G+ + A  +  + 
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM 278

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V  +   +NSLLN L +    +EA  + +E       PD +T+  L  G  + G V
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNV 338

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             +     +    G      T + L++ LC+   + +  E+LK+   ++  +P  V + +
Sbjct: 339 DASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKF-LENGLAPVGVFFNT 397

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYC++G ++KA     +M + G++P+ VT+N L+  F ++ NM  AE   ++M+  G
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+V T+++LIDGY R+   ++  ++ +EM+ K L PNV ++  LIN LCK+  + +A 
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +    +VP   +YN +IDG C AG + +A     EM  +   P  VT+ ILI G 
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C KG+++EA ++ +++ R G + D IT NSLIS     G   +A  + +
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYE 626



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 207/418 (49%), Gaps = 3/418 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC   + +  Q V + M   G +P+           ++ G  DA+  L  + 
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +  +  + LLNAL K+ N ++A  + K++      P    FN ++ G  ++G++
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA+     M + G  P+ VTYN+L+   C +  +    + +K++  K    P+V TY +
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL-PNVETYNT 467

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY +    D+   I  EM   G+KP+ +++  LI+   K  N++ AE +   M+  G
Sbjct: 468 LIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRG 527

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+   ++ LIDG C  G+L    +  DEM  + + P + T+ ILIN LCK+ ++ +A 
Sbjct: 528 VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAE 587

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    L      YN +I G+  AGNV +A  +   M++   KP   T+  LI G 
Sbjct: 588 NLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG- 646

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           C K  +V    I+ +ML++   PD +  N+LI C ++ G   +A   +  A E Q +Q
Sbjct: 647 CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS-LHSAMEAQGIQ 703



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 183/386 (47%), Gaps = 4/386 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V L  NH   TYN +++  CEM   +  +     M   G LPN       +    R+   
Sbjct: 421 VGLRPNHV--TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLF 478

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    +L +     +  +   Y  L+N L K  N  EA  +  +       P+   +N+L
Sbjct: 479 DRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNML 538

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G    G++K AF FF +M +    P +VTYN LI+GLC+  +V     L  E+  K  
Sbjct: 539 IDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG- 597

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            S DV+TY S+ISGY   G + KA  +Y  M   GIKP+  T++ LI G GK G +V  E
Sbjct: 598 LSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVE 656

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + ML    +PD V +++LI  Y  +G + +   L   M+ + + P+  T+  LI   
Sbjct: 657 KIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGH 716

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            KE R++  +  +  +K   L+PK   Y+ +I G CK  + D A V   EM E    P  
Sbjct: 717 FKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSV 776

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
                LI G   +GR  +A  I ++M
Sbjct: 777 SICDNLITGLREEGRSHDADVICSEM 802



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 192/421 (45%), Gaps = 36/421 (8%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           ++  M+ DG LP+   +  F+ S +   + +    L S+     +    FMY   + A V
Sbjct: 134 LYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAV 193

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  +   A+ +     R    P  + +N++I GL +   +K A + F +M     +P+ +
Sbjct: 194 KLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRI 253

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYNTLI G C+V ++     + + +K ++   P ++T+ S+++G C+   M++A  +  E
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVEN-VEPTIITFNSLLNGLCRAQMMEEAQRVLEE 312

Query: 358 MNSCGIKPSAVTFNVLIDG-----------------------------------FGKVGN 382
           M   G  P   T+  L DG                                     K GN
Sbjct: 313 MEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGN 372

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  AE + ++ L  G  P  V F+++++GYC+ G +N+     ++M+   L PN  T+  
Sbjct: 373 MEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNS 432

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L+   C+   + +A + +K++    ++P    YN +IDG+ ++   D    I+ EME+K 
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG 492

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            KP+ +++  LI   C    ++EA  I   M+  G  P+    N LI      G   +AF
Sbjct: 493 LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAF 552

Query: 563 R 563
           R
Sbjct: 553 R 553



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 196/404 (48%), Gaps = 14/404 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T ++++ +LC+ G  +  + V      +G  P        V+   + G  + A   + + 
Sbjct: 359 TCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKM 418

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
                RP  VT     YNSL+    +  N +EA    K+       P+  T+N LI G  
Sbjct: 419 EAVGLRPNHVT-----YNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYG 473

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R     + F+   +M   G  P++++Y  LI+ LC+   +     +L ++  +    P+ 
Sbjct: 474 RSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRG-VVPNA 532

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             Y  +I G C  GK+  A   ++EM +  I P+ VT+N+LI+G  K G ++ AE +   
Sbjct: 533 QIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASE 592

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           +   G   DV+T++SLI GY   G + + L+L + MK   + P + T+  LI    KE  
Sbjct: 593 ITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGL 652

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +   + + + L+ N LVP   +YN +I  + + G+V +A  + + ME +  +PDK+T+  
Sbjct: 653 VLVEKIYQEMLQMN-LVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNC 711

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI--SCLLK 554
           LI+GH  +GRM +  ++ N M   G  P   T + LI   C LK
Sbjct: 712 LILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLK 755



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 152/316 (48%), Gaps = 2/316 (0%)

Query: 253 FRLYSQPDTWTF-NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           F L S P    F ++L+   S    V ++ E +  M   G  P + + N  +  L     
Sbjct: 103 FSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKR 162

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
                +L  E+  +S   PD   Y   I    KLG + +A  +   M   G+ P    +N
Sbjct: 163 YEDTLQLFSEI-VESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYN 221

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           V+I G  K   M  AE + + ML     P+ +T+++LIDGYC+ GQL +   + + MK +
Sbjct: 222 VVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVE 281

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
           N+ P + TF  L+N LC+   + +A+R L++++    VP  F Y  + DG  K GNVD +
Sbjct: 282 NVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDAS 341

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             +  E   K  +    T +IL+   C +G M +A  +  K L  G AP  +  N++++ 
Sbjct: 342 ITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNG 401

Query: 552 LLKGGMPNEAFRIMQR 567
             + G  N+A+  +++
Sbjct: 402 YCQVGDINKAYTTIEK 417



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 139/292 (47%), Gaps = 8/292 (2%)

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCR----VNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
            Y + S   +P    ++ ++  +C     V+E A  + L+K    K    P V +    +
Sbjct: 99  LYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMK----KDGVLPSVASLNLFL 154

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
                  + +    +++E+   G++P    +   I    K+G++  A  +   M   G  
Sbjct: 155 ESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVS 214

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P V  ++ +I G C+  ++    KL DEM  + ++PN  T+  LI+  CK  +L +A   
Sbjct: 215 PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            +++K  ++ P    +N +++G C+A  ++EA  ++ EME     PD+ T+T L  GH  
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLK 334

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G +  +I++  + +R G    D T + L++ L K G   +A  ++++  E+
Sbjct: 335 CGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLEN 386


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 199/418 (47%), Gaps = 36/418 (8%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P   F   +SS +          L  QF P  +T      + L+N    Q +   A 
Sbjct: 53  PPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAF 112

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F    +    P+  T N LI+GL   GE+KKA  F   + + G   D V+Y TLI+GL
Sbjct: 113 SVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGL 172

Query: 307 CRVNE---VAR------GHELLKEVKFKSEF-------------------------SPDV 332
           C+  E   VAR      GH +  +V   +                           SPDV
Sbjct: 173 CKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDV 232

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTYT++I G+C +G + +A  + NEM    I P+  TFN+LID   K G M  A+ +   
Sbjct: 233 VTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAV 292

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+     PDV T++SLIDGY    ++     +   M  + ++P+V  +T +IN LCK   
Sbjct: 293 MMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKM 352

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A    +++K  +++P    YN +IDG CK  +++ A  +   M+E+  +PD  ++TI
Sbjct: 353 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTI 412

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           L+ G C  GR+ +A  IF ++L  G   +      LI+ L K G  +EA  +  +  +
Sbjct: 413 LLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMED 470



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 186/380 (48%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +++ LC  G         D + + G   +       ++   + G+  A   LL + 
Sbjct: 129 TLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKL 188

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V     MYN+++N+L K     +A  ++ E       PD  T+  LI G   +G +
Sbjct: 189 EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHL 248

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+AF    +M     +P++ T+N LI  L +  ++    ++L  V  K+   PDV TY S
Sbjct: 249 KEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEA-KILLAVMMKACIKPDVFTYNS 307

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY  + ++  A  ++  M   G+ P    +  +I+G  K   +  A  + E M    
Sbjct: 308 LIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKN 367

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD+VT++SLIDG C+N  L + + LC  MK + + P+VY++TIL++ LCK  RL DA+
Sbjct: 368 MIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAK 427

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              ++L           Y  +I+  CKAG  DEA  + ++ME+K C PD VTF I+I   
Sbjct: 428 EIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRAL 487

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             K    +A  I  +M+  G
Sbjct: 488 FEKDENDKAEKILREMIARG 507



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 139/319 (43%), Gaps = 40/319 (12%)

Query: 154 HSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           HS K     YN ++ SLC+  L      V+  M   G  P+       +      G    
Sbjct: 191 HSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKE 250

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  LL++ +   +  +   +N L++AL K+    EA  +     +   +PD +T+N LI 
Sbjct: 251 AFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLID 310

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G   + EVK A   FY M   G +PD+  Y  +I+GLC+   V     L +E+K K+   
Sbjct: 311 GYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMI- 369

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD+VTY S+I G CK   +++A  +   M   GI+P   ++ +L+DG  K G +  A+ +
Sbjct: 370 PDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEI 429

Query: 390 RERMLSFGY-----------------------------------LPDVVTFSSLIDGYCR 414
            +R+L+ GY                                   +PD VTF  +I     
Sbjct: 430 FQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFE 489

Query: 415 NGQLNQGLKLCDEMKGKNL 433
             + ++  K+  EM  + L
Sbjct: 490 KDENDKAEKILREMIARGL 508



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 114/279 (40%), Gaps = 36/279 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C MG       + + M+     PN       + +  + GK   AK LL+  
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YNSL++     +    A Y+F    +    PD   +  +I GL +   V
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M      PDIVTYN+LI GLC+ + + R   L K +K +    PDV +YT 
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK-EQGIQPDVYSYTI 412

Query: 338 VISGYCKLGKMDKATGIY-----------------------------------NEMNSCG 362
           ++ G CK G+++ A  I+                                   ++M   G
Sbjct: 413 LLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKG 472

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
             P AVTF+++I    +      AE +   M++ G L +
Sbjct: 473 CMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/182 (19%), Positives = 76/182 (41%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K++ +S     +    + Y  ++  LC+  + D    +F+ M+    +P+       +  
Sbjct: 322 KYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDG 381

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             +    + A  L  + +   +    + Y  LL+ L K    ++A  +F+         +
Sbjct: 382 LCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLN 441

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
              + +LI  L + G   +A +    M   GC PD VT++ +I  L   +E  +  ++L+
Sbjct: 442 VHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILR 501

Query: 321 EV 322
           E+
Sbjct: 502 EM 503


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 211/419 (50%), Gaps = 11/419 (2%)

Query: 155 SFKTYNLVMRSLCEMGL-----HDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKC 207
           +F   NL  R     GL      D+V +  D ++S    P   +I+F    S+  +  + 
Sbjct: 48  TFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSR---PLPTVIDFNRLFSAIAKTKQY 104

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +    L  Q     +  S +  + ++N   +      A     +  +L  +PDT  FN L
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL     V +A E    M   G  P ++T NTL++GLC   +V+    L+  +  ++ 
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM-VETG 223

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F P+ VTY  V++  CK G+   A  +  +M    IK  AV ++++IDG  K G++ +A 
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M   G+  D++T+++LI G+C  G+ + G KL  +M  + +SPNV TF++LI++ 
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            KE +L +A + LK++    + P    YN +IDGFCK   ++EA  +V  M  K C PD 
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +TF ILI G+C   R+ + + +F +M   G   + +T N+L+    + G    A ++ Q
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 162/304 (53%), Gaps = 1/304 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+L+N L       +AV +         QP+  T+  ++  + + G+   A E    M  
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
                D V Y+ +I GLC+   +     L  E++ K  F  D++TY ++I G+C  G+ D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWD 315

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
               +  +M    I P+ VTF+VLID F K G +  A+ + + M+  G  P+ +T++SLI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG+C+  +L + +++ D M  K   P++ TF ILIN  CK NR++D     +++    ++
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                YN ++ GFC++G ++ A  +  EM  +R +PD V++ IL+ G C  G + +A+ I
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495

Query: 530 FNKM 533
           F K+
Sbjct: 496 FGKI 499



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 216/419 (51%), Gaps = 13/419 (3%)

Query: 159 YNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           +N ++  LC E  + +++++V D M   GH P    +   V+     GK   A  L+ + 
Sbjct: 161 FNTLLNGLCLECRVSEALELV-DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P EVT     Y  +LN + K      A+ + ++      + D   ++I+I GL 
Sbjct: 220 VETGFQPNEVT-----YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G +  AF  F +M   G   DI+TYNTLI G C       G +LL+++  K + SP+V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM-IKRKISPNV 333

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VT++ +I  + K GK+ +A  +  EM   GI P+ +T+N LIDGF K   +  A  M + 
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+S G  PD++TF+ LI+GYC+  +++ GL+L  EM  + +  N  T+  L+   C+  +
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L  A++  +++    + P    Y  ++DG C  G +++A  I  ++E+ + + D   + I
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +I G C   ++ +A  +F  +   G   D    N +IS L +    ++A  + ++ +E+
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 1/392 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N ++  LC  G      V+ D M   G  PN       ++   ++G+   A  LL + 
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    Y+ +++ L K  + D A  +F E      + D  T+N LI G    G  
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               +   DM     SP++VT++ LI    +  ++    +LLKE+  +   +P+ +TY S
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTITYNS 373

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK  ++++A  + + M S G  P  +TFN+LI+G+ K   +     +   M   G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + VT+++L+ G+C++G+L    KL  EM  + + P++ ++ IL++ LC    L  A 
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +++ + +     +Y  +I G C A  VD+A  +   +  K  K D   + I+I   
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C K  + +A  +F KM   G APD++T N LI
Sbjct: 554 CRKDSLSKADILFRKMTEEGHAPDELTYNILI 585



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/405 (22%), Positives = 197/405 (48%), Gaps = 2/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  +C+ G       +   M       ++      +    + G  D A  L ++ 
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN+L+         D+   + ++  +    P+  TF++LI    + G++
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +   +M   G +P+ +TYN+LI G C+ N +    +++ ++       PD++T+  
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNI 408

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  ++D    ++ EM+  G+  + VT+N L+ GF + G +  A+ + + M+S  
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V++  L+DG C NG+L + L++  +++   +  ++  + I+I+ +C  ++++DA 
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    +      YN +I   C+  ++ +A+++  +M E+   PD++T+ ILI  H
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
                   A  +  +M   G  P D++   ++  +L  G  +++F
Sbjct: 589 LGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGELDKSF 632



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 99/185 (53%), Gaps = 1/185 (0%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LP V+ F+ L     +  Q    L LC +M+ K ++ ++YT +I+IN  C+  +L+ A  
Sbjct: 85  LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFS 144

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            + ++      P   ++N +++G C    V EA  +V  M E   KP  +T   L+ G C
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
           + G++ +A+ + ++M+  G  P+++T   +++ + K G    A  ++ R  E++N++L +
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL-RKMEERNIKLDA 263

Query: 579 WKKAV 583
            K ++
Sbjct: 264 VKYSI 268



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 35/276 (12%)

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           S FS   ++Y   +S      K D A  ++ +M      P+ + FN L     K      
Sbjct: 47  STFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYEL 106

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
              + ++M S G    + T S +I+ +CR  +L+       ++      P+   F  L+N
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166

Query: 446 ALCKENRLNDARRFLKQL-----------------------KWNDLV------------P 470
            LC E R+++A   + ++                       K +D V            P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y PV++  CK+G    A  ++ +MEE+  K D V ++I+I G C  G +  A ++F
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           N+M   G   D IT N+LI      G  ++  ++++
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 182/334 (54%), Gaps = 1/334 (0%)

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           S+LN LV++   D     ++        PD   + +L Q   + G   K  +   +M S 
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  P++  Y   I  LCR N++    ++ + +K K    P++ TY+++I GYCK G + +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK-KHGVLPNLYTYSAMIDGYCKTGNVRQ 287

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A G+Y E+    + P+ V F  L+DGF K   +V+A  +   M+ FG  P++  ++ LI 
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G+C++G + + + L  EM+  NLSP+V+T+TILIN LC E+++ +A R  +++K   + P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               YN +I G+CK  N+++A  + +EM     +P+ +TF+ LI G+C    +  A+ ++
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +M   G  PD +T  +LI    K     EA R+
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 197/392 (50%), Gaps = 2/392 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y + +  LC     +  + +F+ M+  G LPN       +    + G    A GL  +  
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             E+  +  ++ +L++   K      A  +F    +    P+ + +N LI G  + G + 
Sbjct: 297 VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML 356

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A     +M S   SPD+ TY  LI+GLC  ++VA  + L +++K +  F P   TY S+
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF-PSSATYNSL 415

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYCK   M++A  + +EM + G++P+ +TF+ LIDG+  V ++ +A  +   M   G 
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +PDVVT+++LID + +   + + L+L  +M    + PN +TF  L++   KE RL+ A  
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           F ++            +  +I+G C+ G +  A+   ++M      PD  ++  ++ GH 
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            + R+ + + +   M++ G  P ++ VN L++
Sbjct: 596 QEKRITDTMMLQCDMIKTGILP-NLLVNQLLA 626



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 210/440 (47%), Gaps = 9/440 (2%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           LS LN L   +R D+  +  + +    ++  L      Y ++ +   + GL+   + + D
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLM----ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD 223

Query: 181 YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
            M S G  PN  +   ++    R  K + A+ +    +   V  + + Y+++++   K  
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           N  +A  ++KE       P+   F  L+ G  +  E+  A   F  M  FG  P++  YN
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI G C+   +     LL E++     SPDV TYT +I+G C   ++ +A  ++ +M +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEME-SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             I PS+ T+N LI G+ K  NM  A  +   M + G  P+++TFS+LIDGYC    +  
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            + L  EM  K + P+V T+T LI+A  KE  + +A R    +    + P    +  ++D
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           GF K G +  A     E  ++R   + V FT LI G C  G ++ A   F+ M   G  P
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582

Query: 541 DDITVNSLISCLLKGGMPNE 560
           D   + S +S +LKG +  +
Sbjct: 583 D---ICSYVS-MLKGHLQEK 598



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 161/374 (43%), Gaps = 63/374 (16%)

Query: 235 ALVKQNNADEAVYMFK----------------------------------------EYFR 254
           A++K  +A+EA  +F+                                        E  +
Sbjct: 47  AILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLK 106

Query: 255 LYSQPDTWT---FNIL--IQGLS-RIGEVKKAFEFFYDMGSF----------GCSPDIVT 298
            +S+P   +   FN L  IQ     IG        F +MG F           CSPD   
Sbjct: 107 RHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKA 166

Query: 299 YNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
             ++++GL    R + V   ++L+          PDV  Y  +     K G   K   + 
Sbjct: 167 CLSILNGLVRRRRFDSVWVDYQLM----ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLL 222

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +EM S GIKP+   + + I    +   M  AE M E M   G LP++ T+S++IDGYC+ 
Sbjct: 223 DEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKT 282

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G + Q   L  E+    L PNV  F  L++  CK   L  AR     +    + P  ++Y
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I G CK+GN+ EA  +++EME     PD  T+TILI G C++ ++ EA  +F KM  
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402

Query: 536 IGCAPDDITVNSLI 549
               P   T NSLI
Sbjct: 403 ERIFPSSATYNSLI 416



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/321 (20%), Positives = 128/321 (39%), Gaps = 34/321 (10%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   ++ +   YN ++   C+ G       +   M S    P+       ++      + 
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  L  + +   +  S+  YNSL++   K+ N ++A+ +  E      +P+  TF+ L
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---------------------- 305
           I G   + ++K A   +++M   G  PD+VTY  LI                        
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510

Query: 306 -------LCRVNEVARGHELLKEVKFKSEFSP-----DVVTYTSVISGYCKLGKMDKATG 353
                   C V+   +   L   + F  E +      + V +T +I G C+ G + +A+ 
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
            +++M SCGI P   ++  ++ G  +   +     ++  M+  G LP+++    L   Y 
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQ 630

Query: 414 RNGQLNQGLKLCDEMKGKNLS 434
            NG +     L +  + K +S
Sbjct: 631 ANGYVKSACFLTNSSRLKTVS 651


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 225/468 (48%), Gaps = 11/468 (2%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFS-RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
           ++L P   + +I   +N  L  +  +++ + +   +H++ TY+ ++  L      D V+ 
Sbjct: 11  QRLYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVES 70

Query: 178 VFDYM-RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR--PGEVTM--STFMYNSL 232
           +   + R+  H+      + F+S     G     +  L  F     E +M  S  + N+L
Sbjct: 71  LLSQLSRNSSHIKCGD--DVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTL 128

Query: 233 LNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           LN  V+           K     Y   P+ ++FNILI+ L +  +V+ A + F +M + G
Sbjct: 129 LNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMG 188

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P++VTY T++ G     ++    ++  E+  K  + PD  TYT ++ GYCK G++  A
Sbjct: 189 MIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKG-WLPDATTYTVLMVGYCKQGRLSDA 247

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             + + M   G++P+ VT+ V+ID + K      A  + + ML   +LP       +ID 
Sbjct: 248 IKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDV 307

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C +G++     L   M  KN  P+    + LI+ LCKE ++ +AR+   + +    +P 
Sbjct: 308 LCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFE-QGTIPS 366

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I G C+ G ++EA  +  +M EKRC+P+  T+ +LI G    G + E + I  
Sbjct: 367 LMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILE 426

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           +ML  GC P+  T   LI  L + GM  +  ++M  A   + +   SW
Sbjct: 427 EMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMASREVDADSW 474


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 203/409 (49%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           + N+++  LC+    +    +F+     G  PNS      +    + GK D A  L  + 
Sbjct: 422 SVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +Y SL+         ++   ++KE  R   +PD    N  +  + + GEV
Sbjct: 482 LDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEV 541

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K    F DM SFG  PD+ +Y+ LI GL +  + AR    + +   +  F+ D   Y +
Sbjct: 542 EKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ-ARETSNIFQAMSQQGFALDARAYNA 600

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G CK GK+DKA  +  EM    + P+  T+  ++DG  K+  +  A  + E   S G
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +V+ +SSLIDG+ + G++++   + +EM  K L+PNVYT+  L++AL K   +++A 
Sbjct: 661 IELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +K     P  + Y+ +I+G C+    ++A V   EM+++   P+ VT+T +I G 
Sbjct: 721 ICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGL 780

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              G + +A S+F +    G  PD  + N+LI  +     P EA+++ +
Sbjct: 781 AKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFE 829



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 199/398 (50%), Gaps = 3/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG-KCDAAKGLLSQ 216
           TY  ++  L + G  D    +F+ M   GH  N  +    + +    G K D  K     
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEM 516

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G     T + N+ ++ + K    ++   +F++       PD  +++ILI GL++ G+
Sbjct: 517 IRRGGRPDLTLL-NTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            ++    F  M   G + D   YN ++ GLC+  +V + +E+L+E+K K    P V TY 
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK-HVHPTVATYG 634

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++ G  K+ ++D+A  ++ E  S GI+ + + ++ LIDGFGKVG +  A  + E M+  
Sbjct: 635 SIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKK 694

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+V T++SL+D   +  ++++ L     MK    SPN YT++ILIN LC+  + N A
Sbjct: 695 GLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKA 754

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             F ++++   L+P    Y  +I G  K GN+ +A  +    +     PD  +F  LI G
Sbjct: 755 FVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEG 814

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
                R +EA  +F +    GC  +  T  SL+  L K
Sbjct: 815 MSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNK 852



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 210/441 (47%), Gaps = 10/441 (2%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHD--SVQVVFDYMRSDG 186
           V++ L NP L   F   +  + S       YN V+  L     HD  +++ V + M   G
Sbjct: 81  VLRSLKNPSLAAPFFLLASASSSQPLPPDAYNAVLPFLS----HDLAALEKVLEEMSHLG 136

Query: 187 H-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           + LPN P     V++ +R+ + + A  ++   R  +       Y  L+ AL +    + A
Sbjct: 137 YGLPN-PACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERA 195

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           + + ++   +  +     F  L++ L+R G+++ A     ++      PDIV YN  I  
Sbjct: 196 LELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDC 255

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             +   V    +   E+K      PD V+YTS++   CK G++ +A  ++ +M +    P
Sbjct: 256 FGKAGSVDMAWKFFHELKAHG-LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVP 314

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
            A  +N +I G+G       A  + ER+   G +P VV+F+S++    +  ++++ L L 
Sbjct: 315 CAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF 374

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D MK K+  PN+ T+ I+I+ LC   R+N+A +   +++   L P     N ++D  CKA
Sbjct: 375 DVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKA 433

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
             ++EA+ I     E+ C P+ VT+  LI G   KG++ +A  +F KML  G   + I  
Sbjct: 434 NQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIY 493

Query: 546 NSLISCLLKGGMPNEAFRIMQ 566
            SLI      G   +  +I +
Sbjct: 494 TSLIRNFFMHGRKEDGHKIYK 514



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 195/410 (47%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  +    + D M   G  PN   +   V    +A + + A  +    
Sbjct: 387 TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA 446

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ++  Y SL++ L K+   D+A  +F++        +   +  LI+     G  
Sbjct: 447 SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRK 506

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   + + +M   G  PD+   NT +  + +  EV +G  + +++K    F PDV +Y+ 
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK-SFGFLPDVRSYSI 565

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K G+  + + I+  M+  G    A  +N ++DG  K G +  A  + E M    
Sbjct: 566 LIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V T+ S++DG  +  +L++   L +E K K +  NV  ++ LI+   K  R+++A 
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAY 685

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    L P  + +N ++D   K   +DEA +    M+E +C P+  T++ILI G 
Sbjct: 686 LILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGL 745

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   +  +A   + +M + G  P+ +T  ++IS L K G   +A+ + +R
Sbjct: 746 CRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER 795



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 203/448 (45%), Gaps = 37/448 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G     + +F  M ++  +P +      +     A + D A  LL + 
Sbjct: 283 SYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERL 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R      S   +NS+L  L K+   DEA+ +F +  +  ++P+  T+NI+I  L   G V
Sbjct: 343 RERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRV 401

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++   +M   G  P++++ N ++  LC+ N++   H + +    +   +P+ VTY S
Sbjct: 402 NEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG-CNPNSVTYCS 460

Query: 338 VISGYCKLGKMDKA-----------------------------------TGIYNEMNSCG 362
           +I G  K GK+D A                                     IY EM   G
Sbjct: 461 LIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRG 520

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +P     N  +D   K G +     + E M SFG+LPDV ++S LI G  + GQ  +  
Sbjct: 521 GRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETS 580

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            +   M  +  + +   +  +++ LCK  +++ A   L+++K   + P    Y  ++DG 
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGL 640

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K   +DEA ++  E + K  + + + ++ LI G    GR+ EA  I  +M++ G  P+ 
Sbjct: 641 AKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
            T NSL+  L+K    +EA    Q   E
Sbjct: 701 YTWNSLMDALVKTEEIDEALICFQSMKE 728



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 190/427 (44%), Gaps = 12/427 (2%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           +L     F  Y +++ +L E    +    +   M+  G+  + P+    V +  R G+ +
Sbjct: 169 HLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQME 228

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ + +   +     +YN  ++   K  + D A   F E      +PD  ++  ++
Sbjct: 229 PALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMV 288

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             L + G + +A E F  M +    P    YNT+I G          ++LL+ ++ +   
Sbjct: 289 WVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCI 348

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P VV++ S+++   K  K+D+A  +++ M     KP+  T+N++ID     G +  A  
Sbjct: 349 -PSVVSFNSILTCLGKKRKVDEALTLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYK 406

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +R+ M   G  P++++ + ++D  C+  QL +  ++ +    +  +PN  T+  LI+ L 
Sbjct: 407 IRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLG 466

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ +++DA R  +++        P +Y  +I  F   G  ++ + I  EM  +  +PD  
Sbjct: 467 KKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLT 526

Query: 509 TFT-----ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
                   +   G   KGR     +IF  M   G  PD  + + LI  L K G   E   
Sbjct: 527 LLNTYMDCVFKAGEVEKGR-----AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSN 581

Query: 564 IMQRASE 570
           I Q  S+
Sbjct: 582 IFQAMSQ 588



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 151/300 (50%), Gaps = 1/300 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++Y++++  L + G       +F  M   G   ++      V    ++GK D A  +L +
Sbjct: 561 RSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEE 620

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   V  +   Y S+++ L K +  DEA  +F+E      + +   ++ LI G  ++G 
Sbjct: 621 MKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGR 680

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A+    +M   G +P++ T+N+L+  L +  E+       + +K + + SP+  TY+
Sbjct: 681 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMK-EMKCSPNTYTYS 739

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G C++ K +KA   + EM   G+ P+ VT+  +I G  KVGN+  A  + ER  + 
Sbjct: 740 ILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTN 799

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD  +F++LI+G     +  +  ++ +E + +    NV T   L++AL K   L  A
Sbjct: 800 GGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 112/244 (45%)

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++++   +  +++ A  +   M     +P    + VLI    +      A  +  +M  
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQD 204

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            GY   V  F++L+    R GQ+   L L DE+KG  L P++  + + I+   K   ++ 
Sbjct: 205 VGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDM 264

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +F  +LK + L P    Y  ++   CKAG + EA  +  +ME +R  P    +  +I+
Sbjct: 265 AWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIM 324

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           G+    R  +A  +  ++   GC P  ++ NS+++CL K    +EA  +     +D    
Sbjct: 325 GYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPN 384

Query: 576 LPSW 579
           + ++
Sbjct: 385 ISTY 388



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 91/197 (46%), Gaps = 8/197 (4%)

Query: 382 NMVSAEYMRERMLSFGY-LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           ++ + E + E M   GY LP+    ++L+    R+ +L    ++   M+     P    +
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPAC-AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAY 179

Query: 441 TILINALCKENRLNDARRFLKQLK---WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           T+LI AL +  +   A   L+Q++   +   VP   ++  ++    + G ++ A  +V E
Sbjct: 180 TVLIGALAEARQPERALELLRQMQDVGYEVSVP---LFTTLVRALAREGQMEPALALVDE 236

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           ++    +PD V + + I      G +  A   F+++   G  PDD++  S++  L K G 
Sbjct: 237 VKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGR 296

Query: 558 PNEAFRIMQRASEDQNL 574
             EA  +  +   ++++
Sbjct: 297 LGEAEELFGQMEAERDV 313


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 4/346 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ST   N+LL  LV     D A   F+   R    PD +TFN +I GL RIG+++KA +  
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE---LLKEVKFKSEFSPDVVTYTSVISG 341
            D+ ++G +P + TYN+LI G C+       +    LLKE+  ++  SP  VT+  +I+G
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAVTFGVLING 273

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YCK      A  ++ EM   GI  S VT+N LI G    G +     + E M   G  P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            +TF  ++ G+C+ G +       D M  +N+ P+V  + ILI+   +  ++ DA    +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +    + P    YN +I GF ++G+   A+ ++ EM+EK  + D VT+ +LI   C KG
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            + +A+ + ++M  +G  P+ +T N++I      G    A+ I  R
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 192/388 (49%), Gaps = 8/388 (2%)

Query: 191 SPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           SP I  F   +S   R G+   A  +    +   +  S   YNSL++   K+  A    +
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 248 ---MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
              + KE       P   TF +LI G  +      A   F +M   G +  +VTYN+LIS
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC   +V  G +L++E++     SP+ +T+  V+ G+CK G M  A    + M    ++
Sbjct: 308 GLCSEGKVEEGVKLMEEME-DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  V +N+LID + ++G M  A  ++E M   G  P+V T++ LI G+ R+G       L
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEMK K +  +V T+ +LI ALC +  +  A + L ++    L P    YN +I GFC 
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            GN+  A  I   ME+ R + + VT+ + I   C  G+M EA  + N+ML     P+ IT
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546

Query: 545 VNSLISCLL-KGGMPNEAFRIMQRASED 571
             ++   ++ KG  P+     + +ASE+
Sbjct: 547 YETIKEGMMEKGYTPDIRGCTVSQASEN 574



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 4/338 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDS---VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           L  S  TYN ++   C+ G   +   V ++   M   G  P +      ++   +     
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           AA  +  + +   +  S   YNSL++ L  +   +E V + +E   L   P+  TF  ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +G  + G +  A ++   M      PD+V YN LI    R+ ++      +KE   K   
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA-VKEAMAKKGI 400

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP+V TY  +I+G+ + G    A+G+ +EM   GI+   VT+NVLI      G +  A  
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G  P+ +T++++I G+C  G +    ++   M+      NV T+ + I   C
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFC 520

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +  ++++A   L ++    LVP    Y  + +G  + G
Sbjct: 521 QIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 4/271 (1%)

Query: 300 NTLISGLCRVNEVARGHE-LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           + L+  L R ++  R ++  L   +      P   +  ++++G     ++D A   +   
Sbjct: 123 DMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSA 182

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
               + P   TFN +I G  ++G +  A  + + + ++G  P V T++SLIDGYC+ G  
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 419 NQGLK---LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
                   L  EM    +SP   TF +LIN  CK +    A R  +++K   +      Y
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I G C  G V+E   ++ EME+    P+++TF  ++ G C KG M +A    + M  
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               PD +  N LI    + G   +A  + +
Sbjct: 363 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           G+K +E    +L L+ +  T+  V++  C+ G+        D M      P+  +    +
Sbjct: 318 GVKLME-EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILI 376

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               R GK + A  +        ++ +   YN L+    +  +   A  +  E      +
Sbjct: 377 DVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIE 436

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            D  T+N+LI  L   GEV+KA +   +M   G  P+ +TYNT+I G C    +   +E+
Sbjct: 437 ADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEI 496

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
              ++ K     +VVTY   I  +C++GKMD+A  + NEM    + P+ +T+        
Sbjct: 497 RTRME-KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITY-------- 547

Query: 379 KVGNMVSAEYMRERMLSFGYLPDV 402
                   E ++E M+  GY PD+
Sbjct: 548 --------ETIKEGMMEKGYTPDI 563


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 194/395 (49%), Gaps = 1/395 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + + YN+++  L    + D ++ V+  M  D   PN   +   V+   + G    A+  +
Sbjct: 168 TLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYV 227

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +++ TF Y SL+    +  N D A  +F          +  ++  LI G    
Sbjct: 228 SKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEA 287

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             V +A + F  M    C P + TY  +I  LC++        + KE+  K    P+V T
Sbjct: 288 RRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEK-HCQPNVHT 346

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT +I   C+    D A  I N M   G+ PS VT+N LIDG+ K G   SA  +   M 
Sbjct: 347 YTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLME 406

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S    P+  T++ LI G+CR   +++ + L  +M  + L PNV T+ ILI+  CKE  L 
Sbjct: 407 SNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLG 466

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + L  +  + LVP  + Y+  ID  CK G V+EA  +   ++EK  K ++V ++ LI
Sbjct: 467 SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLI 526

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            G+C  G++ +   + +KML  GC P+ IT NSLI
Sbjct: 527 DGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLI 561



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 193/398 (48%), Gaps = 1/398 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TY +++ +LC++G       +F  M      PN       + S       D AK +L
Sbjct: 308 TVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKIL 367

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +      +  S   YN+L++   K+  +  A+ +          P+  T+N LI G  R 
Sbjct: 368 NGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRG 427

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             + KA    + M      P++VTYN LI G C+  ++   ++LL  +  +S   PD  T
Sbjct: 428 KNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMN-ESGLVPDEWT 486

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+  I   CK G +++A  ++  +   GIK + V ++ LIDG+ KVG +    ++ ++ML
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKML 546

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G +P+ +T++SLIDGYC+     +   L D M  +++ P   T+TILI+ L K++  +
Sbjct: 547 SAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFD 606

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A     Q+      P  F+Y   I  +C  G + +A V++ +M  K   PD + +T+ I
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             +   G +  A  I  +M  +GC P   T + LI  L
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 186/404 (46%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C     D+   +F  M + G L N       +     A + D A  L SQ 
Sbjct: 241 TYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM 300

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y  ++ AL +     EA+ MFKE    + QP+  T+ +LI  L      
Sbjct: 301 HEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNF 360

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   G  P +VTYN LI G C+    A   E+L  ++  +  SP+  TY  
Sbjct: 361 DDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLME-SNNCSPNARTYNE 419

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+   + KA  + ++M    ++P+ VT+N+LI G  K G++ SA  +   M   G
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD  T+S  ID  C+ G + +   L + +K K +  N   ++ LI+  CK  +++D R
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++     VP    YN +IDG+CK  N  EA ++V  M ++  +P   T+TILI   
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                  +A  +F++ML  G  PD     + I      G   +A
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDA 643



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 182/413 (44%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++   CE    D    +F  M  D   P        + +  + G+   A  +  + 
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEM 335

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y  L+ +L + +N D+A  +          P   T+N LI G  + G  
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLS 395

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    M S  CSP+  TYN LI G CR   + +   LL ++  + +  P+VVTY  
Sbjct: 396 ASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM-LERKLQPNVVTYNI 454

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G +  A  + + MN  G+ P   T++V ID   K G +  A  + E +   G
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + V +S+LIDGYC+ G+++ G  L D+M      PN  T+  LI+  CKE    +AR
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  +   D+ P    Y  +ID   K    D+A+ +  +M      PD   +T  I  +
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C  GR+ +A  +  KM   G  PD +     I    + G  + AF I++R  E
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 168/324 (51%), Gaps = 2/324 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N+L+  LSR   + +    + +M     +P+I T NT+++G C++  V    EL     
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA-ELYVSKI 230

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            ++  S D  TYTS+I GYC+   +D A  I+  M + G   + V++  LI GF +   +
Sbjct: 231 VQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRV 290

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +  +M      P V T++ +I   C+ G+  + L +  EM  K+  PNV+T+T+L
Sbjct: 291 DEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVL 350

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I +LC+++  +DA++ L  +    L+P    YN +IDG+CK G    A  I++ ME   C
Sbjct: 351 ICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNC 410

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P+  T+  LI+G C    + +A+S+ +KML     P+ +T N LI    K G    A++
Sbjct: 411 SPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYK 470

Query: 564 IMQRASEDQNLQLPSWKKAVPLRT 587
           ++   +E   L    W  +V + T
Sbjct: 471 LLSLMNE-SGLVPDEWTYSVFIDT 493



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 198/449 (44%), Gaps = 30/449 (6%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++   C+ GL  S   +   M S+   PN+      +    R      A  LL
Sbjct: 378 SVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLL 437

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    ++  +   YN L++   K+ +   A  +          PD WT+++ I  L + 
Sbjct: 438 HKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKR 497

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A   F  +   G   + V Y+TLI G C+V +V+ G  LL ++   +   P+ +T
Sbjct: 498 GLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM-LSAGCVPNSIT 556

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y S+I GYCK     +A  + + M    I+P+A T+ +LID   K      A  M ++ML
Sbjct: 557 YNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQML 616

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G  PDV  +++ I  YC +G+L     L  +M  K + P+   +T+ I+A  +   ++
Sbjct: 617 STGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSID 676

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKA------------------GNVDEANV--- 493
            A   LK++      P  + Y+ +I     A                   + D +N    
Sbjct: 677 GAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRR 736

Query: 494 --------IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
                   +  +M E  C P+  T+   I G C  G +  A  +F+ M   G +P++   
Sbjct: 737 VDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIY 796

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           NSL+ C  + G+  EA R +    E+++L
Sbjct: 797 NSLLGCSCQLGLYGEAIRWLDIMIENRHL 825



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 170/421 (40%), Gaps = 30/421 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++ + +LC+ GL +  + +F+ ++  G   N  +    +    + GK    + LL + 
Sbjct: 486 TYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM 545

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ++  YNSL++   K+ N  EA  +     +   +P   T+ ILI  L +  E 
Sbjct: 546 LSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEF 605

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M S G  PD+  Y   I   C    +     L+ ++  K    PD + YT 
Sbjct: 606 DQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG-IMPDTMLYTL 664

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI----------------------- 374
            I  Y + G +D A GI   M+  G +PS  T++ LI                       
Sbjct: 665 FIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSG 724

Query: 375 ---DGFGKVGNMVSAEYMRE---RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
              + F      V  E+  +   +M   G  P+  T+   I G C+ G L    +L D M
Sbjct: 725 VASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM 784

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           K K  SPN   +  L+   C+     +A R+L  +  N  +P       ++ G    GN 
Sbjct: 785 KEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGND 844

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           ++A  +     +     D++ + +LI G   KG   +   +F  M   GC     T + L
Sbjct: 845 EKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSML 904

Query: 549 I 549
           I
Sbjct: 905 I 905



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 61/155 (39%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY   +  LC++G  +    +FD+M+  G  PN  +    +    + G    A   L   
Sbjct: 760 TYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIM 819

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                         LL  L  + N ++A  +F  + +     D   + +LI GL + G  
Sbjct: 820 IENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLS 879

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            K  + F  M + GC     TY+ LI G   + E+
Sbjct: 880 DKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEI 914


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 217/420 (51%), Gaps = 7/420 (1%)

Query: 139 GLKFLEF---SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           GL+F ++   S +N++++ +  ++NLV+++LC++G  D    VF  M     LP+     
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYC 226

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +    +  + D A  LL + +    + S  +YN L++ L K+ +      +    F  
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLK 286

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P+  T+N LI GL   G++ KA      M S  C P+ VTY TLI+GL +      G
Sbjct: 287 GCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDG 346

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             LL  ++ +  +  +   Y+ +ISG  K GK ++A  ++ +M   G +P+ V ++ +ID
Sbjct: 347 ARLLISMEERG-YRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVID 405

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G  + G    A+ +   M+S G LP+V T+SSL+ G+ + G   + +++  EM     S 
Sbjct: 406 GLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSR 465

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           N + +++LI+ LC   R+ +A     ++    + P    Y+ +I G C  G++D A  + 
Sbjct: 466 NEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLY 525

Query: 496 AEM---EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            EM   EE + +PD VT+ IL+ G CM+  +  A+ + N ML  GC PD IT N+ ++ L
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTL 585



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 177/336 (52%), Gaps = 1/336 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N ++ AL K    D A+ +F+        PD +T+  L+ GL +   + +A     +M 
Sbjct: 190 FNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           S GCSP  V YN LI GLC+  +++R  +L+  +  K  F P+ VTY ++I G C  GK+
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCF-PNEVTYNTLIHGLCLKGKL 308

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           DKA  +   M S    P+ VT+  LI+G  K    +    +   M   GY  +   +S L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVL 368

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G  + G+  + + L  +M  K   PN+  ++ +I+ LC+E + N+A+  L  +  +  
Sbjct: 369 ISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGC 428

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P  + Y+ ++ GF K G  +EA  +  EM+E  C  ++  +++LI G C  GR+ EA+ 
Sbjct: 429 LPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMM 488

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +++KML IG  PD +  +S+I  L   G  + A ++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKL 524



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 191/385 (49%), Gaps = 10/385 (2%)

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           S MIE + +     G   + + LLS+ R     +    +  +  A  K +  ++AV +F 
Sbjct: 81  SSMIENYAN----LGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFH 136

Query: 251 EYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFF-YDMGS---FGCSPDIVTYNTLISG 305
                +  +    +FN ++  +   G   +  EF+ Y + S      SP+ +++N +I  
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKA 196

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           LC++  V R  E+ + +  K    PD  TY +++ G CK  ++D+A  + +EM S G  P
Sbjct: 197 LCKLGFVDRAIEVFRGMPEKKCL-PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           S V +NVLIDG  K G++     + + M   G  P+ VT+++LI G C  G+L++ + L 
Sbjct: 256 SPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLL 315

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           + M      PN  T+  LIN L K+ R  D  R L  ++         +Y+ +I G  K 
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKE 375

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G  +EA  +  +M EK C+P+ V ++ +I G C +G+  EA  I N M+  GC P+  T 
Sbjct: 376 GKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTY 435

Query: 546 NSLISCLLKGGMPNEAFRIMQRASE 570
           +SL+    K G+  EA ++ +   E
Sbjct: 436 SSLMKGFFKTGLSEEAIQVWREMDE 460



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 172/409 (42%), Gaps = 55/409 (13%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++  LC+ G    V  + D M   G  PN       +      GK D A  LL +  
Sbjct: 260 YNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +   +   Y +L+N LVKQ  A +   +         + +   +++LI GL + G+ +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAE 379

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A   +  M   GC P+IV Y+ +I GLCR  +     E+L  +   S   P+V TY+S+
Sbjct: 380 EAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGM-ISSGCLPNVYTYSSL 438

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G+ K G  ++A  ++ EM+  G   +   ++VLIDG   VG +  A  +  +ML+ G 
Sbjct: 439 MKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498

Query: 399 --------------------------------------LPDVVTFSSLIDGYCRNGQLNQ 420
                                                  PDVVT++ L+DG C    +++
Sbjct: 499 KPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSR 558

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALC-KENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            + L + M  +   P+V T    +N L  K +   + R FL++L          +    +
Sbjct: 559 AVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVAR------LLKRQRV 612

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            G CK         IV  M  K   P   T+ +++   C   ++  AI+
Sbjct: 613 SGACK---------IVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAIN 652


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 195/410 (47%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +  N V+     +G  D  + VFD M     +P+S   +  V    R G+       L  
Sbjct: 194 RILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKD 253

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                  +       +++   ++   + A + FK++ ++   P+   F+ LI GL +IG 
Sbjct: 254 MIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGS 313

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K+AFE   +M   G  P++ T+  LI GLC+     +   L  ++     + P+V TYT
Sbjct: 314 IKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYT 373

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+GYCK  K+++A  +   M   G+ P+  T+  LIDG  K GN   A  + + M   
Sbjct: 374 CMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKE 433

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+ P++ T++++IDG C+ G+  +  KL        L  +  T+TILI+  C++     A
Sbjct: 434 GFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQA 493

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                ++    L P    YN +I  FC+   V+E+  +  E       P K T+T +I G
Sbjct: 494 LAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICG 553

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +C  G +  AI  F+KM   GC PD IT  +LIS L      +EA ++ +
Sbjct: 554 YCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYE 603



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 196/411 (47%), Gaps = 2/411 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y L++   C MG    V      M   G+  ++      +S+    G  + A     ++
Sbjct: 230 SYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKW 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   ++SL+N L K  +  +A  M +E  R   +P+ +T   LI GL + G  
Sbjct: 290 VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWT 349

Query: 278 KKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +KAF  F  +  S    P++ TY  +I+G C+  ++ R   LL  +K +    P+  TYT
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMK-EQGLVPNTNTYT 408

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G+CK G   +A  + + M   G  P+  T+N +IDG  K G    A  +  R L  
Sbjct: 409 CLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKS 468

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   D VT++ LI  +CR     Q L +   M    L P+++T+ +LI   C++ ++ ++
Sbjct: 469 GLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEES 528

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  ++     L+P    Y  +I G+C+ G++  A     +M +  CKPD +T+  LI G
Sbjct: 529 EKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISG 588

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C + ++ EA  ++  M+  G +P ++T  +L     K G    A  I++R
Sbjct: 589 LCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILER 639



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 186/389 (47%), Gaps = 2/389 (0%)

Query: 181 YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
           ++ +D     + +++  V S    GK   A  ++ + +   + +   + N +++  +   
Sbjct: 148 FLNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALG 207

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
             D A  +F E       PD+ ++ +++ G  R+G +     +  DM   G + D  T  
Sbjct: 208 FVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCT 267

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            +IS       V R     K+   +   +P+++ ++S+I+G CK+G + +A  +  EM  
Sbjct: 268 LMISTFSEKGFVNRAFWYFKKW-VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVR 326

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLN 419
            G KP+  T   LIDG  K G    A  +  +++ S  Y P+V T++ +I+GYC+  +LN
Sbjct: 327 KGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLN 386

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L   MK + L PN  T+T LI+  CK      A   +  +      P  F YN +I
Sbjct: 387 RAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAII 446

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG CK G   EA  ++    +     DKVT+TILI   C +    +A++IF++M ++G  
Sbjct: 447 DGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQ 506

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           PD  T N LI+   +     E+ ++ + A
Sbjct: 507 PDMHTYNVLIATFCRQKKVEESEKLFEEA 535



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 191/407 (46%), Gaps = 11/407 (2%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V + LN +   ++ ++  LC++G       + + M   G  PN       +    + G  
Sbjct: 290 VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWT 349

Query: 208 DAA-KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWT 263
           + A +  L   R      + + Y  ++N   K+   + A  +     R+  Q   P+T T
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLL---IRMKEQGLVPNTNT 406

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  LI G  + G   +A+E    MG  G +P+I TYN +I GLC+       ++LL+   
Sbjct: 407 YTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRR-G 465

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            KS    D VTYT +IS +C+     +A  I++ M   G++P   T+NVLI  F +   +
Sbjct: 466 LKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKV 525

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             +E + E  +  G LP   T++S+I GYCR+G ++  +K   +M+     P+  T+  L
Sbjct: 526 EESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGAL 585

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LC E++L++A +  + +  N L P       +   +CK G+   A +I+  +E+K  
Sbjct: 586 ISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLW 645

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
                T   LI   C + ++  A   F+K+L      D IT+ +  +
Sbjct: 646 IR---TVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTT 689



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 96/218 (44%)

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           +N+  +  +      ++  F ++G +  A  M   M + G +      + +ID     G 
Sbjct: 149 LNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGF 208

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++   K+ DEM  + + P+  ++ +++   C+  R++D  R+LK +              
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I  F + G V+ A     +  +    P+ + F+ LI G C  G + +A  +  +M+R G
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
             P+  T  +LI  L K G   +AFR+  +     N +
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYK 366


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 201/418 (48%), Gaps = 11/418 (2%)

Query: 125 NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
           + + V++ + +PKL  +  +++       H+  TYN  + +L + G     + +FD M  
Sbjct: 6   DVIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLY 65

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
              LPN       +       K DAA  LL       +T +TF+ N L++ L K    D 
Sbjct: 66  KECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDA 125

Query: 245 AVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           A  ++K   RL  +   D  ++N+L  GL +  ++ +A   F +M      P ++TYN L
Sbjct: 126 AYELYK---RLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGL 182

Query: 303 ISGLCRVNEVARGHELLKEV---KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + G CR   + +   LL+E+   K  S+  PD+ +Y +VISG+CK  ++  A  +   M 
Sbjct: 183 LYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMI 242

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  P+ VTFN L+DG    G +  A  M E M+     P  VT++ LI G+ R  +++
Sbjct: 243 KSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRID 302

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +      +M  + + PNVYT+T LI  LC  N++ DA   LK++      P    Y  VI
Sbjct: 303 KANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVI 362

Query: 480 DGFCKAGNVDEANVIVAEMEEKR---CKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
              CK G ++ A  +  +    R   CKPD   ++ +I   C + + +EA   F +M+
Sbjct: 363 GALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMV 420



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 41/356 (11%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R  +   + F YN+ LNALVK  +  +A  +F +       P+ +T+ I+++GL    + 
Sbjct: 29  RQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E   DM S   +P     N L+S LC+  +V   +EL K  +   E S D ++Y  
Sbjct: 89  DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYK--RLSDECSLDRISYNM 146

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +  G CK  ++D+A  ++ EM    + PS +T+N                          
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEENAVVPSLLTYN-------------------------- 180

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM----KGKNLSPNVYTFTILINALCKENRL 453
                     L+ GYCR G++ Q + L +EM    KG ++ P++Y++  +I+  CK  +L
Sbjct: 181 ---------GLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQL 231

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             AR  L+++  +   P    +N ++DG C  G +DEAN +   M E+ C+P  VT+T+L
Sbjct: 232 PTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVL 291

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           I GH    R+ +A   F  MLR G  P+  T  +LI  L       +A  I++R S
Sbjct: 292 ITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMS 347



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 44/367 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +V+R LC+    D+   +   M S    P + ++   VS   + GK DAA  L  + 
Sbjct: 74  TYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL 133

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E ++    YN L   L K +  D A+ +F E       P   T+N L+ G  R G +
Sbjct: 134 -SDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRM 192

Query: 278 KKAFEFFYDM--GSFGCS--PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           ++A     +M  G  G    PD+ +YNT+ISG C+  ++     +L+ +  KS  SP+VV
Sbjct: 193 EQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRM-IKSGCSPNVV 251

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK-------------- 379
           T+ +++ G C  GK+D+A  ++  M     +P+AVT+ VLI G  +              
Sbjct: 252 TFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDM 311

Query: 380 ---------------VGNMVSAEYMRE------RMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                          +G +  A  + +      RM S G  P+VVT++ +I   C+ GQ+
Sbjct: 312 LRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQI 371

Query: 419 NQGLKLCDEMKGKNLS---PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            +  KL ++  G   +   P+ Y ++ +I  LC++++  +A  +  ++  + LV KP +Y
Sbjct: 372 ERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIY 431

Query: 476 NPVIDGF 482
             + DG 
Sbjct: 432 KAMADGL 438



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 86/169 (50%), Gaps = 1/169 (0%)

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V T+++ ++   + G  ++  K+ D+M  K   PN+YT+ I++  LC + + + A   L+
Sbjct: 37  VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQ 96

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            ++   L P  F+ N ++   CK G VD A  +   + ++ C  D++++ +L  G C   
Sbjct: 97  DMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYNMLTYGLCKAD 155

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++  A+++F +M      P  +T N L+    + G   +A  +++   E
Sbjct: 156 QIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIE 204



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%)

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           +R F    +  D     F YN  ++   K G+  +A  I  +M  K C P+  T+ I++ 
Sbjct: 21  SRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLR 80

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           G C   +   A+ +   M      P    VN L+SCL K G  + A+ + +R S++ +L 
Sbjct: 81  GLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLD 140

Query: 576 LPSW 579
             S+
Sbjct: 141 RISY 144


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 215/462 (46%), Gaps = 46/462 (9%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L ++H+  TYN+++   C          +   M   G+ P+   +   ++      +   
Sbjct: 39  LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 98

Query: 210 AKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           A  L+ Q     +RP  +T +T     L++ L   N A EAV +     +   QP+  T+
Sbjct: 99  AVALVDQMVEMGYRPDTITFTT-----LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            +++ GL + G++  AF     M +     D+V +NT+I  LC+   V     L KE++ 
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    P+VVTY+S+IS  C  G+   A+ + ++M    I P+ VTFN LID F K G  V
Sbjct: 214 KG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            AE + + M+     PD+ T++SLI+G+C + +L++  ++ + M  K+  P++ T+  LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
              CK  R+ D     +++    LV     Y  +I G    G+ D A  +  +M      
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRI---------------------------- 536
           PD +T++IL+ G C  G++ +A+ +F+ M +                             
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452

Query: 537 -------GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
                  G  P+ +T N++IS L    +  EA+ ++++  ED
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 203/418 (48%), Gaps = 14/418 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
           +N ++ ++ +M   D V  + + M+  G   N       ++   R  +   A  LL +  
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
              + P  VT+S     SLLN         +AV +  +   +  +PDT TF  LI GL  
Sbjct: 73  KLGYEPSIVTLS-----SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             +  +A      M   GC P++VTY  +++GLC+  ++     LL +++  ++   DVV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-AAKIEADVV 186

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            + ++I   CK   +D A  ++ EM + GI+P+ VT++ LI      G    A  +   M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +     P++VTF++LID + + G+  +  KL D+M  +++ P+++T+  LIN  C  +RL
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A++  + +   D  P    YN +I GFCK+  V++   +  EM  +    D VT+T L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQRA 568
           I G    G    A  +F +M+  G  PD +T + L+  L   G      E F  MQ++
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 186/379 (49%), Gaps = 1/379 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + D M   G  PN       V+   + G  D A  LL++    ++     ++N+++++L 
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  + D+A+ +FKE      +P+  T++ LI  L   G    A +   DM     +P++V
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+N LI    +  +     +L  ++  K    PD+ TY S+I+G+C   ++DKA  ++  
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDM-IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S    P   T+N LI GF K   +     +   M   G + D VT+++LI G   +G 
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   K+  +M    + P++ T++IL++ LC   +L  A      ++ +++    ++Y  
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G CKAG VD+   +   +  K  KP+ VT+  +I G C K  + EA ++  KM   G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495

Query: 538 CAPDDITVNSLISCLLKGG 556
             PD  T N+LI   L+ G
Sbjct: 496 PLPDSGTYNTLIRAHLRDG 514



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 184/385 (47%), Gaps = 3/385 (0%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   + EF   +S+  +  K D    L  + +   ++ + + YN L+N   +++    A+
Sbjct: 6   PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  +L  +P   T + L+ G      +  A      M   G  PD +T+ TLI GL
Sbjct: 66  ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
              N+ +    L+  +  +    P++VTY  V++G CK G +D A  + N+M +  I+  
Sbjct: 126 FLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            V FN +ID   K  ++  A  + + M + G  P+VVT+SSLI   C  G+ +   +L  
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +M  K ++PN+ TF  LI+A  KE +  +A +    +    + P  F YN +I+GFC   
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +D+A  +   M  K C PD  T+  LI G C   R+ +   +F +M   G   D +T  
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
           +LI  L   G  + A ++ ++   D
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSD 389



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 128/248 (51%)

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           KS   P +  +  ++S   K+ K D    +  +M   GI  +  T+N+LI+ F +   + 
Sbjct: 3   KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  +  +M+  GY P +VT SSL++GYC   +++  + L D+M      P+  TFT LI
Sbjct: 63  LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           + L   N+ ++A   + ++      P    Y  V++G CK G++D A  ++ +ME  + +
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            D V F  +I   C    + +A+++F +M   G  P+ +T +SLISCL   G  ++A ++
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242

Query: 565 MQRASEDQ 572
           +    E +
Sbjct: 243 LSDMIEKK 250


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 212/415 (51%), Gaps = 3/415 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  + NL++ SL  +G H  V+  F  + + G  P++      V +C+ AG  D A  ++
Sbjct: 121 SLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMV 180

Query: 215 SQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            +     G      F YN ++  L +     +A+ +F E   +   P+  T+N +I G  
Sbjct: 181 RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHV 240

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G+++  F     M   G  P+IVTYN L+SGLCR   +     L+ E+   S F PD 
Sbjct: 241 KGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMF-PDG 299

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY+ +  G  + G+      ++ E    G+   A T ++L++G  K G +  AE + E 
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 359

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ++  G +P  V +++LI+GYC+   L     + ++MK +++ P+  T+  LIN LCK   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A   + +++ + + P    +N +ID +  AG +++   ++++M++K  K D ++F  
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++   C  G++ EA++I + M+    AP+    NS+I   ++ G   +AF ++++
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 201/409 (49%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  L   G       VFD M   G +PN       +   ++ G  +A   L  Q 
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM 255

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN LL+ L +    DE   +  E       PD +T++IL  GL+R GE 
Sbjct: 256 LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 315

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +     F +    G      T + L++GLC+  +VA+  ++L E+   +   P  V Y +
Sbjct: 316 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL-EMLVHTGLVPTTVIYNT 374

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC++  +  A  I+ +M S  I+P  +T+N LI+G  K+  +  AE +   M   G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y   GQL +   +  +M+ K +  +V +F  ++ A CK  ++ +A 
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  + + D+ P   +YN +ID + ++G+ ++A ++V +M+        VT+ +L+ G 
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 554

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C   ++ EA  +   +   G  PD ++ N++IS     G  ++A  ++Q
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 205/409 (50%), Gaps = 1/409 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ +  ++ TYN ++    + G  ++   + D M  DG  PN       +S   RAG+ 
Sbjct: 221 VDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRM 280

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D  + L+ +     +    F Y+ L + L +   +   + +F E  +       +T +IL
Sbjct: 281 DETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSIL 340

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G+V KA +    +   G  P  V YNTLI+G C+V ++     + +++K +  
Sbjct: 341 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR-H 399

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD +TY ++I+G CKL  + KA  +  EM   G+ PS  TFN LID +G  G +    
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M   G   DV++F S++  +C+NG++ + + + D+M  K+++PN   +  +I+A 
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            +      A   ++++K + +      YN ++ G C++  +DEA  ++  +  +  +PD 
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           V++  +I   C KG   +A+ +  +M + G  P   T ++L+S L   G
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 628



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 189/398 (47%), Gaps = 5/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  D  +V+ D M S    P+            R G+      L ++ 
Sbjct: 266 TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +  +  + LLN L K     +A  + +        P T  +N LI G  ++ ++
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 385

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M S    PD +TYN LI+GLC++  V +  +L+ E++ KS   P V T+ +
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME-KSGVDPSVETFNT 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y   G+++K   + ++M   GIK   ++F  ++  F K G +  A  + + M+   
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 504

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+   ++S+ID Y  +G   Q   L ++MK   +S ++ T+ +L+  LC+ +++++A 
Sbjct: 505 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 564

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  L+   L P    YN +I   C  G+ D+A  ++ EM +   +P   T+  L+   
Sbjct: 565 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 624

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDD----ITVNSLISC 551
              GR+ +   ++ +ML     P      I V++ + C
Sbjct: 625 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 662



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 2/198 (1%)

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           C   PS  + N+L++    VG           +++ G  PD   ++ ++      G L+ 
Sbjct: 116 CSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDV 175

Query: 421 GLKLCDEMKGKNLS--PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            L +   M     +  P+ +++ ++I  L +  + +DA +   ++    +VP    YN +
Sbjct: 176 ALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTM 235

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           IDG  K G+++    +  +M     KP+ VT+ +L+ G C  GRM E   + ++M     
Sbjct: 236 IDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSM 295

Query: 539 APDDITVNSLISCLLKGG 556
            PD  T + L   L + G
Sbjct: 296 FPDGFTYSILFDGLTRTG 313



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 2/139 (1%)

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ +  +L+ +L    R  D R     L      P  F +N V+     AG++D A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 495 VAEM--EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           V  M   E    PD  ++ ++I G    G+  +A+ +F++M+ +G  P+ IT N++I   
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 553 LKGGMPNEAFRIMQRASED 571
           +KGG     FR+  +   D
Sbjct: 240 VKGGDLEAGFRLRDQMLHD 258



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/147 (20%), Positives = 61/147 (41%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  ++ S  TYNL+++ LC     D  + +   +R+ G  P+       +S+C   G  D
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL +     +  +   Y++L++AL       +   ++++      +P +  + I++
Sbjct: 597 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPD 295
               R     K      +M   G + D
Sbjct: 657 DAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 45.8 bits (107), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 31/169 (18%), Positives = 70/169 (41%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + YN ++ +  E G  +   ++ + M++ G   +       +    R+ + D A+ L+  
Sbjct: 510 QVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   +      YN++++A   + + D+A+ + +E  +   +P   T++ L+  L+  G 
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 629

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           V      +  M      P    Y  ++    R    ++   L KE+  K
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 678


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 171/306 (55%), Gaps = 1/306 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD   + ++I G  R G +  A     +M   GC PD+VTYNTL++GLC+   +     L
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E++ +    PD+ T+T++I GYC  GK+DKA  +++ M +  ++P  VT+N LIDG  
Sbjct: 74  LNEMRERG-VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G++  A  + + M S    P+ VT+S LID +C  GQ+       DEM  K + PN+ 
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+  +I   C+   ++  ++FL+++  N + P    YN +I G+ K   + +A  ++  M
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           E+++ +PD VT+ +LI G  + G + EA  IF KM   G  PD  T  S+I+  +  G  
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 312

Query: 559 NEAFRI 564
            EAF++
Sbjct: 313 KEAFQL 318



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 154/285 (54%), Gaps = 1/285 (0%)

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           +  +M  FG  PD V Y  +I G CR   ++    +  E+       PDVVTY ++++G 
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM-VGCGCLPDVVTYNTLLNGL 61

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           CK  ++  A G+ NEM   G+ P   TF  LI G+   G +  A  + + ML+    PD+
Sbjct: 62  CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 121

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VT+++LIDG CR G L++   L D+M  + + PN  T++ILI++ C++ ++ DA  FL +
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    ++P    YN +I G+C++GNV +    + +M   +  PD +T+  LI G+  + +
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 241

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           M +A  + N M +    PD +T N LI+     G   EA  I ++
Sbjct: 242 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 286



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 133/243 (54%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD V YT VI G+C+ G M  A  + +EM  CG  P  VT+N L++G  K   ++ AE +
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  PD+ TF++LI GYC  G+L++ L+L D M  + L P++ T+  LI+ +C+
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +  L+ A      +   ++ P    Y+ +ID  C+ G V++A   + EM  K   P+ +T
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  +I G+C  G + +      KM+    +PD IT N+LI   +K    ++AF+++    
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253

Query: 570 EDQ 572
           +++
Sbjct: 254 KEK 256



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 150/284 (52%), Gaps = 11/284 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
           TYN ++  LC+       + + + MR  G  P+       +      GK D A  L    
Sbjct: 53  TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 112

Query: 215 --SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              + RP  VT     YN+L++ + +Q + D+A  ++ +       P+  T++ILI    
Sbjct: 113 LNQRLRPDIVT-----YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 167

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
             G+V+ AF F  +M + G  P+I+TYN++I G CR   V++G + L+++   ++ SPD+
Sbjct: 168 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV-NKVSPDL 226

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TY ++I GY K  KM  A  + N M    ++P  VT+N+LI+GF   GN+  A ++ E+
Sbjct: 227 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 286

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           M + G  PD  T+ S+I+G+   G   +  +L DEM  +  +P+
Sbjct: 287 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 1/221 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           + +N  L     TYN ++  +C  G  D    ++D M S    PN       + S    G
Sbjct: 111 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 170

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + + A G L +     +  +   YNS++    +  N  +     ++       PD  T+N
Sbjct: 171 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 230

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI G  +  ++  AF+    M      PD+VTYN LI+G      V     + +++  K
Sbjct: 231 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 290

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
               PD  TY S+I+G+   G   +A  +++EM   G  P 
Sbjct: 291 G-IEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 188/345 (54%), Gaps = 4/345 (1%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           TF++N++L++LVK       + +FK++      PD  T +ILI        +  AF  F 
Sbjct: 58  TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 117

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           ++   G  PD +T NTLI GLC   E+ +      +V  +  F  D V+Y ++I+G CK 
Sbjct: 118 NILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQG-FQLDQVSYGTLINGLCKA 176

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G+      +  ++    +KP  V +N +I+   K   +  A  +   M+  G  PDVVT+
Sbjct: 177 GETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTY 236

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR---LNDARRFLKQ 462
           ++LI G+C  G++ +   L +EMK KN++P+VYTF++LI+AL KE +   +++A    ++
Sbjct: 237 TTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEE 296

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +K  +++P    YN +IDG CK  +++ A  ++ EM+E   +PD  ++TIL+ G C  GR
Sbjct: 297 MKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGR 356

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +  A   F  +L  GC  +    N +I+ L K G+  EA  +  +
Sbjct: 357 LEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSK 401



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 197/420 (46%), Gaps = 37/420 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  T  L  +S  +   H      F+ M      P + +    +SS ++  +      L 
Sbjct: 22  AIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLF 81

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            QF P  +T      + L+N    Q +   A  +F    +    PD  T N LI+GL   
Sbjct: 82  KQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFR 141

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE---VAR------GHELLKEVKFK 325
           GE+KK   F   + + G   D V+Y TLI+GLC+  E   VAR      GH +  +V   
Sbjct: 142 GEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMY 201

Query: 326 SEF-------------------------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           +                           SPDVVTYT++I G+C +GKM +A  + NEM  
Sbjct: 202 NTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKL 261

Query: 361 CGIKPSAVTFNVLIDGFGKVGN--MV-SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
             I P   TF+VLID  GK G   MV  A  + E M     +PD+VT++SLIDG C+N  
Sbjct: 262 KNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHH 321

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L + + L  EMK   + P+VY++TIL++ LCK  RL  A+ F + L         + YN 
Sbjct: 322 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNV 381

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G CKAG   EA  + ++ME K C P+ +TF  +I     K    +A  I  +M+  G
Sbjct: 382 MINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARG 441



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 140/280 (50%), Gaps = 4/280 (1%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P    +N ++S L +         L K+ +  +  +PD+ T + +I+ +C    +  A  
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFE-PNGITPDLCTLSILINCFCHQAHITLAFS 114

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           ++  +   G  P A+T N LI G    G +    Y  +++++ G+  D V++ +LI+G C
Sbjct: 115 VFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLC 174

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G+     +L  +++G ++ P+V  +  +IN+LCK   L DA     ++    + P   
Sbjct: 175 KAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 234

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI--IGHCMKGRMV-EAISIF 530
            Y  +I GFC  G + EA  ++ EM+ K   PD  TF++LI  +G   K +MV EA+S+F
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +M      PD +T NSLI  L K      A  +++   E
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKE 334



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 4/246 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ SLC+  L      V+  M   G  P+       +      GK   A  LL++ +
Sbjct: 201 YNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMK 260

Query: 219 PGEVTMSTFMYNSLLNALVKQNN---ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
              +    + ++ L++AL K+      DEA+ +F+E       PD  T+N LI GL +  
Sbjct: 261 LKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNH 320

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +++A     +M   G  PD+ +Y  L+ GLC+   +    E  + +  K     +V  Y
Sbjct: 321 HLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKG-CHLNVWPY 379

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I+G CK G   +A  + ++M   G  P+A+TF  +I    +      AE +   M++
Sbjct: 380 NVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIA 439

Query: 396 FGYLPD 401
            G L +
Sbjct: 440 RGLLKE 445


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 191/372 (51%), Gaps = 9/372 (2%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K  + ++ SL  +G  D  Q++FD     G   N  +    + +  R+GK   A  +   
Sbjct: 121 KVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEA 180

Query: 217 FR----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            +    P  V     +YN++++A  K  +   A+ +F+E       PD  TFN LI    
Sbjct: 181 MKVVCKPNLV-----VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAG 235

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R    ++    F +M   G + D VTYNTLI+  CR  ++  G  L++ +   S   P V
Sbjct: 236 RANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSV 295

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TY+++I GY KLG   +A  ++ EM +  ++P  + +N ++D   ++GN   A  +R  
Sbjct: 296 ITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRA 355

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G+  D+VT+++L+D Y + G+  + + L +EMK +  SPN+ T++ LI+A CK   
Sbjct: 356 MEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGF 415

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
             DA    + +K   L P   +Y+ ++DG CK G+ DEA  ++ EM +   +P+ +T+  
Sbjct: 416 HRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNS 475

Query: 513 LIIGHCMKGRMV 524
           L+  +  +  MV
Sbjct: 476 LLDAYGRQCLMV 487



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 143/317 (45%), Gaps = 14/317 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++ + C  G +H    ++    +S G  P+       +    + G    A  L  +
Sbjct: 261 TYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQE 320

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   V      YN++++   +  N DEA  + +         D  T+N L+    + G+
Sbjct: 321 MRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGK 380

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            ++A     +M   G SP+I+TY+ LI   C+         L ++VK K+   PDVV Y+
Sbjct: 381 FREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVK-KAGLQPDVVLYS 439

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G CK G  D+A  +  EM   GI+P+ +T+N L+D +G+   MV   + +   L F
Sbjct: 440 TLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPK---LRF 496

Query: 397 GYLPDVVTF---------SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
             LP V             SL+D   +   +    ++  EM    + PNV TF+ ++NA 
Sbjct: 497 FLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNAC 556

Query: 448 CKENRLNDARRFLKQLK 464
                + DA   L+ ++
Sbjct: 557 SHCASVEDASNLLEAMR 573



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 11/300 (3%)

Query: 138 LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           LG   +E    +  +  S  TY+ ++    ++GL      +F  MR+    P+       
Sbjct: 277 LGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTM 336

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           V    R G  D A  +               YN+LL++  KQ    EA+ + +E  +  +
Sbjct: 337 VDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGA 396

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P+  T++ LI    + G  + A   F D+   G  PD+V Y+TL+ G C+         
Sbjct: 397 SPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALA 456

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN-------SCGIKPSAV-T 369
           LL+E+   +   P+V+TY S++  Y +   M + T  + ++        +  +KPS    
Sbjct: 457 LLEEMA-DNGIRPNVITYNSLLDAYGRQCLMVRKT--FPKLRFFLLPRVTMLLKPSMQDD 513

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
              L+D   K   +++A  +   M   G  P+VVTFSS+++       +     L + M+
Sbjct: 514 QQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMR 573



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/293 (18%), Positives = 113/293 (38%), Gaps = 44/293 (15%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++     +G  D    +   M   G   +       + S  + GK   A  LL + +
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 392

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
               + +   Y++L++A  K     +A+ +F++  +   QPD   ++ L+ G  + G   
Sbjct: 393 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 452

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR------------------------ 314
           +A     +M   G  P+++TYN+L+    R   + R                        
Sbjct: 453 EALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQD 512

Query: 315 -----------------GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
                               + +E+  K+   P+VVT++S+++       ++ A+ +   
Sbjct: 513 DQQSLVDPKQKQALVLAAARVFREMA-KNGVKPNVVTFSSILNACSHCASVEDASNLLEA 571

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           M     +   VT  +L+ GF ++     AE +   + + G+   V  +++L D
Sbjct: 572 MRVFDGRVYGVTHGLLM-GF-RIRVWRDAETLFNELTTLGHNTAVAFYNALTD 622


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 201/418 (48%), Gaps = 11/418 (2%)

Query: 125 NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
           + + V++ + +PKL  +  +++       H+  TYN  + +L + G     + +FD M  
Sbjct: 6   DVIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLY 65

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
              LPN       +       K DAA  LL       +T +TF+ N L++ L K    D 
Sbjct: 66  KECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDA 125

Query: 245 AVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           A  ++K   RL  +   D  ++N+L  GL +  ++ +A   F +M      P ++TYN L
Sbjct: 126 AYELYK---RLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGL 182

Query: 303 ISGLCRVNEVARGHELLKEV---KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + G CR   + +   LL+E+   K  S+  PD+ +Y +VISG+CK  ++  A  +   M 
Sbjct: 183 LYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMI 242

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  P+ VTFN L+DG    G +  A  M E M+     P  VT++ LI G+ R  +++
Sbjct: 243 KSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRID 302

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +      +M  + + PNVYT+T LI  LC  N++ DA   LK++      P    Y  VI
Sbjct: 303 KANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVI 362

Query: 480 DGFCKAGNVDEANVIVAEMEEKR---CKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
              CK G ++ A  +  +    R   CKPD   ++ ++   C + + +EA   F +M+
Sbjct: 363 GALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMV 420



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 41/356 (11%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R  +   + F YN+ LNALVK  +  +A  +F +       P+ +T+ I+++GL    + 
Sbjct: 29  RQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E   DM S   +P     N L+S LC+  +V   +EL K  +   E S D ++Y  
Sbjct: 89  DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYK--RLSDECSLDRISYNM 146

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +  G CK  ++D+A  ++ EM    + PS +T+N                          
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEENAVVPSLLTYN-------------------------- 180

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM----KGKNLSPNVYTFTILINALCKENRL 453
                     L+ GYCR G++ Q + L +EM    KG ++ P++Y++  +I+  CK  +L
Sbjct: 181 ---------GLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQL 231

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             AR  L+++  +   P    +N ++DG C  G +DEAN +   M E+ C+P  VT+T+L
Sbjct: 232 PTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVL 291

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           I GH    R+ +A   F  MLR G  P+  T  +LI  L       +A  I++R S
Sbjct: 292 ITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMS 347



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 173/367 (47%), Gaps = 44/367 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +V+R LC+    D+   +   M S    P + ++   VS   + GK DAA  L  + 
Sbjct: 74  TYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL 133

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E ++    YN L   L K +  D A+ +F E       P   T+N L+ G  R G +
Sbjct: 134 -SDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRM 192

Query: 278 KKAFEFFYDM--GSFGCS--PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           ++A     +M  G  G    PD+ +YNT+ISG C+  ++     +L+ +  KS  SP+VV
Sbjct: 193 EQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRM-IKSGCSPNVV 251

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK-------------- 379
           T+ +++ G C  GK+D+A  ++  M     +P+AVT+ VLI G  +              
Sbjct: 252 TFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDM 311

Query: 380 ---------------VGNMVSAEYMRE------RMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                          +G +  A  + +      RM S G  P+VVT++ +I   C+ GQ+
Sbjct: 312 LRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQI 371

Query: 419 NQGLKLCDEMKGKNLS---PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            +  KL ++  G   +   P+ Y ++ ++  LC++++  +A  +  ++  + LV KP +Y
Sbjct: 372 ERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIY 431

Query: 476 NPVIDGF 482
             + DG 
Sbjct: 432 KAMADGL 438



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 86/169 (50%), Gaps = 1/169 (0%)

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V T+++ ++   + G  ++  K+ D+M  K   PN+YT+ I++  LC + + + A   L+
Sbjct: 37  VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQ 96

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            ++   L P  F+ N ++   CK G VD A  +   + ++ C  D++++ +L  G C   
Sbjct: 97  DMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYNMLTYGLCKAD 155

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++  A+++F +M      P  +T N L+    + G   +A  +++   E
Sbjct: 156 QIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIE 204



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%)

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           +R F    +  D     F YN  ++   K G+  +A  I  +M  K C P+  T+ I++ 
Sbjct: 21  SRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLR 80

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           G C   +   A+ +   M      P    VN L+SCL K G  + A+ + +R S++ +L 
Sbjct: 81  GLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLD 140

Query: 576 LPSW 579
             S+
Sbjct: 141 RISY 144


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 215/443 (48%), Gaps = 16/443 (3%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +++++ I+R+   +L L              S K YNL +RSL    + + +  ++ ++ 
Sbjct: 126 VDAIQAIRRVGGKRLVL--------------SPKCYNLALRSLLRFDMTEYMGKLYSHLV 171

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
            +G LP++      + +  + G    A       R   + M T+  N+LL    + ++  
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           +A ++      +  + + +++ ILIQGL     V++A    + M   GCS ++  Y  LI
Sbjct: 232 KACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLI 291

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GLC+   +     LL E+  +    P V TY ++I GYCK G+M  A GI   M   G 
Sbjct: 292 KGLCKEGRIHDARGLLDEMPLRG-VVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGC 350

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   T+N LI G    G +  AE +    ++ G+ P V+TF++LI+GYC+  +++  L+
Sbjct: 351 NPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALR 409

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +   M   N   ++  + +LIN L K+ RL +A+  L ++  N L P   +Y  +IDG+C
Sbjct: 410 VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYC 469

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G V  A  +   ME + C P+  T+  LI G     ++ +A+++  KM   G  P  I
Sbjct: 470 KVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVI 529

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
              +LI    K    + AFR+ +
Sbjct: 530 AYTTLIQGQCKKHEFDNAFRLFE 552



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 200/420 (47%), Gaps = 7/420 (1%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           L F  V    + +   Y L+++ LC+ G +HD+ + + D M   G +P+       +   
Sbjct: 271 LVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDA-RGLLDEMPLRGVVPSVWTYNAMIDGY 329

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            ++G+   A G+ +           + YNSL+  L      DEA  +          P  
Sbjct: 330 CKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTV 388

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TF  LI G  +   +  A     +M S  C  D+  Y  LI+ L +   +    E L E
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F +  +P+VV YTS+I GYCK+G +  A  ++  M   G  P+A T+  LI G  +  
Sbjct: 449 M-FANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +  +M   G  P V+ +++LI G C+  + +   +L + M+   L+P+   + 
Sbjct: 508 KLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYN 567

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           +L +ALCK  R  +A  FL +     +V     Y  ++DGF KAGN D A V++ +M  +
Sbjct: 568 VLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            CK D  T+++L+   C + ++ EA+SI ++M   G   + +    +IS ++K G  + A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 191/410 (46%), Gaps = 5/410 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  D  + + +   + G  P        ++   +A + D A  + S  
Sbjct: 356 TYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +    Y  L+N L+K+    EA     E F     P+   +  +I G  ++G V
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMV 474

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   GC P+  TY +LI GL +  ++ +   L+ +++ +   +P V+ YT+
Sbjct: 475 GAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ-EDGITPGVIAYTT 533

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  + D A  ++  M   G+ P    +NVL D   K G    AE     ++  G
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVRKG 590

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +   VT++SL+DG+ + G  +    L ++M  +    ++YT+++L+ ALCK+ +LN+A 
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L Q+  + +      Y  +I    K G  D A  +  EM     KP   T+T+ I  +
Sbjct: 651 SILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C  G++ EA  +  +M R G  PD +T +  I+     G  + AF  ++R
Sbjct: 711 CKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKR 760



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 206/483 (42%), Gaps = 73/483 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y ++++ L E        V+   M  DG   N  M    +    + G+   A+GLL + 
Sbjct: 251 SYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEM 310

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  S + YN++++   K     +A+ +     +    PD WT+N LI GL   G++
Sbjct: 311 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKL 369

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL------------------- 318
            +A E      + G +P ++T+  LI+G C+   +     +                   
Sbjct: 370 DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429

Query: 319 ---------LKEVK------FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                    LKE K      F +  +P+VV YTS+I GYCK+G +  A  ++  M   G 
Sbjct: 430 INVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGC 489

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+A T+  LI G  +   +  A  +  +M   G  P V+ +++LI G C+  + +   +
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFR 549

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L + M+   L+P+   + +L +ALCK  R  +A  FL +     +V     Y  ++DGF 
Sbjct: 550 LFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFS 606

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-------------- 529
           KAGN D A V++ +M  + CK D  T+++L+   C + ++ EA+SI              
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666

Query: 530 ---------------------FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
                                FN+M+  G  P   T    IS   K G   EA  ++   
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM 726

Query: 569 SED 571
             D
Sbjct: 727 ERD 729



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 182/415 (43%), Gaps = 20/415 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y  +++  C+    D+   +F+ M  +G  P+         +  ++G+ + A   L   
Sbjct: 530 AYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--V 587

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G V ++   Y SL++   K  N D A  + ++      + D +T+++L+Q L +  ++
Sbjct: 588 RKG-VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKL 646

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G   +IV Y  +IS + +  +      L  E+   S   P   TYT 
Sbjct: 647 NEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM-ISSGHKPSATTYTV 705

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            IS YCK+G++++A  +  EM   G+ P  VT+++ I+G G +G M  A    +RM+   
Sbjct: 706 FISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDAS 765

Query: 398 YLPDVVTFSSLIDGYCRNG----------------QLNQGLKLCDEMKGKNLSPNVYTFT 441
             P+  T+  L+  + +                  +LN   +L + M    L+P V T++
Sbjct: 766 CEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYS 825

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            +I   CK  RL +A   L  +    + P   +Y  +I   C      +    V +M E 
Sbjct: 826 SIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEF 885

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             +P   ++  LI+G C +G    A S+F  +L +    +++    L   LLK G
Sbjct: 886 GFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAG 940



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 163/372 (43%), Gaps = 17/372 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++    + G  D   V+ + M ++G   +       + +  +  K + A  +L Q 
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y  +++ ++K+   D A  +F E      +P   T+ + I    +IG++
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQI 716

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     +M   G +PD+VTY+  I+G   +  + R    LK +   +   P+  TY  
Sbjct: 717 EEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRM-VDASCEPNCWTYWL 775

Query: 338 VISGYCKLGKMDK----ATGIYN--EMNSC----------GIKPSAVTFNVLIDGFGKVG 381
           ++  + K+  ++      +G++N  E+N+           G+ P+ VT++ +I GF K  
Sbjct: 776 LLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + + ML     P+   ++ LI   C      + +    +M      P + ++ 
Sbjct: 836 RLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYH 895

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI  LC E   + A+     L   D       +  + DG  KAG+VD  + ++A M+ +
Sbjct: 896 YLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNR 955

Query: 502 RCKPDKVTFTIL 513
            C+ D  ++++L
Sbjct: 956 HCRIDSESYSML 967



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 133/306 (43%), Gaps = 17/306 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y +++  + + G HD  + +F+ M S GH P++     F+SS  + G+ + A+ L+ + 
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM 726

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ-------- 269
               VT     Y+  +N        D A    K       +P+ WT+ +L++        
Sbjct: 727 ERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLI 786

Query: 270 --------GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
                   G+    E+   ++    M   G +P +VTY+++I+G C+   +     LL  
Sbjct: 787 NAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDH 846

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K+  SP+   YT +I   C +    K      +M   G +P   +++ LI G    G
Sbjct: 847 MLGKA-ISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEG 905

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           +   A+ +   +L   Y  + V +  L DG  + G ++   +L   M  ++   +  +++
Sbjct: 906 DYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYS 965

Query: 442 ILINAL 447
           +L +++
Sbjct: 966 MLTDSI 971



 Score = 42.4 bits (98), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 2/139 (1%)

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           LSP  Y   +   +L + +      +    L    L+P    YN +I  +CK G++  A+
Sbjct: 142 LSPKCYNLAL--RSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAH 199

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                + E   + D  T   L++G+C    + +A  +   M  +GC  ++ +   LI  L
Sbjct: 200 RYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGL 259

Query: 553 LKGGMPNEAFRIMQRASED 571
            +     EA  ++    +D
Sbjct: 260 YEARCVREALVLVFMMVQD 278


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 208/413 (50%), Gaps = 6/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV-SSCIRAGKCD--AAKGLL 214
           TY  V+R+LC  G       V D MR  G  P  PM    + ++C R G     +A  +L
Sbjct: 117 TYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVL 176

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNA-DEAVYMFKEYFRLYS-QPDTWTFNILIQGLS 272
                    +     N +LNA+  Q  + DEA+ + ++    +   PD  ++N +++GL 
Sbjct: 177 QDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLC 236

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
                 +  +   +M   GC P++VT+NTLI  LCR     R H++L ++      +PD+
Sbjct: 237 MAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM-VDHGCTPDI 295

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             Y +V+ G CK G ++ A  I + M S G+KP+ V +N ++ G         AE +   
Sbjct: 296 RMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAE 355

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M       D VTF+ L+D +C+NG + + ++L ++M      P+V T+T +IN  CKE  
Sbjct: 356 MFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGL 415

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A   LK +      P    Y  V+ G C A    +A  ++++M E+ C P+ VTF  
Sbjct: 416 IDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNT 475

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +I   C KG + +AI +  +ML  GC+PD I+ +++I  L K G  +EA  ++
Sbjct: 476 VINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 1/380 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC  GL + V  V   M   G  P+  M    +    + G  + A  +L + 
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN++L  L      ++A  +  E F      D  TFNIL+    + G V
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +  E    M   GC PD++TY T+I+G C+   +     LLK +       P+ ++YT 
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMA-ACGCRPNTISYTI 440

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G C   +   A  + ++M   G  P+ VTFN +I+   K G +  A  + ++ML  G
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG 500

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++++S++IDG  + G+ ++ L+L + M  K +SPN   ++ + +AL KE R+N   
Sbjct: 501 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVI 560

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    ++   +     +YN VI   CK G  D A   +A M    C P++ T+TILI G 
Sbjct: 561 QMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGL 620

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G + EA  +  ++   G
Sbjct: 621 ASEGFVKEAQEMLTELCSKG 640



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/427 (24%), Positives = 200/427 (46%), Gaps = 1/427 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L+ L     +   +    +YN V++ LC       VQ + + M   G  PN       +
Sbjct: 208 ALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLI 267

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               R G  +    +L+Q      T    MY ++L+ + K+ + + A  +         +
Sbjct: 268 GYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLK 327

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+   +N +++GL      ++A E   +M    C  D VT+N L+   C+   V R  EL
Sbjct: 328 PNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIEL 387

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+++  +    PDV+TYT+VI+G+CK G +D+A  +   M +CG +P+ +++ +++ G  
Sbjct: 388 LEQM-LEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLC 446

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
                V AE +  +M+  G  P+ VTF+++I+  C+ G + Q ++L  +M     SP++ 
Sbjct: 447 SAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLI 506

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           +++ +I+ L K  + ++A   L  +    + P   +Y+ +     K G ++    +   +
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           ++   + D V +  +I   C +G    AI     M+  GC P++ T   LI  L   G  
Sbjct: 567 QDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFV 626

Query: 559 NEAFRIM 565
            EA  ++
Sbjct: 627 KEAQEML 633



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 159/346 (45%), Gaps = 1/346 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            + Y  V+  +C+ G  +    + D M S G  PN       +     A + + A+ LL+
Sbjct: 295 IRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLA 354

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +    +  +    +N L++   +       + + ++       PD  T+  +I G  + G
Sbjct: 355 EMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEG 414

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + +A      M + GC P+ ++Y  ++ GLC         +L+ ++  +   SP+ VT+
Sbjct: 415 LIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQM-IEQGCSPNPVTF 473

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +VI+  CK G +++A  +  +M   G  P  ++++ +IDG GK G    A  +   M++
Sbjct: 474 NTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 533

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ + +SS+     + G++N+ +++ D ++   +  +   +  +I++LCK    + 
Sbjct: 534 KGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDR 593

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           A  FL  +  +  +P    Y  +I G    G V EA  ++ E+  K
Sbjct: 594 AIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSK 639



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 1/316 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN V++ LC     +  + +   M  +    +       V    + G       LL Q  
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                     Y +++N   K+   DEAV + K       +P+T ++ I+++GL       
Sbjct: 393 EHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A +    M   GCSP+ VT+NT+I+ LC+   V +  ELLK++      SPD+++Y++V
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG-CSPDLISYSTV 511

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G  K GK D+A  + N M + G+ P+ + ++ +     K G +     M + +     
Sbjct: 512 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTI 571

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             D V ++++I   C+ G  ++ ++    M      PN  T+TILI  L  E  + +A+ 
Sbjct: 572 RSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQE 631

Query: 459 FLKQLKWNDLVPKPFM 474
            L +L     + K FM
Sbjct: 632 MLTELCSKGALRKHFM 647



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 137/343 (39%), Gaps = 79/343 (23%)

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YN ++SG CR  ++A    L   V       P+  TY  V+   C  G++  A  + +EM
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVPVP----PNAYTYFPVVRALCARGRIADALSVLDEM 141

Query: 359 NSCGIKPSAVTFNVLID----------------------GFG---KVGNM---------- 383
              G  P    ++V+++                      G G    VGN           
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQ 201

Query: 384 -----VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
                 +   +R+   SFG  PDVV++++++ G C   +  +   L +EM      PNV 
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV---------- 488
           TF  LI  LC+        + L Q+  +   P   MY  V+DG CK G++          
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 489 -------------------------DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                                    ++A  ++AEM +  C  D VTF IL+   C  G +
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              I +  +ML  GC PD IT  ++I+   K G+ +EA  +++
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLK 424



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 43/203 (21%)

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++++ GYCR GQL    +L   +    + PN YT+  ++ ALC   R+ DA   L +++
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 465 WNDLVPKPFMYNPVIDGFC---------------------------------------KA 485
                P P MY+ +++  C                                       + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 486 GNVDEANVIVAEMEEK-RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           G+VDEA  ++ ++     C PD V++  ++ G CM  R      +  +M+R+GC P+ +T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 545 VNSLISCLLKGGMPNEAFRIMQR 567
            N+LI  L + G+     +++ +
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQ 285



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 82/182 (45%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N V+  LC+ GL +    +   M  +G  P+       +    +AGK D A  LL+  
Sbjct: 472 TFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 531

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +T +Y+S+ +AL K+   +  + MF     +  + D   +N +I  L + G  
Sbjct: 532 VNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGT 591

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A EF   M S GC P+  TY  LI GL     V    E+L E+  K       + +  
Sbjct: 592 DRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHFMKHFG 651

Query: 338 VI 339
           ++
Sbjct: 652 IV 653


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 4/346 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ST   N+LL  LV     D A   F+   R    PD +TFN +I GL RIG+++KA +  
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE---LLKEVKFKSEFSPDVVTYTSVISG 341
            D+ ++G +P + TYN+LI G C+       +    LLKE+  ++  SP  VT+  +I+G
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEM-VEAGISPTAVTFGVLING 273

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YCK      A  ++ EM   GI  S VT+N LI G    G +     + E M   G  P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            +TF  ++ G+C+ G +       D M  +N+ P+V  + ILI+   +  ++ DA    +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +    + P    YN +I GF ++G+   A+ ++ EM+EK  + D VT+ +LI   C KG
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            + +A+ + ++M  +G  P+ +T N++I      G    A+ I  R
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTR 499



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 184/372 (49%), Gaps = 7/372 (1%)

Query: 191 SPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           SP I  F   +S   R G+   A  +    +   +  S   YNSL++   K+  A    +
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYH 247

Query: 248 ---MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
              + KE       P   TF +LI G  +      A   F +M   G +  +VTYN+LIS
Sbjct: 248 VDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLIS 307

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC   +V  G +L++E++     SP+ +T+  V+ G+CK G M  A    + M    ++
Sbjct: 308 GLCSEGKVEEGVKLMEEME-DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  V +N+LID + ++G M  A  ++E M   G  P+V T++ LI G+ R+G       L
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEMK K +  +V T+ +LI ALC +  +  A + L ++    L P    YN +I GFC 
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            GN+  A  I   ME+ R + + VT+ + I   C  G+M EA  + N+ML     P+ IT
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546

Query: 545 VNSLISCLLKGG 556
             ++   +++ G
Sbjct: 547 YETIKEGMMEKG 558



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 4/338 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDS---VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           L  S  TYN ++   C+ G   +   V ++   M   G  P +      ++   +     
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           AA  +  + +   +  S   YNSL++ L  +   +E V + +E   L   P+  TF  ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +G  + G +  A ++   M      PD+V YN LI    R+ ++      +KE   K   
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA-VKEAMAKKGI 400

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP+V TY  +I+G+ + G    A+G+ +EM   GI+   VT+NVLI      G +  A  
Sbjct: 401 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVK 460

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G  P+ +T++++I G+C  G +    ++   M+      NV T+ + I   C
Sbjct: 461 LLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFC 520

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +  ++++A   L ++    LVP    Y  + +G  + G
Sbjct: 521 QIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 191/372 (51%), Gaps = 9/372 (2%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K  + ++ SL  +G  D  Q++FD     G   N  +    + +  R+GK   A  +   
Sbjct: 122 KVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEA 181

Query: 217 FR----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            +    P  V     +YN++++A  K  +   A+ +F+E       PD  TFN LI    
Sbjct: 182 MKVVCKPNLV-----VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAG 236

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R    ++    F +M   G + D VTYNTLI+  CR  ++  G  L++ +   S   P V
Sbjct: 237 RANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSV 296

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TY+++I GY KLG   +A  ++ EM +  ++P  + +N ++D   ++GN   A  +R  
Sbjct: 297 ITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRA 356

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G+  D+VT+++L+D Y + G+  + + L +EMK +  SPN+ T++ LI+A CK   
Sbjct: 357 MEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGF 416

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
             DA    + +K   L P   +Y+ ++DG CK G+ DEA  ++ EM +   +P+ +T+  
Sbjct: 417 HRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNS 476

Query: 513 LIIGHCMKGRMV 524
           L+  +  +  MV
Sbjct: 477 LLDAYGRQCLMV 488



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 143/317 (45%), Gaps = 14/317 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++ + C  G +H    ++    +S G  P+       +    + G    A  L  +
Sbjct: 262 TYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQE 321

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   V      YN++++   +  N DEA  + +         D  T+N L+    + G+
Sbjct: 322 MRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGK 381

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            ++A     +M   G SP+I+TY+ LI   C+         L ++VK K+   PDVV Y+
Sbjct: 382 FREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVK-KAGLQPDVVLYS 440

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G CK G  D+A  +  EM   GI+P+ +T+N L+D +G+   MV   + +   L F
Sbjct: 441 TLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPK---LRF 497

Query: 397 GYLPDVVTF---------SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
             LP V             SL+D   +   +    ++  EM    + PNV TF+ ++NA 
Sbjct: 498 FLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNAC 557

Query: 448 CKENRLNDARRFLKQLK 464
                + DA   L+ ++
Sbjct: 558 SHCASVEDASSLLEAMR 574



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 127/299 (42%), Gaps = 9/299 (3%)

Query: 138 LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           LG   +E    +  +  S  TY+ ++    ++GL      +F  MR+    P+       
Sbjct: 278 LGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTM 337

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           V    R G  D A  +               YN+LL++  KQ    EA+ + +E  +  +
Sbjct: 338 VDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGA 397

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P+  T++ LI    + G  + A   F D+   G  PD+V Y+TL+ G C+         
Sbjct: 398 SPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALA 457

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKM-----DKATGIYNEMNSCGIKPSAVTFN- 371
           LL+E+   +   P+V+TY S++  Y +   M      K         +  +KPS V ++ 
Sbjct: 458 LLEEMA-DNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPS-VDYDQ 515

Query: 372 -VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
             L+D   K   +++A  +   M   G  P+VVTFSS+++       +     L + M+
Sbjct: 516 QSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMR 574



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/293 (18%), Positives = 113/293 (38%), Gaps = 44/293 (15%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++     +G  D    +   M   G   +       + S  + GK   A  LL + +
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMK 393

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
               + +   Y++L++A  K     +A+ +F++  +   QPD   ++ L+ G  + G   
Sbjct: 394 QRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPD 453

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR------------------------ 314
           +A     +M   G  P+++TYN+L+    R   + R                        
Sbjct: 454 EALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDY 513

Query: 315 -----------------GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
                               + +E+  K+   P+VVT++S+++       ++ A+ +   
Sbjct: 514 DQQSLVDPKQKQALVLAAARVFREMA-KNGVKPNVVTFSSILNACSHCASVEDASSLLEA 572

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           M     +   VT  +L+ GF ++     AE +   + + G+   V  +++L D
Sbjct: 573 MRVFDGRVYGVTHGLLM-GF-RIRVWRDAETLFNELTTLGHNTAVAFYNALTD 623


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 218/450 (48%), Gaps = 16/450 (3%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNH---SFKTYNLVMRSLCEMGLHD 173
           LC KL  ++ L   K +D     +  LE        NH       YN ++   C     D
Sbjct: 94  LCTKL--IHGLFTSKTIDKAIQVMHILE--------NHGHPDLIAYNAIITGFCRANRID 143

Query: 174 SVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           S   V D M++ G  P+       + S    G  D+A    +Q        +   Y  L+
Sbjct: 144 SAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILI 203

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
            A + Q   DEA+ +  E   +  QPD +T+N +I+G+ R G V +AF+    + S G +
Sbjct: 204 EATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYA 263

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           PD++TYN L+ GL    +   G+EL+ ++  +     +VVTY+ +IS  C+ GK+++  G
Sbjct: 264 PDVITYNILLRGLLNQGKWEAGYELMSDMVARG-CEANVVTYSVLISSVCRDGKVEEGVG 322

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +  +M   G+KP    ++ LI    K G +  A  + + M+S G +PD+V +++++   C
Sbjct: 323 LLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLC 382

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           +  + ++ L + +++     SPN  ++  + +AL        A   + ++    + P   
Sbjct: 383 KQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGI 442

Query: 474 MYNPVIDGFCKAGNVDEANVIVA--EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            YN +I   C+ G VDEA  ++   EME   CKP  V++ I+++G C   R+ +AI +  
Sbjct: 443 TYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLA 502

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            M+  GC P++ T   LI  +  GG  N+A
Sbjct: 503 AMVDKGCRPNETTYTFLIEGIGFGGCLNDA 532



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 168/337 (49%), Gaps = 1/337 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN+++    + N  D A  +          PD  T+NILI  L   G +  A EF   + 
Sbjct: 129 YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
              C P +VTY  LI        +    +LL E+  +    PD+ TY S+I G C+ G +
Sbjct: 189 KENCKPTVVTYTILIEATLLQGGIDEAMKLLDEM-LEINLQPDMFTYNSIIRGMCREGYV 247

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  I + ++S G  P  +T+N+L+ G    G   +   +   M++ G   +VVT+S L
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I   CR+G++ +G+ L  +MK K L P+ Y +  LI ALCKE R++ A   L  +  +  
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           VP    YN ++   CK    DEA  I  ++ E  C P+  ++  +       G  V A+ 
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +  +ML  G  PD IT NSLISCL + GM +EA  ++
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELL 464



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 167/333 (50%), Gaps = 2/333 (0%)

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  N +E++Y  +       +PD      LI GL     + KA +  + + + G  PD++
Sbjct: 69  KAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLI 127

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            YN +I+G CR N +   +++L  +K K  FSPD+VTY  +I   C  G +D A    N+
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKG-FSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           +     KP+ VT+ +LI+     G +  A  + + ML     PD+ T++S+I G CR G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +++  ++   +  K  +P+V T+ IL+  L  + +       +  +           Y+ 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I   C+ G V+E   ++ +M++K  KPD   +  LI   C +GR+  AI + + M+  G
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C PD +  N++++CL K    +EA  I ++  E
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGE 399



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 162/398 (40%), Gaps = 72/398 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ SLC  G+ DS     + +  +   P        + + +  G  D A  LL + 
Sbjct: 163 TYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEM 222

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YNS++  + ++   D A  +          PD  T+NIL++GL   G+ 
Sbjct: 223 LEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKW 282

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK------------ 325
           +  +E   DM + GC  ++VTY+ LIS +CR  +V  G  LLK++K K            
Sbjct: 283 EAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPL 342

Query: 326 ----------------------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                                     PD+V Y ++++  CK  + D+A  I+ ++   G 
Sbjct: 343 IAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGC 402

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+A ++N +       G+ V A  M   ML  G  PD +T++SLI   CR+G +++ ++
Sbjct: 403 SPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIE 462

Query: 424 LCDEMK-------------------------------------GKNLSPNVYTFTILINA 446
           L  +M+                                      K   PN  T+T LI  
Sbjct: 463 LLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEG 522

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
           +     LNDAR     L   D + +   +  +   FCK
Sbjct: 523 IGFGGCLNDARDLATTLVNMDAISE-HSFERLYKTFCK 559



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G  N+ L     +  K   P+V   T LI+ L     ++ A + +  L+ N   P  
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILE-NHGHPDL 126

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +I GFC+A  +D A  ++  M+ K   PD VT+ ILI   C +G +  A+   N+
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 533 MLRIGCAPDDITVNSLI-SCLLKGGMPNEAFRIMQRASEDQNLQ 575
           +L+  C P  +T   LI + LL+GG+ +EA +++    E  NLQ
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGI-DEAMKLLDEMLE-INLQ 228


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 204/424 (48%), Gaps = 2/424 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL ++H+  TY++ +   C          +   M   G+ P+   +   ++      +  
Sbjct: 103 NLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 162

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L+ Q         T  + +L++ L + N A EAV + +       QPD  T+  +I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + GE   A      M       D+V YNT+I GLC+   +    +L  +++ K   
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG-I 281

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV TY  +IS  C  G+   A+ + ++M    I P  V FN LID F K G +V AE 
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341

Query: 389 MRERMLSFGY-LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
           + + M+   +  PDVV +++LI G+C+  ++ +G+++  EM  + L  N  T+T LI+  
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            +    ++A+   KQ+  + + P    YN ++DG C  GNV+ A V+   M+++  K D 
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+T +I   C  G++ +   +F  +   G  P+ +T  +++S   + G+  EA  +   
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521

Query: 568 ASED 571
             ED
Sbjct: 522 MKED 525



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 198/408 (48%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++  L +         + + M   G  P+       ++   + G+ D A  LL++ 
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G++     +YN++++ L K  + D+A  +F +      +PD +T+N LI  L   G  
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     DM     +PD+V +N LI    +  ++    +L  E+       PDVV Y +
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK  ++++   ++ EM+  G+  + VT+  LI GF +  +  +A+ + ++M+S G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++T++ L+DG C NG +   L + + M+ +++  ++ T+T +I ALCK  ++ D  
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    Y  ++ GFC+ G  +EA+ +  EM+E    P+  T+  LI   
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              G    +  +  +M   G A D  T   L++ +L  G  +++F  M
Sbjct: 542 LRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSFLDM 588



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 169/345 (48%), Gaps = 2/345 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D A GL           S   ++ LL+A+ K N  D  + + ++   L    + +T++
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           I I    R  ++  A      M   G  P IVT N+L++G C  N ++    L+ ++  +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VE 173

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             + PD VT+T+++ G  +  K  +A  +   M   G +P  VT+  +I+G  K G    
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +  +M       DVV ++++IDG C+   ++    L ++M+ K + P+V+T+  LI+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCK 504
            LC   R +DA R L  +   ++ P    +N +ID F K G + EA  +  EM + K C 
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           PD V +  LI G C   R+ E + +F +M + G   + +T  +LI
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 170/329 (51%), Gaps = 2/329 (0%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D+A+ +F +  +    P    F+ L+  ++++ +          M + G S ++ TY+  
Sbjct: 57  DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+  CR ++++    +L ++  K  + P +VT  S+++G+C   ++ +A  + ++M   G
Sbjct: 117 INYFCRRSQLSLALAILGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +P  VTF  L+ G  +      A  + ERM+  G  PD+VT+ ++I+G C+ G+ +  L
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L ++M+   +  +V  +  +I+ LCK   ++DA     +++   + P  F YNP+I   
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI-GCAPD 541
           C  G   +A+ ++++M EK   PD V F  LI     +G++VEA  ++++M++   C PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +  N+LI    K     E   + +  S+
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 205/413 (49%), Gaps = 7/413 (1%)

Query: 158 TYNLVMRSLCEMGLH----DSVQV--VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           TY ++M   C+        D+ Q   + + M  +G  P       ++    R G  ++A 
Sbjct: 251 TYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESAL 310

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             +         ++ + YN++++ L K+   DEA+ + +E       PD +T++ILI G 
Sbjct: 311 DFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGF 370

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G+V+K      +M      P +V+Y++L  GLC+        ++ +++   + +  D
Sbjct: 371 CKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLG-AAGYKYD 429

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
              Y+ +I G+C  G +D A  +  EM    + P    F  L+ GF K+G  V+A     
Sbjct: 430 QTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFN 489

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            ML  G LP + T + +ID +CR G++ + L L +EM+ + + PN++T+  +IN LCKE 
Sbjct: 490 MMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKER 549

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +   A      +   +++P   +Y+ +IDGF K  N  +A ++ A M +    PD V +T
Sbjct: 550 KSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYT 609

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ILI   C + RM EA ++F KM   G  PD I+  S+I+   + G   +A+ +
Sbjct: 610 ILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWAL 662



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 208/431 (48%), Gaps = 3/431 (0%)

Query: 143 LEFSRVNLSLNHSFKTY--NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           L+F R  +S N     Y  N ++  LC+ G  D    V + M+S G  P+       +  
Sbjct: 310 LDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHG 369

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             + G  +    L+ + +   +  S   Y+SL + L K+  +D ++ +F++      + D
Sbjct: 370 FCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYD 429

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
              ++ILI+G    G++  A +   +M     +PD   + +L+ G C++       E   
Sbjct: 430 QTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFN 489

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  +    P + T   +I  +C+ G++++A  + NEM + GI P+  T+N +I+   K 
Sbjct: 490 -MMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKE 548

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
                A  +   ML    LP VV +S+LIDG+ +     + L L   M    ++P++  +
Sbjct: 549 RKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAY 608

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           TILIN LC  +R+ +A    K++  N + P    Y  VI GFC+ G++ +A  +  EM +
Sbjct: 609 TILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQ 668

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +   P  VT+T L+ G+C   R+  A  + ++M R G  PD +T N LI+   + G  ++
Sbjct: 669 RGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDK 728

Query: 561 AFRIMQRASED 571
           A  ++    E+
Sbjct: 729 ALEMLNEMKEN 739



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 170/353 (48%), Gaps = 7/353 (1%)

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
           P +   S  +++ L+      +  + AV +F +  +   +  T + N L++ L+     +
Sbjct: 172 PKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRRE 231

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN------EVARGHELLKEVKFKSEFSPDV 332
                F +M S G  P++ TY  +++  C+ N      +  +  E+L+E++   E SP V
Sbjct: 232 FLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGE-SPTV 290

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY++ I G C++G ++ A      + S     +   +N +I G  K G +  A  + E 
Sbjct: 291 VTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEE 350

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G  PDV T+S LI G+C+ G + +GL L +EMK  N+ P++ +++ L + LCK+  
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            + +    + L           Y+ +I GFC  G++D A+ ++ EM      PD   F  
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFES 470

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           L+ G C  G  V A+  FN ML  G  P   T N +I    + G   EA  +M
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLM 523



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V+ F  LI  +  N  L   + +  + K   L  +  +   L+  L + NR    R   +
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV-------IVAEMEEKRCKPDKVTFTILI 514
           ++K     P  F Y  +++ +CK GN  EA++       I+ EME     P  VT++  I
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCK-GNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G C  G +  A+     ++      +    N++I  L K G  +EA ++++
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLE 349


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 172/329 (52%), Gaps = 1/329 (0%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           ++N L+  LV+      A  +F E      +    +FN +I G+ R G++  A      M
Sbjct: 242 LFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRM 301

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G +PD+ TY  LI GLCRV  +     + +++  +    P+ V +T +I  +CK G 
Sbjct: 302 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG-MKPNAVVFTILIDAHCKKGD 360

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            +    ++ EM   G++P AVT+N +++G  +  ++ SA  +   M S G  PD VT+++
Sbjct: 361 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 420

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LIDGYC+  +L+  +++   M  + +  +  T+T LI+ L K  R  DA R L ++    
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P    Y  VID FC+ G+V     ++ EM+ K  KP  VT+ +++ G C  G+M  A 
Sbjct: 481 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD 540

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            + N M+ IG +PDDIT N L+    K G
Sbjct: 541 MLLNAMINIGVSPDDITYNILLDGHCKHG 569



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 181/365 (49%), Gaps = 7/365 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K +N++MR L  +G   S Q VFD M+S G           +S   RAG  D A+ L  +
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                VT   + Y +L+  L +    ++A  +F++      +P+   F ILI    + G+
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            +   E   +M   G  PD VTYN +++GLCR  ++     ++ E++  +   PD VTYT
Sbjct: 361 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR-SAGLRPDTVTYT 419

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYCK  ++D A  I   M + G+    VT+  LI G  K G    AE +   M+  
Sbjct: 420 TLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEA 479

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T++ +ID +CR G +  GL+L  EM+ K   P V T+ +++N  CK  ++ +A
Sbjct: 480 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNA 539

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILII 515
              L  +    + P    YN ++DG CK G V +    + E++  K   PD   +T  I+
Sbjct: 540 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD----IEELKSAKGTVPDLGVYTS-IV 594

Query: 516 GHCMK 520
           G  +K
Sbjct: 595 GEIVK 599



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 187/366 (51%), Gaps = 4/366 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P + +    +   +R G+  +A+ +  + +   V  +   +N++++ + +  + D A  +
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 297

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            +        PD +T+  LIQGL R+G ++ A   F  M   G  P+ V +  LI   C+
Sbjct: 298 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 357

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             +     EL +E++ +    PD VTY ++++G C+   +  A+GI  EM S G++P  V
Sbjct: 358 KGDAETMLELHREMRERG-VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+  LIDG+ K   +  A  +++ M++ G   D VT+++LI G  + G+     ++  EM
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
               L P+  T+T++I+A C++  +    R LK+++     P    YN +++GFCK G +
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 536

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
             A++++  M      PD +T+ IL+ GHC  G++ +   + +     G  PD     S+
Sbjct: 537 KNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAK---GTVPDLGVYTSI 593

Query: 549 ISCLLK 554
           +  ++K
Sbjct: 594 VGEIVK 599



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 145/296 (48%), Gaps = 1/296 (0%)

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           +SR     +A  F+  +   G  P+   +N L+  L R+ E+A    +  E++ +     
Sbjct: 215 MSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG-VRR 273

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            VV++ ++ISG C+ G +D A  ++  M+  G+ P   T+  LI G  +VG +  A  + 
Sbjct: 274 TVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVF 333

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E+M   G  P+ V F+ LID +C+ G     L+L  EM+ + + P+  T+  ++N LC+ 
Sbjct: 334 EKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 393

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             L  A   + +++   L P    Y  +IDG+CK   +D A  I   M  +    D+VT+
Sbjct: 394 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 453

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           T LI G    GR  +A  +  +M+  G  PD+ T   +I    + G      R+++
Sbjct: 454 TALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 509



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 131/243 (53%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+   +  ++    +LG++  A  +++EM S G++ + V+FN +I G  + G++  AE
Sbjct: 236 LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAE 295

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  RM   G  PDV T+ +LI G CR G++     + ++M G+ + PN   FTILI+A 
Sbjct: 296 TLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAH 355

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK+          ++++   + P    YN +++G C+A ++  A+ IV EM     +PD 
Sbjct: 356 CKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDT 415

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+T LI G+C +  +  A+ I   M+  G   D++T  +LIS L K G   +A R++  
Sbjct: 416 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 475

Query: 568 ASE 570
             E
Sbjct: 476 MME 478



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 50/109 (45%)

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           F  QL    L P+  ++N ++    + G +  A  +  EM+ +  +   V+F  +I G C
Sbjct: 227 FYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMC 286

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             G +  A ++  +M   G  PD  T  +LI  L + G   +A  + ++
Sbjct: 287 RAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEK 335


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 172/329 (52%), Gaps = 1/329 (0%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           ++N L+  LV+      A  +F E      +    +FN +I G+ R G++  A      M
Sbjct: 118 LFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRM 177

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G +PD+ TY  LI GLCRV  +     + +++  +    P+ V +T +I  +CK G 
Sbjct: 178 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG-MKPNAVVFTILIDAHCKKGD 236

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            +    ++ EM   G++P AVT+N +++G  +  ++ SA  +   M S G  PD VT+++
Sbjct: 237 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 296

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LIDGYC+  +L+  +++   M  + +  +  T+T LI+ L K  R  DA R L ++    
Sbjct: 297 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 356

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P    Y  VID FC+ G+V     ++ EM+ K  KP  VT+ +++ G C  G+M  A 
Sbjct: 357 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD 416

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            + N M+ IG +PDDIT N L+    K G
Sbjct: 417 MLLNAMINIGVSPDDITYNILLDGHCKHG 445



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 181/365 (49%), Gaps = 7/365 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K +N++MR L  +G   S Q VFD M+S G           +S   RAG  D A+ L  +
Sbjct: 117 KLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 176

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                VT   + Y +L+  L +    ++A  +F++      +P+   F ILI    + G+
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            +   E   +M   G  PD VTYN +++GLCR  ++     ++ E++  +   PD VTYT
Sbjct: 237 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR-SAGLRPDTVTYT 295

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYCK  ++D A  I   M + G+    VT+  LI G  K G    AE +   M+  
Sbjct: 296 TLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEA 355

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T++ +ID +CR G +  GL+L  EM+ K   P V T+ +++N  CK  ++ +A
Sbjct: 356 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNA 415

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILII 515
              L  +    + P    YN ++DG CK G V +    + E++  K   PD   +T  I+
Sbjct: 416 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD----IEELKSAKGTVPDLGVYTS-IV 470

Query: 516 GHCMK 520
           G  +K
Sbjct: 471 GEIVK 475



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 187/366 (51%), Gaps = 4/366 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P + +    +   +R G+  +A+ +  + +   V  +   +N++++ + +  + D A  +
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 173

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            +        PD +T+  LIQGL R+G ++ A   F  M   G  P+ V +  LI   C+
Sbjct: 174 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 233

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             +     EL +E++ +    PD VTY ++++G C+   +  A+GI  EM S G++P  V
Sbjct: 234 KGDAETMLELHREMRERG-VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+  LIDG+ K   +  A  +++ M++ G   D VT+++LI G  + G+     ++  EM
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
               L P+  T+T++I+A C++  +    R LK+++     P    YN +++GFCK G +
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 412

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
             A++++  M      PD +T+ IL+ GHC  G++ +   + +     G  PD     S+
Sbjct: 413 KNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAK---GTVPDLGVYTSI 469

Query: 549 ISCLLK 554
           +  ++K
Sbjct: 470 VGEIVK 475



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 145/296 (48%), Gaps = 1/296 (0%)

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           +SR     +A  F+  +   G  P+   +N L+  L R+ E+A    +  E++ +     
Sbjct: 91  MSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG-VRR 149

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            VV++ ++ISG C+ G +D A  ++  M+  G+ P   T+  LI G  +VG +  A  + 
Sbjct: 150 TVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVF 209

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E+M   G  P+ V F+ LID +C+ G     L+L  EM+ + + P+  T+  ++N LC+ 
Sbjct: 210 EKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 269

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             L  A   + +++   L P    Y  +IDG+CK   +D A  I   M  +    D+VT+
Sbjct: 270 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 329

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           T LI G    GR  +A  +  +M+  G  PD+ T   +I    + G      R+++
Sbjct: 330 TALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 385



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 132/247 (53%)

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             +   P+   +  ++    +LG++  A  +++EM S G++ + V+FN +I G  + G++
Sbjct: 108 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDL 167

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             AE +  RM   G  PDV T+ +LI G CR G++     + ++M G+ + PN   FTIL
Sbjct: 168 DGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL 227

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+A CK+          ++++   + P    YN +++G C+A ++  A+ IV EM     
Sbjct: 228 IDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 287

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           +PD VT+T LI G+C +  +  A+ I   M+  G   D++T  +LIS L K G   +A R
Sbjct: 288 RPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAER 347

Query: 564 IMQRASE 570
           ++    E
Sbjct: 348 VLGEMME 354



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 50/109 (45%)

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           F  QL    L P+  ++N ++    + G +  A  +  EM+ +  +   V+F  +I G C
Sbjct: 103 FYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMC 162

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             G +  A ++  +M   G  PD  T  +LI  L + G   +A  + ++
Sbjct: 163 RAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEK 211


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 182/340 (53%), Gaps = 3/340 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L  L +     EA+ + +E  R    PD  ++N LI GL +  ++K+A     +M +
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            GC P+ VT  TL+ GLC+   +    ELL+ +K K  F  DVV Y ++ISG+C  G +D
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK-KKGFDADVVLYGTLISGFCNNGNLD 120

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +   +++EM   GI  + VT++ L+ G  ++G    A  +   M   G  PDVVT++ LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG C++G+    + L + M  K   P+  T+ +L++ LCKE  + DA + L+ +      
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRC-KPDKVTFTILIIGHCMKGRMVEAI 527
                YN ++ G C  G VDEA  +   M + + C +P+  TF +LI G C +GR+ +A+
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            I  KM++ G   + +T N L+   LK G   EA  + ++
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQ 340



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 212/454 (46%), Gaps = 38/454 (8%)

Query: 151 SLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           S++    +YN ++  LC+   L ++V ++ + M + G  PNS      +    + G+ D 
Sbjct: 28  SVSPDIVSYNTLINGLCKAKKLKEAVGLLLE-MEAAGCFPNSVTCTTLMDGLCKDGRMDE 86

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  LL   +         +Y +L++      N D    +F E        +  T++ L+ 
Sbjct: 87  AMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 146

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF- 328
           GL R+G+ K+A      M   G  PD+VTY  LI GLC+        +LL  +  K E  
Sbjct: 147 GLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 206

Query: 329 ---------------------------------SPDVVTYTSVISGYCKLGKMDKATGIY 355
                                              DVVTY +++ G C  GK+D+A  ++
Sbjct: 207 SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLF 266

Query: 356 NEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           N M  N   ++P+  TFN+LI G  K G +  A  +  +M+  G   ++VT++ L+ G  
Sbjct: 267 NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL 326

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G++ + ++L  ++      PN +T++ILI+  CK   LN A+    +++ + L P  F
Sbjct: 327 KAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALF 386

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN ++   CK G++++A  +  EM    C+PD ++F  +I G    G       +  KM
Sbjct: 387 DYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKM 446

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           + +G  PD +T ++LI+ L K G  +EA   ++R
Sbjct: 447 VEMGLRPDALTFSTLINRLSKLGELDEAKSALER 480



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 196/413 (47%), Gaps = 3/413 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++   C  G  D  + +FD M   G   N       V    R G+   A  +L+   
Sbjct: 106 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 165

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +      Y  L++ L K   A  A+ +         +P   T+N+L+ GL + G V 
Sbjct: 166 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 225

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--FSPDVVTYT 336
            AF+    M   G   D+VTYNTL+ GLC   +V    +L   + F +E    P+V T+ 
Sbjct: 226 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM-FDNENCLEPNVFTFN 284

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G CK G++ KA  I+ +M   G   + VT+N+L+ G  K G +  A  + +++L  
Sbjct: 285 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 344

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G++P+  T+S LIDG+C+   LN    L  EM+   L+P ++ +  L+ +LCKE  L  A
Sbjct: 345 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 404

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +   +++   +  P    +N +IDG  KAG+      +  +M E   +PD +TF+ LI  
Sbjct: 405 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 464

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
               G + EA S   +M+  G  PD +  +SL+  L   G   E   ++ + +
Sbjct: 465 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMA 517



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 187/425 (44%), Gaps = 71/425 (16%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           R G    A GL+ +     V+     YN+L+N L K     EAV +  E       P++ 
Sbjct: 10  RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSV 69

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T   L+ GL + G + +A E    M   G   D+V Y TLISG C    + RG EL  E+
Sbjct: 70  TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 129

Query: 323 KFKS----------------------------------EFSPDVVTYTSVISGYCKLGKM 348
             K                                      PDVVTYT +I G CK G+ 
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  + N M   G +PS VT+NVL+ G  K G ++ A  +   M+  G   DVVT+++L
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKN--LSPNVYTFTILINALCKENRLNDA----RRFLKQ 462
           + G C  G++++ LKL + M      L PNV+TF +LI  LCKE RL  A    R+ +K+
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309

Query: 463 ----------------LK----------WNDL-----VPKPFMYNPVIDGFCKAGNVDEA 491
                           LK          W  +     VP  F Y+ +IDGFCK   ++ A
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             +  EM      P    +  L+   C +G + +A S+F +M    C PD I+ N++I  
Sbjct: 370 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 429

Query: 552 LLKGG 556
            LK G
Sbjct: 430 TLKAG 434



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 155/279 (55%), Gaps = 1/279 (0%)

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N ++ GLCR   V     L++E+  KS  SPD+V+Y ++I+G CK  K+ +A G+  EM 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKS-VSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           + G  P++VT   L+DG  K G M  A  + E M   G+  DVV + +LI G+C NG L+
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +G +L DEM GK +S NV T++ L++ LC+  +  +A   L  +  + + P    Y  +I
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG CK G    A  ++  M EK  +P  VT+ +L+ G C +G +++A  I   M+  G  
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
            D +T N+L+  L   G  +EA ++     +++N   P+
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 279



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 188/395 (47%), Gaps = 5/395 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQ 216
           TY  ++  LC+ G       + + M   G  P++      +S   + G   DA K L   
Sbjct: 175 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQGLSRI 274
              G+       YN+L+  L  +   DEA+ +F   F   +  +P+ +TFN+LI GL + 
Sbjct: 235 IEKGK-KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 293

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + KA +    M   G   ++VTYN L+ G  +  ++    EL K+V     F P+  T
Sbjct: 294 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV-LDLGFVPNSFT 352

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G+CK+  ++ A G++ EM + G+ P+   +N L+    K G++  A+ + + M 
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +    PD+++F+++IDG  + G      +L  +M    L P+  TF+ LIN L K   L+
Sbjct: 413 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 472

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A+  L+++  +   P   +Y+ ++ G    G+  E   ++ +M  K    D+   + ++
Sbjct: 473 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 532

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
              C   + V+ + +     +       I+ N L+
Sbjct: 533 TCLCHSIQEVDVMELLPTFFQGTSEGASISCNELL 567



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 3/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC +G       V + M   G  P+       +    + G+   A  LL+  
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YN LL+ L K+    +A  + +       + D  T+N L++GL   G+V
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 259

Query: 278 KKAFEFFYDM-GSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +A + F  M  +  C  P++ T+N LI GLC+   + +  ++ +++  K     ++VTY
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKM-VKKGSCGNLVTY 318

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             ++ G  K GK+ +A  ++ ++   G  P++ T+++LIDGF K+  +  A+ +   M +
Sbjct: 319 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 378

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P +  +++L+   C+ G L Q   L  EM   N  P++ +F  +I+   K      
Sbjct: 379 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 438

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
            +    ++    L P    ++ +I+   K G +DEA   +  M      PD + +  L+ 
Sbjct: 439 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 498

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           G   KG   E I++ ++M   G   D   V+++++CL
Sbjct: 499 GLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 535



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 10/174 (5%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            LN +   YN +M SLC+ G  +  + +F  M +    P+       +   ++AG     
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 439

Query: 211 KGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K L  +      RP  +T ST     L+N L K    DEA    +        PD   ++
Sbjct: 440 KELQMKMVEMGLRPDALTFST-----LINRLSKLGELDEAKSALERMVASGFTPDALVYD 494

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
            L++GLS  G+  +     + M + G   D    +T+++ LC   +     ELL
Sbjct: 495 SLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 198/397 (49%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++  L + G  D    +++ M     +PN+ +    + S  + G+ +    +  + 
Sbjct: 479 TFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEM 538

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N+ ++ + K     +   +F+E       PD  +++ILI GL + G  
Sbjct: 539 IHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFA 598

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++ +E FY M   GC  D   YNT I G C+  +V + ++LL+E+K K    P VVTY S
Sbjct: 599 RETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR-QPTVVTYGS 657

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+ ++D+A  ++ E  S G++ + V ++ LIDGFGKVG +  A  + E ++  G
Sbjct: 658 VIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 717

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ L+D   +  ++N+ L     MK    +PN  T++ILIN LC+  + N A 
Sbjct: 718 LTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++   L P    Y  +I G  KAGN+ EA+ +    +     PD  ++  +I G 
Sbjct: 778 VFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGL 837

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
               R +EA  IF +    GC     T  +L+  L K
Sbjct: 838 SYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQK 874



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 221/471 (46%), Gaps = 46/471 (9%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           +LG     F  +      +  TYN+++  LC+ G  ++   V D M+  G  PN   +  
Sbjct: 388 RLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNI 447

Query: 197 FVSSCIRAGKCDAAKGLLSQFR-----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
            +    +A K D A  +          P EVT     + SL++ L KQ   D+A  ++++
Sbjct: 448 MIDRLCKAKKLDEACSIFEGMNHKICSPDEVT-----FCSLIDGLGKQGRVDDAYRLYEQ 502

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                  P+   +  LI+   + G  +   + F +M   GCSPD+   N  +  + +  E
Sbjct: 503 MLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGE 562

Query: 312 VARGHELLKEVKFKSEFSPDVVTYT----------------------------------- 336
             +G  L +E+K +  F PDV++Y+                                   
Sbjct: 563 TGKGRALFEEIKSRG-FIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYN 621

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           + I G+CK GK++KA  +  EM + G +P+ VT+  +IDG  K+  +  A  + E   S 
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   +VV +SSLIDG+ + G++++   + +E+  K L+PNVYT+  L++AL K   +N+A
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               + +K     P    Y+ +I+G C+    ++A V   EM+++  KP+ +T+T +I G
Sbjct: 742 LVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAG 801

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
               G + EA S+F +    G  PD  + N++I  L       EA++I + 
Sbjct: 802 LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 183/395 (46%), Gaps = 2/395 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D  + +   M   G  P++      + SCI++ K      L+   R  +   +   Y +L
Sbjct: 145 DYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTL 204

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           + AL     +D  + +F +   L  +     F  +I+  +R G +  A     +M S   
Sbjct: 205 IGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCL 264

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
             DIV YN  I    +  +V    +   E+K      PD VTYTS+I   CK  ++D+A 
Sbjct: 265 HADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHG-LLPDDVTYTSMIGVLCKGNRLDEAV 323

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            I+ +M      P A  +N +I G+G  G    A  + ER  + G +P V+ ++ ++   
Sbjct: 324 EIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCL 383

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            + G+L + L+  +EMK K+ +PN+ T+ +LI+ LCK   +  A +    +K   L P  
Sbjct: 384 GKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNV 442

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
              N +ID  CKA  +DEA  I   M  K C PD+VTF  LI G   +GR+ +A  ++ +
Sbjct: 443 MTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQ 502

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ML     P+ +   SLI    K G   +  +I + 
Sbjct: 503 MLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKE 537



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 191/451 (42%), Gaps = 35/451 (7%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +  V+R     G  D+   + D M+S+    +  +    +    +AGK D A    
Sbjct: 232 SVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFF 291

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +   +      Y S++  L K N  DEAV +F++  +  + P  + +N +I G    
Sbjct: 292 HEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSA 351

Query: 275 GEVKKAFEFFYDMGSFGCSPDIV----------------------------------TYN 300
           G+  +A+       + GC P ++                                  TYN
Sbjct: 352 GKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYN 411

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI  LC+  EV    ++   +K    F P+V+T   +I   CK  K+D+A  I+  MN 
Sbjct: 412 VLIDMLCKAGEVEAAFKVRDAMKEAGLF-PNVMTVNIMIDRLCKAKKLDEACSIFEGMNH 470

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
               P  VTF  LIDG GK G +  A  + E+ML    +P+ V ++SLI  + + G+   
Sbjct: 471 KICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKED 530

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
           G K+  EM  +  SP++      ++ + K       R   +++K    +P    Y+ +I 
Sbjct: 531 GHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIH 590

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G  KAG   E   +   M+E+ C  D   +   I G C  G++ +A  +  +M   G  P
Sbjct: 591 GLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQP 650

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +T  S+I  L K    +EA+ + + A  +
Sbjct: 651 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 197/448 (43%), Gaps = 37/448 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +F  Y  ++ +L  +   D +  +F  M+  G+  +  +    +    R G+ DAA  LL
Sbjct: 197 AFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLL 256

Query: 215 SQF--------------------RPGEVTMS---------------TFMYNSLLNALVKQ 239
            +                     + G+V M+                  Y S++  L K 
Sbjct: 257 DEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKG 316

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  DEAV +F++  +  + P  + +N +I G    G+  +A+       + GC P ++ Y
Sbjct: 317 NRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAY 376

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N +++ L +   +       +E+  K + +P++ TY  +I   CK G+++ A  + + M 
Sbjct: 377 NCILTCLGKKGRLGEALRTFEEM--KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMK 434

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G+ P+ +T N++ID   K   +  A  + E M      PD VTF SLIDG  + G+++
Sbjct: 435 EAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVD 494

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
              +L ++M   +  PN   +T LI +  K  R  D  +  K++      P   + N  +
Sbjct: 495 DAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYM 554

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D   KAG   +   +  E++ +   PD ++++ILI G    G   E   +F  M   GC 
Sbjct: 555 DCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV 614

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQR 567
            D    N+ I    K G  N+A+++++ 
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEE 642



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 153/299 (51%), Gaps = 1/299 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y++++  L + G       +F  M+  G + ++     F+    ++GK + A  LL + 
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEM 643

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      +   Y S+++ L K +  DEA  +F+E      + +   ++ LI G  ++G +
Sbjct: 644 KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRI 703

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+    ++   G +P++ T+N L+  L +  E+       + +K   + +P+ +TY+ 
Sbjct: 704 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK-NLKGTPNHITYSI 762

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C++ K +KA   + EM   G+KP+ +T+  +I G  K GN+  A  + ER  + G
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            +PD  +++++I+G   + +  +  K+ +E + K  + +  T   L++AL K+  L  A
Sbjct: 823 GVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 6/294 (2%)

Query: 281 FEFFY----DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           F++F     +M   G  P   T   LI    + N++  G +L++ ++ K +F P    YT
Sbjct: 144 FDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMR-KFKFRPAFSAYT 202

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I     + + D    ++++M   G + S   F  +I  F + G + +A  + + M S 
Sbjct: 203 TLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSN 262

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
               D+V ++  ID + + G+++   K   E+K   L P+  T+T +I  LCK NRL++A
Sbjct: 263 CLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEA 322

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +Q++ N  VP  + YN +I G+  AG  DEA  ++   + + C P  + +  ++  
Sbjct: 323 VEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTC 382

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              KGR+ EA+  F +M +   AP+  T N LI  L K G    AF++     E
Sbjct: 383 LGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKE 435



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 112/252 (44%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F P   T   +I    K  K+ +   +   M     +P+   +  LI     V       
Sbjct: 159 FGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIML 218

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +M   GY   V  F+++I  + R G+L+  L L DEMK   L  ++  + + I+  
Sbjct: 219 TLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCF 278

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            K  +++ A +F  ++K + L+P    Y  +I   CK   +DEA  I  +ME+ R  P  
Sbjct: 279 GKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +  +I+G+   G+  EA S+  +    GC P  I  N +++CL K G   EA R  + 
Sbjct: 339 YAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEE 398

Query: 568 ASEDQNLQLPSW 579
             +D    L ++
Sbjct: 399 MKKDAAPNLSTY 410


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 223/453 (49%), Gaps = 9/453 (1%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRS-LCEMGLHDSVQV 177
           EKL P    E IK +D    G    E     +  N    +Y   +RS L ++   D++ +
Sbjct: 114 EKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVANDRNLSYRERLRSGLVDIKADDAIDL 173

Query: 178 VFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
             D + S    P   +I+F    S+  +  + D    L  Q     +  + +  + ++N 
Sbjct: 174 FRDMIHSR---PLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINC 230

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
             +      A     +  +L  +P+T TF+ LI GL   G V +A E    M   G  PD
Sbjct: 231 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 290

Query: 296 IVTYNTLISGLCRVNEVARGHELL-KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           ++T NTL++GLC   + A    L+ K V++  +  P+ VTY  V++  CK G+   A  +
Sbjct: 291 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQ--PNAVTYGPVLNVMCKSGQTALAMEL 348

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
             +M    IK  AV ++++IDG  K G++ +A  +   M   G   +++T++ LI G+C 
Sbjct: 349 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 408

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G+ + G KL  +M  + ++PNV TF++LI++  KE +L +A    K++    + P    
Sbjct: 409 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 468

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y  +IDGFCK  ++D+AN +V  M  K C P+  TF ILI G+C   R+ + + +F KM 
Sbjct: 469 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             G   D +T N+LI    + G  N A  + Q 
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 561



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 200/410 (48%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N ++  LC  G      ++ D M   G  PN+      ++   ++G+   A  LL + 
Sbjct: 293 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 352

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    Y+ +++ L K  + D A  +F E        +  T+NILI G    G  
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               +   DM     +P++VT++ LI    +  ++    EL KE+  +   +PD +TYTS
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTS 471

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK   +DKA  + + M S G  P+  TFN+LI+G+ K   +     +  +M   G
Sbjct: 472 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + D VT+++LI G+C  G+LN   +L  EM  + + PN+ T+ IL++ LC       A 
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 591

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              ++++ + +     +YN +I G C A  VD+A  +   +  K  KP   T+ I+I G 
Sbjct: 592 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 651

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C KG + EA  +F KM   G APD  T N LI   L  G   ++ ++++ 
Sbjct: 652 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 174/352 (49%), Gaps = 41/352 (11%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  +T ST     L+N L  +    EA+ +      +  +PD  T N L+ GL   G+
Sbjct: 252 YEPNTITFST-----LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M  +GC P+ VTY  +++ +C+  + A   ELL++++ ++    D V Y+
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN-IKLDAVKYS 365

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGI--------------------------------- 363
            +I G CK G +D A  ++NEM   GI                                 
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425

Query: 364 --KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
              P+ VTF+VLID F K G +  AE + + M+  G  PD +T++SLIDG+C+   L++ 
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            ++ D M  K   PN+ TF ILIN  CK NR++D     +++    +V     YN +I G
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           FC+ G ++ A  +  EM  ++  P+ VT+ IL+ G C  G   +A+ IF K+
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 196/395 (49%), Gaps = 1/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  +C+ G       +   M       ++      +    + G  D A  L ++ 
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +   YN L+         D+   + ++  +    P+  TF++LI    + G++
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E   +M   G +PD +TY +LI G C+ N + + ++++ ++       P++ T+  
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNI 506

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  ++D    ++ +M+  G+    VT+N LI GF ++G +  A+ + + M+S  
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++VT+  L+DG C NG+  + L++ ++++   +  ++  + I+I+ +C  ++++DA 
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 626

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I G CK G + EA ++  +MEE    PD  T+ ILI  H
Sbjct: 627 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 686

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              G   +++ +  ++ R G + D  T+  +I  L
Sbjct: 687 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 35/172 (20%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LP V+ FS L     +  Q +  L LC +M+ K ++ N+YT +I+IN  C+  +L  A  
Sbjct: 183 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA-- 240

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
                                  F   G + +             +P+ +TF+ LI G C
Sbjct: 241 -----------------------FSAMGKIIKLGY----------EPNTITFSTLINGLC 267

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++GR+ EA+ + ++M+ +G  PD IT+N+L++ L   G   EA  ++ +  E
Sbjct: 268 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 319


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 216/423 (51%), Gaps = 1/423 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  +  S KTY+ +M +L +    ++V  +   M S G  PN       +    RAGK 
Sbjct: 219 VSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKI 278

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A G+L +            Y  L++AL      + A  +F +      +PD  T+  L
Sbjct: 279 DEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITL 338

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +   S  G++    EF+ +M + G  PD+VT+  LI  LC+V +V      L  +K K  
Sbjct: 339 LDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMK-KQG 397

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +P++ TY ++I G  +L ++D+A  ++N M S G++ +A T+ + ID +GK G    A 
Sbjct: 398 VAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAI 457

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              E+M + G +P++V  ++ +      G+L +  +  + +K   L+P+  T+ IL+   
Sbjct: 458 KTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCY 517

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            K  R++DA + L +++ N   P+  + N +ID   KA  VDEA  +   M+E +  P  
Sbjct: 518 GKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTV 577

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+  L+ G   +GR+ EA ++F  M+   C P+ I+ N+L+ CL K G  + A +++ R
Sbjct: 578 VTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFR 637

Query: 568 ASE 570
            +E
Sbjct: 638 MTE 640



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 189/357 (52%), Gaps = 4/357 (1%)

Query: 192  PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
            P+++F    C      DA    L   +   +T S   YNSL++ L+K    + A  +F +
Sbjct: 757  PLVKFL---CKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYK 813

Query: 252  YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                   PD +T+N+ +  L + G++K+ F+ + +M   GC P+ +T+N +I GL + N 
Sbjct: 814  MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873

Query: 312  VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
            + +  +L  ++    +FSP   TY  +I G  KLG++++A   + EM   G  P+   +N
Sbjct: 874  LDKAIDLYYDL-MSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN 932

Query: 372  VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            +L++GFGK G++ +A  +  RM+  G  PD+ ++S ++D  C  G+++  L   +E+K  
Sbjct: 933  ILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992

Query: 432  NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
             L P++  + ++IN L +  R+ +A     +++   + P  + YN +I     AG V+EA
Sbjct: 993  GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052

Query: 492  NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
              +  E++ K  +P+  T+  LI GH M G    A +++ KM+  GC P+  T   L
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 222/474 (46%), Gaps = 3/474 (0%)

Query: 99  VCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKT 158
           VC  ++RSS+      R     +S      V+K + +P     F         + H+ +T
Sbjct: 65  VCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTET 124

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDG-HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            N V+  L      + + VVF+ M+        +  +  F    IR G  +A   L  + 
Sbjct: 125 CNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVAL-EKM 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R     ++ + Y  L++ L+K     EA+ +++       +P   T++ L+  L +  ++
Sbjct: 184 RKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDI 243

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +       +M S G  P+I T+   I  L R  ++   + +LK +   +   PDVVTYT 
Sbjct: 244 ETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD-DAGCGPDVVTYTV 302

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C  GK++ A  ++ +M +   KP  VT+  L+D F   G++ + +     M + G
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           YLPDVVTF+ LID  C+ G++++     D MK + ++PN++T+  LI  L + NRL++A 
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                ++   L    + Y   ID + K+G   +A     +M+     P+ V     +   
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSL 482

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +GR+ EA   FN + + G APD IT N L+ C  K G  ++A +++    E+
Sbjct: 483 AEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEEN 536



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 205/453 (45%), Gaps = 35/453 (7%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           +L L  +  T+ + +R L   G  D    +   M   G  P+       + +   AGK +
Sbjct: 255 SLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLN 314

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            AK L  + +          Y +LL+      + D     + E       PD  TF ILI
Sbjct: 315 NAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILI 374

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV------ 322
             L ++G+V +AF     M   G +P++ TYNTLI GL R+N +    EL   +      
Sbjct: 375 DALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLE 434

Query: 323 ---------------------------KFKSE-FSPDVVTYTSVISGYCKLGKMDKATGI 354
                                      K K+    P++V   + +    + G++++A   
Sbjct: 435 TTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEF 494

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           +N +  CG+ P A+T+N+L+  +GK G +  A  +   M   G  P+VV  +SLID   +
Sbjct: 495 FNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYK 554

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
             ++++  K+   MK   L+P V T+  L+  L KE R+ +A    K +  +D  P    
Sbjct: 555 ADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTIS 614

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           +N ++D  CK G VD A  ++  M E  C PD +T+  +I G   + R+  A  +F++M 
Sbjct: 615 FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++   PD +T+ +L+  ++K G   +AFR+ + 
Sbjct: 675 KV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKE 706



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 176/337 (52%), Gaps = 2/337 (0%)

Query: 232  LLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            L+  L K   A +A  +F +  + +   P    +N LI GL +    + A+  FY M + 
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 291  GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
            GC+PD+ TYN  +  L +  ++    +L +E+ F+    P+ +T+  VI G  K   +DK
Sbjct: 818  GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRG-CKPNTITHNIVIFGLVKSNSLDK 876

Query: 351  ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
            A  +Y ++ S    P+  T+  LIDG  K+G +  A+   E ML +G +P+   ++ L++
Sbjct: 877  AIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMN 936

Query: 411  GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
            G+ + G +    +L   M  + + P++ +++I+++ LC   +++DA  + ++LK + L P
Sbjct: 937  GFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDP 996

Query: 471  KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
                YN +I+G  ++  V+EA  +  EM  +   PD  T+  LI+   + G + EA  ++
Sbjct: 997  DLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMY 1056

Query: 531  NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             ++   G  P+  T N+LI      G P+ A+ + ++
Sbjct: 1057 EELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKK 1093



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 188/456 (41%), Gaps = 39/456 (8%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  +L L  +  TY L +    + G        F+ M+++G +PN       + S    G
Sbjct: 427 SMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQG 486

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + + AK   +  +   +      YN L+    K    D+A+ +  E       P+    N
Sbjct: 487 RLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIIN 546

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI  L +   V +A++ F  M     +P +VTYNTL++GL +   V     L K +   
Sbjct: 547 SLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGM-IA 605

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
            +  P+ +++ +++   CK G++D A  +   M      P  +T+N +I G  K   +  
Sbjct: 606 DDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNY 665

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE-----------------M 428
           A ++  +M    Y PD VT  +L+ G  ++G++    ++  E                 M
Sbjct: 666 AFWLFHQMKKVIY-PDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLM 724

Query: 429 KGKNLSPNV-------------------YTFTILINALCKENRLNDARR-FLKQLKWNDL 468
            G  +   +                        L+  LCK  +  DA   FLK  K   +
Sbjct: 725 GGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCI 784

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +IDG  KA   + A  +  +M+   C PD  T+ + +      G++ E   
Sbjct: 785 TPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFD 844

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ++ +ML  GC P+ IT N +I  L+K    ++A  +
Sbjct: 845 LYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDL 880



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 140/288 (48%), Gaps = 1/288 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYNL + +L + G    +  +++ M   G  PN+      +   +++   D A  L    
Sbjct: 825  TYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDL 884

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              G+ + + + Y  L++ L+K    +EA   F+E       P+   +NIL+ G  + G+V
Sbjct: 885  MSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDV 944

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            + A E F  M   G  PD+ +Y+ ++  LC V +V       +E+K  S   PD+V Y  
Sbjct: 945  ETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL-SGLDPDLVCYNL 1003

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I+G  +  ++++A  +++EM + GI P   T+N LI   G  G +  A  M E +   G
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG 1063

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
              P+V T+++LI G+  +G  ++   +  +M      PN  TF  L N
Sbjct: 1064 LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 70/147 (47%)

Query: 156  FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             K+Y++++  LC +G  D     F+ ++  G  P+       ++   R+ + + A  L  
Sbjct: 963  LKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFD 1022

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            + R   +T   + YN+L+  L      +EA  M++E      +P+ +T+N LI+G S  G
Sbjct: 1023 EMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSG 1082

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTL 302
               +A+  +  M   GC P+  T+  L
Sbjct: 1083 NPDRAYAVYKKMMVGGCRPNTGTFAQL 1109


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 206/418 (49%), Gaps = 6/418 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++++LC+ G  D    +   M + G  P+       +SS  + G  D A+ L  +F
Sbjct: 181 TYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKF 240

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P        +YN+L++ + K+    EA  +  E       P+  +++ +I  LS +G V
Sbjct: 241 EP-----VVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNV 295

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + +   F  M   GC P++ T+ +LI G      V     L   +  +   SP+VV Y +
Sbjct: 296 ELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWN-LMIREGVSPNVVAYNT 354

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  G MD+A  ++N+M    I+P+  T++ +I GF K G++VSA     +M++ G
Sbjct: 355 LIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG 414

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV ++ ++D  C+    +Q   L D M      P V TF   I  LC+  R+  A 
Sbjct: 415 CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAM 474

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L Q++  + +P    YN ++DG  +A    EA  ++ E+EE++ + D VT+  ++ G 
Sbjct: 475 NVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGF 534

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
              G   + + +  KML  G   D ITVN+ ++   K G    A +++   S ++  +
Sbjct: 535 SFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFR 592



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 211/426 (49%), Gaps = 24/426 (5%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +  H+  TY  ++  L      D V  +   M+ + ++P S  +  FV  C R       
Sbjct: 69  TFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE-NVPCSQELFQFVIKCYRRSNL-GE 126

Query: 211 KGLLSQFRPGEVTM--STFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-------QPDT 261
           +GL   +R  E     S  +YN +L+AL+ QN       +FK    LY+       +P+ 
Sbjct: 127 QGLKMFYRIREFGCEPSVKIYNLVLDALLSQN-------LFKMINALYNNMKSEGLEPNV 179

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T+N+L++ L + G+V  A +   +M + GC PD V+Y T+IS +C++ +V +  EL   
Sbjct: 180 FTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL--- 236

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
                +F P V  Y ++I G CK  +  +A  + NEM   G+ P+ ++++ +I     +G
Sbjct: 237 ---AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMG 293

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           N+  +  +  RM   G  P+V TF+SLI G+   G++   + L + M  + +SPNV  + 
Sbjct: 294 NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYN 353

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ LC +  +++A     Q++ + + P    Y+ +I GF K+G++  A     +M   
Sbjct: 354 TLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C+P+ V +T ++   C      +A  + + M+  GC P  IT N+ I  L + G    A
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473

Query: 562 FRIMQR 567
             ++ +
Sbjct: 474 MNVLDQ 479



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 177/382 (46%), Gaps = 10/382 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ V+  L +MG  +    VF  M   G  PN       +      G+   A GL +  
Sbjct: 281 SYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM 340

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+ +   YN+L++ L    N DEA+ ++ +  +   +P+  T++ +I G ++ G++
Sbjct: 341 IREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDL 400

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E +  M + GC P++V Y  ++  LC+++   +  +L+  +       P V+T+ +
Sbjct: 401 VSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNM-ISDGCPPTVITFNN 459

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA----EYMRERM 393
            I G C+ G+++ A  + ++M      P+  T+N L+DG  +      A      + ER 
Sbjct: 460 FIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERK 519

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           + F    D VT+++++ G+  NG   Q L+L  +M    +  +  T    +NA CK  ++
Sbjct: 520 VEF----DCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKV 575

Query: 454 NDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
             A + L  +    +       +  ++ G C     +EA V + EM ++   P+  T+ +
Sbjct: 576 KTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNV 635

Query: 513 LIIGHCMKGRMVEAISIFNKML 534
           L+ G   K   +  I I + ++
Sbjct: 636 LVRGFFSKLGHMGPIRILDDII 657



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 165/344 (47%), Gaps = 48/344 (13%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDI-VTYNTLISGLCRVNEVARGHELLKEVKFK 325
           +++ L +  ++  + E+F  + + G      +TY T+I  L R NE+     LL+++K +
Sbjct: 44  VVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103

Query: 326 S-EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF--GKVGN 382
           +   S ++  +  VI  Y +    ++   ++  +   G +PS   +N+++D      +  
Sbjct: 104 NVPCSQELFQF--VIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFK 161

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M++A Y    M S G  P+V T++ L+   C+NG+++   KL  EM  K   P+  ++T 
Sbjct: 162 MINALY--NNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTT 219

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA----------------- 485
           +I+++CK   ++ AR     +K+  +VP   +YN +I G CK                  
Sbjct: 220 VISSMCKLGDVDKAREL--AMKFEPVVP---VYNALIHGVCKECRFKEAFDLMNEMVDRG 274

Query: 486 ------------------GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
                             GNV+ +  +   M  + C+P+  TFT LI G  ++GR+ +A+
Sbjct: 275 VDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAV 334

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            ++N M+R G +P+ +  N+LI  L   G  +EA  +  +  +D
Sbjct: 335 GLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKD 378



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 6/207 (2%)

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           N +N C +  S V     +    +  ++VS+ EY +    S  +    +T+ ++ID   R
Sbjct: 32  NSLNVCPVSESHV-----VKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGR 86

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           N +++    L  +MK +N+  +   F  +I    + N      +   +++     P   +
Sbjct: 87  NNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKI 146

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN V+D           N +   M+ +  +P+  T+ +L+   C  G++  A  +  +M 
Sbjct: 147 YNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMS 206

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEA 561
             GC PDD++  ++IS + K G  ++A
Sbjct: 207 NKGCDPDDVSYTTVISSMCKLGDVDKA 233


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 201/455 (44%), Gaps = 6/455 (1%)

Query: 122 SPLN--SLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF 179
           SPL   +L    RL  P L  + L   R    +  S +  N V+ +L         Q   
Sbjct: 135 SPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSR-SPSTLPQASL 193

Query: 180 DYMRSDGHL---PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
           D  RS   L   PN       V +    G    A   LS  +   ++     YN+LLNA 
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            ++    EA  +     R    P   T+N L+   +R+G +K+A +    M ++G  PD+
Sbjct: 254 CRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            TYN L  GLC+  +V     L  E++      PDVVTY +++    K      A  +  
Sbjct: 314 RTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLE 373

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EM   G+KP+ VT N+++    K G +  A    E++   G  PDV+T+++LID YC+ G
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG 433

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            + +   L DEM GK L  + +T   ++  LCK  R  DA   L        VP    Y 
Sbjct: 434 NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYG 493

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            V+  + K  N + A  +  +M E++  P   T+  LI G C   R+ EAI   N+ +  
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEK 553

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G  PD+ T N +I    K G    AFR   +  E+
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN 588



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 210/447 (46%), Gaps = 37/447 (8%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S + L L+ +  T+NL++ + C  G           M+  G  P++      +++  R G
Sbjct: 198 SLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKG 257

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
               A+ LL++ +   +  +   YN+L++A  +     +A  + +       +PD  T+N
Sbjct: 258 MLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYN 317

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCS-PDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +L  GL + G+V +AF    +M   G + PD+VTYNTL+    +    +    LL+E++ 
Sbjct: 318 VLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD 377

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    P +VT+  V+   CK GK+++A G   ++   G+ P  +T+N LID + K GN+ 
Sbjct: 378 KG-VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA 436

Query: 385 SAEYMRERML-----------------------------------SFGYLPDVVTFSSLI 409
            A  + + M+                                     G++PD V++ +++
Sbjct: 437 KAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVM 496

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
             Y +       L+L D+M  + L P++ T+  LI  LC+  RL +A   L +     LV
Sbjct: 497 AAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLV 556

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +I  +CK G+++ A     +M E   KPD VT   L+ G C+ G++ +A+ +
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGG 556
           F   +  G   D IT N+LI  + K G
Sbjct: 617 FESWVEKGKKVDVITYNTLIQSMCKVG 643



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 197/418 (47%), Gaps = 2/418 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +   +G       V + M + G  P+            +AGK D A  L  + 
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM 339

Query: 218 -RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G        YN+L++A  K   + +A+ + +E      +P   T NI+++ L + G+
Sbjct: 340 ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A      +   G +PD++TYNTLI   C+   VA+   L+ E+  K     D  T  
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG-LKMDTFTLN 458

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +V+   CK+ + + A  + +     G  P  V++  ++  + K  N   A  + ++M+  
Sbjct: 459 TVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER 518

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             +P + T+++LI G CR  +L + +   +E   K L P+  T+ I+I+A CKE  L +A
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENA 578

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            RF  ++  N   P     N +++G C  G +D+A  +     EK  K D +T+  LI  
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            C  G +  A+  F+ M   G  PD  T N ++S L + G   EA  ++ + ++   L
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKL 696



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 206/470 (43%), Gaps = 71/470 (15%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG-HLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            +TYN++   LC+ G  D    + D M   G  LP+       V +C +      A  LL
Sbjct: 313 LRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + R   V  +   +N ++ +L K+   +EA+   ++       PD  T+N LI    + 
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK----------EVKF 324
           G V KAF    +M   G   D  T NT++  LC++       ELL           EV +
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 325 KS-------EFSPD-----------------VVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            +       E++P+                 + TY ++I G C++ ++ +A    NE   
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVE 552

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+ P   T+N++I  + K G++ +A     +M+   + PDVVT ++L++G C +G+L++
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            LKL +    K    +V T+  LI ++CK   ++ A  F   ++   L P  F YN V+ 
Sbjct: 613 ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672

Query: 481 GFCKAGNVDEANVIV-------------------------AEMEEKRCKPDKV------- 508
              +AG  +EA+ ++                         A+++E   KP+         
Sbjct: 673 ALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQD 732

Query: 509 ----TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
               T+   + G C  G++ EA ++ ++M++ G   D  T  +L+  L+K
Sbjct: 733 NALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 143/331 (43%), Gaps = 37/331 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N V+ +LC+M  ++  + +       G +P+       +++  +    + A  L  Q 
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++  S   YN+L+  L +     EA+    E+      PD  T+NI+I    + G++
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF F   M      PD+VT NTL++GLC   ++ +  +L +    K +   DV+TY +
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK-KVDVITYNT 634

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK+G +D A   +++M   G++P A T+NV++    + G    A  M  ++   G
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694

Query: 398 YL-------------------------PD-----------VVTFSSLIDGYCRNGQLNQG 421
            L                         P+           + T+   ++G C  GQL + 
Sbjct: 695 KLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEA 754

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENR 452
             + DEM  K +  +  T+  L+  L K  +
Sbjct: 755 KAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 232/519 (44%), Gaps = 49/519 (9%)

Query: 86  NYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEF 145
           NY  S EF F+  V   + R         R L E +  L   +   +   P   + F   
Sbjct: 98  NYATSREFHFIHQVLDRMKRE-------GRVLTETIFIL-IFKACGKAHLPGEAVNFFHR 149

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHLPNSPMIEFFVSSCI 202
              +L    + K++N V+  + + G        + ++    S G  PN       + +  
Sbjct: 150 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 209

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G+ D A     +          F Y++L+N L K+   DEAV++  E       P+  
Sbjct: 210 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 269

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           TFN+LI  LS+ G++ +A +   +M   GC P+ VTYNTLI GLC   ++ +   LL+++
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329

Query: 323 KFKSEFSPDVVTY-----------------------------------TSVISGYCKLGK 347
              S+  P+ VTY                                   +S+ISG  K GK
Sbjct: 330 -VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGK 388

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            + A  ++ EM   G KP+ V +   IDG  +      AE + + MLS G+LP+  T+SS
Sbjct: 389 SENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 448

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+ G+ + G   + + +  EM  +++  NV   ++L+N LC+  RL +A      +    
Sbjct: 449 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 508

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPDKVTFTILIIGHCMKGRMVE 525
           L P    Y+ +I G C  G+VD+   +  EM  +E + +PD VT+ IL    C +  +  
Sbjct: 509 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTR 568

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           AI + N ML  GC PD +T N  +  L +   P +  R+
Sbjct: 569 AIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRL 607



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 175/392 (44%), Gaps = 59/392 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++ +L + G       + D M   G +PN       +      GK D A  LL + 
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   Y +++N LVKQ  A++ V++         + + + ++ LI GL + G+ 
Sbjct: 330 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 389

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A   + +M   GC P++V Y   I GLCR  +     ++L+E+  K  F P+  TY+S
Sbjct: 390 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG-FLPNAFTYSS 448

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+ K G   KA  ++ EM S  ++ + V  +VL++G  + G +  A  +   ML  G
Sbjct: 449 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 508

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS--PNVYTFTILINALCKEN---- 451
             PDVV +SS+I G C  G +++GLKL  EM+ +     P+V T+ IL NALC+++    
Sbjct: 509 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTR 568

Query: 452 -----------------------------RLN---DARRFLKQLK--------------- 464
                                        R+N   D R FL +L                
Sbjct: 569 AIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRI 628

Query: 465 -----WNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                   L P+P  ++ VI   CK   + E 
Sbjct: 629 VEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 149/291 (51%), Gaps = 3/291 (1%)

Query: 279 KAFEFFYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--KFKSEFSPDVVTY 335
           +A  FF+ M +   C   + ++N++++ + +  + +   +    V       F P+++TY
Sbjct: 142 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 201

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I   CKLG++D+A   + EM      P   T++ L++G  K   +  A ++ + M +
Sbjct: 202 NLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQA 261

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G LP+ VTF+ LID   +NG L++  KL D M  K   PN  T+  LI+ LC + +L+ 
Sbjct: 262 EGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 321

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L+++  +  VP    Y  +I+G  K    ++   I+  MEE+  K ++  ++ LI 
Sbjct: 322 ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 381

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           G   +G+   A+ ++ +M   GC P+ +   + I  L +   P+EA  I+Q
Sbjct: 382 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 144/281 (51%), Gaps = 11/281 (3%)

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD---KATG 353
            T+  LI       E    H++L  +K +      V+T T  I  +   GK     +A  
Sbjct: 90  ATFYRLIENYATSREFHFIHQVLDRMKREGR----VLTETIFILIFKACGKAHLPGEAVN 145

Query: 354 IYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML---SFGYLPDVVTFSSLI 409
            ++ M N    K +  +FN +++   + G+   A      +    S G+ P+++T++ +I
Sbjct: 146 FFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLII 205

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
              C+ GQ+++ +    EM  KN +P+V+T++ L+N LCKE R+++A   L +++    +
Sbjct: 206 KALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCL 265

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P P  +N +ID   K G++  A  +V  M  K C P++VT+  LI G C+KG++ +A+S+
Sbjct: 266 PNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSL 325

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             KM+   C P+ +T  ++I+ L+K     +   I+    E
Sbjct: 326 LEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 366



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 3/242 (1%)

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEM---NSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           V ++ SV++   + G    A   Y  +   NS G +P+ +T+N++I    K+G +  A  
Sbjct: 160 VKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 219

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
               M      PDV T+S+L++G C+  ++++ + L DEM+ +   PN  TF +LI+AL 
Sbjct: 220 TFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALS 279

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K   L+ A + +  +     VP    YN +I G C  G +D+A  ++ +M   +C P++V
Sbjct: 280 KNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQV 339

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+  +I G   + R  + + I   M   G   ++   +SLIS L K G    A R+ +  
Sbjct: 340 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 399

Query: 569 SE 570
           +E
Sbjct: 400 AE 401



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 39/221 (17%)

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVY--- 438
           +S +  + R     Y     TF  LI+ Y  + + +   ++ D MK  G+ L+  ++   
Sbjct: 71  ISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILI 130

Query: 439 -------------------------------TFTILINALCKENRLNDARRFLKQL---K 464
                                          +F  ++N + +E   + A +F   +    
Sbjct: 131 FKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGAN 190

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
                P    YN +I   CK G +D A     EM  K C PD  T++ L+ G C + R+ 
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           EA+ + ++M   GC P+ +T N LI  L K G  + A +++
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV 291


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 225/467 (48%), Gaps = 12/467 (2%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFS-RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
           ++L P   + +I R  N  L L+  E++ +   + +H++ TY+ ++  L    +   V++
Sbjct: 57  QRLYPKRLVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVEL 116

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           +     SD H       E    + IR    AGK D A     + +   V  S    N+LL
Sbjct: 117 LL----SDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLL 172

Query: 234 NALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           NA V+    D    MFK     Y   P+ +T NILI+ L +  +V+ A +   +M + G 
Sbjct: 173 NAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGM 232

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P++VTY T++ G     ++   +++  E+ F   + PD  TYT +++GYC+ G++  A 
Sbjct: 233 IPNVVTYTTILGGYSSRGDMVNANKVFGEL-FDRGWLPDATTYTILMNGYCEQGRLADAI 291

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            + ++M   G++P+ VT+ V+++ + K      A  + + ML   Y+P       +ID  
Sbjct: 292 KLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVL 351

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C  G++ +  +L   M  KN  P+    + LI+ LCKE ++ +AR+   + +    +P  
Sbjct: 352 CEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFE-RGAIPSL 410

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +I G C+ G + EA  +  +M EK  KP+  T+ +LI G    G   E I I  +
Sbjct: 411 LTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEE 470

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           ML   C P+  T   LI  L K GM  E  +++  A     +   SW
Sbjct: 471 MLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASGGVDSDSW 517


>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 712

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 228/469 (48%), Gaps = 33/469 (7%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEM-GLHDSVQVVF 179
           LS    L+ ++ +  P  GL+F ++   N   +H  +++ L++  L     L+ +   +F
Sbjct: 69  LSRTTVLQTLRLIKVPADGLRFFDWV-YNKGFSHKEQSFFLMLEFLGRARNLNAARNFLF 127

Query: 180 DY-MRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
               RS+G +    + + + +S IR    AG    +  L    +   ++ S   +NSLL+
Sbjct: 128 SIEKRSNGCVK---LQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLS 184

Query: 235 ALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
            L+K+     A  MF E  R Y   PD++TFN LI G  +   V +AF  F +M  + C+
Sbjct: 185 ILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCN 244

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLK-EVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           PD+VTYNT+I GLCR  +V   H LL   +K  +   P++V+YT+++ GYC   ++D+A 
Sbjct: 245 PDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEAL 304

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKV-------GNMVSAEYMRERMLSFGYLPDVVTF 405
            +++EM + G+KP+AVT+N LI G  +        G ++  +          + PD  TF
Sbjct: 305 LVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTT------FSPDACTF 358

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ--- 462
           + LI  +C  G L+  +K+  EM    L P+  ++++LI  LC  N  + A     +   
Sbjct: 359 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFE 418

Query: 463 ----LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               L  N+  P    YN + +  C  G   +A  +  ++  KR   D  ++  LI G C
Sbjct: 419 KEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQL-MKRGAQDPSSYRTLITGLC 477

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +G+   A  +   MLR    PD  T   LI  LLK G    A   +QR
Sbjct: 478 REGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQR 526



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 162/322 (50%), Gaps = 14/322 (4%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN LI+     G  +++   F  M   G SP ++T+N+L+S L +       H++  E++
Sbjct: 144 FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMR 203

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                +PD  T+ ++ISG+CK   +D+A  I+ EM      P  VT+N +IDG  + G +
Sbjct: 204 RTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKV 263

Query: 384 VSAEYMRERML--SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
             A  +   ML  +    P++V++++L+ GYC   ++++ L +  EM  + L PN  T+ 
Sbjct: 264 KIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYN 323

Query: 442 ILINALCKENRLNDARRFL-KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            LI  L + +R ++ + FL     +    P    +N +I   C AG++D A  +  EM  
Sbjct: 324 TLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 383

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR----IG---CAPDDITVNSLISCLL 553
            +  PD  ++++LI   C++    +A ++FN++      +G   C P     N +   L 
Sbjct: 384 MKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLC 443

Query: 554 KGGMPNEA---FR-IMQRASED 571
             G   +A   FR +M+R ++D
Sbjct: 444 ANGKAKQAEKVFRQLMKRGAQD 465



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 164/393 (41%), Gaps = 23/393 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
           +Y  ++R  C     D   +VF  M + G  PN+      +     A + D  KG L   
Sbjct: 286 SYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGG 345

Query: 215 ---SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
              + F P   T     +N L+ A     + D A+ +F+E   +   PD+ ++++LI+ L
Sbjct: 346 DAFTTFSPDACT-----FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 400

Query: 272 SRIGEVKKAFEFFYDM-------GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
               E  KA   F ++       G   C P    YN +   LC   +  +  ++ +++  
Sbjct: 401 CLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMK 460

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +    P   +Y ++I+G C+ GK   A  +   M      P   T+ VLIDG  K+G  +
Sbjct: 461 RGAQDPS--SYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEAL 518

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A    +RML   YLP   TF S++    +    N    L   M  K +  N+   T  +
Sbjct: 519 LAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAV 578

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
             +    +   A   ++ L  N  + K      ++D  C+   + +A+ +V    EK   
Sbjct: 579 RLVFSSAQKEKAFLIVRLLYDNGYLIK---MEELLDFLCENRKLLDAHTLVLFCLEKSQM 635

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            D  T   +I G C   R  EA S++N+++ +G
Sbjct: 636 VDIDTCNTIIEGLCKHKRHSEAFSLYNELVELG 668



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/329 (20%), Positives = 132/329 (40%), Gaps = 41/329 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++++ C+ G  D+   VF  M +    P+S      + +     + D A+ L ++ 
Sbjct: 357 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNEL 416

Query: 218 RPGEVTMS-------TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
              EV +           YN +   L     A +A  +F++  +  +Q D  ++  LI G
Sbjct: 417 FEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITG 475

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L R G+ K A+E    M      PD  TY  LI GL ++ E    H+ L+ +  +S + P
Sbjct: 476 LCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRM-LRSSYLP 534

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA----------------------- 367
              T+ SV++   K    + + G+   M    I+ +                        
Sbjct: 535 VATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIV 594

Query: 368 ---------VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                    +    L+D   +   ++ A  +    L    + D+ T +++I+G C++ + 
Sbjct: 595 RLLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRH 654

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINAL 447
           ++   L +E+        +    +L NAL
Sbjct: 655 SEAFSLYNELVELGNHQQLSCHVVLTNAL 683



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 97/244 (39%), Gaps = 20/244 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           +Y  ++  LC  G   +   +   M     +P+    E  +   ++ G+   A   L + 
Sbjct: 468 SYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRM 527

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEA----VYMFKEYFRLYSQPDTWTFNILIQGLS 272
            R   + ++T  ++S+L  LVK+  A+++      M ++  R      T    ++     
Sbjct: 528 LRSSYLPVAT-TFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSS-- 584

Query: 273 RIGEVKKAF---EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + +KAF      YD G       ++    L+  LC   ++   H L+     KS+  
Sbjct: 585 --AQKEKAFLIVRLLYDNGY------LIKMEELLDFLCENRKLLDAHTLVLFCLEKSQM- 635

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            D+ T  ++I G CK  +  +A  +YNE+   G         VL +     G     +++
Sbjct: 636 VDIDTCNTIIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLTNALEAAGKWEELQFV 695

Query: 390 RERM 393
            +RM
Sbjct: 696 SKRM 699


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 214/439 (48%), Gaps = 27/439 (6%)

Query: 156 FKTYNLVMRSLC------EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+++ S+C         L D  +  +  M + G + N   +  F      AGK + 
Sbjct: 366 YVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 425

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +         T  Y+ +LN L   +  + A  +F+E  R     D +T+ I++ 
Sbjct: 426 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 485

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A ++F +M   GC+P++VTY  LI    +  +V+  +EL  E        
Sbjct: 486 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCL 544

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK------------------PSAVTFN 371
           P++VTY+++I G+CK G+++KA  I+  M  CG K                  P+ VT+ 
Sbjct: 545 PNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYG 602

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L+DGF K   +  A  + + M   G  P+ + + +LIDG C+ G+L++  ++  EM   
Sbjct: 603 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 662

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                +YT++ LI+   K  R + A + L ++  N   P   +Y  +IDG CK G  DEA
Sbjct: 663 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 722

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++  MEEK C+P+ VT+T +I G  M G++   + +  +M   G AP+ +T   LI  
Sbjct: 723 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 782

Query: 552 LLKGGMPNEAFRIMQRASE 570
             K G  + A  +++   +
Sbjct: 783 CCKNGALDVAHNLLEEMKQ 801



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 200/488 (40%), Gaps = 96/488 (19%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LCE  L +      + MR+   LPN       +  C+   +    K +L+   
Sbjct: 264 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 323

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI---------- 268
                 S  ++NSL++A     +   A  + K+  +    P    +NILI          
Sbjct: 324 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 383

Query: 269 -------------------------------QGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                                          + L   G+ +KAF    +M   G  PD  
Sbjct: 384 NFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 443

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ +++ LC  +++     L +E+K +     DV TYT ++  +CK G +++A   +NE
Sbjct: 444 TYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 502

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VT+  LI  + K   +  A  + E MLS G LP++VT+S+LIDG+C+ GQ
Sbjct: 503 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 562

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  ++ + M G    P                   D   + KQ   N   P    Y  
Sbjct: 563 VEKACQIFERMCGSKDVP-------------------DVDMYFKQYDDNSERPNVVTYGA 603

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS--------- 528
           ++DGFCK+  V+EA  ++  M  + C+P+++ +  LI G C  G++ EA           
Sbjct: 604 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 663

Query: 529 --------------------------IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
                                     + +KML   CAP+ +    +I  L K G  +EA+
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 723

Query: 563 RIMQRASE 570
           ++MQ   E
Sbjct: 724 KLMQMMEE 731



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 207/488 (42%), Gaps = 86/488 (17%)

Query: 137 KLGLKFLEFSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K+ L FL F  +    L     TY +++ S C+ GL +  +  F+ MR  G  PN     
Sbjct: 457 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 516

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE---- 251
             + + ++A K   A  L           +   Y++L++   K    ++A  +F+     
Sbjct: 517 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 576

Query: 252 --------YFRLY----SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
                   YF+ Y     +P+  T+  L+ G  +   V++A +    M   GC P+ + Y
Sbjct: 577 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 636

Query: 300 NTLISGLCRVNEVARGHELLKEVK----------------------------------FK 325
           + LI GLC+V ++    E+  E+                                    +
Sbjct: 637 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 696

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +  +P+VV YT +I G CK+GK D+A  +   M   G +P+ VT+  +IDGFG +G + +
Sbjct: 697 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 756

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN-------------------------- 419
              + ERM S G  P+ VT+  LID  C+NG L+                          
Sbjct: 757 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 816

Query: 420 -------QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW--NDLVP 470
                  + L L DE+   + +P +  + +LI+ L K  RL  A R L+++      LV 
Sbjct: 817 GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 876

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               YN +I+  C A  V+ A  + +EM +K   P+  +F  LI G     ++ EA+ + 
Sbjct: 877 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936

Query: 531 NKMLRIGC 538
           + +  + C
Sbjct: 937 DFISHMVC 944



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 208/495 (42%), Gaps = 47/495 (9%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R   EKLS    +EV++ +  P   + F  ++   +   H+   YN    +L ++ + D 
Sbjct: 83  RQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYN----ALVDLIVRDD 138

Query: 175 VQVV----FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
            + V       +R D        +   V    R G    A   L + +      S   YN
Sbjct: 139 DEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 198

Query: 231 SLLNALVKQNNADEAVYMFKEY-----------FRLYSQ--------------------- 258
            L+ A +K +  D A  + +E             R ++                      
Sbjct: 199 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV 258

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PDT  +  LI GL      ++A +F   M +  C P++VTY+TL+ G     ++ R   +
Sbjct: 259 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 318

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +  +  + P    + S++  YC  G    A  +  +M  CG  P  V +N+LI    
Sbjct: 319 LNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 377

Query: 379 KVGNMVS------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
              + ++      AE     ML+ G + + +  SS     C  G+  +   +  EM G+ 
Sbjct: 378 GDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 437

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             P+  T++ ++N LC  +++  A    +++K   LV   + Y  ++D FCKAG +++A 
Sbjct: 438 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 497

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               EM E  C P+ VT+T LI  +    ++  A  +F  ML  GC P+ +T ++LI   
Sbjct: 498 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 557

Query: 553 LKGGMPNEAFRIMQR 567
            K G   +A +I +R
Sbjct: 558 CKAGQVEKACQIFER 572


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 232/519 (44%), Gaps = 49/519 (9%)

Query: 86  NYRCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEF 145
           NY  S EF F+  V   + R         R L E +  L   +   +   P   + F   
Sbjct: 74  NYATSREFHFIHQVLDRMKRE-------GRVLTETIFIL-IFKACGKAHLPGEAVNFFHR 125

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHLPNSPMIEFFVSSCI 202
              +L    + K++N V+  + + G        + ++    S G  PN       + +  
Sbjct: 126 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 185

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G+ D A     +          F Y++L+N L K+   DEAV++  E       P+  
Sbjct: 186 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 245

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           TFN+LI  LS+ G++ +A +   +M   GC P+ VTYNTLI GLC   ++ +   LL+++
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 305

Query: 323 KFKSEFSPDVVTY-----------------------------------TSVISGYCKLGK 347
              S+  P+ VTY                                   +S+ISG  K GK
Sbjct: 306 -VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGK 364

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            + A  ++ EM   G KP+ V +   IDG  +      AE + + MLS G+LP+  T+SS
Sbjct: 365 SENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 424

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+ G+ + G   + + +  EM  +++  NV   ++L+N LC+  RL +A      +    
Sbjct: 425 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 484

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPDKVTFTILIIGHCMKGRMVE 525
           L P    Y+ +I G C  G+VD+   +  EM  +E + +PD VT+ IL    C +  +  
Sbjct: 485 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTR 544

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           AI + N ML  GC PD +T N  +  L +   P +  R+
Sbjct: 545 AIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRL 583



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 175/392 (44%), Gaps = 59/392 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++ +L + G       + D M   G +PN       +      GK D A  LL + 
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 305

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   Y +++N LVKQ  A++ V++         + + + ++ LI GL + G+ 
Sbjct: 306 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 365

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A   + +M   GC P++V Y   I GLCR  +     ++L+E+  K  F P+  TY+S
Sbjct: 366 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKG-FLPNAFTYSS 424

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+ K G   KA  ++ EM S  ++ + V  +VL++G  + G +  A  +   ML  G
Sbjct: 425 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEG 484

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS--PNVYTFTILINALCKEN---- 451
             PDVV +SS+I G C  G +++GLKL  EM+ +     P+V T+ IL NALC+++    
Sbjct: 485 LKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTR 544

Query: 452 -----------------------------RLN---DARRFLKQLK--------------- 464
                                        R+N   D R FL +L                
Sbjct: 545 AIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRI 604

Query: 465 -----WNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                   L P+P  ++ VI   CK   + E 
Sbjct: 605 VEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 149/291 (51%), Gaps = 3/291 (1%)

Query: 279 KAFEFFYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--KFKSEFSPDVVTY 335
           +A  FF+ M +   C   + ++N++++ + +  + +   +    V       F P+++TY
Sbjct: 118 EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTY 177

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I   CKLG++D+A   + EM      P   T++ L++G  K   +  A ++ + M +
Sbjct: 178 NLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQA 237

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G LP+ VTF+ LID   +NG L++  KL D M  K   PN  T+  LI+ LC + +L+ 
Sbjct: 238 EGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 297

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L+++  +  VP    Y  +I+G  K    ++   I+  MEE+  K ++  ++ LI 
Sbjct: 298 ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 357

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           G   +G+   A+ ++ +M   GC P+ +   + I  L +   P+EA  I+Q
Sbjct: 358 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 144/281 (51%), Gaps = 11/281 (3%)

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD---KATG 353
            T+  LI       E    H++L  +K +      V+T T  I  +   GK     +A  
Sbjct: 66  ATFYRLIENYATSREFHFIHQVLDRMKREGR----VLTETIFILIFKACGKAHLPGEAVN 121

Query: 354 IYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML---SFGYLPDVVTFSSLI 409
            ++ M N    K +  +FN +++   + G+   A      +    S G+ P+++T++ +I
Sbjct: 122 FFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLII 181

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
              C+ GQ+++ +    EM  KN +P+V+T++ L+N LCKE R+++A   L +++    +
Sbjct: 182 KALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCL 241

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P P  +N +ID   K G++  A  +V  M  K C P++VT+  LI G C+KG++ +A+S+
Sbjct: 242 PNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSL 301

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             KM+   C P+ +T  ++I+ L+K     +   I+    E
Sbjct: 302 LEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 342



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 3/242 (1%)

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEM---NSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           V ++ SV++   + G    A   Y  +   NS G +P+ +T+N++I    K+G +  A  
Sbjct: 136 VKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVD 195

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
               M      PDV T+S+L++G C+  ++++ + L DEM+ +   PN  TF +LI+AL 
Sbjct: 196 TFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALS 255

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K   L+ A + +  +     VP    YN +I G C  G +D+A  ++ +M   +C P++V
Sbjct: 256 KNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQV 315

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+  +I G   + R  + + I   M   G   ++   +SLIS L K G    A R+ +  
Sbjct: 316 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 375

Query: 569 SE 570
           +E
Sbjct: 376 AE 377



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 39/221 (17%)

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVY--- 438
           +S +  + R     Y     TF  LI+ Y  + + +   ++ D MK  G+ L+  ++   
Sbjct: 47  ISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILI 106

Query: 439 -------------------------------TFTILINALCKENRLNDARRFLKQL---K 464
                                          +F  ++N + +E   + A +F   +    
Sbjct: 107 FKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGAN 166

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
                P    YN +I   CK G +D A     EM  K C PD  T++ L+ G C + R+ 
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           EA+ + ++M   GC P+ +T N LI  L K G  + A +++
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV 267


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 219/491 (44%), Gaps = 72/491 (14%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYN---------------------------- 160
           ++  + N +  + F  ++       H+  TYN                            
Sbjct: 63  ILHMVKNGESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELI 122

Query: 161 -------LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
                  +++R LC  G       +++ M   G  P     +F +++  ++G  + A   
Sbjct: 123 PDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELA--- 179

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L  F           +  L++ L +    DEA Y F+E  +  + P+ WT+ ++I GL +
Sbjct: 180 LRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEE-MKHTAIPNNWTYTVVINGLVK 238

Query: 274 IGEVK-------------------------------KAFEFFYDMGSFGCSPDIVTYNTL 302
            G+V                                KA+    DM   G   D +TYNTL
Sbjct: 239 AGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTL 298

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSC 361
           I G CR+ E+ R +ELL+E+K  ++F PD+ TY  +I+G C+  ++ +A  +   + N  
Sbjct: 299 IHGHCRLQEIDRAYELLEEMK-SNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNED 357

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
              P+ V++N LIDGF K   +  A  +   M++ G  PDVVT+S+LI G C  G+ ++ 
Sbjct: 358 DCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEA 417

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
               +EM GK + P V  ++ +I+ LC+   L+ A      +  N   P   +YN +I G
Sbjct: 418 HSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYG 477

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G + +A + V EM E+ C PD VT+  LI+G C   R  EA  ++ + L  G    
Sbjct: 478 LCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEIS 537

Query: 542 DITVNSLISCL 552
           + + N +I+ L
Sbjct: 538 ETSCNVVIASL 548



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 211/421 (50%), Gaps = 22/421 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++R LC  G       +++ M   G  P     +F +++  ++G  + A   L  F
Sbjct: 127 TYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELA---LRYF 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +  L++ L +    DEA Y F+E  +  + P+ WT+ ++I GL + G+V
Sbjct: 184 EKMSSIPCAATWTILIDGLFRAIRVDEACYYFEE-MKHTAIPNNWTYTVVINGLVKAGKV 242

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M      P +  Y ++I G C+  ++ + + LL+++K K  +  D +TY +
Sbjct: 243 AEAERVLQEMPV----PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKG-YQGDNLTYNT 297

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+L ++D+A  +  EM S    P   T+++LI G  +   +  A  +       G
Sbjct: 298 LIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDL------LG 351

Query: 398 YL-------PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            L       P+VV++++LIDG+ +  ++N   +L  EM      P+V T++ LI  LC  
Sbjct: 352 TLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNA 411

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R ++A  +L+++    ++PK  +Y+ VI G C+AG +D A+ +   M    C+P+   +
Sbjct: 412 GRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVY 471

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             LI G C  GR+ +A     +M   GC+PD +T  +LI  L +    +EA  +  R+ E
Sbjct: 472 NSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLE 531

Query: 571 D 571
            
Sbjct: 532 Q 532



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 220/501 (43%), Gaps = 78/501 (15%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           N +L L++ E     +S      T+ +++  L      D     F+ M+    +PN+   
Sbjct: 175 NLELALRYFE----KMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTA-IPNNWTY 229

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM-YNSLLNALVKQNNADEAVYMFKEYF 253
              ++  ++AGK   A+ +L      E+ + T   Y S++    K  +  +A ++ ++  
Sbjct: 230 TVVINGLVKAGKVAEAERVLQ-----EMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMK 284

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           R   Q D  T+N LI G  R+ E+ +A+E   +M S    PDI TY+ LI+GLCR   ++
Sbjct: 285 RKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLS 344

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              +LL  ++ + + +P+VV+Y ++I G+ K  +++ A  ++ EM + G  P  VT++ L
Sbjct: 345 EARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTL 404

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G    G    A    E M+    LP V  +SS+I G CR G+L+    + D M     
Sbjct: 405 IRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGC 464

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-- 491
            PN+  +  LI  LCK  RL DA+  +K++      P    Y  +I G C+    DEA  
Sbjct: 465 QPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACD 524

Query: 492 -----------------NVIVAEME----------------------------EKRCK-- 504
                            NV++A +                             E  CK  
Sbjct: 525 LYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKEN 584

Query: 505 ------------------PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
                             PD  T   L+   C + + V A++   +M+R+G  P   T +
Sbjct: 585 NLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYS 644

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
           +L++ L K G P+EA  +++R
Sbjct: 645 TLLNALFKAGKPSEAHVVLRR 665



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 178/373 (47%), Gaps = 45/373 (12%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +   YN    AL++    +EA  +FKE +     PD+ T+ ILI+GL   G++K A   +
Sbjct: 89  TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148

Query: 285 YDMGSFGCSPDIVTYNTLISGLC-----------------------------------RV 309
            +M   G  P ++T   L++ LC                                   RV
Sbjct: 149 EEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRV 208

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
           +E     E +K         P+  TYT VI+G  K GK+ +A  +  EM      P+   
Sbjct: 209 DEACYYFEEMKHTAI-----PNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLAN 259

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +  +I G  K G+M  A ++ E M   GY  D +T+++LI G+CR  ++++  +L +EMK
Sbjct: 260 YTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMK 319

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLK-WNDLVPKPFMYNPVIDGFCKAGNV 488
             +  P+++T+ ILI  LC+  RL++AR  L  L+  +D  P    YN +IDGF KA  V
Sbjct: 320 SNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARV 379

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           ++A  +  EM      PD VT++ LI G C  GR  EA S   +M+     P     +S+
Sbjct: 380 NDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSV 439

Query: 549 ISCLLKGGMPNEA 561
           IS L + G  + A
Sbjct: 440 ISGLCRAGELDAA 452



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 196/490 (40%), Gaps = 73/490 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C +   D    + + M+S+  +P+    +  ++   RA +   A+ LL   
Sbjct: 294 TYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTL 353

Query: 218 R-PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS---- 272
           R   + T +   YN+L++   K    ++A  +F E       PD  T++ LI+GL     
Sbjct: 354 RNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGR 413

Query: 273 -------------------------------RIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
                                          R GE+  A   F  M + GC P++  YN+
Sbjct: 414 ASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNS 473

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI GLC+   +      +KE+  +   SPD VTY ++I G C+  + D+A  +Y      
Sbjct: 474 LIYGLCKTGRLCDAKLRVKEMTERG-CSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQ 532

Query: 362 GIK--------------------------------PSAVTFNVLIDGFGKVGNMVSAEYM 389
           GI+                                P+A  +  +I+   K  N+  A  +
Sbjct: 533 GIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQL 592

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E M+  G  PD  T  +L+   CR  +    +   +EM      P+V T++ L+NAL K
Sbjct: 593 LEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFK 652

Query: 450 ENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
             + ++A   L++L       P    Y  +I  +     V+EA  ++ E++ K      V
Sbjct: 653 AGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIV 712

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            +  L+ G      +     +  +M R     ++ T N LI    + G  + A R++   
Sbjct: 713 AYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVL--- 769

Query: 569 SEDQNLQLPS 578
           SE + +  PS
Sbjct: 770 SEMKKVLTPS 779



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 119/238 (50%), Gaps = 1/238 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           + F Y +++ +L K+NN  EA  + ++      +PD  T + L+  + R  +   A  F 
Sbjct: 569 TAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFL 628

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G  P + TY+TL++ L +  + +  H +L+ +   +   PD + Y  +I+ Y  
Sbjct: 629 EEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSN 688

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
             ++++A  +  E+ S     S V +N L+ G  +  N+     +   M    ++ +  T
Sbjct: 689 QDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEAT 748

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           F+ LI G+CR GQ ++ +++  EMK K L+P+      L++ L +  R  +++  +K+
Sbjct: 749 FNILIQGFCRLGQTDRAVRVLSEMK-KVLTPSAAIIKFLVDELARAEREQESKDLVKR 805



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 46/95 (48%)

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN   +   + G  +EA  +  E   +   PD +T+ ILI G C  G++  A S++ +M+
Sbjct: 93  YNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMV 152

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
             G  P  +T   L++ L K G    A R  ++ S
Sbjct: 153 DRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMS 187


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 227/498 (45%), Gaps = 48/498 (9%)

Query: 115 RYLCEKLSPLNS------LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
           R+   +  PL +      L  ++   +P   L+ L  +          + Y  ++R L  
Sbjct: 27  RWRASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGA 86

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC---DAAKGLLSQFRP-GEVTM 224
           +G  D ++V+   MR +GH     ++  F+ S    G+    DA   +L+Q +P   +  
Sbjct: 87  VGALDLMKVLVAEMRREGHQVKLGVVHSFLDS--YEGQQLFDDAVDLILNQLQPLFGIQA 144

Query: 225 STFMYNSLLNALV-----------------------------------KQNNADEAVYMF 249
            T +YN LLN LV                                   + +    AV M 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           +E       PD  TF  L+QG    G ++ A      M   GCS   VT N LI+G C++
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             V      +++ +    F PD +TY + ++G C+   +  A  + + M   G  P   T
Sbjct: 265 GRVEDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N++++   K G +  A+ +  +M+  G LPD+ TF++LI   C   +L + L L  ++ 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K +SP+VYTF ILINALCK    + A R  +++K +   P    YN +ID  C  G + 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  ++ +ME   C    +T+  +I G C K R+ EA  +F++M   G + + IT N+LI
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 550 SCLLKGGMPNEAFRIMQR 567
             L K    ++AF ++ +
Sbjct: 504 DGLCKDKKIDDAFELINQ 521



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 47/449 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T+  +M+   E G  ++   V   M   G       +   ++   + G+ + A G + Q 
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P ++T     YN+ +N L + ++   A+ +     +    PD +T+NI++  L 
Sbjct: 278 IADGFEPDQIT-----YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G++++A      M   GC PDI T+NTLI+ LC  N +    +L ++V  K   SPDV
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG-VSPDV 391

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +I+  CK+G    A  ++ EM + G  P  VT+N LID    +G +  A  + + 
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G     +T++++IDG C+  ++ +  ++ D+M  + +S N  TF  LI+ LCK+ +
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA   + Q+    L P    YN ++  +CK G++ +A  I+  M     + D VT+  
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 513 LIIGHCMKGR-----------------------------------MVEAISIFNKMLRIG 537
           LI G C  GR                                   + +A+S+F +M  +G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 538 CAPDDITVNSLISCLLKGGMP-NEAFRIM 565
             PD +T   +   L +GG P  EAF  M
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFM 660



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 3/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++  L E      ++ V+  M + G  P+       + +  RA +   A  +L + 
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      + +L+   V++ + + A+ +      +       T N+LI G  ++G V
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL-LKEVKFKSEFSPDVVTYT 336
           + A  +     + G  PD +TYNT ++GLC+ + V  GH L + +V  +    PDV TY 
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV--GHALKVMDVMVQEGHDPDVFTYN 325

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            V++  CK G++++A GI N+M   G  P   TFN LI        +  A  +  ++   
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV TF+ LI+  C+ G  +  L+L +EMK    +P+  T+  LI+ LC   +L  A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              LK ++          YN +IDG CK   ++EA  +  +M+ +    + +TF  LI G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C   ++ +A  + N+M+  G  P++IT NS+++   K G   +A  I++
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 199/409 (48%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +M++LC      +  ++ + M S G  P+       +   +  G  +AA  + ++ 
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +    N L+N   K    ++A+   ++      +PD  T+N  + GL +   V
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   G  PD+ TYN +++ LC+  ++     +L ++  +    PD+ T+ +
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL-PDITTFNT 361

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C   ++++A  +  ++   G+ P   TFN+LI+   KVG+   A  + E M + G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+++LID  C  G+L + L L  +M+      +  T+  +I+ LCK+ R+ +A 
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q+    +      +N +IDG CK   +D+A  ++ +M  +  +P+ +T+  ++  +
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C +G + +A  I   M   G   D +T  +LI+ L K G    A ++++
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 590



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 119/242 (49%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              D V Y  +++   +  KM     +Y+EM + GIKP  VTFN L+    +   + +A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M E M S G  PD  TF++L+ G+   G +   L++   M     S    T  +LIN  
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  R+ DA  +++Q   +   P    YN  ++G C+  +V  A  ++  M ++   PD 
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+ I++   C  G++ EA  I N+M+  GC PD  T N+LI+ L  G    EA  + ++
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 568 AS 569
            +
Sbjct: 382 VT 383



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 16/216 (7%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P    +  +I   G VG +   + +   M   G+   +    S +D Y       +G +L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSY-------EGQQL 124

Query: 425 CDE---MKGKNLSP------NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            D+   +    L P      +   +  L+N L + +++        ++    + P    +
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N ++   C+A  V  A +++ EM  +   PD+ TFT L+ G   +G +  A+ +  +ML 
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +GC+   +TVN LI+   K G   +A   +Q+   D
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 221/456 (48%), Gaps = 23/456 (5%)

Query: 137 KLGLKFLEFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           ++G  F   +++ L L H     T+  ++R +C  G       +FD M  +G  P+    
Sbjct: 111 RVGFAFSVLAKI-LKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTY 169

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G   AA  LL          + F YN+++++L K     EA  +F E   
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT 229

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PD +T+N LI  L  + E K       +M      PD+V++NT++  LC+  +V  
Sbjct: 230 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            H+++ ++  +    P+VVTYT+++ G+C L +MD+A  +++ M   G  P+ +++N LI
Sbjct: 290 AHDVVDKM-IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 375 DGFGKVG-------------------NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +G+ K+                    NM  A  + + M+  G +P+V+++++LI+GYC+ 
Sbjct: 349 NGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 408

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            ++++ + L  EM  + L P+  T++ LI+ LC   RL DA     ++     +P    Y
Sbjct: 409 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 468

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
             ++D  CK   + EA  ++  +E     PD     I I G C  G +  A  +F+ +  
Sbjct: 469 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 528

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G  PD  T + +I+ L + G+ +EA ++ +   E+
Sbjct: 529 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN 564



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 207/435 (47%), Gaps = 21/435 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++ S+ +M  H ++  +   M S G  PN   +   ++S     +   A  +L++  
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                  T  + +L+  +  +    EA+++F +      +PD  T+  LI GL ++G   
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A      M    C P++  YNT+I  LC+  +V     L  E+  K   SPD+ TY S+
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG-ISPDIFTYNSL 242

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I   C L +      + NEM    I P  V+FN ++D   K G +  A  + ++M+  G 
Sbjct: 243 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR------ 452
            P+VVT+++L+DG+C   ++++ +K+ D M  K   PNV ++  LIN  CK  R      
Sbjct: 303 EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH 362

Query: 453 -------------LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
                        +++A +    +     +P    YN +I+G+CK   +D+A  +  EM 
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            +   PD VT++ LI G C   R+ +AI++F++M+     P+ +T   L+  L K     
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482

Query: 560 EAFRIMQRASEDQNL 574
           EA  ++ +A E  NL
Sbjct: 483 EAMALL-KAIEGSNL 496



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 169/311 (54%), Gaps = 1/311 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D A+  F    R+   P T  FN L+  ++++          + M SFG  P+I T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + LI+  C +N V     +L ++  K    PD  T+T++I G C  GK+ +A  ++++M 
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKI-LKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P  VT+  LI+G  KVGN  +A  +   M+     P+V  ++++ID  C++ Q+ 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L  EM  K +SP+++T+  LI+ALC           L ++  + ++P    +N V+
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G V EA+ +V +M ++  +P+ VT+T L+ GHC+   M EA+ +F+ M+  GC 
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 540 PDDITVNSLIS 550
           P+ I+ N+LI+
Sbjct: 339 PNVISYNTLIN 349



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 199/426 (46%), Gaps = 18/426 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ SLC+         +F  M + G  P+       + +     +      LL++  
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++      +N++++AL K+    EA  +  +  +   +P+  T+  L+ G   + E+ 
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG----------------HELLK-- 320
           +A + F  M   GC P++++YNTLI+G C++  + +                  E +K  
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVF 383

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           +        P+V++Y ++I+GYCK+ ++DKA  ++ EM    + P  VT++ LI G   V
Sbjct: 384 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 443

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             +  A  +   M++   +P++VT+  L+D  C+N  L + + L   ++G NL P++   
Sbjct: 444 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 503

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            I I+ +C+   L  AR     L    L P  + Y+ +I+G C+ G +DEA+ +  EM+E
Sbjct: 504 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 563

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
             C  +   +  +  G         AI +  +M+  G + D  T+   +  L   G+   
Sbjct: 564 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS 623

Query: 561 AFRIMQ 566
             +I++
Sbjct: 624 LKQILR 629



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 160/345 (46%), Gaps = 20/345 (5%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ST  +N LL ++ K  +    + +  +       P+ +T +ILI     +  V  AF   
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVL 119

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G  PD  T+ TLI G+C   ++     L  ++     F PDVVTY ++I+G CK
Sbjct: 120 AKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKM-IGEGFRPDVVTYGTLINGLCK 178

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +G    A  +   M     +P+   +N +ID   K   +  A  +   M++ G  PD+ T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++SLI   C   +      L +EM    + P+V +F  +++ALCKE ++ +A   + ++ 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR-- 522
              + P    Y  ++DG C    +DEA  +   M  K C P+ +++  LI G+C   R  
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 523 -----------------MVEAISIFNKMLRIGCAPDDITVNSLIS 550
                            M EA+ +F+ M+  GC P+ I+ N+LI+
Sbjct: 359 KAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLIN 403



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P  V +  +++   K+        + ++M+S GI P+  T ++LI+ F  +  +  A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++L  G+ PD  TF++LI G C  G++ + L L D+M G+   P+V T+  LIN LCK
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               + A R L  +   +  P  F YN +ID  CK   V EA  + +EM  K   PD  T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF----RIM 565
           +  LI   C         ++ N+M+     PD ++ N+++  L K G   EA     +++
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 566 QRASE 570
           QR  E
Sbjct: 299 QRGVE 303



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 98/205 (47%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A   +N M      PS V FN L+    K+ +  +   +  +M SFG  P++ T   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+ +C   ++     +  ++      P+  TFT LI  +C E ++ +A     ++    
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    Y  +I+G CK GN   A  ++  M +K C+P+   +  +I   C   ++ EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 528 SIFNKMLRIGCAPDDITVNSLISCL 552
           ++F++M+  G +PD  T NSLI  L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHAL 246



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 78/173 (45%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RML     P  V F+ L+    +    +  L L  +M    + PN+YT  ILIN+ C  N
Sbjct: 51  RMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+  A   L ++      P    +  +I G C  G + EA  +  +M  +  +PD VT+ 
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYG 170

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            LI G C  G    AI +   M++  C P+    N++I  L K     EAF +
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 206/418 (49%), Gaps = 10/418 (2%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L  S KT N V++ + EMGL +  + +FD M + G  PN       V      G C 
Sbjct: 160 NQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMV-----VGYCK 214

Query: 209 AAKGLLSQFRPGEVTMSTFMY-NSLLNALVKQ----NNADEAVYMFKEYFRLYSQPDTWT 263
               L S    G +    F+  N+ L+ +V++         A++ F+ +  +  +P+   
Sbjct: 215 LGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLIN 274

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           F  +I+GL + G VK+AFE   +M   G  P++ T+  LI GLC+     +   L  ++ 
Sbjct: 275 FTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 334

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P+V+TYT++ISGYC+  KM++A  + + M   G+ P+  T+  LIDG  K GN 
Sbjct: 335 RSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNF 394

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +   M   G+ P+V T+++++DG C+ G++ +  K+        L  +  T+TIL
Sbjct: 395 ERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTIL 454

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CK+  +  A     ++  + + P    Y  +I  FC+   + E+ +   E      
Sbjct: 455 ISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGL 514

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            P   T+T +I G+C +G +  A+  F++M   GCA D IT  +LIS L K    +EA
Sbjct: 515 VPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEA 572



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 213/442 (48%), Gaps = 14/442 (3%)

Query: 141 KFLEFSRVNLSL------NHSFKTYNLVM----RSLCEMG-LHDSVQVVFDYMRSDGHLP 189
           KF  F+R+ ++       N +F+  + VM    +S  E+G + +++++V + M + G  P
Sbjct: 107 KFRHFTRLYIACAASLISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIE-MHNQGLAP 165

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++  + + V      G  + A+ L  +     V  +   Y  ++    K  N  E+    
Sbjct: 166 STKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWL 225

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
                     D  T +++++     G V +A  +F      G  P+++ +  +I GLC+ 
Sbjct: 226 GGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKR 285

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPSAV 368
             V +  E+L+E+  +  + P+V T+T++I G CK G  +KA  ++ ++  S   KP+ +
Sbjct: 286 GSVKQAFEMLEEMVGRG-WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 344

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+  +I G+ +   M  AE +  RM   G  P+  T+++LIDG+C+ G   +  +L + M
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             +  SPNV T+  +++ LCK+ R+ +A + LK    N L      Y  +I   CK   +
Sbjct: 405 NEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEI 464

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            +A V+  +M +   +PD  ++T LI   C + RM E+   F + +R G  P + T  S+
Sbjct: 465 KQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSM 524

Query: 549 ISCLLKGGMPNEAFRIMQRASE 570
           I    + G    A +   R S+
Sbjct: 525 ICGYCREGNLRLALKFFHRMSD 546



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 2/362 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T +L++R  CE G        F      G  PN       +    + G    A  +L + 
Sbjct: 239 TLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEM 298

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
                  + + + +L++ L K+   ++A  +F +  R  + +P+  T+  +I G  R  +
Sbjct: 299 VGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEK 358

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A      M   G +P+  TY TLI G C+     R +EL+  V  +  FSP+V TY 
Sbjct: 359 MNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMN-VMNEEGFSPNVCTYN 417

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G CK G++ +A  +       G+    VT+ +LI    K   +  A  +  +M+  
Sbjct: 418 AIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKS 477

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD+ ++++LI  +CR  ++ +     +E     L P   T+T +I   C+E  L  A
Sbjct: 478 GIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLA 537

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +F  ++  +        Y  +I G CK   +DEA  +   M EK   P +VT   L   
Sbjct: 538 LKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYE 597

Query: 517 HC 518
           +C
Sbjct: 598 YC 599



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 196/444 (44%), Gaps = 29/444 (6%)

Query: 78  RPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCA-RYLCEKLSPLNSLEVIKRLDNP 136
           R F EK    R     W+ +  C + LR + ++ TC    LC++ S   + E+++ +   
Sbjct: 245 REFCEKGFVTR---ALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEM--- 298

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRSDGHLPNSPMIE 195
                      V      +  T+  ++  LC+ G  + + ++    +RS+ H PN     
Sbjct: 299 -----------VGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 347

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +S   R  K + A+ LLS+ +   +  +T  Y +L++   K  N + A  +       
Sbjct: 348 AMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEE 407

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P+  T+N ++ GL + G V++A++        G   D VTY  LIS  C+  E+ + 
Sbjct: 408 GFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQA 467

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             L  ++  KS   PD+ +YT++I+ +C+  +M ++   + E    G+ P+  T+  +I 
Sbjct: 468 LVLFNKM-VKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMIC 526

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G+ + GN+  A     RM   G   D +T+ +LI G C+  +L++   L D M  K L+P
Sbjct: 527 GYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTP 586

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLK---WNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
              T   L    CK +    A   L++L+   W   V      N ++   C    V  A 
Sbjct: 587 CEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTV------NTLVRKLCSERKVGMAA 640

Query: 493 VIVAEMEEKRCKPDKVTFTILIIG 516
           +   ++ +K    ++VT    +  
Sbjct: 641 LFFHKLLDKDPNVNRVTIAAFMTA 664



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 143/306 (46%), Gaps = 37/306 (12%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +++  + IG VK+A E   +M + G +P   T N ++                       
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVK---------------------- 175

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
                +VT         ++G ++ A  +++EM + G++P+ V++ V++ G+ K+GN++ +
Sbjct: 176 -----IVT---------EMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLES 221

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           +     M+  G++ D  T S ++  +C  G + + L          L PN+  FT +I  
Sbjct: 222 DRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEG 281

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-NVIVAEMEEKRCKP 505
           LCK   +  A   L+++      P  + +  +IDG CK G  ++A  + +  +  +  KP
Sbjct: 282 LCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKP 341

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + +T+T +I G+C   +M  A  + ++M   G AP+  T  +LI    K G    A+ +M
Sbjct: 342 NVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELM 401

Query: 566 QRASED 571
              +E+
Sbjct: 402 NVMNEE 407



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 89/201 (44%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           ++  F ++G +  A  M   M + G  P   T + ++      G +     L DEM  + 
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           + PN  ++ +++   CK   + ++ R+L  +     V      + ++  FC+ G V  A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                  E   +P+ + FT +I G C +G + +A  +  +M+  G  P+  T  +LI  L
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 553 LKGGMPNEAFRIMQRASEDQN 573
            K G   +AFR+  +    +N
Sbjct: 318 CKKGWTEKAFRLFLKLVRSEN 338


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 227/498 (45%), Gaps = 48/498 (9%)

Query: 115 RYLCEKLSPLNS------LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
           R+   +  PL +      L  ++   +P   L+ L  +          + Y  ++R L  
Sbjct: 27  RWRASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGA 86

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC---DAAKGLLSQFRP-GEVTM 224
           +G  D ++V+   MR +GH     ++  F+ S    G+    DA   +L+Q +P   +  
Sbjct: 87  VGALDLMKVLVAEMRREGHQVKLGVVHSFLDS--YEGQQLFDDAVDLILNQLQPLFGIQA 144

Query: 225 STFMYNSLLNALV-----------------------------------KQNNADEAVYMF 249
            T +YN LLN LV                                   + +    AV M 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           +E       PD  TF  L+QG    G ++ A      M   GCS   VT N LI+G C++
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             V      +++ +    F PD +TY + ++G C+   +  A  + + M   G  P   T
Sbjct: 265 GRVEDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N++++   K G +  A+ +  +M+  G LPD+ TF++LI   C   +L + L L  ++ 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K +SP+VYTF ILINALCK    + A R  +++K +   P    YN +ID  C  G + 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  ++ +ME   C    +T+  +I G C K R+ EA  +F++M   G + + IT N+LI
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 550 SCLLKGGMPNEAFRIMQR 567
             L K    ++AF ++ +
Sbjct: 504 DGLCKDKKIDDAFELINQ 521



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 47/449 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T+  +M+   E G  ++   V   M   G       +   ++   + G+ + A G + Q 
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P ++T     YN+ +N L + ++   A+ +     +    PD +T+NI++  L 
Sbjct: 278 IADGFEPDQIT-----YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G++++A      M   GC PDI T+NTLI+ LC  N +    +L ++V  K   SPDV
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG-VSPDV 391

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +I+  CK+G    A  ++ EM + G  P  VT+N LID    +G +  A  + + 
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G     +T++++IDG C+  ++ +  ++ D+M  + +S N  TF  LI+ LCK+ +
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA   + Q+    L P    YN ++  +CK G++ +A  I+  M     + D VT+  
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 513 LIIGHCMKGR-----------------------------------MVEAISIFNKMLRIG 537
           LI G C  GR                                   + +A+S+F +M  +G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 538 CAPDDITVNSLISCLLKGGMP-NEAFRIM 565
             PD +T   +   L +GG P  EAF  M
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFM 660



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 3/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++  L E      ++ V+  M + G  P+       + +  RA +   A  +L + 
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM 207

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      + +L+   V++ + + A+ +      +       T N+LI G  ++G V
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL-LKEVKFKSEFSPDVVTYT 336
           + A  +     + G  PD +TYNT ++GLC+ + V  GH L + +V  +    PDV TY 
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV--GHALKVMDVMVQEGHDPDVFTYN 325

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            V++  CK G++++A GI N+M   G  P   TFN LI        +  A  +  ++   
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV TF+ LI+  C+ G  +  L+L +EMK    +P+  T+  LI+ LC   +L  A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              LK ++          YN +IDG CK   ++EA  +  +M+ +    + +TF  LI G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C   ++ +A  + N+M+  G  P++IT NS+++   K G   +A  I++
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 199/409 (48%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +M++LC      +  ++ + M S G  P+       +   +  G  +AA  + ++ 
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +    N L+N   K    ++A+   ++      +PD  T+N  + GL +   V
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   G  PD+ TYN +++ LC+  ++     +L ++  +    PD+ T+ +
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL-PDITTFNT 361

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C   ++++A  +  ++   G+ P   TFN+LI+   KVG+   A  + E M + G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+++LID  C  G+L + L L  +M+      +  T+  +I+ LCK+ R+ +A 
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q+    +      +N +IDG CK   +D+A  ++ +M  +  +P+ +T+  ++  +
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 541

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C +G + +A  I   M   G   D +T  +LI+ L K G    A ++++
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 590



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 119/242 (49%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              D V Y  +++   +  KM     +Y+EM + GIKP  VTFN L+    +   + +A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M E M S G  PD  TF++L+ G+   G +   L++   M     S    T  +LIN  
Sbjct: 202 IMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  R+ DA  +++Q   +   P    YN  ++G C+  +V  A  ++  M ++   PD 
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+ I++   C  G++ EA  I N+M+  GC PD  T N+LI+ L  G    EA  + ++
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 568 AS 569
            +
Sbjct: 382 VT 383



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 16/216 (7%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P    +  +I   G VG +   + +   M   G+   +    S +D Y       +G +L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSY-------EGQQL 124

Query: 425 CDE---MKGKNLSP------NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            D+   +    L P      +   +  L+N L + +++        ++    + P    +
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N ++   C+A  V  A +++ EM  +   PD+ TFT L+ G   +G +  A+ +  +ML 
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +GC+   +TVN LI+   K G   +A   +Q+   D
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 203/449 (45%), Gaps = 4/449 (0%)

Query: 126 SLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD 185
           +L    RL  P L  + L   R    +  S +  N V+ +L       S Q   D   S 
Sbjct: 142 ALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALAR-SPSTSPQASLDAFHSL 200

Query: 186 GHL---PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
             L   PN       V +    G    A   LS+ +   ++     YN+LLNA  ++   
Sbjct: 201 IALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGML 260

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            EA  +     +    P   T+N L+   +R+G +K+A +    M +FG  PD+ TYN L
Sbjct: 261 GEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVL 320

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
            +GLC+  +V    +L  E++     SPDVVTY +++    K  +   A  +  EM   G
Sbjct: 321 AAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKG 380

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +K S VT N+++ G  + G +  A    E M   G  PDV+T+++LID  C+ G + +  
Sbjct: 381 VKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAF 440

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L DEM    L  + +T   L+  LCKE R  +A   L+       VP    Y  V+  +
Sbjct: 441 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAY 500

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K    + A  +  EM +++  P   T+  LI G    G++ EAI   N+++ +G  PDD
Sbjct: 501 FKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDD 560

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
            T N +I    K G   +AF+   +  E+
Sbjct: 561 TTYNIIIHAYCKEGDLEKAFQFHNKMVEN 589



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 214/454 (47%), Gaps = 37/454 (8%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S + L L+ +  T+NL++ + C  G           M+  G  P++      +++  R G
Sbjct: 199 SLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKG 258

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
               A+ LL++ +   +  +   YN+L++A  +     +A  + +       +PD WT+N
Sbjct: 259 MLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYN 318

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +L  GL + G+V +AF+   +M   G  SPD+VTYNTL+    +    +    LL+E++ 
Sbjct: 319 VLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMRE 378

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K   S  +VT+  ++ G C+ G++++A G    M   G+ P  +T+N LID   K GN+ 
Sbjct: 379 KGVKS-SLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVA 437

Query: 385 SAEYMRERML-----------------------------------SFGYLPDVVTFSSLI 409
            A  + + M+                                     G++PD V++ +++
Sbjct: 438 KAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVM 497

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
             Y +  +    L L DEM  + L+P++ T+  LI  L    +L +A   L +L    LV
Sbjct: 498 AAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLV 557

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +I  +CK G++++A     +M E   KPD VT   L+ G C+ GR+ +A+ +
Sbjct: 558 PDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKL 617

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           F   +  G   D IT N+LI  L K    + A R
Sbjct: 618 FESWVEKGKKVDVITYNTLIQALCKDNDVDTALR 651



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 202/468 (43%), Gaps = 71/468 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN++   LC+ G  D    + D M   G + P+       V +C +  +   A  LL +
Sbjct: 316 TYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEE 375

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   V  S   +N ++  L ++   +EA+   +        PD  T+N LI    + G 
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK----------EVKF-- 324
           V KAF    +M   G   D  T NTL+  LC+        ELL+          EV +  
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT 495

Query: 325 ----------------------KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                                 K + +P + TY ++I G   +GK+ +A    NE+   G
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P   T+N++I  + K G++  A     +M+   + PDVVT ++L++G C  G+L + +
Sbjct: 556 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM 615

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL +    K    +V T+  LI ALCK+N ++ A RF   ++   L P  F YN ++   
Sbjct: 616 KLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675

Query: 483 CKAGNVDEANVIVAEMEE--------------------KRCKPDKVTFTILIIGH----- 517
            +AG   EA  ++ ++ E                    +  K  +V   I  +G+     
Sbjct: 676 SEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDD 735

Query: 518 -----------CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
                      C+ G++ EA ++ ++M++ G + D+ T  +L+  L+K
Sbjct: 736 QESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 37/331 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N ++ +LC+   ++  + +       G +P+       +++  +  K + A  L  + 
Sbjct: 457 TLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM 516

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++T S   YN+L+  L       EA+    E   +   PD  T+NI+I    + G++
Sbjct: 517 IKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDL 576

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KAF+F   M      PD+VT NTL++GLC    + +  +L +    K +   DV+TY +
Sbjct: 577 EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGK-KVDVITYNT 635

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK   +D A   + +M   G++P   T+NVL+    + G  V A+ M  ++   G
Sbjct: 636 LIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695

Query: 398 YL---------------------PDVVT---------------FSSLIDGYCRNGQLNQG 421
            L                     P+V +               ++  I   C  GQL + 
Sbjct: 696 KLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEA 755

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENR 452
             + DEM  K +S +  T+  L+  L K  +
Sbjct: 756 KAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 199/375 (53%), Gaps = 5/375 (1%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           +++  +S     G  D A   L++ R   V  +T   N +L  L +         + +  
Sbjct: 136 VVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG----LVRRL 191

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
           F L   P+ +TFNI+I  L + GE+ +A   F  M + GCSPD+VTYN+LI G  +  ++
Sbjct: 192 FDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDL 251

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               +L+ E++ KS  + DVVTY ++I+ + K G+M+KA   + EM   G+  + VTF+ 
Sbjct: 252 EEVEQLVSEMR-KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFST 310

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
            +D F K G +  A  +  +M   G +P+  T++SL+DG C+ G+L+  + L DEM  + 
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 370

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L PNV T+T++++ LCKE ++ +A   L  ++   +     +Y  +I G     N + A 
Sbjct: 371 LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERAL 430

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++ +M+ K  + D   +  LI G C   ++ EA S+ +KM   G  P+ +   +++  L
Sbjct: 431 DLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDAL 490

Query: 553 LKGGMPNEAFRIMQR 567
            K G  +EA  ++ +
Sbjct: 491 FKAGKESEAVALLHK 505



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 8/421 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  +     F  M+  G + N      FV +  + G    A  L +Q 
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + F Y SL++   K    D+A+ +  E       P+  T+ +++ GL + G+V
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G   + + Y TLI G    N   R  +LL ++K K     DV  Y +
Sbjct: 392 AEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG-MELDVSLYGT 450

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  K+D+A  + ++M  CG++P+ V +  ++D   K G    A  +  ++L  G
Sbjct: 451 LIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSG 510

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P+VVT+ +LIDG C+ G +++ +   ++M+   L PNV  +T LI+  CK   LN A 
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++    +     +Y  +IDG+ K  N+ +A  +  +M E   + D   +T  I G 
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF 630

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG-------MPNEAFRIMQRASE 570
           C    M EA  + ++M+  G  PD    N LI    K G       + NE   ++   +E
Sbjct: 631 CNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESVLSSCTE 690

Query: 571 D 571
           D
Sbjct: 691 D 691



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 190/378 (50%), Gaps = 1/378 (0%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           +PN       +    + G+   A+ L  + +    +     YNSL++   K  + +E   
Sbjct: 197 VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQ 256

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +  E  +     D  T+N LI   S+ G ++KA+ +F +M   G   ++VT++T +   C
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +   V    +L  +++ +    P+  TYTS++ G CK G++D A  + +EM   G+ P+ 
Sbjct: 317 KEGLVQEAMKLFAQMRVRG-MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           VT+ V++DG  K G +  A+ +   M   G   + + +++LI G+  N    + L L ++
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           MK K +  +V  +  LI  LCK+ ++++A+  L ++    L P   +Y  ++D   KAG 
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             EA  ++ ++ +   +P+ VT+  LI G C  G + EAIS FNKM  +G  P+     +
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555

Query: 548 LISCLLKGGMPNEAFRIM 565
           LI    K G  N+A  +M
Sbjct: 556 LIDGFCKIGSLNKAMHLM 573



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 202/445 (45%), Gaps = 22/445 (4%)

Query: 56  SRVRASTIAA-IAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCA 114
           S +R S  AA +  ++ L N  S+ F   E  Y    E     VV  ++  S+++   C 
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSK-FGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
             L ++                   +K     RV   + + F TY  ++   C+ G  D 
Sbjct: 318 EGLVQE------------------AMKLFAQMRVRGMMPNEF-TYTSLVDGTCKAGRLDD 358

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
             V+ D M   G +PN       V    + GK   A  +LS    G V  +  +Y +L++
Sbjct: 359 AIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIH 418

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
                NN++ A+ +  +      + D   +  LI GL +  +V +A    + M   G  P
Sbjct: 419 GHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRP 478

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + V Y T++  L +  + +    LL ++   S F P+VVTY ++I G CK G + +A   
Sbjct: 479 NTVIYTTIMDALFKAGKESEAVALLHKI-LDSGFQPNVVTYCALIDGLCKAGSISEAISH 537

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           +N+M   G+ P+   +  LIDGF K+G++  A ++   M+  G   D V ++SLIDGY +
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
              L     L  +M    L  ++Y +T  I+  C  N + +AR  L ++    + P   +
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657

Query: 475 YNPVIDGFCKAGNVDEANVIVAEME 499
           YN +I  + K GN++EA+ +  EME
Sbjct: 658 YNCLIRKYQKLGNMEEASSLQNEME 682



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 200/422 (47%), Gaps = 2/422 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+V+  LC+ G     + +F  M++ G  P+       +    + G  +  + L+S+ 
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN+L+N   K    ++A   F E  R     +  TF+  +    + G V
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLV 321

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F  M   G  P+  TY +L+ G C+   +     LL E+  +    P+VVTYT 
Sbjct: 322 QEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG-LVPNVVTYTV 380

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK GK+ +A  + + M   G+K + + +  LI G     N   A  +  +M + G
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              DV  + +LI G C++ ++++   L  +M G  L PN   +T +++AL K  + ++A 
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++  +   P    Y  +IDG CKAG++ EA     +M E    P+   +T LI G 
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           C  G + +A+ + N+M+  G + D +   SLI   +K     +AF +  +  E   LQL 
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIE-SGLQLD 619

Query: 578 SW 579
            +
Sbjct: 620 LY 621



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 179/387 (46%), Gaps = 3/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++  + + C+ GL      +F  MR  G +PN       V    +AG+ D A  LL + 
Sbjct: 307 TFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 366

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y  +++ L K+    EA  +     R   + +   +  LI G       
Sbjct: 367 VHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNS 426

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M + G   D+  Y TLI GLC+  +V     LL ++       P+ V YT+
Sbjct: 427 ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA-GCGLRPNTVIYTT 485

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++    K GK  +A  + +++   G +P+ VT+  LIDG  K G++  A     +M   G
Sbjct: 486 IMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELG 545

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V  +++LIDG+C+ G LN+ + L +EM  K +S +   +T LI+   K+  L DA 
Sbjct: 546 LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF 605

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  + L    + Y   I GFC    + EA  +++EM      PDK  +  LI  +
Sbjct: 606 ALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKY 665

Query: 518 CMKGRMVEAISIFNKMLRI--GCAPDD 542
              G M EA S+ N+M  +   C  DD
Sbjct: 666 QKLGNMEEASSLQNEMESVLSSCTEDD 692


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 205/402 (50%), Gaps = 5/402 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + V++ LC+ G  DS   + + M   G+ P+       ++   +A K   A+  L   
Sbjct: 376 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 435

Query: 218 --RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRI 274
             +    + S F YNSLLN+L K     +A  +F       S  PD  +++ILI G  +I
Sbjct: 436 DRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKI 495

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            E+ +A + +  M    C P++ TYN  ++GL R   +A    + +E+   +  SPDV+T
Sbjct: 496 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM-VAAGCSPDVIT 554

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+++I G+    K D+A  ++  M S G +P+AVT+N L+ G  K      A  +  +M+
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD VT+++L+ G+C  G++ Q +++ DEM  K   P+V  +  L+    +  +  
Sbjct: 615 ERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 674

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTIL 513
           +A++  + +      P    +N +IDG  KA  +D+A  +   ME+   C PD VT+  L
Sbjct: 675 EAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 734

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           I G C + R+ EA+ +F ++ R+  +PD    N L+  +  G
Sbjct: 735 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCG 776



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 205/419 (48%), Gaps = 7/419 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS--DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            +   +  LC+ G    ++  F+  R+  +    + P+ +  +   I +G+ D A+    
Sbjct: 307 AWTAFLSGLCKSG---KIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACL 363

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  S+   +S++  L K    D A+ + +   +    PD  T ++LI  L +  
Sbjct: 364 EIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD 423

Query: 276 EVKKAFEFFYDMGS--FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           ++++A EF   M       S    +YN+L++ LC+  +V +   +   +  +  F PDVV
Sbjct: 424 KIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y+ +I G+CK+ ++ +A  +Y +M      P+  T+N  ++G  + G +  A+ + E M
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 543

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           ++ G  PDV+T+S+LI G+    + +Q  +L + M  +   PN  T+  L++ LCKE++ 
Sbjct: 544 VAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKP 603

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A    +++      P    Y  ++ GFC  G +++A  +  EM  K   PD V +  L
Sbjct: 604 DEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           + G    G+  EA  +F  M+   C PD ++ N +I  L K    ++A  + +R  +D 
Sbjct: 664 LKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 722



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 202/420 (48%), Gaps = 5/420 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           SL+ S   Y++++R L E G  D  +     +      P+S      +    +AG+ D+A
Sbjct: 334 SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSA 393

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR--LYSQPDTWTFNILI 268
             LL              ++ L+N L K +   EA    +   R         +++N L+
Sbjct: 394 LSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLL 453

Query: 269 QGLSRIGEVKKAFEFFYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
             L +  +V +AF  F  M S     PD+V+Y+ LI G C+++E+ R  +L K++     
Sbjct: 454 NSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM-IDLN 512

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+V TY + ++G  + G++  A G+Y EM + G  P  +T++ LI GF        A 
Sbjct: 513 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAH 572

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E M+S G  P+ VT++ L+ G C+  + ++  +L  +M  +   P+  T+T L+   
Sbjct: 573 ELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGF 632

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C   ++  A     ++      P    YN ++ GF +AG   EA  +   M  ++CKPD 
Sbjct: 633 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDT 692

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           V+  I+I G     R+ +A+ +F +M +  GC+PD +T NSLI  L      +EA ++ +
Sbjct: 693 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFK 752



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/514 (22%), Positives = 198/514 (38%), Gaps = 73/514 (14%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           VIK L +    L F  + +   +  H   TYN ++  L           VF+ M + G +
Sbjct: 103 VIKHLRDGGEALTFFRWLQAR-NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVV 161

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       V S       D A     +        S+ +Y  +   L       E   +
Sbjct: 162 PNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRV 221

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F          +      L+       +  +A + F  M   GC PD   Y+ ++   C+
Sbjct: 222 FGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCK 281

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK--------------------- 347
           +  +    +L  E+  +S+   + V +T+ +SG CK GK                     
Sbjct: 282 LENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPV 341

Query: 348 -------------MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
                        +DKA     E+    I+PS+ T + +I    K G + SA  + E M+
Sbjct: 342 YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMI 401

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLN------QGL-------------------KLCDEMK 429
             GY PD+ T S LI+  C+  ++       QG+                    LC   K
Sbjct: 402 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461

Query: 430 -------------GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
                         ++  P+V +++ILI+  CK + L  A +  KQ+   + VP    YN
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
             ++G  + G + +A  +  EM    C PD +T++ LI G  +  +  +A  +F  M+  
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           GC P+ +T N L+  L K   P+EA  + ++  E
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 615



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 47/306 (15%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           ++L+   +  TYN  +  L   G     Q V++ M + G  P+       +     A K 
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 208 DAAKGLLSQF-----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           D A  L         RP  VT     YN LL+ L K++  DEA  +F++       PD  
Sbjct: 569 DQAHELFETMISRGCRPNAVT-----YNCLLHGLCKESKPDEAHELFRKMVERGCDPDRV 623

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+  L+ G   +G++++A E F +M S G  PD+V YN L+ G  R  +     +L  +V
Sbjct: 624 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLF-QV 682

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVG 381
               +  PD V++  +I G  K  ++D A  ++  M    G  P  VT+N          
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN---------- 732

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
                                    SLI G C   +L++ +K+  E+    LSP+ + F 
Sbjct: 733 -------------------------SLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFN 767

Query: 442 ILINAL 447
           +L+ A+
Sbjct: 768 VLLEAI 773



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 54/129 (41%)

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A  F + L+  +     F YN ++D   +  ++ +A  +  +M  +   P+  T+ +L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
              C +    EA+  F +M+  G  P       +  CL   G   E  R+  R  E +  
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 575 QLPSWKKAV 583
                KKA+
Sbjct: 232 VEMMLKKAL 240


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 209/437 (47%), Gaps = 8/437 (1%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM-RSDGHLPNSPMI 194
           P   L  L+      +++ SF++YN V+ +      H  V  ++  M   D   P +   
Sbjct: 116 PGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTF 175

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
                +  R G+ D A  +L           T +Y ++++AL  Q   +EA  +  E F 
Sbjct: 176 SIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFL 235

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           +    D  TFN ++ GL  +G +++A      M   GC P+ +TY  L+ GLC  ++V  
Sbjct: 236 MGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEE 295

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKL-GKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              +L  V        +VV + +VI G C L GK+ +A  +Y  M S G  P A T+++L
Sbjct: 296 ARTMLGRVP-----ELNVVLFNTVI-GRCLLDGKLKEAAELYETMGSKGCPPDAHTYSIL 349

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G  K+G + SA  +   M   G+ P +VT++ L+  +CRNG  +    + + M  K L
Sbjct: 350 IHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGL 409

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           S N+  +  +I A+CK+ R++DA RF++++K     P    YN +I   C    ++EA  
Sbjct: 410 SMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEY 469

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +   +  +    + +T+  LI      G   +AIS+ N M+  GC+ D ++ N LI  L 
Sbjct: 470 LFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALC 529

Query: 554 KGGMPNEAFRIMQRASE 570
           + G  + +  ++   +E
Sbjct: 530 RDGNVDRSIMLLSEMAE 546



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 190/411 (46%), Gaps = 5/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC +G       + D M   G +PN+    F +     A + + A+ +L + 
Sbjct: 244 TFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRV 303

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++  ++N+++   +      EA  +++        PD  T++ILI GL ++G +
Sbjct: 304 P----ELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRL 359

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   +M   G +P IVTY  L+   CR N +      + EV      S ++  Y  
Sbjct: 360 GSAMKLLREMEDKGFAPSIVTYTILLHSFCR-NGMWDNIRAMLEVMSDKGLSMNLEGYNG 418

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK  +MD A     EM S G KP   T+N +I        M  AEY+ E +L  G
Sbjct: 419 MICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEG 478

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + +T+++LI    RNG     + L ++M     S ++ ++  LI ALC++  ++ + 
Sbjct: 479 VVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSI 538

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++    + P    YN +I   CK   V +A  +  EM  +   PD VT+  LI G 
Sbjct: 539 MLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGL 598

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           C  G M  A+++  K+       D IT N LIS   K  + ++A  ++ RA
Sbjct: 599 CKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRA 649



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 161/328 (49%), Gaps = 1/328 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            TY++++  LC++G   S   +   M   G  P+       + S  R G  D  + +L  
Sbjct: 344 HTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEV 403

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                ++M+   YN ++ A+ K    D+A+   +E      +PD  T+N +I  L    +
Sbjct: 404 MSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQ 463

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A   F ++   G   + +TYNTLI  L R         L  ++      S D+V+Y 
Sbjct: 464 MEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHG-CSLDIVSYN 522

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I   C+ G +D++  + +EM   GIKP+ V++N+LI    K   +  A  + + ML+ 
Sbjct: 523 GLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQ 582

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD+VT+++LI+G C+ G ++  L L +++  +++  ++ T+ ILI+  CK   L+DA
Sbjct: 583 ELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDA 642

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
              L +   + + P    +  ++  F +
Sbjct: 643 SMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 141/297 (47%), Gaps = 1/297 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++ S C  G+ D+++ + + M   G   N       + +  +  + D A   +
Sbjct: 377 SIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFM 436

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +          YN+++  L   N  +EA Y+F+         +  T+N LI  L R 
Sbjct: 437 QEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRN 496

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  + A     DM   GCS DIV+YN LI  LCR   V R   LL E+  K    P+ V+
Sbjct: 497 GSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKG-IKPNNVS 555

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +IS  CK  ++  A  +  EM +  + P  VT+N LI+G  K+G M +A  + E++ 
Sbjct: 556 YNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLH 615

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +     D++T++ LI  +C+   L+    L +      ++PN  T+ I++    +++
Sbjct: 616 NEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 1/263 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L+ + + YN ++ ++C+    D        M+S G+ P+       +       + + A+
Sbjct: 409 LSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAE 468

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L        V  +   YN+L++AL++  +  +A+ +  +        D  ++N LI+ L
Sbjct: 469 YLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKAL 528

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            R G V ++     +M   G  P+ V+YN LIS LC+   V    EL KE+    E +PD
Sbjct: 529 CRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEM-LNQELTPD 587

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +VTY ++I+G CK+G M  A  +  ++++  +    +T+N+LI    K   +  A  +  
Sbjct: 588 IVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLN 647

Query: 392 RMLSFGYLPDVVTFSSLIDGYCR 414
           R ++ G  P+  T+  ++  + R
Sbjct: 648 RAVTSGITPNERTWGIMVQNFVR 670


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 209/415 (50%), Gaps = 3/415 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  + NL++ SL  +G H  V+  F  + + G  P++      V +C+ AG  D A  +L
Sbjct: 122 SLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAML 181

Query: 215 SQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            +     G      F YN ++  L +     +A+ +F E       P+  T+N +I G  
Sbjct: 182 RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHV 241

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G+++  F     M   G  P++VTYN L+SGLCR   +     L+ E+   S   PD 
Sbjct: 242 KGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSML-PDG 300

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY+ +  G  + G       ++ E    G+   A T ++L++G  K G +  AE + E 
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ++  G +P    +++LI+GYC+   L     + ++MK +++ P+  T+  LIN LCK   
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           + +A   + +++ + + P    +N +ID + +AG +++   ++++M++K  K + ++F  
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++   C  G++ EA++I + M+     P+    NS+I   ++ G   +AF ++++
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEK 535



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 197/409 (48%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  L   G       VFD M   G  PN       +   ++ G  +A   L  Q 
Sbjct: 197 SYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQM 256

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN LL+ L +    DE   +  E       PD +T++IL  GL+R G+ 
Sbjct: 257 LQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDS 316

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +     F +    G      T + L++GLC+  +VA+  ++L E+   +   P    Y +
Sbjct: 317 RTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVL-EMLVHTGLVPTTAIYNT 375

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC++  +  A  I+ +M S  I+P  +T+N LI+G  K+  +  AE +   M   G
Sbjct: 376 LINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSG 435

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y R GQL +   +  +M+ K +  NV +F  ++ A CK  ++ +A 
Sbjct: 436 VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAV 495

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +   D+VP   +YN +ID + ++G  ++A ++V +M+         T+ +L+ G 
Sbjct: 496 AILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGL 555

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C   ++ EA  +   +   G  PD ++ N++IS     G  + A  ++Q
Sbjct: 556 CKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQ 604



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 196/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  ++   + D M  DG  PN       +S   RAG+ D  + L+ + 
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F Y+ L + L +  ++   + +F E  +       +T +IL+ GL + G+V
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKV 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA +    +   G  P    YNTLI+G C+V ++     + +++K +    PD +TY +
Sbjct: 352 AKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSR-HIRPDHITYNA 410

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK+  + +A  +  EM   G+ PS  TFN LID +G+ G +     +   M   G
Sbjct: 411 LINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKG 470

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +V++F S++  +C+NG++ + + + D+M  K++ PN   +  +I+A  +      A 
Sbjct: 471 IKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAF 530

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++++K + +    F YN ++ G CK   +DEA  ++  +  +  +PD V++  +I   
Sbjct: 531 LLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISAC 590

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C KG    A+ +  +M +    P   T + L+S L   G
Sbjct: 591 CNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAG 629



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 181/383 (47%), Gaps = 1/383 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  D  + + D M S   LP+            R G       L  + 
Sbjct: 267 TYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGES 326

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +  +  + LLN L K     +A  + +        P T  +N LI G  ++ ++
Sbjct: 327 LKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDL 386

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M S    PD +TYN LI+GLC++  +    +L+ E++ KS   P V T+ +
Sbjct: 387 QGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME-KSGVDPSVETFNT 445

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G+++K   + ++M   GIK + ++F  ++  F K G +  A  + + M+   
Sbjct: 446 LIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKD 505

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+   ++S+ID Y  +G   Q   L ++MK   +S +++T+ +L+  LCK +++++A 
Sbjct: 506 VVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAE 565

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  L    L P    YN +I   C  G+ D A  ++ EM +   +P   T+  L+   
Sbjct: 566 ELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSAL 625

Query: 518 CMKGRMVEAISIFNKMLRIGCAP 540
              GR+ +   ++  M+     P
Sbjct: 626 GSAGRVHDMECLYQHMVHKNVEP 648



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 167/347 (48%), Gaps = 44/347 (12%)

Query: 259 PDTWTFNILIQGLSRIG---EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
           P   + N+L++ L  +G   +V+ AF       + G  PD   +N  +       ++   
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLV---AAGARPDTFAWNKAVQACVAAGDLDEA 177

Query: 316 HELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
             +L+ +  +SE +  PD  +Y  VI+G  + GK   A  +++EM   G+ P+ +T+N +
Sbjct: 178 LAMLRRMG-RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           IDG  K G++ +   +R++ML  G  P+VVT++ L+ G CR G++++   L DEM   ++
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM 296

Query: 434 SPN-----------------------------------VYTFTILINALCKENRLNDARR 458
            P+                                    YT +IL+N LCK+ ++  A +
Sbjct: 297 LPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQ 356

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L+ L    LVP   +YN +I+G+C+  ++  A  I  +M+ +  +PD +T+  LI G C
Sbjct: 357 VLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC 416

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
               + EA  +  +M + G  P   T N+LI    + G   + F ++
Sbjct: 417 KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVL 463



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 157/344 (45%), Gaps = 7/344 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++  LC+ G     + V + +   G +P + +    ++   +      A  +  Q 
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM 396

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +      YN+L+N L K     EA  +  E  +    P   TFN LI    R G++
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL 456

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K F    DM   G   +++++ +++   C+  ++     +L ++  K +  P+   Y S
Sbjct: 457 EKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHK-DVVPNAQVYNS 515

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y + G  ++A  +  +M S G+  S  T+N+L+ G  K   +  AE +   + + G
Sbjct: 516 IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG 575

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV+++++I   C  G  ++ L+L  EM   ++ P + T+  L++AL    R++D  
Sbjct: 576 LRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDME 635

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
              + +   ++ P   +Y    +   K  ++ +      EM EK
Sbjct: 636 CLYQHMVHKNVEPSSSIYGTRCENESKVASLKK------EMSEK 673



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 118/245 (48%), Gaps = 3/245 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           ++ S +T+N ++ +    G  +    V   M+  G   N       V +  + GK   A 
Sbjct: 436 VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAV 495

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +L      +V  +  +YNS+++A ++    ++A  + ++          +T+N+L++GL
Sbjct: 496 AILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGL 555

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +  ++ +A E  Y++ + G  PD+V+YNT+IS  C   +  R  ELL+E+  K +  P 
Sbjct: 556 CKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEM-HKYDIRPT 614

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           + TY  ++S     G++     +Y  M    ++PS+  +    +   KV ++   + M E
Sbjct: 615 LRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASL--KKEMSE 672

Query: 392 RMLSF 396
           + ++F
Sbjct: 673 KGIAF 677



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 2/139 (1%)

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ +  +L+ +L    R  D R     L      P  F +N  +     AG++DEA  +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 495 VAEM--EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +  M   E    PD  ++ ++I G    G+  +A+ +F++M+  G AP+ IT N++I   
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 553 LKGGMPNEAFRIMQRASED 571
           +KGG     FR+  +  +D
Sbjct: 241 VKGGDLEAGFRLRDQMLQD 259


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 176/333 (52%), Gaps = 1/333 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N L+  +++      A  MF E  R    P   TFN L+ G+ +  ++  A      M 
Sbjct: 247 FNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMA 306

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G +PD+ TY   + GLC+   +    E+ +E++ +   +P+ V +T++I  +CK G +
Sbjct: 307 KAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG-VNPNTVVFTTLIDAHCKEGNV 365

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
                ++ EM + GIK   V +N L +G  +V ++ +A  + E M + G  PD VT+++L
Sbjct: 366 AAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTL 425

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG+C+ G+L+  +++  EM  + ++ +  T+T LI+ L K  R  D+ R L ++    L
Sbjct: 426 IDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGL 485

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  VID FCK  +V     ++ EM+ K  KP  VT+ +++ G C+ G+M  A  
Sbjct: 486 EPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADM 545

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           + N ML IG  PDDIT N L+    K G   +A
Sbjct: 546 LLNAMLNIGVCPDDITYNILLDGHCKHGKVRDA 578



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 164/335 (48%), Gaps = 1/335 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K +N++MR +   G   S + +FD M   G  P        +S   +A   ++A  L   
Sbjct: 245 KQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGL 304

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V    + Y + +  L K     +AV MF+E       P+T  F  LI    + G 
Sbjct: 305 MAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGN 364

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V    E   +M + G   D+V YN L +GLCRV ++   +++++E++  +   PD VTYT
Sbjct: 365 VAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMR-NNGLKPDKVTYT 423

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+CK G++D A  +  EM+  G+    VT+  LI G  K G  V +E +   M+  
Sbjct: 424 TLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEA 483

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T++ +ID +C+N  +  G KL  EM+ K   P V T+ +++N  C   ++ +A
Sbjct: 484 GLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNA 543

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              L  +    + P    YN ++DG CK G V +A
Sbjct: 544 DMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDA 578



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 177/341 (51%), Gaps = 1/341 (0%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  P +      +   IR+GK  +A+ +  +     V  +   +N+L++ + K ++ + A
Sbjct: 239 GVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSA 298

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             +     +    PD +T+   +QGL + G ++ A E F +M   G +P+ V + TLI  
Sbjct: 299 NALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDA 358

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
            C+   VA G EL +E+  +     D+V Y ++ +G C++  +  A  I  EM + G+KP
Sbjct: 359 HCKEGNVAAGLELHREMATRG-IKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKP 417

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             VT+  LIDGF K G +  A  M++ M   G   D VT+++LI G  ++G+     ++ 
Sbjct: 418 DKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERIL 477

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            EM    L P+  T+T++I+A CK + +    + LK+++     P    YN V++GFC  
Sbjct: 478 CEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCIL 537

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           G +  A++++  M      PD +T+ IL+ GHC  G++ +A
Sbjct: 538 GQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDA 578



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 147/296 (49%), Gaps = 1/296 (0%)

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           ++R+  V +A+ F+  +   G  P+   +N L+  + R  ++A    +  E+  +    P
Sbjct: 219 MNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEM-LRRGVPP 277

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            VVT+ +++SG CK   ++ A  +   M   G+ P   T+   + G  K G +  A  M 
Sbjct: 278 TVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMF 337

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E M   G  P+ V F++LID +C+ G +  GL+L  EM  + +  ++  +  L N LC+ 
Sbjct: 338 EEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRV 397

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             L  A   +++++ N L P    Y  +IDGFCK G +D A  +  EM ++    D+VT+
Sbjct: 398 RDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTY 457

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           T LI G    GR V++  I  +M+  G  PD+ T   +I    K       F++++
Sbjct: 458 TTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLK 513



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 8/295 (2%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY   M+ LC+ G + D+V++ F+ MR  G  PN+ +    + +  + G   A   L  +
Sbjct: 316 TYGAFMQGLCKAGRIQDAVEM-FEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHRE 374

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +      YN+L N L +  +   A  + +E      +PD  T+  LI G  + GE
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGE 434

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A E   +M   G + D VTY TLISGL +         +L E+  ++   PD  TYT
Sbjct: 435 LDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEM-MEAGLEPDNTTYT 493

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            VI  +CK   +     +  EM + G KP  VT+NV+++GF  +G M +A+ +   ML+ 
Sbjct: 494 MVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNI 553

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK-GKNLSPNVYTFTILINALCKE 450
           G  PD +T++ L+DG+C++G++       +E+K  K +  +   +T LIN   K+
Sbjct: 554 GVCPDDITYNILLDGHCKHGKVRD----AEELKSAKGMVSDFGLYTSLINEFVKK 604


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 214/439 (48%), Gaps = 27/439 (6%)

Query: 156 FKTYNLVMRSLC------EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+++ S+C         L D  +  +  M + G + N   +  F      AGK + 
Sbjct: 407 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 466

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +         T  Y+ +LN L   +  + A  +F+E  R     D +T+ I++ 
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A ++F +M   GC+P++VTY  LI    +  +V+  +EL  E        
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCL 585

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK------------------PSAVTFN 371
           P++VTY+++I G+CK G+++KA  I+  M  CG K                  P+ VT+ 
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYG 643

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L+DGF K   +  A  + + M   G  P+ + + +LIDG C+ G+L++  ++  EM   
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                +YT++ LI+   K  R + A + L ++  N   P   +Y  +IDG CK G  DEA
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++  MEEK C+P+ VT+T +I G  M G++   + +  +M   G AP+ +T   LI  
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823

Query: 552 LLKGGMPNEAFRIMQRASE 570
             K G  + A  +++   +
Sbjct: 824 CCKNGALDVAHNLLEEMKQ 842



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 200/488 (40%), Gaps = 96/488 (19%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LCE  L +      + MR+   LPN       +  C+   +    K +L+   
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI---------- 268
                 S  ++NSL++A     +   A  + K+  +    P    +NILI          
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424

Query: 269 -------------------------------QGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                                          + L   G+ +KAF    +M   G  PD  
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ +++ LC  +++     L +E+K +     DV TYT ++  +CK G +++A   +NE
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VT+  LI  + K   +  A  + E MLS G LP++VT+S+LIDG+C+ GQ
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  ++ + M G    P                   D   + KQ   N   P    Y  
Sbjct: 604 VEKACQIFERMCGSKDVP-------------------DVDMYFKQYDDNSERPNVVTYGA 644

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS--------- 528
           ++DGFCK+  V+EA  ++  M  + C+P+++ +  LI G C  G++ EA           
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 529 --------------------------IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
                                     + +KML   CAP+ +    +I  L K G  +EA+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 563 RIMQRASE 570
           ++MQ   E
Sbjct: 765 KLMQMMEE 772



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 207/488 (42%), Gaps = 86/488 (17%)

Query: 137 KLGLKFLEFSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K+ L FL F  +    L     TY +++ S C+ GL +  +  F+ MR  G  PN     
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE---- 251
             + + ++A K   A  L           +   Y++L++   K    ++A  +F+     
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617

Query: 252 --------YFRLY----SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
                   YF+ Y     +P+  T+  L+ G  +   V++A +    M   GC P+ + Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677

Query: 300 NTLISGLCRVNEVARGHELLKEVK----------------------------------FK 325
           + LI GLC+V ++    E+  E+                                    +
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +  +P+VV YT +I G CK+GK D+A  +   M   G +P+ VT+  +IDGFG +G + +
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 797

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN-------------------------- 419
              + ERM S G  P+ VT+  LID  C+NG L+                          
Sbjct: 798 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 857

Query: 420 -------QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW--NDLVP 470
                  + L L DE+   + +P +  + +LI+ L K  RL  A R L+++      LV 
Sbjct: 858 GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               YN +I+  C A  V+ A  + +EM +K   P+  +F  LI G     ++ EA+ + 
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977

Query: 531 NKMLRIGC 538
           + +  + C
Sbjct: 978 DFISHMVC 985



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 208/495 (42%), Gaps = 47/495 (9%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R   EKLS    +EV++ +  P   + F  ++   +   H+   YN    +L ++ + D 
Sbjct: 124 RQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYN----ALVDLIVRDD 179

Query: 175 VQVV----FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
            + V       +R D        +   V    R G    A   L + +      S   YN
Sbjct: 180 DEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239

Query: 231 SLLNALVKQNNADEAVYMFKEY-----------FRLYSQ--------------------- 258
            L+ A +K +  D A  + +E             R ++                      
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV 299

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PDT  +  LI GL      ++A +F   M +  C P++VTY+TL+ G     ++ R   +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +  +  + P    + S++  YC  G    A  +  +M  CG  P  V +N+LI    
Sbjct: 360 LNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418

Query: 379 KVGNMVS------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
              + ++      AE     ML+ G + + +  SS     C  G+  +   +  EM G+ 
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             P+  T++ ++N LC  +++  A    +++K   LV   + Y  ++D FCKAG +++A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               EM E  C P+ VT+T LI  +    ++  A  +F  ML  GC P+ +T ++LI   
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 553 LKGGMPNEAFRIMQR 567
            K G   +A +I +R
Sbjct: 599 CKAGQVEKACQIFER 613


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 192/370 (51%), Gaps = 7/370 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMR---SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           Y  VM  LC+ G     Q  FD +R        PN+      + +  + G  D A  LL+
Sbjct: 181 YGTVMNGLCKKG---HTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLN 237

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + +   +    F Y++L++AL K +  +    +F E   L   P+  TFN +I GL + G
Sbjct: 238 EMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEG 297

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +V+ A E    M   G  PD++TYN +I G     +V R  E+   +  KS   PD+++Y
Sbjct: 298 KVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS-IEPDIISY 356

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I+GY +  K+D+A  +  E++  G+KPS VT NVL+ G  ++G   SA+   + MLS
Sbjct: 357 NILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLS 416

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G++PD+ T  +L+ GY +NG + + +    +++ +    N+  +T +I+ LCK  +L+ 
Sbjct: 417 AGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDK 476

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    ++L    L P    Y  +I G+C+ G +DEA  ++ +ME+  C  D  T+ +++ 
Sbjct: 477 AHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVR 536

Query: 516 GHCMKGRMVE 525
           G     ++ E
Sbjct: 537 GFLRSNKVSE 546



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 189/353 (53%), Gaps = 7/353 (1%)

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
           P EV     MY +++N L K+ +  +A  + +   +  ++P+T T+ I+I    + G + 
Sbjct: 176 PNEV-----MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     +M      PDI TY+TLI  LC++++      L  E+       P+V T+ SV
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEM-IHLNIYPNVCTFNSV 289

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK GK++ A  I   M   G+ P  +T+N++IDG+G  G +  A  + + M++   
Sbjct: 290 IDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSI 349

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD+++++ LI+GY R  ++++ +++C E+  K L P++ T  +L++ L +  R   A+ 
Sbjct: 350 EPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQN 409

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           F  ++     +P  + +  ++ G+ K G V+EA     ++E +R   +   +T +I G C
Sbjct: 410 FFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC 469

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             G++ +A + F K+  IG  PD IT  ++IS   + G+ +EA + M R  ED
Sbjct: 470 KNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA-KDMLRKMED 521



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 190/408 (46%), Gaps = 5/408 (1%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D    +F  M     LP+       + + +      +   L  +     + +  F+ + +
Sbjct: 54  DDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG- 291
           +N+    +  D    +   +F+     +  TF  LI+GL    +VK A   F  +     
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C P+ V Y T+++GLC+     +  +LL+ ++ +    P+  TYT VI  +CK G +D A
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLME-QGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
           T + NEM    I P   T++ LID   K+    +   +   M+     P+V TF+S+IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G++    ++   M  K + P+V T+ ++I+      +++ AR     +    + P 
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I+G+ +   +DEA  +  E+ +K  KP  VT  +L+ G    GR   A + F+
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQL 576
           +ML  G  PD  T  +L+    K G+  EA   F  ++R  ED N+Q+
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 154/320 (48%), Gaps = 3/320 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FLE   +N+  N    T+N V+  LC+ G  +  + +  YM   G  P+       +   
Sbjct: 271 FLEMIHLNIYPN--VCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G+ D A+ +        +      YN L+N   +Q   DEA+ + +E  +   +P  
Sbjct: 329 GLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSI 388

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T N+L+ GL  +G  K A  FF +M S G  PD+ T+ TL+ G  +   V        +
Sbjct: 389 VTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK 448

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ + E   ++  YT+VI G CK GK+DKA   + ++   G+ P  +T+  +I G+ + G
Sbjct: 449 LERRRE-DTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEG 507

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ M  +M   G L D  T++ ++ G+ R+ ++++     +E+ GK+ S    T  
Sbjct: 508 LLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVE 567

Query: 442 ILINALCKENRLNDARRFLK 461
           +L++ + ++  +     ++K
Sbjct: 568 LLMDIIAEDPSITRKMHWIK 587


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 200/398 (50%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++  L + G  D    +++ M   GH+P + +    + S  + G+ +    +  + 
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N+ ++ + K    ++   +F+E       PD  +++ILI GL + G  
Sbjct: 536 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 595

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            + +E FY M   GC  D   YN +I G C+  +V + ++LL+E+K K    P VVTY S
Sbjct: 596 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH-PPTVVTYGS 654

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+ ++D+A  ++ E  S GIK + V ++ LIDGFGKVG +  A  + E ++  G
Sbjct: 655 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 714

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ L+D   +  ++N+ L     MK     PN  T++ILIN LC+  + N A 
Sbjct: 715 LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAF 774

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++   L P    Y  +I G  KAGN+ EA+ + +  +     PD  ++  +I G 
Sbjct: 775 VFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 834

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
               + ++A ++F +    GC     T   L+  L K 
Sbjct: 835 SSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 872



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 214/451 (47%), Gaps = 2/451 (0%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           L EK  P   + V+KRL +    + + +++       H  + YN ++  +      D ++
Sbjct: 86  LGEKPLPELVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLE 145

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            + + M   G  P+S +    V++C+++ K   A  ++   R  +   +   Y  L+ AL
Sbjct: 146 RILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGAL 205

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            +    D  + +F +   L  + +   F  LI+  +R G V  A     +M S     DI
Sbjct: 206 SEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADI 265

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           V YN  I    +  +V    +   E+K      PD VTYTS+I   CK  ++D+A  ++ 
Sbjct: 266 VLYNVCIDCFGKAGKVDMSWKFFHEMKSHG-LMPDDVTYTSMIGVLCKANRLDEAVELFE 324

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           ++      P A  +N +I G+G  G    A  + ER  + G +P V+ ++ ++    +  
Sbjct: 325 QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKR 384

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++ + L++ +EMK ++  PNV T+ ILI+ LC+E +LN A      ++   L P     N
Sbjct: 385 RVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 443

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +ID  CKA  ++EA  I   M++K C P+ VTF+ LI G    GR+ +A S++ KML  
Sbjct: 444 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC 503

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           G  P  I   SLI    K G   +  +I + 
Sbjct: 504 GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 534



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 198/410 (48%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  ++   + D M   G  PN   +   +    +A K + A  +    
Sbjct: 406 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 465

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   ++SL++ L K    D+A  ++++       P    +  LI+   + G  
Sbjct: 466 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRK 525

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   + + +M   GCSPD+   NT +  + +  E  +G  L +E+     F PD  +Y+ 
Sbjct: 526 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG-FIPDARSYSI 584

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K G  ++   ++  M   G       +N +IDGF K G +  A  + E M   G
Sbjct: 585 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 644

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P VVT+ S+IDG  +  +L++   L +E K   +  NV  ++ LI+   K  R+++A 
Sbjct: 645 HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAY 704

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +++L    L P  + +N ++D   KA  ++EA +    M++ +C P+++T++ILI G 
Sbjct: 705 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 764

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   +  +A   + +M ++G  P+ IT  ++IS L K G   EA  +  R
Sbjct: 765 CRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSR 814



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 199/445 (44%), Gaps = 3/445 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           + V  R       L  L+  + N SL+     YN+ +    + G  D     F  M+S G
Sbjct: 237 IRVFAREGRVDAALSLLDEMKSN-SLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHG 295

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
            +P+       +    +A + D A  L  Q          + YN+++         DEA 
Sbjct: 296 LMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAY 355

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            + +      S P    +N ++  L +   V++A   F +M      P++ TYN LI  L
Sbjct: 356 GLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDML 414

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           CR  ++    E+  +++    F P+V+T   +I   CK  K+++A  I+  M+     P+
Sbjct: 415 CREGKLNAALEIRDDMERAGLF-PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 473

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           AVTF+ LIDG GK G +  A  + E+ML  G++P  + ++SLI  + + G+   G K+  
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 533

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM     SP++      ++ + K       R   +++  +  +P    Y+ +I G  KAG
Sbjct: 534 EMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 593

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
             +E   +   M+E+ C  D   +  +I G C  G++ +A  +  +M   G  P  +T  
Sbjct: 594 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYG 653

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
           S+I  L K    +EA+ + + A  +
Sbjct: 654 SVIDGLAKIDRLDEAYMLFEEAKSN 678



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 151/300 (50%), Gaps = 1/300 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++Y++++  L + GL +    +F  M+  G + ++      +    ++GK + A  LL +
Sbjct: 580 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 639

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +      +   Y S+++ L K +  DEA  +F+E      + +   ++ LI G  ++G 
Sbjct: 640 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 699

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A+    ++   G +P++ T+N L+  L +  E+       + +K   +  P+ +TY+
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK-DLKCPPNQITYS 758

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G C++ K +KA   + EM   G+KP+ +T+  +I G  K GN++ A  +  R  + 
Sbjct: 759 ILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKAN 818

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD  +++++I+G     +      L +E + K  + +  T  +L++AL K   L  A
Sbjct: 819 GGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 1/282 (0%)

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            YN+L+  + R  E      +L+E+   S F P       +++   K  K+ +A  I   
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSL-SGFGPSSNISIELVANCVKSRKLREAFDIIQT 185

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M     +P+   + +LI    +V        +  +M   GY  +V  F++LI  + R G+
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR 245

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++  L L DEMK  +L  ++  + + I+   K  +++ + +F  ++K + L+P    Y  
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I   CKA  +DEA  +  ++E+ R  P    +  +I+G+   G+  EA  +  +    G
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
             P  I  N +++CL K     EA RI +    D    +P++
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTY 407


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 214/439 (48%), Gaps = 27/439 (6%)

Query: 156 FKTYNLVMRSLC------EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+++ S+C         L D  +  +  M + G + N   +  F      AGK + 
Sbjct: 407 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 466

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +         T  Y+ +LN L   +  + A  +F+E  R     D +T+ I++ 
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A ++F +M   GC+P++VTY  LI    +  +V+  +EL  E        
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCL 585

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK------------------PSAVTFN 371
           P++VTY+++I G+CK G+++KA  I+  M  CG K                  P+ VT+ 
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYG 643

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L+DGF K   +  A  + + M   G  P+ + + +LIDG C+ G+L++  ++  EM   
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                +YT++ LI+   K  R + A + L ++  N   P   +Y  +IDG CK G  DEA
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++  MEEK C+P+ VT+T +I G  M G++   + +  +M   G AP+ +T   LI  
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823

Query: 552 LLKGGMPNEAFRIMQRASE 570
             K G  + A  +++   +
Sbjct: 824 CCKNGALDVAHNLLEEMKQ 842



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 200/488 (40%), Gaps = 96/488 (19%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LCE  L +      + MR+   LPN       +  C+   +    K +L+   
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI---------- 268
                 S  ++NSL++A     +   A  + K+  +    P    +NILI          
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424

Query: 269 -------------------------------QGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                                          + L   G+ +KAF    +M   G  PD  
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ +++ LC  +++     L +E+K +     DV TYT ++  +CK G +++A   +NE
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VT+  LI  + K   +  A  + E MLS G LP++VT+S+LIDG+C+ GQ
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  ++ + M G    P                   D   + KQ   N   P    Y  
Sbjct: 604 VEKACQIFERMCGSKDVP-------------------DVDMYFKQYDDNSERPNVVTYGA 644

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS--------- 528
           ++DGFCK+  V+EA  ++  M  + C+P+++ +  LI G C  G++ EA           
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704

Query: 529 --------------------------IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
                                     + +KML   CAP+ +    +I  L K G  +EA+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 563 RIMQRASE 570
           ++MQ   E
Sbjct: 765 KLMQMMEE 772



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 219/483 (45%), Gaps = 57/483 (11%)

Query: 137 KLGLKFLEFSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K+ L FL F  +    L     TY +++ S C+ GL +  +  F+ MR  G  PN     
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE---- 251
             + + ++A K   A  L           +   Y++L++   K    ++A  +F+     
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617

Query: 252 --------YFRLY----SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
                   YF+ Y     +P+  T+  L+ G  +   V++A +    M   GC P+ + Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM- 358
           + LI GLC+V ++    E+  E+  +  F   + TY+S+I  Y K+ + D A+ + ++M 
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMS-EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736

Query: 359 -NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
            NSC   P+ V +  +IDG  KVG    A  + + M   G  P+VVT++++IDG+   G+
Sbjct: 737 ENSCA--PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +   L+L + M  K ++PN  T+ +LI+  CK   L+ A   L+++K          Y  
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854

Query: 478 VIDGFCKA-----GNVDEA-----------------NVIVAEMEEK--RCKPDKVTFTIL 513
           VI+GF K      G +DE                  N+I A+  E   R   +  TF+  
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914

Query: 514 IIGH-----------CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           ++ +           C+  ++  A  +F++M + G  P+  +  SLI  L +    +EA 
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974

Query: 563 RIM 565
            ++
Sbjct: 975 LLL 977



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 208/495 (42%), Gaps = 47/495 (9%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R   EKLS    +EV++ +  P   + F  ++   +   H+   YN    +L ++ + D 
Sbjct: 124 RQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYN----ALVDLIVRDD 179

Query: 175 VQVV----FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
            + V       +R D        +   V    R G    A   L + +      S   YN
Sbjct: 180 DEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239

Query: 231 SLLNALVKQNNADEAVYMFKEY-----------FRLYSQ--------------------- 258
            L+ A +K +  D A  + +E             R ++                      
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV 299

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PDT  +  LI GL      ++A +F   M +  C P++VTY+TL+ G     ++ R   +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +  +  + P    + S++  YC  G    A  +  +M  CG  P  V +N+LI    
Sbjct: 360 LNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418

Query: 379 KVGNMVS------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
              + ++      AE     ML+ G + + +  SS     C  G+  +   +  EM G+ 
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             P+  T++ ++N LC  +++  A    +++K   LV   + Y  ++D FCKAG +++A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               EM E  C P+ VT+T LI  +    ++  A  +F  ML  GC P+ +T ++LI   
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 553 LKGGMPNEAFRIMQR 567
            K G   +A +I +R
Sbjct: 599 CKAGQVEKACQIFER 613



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 40/306 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++  LC++G  D  Q V   M   G           +    +  + D A  +LS+ 
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +Y  +++ L K    DEA  + +       QP+  T+  +I G   IG++
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   E    MGS G +P+ VTY  LI   C+   +   H LL+E+K ++ +      Y  
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTHWPTHTAGYRK 854

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF- 396
           VI G+ K  +  ++ G+ +E+      P    + +LID   K   +  A  + E + +F 
Sbjct: 855 VIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912

Query: 397 ------------------------------------GYLPDVVTFSSLIDGYCRNGQLNQ 420
                                               G +P++ +F SLI G  RN ++++
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972

Query: 421 GLKLCD 426
            L L D
Sbjct: 973 ALLLLD 978


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/537 (25%), Positives = 259/537 (48%), Gaps = 26/537 (4%)

Query: 55  PSRVRASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLL-RSSYLSDTC 113
           P  +R+ T +   HF       S   D  +   R + +  FV  V  ++  + S+     
Sbjct: 4   PCTIRSITSS---HFRNSFRNVSSVIDSAQEECRIAEDKQFVDAVKRIVRGKRSWEIALS 60

Query: 114 ARYLCEKLSPLNSLEV-IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGL- 171
           +  +  +L  ++  E+ I  +D+PKLGL+F  F  ++   +HS  ++ +++ +L +  L 
Sbjct: 61  SELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLF 120

Query: 172 -----------------HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGL 213
                             D   V+F        L +S   +  +   +R+ +  D     
Sbjct: 121 WPASSLLQTLLLRALKPSDVFNVLFSCYEK-CKLSSSSSFDLLIQHYVRSRRVLDGVLVF 179

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
                   +       ++LL+ LVK  +   A+ +F +   +  +PD + +  +I+ L  
Sbjct: 180 KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE 239

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           + ++ +A E    M + GC  +IV YN LI GLC+  +V     + K++  K +  PDVV
Sbjct: 240 LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-DLKPDVV 298

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY +++ G CK+ + +    + +EM      PS    + L++G  K G +  A  + +R+
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           + FG  P++  +++LID  C+  + ++   L D M    L PN  T++ILI+  C+  +L
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A  FL ++    L    + YN +I+G CK G++  A   +AEM  K+ +P  VT+T L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + G+C KG++ +A+ ++++M   G AP   T  +L+S L + G+  +A ++    +E
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 207/420 (49%), Gaps = 3/420 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ +      Y  V+RSLCE+      + +  +M + G   N       +    +  K 
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A G+       ++      Y +L+  L K    +  + M  E   L   P     + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++GL + G++++A      +  FG SP++  YN LI  LC+  +     ELL +   K  
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRMGKIG 397

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ VTY+ +I  +C+ GK+D A     EM   G+K S   +N LI+G  K G++ +AE
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                M++    P VVT++SL+ GYC  G++N+ L+L  EM GK ++P++YTFT L++ L
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517

Query: 448 CKENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            +   + DA +   ++ +WN + P    YN +I+G+C+ G++ +A   + EM EK   PD
Sbjct: 518 FRAGLIRDAVKLFNEMAEWN-VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             ++  LI G C+ G+  EA    + + +  C  ++I    L+    + G   EA  + Q
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 193/426 (45%), Gaps = 7/426 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  ++ +   YN ++ SLC+       +++FD M   G  PN       +    R GK 
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A   L +     + +S + YNSL+N   K  +   A     E      +P   T+  L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + G    G++ KA   +++M   G +P I T+ TL+SGL R   +    +L  E+  +  
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWN 537

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ VTY  +I GYC+ G M KA     EM   GI P   ++  LI G    G    A+
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              + +       + + ++ L+ G+CR G+L + L +C EM  + +  ++  + +LI+  
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            K          LK++    L P   +Y  +ID   K G+  EA  I   M  + C P++
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+T +I G C  G + EA  + +KM  +   P+ +T    +  L KG +       MQ+
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD------MQK 771

Query: 568 ASEDQN 573
           A E  N
Sbjct: 772 AVELHN 777



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 170/339 (50%), Gaps = 6/339 (1%)

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +F P E  +S     SL+  L K+   +EA+ + K        P+ + +N LI  L +  
Sbjct: 327 RFSPSEAAVS-----SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +  +A   F  MG  G  P+ VTY+ LI   CR  ++      L E+   +     V  Y
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM-VDTGLKLSVYPY 440

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            S+I+G+CK G +  A G   EM +  ++P+ VT+  L+ G+   G +  A  +   M  
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P + TF++L+ G  R G +   +KL +EM   N+ PN  T+ ++I   C+E  ++ 
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A  FLK++    +VP  + Y P+I G C  G   EA V V  + +  C+ +++ +T L+ 
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           G C +G++ EA+S+  +M++ G   D +    LI   LK
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 202/473 (42%), Gaps = 71/473 (15%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  L  S   YN ++   C+ G   + +     M +    P        +      GK 
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  L  +     +  S + + +LL+ L +     +AV +F E      +P+  T+N++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+G    G++ KAFEF  +M   G  PD  +Y  LI GLC   + +     +  +  K  
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH-KGN 607

Query: 328 FSPDVVTYTSVISGYCKLGKMDKAT----------------------------------- 352
              + + YT ++ G+C+ GK+++A                                    
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+  EM+  G+KP  V +  +ID   K G+   A  + + M++ G +P+ VT++++I+G 
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727

Query: 413 CRNGQLNQGLKLCDEM--------------------KG---------------KNLSPNV 437
           C+ G +N+   LC +M                    KG               K L  N 
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+ +LI   C++ R+ +A   + ++  + + P    Y  +I+  C+  +V +A  +   
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           M EK  +PD+V +  LI G C+ G M +A  + N+MLR G  P++ T  +  S
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 211/442 (47%), Gaps = 6/442 (1%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY--NLVMRSLCEMGLHDSVQVVFDYMRS 184
           L+ I    N  L +  +E S + ++ + SF+ +  N+ +R L   G  +      + M  
Sbjct: 75  LQQIVSTPNGDLNVIGMESSPIGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIY 134

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
            G +P+       +    R+GK   A  ++              YN L+    K    D+
Sbjct: 135 QGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDK 194

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A+ + +   R+   PD  T+N +++ L   G++K+A E         C PD++TY  LI 
Sbjct: 195 ALEVLE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIE 251

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
             C  + V +  +LL E++ K    PDVVTY  +I+G CK G++D+A    N M S G K
Sbjct: 252 ATCNDSGVGQAMKLLDEMR-KKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCK 310

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ +T N+++      G  + AE +   ML  G  P VVTF+ LI+  CR   L + + +
Sbjct: 311 PNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDV 370

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            ++M      PN  ++  L++  C+E +++ A  +L+ +      P    YN ++   CK
Sbjct: 371 LEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK 430

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G VD A  I+ ++  K C P  +T+  +I G    G+   A+ +  +M R G  PD IT
Sbjct: 431 DGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIIT 490

Query: 545 VNSLISCLLKGGMPNEAFRIMQ 566
            ++L+  L + G  +EA +I  
Sbjct: 491 YSTLLRGLGREGKVDEAIKIFH 512



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 180/367 (49%), Gaps = 1/367 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +S+     TYN ++RSLC+ G       V D        P+       + +         
Sbjct: 202 MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQ 261

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  LL + R          YN L+N + K+   DEA+           +P+  T NI+++
Sbjct: 262 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILR 321

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            +   G    A     DM   GCSP +VT+N LI+ LCR   + R  ++L+++  K    
Sbjct: 322 SMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP-KHGCV 380

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+ ++Y  ++ G+C+  KMD+A      M S G  P  VT+N L+    K G + +A  +
Sbjct: 381 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEI 440

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             ++ S G  P ++T++++IDG  + G+    ++L +EM+ K L P++ T++ L+  L +
Sbjct: 441 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGR 500

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E ++++A +    ++   + P    YN ++ G CKA     A   +A M EK CKP + T
Sbjct: 501 EGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEAT 560

Query: 510 FTILIIG 516
           +TILI G
Sbjct: 561 YTILIEG 567



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 193/392 (49%), Gaps = 4/392 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G  D    V + M      P+       + S   +GK   A  +L + 
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E       Y  L+ A    +   +A+ +  E  +   +PD  T+N+LI G+ + G +
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +F  +M S+GC P+++T+N ++  +C          LL ++  +   SP VVT+  
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDM-LRKGCSPSVVTFNI 353

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C+   + +A  +  +M   G  P+++++N L+ GF +   M  A    E M+S G
Sbjct: 354 LINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 413

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+++L+   C++G+++  +++ +++  K  SP + T+  +I+ L K  +   A 
Sbjct: 414 CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAV 473

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L++++   L P    Y+ ++ G  + G VDEA  I  +ME    KP  VT+  +++G 
Sbjct: 474 ELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C   +   AI     M+  GC P + T   LI
Sbjct: 534 CKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 146/290 (50%), Gaps = 1/290 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C+ G  D      + M S G  PN       + S    G+   A+ LLS  
Sbjct: 280 TYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDM 339

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + S   +N L+N L ++     A+ + ++  +    P++ ++N L+ G  +  ++
Sbjct: 340 LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKM 399

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E+   M S GC PDIVTYNTL++ LC+  +V    E+L ++  K   SP ++TY +
Sbjct: 400 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG-CSPVLITYNT 458

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+GK + A  +  EM   G+KP  +T++ L+ G G+ G +  A  +   M    
Sbjct: 459 VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLS 518

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
             P  VT+++++ G C+  Q ++ +     M  K   P   T+TILI  +
Sbjct: 519 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 185/349 (53%), Gaps = 4/349 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +  LL+ + K    D  + +F++   L   P  +T NI++  + R  +  +A  F   M 
Sbjct: 85  FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD+VT+ +L+ G C  N +     L  ++     F P+VVTYT++I   CK   +
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQI-VGMGFRPNVVTYTTLIHCLCKNRHL 203

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A  I+N+M   GI+P+ VT+N L+ G  ++G    A ++   M+  G  P+V+TF++L
Sbjct: 204 NHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTAL 263

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID + + G++ +  +L   M   ++ P+V+T+T LIN LC   RL++AR+    ++ N  
Sbjct: 264 IDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGY 323

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  +I GFCK+  V++   I  EM +K    + +T+T+LI G+C+ GR   A  
Sbjct: 324 YPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQE 383

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
           +FN+M      PD  T N L+  L   G   +A   F+ M++   D N+
Sbjct: 384 VFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINI 432



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 209/422 (49%), Gaps = 11/422 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-----CDA 209
           S   +  ++  + +M   D V  +F+ M+  G  P        ++   R+ +     C  
Sbjct: 81  SIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFL 140

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            K +   F P  VT     + SLL+     N  ++A+ +F +   +  +P+  T+  LI 
Sbjct: 141 GKMMKLGFEPDLVT-----FTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIH 195

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L +   +  A E F  MG  G  P++VTYN+L+SGLC +   +    LL+++  K    
Sbjct: 196 CLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDM-MKRGIQ 254

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+V+T+T++I  + K+GK+ +A  +Y  M    + P   T+  LI+G    G +  A  M
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQM 314

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M S GY P+ VT+++LI G+C++ ++  G K+  EM  K L  N  T+T+LI   C 
Sbjct: 315 FYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCL 374

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R + A+    Q+      P    YN ++DG C  G V++A +I   M ++    + VT
Sbjct: 375 VGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVT 434

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +TI+I G C  G++ +A  +F  +   G  P+ IT  ++IS   + G  +EA  + ++  
Sbjct: 435 YTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMK 494

Query: 570 ED 571
           ED
Sbjct: 495 ED 496



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 196/412 (47%), Gaps = 9/412 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHD----SVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +F  Y  ++R+    GLH+        +F  M     LP+       +S   +  + D  
Sbjct: 46  AFSNYRKILRN----GLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVV 101

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  Q +   ++   +  N ++N + + +    A     +  +L  +PD  TF  L+ G
Sbjct: 102 ISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHG 161

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
                 ++ A   F  +   G  P++VTY TLI  LC+   +    E+  ++   +   P
Sbjct: 162 FCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG-DNGIRP 220

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +VVTY S++SG C++G+   A  +  +M   GI+P+ +TF  LID F KVG ++ A+ + 
Sbjct: 221 NVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELY 280

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + M+     PDV T+++LI+G C  G+L++  ++   M+     PN  T+T LI+  CK 
Sbjct: 281 KVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS 340

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R+ D  +   ++    LV     Y  +I G+C  G  D A  +  +M  +R  PD  T+
Sbjct: 341 KRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTY 400

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            +L+ G C  G + +A+ IF  M +     + +T   +I  + K G   +AF
Sbjct: 401 NVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 196/421 (46%), Gaps = 12/421 (2%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L VI ++    + +   E  ++ L ++    T N+VM  +C              M   G
Sbjct: 89  LSVIAKMKRFDVVISLFEQMQI-LGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLG 147

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNN 241
             P+       +       + + A  L  Q     FRP  VT     Y +L++ L K  +
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVT-----YTTLIHCLCKNRH 202

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            + AV +F +      +P+  T+N L+ GL  IG    A     DM   G  P+++T+  
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI    +V ++    EL K V  +    PDV TYT++I+G C  G++D+A  ++  M S 
Sbjct: 263 LIDAFVKVGKIMEAKELYK-VMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESN 321

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G  P+ VT+  LI GF K   +     +   M   G + + +T++ LI GYC  G+ +  
Sbjct: 322 GYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVA 381

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            ++ ++M  +   P++ T+ +L++ LC    +  A    K ++  ++      Y  +I G
Sbjct: 382 QEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQG 441

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G V++A  +   +  K  KP+ +T+T +I G C +G + EA ++F KM   G  P+
Sbjct: 442 MCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501

Query: 542 D 542
           +
Sbjct: 502 E 502



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 414 RNG----QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           RNG    Q N+ L L   M      P++  FT L++ + K  R +      +Q++   + 
Sbjct: 55  RNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGIS 114

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P  +  N V++  C++     A+  + +M +   +PD VTFT L+ G C   R+ +A+++
Sbjct: 115 PVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALAL 174

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           F++++ +G  P+ +T  +LI CL K    N A  I  +  ++
Sbjct: 175 FDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDN 216


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 211/433 (48%), Gaps = 39/433 (9%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           L D+V      +  + H P  P+ EF   +SS ++      A     Q     +    F 
Sbjct: 33  LDDAVSSFNHILHMNNHTP--PIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFT 90

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N L+N        + A  M  +  +L  QPDT T N L++GL   G+VK+A  F   + 
Sbjct: 91  FNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVI 150

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK---- 344
                 D V+Y TLI+GLC+  E     +LL++++      PDV+ YT++I  +CK    
Sbjct: 151 RKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLV 210

Query: 345 -------------------------------LGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
                                          +G++ +A G+ NEM+   + P+  TFN+L
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           IDG  K G +  A  +   M+  G  P+VVT++SL+DGY    ++N+   + + +  + +
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +PNV++++++IN LCK   +++A +  K++   ++ P    Y+ +IDG CK+G + +   
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ E+  +    + +T+  L+ G C   ++ +AI++  KM   G  PD  T  +L+  L 
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450

Query: 554 KGGMPNEAFRIMQ 566
           K G   +A RI Q
Sbjct: 451 KNGRLKDAQRIYQ 463



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 213/423 (50%), Gaps = 26/423 (6%)

Query: 158 TYNLVMRSLC-------EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           T N ++R LC        +  HD V      +R   HL            C ++G+  AA
Sbjct: 125 TVNTLLRGLCLNGKVKEALNFHDHV------IRKRFHLDQVSYGTLINGLC-KSGETRAA 177

Query: 211 KGLLSQF------RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
             LL +       RP        MY +++++  K     +A  ++ E       P+  TF
Sbjct: 178 LQLLRKIEGLLLVRP-----DVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 232

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           N LI G   +G++K+A     +M     +P++ T+N LI GLC+  EV +   +L  V  
Sbjct: 233 NSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVL-SVMI 291

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    P+VVTYTS++ GY  + +++KA  ++N ++  G+ P+  +++V+I+G  K   + 
Sbjct: 292 KQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVD 351

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  + + M      P+ VT+SSLIDG C++G+++    L DE+  +    N+ T+  L+
Sbjct: 352 EAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLL 411

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           N LCK ++++ A   L ++K   + P    Y  ++DG CK G + +A  I  ++  K   
Sbjct: 412 NGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYP 471

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +   +T++I G C +G   EA+S+ ++M   GC PD +T  +LIS L K     +A ++
Sbjct: 472 LNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKL 531

Query: 565 MQR 567
           ++ 
Sbjct: 532 LRE 534



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 199/386 (51%), Gaps = 18/386 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS-DGHL---PNSPMIEFFVSSCIRAGKCDAAKGL 213
           +Y  ++  LC+ G     +     +R  +G L   P+  M    + S  +      A  L
Sbjct: 160 SYGTLINGLCKSG---ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDL 216

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
            S+    ++  +   +NSL+          EAV +  E       P+ +TFNILI GL +
Sbjct: 217 YSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCK 276

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            GEVKKA      M   G  P++VTY +L+ G   V EV +   +   +  +   +P+V 
Sbjct: 277 EGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG-VTPNVH 335

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y+ +I+G CK   +D+A  ++ EM+   + P+ VT++ LIDG  K G +     + + +
Sbjct: 336 SYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEI 395

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + G   +++T++SL++G C+N Q+++ + L  +MK + + P++ T+T L++ LCK  RL
Sbjct: 396 NNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRL 455

Query: 454 NDARRFLKQLKWNDLVPKPF-----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
            DA+R      + DL+ K +     MY  +I+G CK G  DEA  ++++ME+  C PD V
Sbjct: 456 KDAQRI-----YQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAV 510

Query: 509 TFTILIIGHCMKGRMVEAISIFNKML 534
           T+  LI       +  +A+ +  +M+
Sbjct: 511 TYETLISALFKNNKNGKAVKLLREMI 536



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 174/361 (48%), Gaps = 11/361 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++ S C+  L      ++  M      PN       +      G+   A GLL++  
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  + + +N L++ L K+    +A  +     +   +P+  T+  L+ G   + EV 
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA   F  +   G +P++ +Y+ +I+GLC+   V    +L KE+  K+  +P+ VTY+S+
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKN-MTPNTVTYSSL 375

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G++     + +E+N+ G   + +T+N L++G  K   +  A  +  +M   G 
Sbjct: 376 IDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGI 435

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD+ T+++L+DG C+NG+L    ++  ++  K    N+  +T++IN LCKE   ++A  
Sbjct: 436 QPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALS 495

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM----------EEKRCKPDKV 508
            L Q++ N  +P    Y  +I    K     +A  ++ EM          E+ R K DK 
Sbjct: 496 LLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESDCSGKEQSREKKDKD 555

Query: 509 T 509
           T
Sbjct: 556 T 556



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 139/278 (50%), Gaps = 1/278 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N +  T+N+++  LC+ G       V   M   G  PN       +       + + A
Sbjct: 259 NVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKA 318

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K + +      VT +   Y+ ++N L K    DEAV +FKE       P+T T++ LI G
Sbjct: 319 KHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDG 378

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +   ++   ++ + G   +I+TYN+L++GLC+ ++V +   LL ++K      P
Sbjct: 379 LCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMK-DEGIQP 437

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+ TYT+++ G CK G++  A  IY ++   G   +   + V+I+G  K G    A  + 
Sbjct: 438 DMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLL 497

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            +M   G +PD VT+ +LI    +N +  + +KL  EM
Sbjct: 498 SQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 183/365 (50%), Gaps = 4/365 (1%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV- 246
           LP        +  C R  +      L  +F    + M   + + LL  L     +D+ V 
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVN 175

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM--GSFGCSPDIVTYNTLIS 304
            +      L  +PDT ++N +++ L      ++A +  + M   S GCSP++VTYNT+I 
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GL R  EV++   L  E+  +    PDVVTYTS+I   CK   MDKA  +  +M S G +
Sbjct: 236 GLFREGEVSKACNLFHEM-MQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQ 294

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ VT+N +I G+   G       M   M S G +P++VT +S +   C++G+  +  + 
Sbjct: 295 PNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEF 354

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            D M  K   PN+ T+++L++    E    D       ++ N +V    ++N VID + K
Sbjct: 355 FDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGK 414

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G +DE  +I  +M+E+   PD  T+ I+I      GR+ +A+  FN+M+ +G  P+ I 
Sbjct: 415 RGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIV 474

Query: 545 VNSLI 549
            +SLI
Sbjct: 475 YHSLI 479



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 202/434 (46%), Gaps = 35/434 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N  M SLC+ G        FD M + GH PN       +      G       L +  
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM 393

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     ++N +++A  K+   DE + +F +       PD  T+ I+I   SR+G +
Sbjct: 394 EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRL 453

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M + G  P+ + Y++LI G C    + +  EL+ E+  +    P++V + S
Sbjct: 454 ADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNS 513

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK G++ +A  I++ +   G +P  +TFN LIDG+G VG +  A  + + M+S G
Sbjct: 514 IINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAG 573

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN------------ 445
             PDVV++++LIDGYCRNG+++ GL L  EM  K + P   T+ I+++            
Sbjct: 574 IEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 446 -----------------------ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                                   LC+ N  ++A    K+L   ++     + N +ID  
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAM 693

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K    +EA  +   +      P+  T+ ++I     +G + EA ++F+ M + GCAP  
Sbjct: 694 YKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSS 753

Query: 543 ITVNSLISCLLKGG 556
             +N +I  LL+ G
Sbjct: 754 RLLNYIIRVLLEKG 767



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 180/371 (48%), Gaps = 2/371 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + +N+V+ +  + G+ D   ++F  M+  G +P++      +++  R G+   A    +Q
Sbjct: 403 RVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQ 462

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIG 275
                +     +Y+SL+       N  +A  +  E   R   +P+   FN +I  L + G
Sbjct: 463 MIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEG 522

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V +A + F  +   G  PD++T+N+LI G   V ++ +   +L +    +   PDVV+Y
Sbjct: 523 RVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVL-DAMISAGIEPDVVSY 581

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I GYC+ G++D    ++ EM S G+KP+ +T+ +++ G    G  V A+ M   M+ 
Sbjct: 582 NTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D+ T   ++ G CRN   ++ + +  ++   N+  N+     +I+A+ K  +  +
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREE 701

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+     +    LVP    Y  +I    K G+V+EA+ + + ME+  C P       +I 
Sbjct: 702 AKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIR 761

Query: 516 GHCMKGRMVEA 526
               KG +V+A
Sbjct: 762 VLLEKGEIVKA 772



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 173/398 (43%), Gaps = 2/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++      G       +F  M S G +PN      ++SS  + GK   A       
Sbjct: 299 TYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y+ LL+    +    + + +F          D   FNI+I    + G +
Sbjct: 359 AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMM 418

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +    F  M   G  PD  TY  +I+   R+  +A   +   ++       P+ + Y S
Sbjct: 419 DETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQM-IAMGLKPEGIVYHS 477

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGI-KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +I G+C  G + KA  + +EM S GI +P+ V FN +I+   K G +V A  + + ++  
Sbjct: 478 LIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI 537

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV+TF+SLIDGY   G++ +   + D M    + P+V ++  LI+  C+  R++D 
Sbjct: 538 GERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDG 597

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                ++    + P    Y  ++ G    G    A  +  EM E     D  T  I++ G
Sbjct: 598 LILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGG 657

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            C      EAI++F K+  +    +   +N++I  + K
Sbjct: 658 LCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYK 695



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 135/314 (42%), Gaps = 2/314 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P   T+NIL+    R       F  F      G   D++  + L+  L           L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDG 376
           L     +    PD ++Y +V+   C+  +  +A  + + M   S G  P+ VT+N +I G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             + G +  A  +   M+  G +PDVVT++S+ID  C+   +++   +  +M      PN
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T+  +I+      +  +     +++    L+P     N  +   CK G   EA     
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K  KP+ VT+++L+ G+  +G  V+ +++FN M   G   D    N +I    K G
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 557 MPNEAFRIMQRASE 570
           M +E   I  +  E
Sbjct: 417 MMDETMLIFTQMQE 430



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 139/338 (41%), Gaps = 35/338 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +V+ +   MG        F+ M + G  P   +    +      G    AK L+S+ 
Sbjct: 439 TYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEM 498

Query: 218 RPGEVTMSTFMY-NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               +     ++ NS++N+L K+    EA  +F     +  +PD  TFN LI G   +G+
Sbjct: 499 MSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK----------- 325
           ++KAF     M S G  PD+V+YNTLI G CR   +  G  L  E+  K           
Sbjct: 559 IEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGI 618

Query: 326 -----------------------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                                  S  + D+ T   ++ G C+    D+A  ++ ++ +  
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMN 678

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +K +    N +ID   KV     A+ + + + + G +P+  T+  +I    + G + +  
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEAD 738

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
            +   M+    +P+      +I  L ++  +  A  ++
Sbjct: 739 NMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYM 776


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 220/437 (50%), Gaps = 23/437 (5%)

Query: 156 FKTYNLVMRSLC---EMGLHDSVQV---VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+ + S+C   E+   D + +   V++ M +   + N      F       GK D 
Sbjct: 379 YVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDK 438

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++           T  Y+ ++  L +    ++A  +F+E   +   PD +T+ ILI 
Sbjct: 439 AFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              ++G +++A  +F +M S GCSP +VTY  L+    +  +V +  ++   +   +  +
Sbjct: 499 SFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRM-VDAGCA 557

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+ +TY++++ G CK G+  KA  +Y +M                ++  I P+ VT+  L
Sbjct: 558 PNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGAL 617

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           IDG  K   +V A+ + + M S G  P+ + + +LIDG+C+ G+L+   ++   M     
Sbjct: 618 IDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGY 677

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P V+T+T LI+A+ K+ RL+ A + L Q+  +   P    Y  +IDG C+ G   +A  
Sbjct: 678 LPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALK 737

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +++ ME++ C P+ VT+T LI G    G++  ++ +F +M+  GCAP+ +T   LI+   
Sbjct: 738 LLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCC 797

Query: 554 KGGMPNEAFRIMQRASE 570
             G+ +EA  ++    +
Sbjct: 798 AAGLLDEAHSLLSEMKQ 814



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 220/511 (43%), Gaps = 92/511 (18%)

Query: 145 FSRVNLSLNHSF----KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           F  + L +   F     TY+ V+  LCE    +   ++F  M+S G +P+       + S
Sbjct: 440 FQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDS 499

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             + G  + A+    +      + S   Y +LL+A +K     +A  +F         P+
Sbjct: 500 FCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPN 559

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDM----------------GSFGCSPDIVTYNTLIS 304
           T T++ L+ GL + GE +KA E +  M                 +   +P++VTY  LI 
Sbjct: 560 TITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALID 619

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+ ++V    ELL +V   +   P+ + Y ++I G+CK+GK+D A  ++  M+ CG  
Sbjct: 620 GLCKAHKVVDAQELL-DVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL 678

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+  T+  LID   K   +  A  +  +ML     P+VVT++++IDG CR G+  + LKL
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKL 738

Query: 425 CDEMKGKNLSPNVYTFT-----------------------------------ILINALCK 449
              M+ +  +PNV T+T                                   +LIN  C 
Sbjct: 739 LSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCA 798

Query: 450 ENRLNDARRFLKQLK---WNDLV----------PKPFM--------------------YN 476
              L++A   L ++K   W   V           K F+                    Y 
Sbjct: 799 AGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYG 858

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCK---PDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            +ID F KAG +++A  +  EM E         K T+T LI   C+  ++ +A  +++++
Sbjct: 859 LLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEI 918

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            R G  P+      LI  L+K    NEA ++
Sbjct: 919 TRKGVVPELSAFICLIKGLIKVNKWNEALQL 949



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 195/479 (40%), Gaps = 39/479 (8%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           + V++ +  P+L ++F  ++   +  +H+   YN +   L       + + +   +  D 
Sbjct: 108 VAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIGEDD 167

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
                 ++   V  C R G    A   L + +      S   YN+L+  L      D   
Sbjct: 168 REVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGF 227

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGE------------------------------ 276
            + KE   L    D +T     Q L + G                               
Sbjct: 228 RVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEA 287

Query: 277 --VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
               +A  F + M    C P++VTY TL++G  +  ++     ++  +      +P+   
Sbjct: 288 SLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIIS-MMMNEGCNPNPSL 346

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS------AEY 388
           + S++  YC       A  + N M  CG  P  V +N+ I        + S      AE 
Sbjct: 347 FNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEK 406

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E ML+   + + V  ++     C  G+ ++  ++   M  K   P+  T++ +I  LC
Sbjct: 407 VYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLC 466

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +  ++  A    +++K   ++P  + Y  +ID FCK G +++A     EME   C P  V
Sbjct: 467 EAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVV 526

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T+T L+  +    ++ +A  IF++M+  GCAP+ IT ++L+  L K G   +A  +  +
Sbjct: 527 TYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAK 585



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 163/374 (43%), Gaps = 8/374 (2%)

Query: 169 MGLHDSV--QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           +G  D+V     F+   +D   PN       +    +A K   A+ LL          + 
Sbjct: 587 IGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNH 646

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
            +Y++L++   K    D A  +F    +    P   T+  LI  + +   +  A +    
Sbjct: 647 IIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQ 706

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M    C+P++VTY  +I GLCR+ E  +  +LL  ++ K   +P+VVTYTS+I G  K G
Sbjct: 707 MLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMME-KRGCNPNVVTYTSLIDGLGKSG 765

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+D +  ++ +M + G  P+ VT+ VLI+     G +  A  +   M    +   V  + 
Sbjct: 766 KVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYC 825

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           S++ G+ +  +    L L +E++   +      + +LI++  K  RL  A    K++   
Sbjct: 826 SVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEV 883

Query: 467 DL---VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                +     Y  +I   C A  +++A  + +E+  K   P+   F  LI G     + 
Sbjct: 884 SSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKW 943

Query: 524 VEAISIFNKMLRIG 537
            EA+ +   M   G
Sbjct: 944 NEALQLCYSMCDEG 957



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 6/214 (2%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N +  TY  ++  L + G  D    +F  M + G  PN       ++ C  AG  D A  
Sbjct: 748 NPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHS 807

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LLS+ +          Y S++    K+  A   +    E   + S      + +LI   S
Sbjct: 808 LLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAP--VYGLLIDSFS 865

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIV---TYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           + G ++KA E   +M     S +I    TY +LI  LC  +++ +  EL  E+  K    
Sbjct: 866 KAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKG-VV 924

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           P++  +  +I G  K+ K ++A  +   M   G+
Sbjct: 925 PELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 216/486 (44%), Gaps = 80/486 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY   ++ +C  G  D    +   M + G  PN  +    + + ++  +   A  +L + 
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +   TF YNSL+  L K    DEA     E      +PD +T+   I G    GE 
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 278 KKAFEFFYDMGSFGCSP-----------------------------------DIVTYNTL 302
             A ++  +M   G  P                                   D  TY  L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ++GL +  +V    E+  E++ K   +PDV +Y ++I G+ KLG M KA+ I++EM   G
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKG-IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG 660

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  + + +N+L+ GF + G +  A+ + + M   G+ P+ VT+ ++IDGYC++G L +  
Sbjct: 661 LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR------------------FLKQLK 464
           +L DEMK K L P+ + +T L++  C   RLND  R                  F   + 
Sbjct: 721 QLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDVERAITIFETNEKGCASSSAPFNALIN 777

Query: 465 W----------NDLV-------------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           W           D++             P    YN +ID  CK GN++ A  +   M++ 
Sbjct: 778 WVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKA 837

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              P  +T+T L+ G+   GR  E  S+F++++  G  PD+I  + +I+  LK GM  +A
Sbjct: 838 NLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKA 897

Query: 562 FRIMQR 567
             ++ +
Sbjct: 898 LVLLDQ 903



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 208/434 (47%), Gaps = 5/434 (1%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           KRL++ K  L  +E + V L  ++    Y++++  L +    D+   +   M S G   +
Sbjct: 294 KRLEDAKSLL--VEMNSVGLFADNV--AYSILIDGLLKGRNADAANGLVHEMVSHGFSID 349

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             M ++F+    + G  + AK L        VT     Y SL+    ++ N  +   +  
Sbjct: 350 PMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLV 409

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E  +       +T+   ++G+   G++  A+    +MG+ GC P++V Y TLI    + +
Sbjct: 410 EIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKS 469

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
                  +LKE++ +   +PD   Y S+I G  K  KMD+A     EM   G KP A T+
Sbjct: 470 RFGDAVRVLKEMR-EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
              I G+ + G   SA+   + ML  G +P+ V  + LI+ YC+ G++ +       M  
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + +  +  T+T+L+N L K  ++NDA     +++   + P  F Y  +IDGF K GN+ +
Sbjct: 589 QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQK 648

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A+ I  EM +     + + + +L+ G C  G + +A  + ++M   G  P+ +T  ++I 
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIID 708

Query: 551 CLLKGGMPNEAFRI 564
              K G   EAF++
Sbjct: 709 GYCKSGDLAEAFQL 722



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 181/386 (46%), Gaps = 15/386 (3%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           F  M   G L ++      ++  ++ GK + A+ +  + R   +    F Y +L++   K
Sbjct: 583 FRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSK 642

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
             N  +A  +F E  +     +   +N+L+ G  R GE++KA E   +M   G  P+ VT
Sbjct: 643 LGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVT 702

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y T+I G C+  ++A   +L  E+K K    PD   YT+++ G C+L  +++A  I+ E 
Sbjct: 703 YCTIIDGYCKSGDLAEAFQLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERAITIF-ET 760

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS-----FGYLPDVVTFSSLIDGYC 413
           N  G   S+  FN LI+   K G       M  R++      FG  P+ VT++ +ID  C
Sbjct: 761 NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGK-PNDVTYNIMIDYLC 819

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G L    +L   M+  NL P V T+T L+N   K  R ++      ++    + P   
Sbjct: 820 KEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNI 879

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI-----LIIGHCMKGRMVEAIS 528
           MY+ +I+ F K G   +A V++ +M  K    D    +I     L+ G    G M  A  
Sbjct: 880 MYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 939

Query: 529 IFNKMLRIGCAPDDITVNSLI--SCL 552
           +   M+R+   PD  TV  LI  SC+
Sbjct: 940 VVENMVRLKYIPDSSTVIELINESCI 965



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 198/422 (46%), Gaps = 19/422 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGL 213
           TY   +    E G   S       M   G +PN  +    ++   + GK    C A + +
Sbjct: 527 TYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSM 586

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           + Q   G+       Y  L+N LVK    ++A  +F E       PD +++  LI G S+
Sbjct: 587 VEQGILGDAKT----YTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSK 642

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G ++KA   F +M   G + +++ YN L+ G CR  E+ +  ELL E+  K  F P+ V
Sbjct: 643 LGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKG-FPPNAV 701

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++I GYCK G + +A  +++EM   G+ P +  +  L+DG  ++ ++  A  + E  
Sbjct: 702 TYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN 761

Query: 394 LSFGYLPDVVTFSSLIDGYCRNG--QLNQGL--KLCDEMKGKNLSPNVYTFTILINALCK 449
              G       F++LI+   + G  +L   +  +L D    K   PN  T+ I+I+ LCK
Sbjct: 762 EK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCK 820

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E  L  A+     ++  +L+P    Y  +++G+ K G   E   +  E+     +PD + 
Sbjct: 821 EGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIM 880

Query: 510 FTILIIGHCMKGRMVEAISIFNKM-----LRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ++++I     +G   +A+ + ++M     +  GC     T  +L+S   K G    A ++
Sbjct: 881 YSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 940

Query: 565 MQ 566
           ++
Sbjct: 941 VE 942



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 185/457 (40%), Gaps = 45/457 (9%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           KR+D+P   L F               +++ +   LC  G  +    V   M        
Sbjct: 72  KRVDDPSKLLSFFNLVDSQKVTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIE----RK 127

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
            P+ E + SS +R          L +F  G+      ++  L++  +++   DEAV++F 
Sbjct: 128 WPVAEVW-SSIVRC---------LREF-VGKSDDRVLLFGILIDGYIEKGFLDEAVFVFS 176

Query: 251 EY--FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                 L   P     N L+  L +   +   ++ +  M       D+ +Y  LI   CR
Sbjct: 177 STKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCR 236

Query: 309 VNEVARGHELLKEVKFKSE------------------------FSPDVVTYTSVISGYCK 344
              V    +L K+V  K+E                          P   +Y  +I G CK
Sbjct: 237 DGNV----QLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCK 292

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
             +++ A  +  EMNS G+    V +++LIDG  K  N  +A  +   M+S G+  D + 
Sbjct: 293 QKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMM 352

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +   I    + G + +   L D M    ++P    +  LI    +E  +      L ++K
Sbjct: 353 YDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIK 412

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
             ++V  P+ Y   + G C +G++D A  IV EM    C+P+ V +T LI     K R  
Sbjct: 413 KRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFG 472

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +A+ +  +M   G APD    NSLI  L K    +EA
Sbjct: 473 DAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEA 509


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 200/398 (50%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++  L + G  D    +++ M   GH+P + +    + S  + G+ +    +  + 
Sbjct: 231 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 290

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N+ ++ + K    ++   +F+E       PD  +++ILI GL + G  
Sbjct: 291 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 350

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            + +E FY M   GC  D   YN +I G C+  +V + ++LL+E+K K    P VVTY S
Sbjct: 351 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH-PPTVVTYGS 409

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+ ++D+A  ++ E  S GIK + V ++ LIDGFGKVG +  A  + E ++  G
Sbjct: 410 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 469

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ L+D   +  ++N+ L     MK     PN  T++ILIN LC+  + N A 
Sbjct: 470 LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAF 529

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++   L P    Y  +I G  KAGN+ EA+ + +  +     PD  ++  +I G 
Sbjct: 530 VFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 589

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
               + ++A ++F +    GC     T   L+  L K 
Sbjct: 590 SSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 627



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 198/410 (48%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  ++   + D M   G  PN   +   +    +A K + A  +    
Sbjct: 161 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 220

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   ++SL++ L K    D+A  ++++       P    +  LI+   + G  
Sbjct: 221 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRK 280

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   + + +M   GCSPD+   NT +  + +  E  +G  L +E+     F PD  +Y+ 
Sbjct: 281 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG-FIPDARSYSI 339

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K G  ++   ++  M   G       +N +IDGF K G +  A  + E M   G
Sbjct: 340 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 399

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P VVT+ S+IDG  +  +L++   L +E K   +  NV  ++ LI+   K  R+++A 
Sbjct: 400 HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAY 459

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +++L    L P  + +N ++D   KA  ++EA +    M++ +C P+++T++ILI G 
Sbjct: 460 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 519

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   +  +A   + +M ++G  P+ IT  ++IS L K G   EA  +  R
Sbjct: 520 CRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSR 569



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 195/402 (48%), Gaps = 2/402 (0%)

Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS 225
           LC+    D    +F+ +  +  +P +      +     AGK D A GLL + +      S
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
              YN +L  L K+   +EA+ +F+E  R  + P+  T+NILI  L R G++  A E   
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           DM   G  P+++T N +I  LC+  ++     + + +  K   +P+ VT++S+I G  K 
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV-CTPNAVTFSSLIDGLGKC 242

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G++D A  +Y +M  CG  P A+ +  LI  F K G       + + M+  G  PD+   
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           ++ +D   + G+  +G  L  E+      P+  +++ILI+ L K    N+       +K 
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
              V     YN VIDGFCK+G V++A  ++ EM+ K   P  VT+  +I G     R+ E
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           A  +F +    G   + +  +SLI    K G  +EA+ IM+ 
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 178/396 (44%), Gaps = 12/396 (3%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN------- 234
           M   G  P+S +    V++C+++ K   A  ++   R  +   +   Y  L+        
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 235 ---ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
               L K N  DEAV +F++  +    P  + +N +I G    G+  +A+       + G
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P ++ YN +++ L +   V     + +E+  K +  P+V TY  +I   C+ GK++ A
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEM--KRDAVPNVPTYNILIDMLCREGKLNAA 178

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             I ++M   G+ P+ +T N++ID   K   +  A  + E M      P+ VTFSSLIDG
Sbjct: 179 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 238

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
             + G+++    L ++M      P    +T LI +  K  R  D  +  K++      P 
Sbjct: 239 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 298

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
             + N  +D   KAG  ++   +  E+      PD  +++ILI G    G   E   +F 
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            M   GC  D    N++I    K G  N+A+++++ 
Sbjct: 359 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 394



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 151/300 (50%), Gaps = 1/300 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++Y++++  L + GL +    +F  M+  G + ++      +    ++GK + A  LL +
Sbjct: 335 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 394

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +      +   Y S+++ L K +  DEA  +F+E      + +   ++ LI G  ++G 
Sbjct: 395 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 454

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A+    ++   G +P++ T+N L+  L +  E+       + +K   +  P+ +TY+
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK-DLKCPPNQITYS 513

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G C++ K +KA   + EM   G+KP+ +T+  +I G  K GN++ A  +  R  + 
Sbjct: 514 ILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKAN 573

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD  +++++I+G     +      L +E + K  + +  T  +L++AL K   L  A
Sbjct: 574 GGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 14/185 (7%)

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN----------A 446
           G+ P       L+    ++ +L +   +   M+     P    +TILI            
Sbjct: 5   GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK NRL++A    +QL+ N  VP  + YN +I G+  AG  DEA  ++   + K   P 
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI-- 564
            + +  ++     K R+ EA+ IF +M R    P+  T N LI  L + G  N A  I  
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 565 -MQRA 568
            M+RA
Sbjct: 184 DMERA 188



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%)

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CKA  +DEA  +  ++E+ R  P    +  +I+G+   G+  EA  +  +    G  P 
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
            I  N +++CL K     EA RI +    D    +P++
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTY 162


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 215/465 (46%), Gaps = 46/465 (9%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L ++H+  TYN+++   C          +   M   G+ P+   +   ++      +   
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173

Query: 210 AKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           A  L+ Q     +RP  +T +T     L++ L   N A EAV +     +   QP+  T+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTT-----LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            +++ GL + G++  AF     M +     ++V Y+T+I  LC+         L  E++ 
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    P+V+TY+S+IS  C   +   A+ + ++M    I P+ VTFN LID F K G +V
Sbjct: 289 KG-VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            AE + + M+     PD+ T+SSLI+G+C + +L++   + + M  K+  PNV T+  LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407

Query: 445 NALCKENRLNDARRFLKQLKWNDLV----------------------------------- 469
           N  CK  R+++     +++    LV                                   
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN ++DG CK G +++A V+   ++  + +P   T+ I+I G C  G++ +   +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           F  +   G  PD I  N++IS   + G+  EA  + ++  ED  L
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 208/418 (49%), Gaps = 14/418 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
           +N ++ ++ +M   D V  + + M+  G   N       ++   R  +   A  LL +  
Sbjct: 88  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
              + P  VT+S     SLLN         +AV +  +   +  +PDT TF  LI GL  
Sbjct: 148 KLGYEPSIVTLS-----SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             +  +A      M   GC P++VTY  +++GLC+  ++     LL +++  ++   +VV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-AAKIEANVV 261

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y++VI   CK    D A  ++ EM + G++P+ +T++ LI           A  +   M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +     P+VVTF++LID + + G+L +  KL DEM  +++ P+++T++ LIN  C  +RL
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A+   + +   D  P    YN +I+GFCKA  +DE   +  EM ++    + VT+T L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRA 568
           I G         A  +F +M+  G  P+ +T N+L+  L K G   +A   F  +QR+
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 184/369 (49%), Gaps = 1/369 (0%)

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           + + K D A GL           S F +N LL+A+ K    D  + + ++  RL    + 
Sbjct: 61  LHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL 120

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T+NILI    R  ++  A      M   G  P IVT ++L++G C    ++    L+ +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  +  + PD +T+T++I G     K  +A  + + M   G +P+ VT+ V+++G  K G
Sbjct: 181 M-VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           ++  A  +  +M +     +VV +S++ID  C+    +  L L  EM+ K + PNV T++
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ LC   R +DA R L  +    + P    +N +ID F K G + EA  +  EM ++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              PD  T++ LI G CM  R+ EA  +F  M+   C P+ +T N+LI+   K    +E 
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419

Query: 562 FRIMQRASE 570
             + +  S+
Sbjct: 420 VELFREMSQ 428



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 116/240 (48%), Gaps = 16/240 (6%)

Query: 329 SPDVVTYTSVISGYCKLGK-MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           +P +   +  + G C  G+     +G Y E+   G+         L D  G  G MV + 
Sbjct: 26  NPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMK-----LDDAIGLFGGMVKSR 80

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                      LP +  F+ L+    +  + +  + L ++M+   +S N+YT+ ILIN  
Sbjct: 81  P----------LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+ ++++ A   L ++      P     + +++G+C    + +A  +V +M E   +PD 
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +TFT LI G  +  +  EA+++ ++M++ GC P+ +T   +++ L K G  + AF ++ +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 106/237 (44%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           FS     Y  ++       K+D A G++  M      PS   FN L+    K+       
Sbjct: 46  FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E+M   G   ++ T++ LI+ +CR  Q++  L L  +M      P++ T + L+N  
Sbjct: 106 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C   R++DA   + Q+      P    +  +I G        EA  +V  M ++ C+P+ 
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           VT+ +++ G C +G +  A ++ NKM       + +  +++I  L K    ++A  +
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282



 Score = 42.0 bits (97), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 46/106 (43%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G  +   VVF+Y++     P        +    +AGK +    L    
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
               V     +YN++++   ++   +EA  +F++       PD+ T
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 227/498 (45%), Gaps = 48/498 (9%)

Query: 115 RYLCEKLSPLNS------LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
           R+   +  PL +      L  ++   +P   L+ L  +          + Y  ++R L  
Sbjct: 27  RWRASRHGPLRAAGQEQLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGA 86

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC---DAAKGLLSQFRP-GEVTM 224
           +G  D ++V+   MR +GH     ++  F+ S    G+    DA   +L+Q +P   +  
Sbjct: 87  VGALDLMKVLVAEMRREGHQVKLGVVHSFLDS--YEGQQLFDDAVDLILNQLQPLFGIQA 144

Query: 225 STFMYNSLLNALV-----------------------------------KQNNADEAVYMF 249
            T +YN LLN LV                                   + +    AV M 
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           +E       PD  TF  L+QG    G ++ A      M   GCS   VT N LI+G C++
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             V      +++ +    F PD +TY + ++G C+   +  A  + + M   G  P   T
Sbjct: 265 GRVEDALGYIQQ-EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N++++   K G +  A+ +  +M+  G LPD+ TF++LI   C   +L + L L  ++ 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K +SP+VYTF ILINALCK    + A R  +++K +   P    YN +ID  C  G + 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  ++ +ME   C    +T+  +I G C K R+ EA  +F++M   G + + IT N+LI
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 550 SCLLKGGMPNEAFRIMQR 567
             L K    ++AF ++ +
Sbjct: 504 DGLCKDKKIDDAFGLINQ 521



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 47/449 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T+  +M+   E G  ++   V   M   G       +   ++   + G+ + A G + Q 
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P ++T     YN+ +N L + ++   A+ +     +    PD +T+NI++  L 
Sbjct: 278 IADGFEPDQIT-----YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G++++A      M   GC PDI T+NTLI+ LC  N +    +L ++V  K   SPDV
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG-VSPDV 391

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +I+  CK+G    A  ++ EM + G  P  VT+N LID    +G +  A  + + 
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 451

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G     +T++++IDG C+  ++ +  ++ D+M  + +S N  TF  LI+ LCK+ +
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA   + Q+    L P    YN ++  +CK G++ +A  I+  M     + D VT+  
Sbjct: 512 IDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 513 LIIGHCMKGR-----------------------------------MVEAISIFNKMLRIG 537
           LI G C  GR                                   + +A+S+F +M  +G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631

Query: 538 CAPDDITVNSLISCLLKGGMP-NEAFRIM 565
             PD +T   +   L +GG P  EAF  M
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFM 660



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 3/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++  L E      ++ V+  M + G  P+       + +  RA +   A  +L + 
Sbjct: 148 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 207

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      + +L+   V++ + + A+ +      +       T N+LI G  ++G V
Sbjct: 208 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL-LKEVKFKSEFSPDVVTYT 336
           + A  +     + G  PD +TYNT ++GLC+ + V  GH L + +V  +    PDV TY 
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV--GHALKVMDVMVQEGHDPDVFTYN 325

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            V++  CK G++++A GI N+M   G  P   TFN LI        +  A  +  ++   
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV TF+ LI+  C+ G  +  L+L +EMK    +P+  T+  LI+ LC   +L  A
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              LK ++          YN +IDG CK   ++EA  +  +M+ +    + +TF  LI G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C   ++ +A  + N+M+  G  P++IT NS+++   K G   +A  I++
Sbjct: 506 LCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 555



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 199/409 (48%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +M++LC      +  ++ + M S G  P+       +   +  G  +AA  + ++ 
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +    N L+N   K    ++A+   ++      +PD  T+N  + GL +   V
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   G  PD+ TYN +++ LC+  ++     +L ++  +    PD+ T+ +
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL-PDITTFNT 361

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C   ++++A  +  ++   G+ P   TFN+LI+   KVG+   A  + E M + G
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+++LID  C  G+L + L L  +M+      +  T+  +I+ LCK+ R+ +A 
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q+    +      +N +IDG CK   +D+A  ++ +M  +  +P+ +T+  ++  +
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHY 541

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C +G + +A  I   M   G   D +T  +LI+ L K G    A ++++
Sbjct: 542 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 590



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 119/242 (49%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              D V Y  +++   +  KM     +Y+EM + GIKP  VTFN L+    +   + +A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M E M S G  PD  TF++L+ G+   G +   L++   M     S    T  +LIN  
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  R+ DA  +++Q   +   P    YN  ++G C+  +V  A  ++  M ++   PD 
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+ I++   C  G++ EA  I N+M+  GC PD  T N+LI+ L  G    EA  + ++
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 381

Query: 568 AS 569
            +
Sbjct: 382 VT 383



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 16/216 (7%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P    +  +I   G VG +   + +   M   G+   +    S +D Y       +G +L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSY-------EGQQL 124

Query: 425 CDE---MKGKNLSP------NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            D+   +    L P      +   +  L+N L + +++        ++    + P    +
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N ++   C+A  V  A +++ EM  +   PD+ TFT L+ G   +G +  A+ +  +ML 
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +GC+   +TVN LI+   K G   +A   +Q+   D
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 200/395 (50%), Gaps = 1/395 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +TY +++++LC+ GL D    +FD M + G  PN       +    R GK + A G+ 
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  S   YN+L+N   K      A  +     +   +P+  TFN L++GL R+
Sbjct: 360 RKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+  KA      M   G SPDIV+YN LI GLCR   +   ++LL  +    +  PD +T
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMN-SFDLEPDCLT 478

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +T++I+ +CK GK D A+     M   GI    VT   LIDG   VG    A ++ E ++
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLV 538

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
               L    + + ++D   +  +L + L +  ++    L P+V T+T L++ L +   ++
Sbjct: 539 KMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIS 598

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            + R L+ +K +  +P  + Y  +I+G C+ G V+EA  +++ M++    P+ VT+T+++
Sbjct: 599 GSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            G+   G++  A+     M+  G   +D   +SL+
Sbjct: 659 KGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 207/414 (50%), Gaps = 2/414 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           ++  Y+ ++ SL ++ L     V +  M +DG +         V++  + G  +AA+  +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSR 273
            +       + + +  SLL    +  N  +A+ +F    R  +  P++ +++ILI GL  
Sbjct: 219 CKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCE 278

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G +++AF     MG  GC P   TY  LI  LC    + +   L  E+  +    P+V 
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG-CKPNVH 337

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TYT +I G C+ GK+++A G+  +M   GI PS +T+N LI+G+ K G +V A  +   M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                 P+V TF+ L++G CR G+  + + L   M    LSP++ ++ +LI+ LC+E  +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           N A + L  +   DL P    +  +I+ FCK G  D A+  +  M  K    D+VT T L
Sbjct: 458 NVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           I G C  G+  +A+ I   ++++       ++N ++  L KG    E   ++ +
Sbjct: 518 IDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGK 571



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 4/351 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFK-EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           Y +++NAL K N   EA  MF  +  ++    D+     L+ G  R   ++ A + F  M
Sbjct: 198 YRTIVNALCK-NGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLM 256

Query: 288 GSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
              G C+P+ V+Y+ LI GLC V  +     L  ++  K    P   TYT +I   C  G
Sbjct: 257 SREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRG 315

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +DKA  +++EM + G KP+  T+ VLIDG  + G +  A  +  +M+  G  P V+T++
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +LI+GYC++G++    +L   M+ +   PNV TF  L+  LC+  +   A   LK++  N
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            L P    YN +IDG C+ G+++ A  ++  M     +PD +TFT +I   C +G+   A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
            +    MLR G + D++T  +LI  +   G   +A  I++   + + L  P
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTP 546



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 1/246 (0%)

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E++  S F  +   Y+S++    KL     A   Y  M + G     + +  +++   K 
Sbjct: 149 ELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKN 208

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYT 439
           G   +AE    ++L  G+L D    +SL+ G+CR   L   LK+ D M +    +PN  +
Sbjct: 209 GYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVS 268

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ILI+ LC+  RL +A     Q+      P    Y  +I   C  G +D+A  +  EM 
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            + CKP+  T+T+LI G C  G++ EA  +  KM++ G  P  IT N+LI+   K G   
Sbjct: 329 ARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVV 388

Query: 560 EAFRIM 565
            AF ++
Sbjct: 389 PAFELL 394



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/461 (20%), Positives = 198/461 (42%), Gaps = 31/461 (6%)

Query: 117 LCEKLSPLNSLEVIKR-LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
           LC    P  ++ ++KR LDN                L+    +YN+++  LC  G  +  
Sbjct: 416 LCRVGKPYKAVHLLKRMLDN---------------GLSPDIVSYNVLIDGLCREGHMNVA 460

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
             +   M S    P+       +++  + GK D A   L       +++      +L++ 
Sbjct: 461 YKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           +       +A+++ +   ++       + N+++  LS+  ++K+       +   G  P 
Sbjct: 521 VCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPS 580

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +VTY TL+ GL R  +++    +L+ +K  S   P+V  YT +I+G C+ G++++A  + 
Sbjct: 581 VVTYTTLVDGLIRSGDISGSFRMLELMKL-SGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           + M   G+ P+ VT+ V++ G+   G +  A      M+  GY  +   +SSL+ G+  +
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLS 699

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTF--------TILINALCKENRLNDARRFLKQ-LKWN 466
               +G++  D    K L   V             L+  LCKE R +++   ++  LK  
Sbjct: 700 ---QKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSG 756

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             + K    + +++ +C      +   ++  + +    P   +F ++I G   +G    A
Sbjct: 757 VFLEKAI--DIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERA 814

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +  ++L      +   V   + CL++ G  +E   ++ +
Sbjct: 815 RELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVIDLVDQ 855


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 193/359 (53%), Gaps = 5/359 (1%)

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +FR  E   S ++YN LL +  K+   D   ++ K+       P+T+TFN+LI  L   G
Sbjct: 11  RFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSG 70

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A E F  M   GC P+  ++  L+ G CR    ++G ELL E++ +  FSP+ V Y
Sbjct: 71  CLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMR-RLGFSPNKVVY 129

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++IS +CK GK D A  + +EM   G+ P  VTFN  I      G ++ A  +   M  
Sbjct: 130 NTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI 189

Query: 396 FGYL----PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
              L    P+++T++ ++ G+C+ G L +   L ++MK      N  ++ I +  L +  
Sbjct: 190 DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIG 249

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +L +A+  LK++    + P  + YN V+DG CK G + +A +++  M      PD VT+T
Sbjct: 250 KLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYT 309

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            L+ G+C  G++ EA ++  +M+R GC+P++ T N L+  L K G  +EA  ++Q+ +E
Sbjct: 310 TLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNE 368



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 191/381 (50%), Gaps = 5/381 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+  +    + SC + G+ D    L        V+  T+ +N L+  L      D+A  +
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F +      +P+ ++F IL++G  R G   K  E   +M   G SP+ V YNTLIS  C+
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI----K 364
             +     +L+ E++ K   SPDVVT+ + IS  C  GK+ +A+ I+ +M    +    +
Sbjct: 139 EGKTDDAEKLVDEMR-KDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ +T+N+++ GF K G +  A  + E+M     L +  +++  + G  R G+L +   +
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             EM    + PNVY++ I+++ LCK   L DAR  ++ +  + ++P    Y  ++ G+C 
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G V EAN ++ EM    C P+  T  IL+     +GR+ EA  +  KM   G   D +T
Sbjct: 318 TGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVT 377

Query: 545 VNSLISCLLKGGMPNEAFRIM 565
            N +I  L   G  ++A  I+
Sbjct: 378 CNIVIDGLCNNGKLDKAIEIV 398



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 192/447 (42%), Gaps = 58/447 (12%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ +  +  +YN+VM  LC+ G+    +++   M S G LP++      +      GK 
Sbjct: 262 VDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKV 321

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  +L +      + + +  N LL +L K+    EA  + ++        DT T NI+
Sbjct: 322 SEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIV 381

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFG-----------------------CSPDIVTYNTLIS 304
           I GL   G++ KA E    M + G                       C PD+++Y+T+IS
Sbjct: 382 IDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIIS 441

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+   V    +   E+  K+   PD   Y   I  +CK GK+  A  +  +M   G  
Sbjct: 442 GLCKAGRVGEAKKKFIEMMGKN-LQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCN 500

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
            +  T+N LI G G    +     + + M   G  PDV  +++++   C  G++     +
Sbjct: 501 KTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSV 560

Query: 425 CDEMKGKNLSPNVYTFTILINALCK-----------ENRLN--DARRFLKQLKWNDLVPK 471
            DEM  K +SPN+ +F+ILI A CK           E  LN    +  L  L +N+L+  
Sbjct: 561 LDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVG 620

Query: 472 P---------------------FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
                                 F+Y  +ID  CK   +D+A+ I+ ++ +K    D  +F
Sbjct: 621 GEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASF 680

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIG 537
             +I G   +G   EA  +  KM+ + 
Sbjct: 681 MPVIDGLGKRGNKHEADELAEKMMEMA 707



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 198/449 (44%), Gaps = 30/449 (6%)

Query: 145 FSRVNLSLN-HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           F ++ +S N  + ++YN+ +  L  +G     Q+V   M   G  PN       +    +
Sbjct: 223 FEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCK 282

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G    A+ L+       V   T  Y +LL+         EA  + +E  R    P+ +T
Sbjct: 283 NGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYT 342

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE------ 317
            NIL+  L + G + +A E    M   G   D VT N +I GLC   ++ +  E      
Sbjct: 343 CNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMW 402

Query: 318 ----------------LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                           L+ +   + +  PD+++Y+++ISG CK G++ +A   + EM   
Sbjct: 403 THGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK 462

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            ++P +  ++V I  F K G + SA  + + M   G    + T++SLI G     Q+ + 
Sbjct: 463 NLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEI 522

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             L DEM+ + +SP+V  +  ++++LC+  R+ DA   L ++    + P    ++ +I  
Sbjct: 523 YGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKA 582

Query: 482 FCKAGN---VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           FCKA +   VDE   I   +   +     +TF  L++G    G +V+A  +F   L    
Sbjct: 583 FCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVG----GEVVKAKELFETALDRSF 638

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQR 567
              +     LI  L K    ++A  I+ +
Sbjct: 639 DVGNFLYKDLIDHLCKDEKLDDASGILHK 667



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 89/178 (50%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P +  ++ L+    + G+++    LC +M    +SP  YTF +LI  LC    L+DAR  
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++      P  + +  ++ G+C+AG   +   ++ EM      P+KV +  LI   C 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           +G+  +A  + ++M + G +PD +T N+ IS L   G   EA RI +    D+ L LP
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLP 196


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 181/343 (52%), Gaps = 3/343 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           S +  N++L ++VK    D +V+ F KE  +    PD  TFNILI  L   G  +K+   
Sbjct: 197 SVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G +P IVTYNT++   C+        ELL  +K K     DV TY  +I   C
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLC 314

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           +  ++ K   +  +M    I P+ VT+N LI+GF   G ++ A  +   MLSFG  P+ V
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           TF++LIDG+   G   + LK+   M+ K L+P+  ++ +L++ LCK    + AR F  ++
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           K N +      Y  +IDG CK G +DEA V++ EM +    PD VT++ LI G C  GR 
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             A  I  ++ R+G +P+ I  ++LI    + G   EA RI +
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 205/415 (49%), Gaps = 3/415 (0%)

Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            Y++++R     G+  DS+++ F  M   G  P+       + S +++G+  +    L +
Sbjct: 165 VYDILIRVYLREGMIQDSLEI-FRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               ++      +N L+N L  + + +++ Y+ ++  +    P   T+N ++    + G 
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            K A E    M S G   D+ TYN LI  LCR N +A+G+ LL++++ K    P+ VTY 
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR-KRMIHPNEVTYN 342

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I+G+   GK+  A+ + NEM S G+ P+ VTFN LIDG    GN   A  M   M + 
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P  V++  L+DG C+N + +        MK   +     T+T +I+ LCK   L++A
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L ++  + + P    Y+ +I+GFCK G    A  IV  +      P+ + ++ LI  
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            C  G + EAI I+  M+  G   D  T N L++ L K G   EA   M+  + D
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC  G  +    +   M   G+ P        +    + G+  AA  LL   
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V      YN L++ L + N   +   + ++  +    P+  T+N LI G S  G+V
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   +M SFG SP+ VT+N LI G           ++   ++ K   +P  V+Y  
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-LTPSEVSYGV 413

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK  + D A G Y  M   G+    +T+  +IDG  K G +  A  +   M   G
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+S+LI+G+C+ G+     ++   +    LSPN   ++ LI   C+   L +A 
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R  + +         F +N ++   CKAG V EA   +  M      P+ V+F  LI G+
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              G  ++A S+F++M ++G  P   T  SL+  L KGG   EA + ++
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 195/471 (41%), Gaps = 74/471 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+   C+ G   +   + D+M+S G   +       +    R+ +      LL   
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  +   YN+L+N    +     A  +  E       P+  TFN LI G    G  
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE--VARGHE------------------ 317
           K+A + FY M + G +P  V+Y  L+ GLC+  E  +ARG                    
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449

Query: 318 ---------------LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                          LL E+  K    PD+VTY+++I+G+CK+G+   A  I   +   G
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMS-KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508

Query: 363 IKPSAV-----------------------------------TFNVLIDGFGKVGNMVSAE 387
           + P+ +                                   TFNVL+    K G +  AE
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                M S G LP+ V+F  LI+GY  +G+  +   + DEM      P  +T+  L+  L
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK   L +A +FLK L          MYN ++   CK+GN+ +A  +  EM ++   PD 
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688

Query: 508 VTFTILIIGHCMKGRMVEAISIFNK--MLRIGCAPDDITVNSLISCLLKGG 556
            T+T LI G C KG+ V AI +F K    R    P+ +     +  + K G
Sbjct: 689 YTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAG 738



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 207/426 (48%), Gaps = 4/426 (0%)

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           RV LS N     Y+ ++ + C MG       +++ M  +GH  +       V+S  +AGK
Sbjct: 506 RVGLSPNGII--YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A+  +       +  +T  ++ L+N         +A  +F E  ++   P  +T+  
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L++GL + G +++A +F   + +   + D V YNTL++ +C+   +A+   L  E+  +S
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVS 385
              PD  TYTS+ISG C+ GK   A     E  + G + P+ V +   +DG  K G   +
Sbjct: 684 IL-PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
             Y RE+M + G+ PD+VT +++IDGY R G++ +   L  EM  +N  PN+ T+ IL++
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              K   ++ +    + +  N ++P     + ++ G C++  ++    I+     +  + 
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D+ TF +LI   C  G +  A  +   M  +G + D  T ++++S L +     E+  ++
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922

Query: 566 QRASED 571
              S+ 
Sbjct: 923 HEMSKQ 928



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 201/477 (42%), Gaps = 70/477 (14%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            T+N+++ SLC+ G     +     M SDG LPN+   +  ++    +G+   A  +  + 
Sbjct: 550  TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   + F Y SLL  L K  +  EA    K    + +  DT  +N L+  + + G +
Sbjct: 610  TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV-----------ARGHELLKEVK--- 323
             KA   F +M      PD  TY +LISGLCR  +            ARG+ L  +V    
Sbjct: 670  AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 729

Query: 324  ----------------FKSEF-----SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                            F+ +      +PD+VT  ++I GY ++GK++K   +  EM +  
Sbjct: 730  FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 789

Query: 363  IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
              P+  T+N+L+ G+ K  ++ ++  +   ++  G LPD +T  SL+ G C +  L  GL
Sbjct: 790  GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849

Query: 423  KLCDEMKGKNLSPNVYTFTILINALC---------------------------------- 448
            K+      + +  + YTF +LI+  C                                  
Sbjct: 850  KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909

Query: 449  -KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
             + +R  ++R  L ++    + P+   Y  +I+G C+ G++  A V+  EM   +  P  
Sbjct: 910  NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969

Query: 508  VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            V  + ++      G+  EA  +   ML++   P   +  +L+    K G   EA  +
Sbjct: 970  VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 198/482 (41%), Gaps = 82/482 (17%)

Query: 178  VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            VFD M   GH P        +    + G    A+  L         + T MYN+LL A+ 
Sbjct: 605  VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664

Query: 238  KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDI 296
            K  N  +AV +F E  +    PD++T+  LI GL R G+   A  F  +  + G   P+ 
Sbjct: 665  KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724

Query: 297  VTYNTLISGLCRVNEVARGHELLKEVKFKSEF-----SPDVVTYTSVISGYCKLGKMDKA 351
            V Y   + G+ +  +   G      + F+ +      +PD+VT  ++I GY ++GK++K 
Sbjct: 725  VMYTCFVDGMFKAGQWKAG------IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778

Query: 352  TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
              +  EM +    P+  T+N+L+ G+ K  ++ ++  +   ++  G LPD +T  SL+ G
Sbjct: 779  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838

Query: 412  YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC----------------------- 448
             C +  L  GLK+      + +  + YTF +LI+  C                       
Sbjct: 839  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898

Query: 449  ------------KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV-------- 488
                        + +R  ++R  L ++    + P+   Y  +I+G C+ G++        
Sbjct: 899  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958

Query: 489  ---------------------------DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
                                       DEA +++  M + +  P   +FT L+   C  G
Sbjct: 959  EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 1018

Query: 522  RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKK 581
             ++EA+ +   M   G   D ++ N LI+ L   G    AF + +    D  L   +  K
Sbjct: 1019 NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1078

Query: 582  AV 583
            A+
Sbjct: 1079 AL 1080



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 175/431 (40%), Gaps = 37/431 (8%)

Query: 159  YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            YN ++ ++C+ G       +F  M     LP+S      +S   R GK   A     +  
Sbjct: 656  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715

Query: 219  P-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              G V  +  MY   ++ + K       +Y  ++   L   PD  T N +I G SR+G++
Sbjct: 716  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +K  +   +MG+    P++ TYN L+ G  +  +V+    L + +       PD +T  S
Sbjct: 776  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL-PDKLTCHS 834

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID----------GFGKVGNMVS-- 385
            ++ G C+   ++    I       G++    TFN+LI            F  V  M S  
Sbjct: 835  LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 894

Query: 386  ------------------AEYMRERMLSF-----GYLPDVVTFSSLIDGYCRNGQLNQGL 422
                                +   RM+       G  P+   +  LI+G CR G +    
Sbjct: 895  ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954

Query: 423  KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
             + +EM    + P     + ++ AL K  + ++A   L+ +    LVP    +  ++   
Sbjct: 955  VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 1014

Query: 483  CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            CK GNV EA  +   M     K D V++ +LI G C KG M  A  ++ +M   G   + 
Sbjct: 1015 CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1074

Query: 543  ITVNSLISCLL 553
             T  +LI  LL
Sbjct: 1075 TTYKALIRGLL 1085



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 66/150 (44%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            + Y  ++  LC +G   +  VV + M +    P +      V +  + GK D A  LL  
Sbjct: 935  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                ++  +   + +L++   K  N  EA+ +         + D  ++N+LI GL   G+
Sbjct: 995  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1054

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  AFE + +M   G   +  TY  LI GL
Sbjct: 1055 MALAFELYEEMKGDGFLANATTYKALIRGL 1084


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 224/456 (49%), Gaps = 20/456 (4%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           N  + +K L  S+  LSL  S  TYN +++  C+ G  D+ + +   M S G   N    
Sbjct: 382 NKAIEIKDLMVSK-GLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438

Query: 195 EFFVSSCIRAGKCDAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
              +         D+A     + LL    PG   ++T     L++ L K     +A+ ++
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT-----LISGLCKHGKHSKALELW 493

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            ++       DT T N L+ GL   G++ +AF    ++   GC  D V+YNTLISG C  
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++      L E+  K    PD  TY+ +I G   + K+++A   +++    G+ P   T
Sbjct: 554 KKLDEAFMFLDEM-VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           ++V+IDG  K       +   + M+S    P+ V ++ LI  YCR+G+L+  L+L ++MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K +SPN  T+T LI  +   +R+ +A+   ++++   L P  F Y  +IDG+ K G + 
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +   ++ EM  K   P+K+T+T++I G+   G + EA  + N+M   G  PD IT    I
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQ--LPSWKKAV 583
              LK G   EAF    + S+++N    +  W K +
Sbjct: 793 YGYLKQGGVLEAF----KGSDEENYAAIIEGWNKLI 824



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 10/390 (2%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           VF  + + G  P+       ++S +RA +    C+A   +     P       +++ + +
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSP-----DVYLFTTAI 267

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA  K    +EAV +F +       P+  TFN +I GL   G   +AF F   M   G  
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P ++TY+ L+ GL R   +   + +LKE+  K  F P+V+ Y ++I  + + G ++KA  
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           I + M S G+  ++ T+N LI G+ K G   +AE + + MLS G+  +  +F+S+I   C
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
            +   +  L+   EM  +N+SP     T LI+ LCK  + + A     Q      V    
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
             N ++ G C+AG +DEA  I  E+  + C  D+V++  LI G C K ++ EA    ++M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           ++ G  PD+ T + LI  L       EA +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 117/237 (49%), Gaps = 14/237 (5%)

Query: 338 VISGYCKLGKMDK---ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +I  YC   K D    A  ++  + + G+ PS  T N+L+       ++V A   ++   
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLT------SLVRANEFQKCCE 247

Query: 395 SF-----GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           +F     G  PDV  F++ I+ +C+ G++ + +KL  +M+   ++PNV TF  +I+ L  
Sbjct: 248 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R ++A  F +++    + P    Y+ ++ G  +A  + +A  ++ EM +K   P+ + 
Sbjct: 308 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 367

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  LI      G + +AI I + M+  G +    T N+LI    K G  + A R+++
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 424



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 14/171 (8%)

Query: 408 LIDGYCRNGQLNQ---GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           LI+ YC   + +     L +   +  K + P+  T  IL+ +L + N       F K  +
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE------FQKCCE 247

Query: 465 WNDLV-----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             D+V     P  +++   I+ FCK G V+EA  + ++MEE    P+ VTF  +I G  M
Sbjct: 248 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            GR  EA     KM+  G  P  IT + L+  L +     +A+ +++  ++
Sbjct: 308 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 358


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 214/429 (49%), Gaps = 17/429 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++  LC +         F  +   G+ PN       +       +   A  L  + 
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM 165

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY------FRLYSQPDTWTFNILIQGL 271
           +    T     Y +L+  L    N + A+ + +E       + +  +P+  T+NI++ GL
Sbjct: 166 QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGL 225

Query: 272 SRIGEVKKAFEFFYDMGSFG----------CSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            ++G   +A + F +M + G            PD+VT+N LI  LC+  +V    +LL  
Sbjct: 226 CKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLG- 284

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           V  +S   PD+VTY S+I G+C +G ++ A  ++  M S G +P  +++NVLI+G+ K  
Sbjct: 285 VMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTL 344

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +   ML  G  P+V+T+ SL+ G    G+++   KL   MK   ++ N YT+ 
Sbjct: 345 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG 404

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           I ++ LCK + L +A +   +LK ++   +    N +IDG CKAG ++ A  +  ++  +
Sbjct: 405 IFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             +P+ VT+TI+I G C +G++ +A  +  KM   GC PD IT N+L+    +     E 
Sbjct: 465 GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEV 524

Query: 562 FRIMQRASE 570
            +++ R ++
Sbjct: 525 VQLLHRMAQ 533



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 17/426 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA----KGL 213
           TYN +++ LC          +F  M+  G  P+       +      G  + A    + +
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200

Query: 214 LSQFRPGEVTM--STFMYNSLLNALVKQNNADEAVYMFKEY----------FRLYSQPDT 261
           L+     E+    +   YN +++ L K    DEA  +F+E                QPD 
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDM 260

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TFN+LI  L + G+V +A +    M   G  PD+VTYN+LI G C V ++    EL   
Sbjct: 261 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 320

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K    PDV++Y  +I+GY K  K+++A  +YNEM   G +P+ +T++ L+ G    G
Sbjct: 321 MPSKG-CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 379

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ +   M + G   +  T+   +DG C+N  L + +KL  E+K  N    +    
Sbjct: 380 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 439

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ LCK  +L  A    ++L      P    Y  +I GFC+ G VD+ANV++ +ME  
Sbjct: 440 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 499

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C PD +T+  L+ G     ++ E + + ++M +   +PD IT + ++  L K     E 
Sbjct: 500 GCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQEC 559

Query: 562 FRIMQR 567
             ++ R
Sbjct: 560 LHLLPR 565



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 207/452 (45%), Gaps = 35/452 (7%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           NP++          N++  H+   ++L+MRS                       P+    
Sbjct: 33  NPQIAFFLRHCKTGNVTATHALHFFHLMMRS--------------------TPTPSLSSF 72

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              +S   +         L +Q R   ++      N LLN L   N   E    F    R
Sbjct: 73  NHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILR 132

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNE 311
               P+  T+N LI+GL     + +A   F  M   GC+PD+VTY TLI GLC    +N 
Sbjct: 133 RGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINI 192

Query: 312 VARGH-ELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY----------NEMN 359
             + H E+L ++ +++    P+V+TY  ++ G CK+G+ D+A  ++          NEM 
Sbjct: 193 ALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEML 252

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G++P  VTFNVLID   K G ++ A+ +   M+  G +PD+VT++SLI+G+C  G LN
Sbjct: 253 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN 312

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
              +L   M  K   P+V ++ +LIN   K  ++ +A +   ++      P    Y+ ++
Sbjct: 313 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 372

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
            G   AG VD+A  + + M+      +  T+ I + G C    + EA+ +F ++      
Sbjct: 373 KGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFK 432

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +   +N LI  L K G    A+ + ++ S +
Sbjct: 433 LEIENLNCLIDGLCKAGKLETAWELFEKLSNE 464


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 181/343 (52%), Gaps = 3/343 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           S +  N++L ++VK    D +V+ F KE  +    PD  TFNILI  L   G  +K+   
Sbjct: 157 SVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G +P IVTYNT++   C+        ELL  +K K     DV TY  +I   C
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLC 274

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           +  ++ K   +  +M    I P+ VT+N LI+GF   G ++ A  +   MLSFG  P+ V
Sbjct: 275 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 334

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           TF++LIDG+   G   + LK+   M+ K L+P+  ++ +L++ LCK    + AR F  ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           K N +      Y  +IDG CK G +DEA V++ EM +    PD VT++ LI G C  GR 
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             A  I  ++ R+G +P+ I  ++LI    + G   EA RI +
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 207/420 (49%), Gaps = 3/420 (0%)

Query: 153 NHSFKTYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           N +   Y++++R     G+  DS+++ F  M   G  P+       + S +++G+  +  
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEI-FRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             L +    ++      +N L+N L  + + +++ Y+ ++  +    P   T+N ++   
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G  K A E    M S G   D+ TYN LI  LCR N +A+G+ LL++++ K    P+
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR-KRMIHPN 297

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VTY ++I+G+   GK+  A+ + NEM S G+ P+ VTFN LIDG    GN   A  M  
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M + G  P  V++  L+DG C+N + +        MK   +     T+T +I+ LCK  
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L++A   L ++  + + P    Y+ +I+GFCK G    A  IV  +      P+ + ++
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI   C  G + EAI I+  M+  G   D  T N L++ L K G   EA   M+  + D
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC  G  +    +   M   G+ P        +    + G+  AA  LL   
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V      YN L++ L + N   +   + ++  +    P+  T+N LI G S  G+V
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   +M SFG SP+ VT+N LI G           ++   ++ K   +P  V+Y  
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-LTPSEVSYGV 373

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK  + D A G Y  M   G+    +T+  +IDG  K G +  A  +   M   G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+S+LI+G+C+ G+     ++   +    LSPN   ++ LI   C+   L +A 
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R  + +         F +N ++   CKAG V EA   +  M      P+ V+F  LI G+
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              G  ++A S+F++M ++G  P   T  SL+  L KGG   EA + ++
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 195/471 (41%), Gaps = 74/471 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+   C+ G   +   + D+M+S G   +       +    R+ +      LL   
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  +   YN+L+N    +     A  +  E       P+  TFN LI G    G  
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE--VARGHE------------------ 317
           K+A + FY M + G +P  V+Y  L+ GLC+  E  +ARG                    
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 318 ---------------LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                          LL E+  K    PD+VTY+++I+G+CK+G+   A  I   +   G
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMS-KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 363 IKPSAV-----------------------------------TFNVLIDGFGKVGNMVSAE 387
           + P+ +                                   TFNVL+    K G +  AE
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                M S G LP+ V+F  LI+GY  +G+  +   + DEM      P  +T+  L+  L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK   L +A +FLK L          MYN ++   CK+GN+ +A  +  EM ++   PD 
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 508 VTFTILIIGHCMKGRMVEAISIFNK--MLRIGCAPDDITVNSLISCLLKGG 556
            T+T LI G C KG+ V AI +F K    R    P+ +     +  + K G
Sbjct: 649 YTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 207/425 (48%), Gaps = 4/425 (0%)

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           RV LS N     Y+ ++ + C MG       +++ M  +GH  +       V+S  +AGK
Sbjct: 466 RVGLSPNGII--YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A+  +       +  +T  ++ L+N         +A  +F E  ++   P  +T+  
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L++GL + G +++A +F   + +   + D V YNTL++ +C+   +A+   L  E+  +S
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVS 385
              PD  TYTS+ISG C+ GK   A     E  + G + P+ V +   +DG  K G   +
Sbjct: 644 -ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
             Y RE+M + G+ PD+VT +++IDGY R G++ +   L  EM  +N  PN+ T+ IL++
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              K   ++ +    + +  N ++P     + ++ G C++  ++    I+     +  + 
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D+ TF +LI   C  G +  A  +   M  +G + D  T ++++S L +     E+  ++
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882

Query: 566 QRASE 570
              S+
Sbjct: 883 HEMSK 887



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 201/477 (42%), Gaps = 70/477 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++ SLC+ G     +     M SDG LPN+   +  ++    +G+   A  +  + 
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + F Y SLL  L K  +  EA    K    + +  DT  +N L+  + + G +
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV-----------ARGHELLKEVK--- 323
            KA   F +M      PD  TY +LISGLCR  +            ARG+ L  +V    
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689

Query: 324 ----------------FKSEF-----SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                           F+ +      +PD+VT  ++I GY ++GK++K   +  EM +  
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P+  T+N+L+ G+ K  ++ ++  +   ++  G LPD +T  SL+ G C +  L  GL
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 423 KLCDEMKGKNLSPNVYTFTILINALC---------------------------------- 448
           K+      + +  + YTF +LI+  C                                  
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 449 -KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            + +R  ++R  L ++    + P+   Y  +I+G C+ G++  A V+  EM   +  P  
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           V  + ++      G+  EA  +   ML++   P   +  +L+    K G   EA  +
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 986



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 198/482 (41%), Gaps = 82/482 (17%)

Query: 178  VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            VFD M   GH P        +    + G    A+  L         + T MYN+LL A+ 
Sbjct: 565  VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624

Query: 238  KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDI 296
            K  N  +AV +F E  +    PD++T+  LI GL R G+   A  F  +  + G   P+ 
Sbjct: 625  KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684

Query: 297  VTYNTLISGLCRVNEVARGHELLKEVKFKSEF-----SPDVVTYTSVISGYCKLGKMDKA 351
            V Y   + G+ +  +   G      + F+ +      +PD+VT  ++I GY ++GK++K 
Sbjct: 685  VMYTCFVDGMFKAGQWKAG------IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 352  TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
              +  EM +    P+  T+N+L+ G+ K  ++ ++  +   ++  G LPD +T  SL+ G
Sbjct: 739  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798

Query: 412  YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC----------------------- 448
             C +  L  GLK+      + +  + YTF +LI+  C                       
Sbjct: 799  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858

Query: 449  ------------KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV-------- 488
                        + +R  ++R  L ++    + P+   Y  +I+G C+ G++        
Sbjct: 859  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918

Query: 489  ---------------------------DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
                                       DEA +++  M + +  P   +FT L+   C  G
Sbjct: 919  EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978

Query: 522  RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKK 581
             ++EA+ +   M   G   D ++ N LI+ L   G    AF + +    D  L   +  K
Sbjct: 979  NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038

Query: 582  AV 583
            A+
Sbjct: 1039 AL 1040



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 175/431 (40%), Gaps = 37/431 (8%)

Query: 159  YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            YN ++ ++C+ G       +F  M     LP+S      +S   R GK   A     +  
Sbjct: 616  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 219  P-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              G V  +  MY   ++ + K       +Y  ++   L   PD  T N +I G SR+G++
Sbjct: 676  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +K  +   +MG+    P++ TYN L+ G  +  +V+    L + +       PD +T  S
Sbjct: 736  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTCHS 794

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID----------GFGKVGNMVS-- 385
            ++ G C+   ++    I       G++    TFN+LI            F  V  M S  
Sbjct: 795  LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854

Query: 386  ------------------AEYMRERMLSF-----GYLPDVVTFSSLIDGYCRNGQLNQGL 422
                                +   RM+       G  P+   +  LI+G CR G +    
Sbjct: 855  ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914

Query: 423  KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
             + +EM    + P     + ++ AL K  + ++A   L+ +    LVP    +  ++   
Sbjct: 915  VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 974

Query: 483  CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            CK GNV EA  +   M     K D V++ +LI G C KG M  A  ++ +M   G   + 
Sbjct: 975  CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1034

Query: 543  ITVNSLISCLL 553
             T  +LI  LL
Sbjct: 1035 TTYKALIRGLL 1045



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 66/150 (44%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            + Y  ++  LC +G   +  VV + M +    P +      V +  + GK D A  LL  
Sbjct: 895  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                ++  +   + +L++   K  N  EA+ +         + D  ++N+LI GL   G+
Sbjct: 955  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  AFE + +M   G   +  TY  LI GL
Sbjct: 1015 MALAFELYEEMKGDGFLANATTYKALIRGL 1044


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 207/405 (51%), Gaps = 1/405 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           +L F+ +   +     ++ ++++  CE G  D    +   ++  G  PN  +    +  C
Sbjct: 148 WLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGC 207

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + G  + A+    +     +  + + +  L+N L K+    +   +F++       P+ 
Sbjct: 208 CKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNL 267

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T+N L+      G++ +AF+ F +M   G   ++VTYNTLI G+CR   V    +L+ +
Sbjct: 268 YTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQ 327

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +K K+  SP+++TY ++I G+C +G +DKA+ + +++ S G+ PS VT+N+LI+G+ K G
Sbjct: 328 MK-KAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAG 386

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           N      +   M   G  P  VT + LID Y R  ++ +  ++   M+   L P+VY + 
Sbjct: 387 NWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYG 446

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           +LI+ LC +  + ++ +  + +    + P   +YN +I G+CK  N   A  ++ EME K
Sbjct: 447 VLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAK 506

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
              P+  +++ +I   C  G+  EA  + +KM+ +   P    +N
Sbjct: 507 GLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILN 551



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 189/375 (50%), Gaps = 1/375 (0%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +  C   G  D +  LL   +   ++ +  +Y +L++   K  + + A   F +   +  
Sbjct: 169 IKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGL 228

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
             + +TF +LI GL + G  K  F+ F  M   G  P++ TYN L++  C   ++ R  +
Sbjct: 229 VANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFD 288

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E++ +     +VVTY ++I G C+  ++ +A  + ++M    + P+ +T+N LI GF
Sbjct: 289 LFDEMRERG-VEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGF 347

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             VGN+  A  + +++ S G  P +VT++ LI+GY + G       L  EM+G+ +SP+ 
Sbjct: 348 CDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSK 407

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T T+LI+A  +   +  A +    ++   LVP  ++Y  +I G C  GN+ E++ +   
Sbjct: 408 VTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRS 467

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M E   +P  V +  +I G+C +     A+ +  +M   G  P+  + +S+I  L K G 
Sbjct: 468 MGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGK 527

Query: 558 PNEAFRIMQRASEDQ 572
             EA  ++ +  E Q
Sbjct: 528 WEEAEVLLDKMIELQ 542



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 197/397 (49%), Gaps = 8/397 (2%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE-VTMST-FMY 229
           H S+  +  ++     LP++  +   + S   +        LL      +  +M+T  +Y
Sbjct: 37  HHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLY 96

Query: 230 NSLLNALVKQNNADEAVYMFKEYFR--LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            S++NA +K    D+A+  F E     L  +P+   FN L+  L R    +KA+ FF ++
Sbjct: 97  ESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNCFEKAWLFFNEL 154

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
                  D+ ++  +I G C    + +  +LL  ++     SP+VV YT++I G CK G 
Sbjct: 155 KE-RVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQ-DMGLSPNVVIYTTLIDGCCKNGD 212

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +++A   +++M   G+  +  TF VLI+G  K G       + E+M   G  P++ T++ 
Sbjct: 213 IERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNC 272

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L++ YC  G++ +   L DEM+ + +  NV T+  LI  +C+E R+ +A + + Q+K   
Sbjct: 273 LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAA 332

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    YN +I GFC  GN+D+A+ ++ +++     P  VT+ ILI G+   G      
Sbjct: 333 VSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVA 392

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +  +M   G +P  +T   LI   ++     +AF+I
Sbjct: 393 DLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQI 429



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 138/310 (44%), Gaps = 2/310 (0%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           K G    E  ++N  L  +  TYN +M   C  G       +FD MR  G   N      
Sbjct: 249 KDGFDLFEKMKIN-GLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNT 307

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +    R  +   A+ L+ Q +   V+ +   YN+L+       N D+A  +  +     
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             P   T+NILI+G S+ G  K   +   +M   G SP  VT   LI    R+ E+ +  
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           ++   ++ K    PDV  Y  +I G C  G M +++ ++  M    ++PS V +N +I G
Sbjct: 428 QIYSSME-KFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHG 486

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           + K  N   A  +   M + G +P+V ++SS+I   C++G+  +   L D+M    L P+
Sbjct: 487 YCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPS 546

Query: 437 VYTFTILINA 446
                ++  A
Sbjct: 547 ASILNMISKA 556



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 36/238 (15%)

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           + Y S+I+ + K   +DKA   +NEM   G+      FN L+      G++V +    + 
Sbjct: 94  LLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLL------GSLVRSNCFEKA 147

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
            L F  L + V F                              +VY+F I+I   C+   
Sbjct: 148 WLFFNELKERVKF------------------------------DVYSFGIMIKGCCENGN 177

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L+ + + L  L+   L P   +Y  +IDG CK G+++ A +   +M E     ++ TFT+
Sbjct: 178 LDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTV 237

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G   KG   +   +F KM   G  P+  T N L++     G    AF +     E
Sbjct: 238 LINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRE 295


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 193/375 (51%), Gaps = 11/375 (2%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDT 261
           RAG    +  + +  +   V+ S   +NSLL  L+K+   + A  ++ E    Y   PDT
Sbjct: 161 RAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDT 220

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +TFNILI+G    G V   F  F D+  FGC PD+VTYNTL+ GLCR  +V   + ++K 
Sbjct: 221 FTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKG 280

Query: 322 VKFKS-EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           +  KS + +P+VVTYT++I GYC   +++KA  ++ EM + G+K + +T+N LI G  + 
Sbjct: 281 MGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEA 340

Query: 381 GNMVSAEYMRERMLSFG-YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
                 + + E     G + PD  TF++L+  +C  G L+  LK+ + M    + P+  T
Sbjct: 341 RKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSAT 400

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVP-----KPFM--YNPVIDGFCKAGNVDEAN 492
           ++ L+ +LC+      A   L +L    ++      KP +  YNP+    C+ G   +A 
Sbjct: 401 YSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAE 460

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               ++  +R   D  ++  LI+GHC +G       +   MLR    PD  T  SLI+ L
Sbjct: 461 KAFRQLM-RRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGL 519

Query: 553 LKGGMPNEAFRIMQR 567
           L    P  A + +++
Sbjct: 520 LHMDKPLLALQSLEK 534



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 180/372 (48%), Gaps = 21/372 (5%)

Query: 229 YNSLLNALVKQ---NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           Y S+L  L +    N A   ++  ++  R   + +   FN L++  +R G  +++ + F 
Sbjct: 114 YFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFT 173

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M S G SP +VT+N+L++ L +        ++  E+      +PD  T+  +I G+C  
Sbjct: 174 IMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMN 233

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM--LSFGYLPDVV 403
           G +D    I+N+++  G +P  VT+N L+DG  + G +  A  + + M   S    P+VV
Sbjct: 234 GMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVV 293

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+++LI GYC   ++ + L + +EM  + L  N  T+  LI  LC+  +    +  L+  
Sbjct: 294 TYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGT 353

Query: 464 KWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
             +    P    +N ++   C AGN+D+A  +   M E + +PD  T++ L+   C  G 
Sbjct: 354 AGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGH 413

Query: 523 MVEAISIFNKMLRI-------GCAPDDITVNSLISCLLKGG---MPNEAFR-IMQRASED 571
             +A  + +K+L         GC P     N +   L + G      +AFR +M+R ++D
Sbjct: 414 YEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQD 473

Query: 572 QNLQLPSWKKAV 583
                PS+K  +
Sbjct: 474 P----PSYKTLI 481



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/446 (23%), Positives = 180/446 (40%), Gaps = 67/446 (15%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-F 217
           +N +MR+    GL      VF  M+S G  P+       ++  ++ G+ + AK +  +  
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG-- 275
               VT  TF +N L+         D+   +F +  R   +PD  T+N L+ GL R G  
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 276 -----------------------------------EVKKAFEFFYDMGSFGCSPDIVTYN 300
                                              E++KA   F +M + G   + +TYN
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           TLI GLC   +  +  ++L+       FSPD  T+ +++  +C  G +D A  ++  M+ 
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             I+P + T++ L+    + G+   AE + +++L    L                     
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL--------------------- 430

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
                  + G    P V  +  +   LC+  +   A +  +QL        P  Y  +I 
Sbjct: 431 -------LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIM 482

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK G  +    ++  M  K   PD  T+  LI G     + + A+    KMLR    P
Sbjct: 483 GHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRP 542

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  T +S+++ LL+ G  +E+  ++Q
Sbjct: 543 NSSTFHSILAKLLEQGRASESASLIQ 568



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 94/428 (21%), Positives = 174/428 (40%), Gaps = 15/428 (3%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           ++ LN +  TY  ++R  C     +    VF+ M + G   N+      +     A K +
Sbjct: 285 SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFE 344

Query: 209 AAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
             K +L +   G+ T S  T  +N+L++      N D+A+ +F+    L  QPD+ T++ 
Sbjct: 345 KIKDIL-EGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSA 403

Query: 267 LIQGLSRIGEVKKAFEFFYD-------MGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           L++ L + G  +KA +           +   GC P +  YN +   LC   +  +  +  
Sbjct: 404 LVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF 463

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +++  +   + D  +Y ++I G+CK G  +    +   M      P   T+  LI+G   
Sbjct: 464 RQLMRRG--TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLH 521

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           +   + A    E+ML   + P+  TF S++      G+ ++   L   M  KN+  N+  
Sbjct: 522 MDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSF 581

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
            T  +  L      + A + +  L       K      +I   C    V + + ++    
Sbjct: 582 STGCVRLLFGAGMNDKAFQLVHLLYGKGYSVK---MEELIRYLCHCRKVIQGSKLLLFSL 638

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E     D      +I   C   ++ EA S++ K++ +G        N L   L  GG   
Sbjct: 639 ESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLE 698

Query: 560 EAFRIMQR 567
           EA  + +R
Sbjct: 699 EAESVQKR 706


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 173/344 (50%), Gaps = 36/344 (10%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  +++L+N L  +    EA+ +      +  +PD  T N L+ GL   G+  +A    
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M  +GC P+ VTY  +++ +C+  + A   ELL++++ ++    D V Y+ +I G CK
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN-IKLDAVKYSIIIDGLCK 275

Query: 345 LGKMDKATGIYNEMNSCGI-----------------------------------KPSAVT 369
            G +D A  ++NEM   GI                                    P+ VT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           F+VLID F K G +  AE + + M+  G  PD +T++SLIDG+C+   L++  ++ D M 
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K   PN+ TF ILIN  CK NR++D     +++    +V     YN +I GFC+ G ++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            A  +  EM  ++  P+ VT+ IL+ G C  G   +A+ IF K+
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 213/428 (49%), Gaps = 14/428 (3%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVS 199
           F  FS  NLS     ++       L ++   D++ +  D + S    P   +I+F    S
Sbjct: 46  FSAFSDRNLSYRERLRS------GLVDIKADDAIDLFRDMIHSR---PLPTVIDFSRLFS 96

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           +  +  + D    L  Q     +  + +  + ++N   +      A     +  +L  +P
Sbjct: 97  AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 156

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           +T TF+ LI GL   G V +A E    M   G  PD++T NTL++GLC   + A    L+
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216

Query: 320 -KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            K V++  +  P+ VTY  V++  CK G+   A  +  +M    IK  AV ++++IDG  
Sbjct: 217 DKMVEYGCQ--PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G++ +A  +   M   G   +++T++ LI G+C  G+ + G KL  +M  + ++PNV 
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TF++LI++  KE +L +A    K++    + P    Y  +IDGFCK  ++D+AN +V  M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K C P+  TF ILI G+C   R+ + + +F KM   G   D +T N+LI    + G  
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454

Query: 559 NEAFRIMQ 566
           N A  + Q
Sbjct: 455 NVAKELFQ 462



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 200/409 (48%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N ++  LC  G      ++ D M   G  PN+      ++   ++G+   A  LL + 
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    Y+ +++ L K  + D A  +F E        +  T+NILI G    G  
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               +   DM     +P++VT++ LI    +  ++    EL KE+  +   +PD +TYTS
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTS 373

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK   +DKA  + + M S G  P+  TFN+LI+G+ K   +     +  +M   G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + D VT+++LI G+C  G+LN   +L  EM  + + PN+ T+ IL++ LC       A 
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              ++++ + +     +YN +I G C A  VD+A  +   +  K  KP   T+ I+I G 
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C KG + EA  +F KM   G APD  T N LI   L  G   ++ ++++
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 197/398 (49%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  +C+ G       +   M       ++      +    + G  D A  L ++ 
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +   YN L+         D+   + ++  +    P+  TF++LI    + G++
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E   +M   G +PD +TY +LI G C+ N + + ++++ ++       P++ T+  
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNI 408

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK  ++D    ++ +M+  G+    VT+N LI GF ++G +  A+ + + M+S  
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++VT+  L+DG C NG+  + L++ ++++   +  ++  + I+I+ +C  ++++DA 
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I G CK G + EA ++  +MEE    PD  T+ ILI  H
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
              G   +++ +  ++ R G + D  T+  +I  L  G
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 35/172 (20%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LP V+ FS L     +  Q +  L LC +M+ K ++ N+YT +I+IN  C+  +L  A  
Sbjct: 85  LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA-- 142

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
                                  F   G + +             +P+ +TF+ LI G C
Sbjct: 143 -----------------------FSAMGKIIKLGY----------EPNTITFSTLINGLC 169

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++GR+ EA+ + ++M+ +G  PD IT+N+L++ L   G   EA  ++ +  E
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 214/437 (48%), Gaps = 11/437 (2%)

Query: 140 LKFLEFSR--VNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVV-----FDYMRSDGHL--P 189
           LK LEF    VN   + +  +Y +++  LCE G ++++V ++           DG     
Sbjct: 124 LKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG 183

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N  M    +    R G  D      ++     V  + F Y SL+  L       E   + 
Sbjct: 184 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 243

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            E  R       + F +LI GL + G + +A E F +M + G  P+IVT   L+ G C  
Sbjct: 244 DEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLK 303

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             V    EL   +  +  F  DV TY   I GYCK+G++  A  +++EM   G+ P+ VT
Sbjct: 304 GNVDMARELFDAIG-EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVT 362

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N LID   K G +  A  + + M   G  PD+VT   L+DG C++ +L+Q + L +++ 
Sbjct: 363 YNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLV 422

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              L+P+V+++TILI+  C   R+ +A   L+ +   +LVP    Y+ +IDG C++G + 
Sbjct: 423 ESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRIS 482

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A  ++ EM  K   PD +T++IL+     K  + EA+ +FN+M++ G  PD +    +I
Sbjct: 483 NAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMI 542

Query: 550 SCLLKGGMPNEAFRIMQ 566
               K    +EA  + +
Sbjct: 543 DGYCKSERIDEAINLFR 559



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 202/403 (50%), Gaps = 11/403 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK-----GL 213
           Y++V+  LC  G  D     ++ M  +G  PN    EF   S IR G C   K     GL
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPN----EFTYGSLIR-GLCGVGKFLEGFGL 242

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           + +     + +S +++  L++ L K     EA  MF E      +P+  T   L+ G   
Sbjct: 243 VDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCL 302

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G V  A E F  +G +G   D+ TYN  I G C+V  V     +  E+  +    P++V
Sbjct: 303 KGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEM-CREGVVPNIV 361

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S+I   CK G++  A  I   M+  G+ P  VT  +L+DG  K   +  A  +  ++
Sbjct: 362 TYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQL 421

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  PDV +++ LI G C + ++ + + L  +M  KNL P++ T++ LI+ LC+  R+
Sbjct: 422 VESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRI 481

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A R L ++     +P    Y+ ++D   K  ++DEA  +  +M ++  +PD + +TI+
Sbjct: 482 SNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIM 541

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           I G+C   R+ EAI++F +M      PD +T   L + + K G
Sbjct: 542 IDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 584



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 172/374 (45%), Gaps = 39/374 (10%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            L+ S   + +++  LC+ G+    + +FD M + G+ PN       +      G  D A
Sbjct: 250 GLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMA 309

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + L             + YN  ++   K     +AV +F E  R    P+  T+N LI  
Sbjct: 310 RELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDC 369

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVT-------------------------------- 298
           L + GEV  A+E    M   G +PDIVT                                
Sbjct: 370 LCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPD 429

Query: 299 ---YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
              Y  LI G C    +     LL+++  K+   P +VTY+ +I G C+ G++  A  + 
Sbjct: 430 VWSYTILIHGCCTSRRMGEAMNLLRDMHLKN-LVPHIVTYSCLIDGLCRSGRISNAWRLL 488

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           NEM+  G  P  +T+++L+D   K  ++  A ++  +M+  G  PDV+ ++ +IDGYC++
Sbjct: 489 NEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKS 548

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            ++++ + L  EM  KNL P++ T+TIL NA+ K    +   +F+  ++  D+ P P + 
Sbjct: 549 ERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIR--DINPPPRVL 606

Query: 476 NPVIDGFCKAGNVD 489
              +   CK+ ++D
Sbjct: 607 -KYLAALCKSEHLD 619



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 170/347 (48%), Gaps = 10/347 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKE-YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +N  L  L+K N    A+ +F +  +  +  P   T  I+I     +G V  +F  F  +
Sbjct: 39  FNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLGHVSFSFSIFGKI 98

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G   D V  NT++ GLC    V +  E   E+   + FS + V+Y  +I+G C+ G+
Sbjct: 99  LKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEI-VNNGFSLNEVSYGILINGLCENGR 157

Query: 348 MDKATGIYNEM--------NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +++A  +   +        +   +K + V ++++ID   + G +         M+  G  
Sbjct: 158 VNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVC 217

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+  T+ SLI G C  G+  +G  L DEM  + L  +VY FT+LI+ LCK   L +AR  
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++      P       ++ G+C  GNVD A  +   + E   K D  T+ + I G+C 
Sbjct: 278 FDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCK 337

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            GR+ +A+ +F++M R G  P+ +T NSLI CL K G  + A+ I++
Sbjct: 338 VGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVK 384



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 149/318 (46%), Gaps = 7/318 (2%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           DT   N +++GL   G V KA EF  ++ + G S + V+Y  LI+GLC    V     LL
Sbjct: 106 DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 165

Query: 320 KEVKFKSEFSPD-------VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
           + ++ + E   D       VV Y+ VI   C+ G +D+    YNEM   G+ P+  T+  
Sbjct: 166 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 225

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LI G   VG  +    + + M+  G    V  F+ LIDG C+NG L +  ++ DEM  + 
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             PN+ T T L+   C +  ++ AR     +         + YN  I G+CK G V +A 
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  EM  +   P+ VT+  LI   C  G +  A  I   M R G  PD +T   L+  L
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405

Query: 553 LKGGMPNEAFRIMQRASE 570
            K    ++A  +  +  E
Sbjct: 406 CKSKRLDQAILLFNQLVE 423



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 131/272 (48%), Gaps = 8/272 (2%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + SF     +  +N  ++ L + N+ +    L  + ++ +  +P ++T T +I+ +  LG
Sbjct: 27  INSFHSHSSLAHFNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLG 86

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +  +  I+ ++   G     V  N ++ G    G ++ A    + +++ G+  + V++ 
Sbjct: 87  HVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYG 146

Query: 407 SLIDGYCRNGQLNQGLKLCDEM--------KGKNLSPNVYTFTILINALCKENRLNDARR 458
            LI+G C NG++N+ + L   +         G  +  NV  ++I+I+ LC+   +++   
Sbjct: 147 ILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFE 206

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           F  ++  N + P  F Y  +I G C  G   E   +V EM  +        FT+LI G C
Sbjct: 207 FYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLC 266

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             G +VEA  +F++M+  G  P+ +T  +L+ 
Sbjct: 267 KNGMLVEAREMFDEMVNRGYEPNIVTCTALMG 298


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 224/456 (49%), Gaps = 20/456 (4%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           N  + +K L  S+  LSL  S  TYN +++  C+ G  D+ + +   M S G   N    
Sbjct: 395 NKAIEIKDLMVSK-GLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451

Query: 195 EFFVSSCIRAGKCDAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
              +         D+A     + LL    PG   ++T     L++ L K     +A+ ++
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT-----LISGLCKHGKHSKALELW 506

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            ++       DT T N L+ GL   G++ +AF    ++   GC  D V+YNTLISG C  
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++      L E+  K    PD  TY+ +I G   + K+++A   +++    G+ P   T
Sbjct: 567 KKLDEAFMFLDEM-VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 625

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           ++V+IDG  K       +   + M+S    P+ V ++ LI  YCR+G+L+  L+L ++MK
Sbjct: 626 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 685

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K +SPN  T+T LI  +   +R+ +A+   ++++   L P  F Y  +IDG+ K G + 
Sbjct: 686 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 745

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +   ++ EM  K   P+K+T+T++I G+   G + EA  + N+M   G  PD IT    I
Sbjct: 746 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 805

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQ--LPSWKKAV 583
              LK G   EAF    + S+++N    +  W K +
Sbjct: 806 YGYLKQGGVLEAF----KGSDEENYAAIIEGWNKLI 837



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 10/390 (2%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           VF  + + G  P+       ++S +RA +    C+A   +     P       +++ + +
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSP-----DVYLFTTAI 280

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA  K    +EAV +F +       P+  TFN +I GL   G   +AF F   M   G  
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P ++TY+ L+ GL R   +   + +LKE+  K  F P+V+ Y ++I  + + G ++KA  
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           I + M S G+  ++ T+N LI G+ K G   +AE + + MLS G+  +  +F+S+I   C
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
            +   +  L+   EM  +N+SP     T LI+ LCK  + + A     Q      V    
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
             N ++ G C+AG +DEA  I  E+  + C  D+V++  LI G C K ++ EA    ++M
Sbjct: 520 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 579

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           ++ G  PD+ T + LI  L       EA +
Sbjct: 580 VKRGLKPDNYTYSILICGLFNMNKVEEAIQ 609



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 117/237 (49%), Gaps = 14/237 (5%)

Query: 338 VISGYCKLGKMDK---ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +I  YC   K D    A  ++  + + G+ PS  T N+L+       ++V A   ++   
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLT------SLVRANEFQKCCE 260

Query: 395 SF-----GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           +F     G  PDV  F++ I+ +C+ G++ + +KL  +M+   ++PNV TF  +I+ L  
Sbjct: 261 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 320

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R ++A  F +++    + P    Y+ ++ G  +A  + +A  ++ EM +K   P+ + 
Sbjct: 321 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 380

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  LI      G + +AI I + M+  G +    T N+LI    K G  + A R+++
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 437



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 14/171 (8%)

Query: 408 LIDGYCRNGQLNQ---GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           LI+ YC   + +     L +   +  K + P+  T  IL+ +L + N       F K  +
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE------FQKCCE 260

Query: 465 WNDLV-----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             D+V     P  +++   I+ FCK G V+EA  + ++MEE    P+ VTF  +I G  M
Sbjct: 261 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 320

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            GR  EA     KM+  G  P  IT + L+  L +     +A+ +++  ++
Sbjct: 321 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 371


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 201/428 (46%), Gaps = 5/428 (1%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L  L+      +++ SF++YN+V+ +L     H    +++  M  D   P +       
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
            +  R G+   A  LL             +Y ++++ALV Q    EA  +  E   +   
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            D  TFN L+ GL  +G V++A      M + GC P +VTY  L+ GLCR  +      +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +        +VV   +VI G    GK+ +AT +Y  M S G  P   T+++L+ G  
Sbjct: 305 LGRLP-----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K+G   SA  M + M   G  P++VT+S+L+  +CRNG  +    + D+M  K  S N  
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +I ALCK+ +L+ A R ++++K     P    YN +I   C    ++EA  I   +
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            E+    + +T+  LI      GR  E + + ++ML  GC  D I+ N LI  L K G  
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV 539

Query: 559 NEAFRIMQ 566
           + +  +++
Sbjct: 540 DRSMALLE 547



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 200/411 (48%), Gaps = 5/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC +G       + D M + G +P+     F +    R  + D A  +L + 
Sbjct: 249 TFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRL 308

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++  M N+++   + +     A  +++        PD  T++IL+ GL ++G  
Sbjct: 309 P----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M   GC+P+IVTY+TL+   CR         +L ++  K  FS +   Y  
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKG-FSMNSQGYNG 423

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK GK+D+AT +  EM S G KP   T+N +I        M  AE++   ++  G
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + +T+++LI    RNG+  +GL+L  EM       +V ++  LI ALCKE  ++ + 
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSM 543

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    + P  F YN +I+  CKAG V +A  +  EM  +   PD VT+  LI G 
Sbjct: 544 ALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 603

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           C  G    A+++  K+      PD +T N LIS   K  + ++A  ++ +A
Sbjct: 604 CKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKA 654



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 165/327 (50%), Gaps = 1/327 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+++M  LC++G   S   + D M   G  PN       + S  R G  D A+ +L Q 
Sbjct: 350 TYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 409

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +M++  YN ++ AL K    D+A  + +E      +PD  T+N +I  L     +
Sbjct: 410 LAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLM 469

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F ++   G   + +TYNTLI  L R      G  L  E+        DV++Y  
Sbjct: 470 EEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG-CQLDVISYNG 528

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G +D++  +  EM + GIKP+  ++N+LI+   K G +  A  + + ML+ G
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+++LI+G C+ G  +  L L +++  +N+ P++ T+ ILI+  CK   L+DA 
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             L +     +VP    +  ++  F +
Sbjct: 649 MLLDKAISGGIVPNERTWGMMVQNFVR 675



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 1/294 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ S C  G+ D  + + D M + G   NS      + +  + GK D A  L+ + 
Sbjct: 385 TYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM 444

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +          YN+++  L   +  +EA ++F+         +  T+N LI  L R G  
Sbjct: 445 KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW 504

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++      +M   GC  D+++YN LI  LC+   V R   LL+E+  K    P+  +Y  
Sbjct: 505 QEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG-IKPNNFSYNM 563

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK GK+  A  +  EM + G+ P  VT+N LI+G  KVG   +A  + E++ +  
Sbjct: 564 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 623

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
             PD+VT++ LI  +C+   L+    L D+     + PN  T+ +++    ++ 
Sbjct: 624 VHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQT 677


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 178/328 (54%), Gaps = 1/328 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N L++ L K++  +EA  +F E  +   +P   +FN LI G  + G + + F     M 
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                PD+ TY+ LI+GLC+  ++   ++L  E+  +    P+ VT+T++I+G+C  G+ 
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG-LVPNDVTFTTLINGHCVTGRA 346

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D    IY +M   G+KP  +T+N LI+G  KVG++  A+ +   M   G  PD  T++ L
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG C+ G L   L++  EM  + +  +   FT LI+  C+E ++ +A R L+++    +
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  VI GFCK G+V     ++ EM+     P  VT+ +L+ G C +G+M  A  
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANM 526

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGG 556
           + + ML +G  PDDIT N L+    K G
Sbjct: 527 LLDAMLNLGVVPDDITYNILLEGHCKHG 554



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 173/330 (52%), Gaps = 1/330 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L + L+K N    A   ++E       PD   FN+L+  L +  ++ +A   F ++G  G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P +V++NTLI+G C+   + +G  L K    ++   PDV TY+ +I+G CK G++D A
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRL-KRFMMENRVFPDVFTYSVLINGLCKEGQLDDA 314

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++ EM   G+ P+ VTF  LI+G    G       + ++ML  G  PDV+T+++LI+G
Sbjct: 315 NKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G L +  KL  EM  + L P+ +T+T+LI+  CKE  L  A    K++    +   
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +  +I GFC+ G V EA   + EM E   KPD  T+T++I G C KG +     +  
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +M   G  P  +T N L++ L K G    A
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNA 524



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 188/366 (51%), Gaps = 1/366 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F +   +   L ++ L       ++ +   G+ P+       +    +  K + A+ L  
Sbjct: 190 FHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFG 249

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  +   +N+L+N   K  N D+   + +        PD +T+++LI GL + G
Sbjct: 250 EIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEG 309

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++  A + F +M   G  P+ VT+ TLI+G C       G E+ +++  +    PDV+TY
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM-LRKGVKPDVITY 368

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I+G CK+G + +A  +  EM   G+KP   T+ +LIDG  K G++ SA  +R+ M+ 
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVK 428

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D V F++LI G+CR GQ+ +  +   EM    + P+  T+T++I+  CK+  +  
Sbjct: 429 EGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKT 488

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
             + LK+++ +  VP    YN +++G CK G +  AN+++  M      PD +T+ IL+ 
Sbjct: 489 GFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548

Query: 516 GHCMKG 521
           GHC  G
Sbjct: 549 GHCKHG 554



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 205/425 (48%), Gaps = 15/425 (3%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           LS  H F+   L + S C M        +    +S        +++F VS   R GK  A
Sbjct: 93  LSTQHHFR---LSIHSYCTMTHFLCTHKMLSEAQS--------LLQFVVS---RKGKNSA 138

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           +    S         S  +++ L+NA        +A+  F+   +   Q    +   L  
Sbjct: 139 SSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFD 198

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L ++     A+ F+ ++   G  PD+  +N L+  LC+ +++     L  E+  K    
Sbjct: 199 RLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG-KRGLR 257

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P VV++ ++I+GYCK G +D+   +   M    + P   T++VLI+G  K G +  A  +
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G +P+ VTF++LI+G+C  G+ + G+++  +M  K + P+V T+  LIN LCK
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L +A++ + ++    L P  F Y  +IDG CK G+++ A  I  EM ++  + D V 
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           FT LI G C +G+++EA     +ML  G  PDD T   +I    K G     F++++   
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497

Query: 570 EDQNL 574
            D ++
Sbjct: 498 CDGHV 502



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 1/339 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N++M  LC+    +  Q++F  +   G  P        ++   ++G  D    L     
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V    F Y+ L+N L K+   D+A  +F E       P+  TF  LI G    G   
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRAD 347

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              E +  M   G  PD++TYNTLI+GLC+V ++    +L+ E+  +    PD  TYT +
Sbjct: 348 LGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG-LKPDKFTYTML 406

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G ++ A  I  EM   GI+   V F  LI GF + G ++ AE     ML  G 
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T++ +I G+C+ G +  G KL  EM+     P V T+ +L+N LCK+ ++ +A  
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANM 526

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            L  +    +VP    YN +++G CK GN ++ + + +E
Sbjct: 527 LLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 147/298 (49%), Gaps = 7/298 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC+ G  D    +F  M   G +PN       ++     G+ D    +  Q 
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      YN+L+N L K  +  EA  +  E  +   +PD +T+ +LI G  + G++
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E   +M   G   D V +  LISG CR  +V      L+E+  ++   PD  TYT 
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM-LEAGIKPDDATYTM 475

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G+CK G +     +  EM   G  P  VT+NVL++G  K G M +A  + + ML+ G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL---CKENR 452
            +PD +T++ L++G+C++G      KL  E   K L  +  ++T LI  L   CKE +
Sbjct: 536 VVPDDITYNILLEGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLIGDLRKTCKERQ 590



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 148/298 (49%), Gaps = 1/298 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N ++   C+ G  D    +  +M  +   P+       ++   + G+ D A  L  + 
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   + +L+N       AD  + ++++  R   +PD  T+N LI GL ++G++
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +   +M   G  PD  TY  LI G C+  ++    E+ KE+  K     D V +T+
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM-VKEGIELDNVAFTA 440

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG+C+ G++ +A     EM   GIKP   T+ ++I GF K G++ +   + + M   G
Sbjct: 441 LISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           ++P VVT++ L++G C+ GQ+     L D M    + P+  T+ IL+   CK     D
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRED 558


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 1/396 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +TY +++++LC+ GL D    +FD M   G  PN       +    R GK + A G+ 
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  S   YN+L+N   K      A  +     +   +P+  TFN L++GL R+
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+  KA      M   G SPDIV+YN LI GLCR   +   ++LL  +    +  PD +T
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC-FDIEPDCLT 478

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +T++I+ +CK GK D A+     M   GI    VT   LIDG  KVG    A ++ E ++
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
               L    + + ++D   +  ++ + L +  ++    L P+V T+T L++ L +   + 
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            + R L+ +K +  +P  + Y  +I+G C+ G V+EA  +++ M++    P+ VT+T+++
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            G+   G++  A+     M+  G   +D   +SL+ 
Sbjct: 659 KGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 206/414 (49%), Gaps = 2/414 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           ++  Y+ ++ SL ++ L     V +  M +DG +         V++  + G  +AA+  +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSR 273
           S+       + + +  SLL    +  N  +A+ +F    + +   P++ +++ILI GL  
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G +++AF     MG  GC P   TY  LI  LC    + +   L  E+       P+V 
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM-IPRGCKPNVH 337

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TYT +I G C+ GK+++A G+  +M    I PS +T+N LI+G+ K G +V A  +   M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                 P+V TF+ L++G CR G+  + + L   M    LSP++ ++ +LI+ LC+E  +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           N A + L  +   D+ P    +  +I+ FCK G  D A+  +  M  K    D+VT T L
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           I G C  G+  +A+ I   ++++       ++N ++  L KG    E   ++ +
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 178/350 (50%), Gaps = 2/350 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y +++NAL K    + A     +  ++    D+     L+ G  R   ++ A + F  M 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257

Query: 289 -SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
               C+P+ V+Y+ LI GLC V  +     L  ++  K    P   TYT +I   C  G 
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRGL 316

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +DKA  +++EM   G KP+  T+ VLIDG  + G +  A  +  +M+     P V+T+++
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+GYC++G++    +L   M+ +   PNV TF  L+  LC+  +   A   LK++  N 
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P    YN +IDG C+ G+++ A  +++ M     +PD +TFT +I   C +G+   A 
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           +    MLR G + D++T  +LI  + K G   +A  I++   + + L  P
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 198/438 (45%), Gaps = 38/438 (8%)

Query: 169 MGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
           + L D+++V FD M  +    PNS      +      G+ + A GL  Q        ST 
Sbjct: 244 LNLRDALKV-FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            Y  L+ AL  +   D+A  +F E      +P+  T+ +LI GL R G++++A      M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
                 P ++TYN LI+G C+   V    ELL  V  K    P+V T+  ++ G C++GK
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
             KA  +   M   G+ P  V++NVLIDG  + G+M +A  +   M  F   PD +TF++
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL---- 463
           +I+ +C+ G+ +        M  K +S +  T T LI+ +CK  +  DA   L+ L    
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541

Query: 464 -----------------------------KWND--LVPKPFMYNPVIDGFCKAGNVDEAN 492
                                        K N   LVP    Y  ++DG  ++G++  + 
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            I+  M+   C P+   +TI+I G C  GR+ EA  + + M   G +P+ +T   ++   
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661

Query: 553 LKGGMPNEAFRIMQRASE 570
           +  G  + A   ++   E
Sbjct: 662 VNNGKLDRALETVRAMVE 679



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/482 (18%), Positives = 201/482 (41%), Gaps = 36/482 (7%)

Query: 117 LCEKLSPLNSLEVIKR-LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
           LC    P  ++ ++KR LDN                L+    +YN+++  LC  G  ++ 
Sbjct: 416 LCRVGKPYKAVHLLKRMLDN---------------GLSPDIVSYNVLIDGLCREGHMNTA 460

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
             +   M      P+       +++  + GK D A   L       +++      +L++ 
Sbjct: 461 YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           + K     +A+++ +   ++       + N+++  LS+  +VK+       +   G  P 
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +VTY TL+ GL R  ++     +L+ +K  S   P+V  YT +I+G C+ G++++A  + 
Sbjct: 581 VVTYTTLVDGLIRSGDITGSFRILELMKL-SGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC-- 413
           + M   G+ P+ VT+ V++ G+   G +  A      M+  GY  +   +SSL+ G+   
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTI----------------LINALCKENRLNDAR 457
           + G  N       ++  +   P      I                L+  LCKE R +++ 
Sbjct: 700 QKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESN 759

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++ +    +  +  M + +++ +C      +   ++  + +    P   +F ++I G 
Sbjct: 760 DLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGL 818

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
             +G    A  +  ++L      +   V + + CL++G    +   ++    +    + P
Sbjct: 819 KKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQLHCRERP 878

Query: 578 SW 579
           ++
Sbjct: 879 TF 880


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 191/361 (52%), Gaps = 9/361 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+     NSLLN     N   +AV +  +   +  +PDT TF  LI GL    +
Sbjct: 144 YEPDIVTL-----NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M   GC PD+VTY  +++GLC+  +      LL +++  ++   +VV Y+
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME-AAKIEANVVIYS 257

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +VI   CK    D A  ++ EM + G++P+ +T++ LI      G    A  +   M+  
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P++VTFS+LID + + G+L +  KL +EM  +++ PN++T++ LIN  C  +RL +A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++ L+ +   D +P    YN +I+GFCKA  VD+   +  EM ++    + VT+T LI G
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
                    A  +F +M+ +G  P+ +T N L+  L K G   +A   F  +QR++ + +
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497

Query: 574 L 574
           +
Sbjct: 498 I 498



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 209/435 (48%), Gaps = 12/435 (2%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L  I +++   L + F E   + L ++H+  TYN+++   C          +   M   G
Sbjct: 85  LSAIAKMNKFDLVISFGEKMEI-LGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNN 241
           + P+   +   ++      +   A  L+ Q     ++P  VT +T     L++ L   N 
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT-----LIHGLFLHNK 198

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
           A EAV +     +   QPD  T+  ++ GL + G+   A      M +     ++V Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           +I  LC+         L  E++ K    P+V+TY+S+IS  C  G+   A+ + ++M   
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKG-VRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            I P+ VTF+ LID F K G +V AE + E M+     P++ T+SSLI+G+C   +L + 
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            ++ + M  K+  PNV T+  LIN  CK  R++      +++    LV     Y  +I G
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           F +A + D A ++  +M      P+ +T+ IL+ G C  G++ +A+ +F  + R    PD
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497

Query: 542 DITVNSLISCLLKGG 556
             T N +I  + K G
Sbjct: 498 IYTYNIMIEGMCKAG 512



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 4/359 (1%)

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           G+++Q RP     S   ++ LL+A+ K N  D  +   ++   L    + +T+NILI   
Sbjct: 67  GVMAQSRPFP---SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCF 123

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            R   +  A      M   G  PDIVT N+L++G C  N ++    L+ ++  +  + PD
Sbjct: 124 CRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM-VEMGYKPD 182

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VT+T++I G     K  +A  + + M   G +P  VT+  +++G  K G+   A  +  
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN 242

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M +     +VV +S++ID  C+    +  L L  EM+ K + PNV T++ LI+ LC   
Sbjct: 243 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R +DA R L  +    + P    ++ +ID F K G + +A  +  EM ++   P+  T++
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 362

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            LI G CM  R+ EA  +   M+R  C P+ +T N+LI+   K    ++   + +  S+
Sbjct: 363 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 178/346 (51%), Gaps = 4/346 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +++ Y  +L   +     D+A+ +F    +    P    F+ L+  ++++ +      F 
Sbjct: 42  TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M   G S ++ TYN LI+  CR + ++    LL ++  K  + PD+VT  S+++G+C 
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM-MKLGYEPDIVTLNSLLNGFCH 160

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
             ++  A  + ++M   G KP  VTF  LI G         A  + +RM+  G  PD+VT
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           + ++++G C+ G  +  L L ++M+   +  NV  ++ +I++LCK    +DA     +++
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    Y+ +I   C  G   +A+ ++++M E++  P+ VTF+ LI     KG++V
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340

Query: 525 EAISIFNKMLRIGCAPDDITVNSLIS--CLL-KGGMPNEAFRIMQR 567
           +A  ++ +M++    P+  T +SLI+  C+L + G   +   +M R
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 139/266 (52%), Gaps = 7/266 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ V+ SLC+    D    +F  M + G  PN       +S     G+   A  LLS   
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG---LSRIG 275
             ++  +   +++L++A VK+    +A  +++E  +    P+ +T++ LI G   L R+G
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E K+  E    M    C P++VTYNTLI+G C+   V +G EL +E+  +     + VTY
Sbjct: 376 EAKQMLEL---MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG-LVGNTVTY 431

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+ +    D A  ++ +M S G+ P+ +T+N+L+DG  K G +  A  + E +  
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQG 421
               PD+ T++ +I+G C+ G+   G
Sbjct: 492 STMEPDIYTYNIMIEGMCKAGKWKMG 517



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 75/165 (45%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S++ +  TY+ ++   C +      + + + M     LPN       ++   +A + D  
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +     +  +T  Y +L++   +  + D A  +FK+   +   P+  T+NIL+ G
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
           L + G++ KA   F  +      PDI TYN +I G+C+  +   G
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 59/127 (46%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+    D    +F  M   G + N+      +    +A  CD A+ +  Q 
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN LL+ L K     +A+ +F+   R   +PD +T+NI+I+G+ + G+ 
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514

Query: 278 KKAFEFF 284
           K    +F
Sbjct: 515 KMGGIYF 521


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 184/376 (48%), Gaps = 1/376 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++R LC+ G     + + D +   G LPN      F+    + G+ D A  ++   
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN+L+  L K +   EA     +      +PD++T+N LI G  + G V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A     D    G  PD  TY +LI GLC   E  R   L  E   K    P+V+ Y +
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG-IKPNVILYNT 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G    G + +A  + NEM+  G+ P   TFN+L++G  K+G +  A+ + + M+S G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y PD+ TF+ LI GY    ++   L++ D M    + P+VYT+  L+N LCK ++  D  
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +      P  F +N +++  C+   +DEA  ++ EM+ K   PD VTF  LI G 
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576

Query: 518 CMKGRMVEAISIFNKM 533
           C  G +  A ++F KM
Sbjct: 577 CKNGDLDGAYTLFRKM 592



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 195/397 (49%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN +M  L + G  D    V+  MR  G  P+       + S  +  +  AA  LL+  
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 M+   Y +++    ++N   E   +F +           TFN L++ L + G+V
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+  +    +   G  P++ TYN  I GLC+  E+  G   +     +    PDV+TY +
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL-DGAVRMVGCLIEQGPKPDVITYNN 291

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  K  +A     +M + G++P + T+N LI G+ K G +  AE +    +  G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PD  T+ SLIDG C  G+ N+ L L +E  GK + PNV  +  LI  L  +  + +A 
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    L+P+   +N +++G CK G V +A+ +V  M  K   PD  TF ILI G+
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             + +M  A+ I + ML  G  PD  T NSL++ L K
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 196/419 (46%), Gaps = 16/419 (3%)

Query: 167 CEMGLHDSVQVVFDY----MRSDGHLPNSPMIEFFVSSCI-----------RAGKCDAAK 211
           CEM +     VV  +     +++G+     M+   VS C+           + G     +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            LL +     V  + F YN  +  L ++   D AV M         +PD  T+N LI GL
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +  + ++A  +   M + G  PD  TYNTLI+G C+   V     ++ +  F   F PD
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG-FVPD 355

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
             TY S+I G C  G+ ++A  ++NE    GIKP+ + +N LI G    G ++ A  +  
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M   G +P+V TF+ L++G C+ G ++    L   M  K   P+++TF ILI+    + 
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++ +A   L  +  N + P  + YN +++G CK    ++       M EK C P+  TF 
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           IL+   C   ++ EA+ +  +M      PD +T  +LI    K G  + A+ + ++  E
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 188/397 (47%), Gaps = 2/397 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  L     TYN ++   C+ G+    + +      +G +P+       +      G+ 
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  L ++     +  +  +YN+L+  L  Q    EA  +  E       P+  TFNIL
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL ++G V  A      M S G  PDI T+N LI G     ++    E+L +V   + 
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL-DVMLDNG 491

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TY S+++G CK  K +     Y  M   G  P+  TFN+L++   +   +  A 
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINA 446
            + E M +    PD VTF +LIDG+C+NG L+    L  +M +   +S +  T+ I+I+A
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
             ++  +  A +  +++    L P  + Y  ++DGFCK GNV+     + EM E    P 
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             T   +I   C++ R+ EA  I ++M++ G  P+ +
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 206/447 (46%), Gaps = 12/447 (2%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           L P +   VIK   +P   L+     R  +   H+  TY  V+  L   G  ++++ V  
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64

Query: 181 YMRSDGHLPNSPMIEFFVSSCI---RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            MR +  + N  +   +V +     R GK   A  +  +    +   + F YN++++ LV
Sbjct: 65  DMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLV 122

Query: 238 KQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
                D+A    K Y R+  +   PD ++F I ++   +      A     +M S GC  
Sbjct: 123 DSGYFDQA---HKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           ++V Y T++ G    N  A G+EL  ++   S  S  + T+  ++   CK G + +   +
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKM-LASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            +++   G+ P+  T+N+ I G  + G +  A  M   ++  G  PDV+T+++LI G C+
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           N +  +      +M  + L P+ YT+  LI   CK   +  A R +    +N  VP  F 
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y  +IDG C  G  + A  +  E   K  KP+ + +  LI G   +G ++EA  + N+M 
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEA 561
             G  P+  T N L++ L K G  ++A
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDA 445



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 1/301 (0%)

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++   R G+V++A   F  M  + C P + +YN ++S L       + H++   ++ +  
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG- 141

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +PDV ++T  +  +CK  +   A  + N M+S G + + V +  ++ GF +        
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +ML+ G    + TF+ L+   C+ G + +  KL D++  + + PN++T+ + I  L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+   L+ A R +  L      P    YN +I G CK     EA V + +M  +  +PD 
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+  LI G+C  G +  A  I    +  G  PD  T  SLI  L   G  N A  +   
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381

Query: 568 A 568
           A
Sbjct: 382 A 382



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 13/330 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +T+N+++  LC+MG       +   M S G+ P+       +       K + A  +L  
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V    + YNSLLN L K +  ++ +  +K        P+ +TFNIL++ L R  +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A     +M +   +PD VT+ TLI G C+  ++   + L ++++   + S    TY 
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I  + +   +  A  ++ EM    + P   T+ +++DGF K GN+         M+  
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G++P + T   +I+  C   ++ +   +   M  K L P        +N +C  ++   A
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVA 720

Query: 457 RRFLKQLKWNDLVPKP----FMYNPVIDGF 482
                +L   DL+ K     + Y  + DG 
Sbjct: 721 A---PKLVLEDLLKKSCITYYAYELLFDGL 747


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 175/330 (53%), Gaps = 1/330 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F +N L++   K      A  +F E  +   +P   +FN LI G  + G V++ F     
Sbjct: 143 FFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGV 202

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M S    PD+ T++ LI+GLC+   +  G  L  E+  K    P+ VT+T +I G CK G
Sbjct: 203 MESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG-LVPNGVTFTVLIDGQCKGG 261

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+D A   +  M + G++P  VT+N LI+G  KVG++  A  +   M + G  PD +TF+
Sbjct: 262 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFT 321

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +LIDG C+ G +   L++   M  + +  +   FT+LI+ LC++ R++DA R L+ +   
Sbjct: 322 TLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSA 381

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    Y  V+D FCK GNV     ++ EM+     P  VT+  L+ G C +G++  A
Sbjct: 382 GFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNA 441

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             + + ML +G AP+DIT N L+    K G
Sbjct: 442 KMLLDAMLNVGVAPNDITYNILLEGHSKHG 471



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 182/360 (50%), Gaps = 4/360 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +F  +N++M   C++G   S ++VFD +   G  P        +S C +AG  +    L 
Sbjct: 141 NFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLK 200

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  V    F +++L+N L K+   DE   +F E       P+  TF +LI G  + 
Sbjct: 201 GVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKG 260

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+V  A + F  M + G  PD+VTYN LI+GLC+V ++     L+ E+   S   PD +T
Sbjct: 261 GKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMS-ASGLRPDRIT 319

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +T++I G CK G M+ A  I   M   GI+   V F VLI G  + G +  AE M   ML
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G+ PD  T++ ++D +C+ G +  G KL  EM+     P V T+  L+N LCK+ ++ 
Sbjct: 380 SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVK 439

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A+  L  +    + P    YN +++G  K G+  + ++  +   EK    D  ++T L+
Sbjct: 440 NAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNS---EKGLVKDYASYTALV 496



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 157/299 (52%), Gaps = 1/299 (0%)

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E+++++ F+ ++   G  P+   +N L+ G C+V  V     +  E+  K    P VV++
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIP-KRGLRPTVVSF 180

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++ISG CK G +++   +   M S  + P   TF+ LI+G  K G +     + + M  
Sbjct: 181 NTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 240

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G +P+ VTF+ LIDG C+ G+++  LK    M  + + P++ T+  LIN LCK   L +
Sbjct: 241 KGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 300

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           ARR + ++  + L P    +  +IDG CK G+++ A  I   M E+  + D V FT+LI 
Sbjct: 301 ARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLIS 360

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           G C  GR+ +A  +   ML  G  PDD T   ++ C  K G     F++++    D ++
Sbjct: 361 GLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHV 419


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 224/456 (49%), Gaps = 20/456 (4%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           N  + +K L  S+  LSL  S  TYN +++  C+ G  D+ + +   M S G   N    
Sbjct: 371 NKAIEIKDLMVSK-GLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 427

Query: 195 EFFVSSCIRAGKCDAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
              +         D+A     + LL    PG   ++T     L++ L K     +A+ ++
Sbjct: 428 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT-----LISGLCKHGKHSKALELW 482

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            ++       DT T N L+ GL   G++ +AF    ++   GC  D V+YNTLISG C  
Sbjct: 483 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 542

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++      L E+  K    PD  TY+ +I G   + K+++A   +++    G+ P   T
Sbjct: 543 KKLDEAFMFLDEM-VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 601

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           ++V+IDG  K       +   + M+S    P+ V ++ LI  YCR+G+L+  L+L ++MK
Sbjct: 602 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 661

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K +SPN  T+T LI  +   +R+ +A+   ++++   L P  F Y  +IDG+ K G + 
Sbjct: 662 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 721

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +   ++ EM  K   P+K+T+T++I G+   G + EA  + N+M   G  PD IT    I
Sbjct: 722 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 781

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQ--LPSWKKAV 583
              LK G   EAF    + S+++N    +  W K +
Sbjct: 782 YGYLKQGGVLEAF----KGSDEENYAAIIEGWNKLI 813



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 10/390 (2%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           VF  + + G  P+       ++S +RA +    C+A   +     P       +++ + +
Sbjct: 202 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSP-----DVYLFTTAI 256

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA  K    +EAV +F +       P+  TFN +I GL   G   +AF F   M   G  
Sbjct: 257 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 316

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P ++TY+ L+ GL R   +   + +LKE+  K  F P+V+ Y ++I  + + G ++KA  
Sbjct: 317 PTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSLNKAIE 375

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           I + M S G+  ++ T+N LI G+ K G   +AE + + MLS G+  +  +F+S+I   C
Sbjct: 376 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 435

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
            +   +  L+   EM  +N+SP     T LI+ LCK  + + A     Q      V    
Sbjct: 436 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 495

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
             N ++ G C+AG +DEA  I  E+  + C  D+V++  LI G C K ++ EA    ++M
Sbjct: 496 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 555

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           ++ G  PD+ T + LI  L       EA +
Sbjct: 556 VKRGLKPDNYTYSILICGLFNMNKVEEAIQ 585



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 117/237 (49%), Gaps = 14/237 (5%)

Query: 338 VISGYCKLGKMDK---ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +I  YC   K D    A  ++  + + G+ PS  T N+L+       ++V A   ++   
Sbjct: 183 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLT------SLVRANEFQKCCE 236

Query: 395 SF-----GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           +F     G  PDV  F++ I+ +C+ G++ + +KL  +M+   ++PNV TF  +I+ L  
Sbjct: 237 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 296

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R ++A  F +++    + P    Y+ ++ G  +A  + +A  ++ EM +K   P+ + 
Sbjct: 297 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 356

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  LI      G + +AI I + M+  G +    T N+LI    K G  + A R+++
Sbjct: 357 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 413



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 14/171 (8%)

Query: 408 LIDGYCRNGQLNQ---GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           LI+ YC   + +     L +   +  K + P+  T  IL+ +L + N       F K  +
Sbjct: 183 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE------FQKCCE 236

Query: 465 WNDLV-----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             D+V     P  +++   I+ FCK G V+EA  + ++MEE    P+ VTF  +I G  M
Sbjct: 237 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 296

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            GR  EA     KM+  G  P  IT + L+  L +     +A+ +++  ++
Sbjct: 297 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 347


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 230/510 (45%), Gaps = 51/510 (10%)

Query: 103 LLRSSYLSDTCA----------------RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFS 146
           + R S + DTC                 RYL   L+PL    V+   ++ +  L+F  ++
Sbjct: 177 VFRHSLVRDTCKLIQLSSSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWA 236

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
                  H    Y +++  L +  L    + +   M             F + S  RAG+
Sbjct: 237 DRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGR 296

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A  +L+  +   V  +  + N+ ++ LV  N   +A+   +    +   P+  T+N 
Sbjct: 297 LRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNC 356

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI+G   + +V +A E    M S GCSPD V+Y T++  LCR   +    EL+K+++  S
Sbjct: 357 LIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDS 416

Query: 327 EFSPDVVTYTSVIS-----------------------------------GYCKLGKMDKA 351
           +  PD VTY S+I                                     YCK GK+ KA
Sbjct: 417 KLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKA 476

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             + +EM S G  P  VT+  ++DGF ++G +  A+ M ++M      P+ VT+++ ++G
Sbjct: 477 KELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNG 536

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            CRNG+  +  K+ +  + +  +PN  T++++++ L +E +LN+A   ++++      P 
Sbjct: 537 LCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPN 596

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
           P   N ++   C+ G   EAN ++ E   K C  + V FT +I G C K  +  A+S+ +
Sbjct: 597 PVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 656

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            M      PD +T  +LI  L K     EA
Sbjct: 657 DMYLCNKHPDTVTYTALIDALAKTDRIEEA 686



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 222/472 (47%), Gaps = 50/472 (10%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           K  L+F E   V + +  +  TYN +++  C +   D    + D M S G  P+      
Sbjct: 333 KKALRFAE-RMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYT 391

Query: 197 FVSSCIRAGKCDAAKGLL------SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
            +    R  + +  + L+      S+  P  VT     YNSL+  L K  + DEA+ + +
Sbjct: 392 VMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVT-----YNSLIQMLSKHGHGDEALEILQ 446

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E  +L  + D   ++ ++    + G+++KA E   +M S GC PD+VTY +++ G CR+ 
Sbjct: 447 EAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIG 506

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           ++ +  ++++++ +K    P+ VTYT+ ++G C+ GK  +A  + N        P+A+T+
Sbjct: 507 KLDQAKKMMQQM-YKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITY 565

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLP------------------------------ 400
           +V++ G  + G +  A  +   M+  G+ P                              
Sbjct: 566 SVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMN 625

Query: 401 -----DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                +VV F+++I G+C+   L   L L D+M   N  P+  T+T LI+AL K +R+ +
Sbjct: 626 KGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEE 685

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     ++    LVP P  Y  VI  +C+ G V++   ++ +M  K     +  + ++I 
Sbjct: 686 ATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLK--SRFQTAYNLVIE 743

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             C  G + EA S+  ++LR     D  T + L+   L  G+P  A+++  R
Sbjct: 744 KLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACR 795



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 36/270 (13%)

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+  Y + G++  A  +   M   G++P+    N  I        +  A    ERM+  G
Sbjct: 287 VMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIG 346

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT++ LI GYC   Q++Q ++L D+M  K  SP+  ++  ++  LC++ RLN+ R
Sbjct: 347 IAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIR 406

Query: 458 RFLKQLKWND-LVPKPFMYN-----------------------------------PVIDG 481
             +K+++ +  L+P    YN                                    ++  
Sbjct: 407 ELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHA 466

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +CK G + +A  +V+EM  K C PD VT+T ++ G C  G++ +A  +  +M +  C P+
Sbjct: 467 YCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPN 526

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASED 571
            +T  + ++ L + G   EA ++M  + E+
Sbjct: 527 AVTYTTFLNGLCRNGKSLEARKMMNMSEEE 556



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 5/268 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY++V+  L   G L+++  VV + M   G  PN   I   V S  R GK   A  LL +
Sbjct: 564 TYSVVVHGLRREGKLNEACDVVRE-MIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKE 622

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                  ++   + ++++   ++++ + A+ +  + +     PDT T+  LI  L++   
Sbjct: 623 CMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDR 682

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A E    M   G  P  VTY ++I   CR   V    +LLK++  KS F      Y 
Sbjct: 683 IEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQ---TAYN 739

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            VI   CK G +++A  +  E+     +  A T +VL++ +  VG  +SA  +  RM + 
Sbjct: 740 LVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNR 799

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
             +PD+     +       G+L +  +L
Sbjct: 800 NLIPDLKLCEKVSKRLVVEGKLEEADRL 827



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 3/146 (2%)

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
            L P  + F ++  +  +  RL DA + L  ++   + P   + N  I        + +A
Sbjct: 278 QLCPEAFGFVMV--SYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKA 335

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
                 M      P+ VT+  LI G+C   ++ +A+ + ++M   GC+PD ++  +++  
Sbjct: 336 LRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGL 395

Query: 552 LLKGGMPNEAFRIMQRASEDQNLQLP 577
           L +    NE   ++++   D  L LP
Sbjct: 396 LCRDKRLNEIRELIKKMQTDSKL-LP 420


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 220/456 (48%), Gaps = 21/456 (4%)

Query: 126 SLEVIKRLDNPKLGLKFLE---FSRVN--------LSLNH------SFKTYNLVMRSLCE 168
           ++ VI +L +PK   + L+    SR N        L L H      S   ++L++R  C+
Sbjct: 108 AIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQ 167

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           + + D     F  M+  G  P +      ++   R  + + A    +     E+  + + 
Sbjct: 168 LRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYT 227

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N ++N L K+    +A            +P   T+N L+QG S  G ++ A     +M 
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           S G  PD+ TYN ++S +C  NE  R  E+L+E+K +    PD V+Y  +I G    G +
Sbjct: 288 SKGFQPDMQTYNPILSWMC--NE-GRASEVLREMK-EIGLVPDSVSYNILIRGCSNNGDL 343

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A    +EM   G+ P+  T+N LI G      + +AE +   +   G + D VT++ L
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+GYC++G   +   L DEM    + P  +T+T LI  LC++N+  +A    +++    +
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P   M N ++DG C  GN+D A  ++ EM+     PD VT+  L+ G C +G+  EA  
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +  +M R G  PD I+ N+LIS   K G    AF +
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 192/395 (48%), Gaps = 4/395 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC+ G     +     M   G  P        V      G+ + A+ ++S+ 
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +          YN +L+ +  +  A E +   KE   +   PD+ ++NILI+G S  G++
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLV---PDSVSYNILIRGCSNNGDL 343

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF +  +M   G  P   TYNTLI GL   N++     L++E++ K     D VTY  
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG-IVLDSVTYNI 402

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC+ G   KA  +++EM + GI+P+  T+  LI    +      A+ + E+++  G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V  ++L+DG+C  G +++   L  EM   +++P+  T+  L+  LC E +  +AR
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++K   + P    YN +I G+ K G+   A ++  EM      P  +T+  L+ G 
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                   A  +  +M   G  P+D +  S+I  +
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 4/308 (1%)

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
           T  F++L++   ++  V +A E FY M   G  P   T N +++ L R+N +        
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           ++ ++ E   +V T+  +I+  CK GK+ KA G    M   GIKP+ VT+N L+ GF   
Sbjct: 215 DM-YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  +   M S G+ PD+ T++ ++   C  G+ ++ L+   EMK   L P+  ++
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSY 330

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            ILI        L  A  +  ++    +VP  + YN +I G      ++ A +++ E+ E
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K    D VT+ ILI G+C  G   +A ++ ++M+  G  P   T  SLI  L +     E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450

Query: 561 AFRIMQRA 568
           A  + ++ 
Sbjct: 451 ADELFEKV 458



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 1/223 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G       + D M +DG  P        +    R  K   A  L  + 
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     M N+L++      N D A  + KE   +   PD  T+N L++GL   G+ 
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E   +M   G  PD ++YNTLISG  +  +      ++++      F+P ++TY +
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF-MVRDEMLSLGFNPTLLTYNA 577

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           ++ G  K  + + A  +  EM S GI P+  +F  +I+    +
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 64/151 (42%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N +M   C +G  D    +   M      P+       +      GK + A+ L+ + + 
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +      YN+L++   K+ +   A  +  E   L   P   T+N L++GLS+  E + 
Sbjct: 531 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           A E   +M S G  P+  ++ ++I  +  ++
Sbjct: 591 AEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 186/363 (51%), Gaps = 4/363 (1%)

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
           CD     L + + G V++ ++ +  L++A  K   A++AV  F        +PD +T+N+
Sbjct: 108 CDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNV 167

Query: 267 LIQGLSRIGEV--KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +++ + R  EV    AF  + +M    CSP++ T+  L+ GL +    +   ++  ++  
Sbjct: 168 ILRVMMR-EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTG 226

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +   SP+ VTYT +ISG C+ G  D A  ++ EM + G  P +V  N L+DGF K+G MV
Sbjct: 227 RG-ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMV 285

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  +       G++  +  +SSLIDG  R  +  Q  +L   M  KN+ P++  +TILI
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILI 345

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
             L K  ++ DA + L  +    + P  + YN VI   C  G ++E   +  EM E    
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD  T TILI   C  G + EA  IF ++ + GC+P   T N+LI  L K G   EA  +
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465

Query: 565 MQR 567
           + +
Sbjct: 466 LHK 468



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 217/515 (42%), Gaps = 85/515 (16%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           VIK   N +LG +F  ++     L    +++ LV+  L E    D      + ++S G  
Sbjct: 66  VIKDEVNRQLGFRFFIWASRRERLRSR-ESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 124

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
            +S      +S+  + G  + A     + +  +     F YN +L  ++++    E  +M
Sbjct: 125 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE----EVFFM 180

Query: 249 -----FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
                + E  +    P+ +TF IL+ GL + G    A + F DM   G SP+ VTY  LI
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM--------------- 348
           SGLC+        +L  E++    + PD V + +++ G+CKLG+M               
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNY-PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGF 299

Query: 349 --------------------DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
                                +A  +Y  M    IKP  + + +LI G  K G +  A  
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALK 359

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M S G  PD   ++++I   C  G L +G  L  EM      P+  T TILI ++C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR------ 502
           +   + +A     +++ +   P    +N +IDG CK+G + EA +++ +ME  R      
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479

Query: 503 ---------------------------------CKPDKVTFTILIIGHCMKGRMVEAISI 529
                                              PD V++ +LI G C  G +  A+ +
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            N +   G +PD +T N+LI+ L + G   EAF++
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 193/424 (45%), Gaps = 9/424 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++  LC+ G  D  + +F  M++ G+ P+S      +    + G+   A  LL  F
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +    Y+SL++ L +     +A  ++    +   +PD   + ILIQGLS+ G++
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A +    M S G SPD   YN +I  LC    +  G  L  E+  ++E  PD  T+T 
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS-ETESFPDACTHTI 413

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C+ G + +A  I+ E+   G  PS  TFN LIDG  K G +  A  +  +M   G
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG 472

Query: 398 -----YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
                +L    + +   D    +G + +  +          SP++ ++ +LIN  C+   
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++ A + L  L+   L P    YN +I+G  + G  +EA  +    ++ R  P    +  
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRS 590

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           L+   C K +++ A +++ K L+     DD T N +  C  +G       R+++  +   
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKD 650

Query: 573 NLQL 576
            L L
Sbjct: 651 ELTL 654



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 35/315 (11%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D++ F +LI   +++G  +KA E F  M  F C PD+ TYN ++  + R           
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR----------- 174

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +EV F   F+                        +YNEM  C   P+  TF +L+DG  K
Sbjct: 175 EEVFFMLAFA------------------------VYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G    A+ M + M   G  P+ VT++ LI G C+ G  +   KL  EM+     P+   
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
              L++  CK  R+ +A   L+  + +  V     Y+ +IDG  +A    +A  + A M 
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           +K  KPD + +TILI G    G++ +A+ + + M   G +PD    N++I  L   G+  
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390

Query: 560 EAFRIMQRASEDQNL 574
           E   +    SE ++ 
Sbjct: 391 EGRSLQLEMSETESF 405



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 165/382 (43%), Gaps = 45/382 (11%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+  +    +    +AGK + A  LLS      ++  T+ YN+++ AL  +   +E   +
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
             E     S PD  T  ILI  + R G V++A E F ++   GCSP + T+N LI GLC+
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455

Query: 309 VNEVARGHELLKEVKF--------------------------------------KSEFSP 330
             E+     LL +++                                        +  SP
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSP 515

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+V+Y  +I+G+C+ G +D A  + N +   G+ P +VT+N LI+G  +VG    A  + 
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
                F + P V  + SL+   CR  ++     L  +   K    +  T    I    KE
Sbjct: 576 YAKDDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETAN-EIEQCFKE 632

Query: 451 NRLNDARRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
                A R L +L  + ++L   P  Y   + G C++G   EA ++ + + EK+      
Sbjct: 633 GETERALRRLIELDTRKDELTLGP--YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPP 690

Query: 509 TFTILIIGHCMKGRMVEAISIF 530
           +   LI G C + ++  AI +F
Sbjct: 691 SCVKLIHGLCKREQLDAAIEVF 712



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 46/246 (18%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           F R++ S N SF T       + E G          +    G  P+       ++   RA
Sbjct: 478 FLRLSHSGNRSFDT-------MVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF--KEYFR----LYSQ 258
           G  D A  LL+  +   ++  +  YN+L+N L +    +EA  +F  K+ FR    +Y  
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRS 590

Query: 259 PDTWT---------FNILIQGLSRI-----------------GEVKKAFEFFYDMGSFGC 292
             TW+         FN+ ++ L +I                 GE ++A     ++ +   
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKD 650

Query: 293 SPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
              +  Y   + GLC   R +E      +L+E K      P  V    +I G CK  ++D
Sbjct: 651 ELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVT-PPSCV---KLIHGLCKREQLD 706

Query: 350 KATGIY 355
            A  ++
Sbjct: 707 AAIEVF 712


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 227/468 (48%), Gaps = 10/468 (2%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLK-FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
           ++L P   + +I +  N  L L+ FL   + +    H++ TY+ ++  L      D V+ 
Sbjct: 45  QRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVES 104

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           +   +R+    P     E      +R    AG+ +++  +  +     V  S    N+LL
Sbjct: 105 LMADLRNS--YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 162

Query: 234 NALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           N L++    D    MFK     +   P+ +T N+L++ L +  +++ A++   ++ S G 
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P++VTY T++ G     ++     +L+E+     + PD  TYT ++ GYCKLG+  +A 
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEM-LDRGWYPDATTYTVLMDGYCKLGRFSEAA 281

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            + ++M    I+P+ VT+ V+I    K      A  M + ML   ++PD      +ID  
Sbjct: 282 TVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 341

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C + ++++   L  +M   N  P+    + LI+ LCKE R+ +AR+   + +    +P  
Sbjct: 342 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGS-IPSL 400

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +I G C+ G + EA  +  +M E++CKP+  T+ +LI G    G + E + +  +
Sbjct: 401 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 460

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWK 580
           ML IGC P+  T   L   L K G   +A +I+  A  +  +   SW+
Sbjct: 461 MLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWE 508


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 209/444 (47%), Gaps = 36/444 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  +   ++ D M   G  PN   +   V    +A K + A  +    
Sbjct: 393 TYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETA 452

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEA-----------------VY------------- 247
                  ++  Y SL++ L K+ N D+A                 VY             
Sbjct: 453 SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRK 512

Query: 248 -----MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                +FKE  R   QPD    N  +  + + G+V+K    F D+  +G  PD+ +Y+ L
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 572

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I GL +  +      +   +K +  F+ D   Y +V+ G+CK GK+DKA  +  EM    
Sbjct: 573 IHGLTKAGQARETSSIFHAMK-QQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P+  T+  +IDG  K+  +  A  + E   S G   +V+ +SSLIDG+ + G++++  
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAY 691

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM  K L+PNVYT+  L++AL K   +N+A    + +K     P  + Y+ +I+G 
Sbjct: 692 LILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 751

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+    ++A V   EM+++   P+ VT+T +I G    G + +A S+F +    G  PD 
Sbjct: 752 CRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDA 811

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
            + N+LI  +       EA+ + +
Sbjct: 812 ASFNALIEGMSHANRAIEAYHVFE 835



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 197/395 (49%), Gaps = 4/395 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L + G  D    +F+ M   GH  N  +    + +    G+ +    +  + 
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     + N+ ++ + K  + ++   +F++       PD  +++ILI GL++ G+ 
Sbjct: 523 NRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQA 582

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++    F+ M   G + D   YN ++ G C+  ++ + +E+L+E+K K    P V TY S
Sbjct: 583 RETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVK-RVPPTVATYGS 641

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K+ ++D+A  ++ E  S GI+ + + ++ LIDGFGKVG +  A  + E M+  G
Sbjct: 642 IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 701

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++SL+D   +  ++N+ L     MK    SPN YT++ILIN LC+  + N A 
Sbjct: 702 LTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 761

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++   LVP    Y  +I G  K GN+ +A  +    +     PD  +F  LI G 
Sbjct: 762 VFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGM 821

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               R +EA  +F +    GC    I V + IS L
Sbjct: 822 SHANRAIEAYHVFEETRLKGC---RINVKACISLL 853



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 207/448 (46%), Gaps = 37/448 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G     + +F  M ++  +P +      +     AG+ + A  LL Q 
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQL 348

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      S   +NS+L  L K+   DEA+ +F E  +  ++P++ T+NI+I  L   G+V
Sbjct: 349 KERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNSSTYNIIIDMLCMAGKV 407

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A+    +M   G  P+++T N ++  LC+  +    +E+  E   +   +P+ VTY S
Sbjct: 408 EEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF-ETASQRGCNPNSVTYCS 466

Query: 338 VISGYCKLGKMDKA---------TG--------------------------IYNEMNSCG 362
           +I G  K G +D A         TG                          I+ EMN  G
Sbjct: 467 LIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRG 526

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +P     N  +D   K G++     + E +  +G+LPDV ++S LI G  + GQ  +  
Sbjct: 527 CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETS 586

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            +   MK +  + +   +  +++  CK  +L+ A   L+++K   + P    Y  +IDG 
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K   +DEA ++  E + K  + + + ++ LI G    GR+ EA  I  +M++ G  P+ 
Sbjct: 647 AKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 706

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
            T NSL+  L+K    NEA    Q   E
Sbjct: 707 YTWNSLMDALVKAEEINEALICFQSMKE 734



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 200/466 (42%), Gaps = 41/466 (8%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHD--SVQVVFDYMRS 184
           + V++ L NP L   F   S            YN V+  L     HD  +++ V + M  
Sbjct: 85  IPVLRTLRNPSLAAPFFLASSAASPHPLPADAYNAVLPFLS----HDLAAMEKVLEEMSV 140

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
            G+   +P     VS+ +R  + D A+ +++  R  +   +   Y  L+ A+ +    + 
Sbjct: 141 LGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPER 200

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A+ + ++   +  +     F  L++ L+R G V+ A     ++      PDIV YN  I 
Sbjct: 201 ALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCID 260

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
              +   V    +   E+K +    PD V+YTS+I   CK G++ +A  ++ +M +    
Sbjct: 261 CFGKAGNVDMAWKFFHELKSQG-LKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAV 319

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS----------------- 407
           P A  +N +I G+G  G   +A  + +++   G +P VV+F+S                 
Sbjct: 320 PCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTL 379

Query: 408 -----------------LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
                            +ID  C  G++ +   + DEM+   L PN+ T  I+++ LCK 
Sbjct: 380 FEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKA 439

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            +   A    +        P    Y  +IDG  K GNVD+A  +   M +     + V +
Sbjct: 440 KKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVY 499

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           T LI    M GR  +   IF +M R GC PD   +N+ + C+ K G
Sbjct: 500 TSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAG 545



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 203/478 (42%), Gaps = 41/478 (8%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +++L   +RLD+ +  +  +      L    +F  Y +++ ++ E    +    +   M+
Sbjct: 154 VSALVRTRRLDDAERVIAAMR----RLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQ 209

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
             G+    P+    V +  R G+ + A  L+ + +   +     +YN  ++   K  N D
Sbjct: 210 EVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 269

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A   F E      +PD  ++  +I  L + G + +A E F  M +    P    YNT+I
Sbjct: 270 MAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMI 329

Query: 304 SGLCRVNEVARGHELLKEVK---------------------------------FKSEFSP 330
            G     +    ++LL ++K                                  K +  P
Sbjct: 330 MGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEP 389

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +  TY  +I   C  GK+++A  I +EM   G+ P+ +T N+++D   K      A  M 
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMF 449

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALC 448
           E     G  P+ VT+ SLIDG  + G ++   +L + M   G N +P VYT   LI    
Sbjct: 450 ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTS--LIRNFF 507

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              R  D  +  K++      P   + N  +D   KAG+V++   I  +++     PD  
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 567

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +++ILI G    G+  E  SIF+ M + G A D    N+++    K G  ++A+ +++
Sbjct: 568 SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++Y++++  L + G       +F  M+  G   ++      V    ++GK D A  +L +
Sbjct: 567 RSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   V  +   Y S+++ L K +  DEA  +F+E      + +   ++ LI G  ++G 
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A+    +M   G +P++ T+N+L+  L +  E+       + +K + + SP+  TY+
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMK-EMKCSPNTYTYS 745

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G C++ K +KA   + EM   G+ P+ VT+  +I G  KVGN+  A  + ER  + 
Sbjct: 746 ILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKAN 805

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  +F++LI+G     +  +   + +E + K    NV     L++AL K   L  A
Sbjct: 806 GGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 110/236 (46%)

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             ++S   +  ++D A  +   M     +P+   + VLI    +      A  +  +M  
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            GY   V  F++L+    R G++   L L DE+KG  L P++  + + I+   K   ++ 
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 270

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +F  +LK   L P    Y  +I   CKAG + EA  +  +ME +R  P    +  +I+
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G+   G+   A  + +++   GC P  ++ NS+++CL K    +EA  + +   +D
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD 386


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 208/427 (48%), Gaps = 8/427 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  +    +   M+  GH P+       V +    G    A   +  F
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRA---MQYF 163

Query: 218 RPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           R   E    + ++N L++ L K N   EA  M +E       PD  T+N LI GL +   
Sbjct: 164 RESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR 223

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A +    M      P++VTYNTLI G C+       H+L++ +  +S   PDVVT+ 
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERM-IQSGTHPDVVTFN 282

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+ISG+C+  K+DKA  + + M      P+ VT+NVLI G    G    A  +   M   
Sbjct: 283 SLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGR 342

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G LPD++T++SLI  +CRN Q+ Q  ++ + M  + + P+  ++  L  AL K  R ++A
Sbjct: 343 GILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEA 402

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L  +     +P  F +N +++G C +  +DEA  ++A M    C P   T+ +L+ G
Sbjct: 403 FALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTG 462

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR--ASEDQNL 574
            C  GR+ +A  +   M+  G  P   +  +++  L + G  + A     +  A+E +  
Sbjct: 463 LCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKAC 522

Query: 575 QLPSWKK 581
             PS++K
Sbjct: 523 D-PSYQK 528



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 181/340 (53%), Gaps = 9/340 (2%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLY---SQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           N++   L    + D +++ F+   R +   S  + +T N L++ L +     +A++ F D
Sbjct: 35  NTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRD 94

Query: 287 --MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +G   C  + +TYNTLI G C+  ++ R  +LL E+K +   SPDVVT++S++   C 
Sbjct: 95  ELLGQH-CDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGH-SPDVVTHSSIVQALCN 152

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G + +A   + E   C   P +V FN+L+ G  K   +  A  M E M   G +PDVVT
Sbjct: 153 TGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVT 210

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++SLIDG C++ ++ +  +L + M  + + PN+ T+  LI   CK      A + ++++ 
Sbjct: 211 YNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMI 270

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            +   P    +N +I GFC+   +D+A  ++  M++  C P+ VT+ +LI G C  GR  
Sbjct: 271 QSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRAN 330

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           EA  + ++M   G  PD IT NSLI    +     +AF+I
Sbjct: 331 EACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQI 370



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 140/269 (52%), Gaps = 4/269 (1%)

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T N L+  L +     + +++ ++         + +TY ++I G+CK G M++A  +  E
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           M   G  P  VT + ++      GN+  A +Y RE   S    PD V F+ L+ G C+  
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE---SVECAPDSVLFNILVHGLCKAN 187

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           QL++  ++ +EM  + + P+V T+  LI+ LCK  R+ +AR+ L+ +    + P    YN
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I G+CK G    A+ ++  M +    PD VTF  LI G C K ++ +A  + + M + 
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            CAP+ +T N LIS L   G  NEA  ++
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELL 336



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 33/213 (15%)

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT------- 439
           +  R+ +L      + +T+++LI G+C+ G + +  +L  EMK +  SP+V T       
Sbjct: 90  QIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQA 149

Query: 440 --------------------------FTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
                                     F IL++ LCK N+L++AR+ ++++    +VP   
Sbjct: 150 LCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVV 209

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN +IDG CK+  ++EA  ++  M +++ +P+ VT+  LI G+C  G    A  +  +M
Sbjct: 210 TYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERM 269

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           ++ G  PD +T NSLIS   +    ++A  ++ 
Sbjct: 270 IQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH 302



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-NVIVAEMEEKRCKPDKVTFTILIIG 516
           R++ +    + +   F  N ++    KA    +A  +   E+  + C  + +T+  LI G
Sbjct: 55  RWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGG 114

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            C  G M  A  +  +M   G +PD +T +S++  L   G  + A +  + + E
Sbjct: 115 FCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE 168


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 182/351 (51%), Gaps = 6/351 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  +T++T     L+  L  +    +A+    +   L  Q D  ++  LI GL +IGE
Sbjct: 135 YHPDVITLTT-----LIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGE 189

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            K A +   ++      PD+V YN +I  LC+   V     L  E+  K +  P+VVTYT
Sbjct: 190 TKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAK-QIYPNVVTYT 248

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+C +G + +A  + NEM    I P   TF++LID  GK G M +A+ +   M+  
Sbjct: 249 TLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKA 308

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PDVVT++SL+DGY    ++     + + M    ++P V ++TI+I+ LCK   +++A
Sbjct: 309 YVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEA 368

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +++K  +++P    +N +IDG CK+G +     +V +M ++    D +T++ LI  
Sbjct: 369 ISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDA 428

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C    + +AI++F KM+     PD  T   LI  L KGG    A  + Q 
Sbjct: 429 LCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQH 479



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 178/357 (49%), Gaps = 1/357 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC++G   +   +   +      P+  M    + S  +      A  L S+ 
Sbjct: 176 SYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM 235

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++  +   Y +L+          EAV +  E       PD +TF+ILI  L + G++
Sbjct: 236 NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKM 295

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A      M      PD+VTYN+L+ G   VNEV     +   +  +S  +P V +YT 
Sbjct: 296 KAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMA-QSGVTPGVQSYTI 354

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK   +D+A  ++ EM    + P+ +TFN LIDG  K G +     + ++M    
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            L DV+T+SSLID  C+N  L+Q + L  +M  + + P++YT+TILI+ LCK  RL  A+
Sbjct: 415 QLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQ 474

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              + L           Y  +I GFCKAG  DEA  ++++ME+  C P+ +TF I+I
Sbjct: 475 EVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIII 531



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 210/448 (46%), Gaps = 5/448 (1%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           L+SL  ++R        K L+F  +   L     T N+++   C +G       V   + 
Sbjct: 76  LSSLVKMQRFPTAISLSKHLDFKGITSDL----VTLNILINCFCHLGQITLSFSVLATIL 131

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
             G+ P+   +   +      G+   A          E  +    Y +L+N L K     
Sbjct: 132 KRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETK 191

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A+ + +       +PD   +NI+I  L +   V +A   + +M +    P++VTY TLI
Sbjct: 192 AAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLI 251

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            G C +  +     LL E+K K+  +PDV T++ +I    K GKM  A  +   M    +
Sbjct: 252 YGFCIMGCLIEAVALLNEMKLKN-INPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYV 310

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP  VT+N L+DG+  V  +  A+Y+   M   G  P V +++ +IDG C+   +++ + 
Sbjct: 311 KPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAIS 370

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L +EMK KN+ PN  TF  LI+ LCK  R+      + +++    +     Y+ +ID  C
Sbjct: 371 LFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALC 430

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K  ++D+A  +  +M  +  +PD  T+TILI G C  GR+  A  +F  +L  G   D  
Sbjct: 431 KNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIR 490

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASED 571
           T   +IS   K G+ +EA  ++ +  ++
Sbjct: 491 TYTVMISGFCKAGLFDEALALLSKMEDN 518



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 187/365 (51%), Gaps = 1/365 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G+  AA  L+       +     MYN ++++L K     EA  ++ E       P+  
Sbjct: 186 KIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVV 245

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+  LI G   +G + +A     +M     +PD+ T++ LI  L +  ++ +  +++  V
Sbjct: 246 TYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKM-KAAKIVLAV 304

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K+   PDVVTY S++ GY  + ++  A  ++N M   G+ P   ++ ++IDG  K   
Sbjct: 305 MMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKM 364

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  + E M     +P+ +TF+SLIDG C++G++     L D+M+ ++   +V T++ 
Sbjct: 365 VDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSS 424

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+ALCK   L+ A    K++   ++ P  + Y  +IDG CK G +  A  +   +  K 
Sbjct: 425 LIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKG 484

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              D  T+T++I G C  G   EA+++ +KM   GC P+ IT + +I  L +    ++A 
Sbjct: 485 YHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAE 544

Query: 563 RIMQR 567
           ++++ 
Sbjct: 545 KLLRE 549



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 169/352 (48%), Gaps = 34/352 (9%)

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
            N+ ++AV +F     +   P T+ FN ++  L ++     A      +   G + D+VT
Sbjct: 47  HNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVT 106

Query: 299 YNTLISGLCRVNEVA-----------RGH------------------ELLKEVKFKS--- 326
            N LI+  C + ++            RG+                  E+ K +KF     
Sbjct: 107 LNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVV 166

Query: 327 --EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
             EF  D ++Y ++I+G CK+G+   A  +   +    IKP  V +N++ID   K   + 
Sbjct: 167 ALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVG 226

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  +   M +    P+VVT+++LI G+C  G L + + L +EMK KN++P+VYTF+ILI
Sbjct: 227 EACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILI 286

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +AL KE ++  A+  L  +    + P    YN ++DG+     V  A  +   M +    
Sbjct: 287 DALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT 346

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           P   ++TI+I G C    + EAIS+F +M      P+ IT NSLI  L K G
Sbjct: 347 PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSG 398



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 156/306 (50%), Gaps = 1/306 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C MG       + + M+     P+       + +  + GK  AAK +L+  
Sbjct: 246 TYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVM 305

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      YNSL++     N    A Y+F    +    P   ++ I+I GL +   V
Sbjct: 306 MKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMV 365

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M      P+ +T+N+LI GLC+   +A   +L+ +++ +S+ + DV+TY+S
Sbjct: 366 DEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLA-DVITYSS 424

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK   +D+A  ++ +M +  I+P   T+ +LIDG  K G +  A+ + + +L  G
Sbjct: 425 LIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKG 484

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y  D+ T++ +I G+C+ G  ++ L L  +M+     PN  TF I+I AL +++  + A 
Sbjct: 485 YHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAE 544

Query: 458 RFLKQL 463
           + L+++
Sbjct: 545 KLLREM 550



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 162/340 (47%), Gaps = 1/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++ SLC+  L      ++  M +    PN       +      G    A  LL++ +
Sbjct: 212 YNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMK 271

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    + ++ L++AL K+     A  +     + Y +PD  T+N L+ G   + EVK
Sbjct: 272 LKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVK 331

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   F  M   G +P + +Y  +I GLC+   V     L +E+K K+   P+ +T+ S+
Sbjct: 332 HAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVI-PNTITFNSL 390

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G++     + ++M         +T++ LID   K  ++  A  + ++M++   
Sbjct: 391 IDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEI 450

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD+ T++ LIDG C+ G+L    ++   +  K    ++ T+T++I+  CK    ++A  
Sbjct: 451 QPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALA 510

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            L +++ N  +P    ++ +I    +    D+A  ++ EM
Sbjct: 511 LLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREM 550



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 127/283 (44%), Gaps = 1/283 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+++++ +L + G   + ++V   M      P+       V       +   A
Sbjct: 274 NINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHA 333

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K + +      VT     Y  +++ L K    DEA+ +F+E       P+T TFN LI G
Sbjct: 334 KYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDG 393

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +   ++    M       D++TY++LI  LC+   + +   L K++    E  P
Sbjct: 394 LCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKM-ITQEIQP 452

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+ TYT +I G CK G++  A  ++  +   G      T+ V+I GF K G    A  + 
Sbjct: 453 DMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALL 512

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +M   G +P+ +TF  +I       + ++  KL  EM  + L
Sbjct: 513 SKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 3/223 (1%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VF+ M   G  P        +    +    D A  L  + +   V  +T  +NSL++ L 
Sbjct: 336 VFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLC 395

Query: 238 KQNNADEAVYMFKEYFRLYSQ-PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
           K       V+   +  R  SQ  D  T++ LI  L +   + +A   F  M +    PD+
Sbjct: 396 KSGRI-AYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDM 454

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            TY  LI GLC+   +    E+ + +  K  +  D+ TYT +ISG+CK G  D+A  + +
Sbjct: 455 YTYTILIDGLCKGGRLKIAQEVFQHLLIKG-YHLDIRTYTVMISGFCKAGLFDEALALLS 513

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +M   G  P+A+TF+++I    +      AE +   M++ G L
Sbjct: 514 KMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 73/159 (45%)

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y  +   N  + L + M      P  + F  ++++L K  R   A    K L +  +   
Sbjct: 44  YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
               N +I+ FC  G +  +  ++A + ++   PD +T T LI G C++G + +A+   +
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHD 163

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            ++ +    D I+  +LI+ L K G    A ++M+   E
Sbjct: 164 DVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEE 202



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 82/224 (36%), Gaps = 35/224 (15%)

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A  ++N M      P    FN ++    K+    +A  + + +   G   D+VT + L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ +C  GQ+     +   +  +   P+V T T LI  LC    +  A +F      +D+
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKF-----HDDV 165

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           V   F                              + D++++  LI G C  G    AI 
Sbjct: 166 VALEF------------------------------QLDRISYGTLINGLCKIGETKAAIQ 195

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +   +      PD +  N +I  L K  +  EA  +    +  Q
Sbjct: 196 LMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQ 239


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 193/375 (51%), Gaps = 11/375 (2%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDT 261
           RAG    +  + +  +   V+ S   +NSLL  L+K+   + A  ++ E    Y   PDT
Sbjct: 161 RAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDT 220

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +TFNILI+G    G V   F  F D+  FGC PD+VTYNTL+ GLCR  +V   + ++K 
Sbjct: 221 FTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKG 280

Query: 322 VKFKS-EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           +  KS + +P+VVTYT++I GYC   +++KA  ++ EM + G+K + +T+N LI G  + 
Sbjct: 281 MGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEA 340

Query: 381 GNMVSAEYMRERMLSFG-YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
                 + + E     G + PD  TF++L+  +C  G L+  LK+ + M    + P+  T
Sbjct: 341 RKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSAT 400

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVP-----KPFM--YNPVIDGFCKAGNVDEAN 492
           ++ L+ +LC+      A   L +L    ++      KP +  YNP+    C+ G   +A 
Sbjct: 401 YSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAE 460

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               ++  +R   D  ++  LI+GHC +G       +   MLR    PD  T  SLI+ L
Sbjct: 461 KAFRQLM-RRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGL 519

Query: 553 LKGGMPNEAFRIMQR 567
           L    P  A + +++
Sbjct: 520 LHMDKPLLALQSLEK 534



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 180/372 (48%), Gaps = 21/372 (5%)

Query: 229 YNSLLNALVKQ---NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           Y S+L  L +    N A   ++  ++  R   + +   FN L++  +R G  +++ + F 
Sbjct: 114 YFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFT 173

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M S G SP +VT+N+L++ L +        ++  E+      +PD  T+  +I G+C  
Sbjct: 174 IMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMN 233

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM--LSFGYLPDVV 403
           G +D    I+N+++  G +P  VT+N L+DG  + G +  A  + + M   S    P+VV
Sbjct: 234 GMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVV 293

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+++LI GYC   ++ + L + +EM  + L  N  T+  LI  LC+  +    +  L+  
Sbjct: 294 TYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGT 353

Query: 464 KWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
             +    P    +N ++   C AGN+D+A  +   M E + +PD  T++ L+   C  G 
Sbjct: 354 AGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGH 413

Query: 523 MVEAISIFNKMLRI-------GCAPDDITVNSLISCLLKGG---MPNEAFR-IMQRASED 571
             +A  + +K+L         GC P     N +   L + G      +AFR +M+R ++D
Sbjct: 414 YEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQD 473

Query: 572 QNLQLPSWKKAV 583
                PS+K  +
Sbjct: 474 P----PSYKTLI 481



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/446 (23%), Positives = 180/446 (40%), Gaps = 67/446 (15%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-F 217
           +N +MR+    GL      VF  M+S G  P+       ++  ++ G+ + AK +  +  
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG-- 275
               VT  TF +N L+         D+   +F +  R   +PD  T+N L+ GL R G  
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 276 -----------------------------------EVKKAFEFFYDMGSFGCSPDIVTYN 300
                                              E++KA   F +M + G   + +TYN
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           TLI GLC   +  +  ++L+       FSPD  T+ +++  +C  G +D A  ++  M+ 
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             I+P + T++ L+    + G+   AE + +++L    L                     
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL--------------------- 430

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
                  + G    P V  +  +   LC+  +   A +  +QL        P  Y  +I 
Sbjct: 431 -------LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIM 482

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK G  +    ++  M  K   PD  T+  LI G     + + A+    KMLR    P
Sbjct: 483 GHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRP 542

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  T +S+++ LL+ G  +E+  ++Q
Sbjct: 543 NSSTFHSILAKLLEQGRTSESASLIQ 568



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 173/428 (40%), Gaps = 15/428 (3%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           ++ LN +  TY  ++R  C     +    VF+ M + G   N+      +     A K +
Sbjct: 285 SVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFE 344

Query: 209 AAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
             K +L +   G+ T S  T  +N+L++      N D+A+ +F+    L  QPD+ T++ 
Sbjct: 345 KIKDIL-EGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSA 403

Query: 267 LIQGLSRIGEVKKAFEFFYD-------MGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           L++ L + G  +KA +           +   GC P +  YN +   LC   +  +  +  
Sbjct: 404 LVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF 463

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +++  +   + D  +Y ++I G+CK G  +    +   M      P   T+  LI+G   
Sbjct: 464 RQLMRRG--TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLH 521

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           +   + A    E+ML   + P+  TF S++      G+ ++   L   M  KN+  N+  
Sbjct: 522 MDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSF 581

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
            T  +  L      + A + +  L       K      +I   C    V + + ++    
Sbjct: 582 STGCVRLLFGAGMNDKAFQLVHLLYGKGYSVK---MEELIRYLCHCRKVIQGSKLLLFSL 638

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E     D      +I   C   ++ EA S++ K++ +G        N L   L  G    
Sbjct: 639 ESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLE 698

Query: 560 EAFRIMQR 567
           EA  + +R
Sbjct: 699 EAEFVSKR 706


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 203/414 (49%), Gaps = 4/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y +VMR LC     D    +   M++ G   +       +     A + D A  LL + 
Sbjct: 117 SYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEM 176

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  +Y+ LL    +     +   +F+E  RL  +PD   F   I  L + G +
Sbjct: 177 CGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRI 236

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA +    M   G  P++VTYN LI+ LC+   V     L  E+  K   +PDVVTY +
Sbjct: 237 GKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKG-VAPDVVTYNT 295

Query: 338 VISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +I+G   + +MD A G+  EM      ++P  VTFN +I G  K+G M  A  +RE M  
Sbjct: 296 LIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAE 355

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G + ++VT++ LI G+ R  ++N  + L  E+    L P+ +T++ILIN   K   ++ 
Sbjct: 356 RGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDR 415

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A  FL+ +    +  + F Y P++   C+ G +++A V+  EM +  C  D V ++ ++ 
Sbjct: 416 AEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMY 474

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           G C  G +  A  +   ML  G APD +T + LI+   K G   EA R++++ +
Sbjct: 475 GACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMA 528



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 191/418 (45%), Gaps = 49/418 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC------DAAK 211
           TY  ++R LC+    D    +   M   G  PN       V SC+  G C      D +K
Sbjct: 152 TYGTLIRGLCDAAELDGALELLGEMCGSGVHPN-----VIVYSCLLRGYCRSGRWQDVSK 206

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
                 R G V     M+   ++ L K+    +AV +     +   +P+  T+N+LI  L
Sbjct: 207 VFEEMSRLG-VEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCL 265

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSP 330
            + G V++A     +M   G +PD+VTYNTLI+GL  V E+     LL+E ++  +   P
Sbjct: 266 CKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEP 325

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DVVT+ SVI G CK+G+M +A  +   M   G   + VT+N LI GF +V  +  A  + 
Sbjct: 326 DVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLM 385

Query: 391 ERMLSFGYLPDVVTFSSLIDGY-----------------------------------CRN 415
             ++S G  PD  T+S LI+G+                                   C+ 
Sbjct: 386 SELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQL 445

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G + Q + L +EM   N   +   ++ ++   CK   +  A++ L+ +    L P    Y
Sbjct: 446 GMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTY 504

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           + +I+ F K G+++EA  ++ +M      PD   F  LI G+  +G++ + + + ++M
Sbjct: 505 SILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEM 562



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 38/348 (10%)

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           L  L+++  AD A  + +   RL + P T   ++L    S + +V+              
Sbjct: 36  LAVLLRRGRADAAALLNR---RLRAAPVTEACSLL----SALPDVR-------------- 74

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--------PDVVTYTSVISGYCK 344
             D V+YN +++ LCR     RG +L + +   ++ S        P+ V+YT V+ G C 
Sbjct: 75  --DAVSYNIVLAALCR-----RGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCA 127

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
             + D+A  +   M + G++   VT+  LI G      +  A  +   M   G  P+V+ 
Sbjct: 128 SRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIV 187

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +S L+ GYCR+G+     K+ +EM    + P+V  FT  I+ LCK+ R+  A +    + 
Sbjct: 188 YSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMV 247

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              L P    YN +I+  CK G+V EA  +  EM++K   PD VT+  LI G      M 
Sbjct: 248 QRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMD 307

Query: 525 EAISIFNKMLR--IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            A+ +  +M++      PD +T NS+I  L K G   +A  + +  +E
Sbjct: 308 GAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAE 355



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 152/324 (46%), Gaps = 39/324 (12%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  +  TYN+++  LC+ G       + + M   G  P+       ++      + 
Sbjct: 247 VQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEM 306

Query: 208 DAAKGLLSQFRPGE--VTMSTFMYNSLLNALVKQNNADEAV------------------- 246
           D A GLL +   G+  V      +NS+++ L K     +A+                   
Sbjct: 307 DGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYN 366

Query: 247 YMFKEYFRLYS----------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           Y+   + R++                 +PD++T++ILI G S++ EV +A  F   M   
Sbjct: 367 YLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQR 426

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   ++  Y  L++ LC++  + +   L  E+        D V Y++++ G CK G +  
Sbjct: 427 GIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKA 484

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +  +M   G+ P AVT+++LI+ F K+G++  AE + ++M + G++PDV  F SLI 
Sbjct: 485 AKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIK 544

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLS 434
           GY   GQ+N+ L L  EM+ KN++
Sbjct: 545 GYSAEGQINKILDLIHEMRAKNVA 568



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 161/369 (43%), Gaps = 43/369 (11%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E SR  L +      +   +  LC+ G       V D M   G  PN       ++  
Sbjct: 208 FEEMSR--LGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCL 265

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR--LYSQP 259
            + G    A  L ++     V      YN+L+  L      D A+ + +E  +     +P
Sbjct: 266 CKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEP 325

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  TFN +I GL +IG +++A      M   GC  ++VTYN LI G  RV++V     L+
Sbjct: 326 DVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLM 385

Query: 320 KEVKFKSEFSPDVVTYTSVISGY-----------------------------------CK 344
            E+   S   PD  TY+ +I+G+                                   C+
Sbjct: 386 SEL-ISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQ 444

Query: 345 LGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           LG M++A  ++NEM+ +CG+   AV ++ ++ G  K G++ +A+ + + ML  G  PD V
Sbjct: 445 LGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAV 502

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+S LI+ + + G L +  ++  +M      P+V  F  LI     E ++N     + ++
Sbjct: 503 TYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEM 562

Query: 464 KWNDLVPKP 472
           +  ++   P
Sbjct: 563 RAKNVAIDP 571


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 197/368 (53%), Gaps = 7/368 (1%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G+  AA  LL +     V +   MY+++++++ K  N ++A  ++ E        +  
Sbjct: 187 KVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIV 246

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELL 319
           T++ LI G   +G++K A   F  M S   +PD+ T+N L+   C   RV E   G  ++
Sbjct: 247 TYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMM 306

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
                K    PD+VTY S++ GYC + +++ A  I N M+  G+  +  ++N++I+GF K
Sbjct: 307 ----MKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCK 362

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           +  +  A  + + M      P+V+T++SLIDG C++G+++  L+L D M  +   P++ T
Sbjct: 363 IKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIIT 422

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ +++ALCK + ++ A   L +LK   + P  + Y  +IDG CK G +++A  I  ++ 
Sbjct: 423 YSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLL 482

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K       T+T++I G C  G   EA+S+ +KM    C PD IT   +I  L      +
Sbjct: 483 VKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEND 542

Query: 560 EAFRIMQR 567
           +A ++++ 
Sbjct: 543 KAEKLLRE 550



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 190/360 (52%), Gaps = 7/360 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS-DGHLPNSPMIEF--FVSSCIRAGKCDAAKGLL 214
           +Y  ++  LC++G     +   + +R  DG L    ++ +   + S  +    + A  L 
Sbjct: 177 SYGTLINGLCKVG---ETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     ++ +   Y++L++         +A+ +F +       PD +TFNIL+    + 
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G VK+A      M   G  PDIVTYN+L+ G C VNEV     +L  +  +   +  V +
Sbjct: 294 GRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG-VTATVRS 352

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  VI+G+CK+  +D+A  ++ EM+   I P+ +T+N LIDG  K G +  A  + + M 
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMH 412

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD++T+SS++D  C+N  +++ + L  ++K + + PN+YT+TILI+ LCK  RL 
Sbjct: 413 DRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLE 472

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DAR   + L           Y  +I GFC  G  DEA  ++++M++  C PD +T+ I+I
Sbjct: 473 DARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 204/410 (49%), Gaps = 11/410 (2%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ----- 216
           ++ SL +   + +V  +F  M   G  PN       ++   + G    A  +L++     
Sbjct: 76  ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  +T++TF+    L   + Q     A+    +   L    D  ++  LI GL ++GE
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQ-----ALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 190

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A E    +       D+V Y+T+I  +C+   V    +L  E+      S ++VTY+
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEM-VSRRISSNIVTYS 249

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++ISG+C +GK+  A G++N+M S  I P   TFN+L+D F K G +  A+     M+  
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD+VT++SL+DGYC   ++N    + + M  + ++  V ++ I+IN  CK   ++ A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  K++    + P    YN +IDG CK+G +  A  ++  M ++  +PD +T++ ++  
Sbjct: 370 MKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDA 429

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C    + +AI++  K+   G  P+  T   LI  L KGG   +A  I +
Sbjct: 430 LCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFE 479



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 207/421 (49%), Gaps = 9/421 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +F  +N+++   C++GL      V   +   G+ P++  +  F+      G+   A    
Sbjct: 104 NFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFH 163

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +       +    Y +L+N L K      A+ + +       Q D   ++ +I  + + 
Sbjct: 164 DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKD 223

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-FSPDVV 333
             V  AF+ + +M S   S +IVTY+ LISG C V ++     L    K  SE  +PDV 
Sbjct: 224 KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN--KMTSENINPDVY 281

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T+  ++  +CK G++ +A      M   GIKP  VT+N L+DG+  V  +  A+ +   M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G    V +++ +I+G+C+   ++Q +KL  EM  K + PNV T+  LI+ LCK  R+
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A   +  +      P    Y+ ++D  CK   VD+A  ++ +++++  +P+  T+TIL
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS---LISCLLKGGMPNEAFRIMQRASE 570
           I G C  GR+ +A +IF  +L  G    ++TVN+   +I      G+ +EA  ++ +  +
Sbjct: 462 IDGLCKGGRLEDARNIFEDLLVKGY---NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKD 518

Query: 571 D 571
           +
Sbjct: 519 N 519



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 170/361 (47%), Gaps = 5/361 (1%)

Query: 216 QFRPGEVTMSTFMY--NSLLNALVKQNNAD--EAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           +F P +   +T  Y  +S   +    NN D  +AV +F    R    P    F  ++  L
Sbjct: 21  KFHPFQFPENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSL 80

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +          F  M   G  P+ V +N LI+  C++  +     +L ++  K  + PD
Sbjct: 81  VKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKI-LKMGYEPD 139

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            +T  + I G+C  G++ +A   ++++ + G     V++  LI+G  KVG   +A  +  
Sbjct: 140 TITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLR 199

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           R+       DVV +S++ID  C++  +N    L  EM  + +S N+ T++ LI+  C   
Sbjct: 200 RVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVG 259

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +L DA     ++   ++ P  + +N ++D FCK G V EA   +A M ++  KPD VT+ 
Sbjct: 260 KLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYN 319

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            L+ G+C+   +  A SI N M   G      + N +I+   K  M ++A ++ +     
Sbjct: 320 SLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHK 379

Query: 572 Q 572
           Q
Sbjct: 380 Q 380



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 146/304 (48%), Gaps = 18/304 (5%)

Query: 265 NILIQGLSRIGEVKK--AFEF-----FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           ++L++ + R+   KK   F+F     FY + SF  S      N ++  +   N + R + 
Sbjct: 7   SMLLRSVFRVSVPKKFHPFQFPENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNP 66

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
                      +P  + +  ++    K         ++ +M   GIKP+ V FN+LI+ F
Sbjct: 67  -----------TPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCF 115

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            ++G +  A  +  ++L  GY PD +T ++ I G+C  GQ++Q L   D++       + 
Sbjct: 116 CQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQ 175

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            ++  LIN LCK      A   L+++    +     MY+ +ID  CK  NV++A  + +E
Sbjct: 176 VSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSE 235

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  +R   + VT++ LI G C+ G++ +AI +FNKM      PD  T N L+    K G 
Sbjct: 236 MVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR 295

Query: 558 PNEA 561
             EA
Sbjct: 296 VKEA 299



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 185/416 (44%), Gaps = 31/416 (7%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+N+++ + C+ G     +     M   G  P+       +       + + A
Sbjct: 275 NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMA 334

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K +L+      VT +   YN ++N   K    D+A+ +FKE       P+  T+N LI G
Sbjct: 335 KSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDG 394

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-FS 329
           L + G +  A E    M   G  PDI+TY++++  LC+ + V +   LL  +K K +   
Sbjct: 395 LCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL--IKLKDQGIR 452

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P++ TYT +I G CK G+++ A  I+ ++   G   +  T+ V+I GF   G    A  +
Sbjct: 453 PNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSL 512

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL---------------- 433
             +M     +PD +T+  +I       + ++  KL  EM  + L                
Sbjct: 513 LSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMA 572

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P  +     +     +   N A+  L+++  + ++ K  M         +  +V+  +V
Sbjct: 573 APAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNM---------RDKDVECPSV 623

Query: 494 IV---AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           I+    +  ++    D  T+T++I G C  G   E++++ +KM   GC PD +T +
Sbjct: 624 IIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 199/394 (50%), Gaps = 1/394 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  VM  L + G  +    +   M      P+       + +  +    DAA  LL++ +
Sbjct: 171 YGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMK 230

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + F YNSL++ L K    ++   +  E   L   P+  TF+ILI GL + G+V+
Sbjct: 231 QKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVE 290

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A E    M   G  PDI+TY+ ++ G C   +V R   +   ++ K    P++ +Y+ +
Sbjct: 291 DADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG-IKPNIFSYSIL 349

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+GYCK   + KA  ++ E++  G+KP  VT++ ++ G  +VG +  A+ + + ML  G 
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD+   S+L+ GY + G + + + L  +++      N+  +T++IN LCK +R+ +A  
Sbjct: 410 TPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHA 469

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             ++L    L+P    YN +I GFC+ G  DE   I+ +ME+  C  + +T+ +++ G  
Sbjct: 470 IFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFF 529

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              ++ E +S   +M   G + D  T   LI+ L
Sbjct: 530 RSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 224/451 (49%), Gaps = 41/451 (9%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV--SSCIRAGKCDAAKGLLSQ 216
           ++ + +++  M  + +V  +F  MR  G +P S  I   V  S C+R  + D A  +L  
Sbjct: 65  FSKLFKTMINMKHYSAVVSLFREMRILG-IPISDSILNIVTNSYCLRH-RIDCAFSVLPI 122

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSRIG 275
           +    +  +   +N+LL  L  +N   +AV +FK+  R    +P+   +  ++ GLS+ G
Sbjct: 123 YLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRG 182

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             +K       M      PD+ TY+ +I  LC+   +     LL E+K K+   P++ TY
Sbjct: 183 HTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKN-IPPNIFTY 241

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            S+I G CKLG+ +K   + +EM +  I P+  TF++LIDG  K G +  A+ +   M+ 
Sbjct: 242 NSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIE 301

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD++T+S+++DGYC  GQ+++  ++ + ++ K + PN+++++ILIN  CK+  L  
Sbjct: 302 KGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAK 361

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN---------------------------- 487
           A +   ++    L P    Y+ ++ G  + G                             
Sbjct: 362 AMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLF 421

Query: 488 -------VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
                  V+EA ++ +++E  R   +   +T++I G C   R+ EA +IF K+  IG  P
Sbjct: 422 GYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIP 481

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           D  T N +I+   + G+ +E   I+++  ++
Sbjct: 482 DVRTYNVMITGFCREGLFDEVKGILRKMEDN 512



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 199/413 (48%), Gaps = 5/413 (1%)

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
           E+   D    +F  M     LP+         + I      A   L  + R   + +S  
Sbjct: 39  EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           + N + N+   ++  D A  +   Y +     +  TFN L+ GL    +V  A   F  +
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158

Query: 288 GSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
                C P+ V Y T+++GL +     +   LL+ ++ +    PDV TY+ VI   CK  
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIME-QGNTKPDVRTYSIVIDALCKDI 217

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +D A  + NEM    I P+  T+N LIDG  K+G     + +   M++    P+V TFS
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LIDG C+ G++    ++   M  K + P++ T++ +++  C   +++ ARR    L+  
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK 337

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            + P  F Y+ +I+G+CK  N+ +A  +  E+ +K  KPD VT++ ++ G    GR+ +A
Sbjct: 338 GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDA 397

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQL 576
             IF++MLR+G  PD    ++L+    K G+  EA   F  ++R  ED N+  
Sbjct: 398 KKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISF 450



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 159/312 (50%), Gaps = 2/312 (0%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           +K L    VNL++N +  T+++++  LC+ G  +    V  +M   G  P+       + 
Sbjct: 257 VKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMD 316

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
                G+ D A+ + +  R   +  + F Y+ L+N   K+ N  +A+ +F E  +   +P
Sbjct: 317 GYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKP 376

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           DT T++ ++ GL  +G +  A + F +M   G +PDI  ++TL+ G  +   V     L 
Sbjct: 377 DTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLF 436

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            +++   E   ++  YT VI+G CK  ++ +A  I+ ++ S G+ P   T+NV+I GF +
Sbjct: 437 SKLERNRE-DTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCR 495

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G     + +  +M   G   + +T++ ++ G+ R+ ++++ +    EM G+  S +  T
Sbjct: 496 EGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATT 555

Query: 440 FTILINALCKEN 451
             +LIN L KEN
Sbjct: 556 TGVLINVL-KEN 566


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 209/415 (50%), Gaps = 6/415 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN+++  LC+ G    V  V++ M ++   P+       +    R+G  D A  + 
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     + +   MYNSL+    +     EA + F +        +  T+NI+I+GL   
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA-WKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 275 GEVKKAFEFFYDM--GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           G V +A E  +D+      C PD VT+ TLI GLC+     +   + +E +   +   DV
Sbjct: 382 GMVDEAIEL-WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK-QLDV 439

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            +Y+S+I+G C +G++  A  +Y +M+  G KP++  +N LI GF +V     A  +  +
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSK 499

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  P V+T+++LIDG C+  +  +   +  EM     +P++ T+  LI  L  + +
Sbjct: 500 MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKK 559

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFT 511
           ++DA    KQ+ +  L     M+N +I G C AG VDEA  + ++M+EK+ C P+ VT+ 
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYN 619

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            L+ G    G + +A +++  +   G  PD I+ N+ I  L      +E  +++ 
Sbjct: 620 TLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 203/417 (48%), Gaps = 8/417 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN+V+RSLC  G  D    +FD +R     P+       +    +  + D A  LL
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLL 216

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSR 273
            +     V      YN+LL    K    ++ + ++ +  +   ++P+  T+N+++ GL +
Sbjct: 217 DEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G  K+  E +  M +    PD++TY  LI GLCR  +V     +  E+  K+    D  
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI-IKTGLVIDAA 335

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF---GKVGNMVSAEYMR 390
            Y S++ G+C+ G++ +A   ++     G++ +  T+N++I G    G V   +    + 
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E+      +PD VTF +LI G C+NG  N+   + +E +      +V++++ +IN LC  
Sbjct: 395 EK--DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV 452

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            RL DA +  +++  +   P   +YN +I GFC+     +A  I ++M +  C P  +T+
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             LI G C   +  EA S+  +M+  G  PD  T  SLI  L      ++A  I ++
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQ 569



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 174/378 (46%), Gaps = 35/378 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN +L +L  + + D AV +F    R    PD  T++ L+ GL++   +  A +   +M 
Sbjct: 161 YNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMP 220

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                PD+V YN L+ G  +  E  +   +  ++       P++ TY  ++ G CK G+ 
Sbjct: 221 RSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRF 280

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +   ++  M +  ++P  +T+ +LI G  + G++  A  +   ++  G + D   ++SL
Sbjct: 281 KEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340

Query: 409 IDGYCRNGQLNQGLKLCDE---------------MKG------------------KNLS- 434
           + G+C+ G++ +  K  D                +KG                  K+++ 
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400

Query: 435 -PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+  TF  LI+ LC+    N A    ++ + +      F Y+ +I+G C  G + +A  
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  +M++  CKP+   +  LI G C   R  +A+ I++KM   GC+P  IT N+LI  L 
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520

Query: 554 KGGMPNEAFRIMQRASED 571
           K     EA  + +   E+
Sbjct: 521 KAEKYQEASSVAREMVEN 538



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 167/339 (49%), Gaps = 9/339 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           + +TYN++++ L + G+ D    ++D +  D   +P++      +    + G  + A  +
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTI 426

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             + R     +  F Y+S++N L       +AV ++++  +   +P++  +N LI G  +
Sbjct: 427 FEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQ 486

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +     A   +  M   GCSP ++TYNTLI GLC+  +      + +E+  ++ F+PD+ 
Sbjct: 487 VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM-VENGFTPDIT 545

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY----M 389
           TY S+I G     K+D A  I+ ++   G+K   +  N+LI G    G +  A +    M
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM 605

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           +E+       P++VT+++L+DG    G +++   L   +    L P++ ++   I  LC 
Sbjct: 606 KEKK---NCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCS 662

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
            +R+++  + L ++    ++P    +N ++    K G +
Sbjct: 663 CDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 152/343 (44%), Gaps = 40/343 (11%)

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHEL---LKE 321
           +++   SR      A + F  + S  GC+P I ++N L+    R    +        L  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
             F    +P++ TY  V+   C  G +D+A  +++ +    + P  +T++ L+ G  K  
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTF 440
            +  A  + + M      PDVV +++L+ G  + G+  + +++ D++ K     PN+ T+
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            ++++ LCK  R  +     +++  N+L P    Y  +I G C++G+VD A  + +E+ +
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEA--------------ISIFNKMLR----------- 535
                D   +  L+ G C  GR+ EA              +  +N M++           
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEA 387

Query: 536 ----------IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
                     + C PD +T  +LI  L + G  N+AF I + A
Sbjct: 388 IELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEA 430



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWND----LVPKPFMYNPVIDGFCKAGNVD 489
           +P + +   L++A  +  R +DA  F   L        + P    YN V+   C  G++D
Sbjct: 116 NPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLD 175

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A  +   +  ++  PD++T++ L+ G   + R+  A+ + ++M R    PD +  N+L+
Sbjct: 176 RAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALL 235

Query: 550 SCLLKGGMPNEAFRIMQRASED 571
               K G   +  R+  +  +D
Sbjct: 236 GGCFKAGEFEKVMRVWDKLVKD 257


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 181/343 (52%), Gaps = 3/343 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           S +  N++L ++VK    D +V+ F KE  +    PD  TFNILI  L   G  +K+   
Sbjct: 157 SVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G +P IVTYNT++   C+        ELL  +K K     DV TY  +I   C
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLC 274

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           +  ++ K   +  +M    I P+ VT+N LI+GF   G ++ A  +   MLSFG  P+ V
Sbjct: 275 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 334

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           TF++LIDG+   G   + LK+   M+ K L+P+  ++ +L++ LCK    + AR F  ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           K N +      Y  +IDG CK G +DEA V++ EM +    PD VT++ LI G C  GR 
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             A  I  ++ R+G +P+ I  ++LI    + G   EA RI +
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 207/420 (49%), Gaps = 3/420 (0%)

Query: 153 NHSFKTYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           N +   Y++++R     G+  DS+++ F  M   G  P+       + S +++G+  +  
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEI-FRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             L +    ++      +N L+N L  + + +++ Y+ ++  +    P   T+N ++   
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G  K A E    M S G   D+ TYN LI  LCR N +A+G+ LL++++ K    P+
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR-KRMIHPN 297

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VTY ++I+G+   GK+  A+ + NEM S G+ P+ VTFN LIDG    GN   A  M  
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M + G  P  V++  L+DG C+N + +        MK   +     T+T +I+ LCK  
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L++A   L ++  + + P    Y+ +I+GFCK G    A  IV  +      P+ + ++
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI   C  G + EAI I+  M+  G   D  T N L++ L K G   EA   M+  + D
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC  G  +    +   M   G+ P        +    + G+  AA  LL   
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V      YN L++ L + N   +   + ++  +    P+  T+N LI G S  G+V
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   +M SFG SP+ VT+N LI G           ++   ++ K   +P  V+Y  
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-LTPSEVSYGV 373

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK  + D A G Y  M   G+    +T+  +IDG  K G +  A  +   M   G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+S+LI+G+C+ G+     ++   +    LSPN   ++ LI   C+   L +A 
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R  + +         F +N ++   CKAG V EA   +  M      P+ V+F  LI G+
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              G  ++A S+F++M ++G  P   T  SL+  L KGG   EA + ++
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 195/471 (41%), Gaps = 74/471 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+   C+ G   +   + D+M+S G   +       +    R+ +      LL   
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  +   YN+L+N    +     A  +  E       P+  TFN LI G    G  
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE--VARGHE------------------ 317
           K+A + FY M + G +P  V+Y  L+ GLC+  E  +ARG                    
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 318 ---------------LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                          LL E+  K    PD+VTY+++I+G+CK+G+   A  I   +   G
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMS-KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 363 IKPSAV-----------------------------------TFNVLIDGFGKVGNMVSAE 387
           + P+ +                                   TFNVL+    K G +  AE
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                M S G LP+ V+F  LI+GY  +G+  +   + DEM      P  +T+  L+  L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK   L +A +FLK L          MYN ++   CK+GN+ +A  +  EM ++   PD 
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 508 VTFTILIIGHCMKGRMVEAISIFNK--MLRIGCAPDDITVNSLISCLLKGG 556
            T+T LI G C KG+ V AI +F K    R    P+ +     +  + K G
Sbjct: 649 YTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 207/426 (48%), Gaps = 4/426 (0%)

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           RV LS N     Y+ ++ + C MG       +++ M  +GH  +       V+S  +AGK
Sbjct: 466 RVGLSPNGII--YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A+  +       +  +T  ++ L+N         +A  +F E  ++   P  +T+  
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L++GL + G +++A +F   + +   + D V YNTL++ +C+   +A+   L  E+  +S
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVS 385
              PD  TYTS+ISG C+ GK   A     E  + G + P+ V +   +DG  K G   +
Sbjct: 644 -ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
             Y RE+M + G+ PD+VT +++IDGY R G++ +   L  EM  +N  PN+ T+ IL++
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              K   ++ +    + +  N ++P     + ++ G C++  ++    I+     +  + 
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D+ TF +LI   C  G +  A  +   M  +G + D  T ++++S L +     E+  ++
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882

Query: 566 QRASED 571
              S+ 
Sbjct: 883 HEMSKQ 888



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 201/477 (42%), Gaps = 70/477 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++ SLC+ G     +     M SDG LPN+   +  ++    +G+   A  +  + 
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + F Y SLL  L K  +  EA    K    + +  DT  +N L+  + + G +
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV-----------ARGHELLKEVK--- 323
            KA   F +M      PD  TY +LISGLCR  +            ARG+ L  +V    
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689

Query: 324 ----------------FKSEF-----SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                           F+ +      +PD+VT  ++I GY ++GK++K   +  EM +  
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P+  T+N+L+ G+ K  ++ ++  +   ++  G LPD +T  SL+ G C +  L  GL
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 423 KLCDEMKGKNLSPNVYTFTILINALC---------------------------------- 448
           K+      + +  + YTF +LI+  C                                  
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 449 -KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            + +R  ++R  L ++    + P+   Y  +I+G C+ G++  A V+  EM   +  P  
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           V  + ++      G+  EA  +   ML++   P   +  +L+    K G   EA  +
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 986



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 198/482 (41%), Gaps = 82/482 (17%)

Query: 178  VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            VFD M   GH P        +    + G    A+  L         + T MYN+LL A+ 
Sbjct: 565  VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624

Query: 238  KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDI 296
            K  N  +AV +F E  +    PD++T+  LI GL R G+   A  F  +  + G   P+ 
Sbjct: 625  KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684

Query: 297  VTYNTLISGLCRVNEVARGHELLKEVKFKSEF-----SPDVVTYTSVISGYCKLGKMDKA 351
            V Y   + G+ +  +   G      + F+ +      +PD+VT  ++I GY ++GK++K 
Sbjct: 685  VMYTCFVDGMFKAGQWKAG------IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 352  TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
              +  EM +    P+  T+N+L+ G+ K  ++ ++  +   ++  G LPD +T  SL+ G
Sbjct: 739  NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798

Query: 412  YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC----------------------- 448
             C +  L  GLK+      + +  + YTF +LI+  C                       
Sbjct: 799  ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858

Query: 449  ------------KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV-------- 488
                        + +R  ++R  L ++    + P+   Y  +I+G C+ G++        
Sbjct: 859  KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918

Query: 489  ---------------------------DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
                                       DEA +++  M + +  P   +FT L+   C  G
Sbjct: 919  EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978

Query: 522  RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKK 581
             ++EA+ +   M   G   D ++ N LI+ L   G    AF + +    D  L   +  K
Sbjct: 979  NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038

Query: 582  AV 583
            A+
Sbjct: 1039 AL 1040



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 175/431 (40%), Gaps = 37/431 (8%)

Query: 159  YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            YN ++ ++C+ G       +F  M     LP+S      +S   R GK   A     +  
Sbjct: 616  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 219  P-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              G V  +  MY   ++ + K       +Y  ++   L   PD  T N +I G SR+G++
Sbjct: 676  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +K  +   +MG+    P++ TYN L+ G  +  +V+    L + +       PD +T  S
Sbjct: 736  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTCHS 794

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID----------GFGKVGNMVS-- 385
            ++ G C+   ++    I       G++    TFN+LI            F  V  M S  
Sbjct: 795  LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854

Query: 386  ------------------AEYMRERMLSF-----GYLPDVVTFSSLIDGYCRNGQLNQGL 422
                                +   RM+       G  P+   +  LI+G CR G +    
Sbjct: 855  ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914

Query: 423  KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
             + +EM    + P     + ++ AL K  + ++A   L+ +    LVP    +  ++   
Sbjct: 915  VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 974

Query: 483  CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            CK GNV EA  +   M     K D V++ +LI G C KG M  A  ++ +M   G   + 
Sbjct: 975  CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1034

Query: 543  ITVNSLISCLL 553
             T  +LI  LL
Sbjct: 1035 TTYKALIRGLL 1045



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 66/150 (44%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            + Y  ++  LC +G   +  VV + M +    P +      V +  + GK D A  LL  
Sbjct: 895  RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                ++  +   + +L++   K  N  EA+ +         + D  ++N+LI GL   G+
Sbjct: 955  MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  AFE + +M   G   +  TY  LI GL
Sbjct: 1015 MALAFELYEEMKGDGFLANATTYKALIRGL 1044


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 213/420 (50%), Gaps = 3/420 (0%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           +L + KL ++  E  +    + + F  YN+++  LC+       + +F  M     +PN 
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVF-VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +    +AG+ D A GL  + +  +V  S   +NSLL+ L K    +EA  M  E
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGE-VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
                  PD +T++I+  GL +  +    A + + +    G   D  T + L++GLC+  
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           +V +  E+LK +  +    P  V Y ++++GYC++G MD+A     +M S G++P+ + F
Sbjct: 257 KVEKAEEVLKSL-VEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAF 315

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N +ID F ++  +  AE   ++M+  G  P V T++ LIDGY R    ++  ++ +EM+ 
Sbjct: 316 NSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEE 375

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
               PNV ++  LIN LCK+ ++ +A   L+ +    ++P   +YN +IDG C  G + E
Sbjct: 376 NGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLRE 435

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A     EM +       VT+  LI G C  G++ EA  +F  +   G  PD IT NSLIS
Sbjct: 436 ALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLIS 495



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 212/472 (44%), Gaps = 73/472 (15%)

Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ---- 216
           ++ S+C E  +H  V  ++D+MR +G LP+   +   V S + + K D    L  +    
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 217 -FRPG------------------------------EVTMSTFMYNSLLNALVKQNNADEA 245
            FRP                               +V  + F+YN L+  L K+    +A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             +F E       P+  TFN LI G  + GEV  A      M      P I+T+N+L+SG
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV--------------------------- 338
           LC+   +     +L E+K    F PD  TY+ +                           
Sbjct: 181 LCKARRIEEARCMLNEIKCNG-FVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVK 239

Query: 339 ---------ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
                    ++G CK GK++KA  +   +   G+ P  V +N +++G+ ++G+M  A   
Sbjct: 240 IDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILT 299

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E+M S G  P+ + F+S+ID +C    +++  +   +M GK ++P+V T+ ILI+   +
Sbjct: 300 IEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGR 359

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
               +   + L++++ N   P    Y  +I+  CK G + EA +++ +M  +   P+   
Sbjct: 360 LCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANI 419

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           + +LI G C  G++ EA+  F++M + G     +T NSLI  L K G   EA
Sbjct: 420 YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEA 471



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 177/393 (45%), Gaps = 4/393 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +N V+   CEM + D  +     M   G  P+       +    R         +L + 
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y SL+N L K     EA  + ++       P+   +N+LI G   +G++
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKL 433

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A  FF +M   G    IVTYN+LI GLC++ ++    E+   +   +   PDV+TY S
Sbjct: 434 REALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLIT-STGHCPDVITYNS 492

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGY   G   K   +Y  M   G+KP+  TF+ LI G  K G  +  E +   ML   
Sbjct: 493 LISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK-ETLFNEMLQMN 551

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD V ++++I  Y   G + +   L  EM    + P+  T+  LI    KE +L++ +
Sbjct: 552 LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETK 611

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  +K   L+P+   Y+ +I G C   + + A V   EM E    P+      L  G 
Sbjct: 612 DLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGL 671

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              GR+ EA SI ++M+  G   D++  N  +S
Sbjct: 672 RKDGRLQEAQSICSEMIANGM--DNLDTNEDLS 702



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 69/150 (46%)

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L D M+ +   P+     +++ +L +  + ++     K++      P   +Y   +   
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G++  A  +   M+ ++  P+   + +LI G C + R+ +A  +F +M      P+ 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +T N+LI    K G  + A  + +R  +++
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEK 166


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 212/437 (48%), Gaps = 13/437 (2%)

Query: 153 NHSFKTY----------NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           NH F  Y          +++M++  E G+      VFD M   G +P      F +   +
Sbjct: 143 NHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLV 202

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G+   A  +  Q     +    +M + ++NA  +    D A+ + ++  +   +P+  
Sbjct: 203 QKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVV 262

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+N L+ G    G+ +        M   G S ++VT   L+ G C+  ++    +LL+EV
Sbjct: 263 TYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV 322

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           +       D   Y  ++ GYC++G+M+ A  I +EM   G+K + V  N LI G+ K+G 
Sbjct: 323 EEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQ 382

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  AE +   M+ +   PD  ++++L+DGYCR G++++   LC+EM G  ++P V T+  
Sbjct: 383 VCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNT 442

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I  L      +DA      +    + P       ++D F K G+ D A ++  E+  + 
Sbjct: 443 VIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRG 502

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
                V F  +I G C  G+++EA ++F++M  +G +PD+IT  +L     K G   EAF
Sbjct: 503 FTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAF 562

Query: 563 RI---MQRASEDQNLQL 576
           +I   M+R +   ++++
Sbjct: 563 QIKGVMERQAMSASIEM 579



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 199/418 (47%), Gaps = 9/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V++ L ++G +D    ++  M   G  PN       +    + G  D A  L  + 
Sbjct: 439 TYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEI 498

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T ST  +N++++ L K     EA  +F     L   PD  T+  L  G  + G V
Sbjct: 499 LGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNV 558

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++AF+    M     S  I  YN+LI GL ++ ++    +LL E++ +   SP+VVTY +
Sbjct: 559 QEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRG-LSPNVVTYGT 617

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG+C   K+DKA  +Y EM   G  P+ V  + ++    +   +  A  + ++ML F 
Sbjct: 618 LISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFD 677

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN----LSPNVYTFTILINALCKENRL 453
            L      +   D   +N    +  K+ D +   +    LS N+  + I I+ LCK  +L
Sbjct: 678 ILA---VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNI-VYNIAIDGLCKSGKL 733

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++AR  L  L     +P  F Y  +I     +GNVDEA  +  EM EK   P+   +  L
Sbjct: 734 DEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNAL 793

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           I G C  G +  A  +F K+ + G  P+ +T N LI C  + G  ++A R+ ++ +E+
Sbjct: 794 INGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEE 851



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 37/413 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++      G  + V+ V   M   G   N       +    + GK D A+ LL + 
Sbjct: 263 TYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV 322

Query: 218 RPGEV-TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              E+  +   +Y  L++   +    ++AV +  E  R+  + +    N LI+G  ++G+
Sbjct: 323 EEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQ 382

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A   F  M  +   PD  +YNTL+ G CR  +V++   L +E+      +P VVTY 
Sbjct: 383 VCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEM-LGDGITPTVVTYN 441

Query: 337 SVISGYCKLGKMDKATGIY----------NEMNSC------------------------- 361
           +VI G   +G  D A  ++          NE++ C                         
Sbjct: 442 TVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGR 501

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G   S V FN +I G  K+G ++ A  + +RM   G  PD +T+ +L DGYC+NG + + 
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEA 561

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            ++   M+ + +S ++  +  LI+ L K  +LND    L +++   L P    Y  +I G
Sbjct: 562 FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           +C    +D+A  +  EM E+   P+ V  + ++       R+ EA  I +KML
Sbjct: 622 WCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKML 674



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 197/444 (44%), Gaps = 37/444 (8%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           ++V+ + C++G  D    V + M  +G  PN       V+  +  G  +  + +L     
Sbjct: 230 SIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSE 289

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSRIGEVK 278
             V+ +      L+    K+   DEA  + +E         D   + +L+ G  ++G ++
Sbjct: 290 RGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRME 349

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     +M   G   ++V  NTLI G C++ +V     +   +       PD  +Y ++
Sbjct: 350 DAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGM-VDWNLKPDCYSYNTL 408

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GYC+ GK+ KA  +  EM   GI P+ VT+N +I G   VG+   A ++   M+  G 
Sbjct: 409 LDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGV 468

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+ ++  +++D + + G  ++ + L  E+ G+  + +   F  +I+ LCK  +L +A  
Sbjct: 469 TPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGA 528

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI------------------------ 494
              ++K   L P    Y  + DG+CK GNV EA  I                        
Sbjct: 529 VFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLF 588

Query: 495 -----------VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
                      + EM+ +   P+ VT+  LI G C + ++ +A  ++ +M+  G  P+ +
Sbjct: 589 KIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVV 648

Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
             + ++S L +    +EA  I+ +
Sbjct: 649 VCSKIVSSLYRDDRISEATVILDK 672



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 137/350 (39%), Gaps = 71/350 (20%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMR--------------SDGHLPNSPMIEFF------ 197
            +N ++  LC+MG       VFD M+              SDG+  N  + E F      
Sbjct: 509 AFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVM 568

Query: 198 ---------------VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
                          +    +  K +    LL + +   ++ +   Y +L++    +   
Sbjct: 569 ERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKL 628

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-------CSPD 295
           D+A +++ E       P+    + ++  L R   + +A      M  F        CS  
Sbjct: 629 DKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDK 688

Query: 296 IV----------------------------TYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +V                             YN  I GLC+  ++     +L  V     
Sbjct: 689 LVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVL-SVLMSRG 747

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F PD  TY ++I      G +D+A  + +EM   G+ P+   +N LI+G  K+GN+  A+
Sbjct: 748 FLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQ 807

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            +  ++   G +P+ VT++ LI  YCR G L++  +L ++M  + +S  +
Sbjct: 808 RLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRI 857



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN+ +  LC+ G  D  + V   + S G LP++      + +C  +G  D A  L  + 
Sbjct: 719 VYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEM 778

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +  +YN+L+N L K  N D A  +F + ++    P+  T+NILI    RIG++
Sbjct: 779 LEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDL 838

Query: 278 KKAFEFFYDMGSFGCSPDIV 297
            KA      M   G S  I+
Sbjct: 839 DKASRLREKMTEEGISTRII 858


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 203/419 (48%), Gaps = 2/419 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-C 207
           N  L  + +T N V     EMGL    + VFD MR  G  P+S   +    +  R G+  
Sbjct: 189 NHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRIS 248

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D  + L    R G V +       +++   ++  A    + F ++  L  +P+   F  L
Sbjct: 249 DTDRWLKDMVRRGFV-VDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSL 307

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL + G +K+AFE   +M   G  P++ T+  LI GLC+     +   L  ++    +
Sbjct: 308 INGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDD 367

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           + P+V TYTS+I GYCK  K+++A  + + M   G+ P+  T+  LIDG  K GN   A 
Sbjct: 368 YKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAY 427

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M   G+  ++ T+++ ID  C+ G+  +  KL  +     L  +  T+TILI+ L
Sbjct: 428 ELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISEL 487

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+     +A  F  ++    + P    YN +I  F +   ++E+  + AE       P K
Sbjct: 488 CRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTK 547

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            T+T +I G+C    +  A+  FN+M   GC PD +T  +LIS L K    +EA ++ +
Sbjct: 548 ETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYE 606



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 146/318 (45%), Gaps = 14/318 (4%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD+ ++ ++     R+G +     +  DM   G   D  T   +IS  C     +R    
Sbjct: 229 PDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWY 288

Query: 319 L-KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
             K V+      P+++ +TS+I+G CK G + +A  +  EM   G KP+  T   LIDG 
Sbjct: 289 FDKWVELG--LKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 378 GKVGNMVSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
            K G    A  +  +++ S  Y P+V T++S+I GYC+  +LN+   L   MK + L PN
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T+T LI+   K      A   +  +         F YN  ID  CK G   EA  ++ 
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +      + D VT+TILI   C +    EA+  F+KM + G  PD  T N+LI+      
Sbjct: 467 KGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIA------ 520

Query: 557 MPNEAFRIMQRASEDQNL 574
               AF   +R  E + L
Sbjct: 521 ----AFSRQRRMEESEKL 534



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 138/306 (45%), Gaps = 4/306 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+    +  +++   M+  G +PN+      +    +AG  + A  L+   
Sbjct: 374 TYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLM 433

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + + F YN+ +++L K+    EA  + K+ FRL  Q DT T+ ILI  L R  + 
Sbjct: 434 GKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADT 493

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A  FF  M   G  PD+ TYNTLI+   R   +    +L  E        P   TYTS
Sbjct: 494 REALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEA-VGLGLVPTKETYTS 552

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+   +  A   +N M+  G  P ++T+  LI G  K   +  A  + E M+  G
Sbjct: 553 MICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKG 612

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT  +L   YC+       + + + +  K     + T   LI  LC E ++  A 
Sbjct: 613 LSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLW---IRTVNTLIRKLCSERKVGMAV 669

Query: 458 RFLKQL 463
            F  +L
Sbjct: 670 LFFHKL 675



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 5/233 (2%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           + ++GK  +A  +  EM + G+  +  T N +    G++G +  AE + + M   G  PD
Sbjct: 171 FAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPD 230

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            V++  +   YCR G+++   +   +M  +    +  T T++I+  C++     +R F  
Sbjct: 231 SVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKG--FASRVFWY 288

Query: 462 QLKWNDLVPKPFMYN--PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             KW +L  KP + N   +I+G CK G++ +A  ++ EM +K  KP+  T T LI G C 
Sbjct: 289 FDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCK 348

Query: 520 KGRMVEAISIFNKMLRI-GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           KG   +A  +F K++R     P+  T  S+I    K    N A  ++ R  E 
Sbjct: 349 KGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQ 401


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 182/342 (53%), Gaps = 1/342 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            + Y++ + A  K  + D A  +F+E  R     +  T+N++I GL R G V++AF F  
Sbjct: 243 VYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 302

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +M  +G SPD  TY  L++GLC+ + +     LL E+   S   P++V Y +++ G+ K 
Sbjct: 303 EMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC-SGLKPNIVVYGTLVDGFMKE 361

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           GK  +A  I  EM S G++P+ + ++ LI G  K+G +  A  + + M+  G  PD  T+
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           + L+ G+ +    +   +L +EM+   + PNVY++ I+IN LC+     +A   L+++  
Sbjct: 422 NPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMIS 481

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L P  FMY P+I G  K GN+  A   + +M +    PD   +  LI G    GRM E
Sbjct: 482 EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEE 541

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           A   + ++ + G  PD+ T + LI    K G   +A +++++
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQ 583



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 202/414 (48%), Gaps = 1/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+  + + C+    D+ + VF+ MR      N       +S   R+G  + A G   + 
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++   F Y +L+N L K +   EA  +  E      +P+   +  L+ G  + G+ 
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKT 364

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+   +M S G  P+ + Y+ LI GLC++ ++ R  +LLKE+  K    PD  TY  
Sbjct: 365 AEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM-IKVGLRPDTFTYNP 423

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+ +    D A  + NEM + GI P+  ++ ++I+G  + G    A  + E M+S G
Sbjct: 424 LMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG 483

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+   ++ LI G+ + G ++   +  ++M   N+ P+++ +  LI  L    R+ +A 
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAE 543

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            +  Q++   LVP  F Y+ +I G+CK GN+++A+ ++ +M     KP+  T+T L+ G+
Sbjct: 544 EYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGY 603

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
                  +  SI   ML  G  PD+     +I  L +      AF ++    ++
Sbjct: 604 FKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 657



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 196/387 (50%), Gaps = 3/387 (0%)

Query: 181 YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
           +M   G LP+      F+ +  +A   DAAK +  + R  +  M+   YN +++ L +  
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292

Query: 241 NADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
             +EA + FKE    Y   PD +T+  L+ GL +   +K+A     +M   G  P+IV Y
Sbjct: 293 AVEEA-FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVY 351

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
            TL+ G  +  + A   ++LKE+   +   P+ + Y ++I G CK+G++ +A+ +  EM 
Sbjct: 352 GTLVDGFMKEGKTAEAFDILKEM-ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G++P   T+N L+ G  +  +   A  +   M + G LP+V ++  +I+G C+NG+  
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L +EM  + L PN + +  LI    KE  ++ A   L+++   ++ P  F YN +I
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
            G    G ++EA    A+++++   PD+ T++ LI G+C  G + +A  +  +ML  G  
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLK 590

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
           P+  T   L+    K     +   I+Q
Sbjct: 591 PNADTYTDLLEGYFKSNDYEKVSSILQ 617



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 202/455 (44%), Gaps = 36/455 (7%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  L+    TY  +M  LC+       + + D M   G  PN  +    V   ++ GK 
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKT 364

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  +L +     V  +  MY++L+  L K      A  + KE  ++  +PDT+T+N L
Sbjct: 365 AEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPL 424

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +QG  +  +   AFE   +M + G  P++ +Y  +I+GLC+  E      LL+E+     
Sbjct: 425 MQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEM-ISEG 483

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+   Y  +I G+ K G +  A     +M    + P    +N LI G   VG M  AE
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAE 543

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT------ 441
               ++   G +PD  T+S LI GYC+ G L +  +L  +M    L PN  T+T      
Sbjct: 544 EYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGY 603

Query: 442 -----------------------------ILINALCKENRLNDARRFLKQLKWNDLVPKP 472
                                        I+I  L +   +  A   L +++ N LVP  
Sbjct: 604 FKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL 663

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            +Y+ +I G CK  ++++A  ++ EM ++  +P  V +  LI G C  G +  A ++F+ 
Sbjct: 664 HIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDS 723

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +L  G  P+ +T  +LI    K G   +AF + + 
Sbjct: 724 ILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKE 758



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 188/392 (47%), Gaps = 1/392 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++R LC++G       +   M   G  P++      +    +    D A  LL++ R
Sbjct: 386 YDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMR 445

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + Y  ++N L +   + EA  + +E      +P+ + +  LI G S+ G + 
Sbjct: 446 NSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNIS 505

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A E    M      PD+  YN+LI GL  V  +    E   +V+ K    PD  TY+ +
Sbjct: 506 LACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQ-KRGLVPDEFTYSGL 564

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYCK G ++KA  +  +M + G+KP+A T+  L++G+ K  +      + + ML  G 
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD   +  +I    R+  +     +  E++   L P+++ ++ LI+ LCK   +  A  
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L ++    L P    YN +IDGFC++G++  A  +   +  K   P+ VT+T LI G+C
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             G + +A  ++ +ML  G APD    N L +
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLAT 776



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 197/452 (43%), Gaps = 35/452 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M+   +    D    + + MR+ G LPN       ++   + G+   A  LL + 
Sbjct: 420 TYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEM 479

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + FMY  L+    K+ N   A    ++  +    PD + +N LI+GLS +G +
Sbjct: 480 ISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRM 539

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E++  +   G  PD  TY+ LI G C+   + +  +LL+++   S   P+  TYT 
Sbjct: 540 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM-LNSGLKPNADTYTD 598

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY K    +K + I   M   G KP    + ++I    +  NM  A  +   +   G
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 658

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD+  +SSLI G C+   + + + L DEM  + L P +  +  LI+  C+   ++ AR
Sbjct: 659 LVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 718

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI----- 512
                +    LVP    Y  +IDG CK G++ +A  +  EM ++   PD   + +     
Sbjct: 719 NVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGC 778

Query: 513 -----------------------------LIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
                                        L+ G C +G++ E   + + M+     P+  
Sbjct: 779 SDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQ 838

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           TV  ++S   K G   EA R+     + +  Q
Sbjct: 839 TVEKVVSEFGKAGKLGEAHRVFAELQQKKASQ 870



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 188/433 (43%), Gaps = 69/433 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y +++  LC+ G       + + M S+G  PN+ M    +    + G    A   L + 
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM 514

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F YNSL+  L      +EA   + +  +    PD +T++ LI G  + G +
Sbjct: 515 TKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNL 574

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK----------------- 320
           +KA +    M + G  P+  TY  L+ G  + N+  +   +L+                 
Sbjct: 575 EKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIV 634

Query: 321 ----------EVKF-------KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                     EV F       K+   PD+  Y+S+ISG CK+  M+KA G+ +EM   G+
Sbjct: 635 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGL 694

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P  V +N LIDGF + G++  A  + + +L+ G +P+ VT+++LIDG C+NG +     
Sbjct: 695 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFD 754

Query: 424 LCDEMKGKNLSP----------------------------------NVYTFTILINALCK 449
           L  EM  + ++P                                  NV  F  L++  CK
Sbjct: 755 LYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCK 814

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             +L +  + L  +   ++VP       V+  F KAG + EA+ + AE+++K+       
Sbjct: 815 RGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATD 874

Query: 510 -FTILIIGHCMKG 521
            F++L      KG
Sbjct: 875 RFSLLFTDMINKG 887



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 203/464 (43%), Gaps = 53/464 (11%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           +PKL L F  +SR  ++   S   +  +  SLC   L      +   M    H P+ P++
Sbjct: 95  HPKLLLDFFYWSRPRIA-PPSADAFARLAASLCAASLFPQANGLLHQMIL-AH-PHPPLV 151

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN---NADEAVYMFKE 251
              +   I+           +  R    + ST + + L++   K     NA + V M  +
Sbjct: 152 LASIQRAIQD----------TDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMAD 201

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
              L   P     N L++ L R   ++  ++    M   G  PD+ TY+T I   C+  +
Sbjct: 202 ---LGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARD 258

Query: 312 VARGHELLKEVK-----------------------------FKSE-----FSPDVVTYTS 337
                ++ +E++                             FK E      SPD  TY +
Sbjct: 259 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 318

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G CK  ++ +A  + +EM+  G+KP+ V +  L+DGF K G    A  + + M+S G
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ + + +LI G C+ GQL +  KL  EM    L P+ +T+  L+    +++  + A 
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L +++ + ++P  + Y  +I+G C+ G   EA  ++ EM  +  KP+   +  LIIGH
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             +G +  A     KM +    PD    NSLI  L   G   EA
Sbjct: 499 SKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEA 542



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 114/239 (47%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP       ++  Y K G +  A  +   M   G+ P+    N L+    +   M     
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           ++  M   G LPDV T+S+ I+ +C+    +   K+ +EM+ ++ + N  T+ ++I+ LC
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +   + +A  F +++    L P  F Y  +++G CK   + EA  ++ EM     KP+ V
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +  L+ G   +G+  EA  I  +M+  G  P+ I  ++LI  L K G    A ++++ 
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKE 408



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 8/174 (4%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P       L+D Y + G +    ++   M    L+P         N L K+    DA   
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRC----CNGLLKDLLRADAMEL 226

Query: 460 LKQLKW----NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           L +LK       ++P  + Y+  I+  CKA + D A  +  EM  + C  ++VT+ ++I 
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMIS 286

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           G C  G + EA     +M+  G +PD  T  +L++ L KG    EA  ++   S
Sbjct: 287 GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 60/136 (44%)

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           + + ++ SP+     +L++   K   + +A + +  +    L P     N ++    +A 
Sbjct: 163 DHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRAD 222

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            ++    +   ME     PD  T++  I  HC       A  +F +M R  CA +++T N
Sbjct: 223 AMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYN 282

Query: 547 SLISCLLKGGMPNEAF 562
            +IS L + G   EAF
Sbjct: 283 VMISGLCRSGAVEEAF 298


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 217/445 (48%), Gaps = 29/445 (6%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +   +N    T+NL+++SLCE    D  + +FD M   G  PN   +   V    RAG+ 
Sbjct: 143 IQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRT 202

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A   +     G V  +  +YN+L+++  KQ+  DEA  + +        PD  TFN  
Sbjct: 203 KQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSR 260

Query: 268 IQGLSRIGEVKKAFEFFYDM---GSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           I  L R G+V +A   F DM   G  G   P++VT+N ++ G C+   +     L++ +K
Sbjct: 261 ISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMK 320

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
               F   + +Y + + G  + GK+ +   + +EM   GI+P+  ++N+++DG  +   M
Sbjct: 321 KGGNFVS-LESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMM 379

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           + A  + + M+S G  PD VT+++L+ GYC  G++ +   + +EM  K   PN YT   L
Sbjct: 380 LDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTL 439

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           +N+L KE R ++A   L+++            N V++G C+ G +++A+ +V+EM     
Sbjct: 440 LNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGT 499

Query: 504 K----------------------PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
                                  PD +T+T LI G C  G++ EA   F +M+     PD
Sbjct: 500 NSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPD 559

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQ 566
            +T ++ +    K G  + A R+++
Sbjct: 560 SVTYDTFVLNFCKQGKISSALRVLK 584



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 200/409 (48%), Gaps = 29/409 (7%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM------------ST 226
           F  +R+  H P++P+        +R+         L Q RP  VT              T
Sbjct: 102 FKSLRT--HFPSTPLPLQLYHLLLRSS--------LQQNRPHYVTSLYTDMIQTGVNPET 151

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           + +N L+ +L + N  D A  +F +      QP+ +T  IL++G  R G  K+A EF   
Sbjct: 152 YTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVD- 210

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
            G  G + + V YNTL+S  C+ +      +L++ +  K    PDVVT+ S IS  C+ G
Sbjct: 211 -GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKG-LLPDVVTFNSRISALCRAG 268

Query: 347 KMDKATGIYNEMNSCGI----KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           K+ +A+ I+ +M   G     KP+ VTFN+++ GF + G M  A  + E M   G    +
Sbjct: 269 KVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSL 328

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
            ++++ + G  RNG+L +G  + DEM    + PN+Y++ I+++ LC+ + + DARR +  
Sbjct: 329 ESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDL 388

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +  N + P    Y  ++ G+C  G V EA  I+ EM  K C P+  T   L+     +GR
Sbjct: 389 MVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGR 448

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             EA  +  KM       D +T N +++ L + G   +A  ++     D
Sbjct: 449 KSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTD 497



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 192/426 (45%), Gaps = 58/426 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+VM  LC   +    + + D M S+G  P++      +      GK   AK +L++ 
Sbjct: 365 SYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEM 424

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T+  N+LLN+L K+    EA  M ++      Q DT T NI++ GL R GE+
Sbjct: 425 IRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGEL 484

Query: 278 KKAFEFFYDMGSFGCS----------------------PDIVTYNTLISGLCRVNEVARG 315
           +KA E   +M + G +                      PD++TY TLI+GLC+V ++   
Sbjct: 485 EKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEA 544

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            +   E+  K+   PD VTY + +  +CK GK+  A  +  +M   G   +  T+N LI 
Sbjct: 545 KKKFIEMMAKN-LHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLIL 603

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL-S 434
           G G  G +     + + M   G  PD+ T++++I+  C  G+      L  EM  K + S
Sbjct: 604 GLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVS 663

Query: 435 PNVYTFTILINALCKEN----------------------------------RLNDARRFL 460
           PNV +F ILI A CK                                    +L+DA+   
Sbjct: 664 PNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELF 723

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           +      L+ K FMY  +ID  CK G +D+A+ ++ ++ +K    D  +F  +I G   +
Sbjct: 724 EASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKR 783

Query: 521 GRMVEA 526
           G   +A
Sbjct: 784 GNKQQA 789



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 126/328 (38%), Gaps = 66/328 (20%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDG----------------------HLPNSPMIE 195
           T N+V+  LC  G  +    V   M +DG                      ++P+     
Sbjct: 470 TCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYT 529

Query: 196 FFVSSCIRAGKCDAAKG-----LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             ++   + GK + AK      +     P  VT  TF+ N       KQ     A+ + K
Sbjct: 530 TLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLN-----FCKQGKISSALRVLK 584

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           +  R        T+N LI GL   G++ + +    +M   G  PDI TYN +I+ LC   
Sbjct: 585 DMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGG 644

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN-EMNSCGIKPS--A 367
           +      LL E+  K   SP+V ++  +I  +CK G    A  +++  ++ CG K +  +
Sbjct: 645 KTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYS 704

Query: 368 VTFNVL-------------------------------IDGFGKVGNMVSAEYMRERMLSF 396
           + FN L                               ID   K G +  A  + ++++  
Sbjct: 705 LMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDK 764

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           GY  D  +F  +IDG  + G   Q  +L
Sbjct: 765 GYCFDHSSFIPVIDGLSKRGNKQQADEL 792



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 2/154 (1%)

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  +M    ++P  YTF +LI +LC+ N L+ AR    ++      P  F    ++ GFC
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           +AG   +A   V    +     ++V +  L+   C +    EA  +  +M   G  PD +
Sbjct: 198 RAGRTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           T NS IS L + G   EA RI +    D  L LP
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLP 289


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 193/370 (52%), Gaps = 7/370 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMR---SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           Y  VM  LC+ G     Q  FD +R        PN+ +    + +  + G  D A  LL+
Sbjct: 181 YGTVMNGLCKKG---HTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLN 237

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + +   +    F Y++L++AL K +  +    +F E   L   P+  TFN +I GL + G
Sbjct: 238 EMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEG 297

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +V+ A E    M   G  PD++TYN +I G     +V R  E+   +  KS   P++++Y
Sbjct: 298 KVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKS-IEPNIISY 356

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I+GY +  K+D+A  +  E++  G+KPS VT NVL+ G  ++G   SA+   + MLS
Sbjct: 357 NILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLS 416

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G++PD+ T  +L+ GY +NG + + +    +++ +    N+  +T +I+ LCK  +L+ 
Sbjct: 417 AGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDK 476

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    ++L    L P    Y  +I G+C+ G +DEA  ++ +ME+  C  D  T+ +++ 
Sbjct: 477 AHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVR 536

Query: 516 GHCMKGRMVE 525
           G     ++ E
Sbjct: 537 GFLRSNKVSE 546



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 225/458 (49%), Gaps = 48/458 (10%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS----SCIRAGKCDAA 210
           S  +++ ++++L  M  + SV  +F     + H    P+ EF +S    SC    + D  
Sbjct: 71  SVVSFSKLLKALVHMKHYSSVVSLF----REIHKLRIPVHEFILSIVVNSCCLMHRTDLG 126

Query: 211 KGLLS-QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL-YSQPDTWTFNILI 268
             +L+  F+ G +  +  ++N+LL  L  +N   +AV++FK+  R    +P+   +  ++
Sbjct: 127 FSVLAIHFKKG-IPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVM 185

Query: 269 QGLSRIGEVKKAFEFFY-----------------------------------DMGSFGCS 293
            GL + G  +KAF+                                      +M      
Sbjct: 186 NGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIP 245

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           PDI TY+TLI  LC++++      L  E+       P+V T+ SVI G CK GK++ A  
Sbjct: 246 PDIFTYSTLIDALCKLSQWENVRTLFLEM-IHLNIYPNVCTFNSVIDGLCKEGKVEDAEE 304

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           I   M   G+ P  +T+N++IDG+G  G +  A  + + M++    P++++++ LI+GY 
Sbjct: 305 IMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYA 364

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           R  ++++ +++C E+  K L P++ T  +L++ L +  R   A+ F  ++     +P  +
Sbjct: 365 RQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLY 424

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            +  ++ G+ K G V+EA     ++E +R   +   +T +I G C  G++ +A + F K+
Sbjct: 425 THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKL 484

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             IG  PD IT  ++IS   + G+ +EA + M R  ED
Sbjct: 485 PLIGLHPDVITYTAMISGYCQEGLLDEA-KDMLRKMED 521



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 183/420 (43%), Gaps = 39/420 (9%)

Query: 196 FFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           F VS+     KC D A  L  Q    +   S   ++ LL ALV   +    V +F+E  +
Sbjct: 41  FGVSNEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHK 100

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           L      +  +I++     +      F         G   + V +NTL+ GL   N+V  
Sbjct: 101 LRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKD 160

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              L K++  ++   P+ V Y +V++G CK G   KA  +   M     KP+   ++++I
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVI 220

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           D F K G +  A  +   M      PD+ T+S+LID  C+  Q      L  EM   N+ 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PNV TF  +I+ LCKE ++ DA   ++ +    + P    YN +IDG+   G VD A  I
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI------------------------- 529
              M  K  +P+ +++ ILI G+  + ++ EA+ +                         
Sbjct: 341 FDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400

Query: 530 ----------FNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQL 576
                     F++ML  G  PD  T  +L+    K G+  EA   F  ++R  ED N+Q+
Sbjct: 401 LGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 152/312 (48%), Gaps = 3/312 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FLE   +N+  N    T+N V+  LC+ G  +  + +  YM   G  P+       +   
Sbjct: 271 FLEMIHLNIYPN--VCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G+ D A+ +        +  +   YN L+N   +Q   DEA+ + +E  +   +P  
Sbjct: 329 GLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSI 388

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T N+L+ GL  +G  K A  FF +M S G  PD+ T+ TL+ G  +   V        +
Sbjct: 389 VTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHK 448

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ + E   ++  YT+VI G CK GK+DKA   + ++   G+ P  +T+  +I G+ + G
Sbjct: 449 LERRRE-DTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEG 507

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ M  +M   G L D  T++ ++ G+ R+ ++++     +E+ GK+ S    T  
Sbjct: 508 LLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVE 567

Query: 442 ILINALCKENRL 453
           +L++ + ++  L
Sbjct: 568 LLMDIIAEDPSL 579


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 213/428 (49%), Gaps = 23/428 (5%)

Query: 156 FKTYNLVMRSLCEM------GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+ + S+C         L D  + ++  M +   + N   +  F       GK D 
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  L+ +         T  Y+ ++  L      ++A  +F+E   +   PD +T+ ILI 
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A   F +M S GCSP +VTY  LI    +  +V + +++   +   +   
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM-VDAGCR 390

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+ VTY +++ G CK G + KA  +Y ++                +   + P+ VT+  L
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 450

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +DG  K   +  A  + + MLS G  P+ + + +LIDG+C+ G+++   ++  +M     
Sbjct: 451 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+V+T+T LI+ + K+ RL+ A + L Q+  +   P    Y  +IDG C+ G  ++A  
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALK 570

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +++ MEEK C P+ VT+T LI G    G++  ++ +F +M R GC+P+ +T   LI+ L 
Sbjct: 571 LLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLC 630

Query: 554 KGGMPNEA 561
             G+ ++A
Sbjct: 631 AAGLLDKA 638



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 193/385 (50%), Gaps = 15/385 (3%)

Query: 164 RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           R LC +G  D    +   M   G +P++      ++    A K + A  L  + +   VT
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
              + Y  L+++  K    ++A ++F+E   +   P   T+  LI    +  +V +A + 
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE---------------F 328
           F+ M   GC P+ VTY  L+ GLC+   +++  E+  ++   S+                
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P+VVTY +++ G CK  K+D A  + + M S G +P+ + ++ LIDGF K G + SA+ 
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M   GYLP V T++SLID   ++G+L+  +K+  +M   + +PNV T+T +I+ LC
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +      A + L  ++     P    Y  +IDG  KAG +D +  +  +M  K C P+ V
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620

Query: 509 TFTILIIGHCMKGRMVEAISIFNKM 533
           T+ +LI   C  G + +A  +  +M
Sbjct: 621 TYRVLINHLCAAGLLDKARLLLGEM 645



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 202/429 (47%), Gaps = 19/429 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC     +   ++F  M+  G  P+       + S  +AG  + A+ L  + 
Sbjct: 290 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 349

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R    + +   Y +L++A +K     +A  +F        +P+  T+  L+ GL + G +
Sbjct: 350 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 409

Query: 278 KKAFEFFYDM-GS---------FGC------SPDIVTYNTLISGLCRVNEVARGHELLKE 321
            KAFE +  + G+         F C      +P++VTY  L+ GLC+ ++V   HELL +
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL-D 468

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
               S   P+ + Y ++I G+CK GK+D A  ++ +M  CG  PS  T+  LID   K G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +  +ML     P+VVT++++IDG CR G+  + LKL   M+ K  SPNV T+T
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ L K  +++ +     Q+      P    Y  +I+  C AG +D+A +++ EM++ 
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                   +   I G       + ++ I  +M   G  P       LI C  K G    A
Sbjct: 649 YWPKYLQGYRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 562 FRIMQRASE 570
             + +   E
Sbjct: 707 MELHKEMME 715



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 178/439 (40%), Gaps = 58/439 (13%)

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++ +    +S  + A   D A   L + R      +   Y +LL+  +K+        + 
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---- 305
                    P+   FN L+       +   A++    M + GC P  V YN  I      
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 225

Query: 306 -------------------------------------LCRVNEVARGHELLKEVKFKSEF 328
                                                LC V +  +  +L+KE+  K  F
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG-F 284

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD  TY+ VI+  C   K++KA  ++ EM   G+ P   T+ +LID F K G +  A++
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 344

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E M S G  P VVT+++LI  Y +  Q+ Q   +   M      PN  T+  L++ LC
Sbjct: 345 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 404

Query: 449 KENRLNDARRFLKQL----------------KWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           K   ++ A     +L                  + L P    Y  ++DG CKA  VD A+
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++  M    C+P+ + +  LI G C  G++  A  +F +M + G  P   T  SLI  +
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 524

Query: 553 LKGGMPNEAFRIMQRASED 571
            K G  + A +++ +  +D
Sbjct: 525 FKDGRLDLAMKVLSQMLKD 543



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 186/427 (43%), Gaps = 21/427 (4%)

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +R  C     DS   + D+    G+ P+       V     AG+ D    +  +      
Sbjct: 16  LRRTCSHAAGDSEDPLKDF----GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGF 71

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
            M  F      +AL K+    +A+ M  +E F+L    DT     +I GL       +A 
Sbjct: 72  CMDRFTVGCFAHALCKEGRWADALDMIEREDFKL----DTVLCTHMISGLMEASYFDEAM 127

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
            F + M    C P++VTY TL+SG  +  ++     ++  +      +P+   + S++  
Sbjct: 128 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIIN-MMMTEGCNPNPSLFNSLVHS 186

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS------AEYMRERMLS 395
           YC       A  + N M +CG  P  V +N+ I        + S      AE +   ML+
Sbjct: 187 YCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLA 246

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
              + + V  ++     C  G+ ++  +L  EM  K   P+  T++ +I  LC   ++  
Sbjct: 247 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 306

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    +++K   + P  + Y  +ID FCKAG +++A  +  EM    C P  VT+T LI 
Sbjct: 307 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 366

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA-----SE 570
            +    ++ +A  IF++M+  GC P+D+T  +L+  L K G  ++AF +  +      S 
Sbjct: 367 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 426

Query: 571 DQNLQLP 577
           D +   P
Sbjct: 427 DSDFYFP 433



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 192/482 (39%), Gaps = 102/482 (21%)

Query: 142 FLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           FL F  + +  +     TY +++ S C+ GL +  Q +F+ MRS G  P        + +
Sbjct: 308 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 367

Query: 201 CIRAGKCDAAKGLLSQF-----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE---- 251
            ++A +   A  +  +      RP +VT     Y +L++ L K  N  +A  ++ +    
Sbjct: 368 YLKAKQVPQANDIFHRMVDAGCRPNDVT-----YGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 252 --------YF----RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
                   YF    R    P+  T+  L+ GL +  +V  A E    M S GC P+ + Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 300 NTLISGLCRVNEVARGHELLKEVK----------------------------------FK 325
           + LI G C+  ++    E+  ++                                    K
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              +P+VVTYT++I G C++G+ +KA  + + M   G  P+ VT+  LIDG GK G +  
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 602

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG------------------------ 421
           +  +  +M   G  P+ VT+  LI+  C  G L++                         
Sbjct: 603 SLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQ 662

Query: 422 ---------LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
                    L + +EM+     P    + +LI+   K  RL  A    K++     VP  
Sbjct: 663 GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSS 719

Query: 473 F-----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
                 MY  +I   C A  V+EA  + +EM  +   P+   F  LI G     +  EA+
Sbjct: 720 VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779

Query: 528 SI 529
            +
Sbjct: 780 QL 781



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 37/179 (20%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV------------------------ 177
           F + SR   S N  + TY +++  LC  GL D  ++                        
Sbjct: 607 FTQMSRKGCSPN--YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664

Query: 178 ---------VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR--PGEVTMST 226
                    + + M S G +P +P+    +    +AG+ + A  L  +    P  V    
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 724

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            MY SL+ AL   +  +EA  ++ E  R    P+   F  LI+GL  + +  +A +  Y
Sbjct: 725 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 203/408 (49%), Gaps = 9/408 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH----LPNSPMIEFFVSSCIRAGKCDAAKGL 213
           +YN +++ LC+    +  + +  +M  DG      P+       ++     G+ D A  L
Sbjct: 157 SYNTLLKGLCDRRRAEEARELL-HMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSL 215

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
              F    V+     YN++++ L K    D A  +F++      +P+  T+N +I GL +
Sbjct: 216 ---FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCK 272

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             EV  A   F  M   G  P  VTYNT+I GLC+   V R   + +++       PD V
Sbjct: 273 AQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM-IDRGVKPDHV 331

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++I G CK   +DKA G++ +M   G+KP  +T+ ++IDG  K  ++  AE + ++M
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM 391

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  P+  T++ LI GY   GQ  + ++   EM   +L P+V+T+ +L++ LCK  + 
Sbjct: 392 IDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKC 451

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           N+AR     +    + P   +Y  ++ G+ K G + E + ++  M      P+   F  +
Sbjct: 452 NEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTV 511

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           I  +  +  + E + IF KM + G +P+ +T  +LI  L K G  ++A
Sbjct: 512 ICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 208/442 (47%), Gaps = 34/442 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    D  + VF  M   G  PN+      +    +A + D A+G+  + 
Sbjct: 227 TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  S   YN++++ L K    D A  +F++      +PD  T+N +I GL +   +
Sbjct: 287 VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAI 346

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH--------------------- 316
            KA   F  M   G  PD +TY  +I GLC+   V R                       
Sbjct: 347 DKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCL 406

Query: 317 -----------ELLKEVKFKS--EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                      E+++ +K  S  +  PDV TY  ++   CK GK ++A  +++ M   GI
Sbjct: 407 IHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGI 466

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KPS   + +++ G+GK G +     +   M++ G  P+   F+++I  Y +   +++ + 
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMH 526

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +  +MK + LSPNV T+  LI+ALCK  R++DA     Q+    + P   ++N ++ G C
Sbjct: 527 IFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLC 586

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
                ++   +  EM  +  +PD V F  ++   C +GR++EA  + + M+ +G  PD I
Sbjct: 587 TVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVI 646

Query: 544 TVNSLISCLLKGGMPNEAFRIM 565
           + N+LI         +EA +++
Sbjct: 647 SYNTLIDGHCFASRMDEAVKLL 668



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 193/392 (49%), Gaps = 4/392 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+      G  D    +F  M   G  P+       +    +A + D A+ +  Q 
Sbjct: 195 SYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQM 251

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN++++ L K    D A  +F++      +P   T+N +I GL +   V
Sbjct: 252 VEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAV 311

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  PD VTYNT+I GLC+   + +   + +++  K    PD +TYT 
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG-VKPDNLTYTI 370

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK   +D+A G++ +M   G+KP+  T+N LI G+   G         + M +  
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV T+  L+D  C+NG+ N+   L D M  K + P+V  + I+++   K+  L++  
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  +  N + P   ++N VI  + K   +DE   I  +M+++   P+ VT+  LI   
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C  GR+ +A+  FN+M+  G  P+++  NSL+
Sbjct: 551 CKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 196/404 (48%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    D  + VF  M   G  P++      +    +A   D A+G+  Q 
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM 391

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN L++  +     +E V   KE      +PD +T+ +L+  L + G+ 
Sbjct: 392 IDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKC 451

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  P +  Y  ++ G  +   ++  H+LL  +   +  SP+   + +
Sbjct: 452 NEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLN-LMVANGISPNHRIFNT 510

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI  Y K   +D+   I+ +M   G+ P+ VT+  LID   K+G +  A     +M++ G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V F+SL+ G C   +  +  +L  EM  + + P++  F  ++  LCKE R+ +AR
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEAR 630

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R +  +    L P    YN +IDG C A  +DEA  ++  M     KP+ V++  L+ G+
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGY 690

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C  GR+  A  +F +MLR G  P   T N++++ L + G  +EA
Sbjct: 691 CKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEA 734



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 206/450 (45%), Gaps = 51/450 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD------AAK 211
           TY++V+   C +G  +     F  +     L     ++  V + +  G CD      A  
Sbjct: 86  TYSIVIGCFCRIGRLELGFAAFGLI-----LKTGWRVDDIVVNQLLKGLCDTKRVGEAMH 140

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA---VYMFKEYFRLYSQPDTWTFNILI 268
            LL Q       +    YN+LL  L  +  A+EA   ++M  +       PD  ++NI+I
Sbjct: 141 VLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVI 200

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-- 326
            G    G+V KA+  F +MG    SPD+VTYNT+I GLC+  EV R  ++ +++  K   
Sbjct: 201 NGFFNEGQVDKAYSLFLEMG---VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVK 257

Query: 327 --------------------------------EFSPDVVTYTSVISGYCKLGKMDKATGI 354
                                              P  VTY ++I G CK   +D+A G+
Sbjct: 258 PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGV 317

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           + +M   G+KP  VT+N +IDG  K   +  AE + ++M+  G  PD +T++ +IDG C+
Sbjct: 318 FQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
              +++   +  +M  K + PN  T+  LI+      +  +  + +K++  +DL P  F 
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y  ++D  CK G  +EA  +   M  K  KP    + I++ G+  KG + E   + N M+
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             G +P+    N++I    K  M +E   I
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHI 527



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 201/413 (48%), Gaps = 14/413 (3%)

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR------PGEV 222
           +GLHD++++ FD +       +   +   +S   RA    ++K  +S+F         +V
Sbjct: 22  LGLHDALKL-FDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKV 80

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
                 Y+ ++    +    +     F    +   + D    N L++GL     V +A  
Sbjct: 81  APDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMH 140

Query: 283 -FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--KFKSEFSPDVVTYTSVI 339
                M   GC   +V+YNTL+ GLC         ELL  +     S  SPDVV+Y  VI
Sbjct: 141 VLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVI 200

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +G+   G++DKA  ++ EM   G+ P  VT+N +IDG  K   +  AE + ++M+  G  
Sbjct: 201 NGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVK 257

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+ VT++++IDG C+  +++    +  +M  K + P+  T+  +I+ LCK   ++ A   
Sbjct: 258 PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGV 317

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            +Q+    + P    YN +IDG CKA  +D+A  +  +M +K  KPD +T+TI+I G C 
Sbjct: 318 FQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF-RIMQRASED 571
              +  A  +F +M+  G  P++ T N LI   L  G   E   RI + ++ D
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 208/419 (49%), Gaps = 4/419 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY L++  LC+ G  +  + +FD M   G  P+  +    +    + G       LL+  
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +  ++N+++ A  K+   DE +++F +  +    P+  T+  LI  L ++G V
Sbjct: 497 VANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRV 556

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  M + G +P+ V +N+L+ GLC V++  +  EL  E+       PD+V + +
Sbjct: 557 DDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM-LNQGIRPDIVFFNT 615

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+   CK G++ +A  + + M   G+KP  +++N LIDG      M  A  + + M+S G
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++V++++L+ GYC+ G+++    L  EM  K ++P V T+  ++N L +  R ++AR
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAR 735

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  +  +     Y+ ++DGFCK    DEA  I   +     + D +TF I+I G 
Sbjct: 736 ELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL 795

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE---AFRIMQRASEDQN 573
              GR  +A+ +F  +   G  P  +T   +   L++ G   E    F +M+++    N
Sbjct: 796 FKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN 854



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 194/442 (43%), Gaps = 36/442 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++  LC+    D  + VF  M   G  PN+      +   +  G+ +     + + 
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE- 276
              ++    F Y  LL+ L K    +EA  +F    R   +P    + I++ G  + G  
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486

Query: 277 ----------------------------------VKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                             + +    F  M   G SP++VTY TL
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I  LC++  V        ++      +P+ V + S++ G C + K +K   ++ EM + G
Sbjct: 547 IDALCKLGRVDDAVLQFNQM-INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG 605

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I+P  V FN ++    K G ++ A  + + M+  G  PDV+++++LIDG+C   ++++ +
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL D M    L PN+ ++  L++  CK  R+++A    +++    + P    YN +++G 
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL 725

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            ++G   EA  +   M + R      T++I++ G C      EA  IF  +  +    D 
Sbjct: 726 FRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDI 785

Query: 543 ITVNSLISCLLKGGMPNEAFRI 564
           IT N +I  L KGG   +A  +
Sbjct: 786 ITFNIMIDGLFKGGRKEDAMDL 807



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 204/414 (49%), Gaps = 2/414 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S +   +  S   Y +++    + G    +  + + M ++G  PN  +    + +  +  
Sbjct: 460 SMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRA 519

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             D    +  + +   ++ +   Y +L++AL K    D+AV  F +       P+   FN
Sbjct: 520 MIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFN 579

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            L+ GL  + + +K  E F +M + G  PDIV +NT++  LC+   V     L+  +   
Sbjct: 580 SLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCM 639

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PDV++Y ++I G+C   +MD+A  + + M S G+KP+ V++N L+ G+ K G + +
Sbjct: 640 G-LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDN 698

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   ML  G  P V T++++++G  R+G+ ++  +L   M       ++ T++I+++
Sbjct: 699 AYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILD 758

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             CK N  ++A +  + L   DL      +N +IDG  K G  ++A  + A +      P
Sbjct: 759 GFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVP 818

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL-KGGMP 558
             VT+ ++      +G + E   +F+ M + G AP+   +N+LI  LL +G +P
Sbjct: 819 SVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 190/401 (47%), Gaps = 3/401 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +S NH  + +N V+ +  +  + D V  +F  M+  G  PN       + +  + G+ D 
Sbjct: 501 ISPNH--RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A    +Q     VT +  ++NSL+  L   +  ++   +F E      +PD   FN ++ 
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLC 618

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L + G V +A      M   G  PD+++YNTLI G C  + +    +LL  +   +   
Sbjct: 619 NLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGM-VSAGLK 677

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P++V+Y +++ GYCK G++D A  ++ EM   G+ P   T+N +++G  + G    A  +
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+    L  + T+S ++DG+C+N   ++  K+   +   +L  ++ TF I+I+ L K
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R  DA      +  N LVP    Y  + +   + G+++E + + + ME+    P+   
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHM 857

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              LI     +G +  A +  +K+     + +  T + LIS
Sbjct: 858 LNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLIS 898



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 140/324 (43%), Gaps = 3/324 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FLE   +N  +      +N V+ +LC+ G     + + D M   G  P+       +   
Sbjct: 598 FLEM--LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
             A + D A  LL       +  +   YN+LL+   K    D A  +F+E  R    P  
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+N ++ GL R G   +A E + +M        I TY+ ++ G C+ N      ++ + 
Sbjct: 716 ETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQS 775

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +    +   D++T+  +I G  K G+ + A  ++  + + G+ PS VT+ ++ +   + G
Sbjct: 776 L-CSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEG 834

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           ++   + +   M   G  P+    ++LI      G++ +      ++  KN S    T +
Sbjct: 835 SLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTS 894

Query: 442 ILINALCKENRLNDARRFLKQLKW 465
           +LI+   +E     A+   ++ ++
Sbjct: 895 MLISLFSREEYQQHAKSLPEKCRF 918


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 202/405 (49%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +T N +++   EMGL +  +++F+ M   G  P+S      V    + G    A   LS 
Sbjct: 171 RTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSV 230

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                  +    +  +++    +     A++ F+    +  +P+   F  +I+GL + G 
Sbjct: 231 MLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGS 290

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K+AFE   +M   G  P++ T+ +LI GLC+     +   L  ++       P+V+TYT
Sbjct: 291 IKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 350

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++ISGYC+  K+++A  + + M   G+ P+  T+  LIDG  K GN   A  +   M S 
Sbjct: 351 AMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSE 410

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+ P++ T++++++G C+ G++ +  K+ ++     L P+ +T+ IL++  CK+  +  A
Sbjct: 411 GFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQA 470

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                ++    + P    Y  +I  FC+   + E+ +   E       P   T+T +I G
Sbjct: 471 LALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICG 530

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +C +G +  A+  F+++   GCAPD IT  ++IS L K    +EA
Sbjct: 531 YCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEA 575



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 203/411 (49%), Gaps = 4/411 (0%)

Query: 162 VMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           ++ S  E+G L ++V++V + M + G +PN+  + + +      G  + A+ L  +    
Sbjct: 141 MVESFSEVGRLKEAVEMVIE-MHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR 199

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
            V   +  Y  ++    K  N  EA              D  TF ++I   S  G   +A
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
             +F  +   G  P+++ +  +I GLC+   + +  E+L+E+  K  + P+V T+TS+I 
Sbjct: 260 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKG-WKPNVYTHTSLID 318

Query: 341 GYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           G CK G  +KA  ++ ++  S   KP+ +T+  +I G+ +   +  AE +  RM   G +
Sbjct: 319 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLV 378

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+  T+++LIDG+C+ G   +   L + M  +  SPN+ T+  ++N LCK  R+ +A + 
Sbjct: 379 PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKM 438

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L+    N L P  F YN ++   CK  N+ +A  +  +M +   +PD  ++T LI   C 
Sbjct: 439 LEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCR 498

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + RM E+   F + +RIG  P + T  S+I    + G    A +   R S+
Sbjct: 499 ENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSD 549



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 163/362 (45%), Gaps = 2/362 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ L++      G        F  +   G  PN       +    + G    A  +L + 
Sbjct: 242 TFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEM 301

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
                  + + + SL++ L K+   ++A  +F +  R  + +P+  T+  +I G  R  +
Sbjct: 302 VGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDK 361

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A      M   G  P+  TY TLI G C+     R ++L+  +  +  FSP++ TY 
Sbjct: 362 LNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEG-FSPNLCTYN 420

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++++G CK G++ +A  +  +    G+KP   T+N+L+    K  N+  A  +  +ML  
Sbjct: 421 AIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKI 480

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD+ ++++LI  +CR  ++ +     +E     + P   T+T +I   C+E  L  A
Sbjct: 481 GIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLA 540

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +F  +L  +   P    Y  +I G CK    DEA  +   M EK   P +VT   L   
Sbjct: 541 MKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYE 600

Query: 517 HC 518
           +C
Sbjct: 601 YC 602



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 2/293 (0%)

Query: 158 TYNLVMRSLCEMGLHD-SVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+  ++  LC+ G  + + ++    +RS+ H PN       +S   R  K + A+ LLS+
Sbjct: 312 THTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSR 371

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +  +T  Y +L++   K  N + A  +          P+  T+N ++ GL + G 
Sbjct: 372 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR 431

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V++A++   D    G  PD  TYN L+S  C+   + +   L  ++  K    PD+ +YT
Sbjct: 432 VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM-LKIGIQPDIHSYT 490

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I+ +C+  +M ++   + E    GI P+  T+  +I G+ + GN+  A     R+   
Sbjct: 491 TLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDH 550

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           G  PD +T+ ++I G C+  + ++   L D M  K L P   T   L    CK
Sbjct: 551 GCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 146/336 (43%), Gaps = 49/336 (14%)

Query: 249 FKEYFRLY------------SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
           F+ + RLY            S+        +++  S +G +K+A E   +M + G  P+ 
Sbjct: 111 FRHFMRLYIVCAMSLIGNRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNT 170

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            T N +I                   K  SE                 +G ++ A  ++ 
Sbjct: 171 RTLNWII-------------------KVTSE-----------------MGLVEYAELLFE 194

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EM   G++P ++++ V++  + K+GN++ A+     ML  G++ D  TF+ +I  +   G
Sbjct: 195 EMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKG 254

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
              + L     +    L PN+  FT +I  LCK   +  A   L+++      P  + + 
Sbjct: 255 YTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHT 314

Query: 477 PVIDGFCKAGNVDEA-NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
            +IDG CK G  ++A  + +  +  +  KP+ +T+T +I G+C + ++  A  + ++M  
Sbjct: 315 SLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G  P+  T  +LI    K G    A+ +M   S +
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSE 410



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 90/201 (44%)

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           +++ F +VG +  A  M   M + G +P+  T + +I      G +     L +EM  + 
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           + P+  ++ +++   CK   + +A ++L  +     V     +  +I  F   G    A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                + +   +P+ + FT +I G C +G + +A  +  +M+  G  P+  T  SLI  L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 553 LKGGMPNEAFRIMQRASEDQN 573
            K G   +AFR+  +    +N
Sbjct: 321 CKKGWTEKAFRLFLKLVRSEN 341


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 205/403 (50%), Gaps = 9/403 (2%)

Query: 139 GLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           G+ FL FS +   L   ++    T+  +++ +C  G      +  D++ + G   +    
Sbjct: 60  GITFL-FSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSY 118

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G+  AA  +L   R   V     MY++++++L K     +A  ++ E   
Sbjct: 119 AILMNGLCKMGETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIA 175

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               P+ +TF+IL+  L +  + K+A      M   G  P++VTY  ++ G C VN+V +
Sbjct: 176 KGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNK 235

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              +   V  +    P+V  Y  +I+G CK  ++D+A  ++ EM+   I P  VT+N+LI
Sbjct: 236 ALNIF-NVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILI 294

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           DG  K+G + ++  + + M S G   D++T++SL+   C+N  L+Q + L  E+K + + 
Sbjct: 295 DGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PNV T+T LI+ LCK+ RL DA    +++         + YN +I+G CK G  DEA  +
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++ ME+  C PD V++  +I     KG  V+   +   M+  G
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRG 457



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 202/420 (48%), Gaps = 41/420 (9%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P+++F   ++S ++      A  L  Q     +  S      L+N            
Sbjct: 6   PTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLF 65

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  ++  +P++ TF  LI+G+   G+  +A  F   + + G   D V+Y  L++GL
Sbjct: 66  SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGL 125

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C++ E     ++L+    K+  + DVV Y+++I   CK   +  A  +Y+EM + GI P+
Sbjct: 126 CKMGETRAAMQMLR----KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPN 181

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             TF++L+D   K      A  +   M+  G  P+VVT+ +++DGYC   Q+N+ L + +
Sbjct: 182 VYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFN 241

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M  + + PNV+ + I+IN LCK+ R+++A    K++ W  + P    YN +IDG CK G
Sbjct: 242 VMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLG 301

Query: 487 NV-----------------------------------DEANVIVAEMEEKRCKPDKVTFT 511
            +                                   D+A  +V E++++  +P+  T+T
Sbjct: 302 KISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYT 361

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI G C  GR+ +A  IF ++L  G      T N +I+ L K G+ +EA  ++ R  ++
Sbjct: 362 TLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDN 421



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 196/402 (48%), Gaps = 4/402 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T  ++M   C  G    +  +   +   G+ PNS      +      G+   A    
Sbjct: 44  SIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFH 103

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                    +    Y  L+N L K      A+ M +   + +   D   ++ +I  L + 
Sbjct: 104 DHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKG 160

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             V  A+  + +M + G  P++ T++ L+  LC+  +  +   LL  +  K    P+VVT
Sbjct: 161 KFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLL-AMMMKKGVKPNVVT 219

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +++ GYC + +++KA  I+N M   G++P+   +N++I+G  K   +  A  + + M 
Sbjct: 220 YGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMH 279

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                PDVVT++ LIDG C+ G+++  L+L DEM+    + ++ T+  L++ALCK + L+
Sbjct: 280 WKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLD 339

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   +K++K   + P    Y  +IDG CK G +++A VI  E+  +       T+ ++I
Sbjct: 340 QAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMI 399

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            G C KG   EA+++ ++M    C PD ++  ++I  L + G
Sbjct: 400 NGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 5/349 (1%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
             +N +L +LVK N+   A+ +F++      +P   T  IL+      G +   F     
Sbjct: 11  LQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTK 70

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           +   G  P+ +T+ TLI G+C +N  A    L  +      F  D V+Y  +++G CK+G
Sbjct: 71  ILKMGYEPNSITFTTLIKGMC-LNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           +   A  +   +    +    V ++ +ID   K   +  A  +   M++ G  P+V TFS
Sbjct: 130 ETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            L+D  C++ +  Q + L   M  K + PNV T+  +++  C  N++N A      +   
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            + P  + YN +I+G CK   VDEA  +  EM  K+  PD VT+ ILI G C  G++  +
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTS 306

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           + + ++M  IG   D IT NSL+  L K    ++A  +++   +DQ +Q
Sbjct: 307 LELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI-KDQGIQ 354



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 146/318 (45%), Gaps = 36/318 (11%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N     Y+ ++ SLC+         ++  M + G  PN       V +  +  K   A 
Sbjct: 143 VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAM 202

Query: 212 GLLSQF-----RPGEVTMSTFM------------------------------YNSLLNAL 236
            LL+       +P  VT    M                              YN ++N L
Sbjct: 203 NLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGL 262

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K+   DEA+ +FKE       PD  T+NILI GL ++G++  + E   +M S G + DI
Sbjct: 263 CKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDI 322

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           +TYN+L+  LC+ + + +   L+KE+K +    P+V TYT++I G CK G+++ A  I+ 
Sbjct: 323 ITYNSLLHALCKNHHLDQAITLVKEIKDQG-IQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           E+ + G   +  T+NV+I+G  K G    A  +  RM     +PD V++ ++I      G
Sbjct: 382 EILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441

Query: 417 QLNQGLKLCDEMKGKNLS 434
           +  +  KL   M  + LS
Sbjct: 442 ETVKTNKLLCAMIVRGLS 459



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 3/172 (1%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML     P ++ F+ ++    +       + L  +++   + P++ T TIL+N  C    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +      L ++      P    +  +I G C  G   EA +    +     K D+V++ I
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           L+ G C  G    A+ +  K        D +  +++I  L KG    +A+R+
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTW---VNADVVMYSTIIDSLCKGKFVTDAYRL 169


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 178/327 (54%), Gaps = 1/327 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N L++ L K++  +EA  +F E  +   +P   +FN LI G  + G + + F     M 
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                PD+ TY+ LI+GLC+  ++   ++L  E+  +    P+ VT+T++I+G+C  G+ 
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG-LVPNDVTFTTLINGHCVTGRA 346

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D    IY +M   G+KP  +T+N LI+G  KVG++  A+ +   M   G  PD  T++ L
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG C+ G L   L++  EM  + +  +   FT LI+  C+E ++ +A R L+++    +
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  VI GFCK G+V     ++ EM+     P  VT+ +L+ G C +G+M  A  
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANM 526

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKG 555
           + + ML +G  PDDIT N L+   L+ 
Sbjct: 527 LLDAMLNLGVVPDDITYNILLERTLQA 553



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 173/330 (52%), Gaps = 1/330 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L + L+K N    A   ++E       PD   FN+L+  L +  ++ +A   F ++G  G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P +V++NTLI+G C+   + +G  L K    ++   PDV TY+ +I+G CK G++D A
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRL-KRFMMENRVFPDVFTYSVLINGLCKEGQLDDA 314

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++ EM   G+ P+ VTF  LI+G    G       + ++ML  G  PDV+T+++LI+G
Sbjct: 315 NKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G L +  KL  EM  + L P+ +T+T+LI+  CKE  L  A    K++    +   
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +  +I GFC+ G V EA   + EM E   KPD  T+T++I G C KG +     +  
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +M   G  P  +T N L++ L K G    A
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNA 524



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 205/425 (48%), Gaps = 15/425 (3%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           LS  H F+   L + S C M        +    +S        +++F VS   R GK  A
Sbjct: 93  LSTQHHFR---LSIHSYCTMTHFLCTHKMLSEAQS--------LLQFVVS---RKGKNSA 138

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           +    S         S  +++ L+NA        +A+  F+   +   Q    +   L  
Sbjct: 139 SSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFD 198

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L ++     A+ F+ ++   G  PD+  +N L+  LC+ +++     L  E+  K    
Sbjct: 199 RLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG-KRGLR 257

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P VV++ ++I+GYCK G +D+   +   M    + P   T++VLI+G  K G +  A  +
Sbjct: 258 PTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL 317

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G +P+ VTF++LI+G+C  G+ + G+++  +M  K + P+V T+  LIN LCK
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L +A++ + ++    L P  F Y  +IDG CK G+++ A  I  EM ++  + D V 
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           FT LI G C +G+++EA     +ML  G  PDD T   +I    K G     F++++   
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497

Query: 570 EDQNL 574
            D ++
Sbjct: 498 CDGHV 502



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 186/364 (51%), Gaps = 1/364 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +L   F +   +   L ++ L       ++ +   G+ P+       +    +  K + A
Sbjct: 185 NLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEA 244

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + L  +     +  +   +N+L+N   K  N D+   + +        PD +T+++LI G
Sbjct: 245 QLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLING 304

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G++  A + F +M   G  P+ VT+ TLI+G C       G E+ +++  +    P
Sbjct: 305 LCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM-LRKGVKP 363

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DV+TY ++I+G CK+G + +A  +  EM   G+KP   T+ +LIDG  K G++ SA  +R
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + M+  G   D V F++LI G+CR GQ+ +  +   EM    + P+  T+T++I+  CK+
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             +    + LK+++ +  VP    YN +++G CK G +  AN+++  M      PD +T+
Sbjct: 484 GDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITY 543

Query: 511 TILI 514
            IL+
Sbjct: 544 NILL 547



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 155/322 (48%), Gaps = 1/322 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N++M  LC+    +  Q++F  +   G  P        ++   ++G  D    L     
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM 287

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V    F Y+ L+N L K+   D+A  +F E       P+  TF  LI G    G   
Sbjct: 288 ENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRAD 347

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              E +  M   G  PD++TYNTLI+GLC+V ++    +L+ E+  +    PD  TYT +
Sbjct: 348 LGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG-LKPDKFTYTML 406

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G ++ A  I  EM   GI+   V F  LI GF + G ++ AE     ML  G 
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T++ +I G+C+ G +  G KL  EM+     P V T+ +L+N LCK+ ++ +A  
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANM 526

Query: 459 FLKQLKWNDLVPKPFMYNPVID 480
            L  +    +VP    YN +++
Sbjct: 527 LLDAMLNLGVVPDDITYNILLE 548



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC+ G  D    +F  M   G +PN       ++     G+ D    +  Q 
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      YN+L+N L K  +  EA  +  E  +   +PD +T+ +LI G  + G++
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E   +M   G   D V +  LISG CR  +V      L+E+  ++   PD  TYT 
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM-LEAGIKPDDATYTM 475

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G+CK G +     +  EM   G  P  VT+NVL++G  K G M +A  + + ML+ G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 398 YLPDVVTFSSLID 410
            +PD +T++ L++
Sbjct: 536 VVPDDITYNILLE 548


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 210/415 (50%), Gaps = 3/415 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  + NL++ SL  +G H  V+  F  + + G  P++      V +C+ AG  D A  +L
Sbjct: 121 SLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAML 180

Query: 215 SQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            +     G      F YN ++  L +     +A+ +F E   +   P+  T+N +I G  
Sbjct: 181 RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHV 240

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G+++  F     M   G  P++VTYN L+SGLCR   +     L+ E+   S   PD 
Sbjct: 241 KGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSML-PDG 299

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY+ +  G  + G+      ++ E    G+   A T ++L++G  K G +  A+ + E 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ++  G +P  V +++LI+GYC+   L     + ++MK +++ P+  T+  LIN LCK   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A   + +++ + + P    +N +ID +  AG +++   ++++M++K  K D ++F  
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++   C  G++ EA++I + M+    AP+    NS+I   ++ G   +A  ++++
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK 534



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 199/399 (49%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  ++   + D M  DG  PN       +S   R G+ D  + L+ + 
Sbjct: 231 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEM 290

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F Y+ L + L +   +   + +F E  +       +T +IL+ GL + G+V
Sbjct: 291 ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA + F  +   G  P  V YNTLI+G C+V ++     + +++K +    PD +TY +
Sbjct: 351 AKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR-HIRPDHITYNA 409

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CKL  + KA  +  EM   G+ PS  TFN LID +G  G +     +   M   G
Sbjct: 410 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 469

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              DV++F S++  +C+NG++ + + + D+M  K+++PN   +  +I+A  +      A 
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAL 529

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++++K + +      YN ++ G C++  +DEA  ++  +  +  +PD V++  +I   
Sbjct: 530 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 589

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C KG   +A+ +  +M + G  P   T ++L+S L   G
Sbjct: 590 CNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 199/409 (48%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  L   G       VFD M   G  PN       +   ++ G  +A   L  Q 
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQM 255

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN LL+ L +    DE   +  E       PD +T++IL  GL+R GE 
Sbjct: 256 LHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGES 315

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +     F +    G      T + L++GLC+  +VA+  ++  E+   +   P  V Y +
Sbjct: 316 QTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVF-EMLVHTGLVPTTVIYNT 374

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC++  +  A  I+ +M S  I+P  +T+N LI+G  K+  +  AE +   M   G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y   GQL +   +  +M+ K +  +V +F  ++ A CK  ++ +A 
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  + + D+ P   +YN +ID + ++G+ ++A ++V +M+        VT+ +L+ G 
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGL 554

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C   ++ EA  +   +   G  PD ++ N++IS     G  ++A  ++Q
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 190/398 (47%), Gaps = 5/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  D  + + D M S   LP+            R G+      L ++ 
Sbjct: 266 TYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAES 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +  +  + LLN L K     +A  +F+        P T  +N LI G  ++ ++
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDL 385

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M S    PD +TYN LI+GLC++  V +  +L+ E++ KS   P V T+ +
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME-KSGVDPSVETFNT 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y   G+++K   + ++M   GIK   ++F  ++  F K G +  A  + + M+   
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 504

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+   ++S+ID Y  +G   Q L L ++MK   +S ++ T+ +L+  LC+ +++++A 
Sbjct: 505 VAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 564

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  L+   L P    YN +I   C  G+ D+A  ++ EM +   +P   T   L+   
Sbjct: 565 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSAL 624

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDD----ITVNSLISC 551
              GR+ +   ++ +ML     P      I V++ + C
Sbjct: 625 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 662



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 2/198 (1%)

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           C   PS  + N+L++    VG           +++ G  PD   ++ ++      G L+ 
Sbjct: 116 CSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDV 175

Query: 421 GLKLCDEMKGKNLS--PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            L +   M     +  P+ +++ ++I  L +  + +DA +   ++    + P    YN +
Sbjct: 176 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTM 235

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           IDG  K G+++    +  +M     KP+ VT+ +L+ G C  GRM E  ++ ++M     
Sbjct: 236 IDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSM 295

Query: 539 APDDITVNSLISCLLKGG 556
            PD  T + L   L + G
Sbjct: 296 LPDGFTYSILFDGLTRTG 313



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/169 (18%), Positives = 69/169 (40%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + YN ++ +  E G  +   ++ + M++ G   +       +    R+ + D A+ L+  
Sbjct: 510 QVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   +      YN++++A   + + D+A+ + +E  +   +P   T + L+  L+  G 
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGR 629

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           V      +  M      P    Y  ++    R    ++   L KE+  K
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 678



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/147 (19%), Positives = 60/147 (40%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  ++ S  TYNL+++ LC     D  + +   +R+ G  P+       +S+C   G  D
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL +     +  +    ++L++AL       +   ++++      +P +  + I++
Sbjct: 597 KALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPD 295
               R     K      +M   G + D
Sbjct: 657 DAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 209/415 (50%), Gaps = 6/415 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN+++  LC+ G    V  V++ M ++   P+       +    R+G  D A  + 
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     + +   MYNSL+    +     EA + F +        +  T+NI+I+GL   
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA-WKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 275 GEVKKAFEFFYDM--GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           G V +A E  +D+      C PD VT+ TLI GLC+     +   + +E +   +   DV
Sbjct: 382 GMVDEAIEL-WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK-QLDV 439

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            +Y+S+I+G C +G++  A  +Y +M+  G KP++  +N LI GF +V     A  +  +
Sbjct: 440 FSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSK 499

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  P V+T+++LIDG C+  +  +   +  EM     +P++ T+  LI  L  + +
Sbjct: 500 MADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKK 559

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFT 511
           ++DA    KQ+ +  L     M+N +I G C AG VDEA  + ++M+EK+ C P+ VT+ 
Sbjct: 560 IDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYN 619

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            L+ G    G + +A +++  +   G  PD I+ N+ I  L      +E  +++ 
Sbjct: 620 TLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 203/417 (48%), Gaps = 8/417 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN+V+RSLC  G  D    +FD +R     P+       +    +  + D A  LL
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLL 216

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSR 273
            +     V      YN+LL    K    ++ + ++ +  +   ++P+  T+N+++ GL +
Sbjct: 217 DEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G  K+  E +  M +    PD++TY  LI GLCR  +V     +  E+  K+    D  
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI-IKTGLVIDAA 335

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF---GKVGNMVSAEYMR 390
            Y S++ G+C+ G++ +A   ++     G++ +  T+N++I G    G V   +    + 
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E+      +PD VTF +LI G C+NG  N+   + +E +      +V++++ +IN LC  
Sbjct: 395 EK--DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV 452

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            RL DA +  +++  +   P   +YN +I GFC+     +A  I ++M +  C P  +T+
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             LI G C   +  EA S+  +M+  G  PD  T  SLI  L      ++A  I ++
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQ 569



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 175/378 (46%), Gaps = 35/378 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN +L +L  + + D AV +F    R    PD  T++ L+ GL++   +  A +   +M 
Sbjct: 161 YNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMP 220

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD+V YN L+ G  +  E  +   +  ++       P++ TY  ++ G CK G+ 
Sbjct: 221 RSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRF 280

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +   ++  M +  ++P  +T+ +LI G  + G++  A  +   ++  G + D   ++SL
Sbjct: 281 KEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340

Query: 409 IDGYCRNGQLNQGLKLCDE---------------MKG------------------KNLS- 434
           + G+C+ G++ +  K  D                +KG                  K+++ 
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400

Query: 435 -PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+  TF  LI+ LC+    N A    ++ + +      F Y+ +I+G C  G + +A  
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  +M++  CKP+   +  LI G C   R  +A+ I++KM   GC+P  IT N+LI  L 
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520

Query: 554 KGGMPNEAFRIMQRASED 571
           K     EA  + +   E+
Sbjct: 521 KAEKYQEASSVAREMVEN 538



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 167/339 (49%), Gaps = 9/339 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           + +TYN++++ L + G+ D    ++D +  D   +P++      +    + G  + A  +
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTI 426

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             + R     +  F Y+S++N L       +AV ++++  +   +P++  +N LI G  +
Sbjct: 427 FEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQ 486

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +     A   +  M   GCSP ++TYNTLI GLC+  +      + +E+  ++ F+PD+ 
Sbjct: 487 VYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM-VENGFTPDIT 545

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY----M 389
           TY S+I G     K+D A  I+ ++   G+K   +  N+LI G    G +  A +    M
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDM 605

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           +E+       P++VT+++L+DG    G +++   L   +    L P++ ++   I  LC 
Sbjct: 606 KEKK---NCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCS 662

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
            +R+++  + L ++    ++P    +N ++    K G +
Sbjct: 663 CDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 153/343 (44%), Gaps = 40/343 (11%)

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHEL---LKE 321
           +++   SR      A + F  + S  GC+P I ++N L+    R    +        L  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
             F    +P++ TY  V+   C  G +D+A  +++ +    + P  +T++ L+ G  K  
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTF 440
            +  A  + + M   G  PDVV +++L+ G  + G+  + +++ D++ K     PN+ T+
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            ++++ LCK  R  +     +++  N+L P    Y  +I G C++G+VD A  + +E+ +
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEA--------------ISIFNKMLR----------- 535
                D   +  L+ G C  GR+ EA              +  +N M++           
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEA 387

Query: 536 ----------IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
                     + C PD +T  +LI  L + G  N+AF I + A
Sbjct: 388 IELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEA 430


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 207/413 (50%), Gaps = 1/413 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN+++  LC+ G  ++   V D M+  G  PN   +   +    +A K D A  + 
Sbjct: 411 NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                   +  +  + SL++ L ++   D+A  ++++       P+   +  LIQ   + 
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  +   + + +M   GCSPD++  N+ +  + +  EV +G  L +E+K +    PDV +
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQG-LVPDVRS 589

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G  K G   +   ++ EM   G+    + +N +IDGF K G +  A  + E M 
Sbjct: 590 YSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           + G  P VVT+ S++DG  +  +L++   L +E K   +  NV  ++ LI+   K  R++
Sbjct: 650 TKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A   L++L    L P  + +N ++D   KA  +DEA V    M+  +C P+ +T++I+I
Sbjct: 710 EAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMI 769

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            G CM  +  +A   + +M + G  P++IT  ++I+ L K G   EA  +  R
Sbjct: 770 NGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDR 822



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 204/426 (47%), Gaps = 6/426 (1%)

Query: 141 KFLEFSRVNLSLNHSF-----KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K  E   + L L+H       +T+  ++  L   G  D    +++ M     +PN  +  
Sbjct: 462 KLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYT 521

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + +  + G+ +    +  +      +    + NS ++ + K    ++   +F+E    
Sbjct: 522 SLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQ 581

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              PD  +++ILI GL + G  ++ ++ FY+M   G   D++ YNT+I G C+  +V + 
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           ++LL+E+K K    P VVTY SV+ G  K+ ++D+A  ++ E  S G+  + V ++ LID
Sbjct: 642 YQLLEEMKTKG-LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLID 700

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           GFGKVG +  A  + E ++  G  P+  T++ L+D   +  ++++       MK    SP
Sbjct: 701 GFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSP 760

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           N  T++I+IN LC   + N A  F ++++   L P    Y  +I G  KAGNV EA  + 
Sbjct: 761 NAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLF 820

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
              +     PD   +  +I G     + ++A  +F +    GC  +  T   L+  L K 
Sbjct: 821 DRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKA 880

Query: 556 GMPNEA 561
               +A
Sbjct: 881 DCLEQA 886



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 207/437 (47%), Gaps = 4/437 (0%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH- 187
           V+KRL +  +  ++  +        H  + YN  +  +      D ++ + + M   G  
Sbjct: 106 VMKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFG 165

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           L N   +E  V+S +++ K   A G++   R  +   +   Y +L+ AL   N  D  + 
Sbjct: 166 LSNHVSVEL-VASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLT 224

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +F +   +  + +   F  L++  +R G +  A     +M S   + D+V YN  I    
Sbjct: 225 LFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFG 284

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +V +V    +   E+K +    PD VTYT++I   CK  ++D+A  ++ E++     P  
Sbjct: 285 KVGKVDMAWKFFHEMKAQG-LVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCV 343

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             +N +I G+G  G    A  + ER    G +P V+ ++ ++    R G++ + L++ DE
Sbjct: 344 YAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDE 403

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+ ++ +PN+ T+ ILI+ LCK   L  A +    +K   L P     N +ID  CKA  
Sbjct: 404 MR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQK 462

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +DEA  I   ++ K C PD  TF  LI G   +GR+ +A S++ KML     P+ +   S
Sbjct: 463 LDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTS 522

Query: 548 LISCLLKGGMPNEAFRI 564
           LI    K G   +  +I
Sbjct: 523 LIQNFFKCGRKEDGHKI 539



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 219/507 (43%), Gaps = 83/507 (16%)

Query: 135 NPKLGLKFLEFSRVNLSLN-HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           +P L L F +   +    N H F T   ++R     G  D+   + D M+S+    +  +
Sbjct: 220 DPMLTL-FHQMQEIGYEANVHLFTT---LVRVFAREGRIDAALSLLDEMKSNSFTADLVL 275

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               +    + GK D A     + +   +      Y +L+  L K    DEAV +F+E  
Sbjct: 276 YNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELD 335

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VN 310
              S P  + +N +I G    G+  +A+         GC P ++ YN +++ L R   V 
Sbjct: 336 LNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVE 395

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           E  R H+     + + + +P++ TY  +I   CK G+++ A  + + M   G+ P+ +T 
Sbjct: 396 EALRIHD-----EMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTV 450

Query: 371 NV-----------------------------------LIDGFGKVGNMVSAEYMRERMLS 395
           N+                                   LIDG G+ G +  A  + E+ML 
Sbjct: 451 NIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD 510

Query: 396 FGYLPDVVTFSSLI----------DGY----------C---------------RNGQLNQ 420
              +P+VV ++SLI          DG+          C               + G++ +
Sbjct: 511 SDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEK 570

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
           G  L +E+K + L P+V +++ILI+ L K     +  +   ++K   L      YN VID
Sbjct: 571 GRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVID 630

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           GFCK+G VD+A  ++ EM+ K  +P  VT+  ++ G     R+ EA  +F +   IG   
Sbjct: 631 GFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDL 690

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           + +  +SLI    K G  +EA+ I++ 
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEE 717



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 194/427 (45%), Gaps = 13/427 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +F  Y  ++ +L      D +  +F  M+  G+  N  +    V    R G+ DAA  LL
Sbjct: 202 AFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLL 261

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +    T    +YN  ++   K    D A   F E       PD  T+  LI  L + 
Sbjct: 262 DEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKA 321

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             + +A E F ++      P +  YNT+I G     +    + LL+  K K    P V+ 
Sbjct: 322 RRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI-PSVIA 380

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +++   + GK+++A  I++EM      P+  T+N+LID   K G + +A  +++ M 
Sbjct: 381 YNCILTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMK 439

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+++T + +ID  C+  +L++   +   +  K  SP+  TF  LI+ L +  R++
Sbjct: 440 EAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVD 499

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT--- 511
           DA    +++  +D +P   +Y  +I  F K G  ++ + I  EM  + C PD +      
Sbjct: 500 DAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYM 559

Query: 512 --ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
             +   G   KGR     ++F ++   G  PD  + + LI  L+K G   E +++     
Sbjct: 560 DCVFKAGEVEKGR-----ALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614

Query: 570 EDQNLQL 576
           E Q L L
Sbjct: 615 E-QGLHL 620



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 17/343 (4%)

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY----DMGSFGCSPDI 296
           + +EA+ +F E     SQP+     +++  + R+ +V  AF++F           C P++
Sbjct: 86  DVEEALNVFDEM----SQPE-----VIVGVMKRLKDVNVAFQYFRWVERKTQQAHC-PEV 135

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
             YN  +  + R   +    ++L+E+     F         +++ + K  K+ +A G+  
Sbjct: 136 --YNAFLMVMARTRNLDYLEQILEEMSVAG-FGLSNHVSVELVASFVKSHKLKEAFGVIE 192

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M     +P+   +  LI              +  +M   GY  +V  F++L+  + R G
Sbjct: 193 MMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREG 252

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           +++  L L DEMK  + + ++  + + I+   K  +++ A +F  ++K   LVP    Y 
Sbjct: 253 RIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYT 312

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I   CKA  +DEA  +  E++  R  P    +  +I+G+   G+  EA S+  +  R 
Sbjct: 313 TLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRK 372

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           GC P  I  N +++CL + G   EA RI     +D    L ++
Sbjct: 373 GCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTY 415


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 203/413 (49%), Gaps = 6/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++++LC+    D  + +   M + G  PN+      +SS    G     + L  +F
Sbjct: 182 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF 241

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P        +YN+L+N L K+ +    V +  E       P+  +++ LI  LS  G++
Sbjct: 242 EP-----VVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQI 296

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF     M   GC P+I T ++L+ G           ++  ++       P+VV Y +
Sbjct: 297 ELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNT 356

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+C  G +DKA  ++  M   G  P+  T+  LI+GF K G++  A Y+  +ML+ G
Sbjct: 357 LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG 416

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV ++S+++  CR+ +  +   L + M  +N +P+V TF   I  LC   RL+ A 
Sbjct: 417 CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 476

Query: 458 RFLKQLKWNDLVPKPFM-YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +  +Q++     P   + YN ++DG  KA  ++EA  +  E+  +  +    T+  L+ G
Sbjct: 477 KVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHG 536

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            C  G    A+ +  KM+  G +PD+IT+N +I    K G    A +++   S
Sbjct: 537 SCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVS 589



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 206/447 (46%), Gaps = 10/447 (2%)

Query: 129 VIKRLDNPK---LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD 185
           V+KRL       L L F +    +    H+  T+ +++R L   G  DSVQ +   M+  
Sbjct: 45  VLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 104

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G   +  +    +S   + G  + A  +  + +      S  +YN +L+ L+ +N     
Sbjct: 105 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 164

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             ++++  R   +P+ +T+N+L++ L +  +V  A +   +M + GC P+ V+Y T+IS 
Sbjct: 165 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISS 224

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           +C V  V  G +L +       F P V  Y ++I+G CK         + +EM   GI P
Sbjct: 225 MCEVGMVKEGRQLAE------RFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISP 278

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           + ++++ LI+     G +  A  +  +ML  G  P++ T SSL+ G    G     L + 
Sbjct: 279 NVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMW 338

Query: 426 DEM-KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
           ++M +G  L PNV  +  L+   C    ++ A      ++     P    Y  +I+GF K
Sbjct: 339 NQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTK 398

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G+++ A  I  +M    C P+ V +T ++   C   +  EA S+   M +  CAP   T
Sbjct: 399 RGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 458

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASED 571
            N+ I  L   G  + A ++ ++  + 
Sbjct: 459 FNAFIKGLCDAGRLDWAEKVFRQMEQQ 485



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 137/300 (45%), Gaps = 2/300 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D++ +    +R  G  PN       V      G  D A  +         + +   Y SL
Sbjct: 333 DALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSL 392

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           +N   K+ + + AVY++ +       P+   +  +++ L R  + K+A      M    C
Sbjct: 393 INGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENC 452

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           +P + T+N  I GLC    +    ++ ++++ +    P++VTY  ++ G  K  ++++A 
Sbjct: 453 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAY 512

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+  E+   G++ S  T+N L+ G    G    A  +  +M+  G  PD +T + +I  Y
Sbjct: 513 GLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAY 572

Query: 413 CRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           C+ G+  + +++ D +    +   P+V ++T +I  LC+ N   D     +++    ++P
Sbjct: 573 CKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 13/297 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN +++  C  G  D    VF +M   G  PN       ++   + G  + A  + ++ 
Sbjct: 353 AYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKM 412

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +Y S++ AL + +   EA  + +   +    P   TFN  I+GL   G +
Sbjct: 413 LTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 472

Query: 278 KKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             A + F  M   + C P+IVTYN L+ GL + N +   + L +E+ F         TY 
Sbjct: 473 DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREI-FMRGVEWSTSTYN 531

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G C  G    A  +  +M   G  P  +T N++I  + K G    A  M + ++S 
Sbjct: 532 TLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLD-LVSC 590

Query: 397 G---YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           G   + PDV++++++I G CR+     G+ L + M  + + P       ++ ++C+E
Sbjct: 591 GRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP-------ILRSVCQE 640


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 213/428 (49%), Gaps = 23/428 (5%)

Query: 156 FKTYNLVMRSLCEM------GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+ + S+C         L D  + ++  M +   + N   +  F       GK D 
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  L+ +         T  Y+ ++  L      ++A  +F+E   +   PD +T+ ILI 
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A   F +M S GCSP +VTY  LI    +  +V + +++   +   +   
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM-VDAGCR 390

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+ VTY +++ G CK G + KA  +Y ++                +   + P+ VT+  L
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 450

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +DG  K   +  A  + + MLS G  P+ + + +LIDG+C+ G+++   ++  +M     
Sbjct: 451 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 510

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+V+T+T LI+ + K+ RL+ A + L Q+  +   P    Y  +IDG C+ G  ++A  
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALK 570

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +++ MEEK C P+ VT+T LI G    G++  ++ +F +M R GC+P+ +T   LI+ L 
Sbjct: 571 LLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLC 630

Query: 554 KGGMPNEA 561
             G+ ++A
Sbjct: 631 AAGLLDKA 638



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 193/385 (50%), Gaps = 15/385 (3%)

Query: 164 RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           R LC +G  D    +   M   G +P++      ++    A K + A  L  + +   VT
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
              + Y  L+++  K    ++A ++F+E   +   P   T+  LI    +  +V +A + 
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE---------------F 328
           F+ M   GC P+ VTY  L+ GLC+   +++  E+  ++   S+                
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P+VVTY +++ G CK  K+D A  + + M S G +P+ + ++ LIDGF K G + SA+ 
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M   GYLP V T++SLID   ++G+L+  +K+  +M   + +PNV T+T +I+ LC
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +      A + L  ++     P    Y  +IDG  KAG +D +  +  +M  K C P+ V
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 620

Query: 509 TFTILIIGHCMKGRMVEAISIFNKM 533
           T+ +LI   C  G + +A  +  +M
Sbjct: 621 TYRVLINHLCAAGLLDKARLLLGEM 645



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 202/429 (47%), Gaps = 19/429 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC     +   ++F  M+  G  P+       + S  +AG  + A+ L  + 
Sbjct: 290 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 349

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R    + +   Y +L++A +K     +A  +F        +P+  T+  L+ GL + G +
Sbjct: 350 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 409

Query: 278 KKAFEFFYDM-GS---------FGC------SPDIVTYNTLISGLCRVNEVARGHELLKE 321
            KAFE +  + G+         F C      +P++VTY  L+ GLC+ ++V   HELL +
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL-D 468

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
               S   P+ + Y ++I G+CK GK+D A  ++ +M  CG  PS  T+  LID   K G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +  +ML     P+VVT++++IDG CR G+  + LKL   M+ K  SPNV T+T
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ L K  +++ +     Q+      P    Y  +I+  C AG +D+A +++ EM++ 
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                   +   I G       + ++ I  +M   G  P       LI C  K G    A
Sbjct: 649 YWPKYLQGYRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 562 FRIMQRASE 570
             + +   E
Sbjct: 707 MELHKEMME 715



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 178/439 (40%), Gaps = 58/439 (13%)

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++ +    +S  + A   D A   L + R      +   Y +LL+  +K+        + 
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---- 305
                    P+   FN L+       +   A++    M + GC P  V YN  I      
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 225

Query: 306 -------------------------------------LCRVNEVARGHELLKEVKFKSEF 328
                                                LC V +  +  +L+KE+  K  F
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG-F 284

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD  TY+ VI+  C   K++KA  ++ EM   G+ P   T+ +LID F K G +  A++
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 344

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E M S G  P VVT+++LI  Y +  Q+ Q   +   M      PN  T+  L++ LC
Sbjct: 345 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 404

Query: 449 KENRLNDARRFLKQL----------------KWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           K   ++ A     +L                  + L P    Y  ++DG CKA  VD A+
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++  M    C+P+ + +  LI G C  G++  A  +F +M + G  P   T  SLI  +
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 524

Query: 553 LKGGMPNEAFRIMQRASED 571
            K G  + A +++ +  +D
Sbjct: 525 FKDGRLDLAMKVLSQMLKD 543



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 188/435 (43%), Gaps = 21/435 (4%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  T    +R  C     DS   + D+    G+ P+       V     AG+ D    + 
Sbjct: 8   AVATLRASLRRTCSHAAGDSEDPLKDF----GYRPSKVTYNALVQVLSSAGQVDLGFRVQ 63

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSR 273
            +       M  F      +AL K+    +A+ M  +E F+L    DT     +I GL  
Sbjct: 64  KEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKL----DTVLCTHMISGLME 119

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
                +A  F + M    C P++VTY TL+SG  +  ++     ++  +      +P+  
Sbjct: 120 ASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIIN-MMMTEGCNPNPS 178

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS------AE 387
            + S++  YC       A  + N M +CG  P  V +N+ I        + S      AE
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 238

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   ML+   + + V  ++     C  G+ ++  +L  EM  K   P+  T++ +I  L
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 298

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C   ++  A    +++K   + P  + Y  +ID FCKAG +++A  +  EM    C P  
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+T LI  +    ++ +A  IF++M+  GC P+D+T  +L+  L K G  ++AF +  +
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 568 A-----SEDQNLQLP 577
                 S D +   P
Sbjct: 419 LIGTSDSADSDFYFP 433



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 192/482 (39%), Gaps = 102/482 (21%)

Query: 142 FLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           FL F  + +  +     TY +++ S C+ GL +  Q +F+ MRS G  P        + +
Sbjct: 308 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 367

Query: 201 CIRAGKCDAAKGLLSQF-----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE---- 251
            ++A +   A  +  +      RP +VT     Y +L++ L K  N  +A  ++ +    
Sbjct: 368 YLKAKQVPQANDIFHRMVDAGCRPNDVT-----YGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 252 --------YF----RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
                   YF    R    P+  T+  L+ GL +  +V  A E    M S GC P+ + Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 300 NTLISGLCRVNEVARGHELLKEVK----------------------------------FK 325
           + LI G C+  ++    E+  ++                                    K
Sbjct: 483 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              +P+VVTYT++I G C++G+ +KA  + + M   G  P+ VT+  LIDG GK G +  
Sbjct: 543 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 602

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG------------------------ 421
           +  +  +M   G  P+ VT+  LI+  C  G L++                         
Sbjct: 603 SLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQ 662

Query: 422 ---------LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
                    L + +EM+     P    + +LI+   K  RL  A    K++     VP  
Sbjct: 663 GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSS 719

Query: 473 F-----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
                 MY  +I   C A  V+EA  + +EM  +   P+   F  LI G     +  EA+
Sbjct: 720 VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779

Query: 528 SI 529
            +
Sbjct: 780 QL 781



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 37/179 (20%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV------------------------ 177
           F + SR   S N  + TY +++  LC  GL D  ++                        
Sbjct: 607 FTQMSRKGCSPN--YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 664

Query: 178 ---------VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR--PGEVTMST 226
                    + + M S G +P +P+    +    +AG+ + A  L  +    P  V    
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 724

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            MY SL+ AL   +  +EA  ++ E  R    P+   F  LI+GL  + +  +A +  Y
Sbjct: 725 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 213/428 (49%), Gaps = 23/428 (5%)

Query: 156 FKTYNLVMRSLCEM------GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+ + S+C         L D  + ++  M +   + N   +  F       GK D 
Sbjct: 147 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 206

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  L+ +         T  Y+ ++  L      ++A  +F+E   +   PD +T+ ILI 
Sbjct: 207 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 266

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A   F +M S GCSP +VTY  LI    +  +V + +++   +   +   
Sbjct: 267 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRM-VDAGCR 325

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+ VTY +++ G CK G + KA  +Y ++                +   + P+ VT+  L
Sbjct: 326 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 385

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +DG  K   +  A  + + MLS G  P+ + + +LIDG+C+ G+++   ++  +M     
Sbjct: 386 VDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 445

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+V+T+T LI+ + K+ RL+ A + L Q+  +   P    Y  +IDG C+ G  ++A  
Sbjct: 446 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALK 505

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +++ MEEK C P+ VT+T LI G    G++  ++ +F +M R GC+P+ +T   LI+ L 
Sbjct: 506 LLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLC 565

Query: 554 KGGMPNEA 561
             G+ ++A
Sbjct: 566 AAGLLDKA 573



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 193/385 (50%), Gaps = 15/385 (3%)

Query: 164 RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           R LC +G  D    +   M   G +P++      ++    A K + A  L  + +   VT
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
              + Y  L+++  K    ++A ++F+E   +   P   T+  LI    +  +V +A + 
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 315

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE---------------F 328
           F+ M   GC P+ VTY  L+ GLC+   +++  E+  ++   S+                
Sbjct: 316 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 375

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P+VVTY +++ G CK  K+D A  + + M S G +P+ + ++ LIDGF K G + SA+ 
Sbjct: 376 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 435

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M   GYLP V T++SLID   ++G+L+  +K+  +M   + +PNV T+T +I+ LC
Sbjct: 436 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 495

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +      A + L  ++     P    Y  +IDG  KAG +D +  +  +M  K C P+ V
Sbjct: 496 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYV 555

Query: 509 TFTILIIGHCMKGRMVEAISIFNKM 533
           T+ +LI   C  G + +A  +  +M
Sbjct: 556 TYRVLINHLCAAGLLDKARLLLGEM 580



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 202/429 (47%), Gaps = 19/429 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC     +   ++F  M+  G  P+       + S  +AG  + A+ L  + 
Sbjct: 225 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 284

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R    + +   Y +L++A +K     +A  +F        +P+  T+  L+ GL + G +
Sbjct: 285 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 344

Query: 278 KKAFEFFYDM-GS---------FGC------SPDIVTYNTLISGLCRVNEVARGHELLKE 321
            KAFE +  + G+         F C      +P++VTY  L+ GLC+ ++V   HELL +
Sbjct: 345 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL-D 403

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
               S   P+ + Y ++I G+CK GK+D A  ++ +M  CG  PS  T+  LID   K G
Sbjct: 404 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 463

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +  +ML     P+VVT++++IDG CR G+  + LKL   M+ K  SPNV T+T
Sbjct: 464 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 523

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ L K  +++ +     Q+      P    Y  +I+  C AG +D+A +++ EM++ 
Sbjct: 524 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 583

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                   +   I G       + ++ I  +M   G  P       LI C  K G    A
Sbjct: 584 YWPKYLQGYRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 641

Query: 562 FRIMQRASE 570
             + +   E
Sbjct: 642 MELHKEMME 650



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 178/439 (40%), Gaps = 58/439 (13%)

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++ +    +S  + A   D A   L + R      +   Y +LL+  +K+        + 
Sbjct: 41  DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 100

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---- 305
                    P+   FN L+       +   A++    M + GC P  V YN  I      
Sbjct: 101 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 160

Query: 306 -------------------------------------LCRVNEVARGHELLKEVKFKSEF 328
                                                LC V +  +  +L+KE+  K  F
Sbjct: 161 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG-F 219

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD  TY+ VI+  C   K++KA  ++ EM   G+ P   T+ +LID F K G +  A++
Sbjct: 220 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 279

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E M S G  P VVT+++LI  Y +  Q+ Q   +   M      PN  T+  L++ LC
Sbjct: 280 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 339

Query: 449 KENRLNDARRFLKQL----------------KWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           K   ++ A     +L                  + L P    Y  ++DG CKA  VD A+
Sbjct: 340 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 399

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++  M    C+P+ + +  LI G C  G++  A  +F +M + G  P   T  SLI  +
Sbjct: 400 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 459

Query: 553 LKGGMPNEAFRIMQRASED 571
            K G  + A +++ +  +D
Sbjct: 460 FKDGRLDLAMKVLSQMLKD 478



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 167/366 (45%), Gaps = 17/366 (4%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
           M  F      +AL K+    +A+ M  +E F+L    DT     +I GL       +A  
Sbjct: 8   MDRFTVGCFAHALCKEGRWADALDMIEREDFKL----DTVLCTHMISGLMEASYFDEAMS 63

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           F + M    C P++VTY TL+SG  +  ++     ++  +      +P+   + S++  Y
Sbjct: 64  FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIIN-MMMTEGCNPNPSLFNSLVHSY 122

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS------AEYMRERMLSF 396
           C       A  + N M +CG  P  V +N+ I        + S      AE +   ML+ 
Sbjct: 123 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 182

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             + + V  ++     C  G+ ++  +L  EM  K   P+  T++ +I  LC   ++  A
Sbjct: 183 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 242

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +++K   + P  + Y  +ID FCKAG +++A  +  EM    C P  VT+T LI  
Sbjct: 243 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 302

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA-----SED 571
           +    ++ +A  IF++M+  GC P+D+T  +L+  L K G  ++AF +  +      S D
Sbjct: 303 YLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSAD 362

Query: 572 QNLQLP 577
            +   P
Sbjct: 363 SDFYFP 368



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 192/482 (39%), Gaps = 102/482 (21%)

Query: 142 FLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           FL F  + +  +     TY +++ S C+ GL +  Q +F+ MRS G  P        + +
Sbjct: 243 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 302

Query: 201 CIRAGKCDAAKGLLSQF-----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE---- 251
            ++A +   A  +  +      RP +VT     Y +L++ L K  N  +A  ++ +    
Sbjct: 303 YLKAKQVPQANDIFHRMVDAGCRPNDVT-----YGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 252 --------YF----RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
                   YF    R    P+  T+  L+ GL +  +V  A E    M S GC P+ + Y
Sbjct: 358 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 417

Query: 300 NTLISGLCRVNEVARGHELLKEVK----------------------------------FK 325
           + LI G C+  ++    E+  ++                                    K
Sbjct: 418 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              +P+VVTYT++I G C++G+ +KA  + + M   G  P+ VT+  LIDG GK G +  
Sbjct: 478 DSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDL 537

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG------------------------ 421
           +  +  +M   G  P+ VT+  LI+  C  G L++                         
Sbjct: 538 SLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQ 597

Query: 422 ---------LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
                    L + +EM+     P    + +LI+   K  RL  A    K++     VP  
Sbjct: 598 GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VPSS 654

Query: 473 F-----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
                 MY  +I   C A  V+EA  + +EM  +   P+   F  LI G     +  EA+
Sbjct: 655 VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 714

Query: 528 SI 529
            +
Sbjct: 715 QL 716



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 37/179 (20%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV------------------------ 177
           F + SR   S N  + TY +++  LC  GL D  ++                        
Sbjct: 542 FTQMSRKGCSPN--YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF 599

Query: 178 ---------VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR--PGEVTMST 226
                    + + M S G +P +P+    +    +AG+ + A  L  +    P  V    
Sbjct: 600 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 659

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            MY SL+ AL   +  +EA  ++ E  R    P+   F  LI+GL  + +  +A +  Y
Sbjct: 660 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 718


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 6/388 (1%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
           + D   S G  P+  +    + +  R G+  DAA+ L +  R G   +  F YN+L+   
Sbjct: 65  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG-TAVDVFAYNTLVAGY 123

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            +    D A  +      +   PD +T+  +I+GL   G V +A     DM   GC P +
Sbjct: 124 CRYGQLDAARRLIAS---MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           VTY  L+  +C+     +  E+L E++ K   +P++VTY  +I+G C+ G++D A    N
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDAREFLN 239

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            ++S G +P  V++  ++ G          E +   M+    +P+ VTF  L+  +CR G
Sbjct: 240 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 299

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            + + +++ ++M G   + N     I+IN +CK+ R++DA +FL  +      P    Y 
Sbjct: 300 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 359

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            V+ G C+A   ++A  ++ EM  K C P++VTF   I   C KG + +A  +  +M   
Sbjct: 360 TVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH 419

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRI 564
           GC  + +T N+L++     G  + A  +
Sbjct: 420 GCEVNIVTYNALVNGFCVQGRVDSALEL 447



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 200/444 (45%), Gaps = 42/444 (9%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++R+LC  G       V       G   +       V+   R G+ DAA+ L++      
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---P 140

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V    + Y  ++  L  +    EA+ +  +      QP   T+ +L++ + +     +A 
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           E   +M + GC+P+IVTYN +I+G+CR   V    E L  +     F PD V+YT+V+ G
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKG 259

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML------- 394
            C   + +    ++ EM      P+ VTF++L+  F + G +  A  + E+M        
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 319

Query: 395 ----------------------------SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
                                       S+G  PD +++++++ G CR  +     +L  
Sbjct: 320 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM  KN  PN  TF   I  LC++  +  A   ++Q+  +        YN +++GFC  G
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            VD A  +   M    CKP+ +T+T L+ G C   R+  A  +  +ML+  CAP+ +T N
Sbjct: 440 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496

Query: 547 SLISCLLKGGMPNEAFRIMQRASE 570
            L+S   + G+ +EA  ++++  E
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMME 520



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 196/412 (47%), Gaps = 4/412 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++ ++C+         V D MR+ G  PN       ++   R G+ D A+  L
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++         T  Y ++L  L      ++   +F E       P+  TF++L++   R 
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A +    M   GC+ +    N +I+ +C+   V    + L  +      SPD ++
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG-CSPDTIS 357

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT+V+ G C+  + + A  +  EM      P+ VTFN  I    + G +  A  + E+M 
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   ++VT+++L++G+C  G+++  L+L   M  K   PN  T+T L+  LC   RL+
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLD 474

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L ++   D  P    +N ++  FC+ G +DEA  +V +M E  C P+ +T+  L+
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G        EA+ + + ++  G +PD +T +S+I  L +     EA ++  
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 178/359 (49%), Gaps = 4/359 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++R  C  G+ +    V + M   G   N+ +    +++  + G+ D A   L+  
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +  T  Y ++L  L +    ++A  + KE  R    P+  TFN  I  L + G +
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 406

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   GC  +IVTYN L++G C    V    EL   +  K    P+ +TYT+
Sbjct: 407 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTT 462

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C   ++D A  +  EM      P+ VTFNVL+  F + G M  A  + E+M+  G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++T+++L+DG   +    + L+L   +    +SP++ T++ +I  L +E+R+ +A 
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +    ++   + PK  +YN ++   CK  N D A    A M    C P+++T+  LI G
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 171/344 (49%), Gaps = 4/344 (1%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           ++   L+  L ++    +A  + +   R  +  D + +N L+ G  R G++  A      
Sbjct: 79  YLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL--- 135

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + S   +PD  TY  +I GLC    V     LL ++  +    P VVTYT ++   CK  
Sbjct: 136 IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG-CQPSVVTYTVLLEAVCKST 194

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
              +A  + +EM + G  P+ VT+NV+I+G  + G +  A     R+ S+G+ PD V+++
Sbjct: 195 GFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 254

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +++ G C   +     +L  EM  KN  PN  TF +L+   C+   +  A + L+Q+  +
Sbjct: 255 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 314

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
                  + N VI+  CK G VD+A   +  M    C PD +++T ++ G C   R  +A
Sbjct: 315 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 374

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +  +M+R  C P+++T N+ I  L + G+  +A  ++++ SE
Sbjct: 375 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 164/344 (47%), Gaps = 14/344 (4%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-- 217
           N+V+ ++C+ G  D      + M S G  P++      +    RA + + AK LL +   
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383

Query: 218 ---RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
               P EVT +TF+       L++Q     A  + ++      + +  T+N L+ G    
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQ-----ATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E FY M    C P+ +TY TL++GLC    +    ELL E+  + + +P+VVT
Sbjct: 439 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEM-LQKDCAPNVVT 494

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +  ++S +C+ G MD+A  +  +M   G  P+ +T+N L+DG     N   A  +   ++
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G  PD+VT+SS+I    R  ++ + +K+   ++   + P    +  ++ ALCK    +
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            A  F   +  N  +P    Y  +I+G      + E   ++ E+
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L +  +L D    +  +P+VY  T LI  LC+  R +DA R L+  + +      F YN 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++ G+C+ G +D A  ++A M      PD  T+T +I G C +GR+ EA+S+ + ML  G
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C P  +T   L+  + K     +A  ++
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVL 203



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 4/221 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G  DS   +F  M      PN+      ++    A + DAA  LL++ 
Sbjct: 427 TYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEM 483

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   +N L++   ++   DEA+ + ++       P+  T+N L+ G++     
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNS 543

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E  + + S G SPDIVTY+++I  L R + V    ++   V+      P  V Y  
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ-DLGMRPKAVIYNK 602

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           ++   CK    D A   +  M S G  P+ +T+  LI+G  
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 643


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 178/332 (53%), Gaps = 1/332 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           + +++N L++   K  +   A  +F E  R   +P   +FN LI G  R   V++ F   
Sbjct: 225 NVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLK 284

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M S   SPD+ TY+ LI+GLC+ + V   + L  E+  +    P+ VT+T++I G CK
Sbjct: 285 SVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM-CEMGLVPNGVTFTTLIDGQCK 343

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK+D A   +  M   GI+P  +T+N LI+G  + G++  A  +   M+  G+ PD +T
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F++L+DG C++G ++  L++ D M  + +  +   FT LI+ LC++ R+ DA R LK + 
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
                P    Y  VID FCK G+V     ++ EM+     P  VT+  L+ G C +G+M 
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            A  + + ML +   P+DIT N L+    K G
Sbjct: 524 NAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 209/420 (49%), Gaps = 31/420 (7%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           V DY    G+ PN  +    +    + G    A+ +  +     +  S   +N+L++   
Sbjct: 217 VLDY----GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           +  N +E   +          PD +T++ LI GL +   V++A   F +M   G  P+ V
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 298 TYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           T+ TLI G C+   ++   R  E++K+   +    PD++TY ++I+G C+ G + +A  +
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIR----PDLITYNALINGLCRDGDLKEARKL 388

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            NEM   G KP  +TF  L+DG  K G+M SA  +++RM+  G   D V F++LI G CR
Sbjct: 389 LNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCR 448

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           +G++    ++  +M      P+  T+T++I+  CK+  +    + LK+++ +  VP    
Sbjct: 449 DGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVT 508

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +++GFCK G +  A +++  M      P+ +TF IL+ GHC  G  V+   IFN   
Sbjct: 509 YNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FKIFNG-- 565

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ---NLQLPSWKKAVPLRTNTDI 591
             G   D  +  +L+         NE+ +I    S+DQ    L+ P+    +  R NTD+
Sbjct: 566 EKGLVSDYASYTALV---------NESIKI----SKDQLKSVLECPT-HIGIQYRQNTDM 611



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 172/339 (50%), Gaps = 26/339 (7%)

Query: 236 LVKQNNADEAV----YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           LVK+NN    V    Y+ +   +L  QP                     +EF+ ++  +G
Sbjct: 180 LVKKNNFSIPVCGCDYLLRRVMKLNQQPG------------------HCWEFYLEVLDYG 221

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P++  +N L+ G C++ +V     +  E+  +    P VV++ ++ISGYC+   +++ 
Sbjct: 222 YPPNVYLFNILMHGFCKIGDVMNARMVFDEIS-RRGLRPSVVSFNTLISGYCRSKNVEEG 280

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             + + M S  I P   T++ LI+G  K   +  A  + + M   G +P+ VTF++LIDG
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C++G+++  L+  + MK + + P++ T+  LIN LC++  L +AR+ L ++  N   P 
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +  ++DG CK G++D A  I   M E+  + D V FT LI G C  GR+ +A  +  
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLK 460

Query: 532 KMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIMQR 567
            ML  G  PDD T   +I C  K G   M  +  + MQR
Sbjct: 461 DMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQR 499



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 1/189 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G     + + + M  +G  P+       +  C + G  D+A  +  + 
Sbjct: 368 TYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRM 427

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    + +L++ L +     +A  M K+      +PD  T+ ++I    + G+V
Sbjct: 428 VEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDV 487

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K   +   +M   G  P +VTYN L++G C+  ++     LL  +    E  P+ +T+  
Sbjct: 488 KMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAM-LNMEVVPNDITFNI 546

Query: 338 VISGYCKLG 346
           ++ G+CK G
Sbjct: 547 LLDGHCKHG 555


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 246/513 (47%), Gaps = 34/513 (6%)

Query: 68  HFHGLANGGSRPFDEKEVNYRC--SNEFWFVKVVC---TLLLRSSYLSDTCAR------- 115
           +F+ LA+  S P   +EV  +   S+++ F++ V    T  L S+ L + C++       
Sbjct: 56  NFNSLASSESTPPITZEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDF 115

Query: 116 ------YLCEKLSPLNSLEVIKRLDNPKLGLKFLE-------------FSRVNLSLNHSF 156
                 +  +  S   ++ ++ RL +PKL L+ L+             F  + LS +   
Sbjct: 116 IHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDR-L 174

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
              + ++  L E  L  + + +  +M   G  PN       +      G  + A+ +L  
Sbjct: 175 SVKSSIVFDLLEGKLKKAREFI-GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA 233

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   +   ++ Y SL++ + K+   +EA  +F +   +   P+  T+N LI G    G+
Sbjct: 234 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 293

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++AF +  +M   G  P + TYN L+  L     +    +++KE++ K    PD +TY 
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR-KKGIIPDAITYN 352

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+GY + G   +A  ++NEM S GI+P+ VT+  LI    +   M  A+ + E++L  
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV+ F+++IDG+C NG + +   L  EM  K++ P+  TF  L+   C+E ++ +A
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R  L ++K   + P    YN +I G+ + G++ +A  +  EM      P  +T+  LI  
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            C       A  +  +M+  G +PDD T  SLI
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 565



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 165/307 (53%), Gaps = 1/307 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P+  ++N +I G S  G ++ A      M   G  PD  TY +LISG+C+   +     
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  ++  +    P+ VTY ++I GYC  G +++A    +EM   GI PS  T+N+L+   
Sbjct: 265 LFDKM-VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
              G M  A+ M + M   G +PD +T++ LI+GY R G   +   L +EM  K + P  
Sbjct: 324 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTH 383

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+T LI  L + NR+ +A    +++    + P   M+N +IDG C  GNV+ A +++ E
Sbjct: 384 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKE 443

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M+ K   PD+VTF  L+ G C +G++ EA  + ++M   G  PD I+ N+LIS   + G 
Sbjct: 444 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGD 503

Query: 558 PNEAFRI 564
             +AF +
Sbjct: 504 IKDAFXV 510



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 159/332 (47%), Gaps = 4/332 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  +C+ G  +    +FD M   G +PN+      +      G  + A     + 
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   YN L++AL  +    EA  M KE  +    PD  T+NILI G SR G  
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+AF+   +M S G  P  VTY +LI  L R N +    +L +++      SPDV+ + +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI-LDQGVSPDVIMFNA 423

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C  G +++A  +  EM+   + P  VTFN L+ G  + G +  A  + + M   G
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +++++LI GY R G +     + DEM     +P + T+  LI  LCK    + A 
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 543

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
             LK++    + P    Y  +I+G    GNVD
Sbjct: 544 ELLKEMVNKGISPDDSTYLSLIEGM---GNVD 572



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 133/239 (55%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F P+VV+Y ++I GY   G ++ A  I + M   GI+P + T+  LI G  K G +  A 
Sbjct: 204 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 263

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + ++M+  G +P+ VT+++LIDGYC  G L +     DEM  K + P+V T+ +L++AL
Sbjct: 264 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
             E R+ +A   +K+++   ++P    YN +I+G+ + GN   A  +  EM  K  +P  
Sbjct: 324 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTH 383

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           VT+T LI     + RM EA  +F K+L  G +PD I  N++I      G    AF +++
Sbjct: 384 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 1/227 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++      G       + + M S G  P        +    R  +   A  L  + 
Sbjct: 350 TYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 409

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+    M+N++++      N + A  + KE  R    PD  TFN L+QG  R G+V
Sbjct: 410 LDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 469

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A     +M   G  PD ++YNTLISG  R  ++     +  E+     F+P ++TY +
Sbjct: 470 EEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM-LSIGFNPTLLTYNA 528

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +I   CK  + D A  +  EM + GI P   T+  LI+G G V  +V
Sbjct: 529 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLV 575



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 40/85 (47%)

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G + +A   +  ME    KP+ V++  +I G+  +G +  A  I + M   G  PD  T 
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 546 NSLISCLLKGGMPNEAFRIMQRASE 570
            SLIS + K G   EA  +  +  E
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVE 271


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 6/388 (1%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
           + D   S G  P+  +    + +  R G+  DAA+ L +  R G   +  F YN+L+   
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG-TAVDVFAYNTLVAGY 154

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            +    D A  +      +   PD +T+  +I+GL   G V +A     DM   GC P +
Sbjct: 155 CRYGQLDAARRLIAS---MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           VTY  L+  +C+     +  E+L E++ K   +P++VTY  +I+G C+ G++D A    N
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDAREFLN 270

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            ++S G +P  V++  ++ G          E +   M+    +P+ VTF  L+  +CR G
Sbjct: 271 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 330

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            + + +++ ++M G   + N     I+IN +CK+ R++DA +FL  +      P    Y 
Sbjct: 331 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 390

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            V+ G C+A   ++A  ++ EM  K C P++VTF   I   C KG + +A  +  +M   
Sbjct: 391 TVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH 450

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRI 564
           GC  + +T N+L++     G  + A  +
Sbjct: 451 GCEVNIVTYNALVNGFCVQGRVDSALEL 478



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 196/412 (47%), Gaps = 4/412 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++ ++C+         V D MR+ G  PN       ++   R G+ D A+  L
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++         T  Y ++L  L      ++   +F E       P+  TF++L++   R 
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A +    M   GC+ +    N +I+ +C+   V    + L  +      SPD ++
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG-CSPDTIS 388

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT+V+ G C+  + + A  +  EM      P+ VTFN  I    + G +  A  + E+M 
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   ++VT+++L++G+C  G+++  L+L   M  K   PN  T+T L+  LC   RL+
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLD 505

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L ++   D  P    +N ++  FC+ G +DEA  +V +M E  C P+ +T+  L+
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G        EA+ + + ++  G +PD +T +S+I  L +     EA ++  
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 617



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 200/444 (45%), Gaps = 42/444 (9%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++R+LC  G       V       G   +       V+   R G+ DAA+ L++      
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---P 171

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V    + Y  ++  L  +    EA+ +  +      QP   T+ +L++ + +     +A 
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           E   +M + GC+P+IVTYN +I+G+CR   V    E L  +     F PD V+YT+V+ G
Sbjct: 232 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKG 290

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML------- 394
            C   + +    ++ EM      P+ VTF++L+  F + G +  A  + E+M        
Sbjct: 291 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 350

Query: 395 ----------------------------SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
                                       S+G  PD +++++++ G CR  +     +L  
Sbjct: 351 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 410

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM  KN  PN  TF   I  LC++  +  A   ++Q+  +        YN +++GFC  G
Sbjct: 411 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 470

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            VD A  +   M    CKP+ +T+T L+ G C   R+  A  +  +ML+  CAP+ +T N
Sbjct: 471 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 527

Query: 547 SLISCLLKGGMPNEAFRIMQRASE 570
            L+S   + G+ +EA  ++++  E
Sbjct: 528 VLVSFFCQKGLMDEAIELVEQMME 551



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 179/359 (49%), Gaps = 4/359 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++R  C  G+ +    V + M   G   N+ +    +++  + G+ D A   L+  
Sbjct: 318 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 377

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +  T  Y ++L  L +    ++A  + KE  R    P+  TFN  I  L + G +
Sbjct: 378 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 437

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   GC  +IVTYN L++G C    V    EL   +  K    P+ +TYT+
Sbjct: 438 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTT 493

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C   ++D A  +  EM      P+ VTFNVL+  F + G M  A  + E+M+  G
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++T+++L+DG  ++    + L+L   +    +SP++ T++ +I  L +E+R+ +A 
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +    ++   + PK  +YN ++   CK  N D A    A M    C P+++T+  LI G
Sbjct: 614 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 672



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 171/344 (49%), Gaps = 4/344 (1%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           ++   L+  L ++    +A  + +   R  +  D + +N L+ G  R G++  A      
Sbjct: 110 YLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL--- 166

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + S   +PD  TY  +I GLC    V     LL ++  +    P VVTYT ++   CK  
Sbjct: 167 IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG-CQPSVVTYTVLLEAVCKST 225

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
              +A  + +EM + G  P+ VT+NV+I+G  + G +  A     R+ S+G+ PD V+++
Sbjct: 226 GFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 285

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +++ G C   +     +L  EM  KN  PN  TF +L+   C+   +  A + L+Q+  +
Sbjct: 286 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 345

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
                  + N VI+  CK G VD+A   +  M    C PD +++T ++ G C   R  +A
Sbjct: 346 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 405

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +  +M+R  C P+++T N+ I  L + G+  +A  ++++ SE
Sbjct: 406 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 165/344 (47%), Gaps = 14/344 (4%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-- 217
           N+V+ ++C+ G  D      + M S G  P++      +    RA + + AK LL +   
Sbjct: 355 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 414

Query: 218 ---RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
               P EVT +TF+       L++Q     A  + ++      + +  T+N L+ G    
Sbjct: 415 KNCPPNEVTFNTFICILCQKGLIEQ-----ATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 469

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E FY M    C P+ +TY TL++GLC    +    ELL E+  + + +P+VVT
Sbjct: 470 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEM-LQKDCAPNVVT 525

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +  ++S +C+ G MD+A  +  +M   G  P+ +T+N L+DG  K  N   A  +   ++
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 585

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G  PD+VT+SS+I    R  ++ + +K+   ++   + P    +  ++ ALCK    +
Sbjct: 586 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 645

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            A  F   +  N  +P    Y  +I+G      + E   ++ E+
Sbjct: 646 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 32/252 (12%)

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  + +   S G  P       LI    + G    A  +       G   DV  +++L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 410 DGYCRNGQLN--------------------------------QGLKLCDEMKGKNLSPNV 437
            GYCR GQL+                                + L L D+M  +   P+V
Sbjct: 152 AGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+T+L+ A+CK      A   L +++     P    YN +I+G C+ G VD+A   +  
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           +     +PD V++T ++ G C   R  +   +F +M+   C P+++T + L+    +GGM
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331

Query: 558 PNEAFRIMQRAS 569
              A +++++ S
Sbjct: 332 VERAIQVLEQMS 343



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 4/221 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G  DS   +F  M      PN+      ++    A + DAA  LL++ 
Sbjct: 458 TYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEM 514

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   +N L++   ++   DEA+ + ++       P+  T+N L+ G+++    
Sbjct: 515 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 574

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E  + + S G SPDIVTY+++I  L R + V    ++   V+      P  V Y  
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ-DLGMRPKAVIYNK 633

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           ++   CK    D A   +  M S G  P+ +T+  LI+G  
Sbjct: 634 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 674



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 75/165 (45%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C+ GL D    + + M   G  PN       +    +    + A  LL   
Sbjct: 525 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 584

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+     Y+S++  L +++  +EA+ MF     L  +P    +N ++  L +    
Sbjct: 585 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNT 644

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
             A +FF  M S GC P+ +TY TLI GL   + +    +LL+E+
Sbjct: 645 DGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 201/399 (50%), Gaps = 15/399 (3%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM---STFMY 229
           D VQ     MR  G       +   + +  RAG  D  + L + +R  ++        +Y
Sbjct: 15  DGVQYALQEMRLRGVACTEDALVAAIGAFARAGSAD--RALKTFYRASDLGCRDPGVRVY 72

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N LL+AL+++N     V ++    +    P+ +T+N+LI+ L +   V  A +   +M  
Sbjct: 73  NHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSR 132

Query: 290 FGCSPDIVTYNTLISGLCRVNEV--ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            GC PD V++ T++SG+C++  V  ARG        F +E  P   +Y +V+   C   +
Sbjct: 133 KGCHPDEVSHGTIVSGMCKLGRVEEARG--------FLAETVPVQASYNAVVHALCGEFR 184

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           M +   + NEM   G++P+ VT+  ++D F K   +  A  +  RM+S G  P+V+TF++
Sbjct: 185 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTA 244

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+ G+  +G+++  L +   M  +  +P+  ++ +LI  LC    L  A  F   +K N 
Sbjct: 245 LVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNA 304

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L+P    Y+ ++DGF  AG++D A +I  EM+   CKP+ V +T +I   C K    +A 
Sbjct: 305 LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAE 364

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           S+ +KML   C P+ +T N+LI  L   G    A  +  
Sbjct: 365 SLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFH 403



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 189/401 (47%), Gaps = 10/401 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++R+LC+    D+ + + D M   G  P+       VS   + G+ + A+G L++ 
Sbjct: 106 TYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET 165

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P + +     YN++++AL  +    E   +  E  +   QP+  T+  ++    +  E+
Sbjct: 166 VPVQAS-----YNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKAREL 220

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--FSPDVVTY 335
           + A      M S GC+P+++T+  L+ G     E  + H+ L    +  +  ++P  ++Y
Sbjct: 221 RMACAILARMVSMGCTPNVLTFTALVKGF---FEDGKVHDALSMWHWMVDEGWAPSTISY 277

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I G C +G +  A   +N M    + P+A T++ L+DGF   G++  A  +   M S
Sbjct: 278 NVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKS 337

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+VV ++++ID  C+    +Q   L D+M   N  PN  TF  LI  LC   R+  
Sbjct: 338 SGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGR 397

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A      ++ N   P    YN ++ G  + GN  +A  +V EM     +   VT+  +I 
Sbjct: 398 ALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVIN 457

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             C       A+ +  +M+  G  PD  T N++I    K G
Sbjct: 458 CLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEG 498



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 149/367 (40%), Gaps = 36/367 (9%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  +  TY  ++ + C+         +   M S G  PN       V      GK 
Sbjct: 196 VQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKV 255

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  +           ST  YN L+  L    +   A+  F    R    P+  T++ L
Sbjct: 256 HDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTL 315

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIV------------------------------ 297
           + G S  G++  A   + +M S GC P++V                              
Sbjct: 316 VDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC 375

Query: 298 -----TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
                T+NTLI  LC    V R   +   ++ ++   P+  TY  ++ G  + G    A 
Sbjct: 376 PPNTVTFNTLIGRLCDCGRVGRALNVFHGMR-RNGCHPNDRTYNELLHGLFREGNHKDAF 434

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +  EM + G + S VT+N +I+   ++     A  +  RM+  G  PD  TF+++I  Y
Sbjct: 435 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 494

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G+++    L  +M   N   NV  +TILI+ LC + +L++A  +L ++ +  + P  
Sbjct: 495 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 554

Query: 473 FMYNPVI 479
             +N ++
Sbjct: 555 ATWNVLV 561


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 6/388 (1%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
           + D   S G  P+  +    + +  R G+  DAA+ L +  R G   +  F YN+L+   
Sbjct: 65  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG-TAVDVFAYNTLVAGY 123

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            +    D A  +      +   PD +T+  +I+GL   G V +A     DM   GC P +
Sbjct: 124 CRYGQLDAARRLIAS---MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           VTY  L+  +C+     +  E+L E++ K   +P++VTY  +I+G C+ G++D A    N
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDAREFLN 239

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            ++S G +P  V++  ++ G          E +   M+    +P+ VTF  L+  +CR G
Sbjct: 240 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 299

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            + + +++ ++M G   + N     I+IN +CK+ R++DA +FL  +      P    Y 
Sbjct: 300 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 359

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            V+ G C+A   ++A  ++ EM  K C P++VTF   I   C KG + +A  +  +M   
Sbjct: 360 TVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEH 419

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRI 564
           GC  + +T N+L++     G  + A  +
Sbjct: 420 GCEVNIVTYNALVNGFCVQGRVDSALEL 447



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 196/412 (47%), Gaps = 4/412 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++ ++C+         V D MR+ G  PN       ++   R G+ D A+  L
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++         T  Y ++L  L      ++   +F E       P+  TF++L++   R 
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A +    M   GC+ +    N +I+ +C+   V    + L  +      SPD ++
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG-CSPDTIS 357

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT+V+ G C+  + + A  +  EM      P+ VTFN  I    + G +  A  + E+M 
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   ++VT+++L++G+C  G+++  L+L   M  K   PN  T+T L+  LC   RL+
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLD 474

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L ++   D  P    +N ++  FC+ G +DEA  +V +M E  C P+ +T+  L+
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G        EA+ + + ++  G +PD +T +S+I  L +     EA ++  
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 200/444 (45%), Gaps = 42/444 (9%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++R+LC  G       V       G   +       V+   R G+ DAA+ L++      
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---P 140

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V    + Y  ++  L  +    EA+ +  +      QP   T+ +L++ + +     +A 
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           E   +M + GC+P+IVTYN +I+G+CR   V    E L  +     F PD V+YT+V+ G
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKG 259

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML------- 394
            C   + +    ++ EM      P+ VTF++L+  F + G +  A  + E+M        
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 319

Query: 395 ----------------------------SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
                                       S+G  PD +++++++ G CR  +     +L  
Sbjct: 320 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM  KN  PN  TF   I  LC++  +  A   ++Q+  +        YN +++GFC  G
Sbjct: 380 EMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG 439

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            VD A  +   M    CKP+ +T+T L+ G C   R+  A  +  +ML+  CAP+ +T N
Sbjct: 440 RVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496

Query: 547 SLISCLLKGGMPNEAFRIMQRASE 570
            L+S   + G+ +EA  ++++  E
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMME 520



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 179/359 (49%), Gaps = 4/359 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++R  C  G+ +    V + M   G   N+ +    +++  + G+ D A   L+  
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +  T  Y ++L  L +    ++A  + KE  R    P+  TFN  I  L + G +
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLI 406

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   GC  +IVTYN L++G C    V    EL   +  K    P+ +TYT+
Sbjct: 407 EQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTT 462

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C   ++D A  +  EM      P+ VTFNVL+  F + G M  A  + E+M+  G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++T+++L+DG  ++    + L+L   +    +SP++ T++ +I  L +E+R+ +A 
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +    ++   + PK  +YN ++   CK  N D A    A M    C P+++T+  LI G
Sbjct: 583 KMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 171/344 (49%), Gaps = 4/344 (1%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           ++   L+  L ++    +A  + +   R  +  D + +N L+ G  R G++  A      
Sbjct: 79  YLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL--- 135

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + S   +PD  TY  +I GLC    V     LL ++  +    P VVTYT ++   CK  
Sbjct: 136 IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG-CQPSVVTYTVLLEAVCKST 194

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
              +A  + +EM + G  P+ VT+NV+I+G  + G +  A     R+ S+G+ PD V+++
Sbjct: 195 GFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 254

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +++ G C   +     +L  EM  KN  PN  TF +L+   C+   +  A + L+Q+  +
Sbjct: 255 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 314

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
                  + N VI+  CK G VD+A   +  M    C PD +++T ++ G C   R  +A
Sbjct: 315 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 374

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +  +M+R  C P+++T N+ I  L + G+  +A  ++++ SE
Sbjct: 375 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 165/344 (47%), Gaps = 14/344 (4%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-- 217
           N+V+ ++C+ G  D      + M S G  P++      +    RA + + AK LL +   
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383

Query: 218 ---RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
               P EVT +TF+       L++Q     A  + ++      + +  T+N L+ G    
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQ-----ATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E FY M    C P+ +TY TL++GLC    +    ELL E+  + + +P+VVT
Sbjct: 439 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEM-LQKDCAPNVVT 494

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +  ++S +C+ G MD+A  +  +M   G  P+ +T+N L+DG  K  N   A  +   ++
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 554

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G  PD+VT+SS+I    R  ++ + +K+   ++   + P    +  ++ ALCK    +
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            A  F   +  N  +P    Y  +I+G      + E   ++ E+
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L +  +L D    +  +P+VY  T LI  LC+  R +DA R L+  + +      F YN 
Sbjct: 59  LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++ G+C+ G +D A  ++A M      PD  T+T +I G C +GR+ EA+S+ + ML  G
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C P  +T   L+  + K     +A  ++
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVL 203



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 4/221 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G  DS   +F  M      PN+      ++    A + DAA  LL++ 
Sbjct: 427 TYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEM 483

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   +N L++   ++   DEA+ + ++       P+  T+N L+ G+++    
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 543

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E  + + S G SPDIVTY+++I  L R + V    ++   V+      P  V Y  
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ-DLGMRPKAVIYNK 602

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           ++   CK    D A   +  M S G  P+ +T+  LI+G  
Sbjct: 603 ILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 643



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 75/165 (45%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C+ GL D    + + M   G  PN       +    +    + A  LL   
Sbjct: 494 TFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 553

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+     Y+S++  L +++  +EA+ MF     L  +P    +N ++  L +    
Sbjct: 554 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNT 613

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
             A +FF  M S GC P+ +TY TLI GL   + +    +LL+E+
Sbjct: 614 DGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 193/399 (48%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G       ++  M   G  P        +    R G  D A  + S  
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y+ L++   K  + + A Y+F         P  +T+NI I GL ++G  
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +        G  P  +TYN+++ G  +   V+      +E+  +S  SP+V+TYT+
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREM-CESGVSPNVITYTT 633

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+CK    D A  + NEM + G++     +  LIDGF K  ++ +A ++   +L  G
Sbjct: 634 LINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGG 693

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V ++SLI GY     +   L L   M G+ +S ++ T+T LI+ L KE RL  A 
Sbjct: 694 LSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLAL 753

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    ++P   +Y  +I+G C  G ++ A  I+AEME     P+   +  LI GH
Sbjct: 754 DLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGH 813

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
              G + EA  + N+ML  G  P+D T + LI+  +KGG
Sbjct: 814 FKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 211/436 (48%), Gaps = 23/436 (5%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCE-MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           FLE     + L+ +   Y++V+++ C+ + +  +  ++ D MR  G +P+       + +
Sbjct: 267 FLEAKSRGVKLDAA--AYSIVIQAFCKNLDVELACGLLKD-MRDKGWVPSEGTFTSVIGA 323

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           C++ G    A  L  +     V M+  +  +L+    KQ+    A+  F +       P+
Sbjct: 324 CVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPN 383

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+ +LI+   + G + KA++ +  M +    P +   N+LI G  +V       +L  
Sbjct: 384 RVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFD 443

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E     + + ++ TY S++S  CK GKM +AT ++ +M   G+ P+ V++N +I G  + 
Sbjct: 444 EA-VACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQ 501

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           GN+  A  +   ML  G  P+V+T+S L+DGY +NG       + D M  +N+ P+ +T+
Sbjct: 502 GNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTY 561

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            I IN LCK  R ++A+  LK+      VP    YN ++DGF K G+V  A     EM E
Sbjct: 562 NIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCE 621

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG---------------CAPDDI-T 544
               P+ +T+T LI G C       A+ + N+M   G               C   DI T
Sbjct: 622 SGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIET 681

Query: 545 VNSLISCLLKGGM-PN 559
            + L S LL GG+ PN
Sbjct: 682 ASWLFSELLDGGLSPN 697



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 173/368 (47%), Gaps = 1/368 (0%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +S   + GK   A  L  +     +  +   YNS++    +Q N D A  +F +     
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            +P+  T++IL+ G  + G+ + AF  F  M      P   TYN  I+GLC+V   +   
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQ 578

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           ++LK+   K  F P  +TY S++ G+ K G +  A   Y EM   G+ P+ +T+  LI+G
Sbjct: 579 DMLKKFVEKG-FVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLING 637

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K  N   A  MR  M + G   D+  + +LIDG+C+   +     L  E+    LSPN
Sbjct: 638 FCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPN 697

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
              +  LI+     N +  A    K++    +      Y  +IDG  K G +  A  + +
Sbjct: 698 SVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYS 757

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM  K   PD + +T+LI G C KG++  A  I  +M R    P+    N+LI+   K G
Sbjct: 758 EMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAG 817

Query: 557 MPNEAFRI 564
              EAFR+
Sbjct: 818 NLQEAFRL 825



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 192/383 (50%), Gaps = 4/383 (1%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           + ++S I+A K + A G  ++    ++       N LL ALVK +   EA  ++++    
Sbjct: 179 YLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLK 238

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
               D +T +I+++   +    ++A +FF +  S G   D   Y+ +I   C+  +V   
Sbjct: 239 GVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELA 298

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             LLK+++ K  + P   T+TSVI    K G M +A  + +EM SCG++ + V    L+ 
Sbjct: 299 CGLLKDMRDKG-WVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVK 357

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G+ K   +VSA    ++M   G  P+ VT++ LI+  C+NG + +   L  +MK KN+ P
Sbjct: 358 GYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICP 417

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
            V+    LI    K     +A +   +    D +   F YN ++   CK G + EA  + 
Sbjct: 418 TVFIVNSLIRGFLKVESREEASKLFDEAVACD-IANIFTYNSLLSWLCKEGKMSEATTLW 476

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M +K   P KV++  +I+GHC +G +  A S+F+ ML  G  P+ IT + L+    K 
Sbjct: 477 QKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKN 536

Query: 556 GMPNEAFRIMQRASEDQNLQLPS 578
           G    AF +  R   D+N+ +PS
Sbjct: 537 GDTEYAFYVFDRMV-DENI-VPS 557



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 199/445 (44%), Gaps = 37/445 (8%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +++  C+     S    FD M  +G  PN       +  C + G    A  L +Q +   
Sbjct: 355 LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKN 414

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +  + F+ NSL+   +K  + +EA  +F E        + +T+N L+  L + G++ +A 
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDEAVAC-DIANIFTYNSLLSWLCKEGKMSEAT 473

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             +  M   G +P  V+YN++I G CR   +     +  ++       P+V+TY+ ++ G
Sbjct: 474 TLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM-LDCGLKPNVITYSILMDG 532

Query: 342 Y-----------------------------------CKLGKMDKATGIYNEMNSCGIKPS 366
           Y                                   CK+G+  +A  +  +    G  P 
Sbjct: 533 YFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPV 592

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            +T+N ++DGF K G++ SA      M   G  P+V+T+++LI+G+C+N   +  LK+ +
Sbjct: 593 CLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRN 652

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM+ K L  ++  +  LI+  CK+  +  A     +L    L P   +YN +I G+    
Sbjct: 653 EMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLN 712

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           N++ A  +   M  +    D  T+T LI G   +GR+V A+ ++++M   G  PD I   
Sbjct: 713 NMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYT 772

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
            LI+ L   G    A +I+     D
Sbjct: 773 VLINGLCGKGQLENAQKILAEMERD 797



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 163/365 (44%), Gaps = 36/365 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++   C  G  D    VF  M   G  PN       +    + G  + A  +  + 
Sbjct: 490 SYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRM 549

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S F YN  +N L K     EA  M K++      P   T+N ++ G  + G V
Sbjct: 550 VDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSV 609

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   + +M   G SP+++TY TLI+G C+ N      ++  E++ K     D+  Y +
Sbjct: 610 SSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKG-LELDIAAYGA 668

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--- 394
           +I G+CK   ++ A+ +++E+   G+ P++V +N LI G+  + NM +A  +++RML   
Sbjct: 669 LIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEG 728

Query: 395 --------------------------------SFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                                           + G +PD++ ++ LI+G C  GQL    
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQ 788

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           K+  EM+  +++PNV  +  LI    K   L +A R   ++    L P    Y+ +I+G 
Sbjct: 789 KILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGK 848

Query: 483 CKAGN 487
            K GN
Sbjct: 849 IKGGN 853



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 106/238 (44%)

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           +F  D+  Y  +++ Y K  K++ A G +N +    I P     N L+    K   +  A
Sbjct: 169 DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEA 228

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + E+M+  G   D  T   ++    ++    +  K   E K + +  +   ++I+I A
Sbjct: 229 REVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQA 288

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK   +  A   LK ++    VP    +  VI    K GN+ EA  +  EM     + +
Sbjct: 289 FCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMN 348

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            V  T L+ G+C + ++V A+  F+KM   G +P+ +T   LI    K G   +A+ +
Sbjct: 349 VVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDL 406



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 37/249 (14%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           +N  L LK     R N  L      Y  ++   C+    ++   +F  +   G  PNS +
Sbjct: 642 NNTDLALKMRNEMR-NKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVI 700

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               +S        +AA  L  +     ++     Y +L++ L+K+     A+ ++ E  
Sbjct: 701 YNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMS 760

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
                PD   + +LI GL   G+++ A +   +M     +P++  YN LI          
Sbjct: 761 AKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI---------- 810

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
                                     +G+ K G + +A  ++NEM   G+ P+  T+++L
Sbjct: 811 --------------------------AGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDIL 844

Query: 374 IDGFGKVGN 382
           I+G  K GN
Sbjct: 845 INGKIKGGN 853



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 37/212 (17%)

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGL--------------------------------- 422
           F +  D+  ++ L++ Y +  +LN  +                                 
Sbjct: 168 FDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYE 227

Query: 423 --KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             ++ ++M  K +  + +T  I++ A  K+N   +A++F  + K   +      Y+ VI 
Sbjct: 228 AREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ 287

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK-GRMVEAISIFNKMLRIGCA 539
            FCK  +V+ A  ++ +M +K   P + TFT  +IG C+K G MVEA+ + ++M+  G  
Sbjct: 288 AFCKNLDVELACGLLKDMRDKGWVPSEGTFTS-VIGACVKQGNMVEALRLKDEMVSCGVQ 346

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            + +   +L+    K      A     + +E+
Sbjct: 347 MNVVVATTLVKGYCKQDKLVSALEFFDKMNEN 378


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 196/403 (48%), Gaps = 6/403 (1%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           +LC+MG ++    +F  M++ G  PN       +S    +G    A GL  +     V  
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  YN+L+N LV+      A  +     R    P+  T+N +I+G   +G+ KKA    
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G S ++VTYNT+I G C          +L  ++      PD  +YT +I G+CK
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR-DGGCKPDEWSYTELICGFCK 507

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           + KM+ A G++NEM   G+ P+ VT+  LIDG+ K   + +A  + E M   G  P+V T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++ LI G  +    +   +LC  M  + + PNV T+T +I+ LCK    + A     ++ 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
               +P    Y+ +I    + G V+EA  + AE+E     PD++T+  +I  + M G++ 
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            A +   +M++ GC P   T   LI      G+ NE     QR
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIK-----GLKNEYLLADQR 725



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 200/413 (48%), Gaps = 7/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS---DGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           TY+ ++  LC+ G    V   FD +R     G LP +      + +    G  + A  L 
Sbjct: 287 TYSTLINGLCDSG---RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF 343

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              +      + + Y +L++ L        A+ +F    R    P+T T+N LI  L   
Sbjct: 344 VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +K AF     MG  GCSP+IVTYN +I G C + +  +   ++  +  +   S ++VT
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVT 462

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I GYC  G    A  I + M   G KP   ++  LI GF K+  M SA  +   M+
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+ VT+++LIDGYC++ +L+    L + MK     PNV T+ +LI+ L K+N  +
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    K +    + P    Y  +IDG CK G+   A  +  +M E+ C P+ +T++ LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
                +G++ EA ++F ++ R G  PD+IT   +I   +  G    AF  + R
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 215/473 (45%), Gaps = 69/473 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++  L  +G+  +V   +  M S+G  PN  +    +++  + G    A+ ++ + 
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E++  TF Y S++    ++++ D A+ +F +  +   +P+T T++ LI GL   G V
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 278 KKAFE-----------------------------------FFYDMGSFGCSPDIVTYNTL 302
            +AF+                                    F DM + GC P++ TY  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 303 ISGLCRVN--EVARG--HE-------------------LLKEVKFKSEF----------- 328
           ISGLC     +VA G  H                    L++  + K  F           
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP++VTY  +I GYC LG   KA  + N M   G   + VT+N +I G+   GN  SA  
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G  PD  +++ LI G+C+  ++     L +EM    L PN  T+T LI+  C
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ +L+ A   L+ +K +   P    YN +I G  K  N   A  +   M E+   P+ V
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           T+T +I G C  G    A+ +FNKM+  GC P+ +T +SLI  L + G   EA
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 5/334 (1%)

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDT----WTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+K  ++ EA+     +  + SQ       + ++ L+  LSR+G      + ++ M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P+++ YN +I+ LC+   VA    ++K+V F+SE SPD  TYTS+I G+C+   +D A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKV-FESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++N+M   G +P+ VT++ LI+G    G +  A  +   M+  G LP   T +  I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C  G      +L  +MK K   PNVYT+T LI+ LC    L  A     ++  + + P 
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I+   +   +  A V++  M    C P+ VT+  +I G+C+ G   +A+ + N
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            ML+ G + + +T N++I      G    A RI+
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 182/471 (38%), Gaps = 63/471 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C +G      +V + M   GH  N       +     +G   +A  +L   
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G      + Y  L+    K +  + A  +F E       P+  T+  LI G  +  ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A      M   GC P++ TYN LI GL + N  +   EL K V  +    P+VVTYT+
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK-VMIEEGIFPNVVTYTA 605

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G    A  ++N+M   G  P+ +T++ LI   G+ G +  AE +   +   G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665

Query: 398 YLPDVVTFSSLIDGYCRNGQ-------------------------LNQGLK----LCDE- 427
            +PD +T+  +I+ Y  +G+                         L +GLK    L D+ 
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725

Query: 428 ---------------------------MKGKNLSP--NVYTFTILINALCKENRLNDARR 458
                                       K   L P  +V     L++ L    R  +A  
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANE 785

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L  +    L P    YN ++    +  NVD A  +   M  + C+     +  LI   C
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQ 566
              R  EA   F  ML     PDD+    LI  LL+ G  +   E   IM+
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 144/357 (40%), Gaps = 12/357 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN+++  L +       + +   M  +G  PN       +    + G    A  + ++
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y+SL+ AL ++   +EA  +F E  R    PD  T+  +I+     G+
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V+ AF F   M   GC P + TY  LI GL       +   LL + +  +   PDVV   
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-------KNEYLLADQRLAA--LPDVVPNC 736

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S   GY +    D  + +  ++       S    N L+      G    A  +   M+S 
Sbjct: 737 SF--GY-QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD   ++SL+    R   ++  + +   M  +    ++  +  LI ALC+ +R  +A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           R   + +      P   +   +IDG  + G  D     +  ME +R  P    +TIL
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 219/437 (50%), Gaps = 23/437 (5%)

Query: 156 FKTYNLVMRSLC---EMGLHDSVQV---VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+ + S+C   E+   D + +   V++ M +   + N      F       GK D 
Sbjct: 212 YVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDM 271

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++           T  Y+ ++  L +    ++A  +F+E   +   PD +T+ ILI 
Sbjct: 272 AFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILID 331

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A  +F +M S GCS ++VTY  L+    +  ++ +  ++   +   +   
Sbjct: 332 SFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRM-IDAGCP 390

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+ +TY++++ G CK G++ KA  +Y ++                ++  I P+ VT+  L
Sbjct: 391 PNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGAL 450

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           IDG  K   +V A+ + + MLS G  P+ + + +LIDG+C+ G+++   ++   M     
Sbjct: 451 IDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGY 510

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P V+T+T LI+A+ K+ RL+ A + L Q+  +   P    Y  +IDG C+ G   +A  
Sbjct: 511 LPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALK 570

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +++ MEEK C P+ VT+T LI G    G++  ++ +F +M   GCAP+ +T   LI+   
Sbjct: 571 LLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCC 630

Query: 554 KGGMPNEAFRIMQRASE 570
             G+ +EA  ++    +
Sbjct: 631 AAGLLDEAHSLLSEMKQ 647



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 215/494 (43%), Gaps = 88/494 (17%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LCE    +   ++F  M+S G  P+       + S  +AG  + A+    + 
Sbjct: 290 TYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM 349

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R    + +   Y +LL+A +K     +A  +F         P+T T++ L+ GL + GE+
Sbjct: 350 RSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEI 409

Query: 278 KKAFE----------------FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +KA E                +F    +   +P++VTY  LI GLC+ ++V    ELL +
Sbjct: 410 QKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELL-D 468

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
               +   P+ + Y ++I G+CK+GK+D A  ++  M+ CG  P+  T+  LID   K  
Sbjct: 469 AMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDR 528

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +  +M+     P+VVT++++IDG CR G+  + LKL   M+ K  SPNV T+T
Sbjct: 529 RLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYT 588

Query: 442 -----------------------------------ILINALCKENRLNDARRFLKQLK-- 464
                                              +LIN  C    L++A   L ++K  
Sbjct: 589 ALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT 648

Query: 465 -W------------------------------NDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            W                              +  VP   +Y  +ID F KAG ++EA  
Sbjct: 649 YWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALE 708

Query: 494 IVAEMEEKRCK---PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           +  EM E         K  +T LI   C+  ++ +A  +++++ R G  P+      LI 
Sbjct: 709 LHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIK 768

Query: 551 CLLKGGMPNEAFRI 564
            L+K    NEA ++
Sbjct: 769 GLIKVNKWNEALQL 782



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 204/446 (45%), Gaps = 55/446 (12%)

Query: 142 FLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           FL F  + ++ +N    TY +++ S C+ GL +  +  FD MRS G              
Sbjct: 308 FLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIG-------------- 353

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
                 C A               +   Y +LL+A +K     +A  +F         P+
Sbjct: 354 ------CSA---------------NVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPN 392

Query: 261 TWTFNILIQGLSRIGEVKKAFE----------------FFYDMGSFGCSPDIVTYNTLIS 304
           T T++ L+ GL + GE++KA E                +F    +   +P++VTY  LI 
Sbjct: 393 TITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALID 452

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+ ++V    ELL +    +   P+ + Y ++I G+CK+GK+D A  ++  M+ CG  
Sbjct: 453 GLCKAHKVVDAQELL-DAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYL 511

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+  T+  LID   K   +  A  +  +M+     P+VVT++++IDG CR G+  + LKL
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKL 571

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
              M+ K  SPNV T+T LI+ L K  +++ + +   Q+      P    Y  +I+  C 
Sbjct: 572 LSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCA 631

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           AG +DEA+ +++EM++         +  ++ G     + + ++ +  ++   G  P    
Sbjct: 632 AGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQG--FSKKFIASLGLLEELESHGTVPIAPV 689

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASE 570
              LI    K G   EA  + +   E
Sbjct: 690 YGLLIDNFSKAGRLEEALELHKEMME 715



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/500 (22%), Positives = 208/500 (41%), Gaps = 93/500 (18%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++  L E  L D        MR +  +PN       ++  ++  +    K +++      
Sbjct: 113 MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEG 172

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI------------- 268
              +  ++NSL+++     +   A  + K        P    +NI I             
Sbjct: 173 CNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPD 232

Query: 269 ----------------------------QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
                                       + L  +G+   AF+    M   G  PD  TY+
Sbjct: 233 LLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYS 292

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            +I+ LC   +V +   L +E+K     +PDV TYT +I  +CK G +++A   ++EM S
Sbjct: 293 KVITFLCEAMKVEKAFLLFQEMK-SVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRS 351

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G   + VT+  L+  + K   +  A  +  RM+  G  P+ +T+S+L+DG C+ G++ +
Sbjct: 352 IGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQK 411

Query: 421 GLKLCDEMKGK----------------NLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
             ++  ++ G                 +++PNV T+  LI+ LCK +++ DA+  L  + 
Sbjct: 412 ACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAML 471

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEAN-------------------------------- 492
            N   P   +Y+ +IDGFCK G +D A                                 
Sbjct: 472 SNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLD 531

Query: 493 ---VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
               ++++M E  C P+ VT+T +I G C  G   +A+ + + M   GC+P+ +T  +LI
Sbjct: 532 LAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALI 591

Query: 550 SCLLKGGMPNEAFRIMQRAS 569
             L K G  + + ++  + S
Sbjct: 592 DGLGKSGKVDLSLQLFIQMS 611



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 138/351 (39%), Gaps = 45/351 (12%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P   T+N L+Q L+  G++   F    +M   G   D  T       LC+    +    
Sbjct: 37  RPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALV 96

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +++    + +F  D V  T +ISG  +    D+A    + M      P+ VT+  L+ GF
Sbjct: 97  MIE----REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGF 152

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K   +   + +   M+  G  P+   F+SL+  YC         KL   M      P  
Sbjct: 153 LKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGY 212

Query: 438 YTFTILINALC-----------------------------KENRLNDAR----------- 457
             + I I ++C                             K N  N AR           
Sbjct: 213 VAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMA 272

Query: 458 -RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + +K +     VP    Y+ VI   C+A  V++A ++  EM+     PD  T+TILI  
Sbjct: 273 FQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDS 332

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C  G + +A S F++M  IGC+ + +T  +L+   LK     +A  I  R
Sbjct: 333 FCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 3/175 (1%)

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           FGY P   T+++L+      GQ++ G ++  EM       + +T      ALCKE R +D
Sbjct: 34  FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSD 93

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L  ++  D      +   +I G  +A   DEA   +  M    C P+ VT+  L+ 
Sbjct: 94  A---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLT 150

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G   K ++     I N M++ GC P+    NSL+           A+++++R ++
Sbjct: 151 GFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMAD 205



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 95/245 (38%), Gaps = 9/245 (3%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           + P   TY +++      G+MD    +  EM+  G      T         K G    A 
Sbjct: 36  YRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDAL 95

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M ER     +  D V  + +I G       ++ +     M+  +  PNV T+  L+   
Sbjct: 96  VMIERE---DFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGF 152

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            K+ +L   +R +  +      P P ++N ++  +C A +   A  ++  M +  C P  
Sbjct: 153 LKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGY 212

Query: 508 VTFTILIIGHCMKGR------MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           V + I I   C          +  A  ++ +ML   C  + +   +   CL   G  + A
Sbjct: 213 VAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMA 272

Query: 562 FRIMQ 566
           F+I++
Sbjct: 273 FQIIK 277



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 3/199 (1%)

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           E+   G +PS  T+N L+      G M     +++ M   G+  D  T        C+ G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           + +  L +   ++ ++   +    T +I+ L + +  ++A  FL +++ N  +P    Y 
Sbjct: 90  RWSDALVM---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ GF K   +     I+  M ++ C P+   F  L+  +C       A  +  +M   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 537 GCAPDDITVNSLISCLLKG 555
           GC P  +  N  I  +  G
Sbjct: 207 GCPPGYVAYNIFIGSICGG 225


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 201/420 (47%), Gaps = 11/420 (2%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L + H   TYN+++   C          +   M   G+ P+   +   ++      +   
Sbjct: 114 LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173

Query: 210 AKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           A  L+ Q     +RP  +T +T     L++ L   N A EAV +     +   QP+  T+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTT-----LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            +++ GL + G+   A      M +     D+V +NT+I  LC+   V     L KE++ 
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    P+VVTY+S+IS  C  G+   A+ + ++M    I P+ VTFN LID F K G  V
Sbjct: 289 KG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            AE + + M+     PD+ T++SL++G+C + +L++  ++ + M  K+  P+V T+  LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
              CK  R+ D     +++    LV     Y  +I G    G+ D A  +  +M      
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD +T++IL+ G C  G++ +A+ +F+ M +     D     ++I  + K G  ++ + +
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 178/355 (50%), Gaps = 9/355 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+S     SLLN         +AV +  +   +  +PDT TF  LI GL    +
Sbjct: 151 YEPSIVTLS-----SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M   GC P++VTY  +++GLC+  +      LL +++  ++   DVV + 
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME-AAKIEADVVIFN 264

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I   CK   +D A  ++ EM + GI+P+ VT++ LI      G    A  +   M+  
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P++VTF++LID + + G+  +  KL D+M  +++ P+++T+  L+N  C  +RL+ A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++  + +   D  P    YN +I GFCK+  V++   +  EM  +    D VT+T LI G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQRA 568
               G    A  +F +M+  G  PD +T + L+  L   G      E F  MQ++
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 187/379 (49%), Gaps = 1/379 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + D M   G  PN       V+   + G  D A  LL++    ++     ++N+++++L 
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  + D+A+ +FKE      +P+  T++ LI  L   G    A +   DM     +P++V
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+N LI    +  +     +L  ++  K    PD+ TY S+++G+C   ++DKA  ++  
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDM-IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S    P  VT+N LI GF K   +     +   M   G + D VT+++LI G   +G 
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   K+  +M    + P++ T++IL++ LC   +L  A      ++ +++    ++Y  
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G CKAG VD+   +   +  K  KP+ VT+  +I G C K  + EA ++  KM   G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570

Query: 538 CAPDDITVNSLISCLLKGG 556
             P+  T N+LI   L+ G
Sbjct: 571 PLPNSGTYNTLIRAHLRDG 589



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 200/416 (48%), Gaps = 7/416 (1%)

Query: 159 YNLVMRS-LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           Y  ++R+ L +M L D++ +    ++S    P   ++EF   +S+  +  K D    L  
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSR---PLPSIVEFNKLLSAIAKMKKFDVVISLGE 109

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + +  E+    + YN L+N   +++    A+ +  +  +L  +P   T + L+ G     
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A      M   G  PD +T+ TLI GL   N+ +    L+  +  +    P++VTY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTY 228

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             V++G CK G  D A  + N+M +  I+   V FN +ID   K  ++  A  + + M +
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+VVT+SSLI   C  G+ +   +L  +M  K ++PN+ TF  LI+A  KE +  +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +    +    + P  F YN +++GFC    +D+A  +   M  K C PD VT+  LI 
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G C   R+ +   +F +M   G   D +T  +LI  L   G  + A ++ ++   D
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ S C+ G  D    +   M+  G  PN       V+   + G+ + AKGL+ + 
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +S + YN L+N   ++    EA  + +E     + P   T+N L+ GL +  +V
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                 F DM     +PDIV++N+L+ G CR   ++    L  E+K + +  P V+TY +
Sbjct: 337 TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR-DLVPTVITYNT 395

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  G +D A  +  EM   G+ P   T+ +L++G  K+G +  A      MLS G
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD   +++ I G  +    +    + +EM      P+V T+ + ++ALC++    +A 
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEAC 515

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +  + L+P    Y  +I+GF K G++ +A  +  EM  K   P  VT+T+LI  H
Sbjct: 516 DLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAH 575

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             K  +  A   F+KML      + IT N++I+ L      +EA++      E
Sbjct: 576 AAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEE 628



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 165/348 (47%), Gaps = 36/348 (10%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD    N +++ L     + KA   +  M  FG  P +VTYNT++   C+   V +  EL
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E++ +  + P+ VTY  +++G  K G++++A G+  EM + G+  SA T+N LI+GF 
Sbjct: 238 LSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFC 296

Query: 379 KVGNMVSA----EYMRER-------------------------------MLSFGYLPDVV 403
           + G  V A    E M  R                               ML   + PD+V
Sbjct: 297 QKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIV 356

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           +F+SL+ GYCR G +++   L DE+K ++L P V T+  LI+ LC    L+ A R  K++
Sbjct: 357 SFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEM 416

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               L P  F Y  +++G  K G V  A     EM  K  KPD+  +   I+G       
Sbjct: 417 TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADT 476

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             A S+  +ML  G  PD IT N  +  L + G   EA  +++    D
Sbjct: 477 SVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 163/339 (48%), Gaps = 24/339 (7%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S F++ ++L+ LV  N+   A Y   E  R+ S       ++LI G      V      F
Sbjct: 118 SEFVFCAILDILVG-NDLMHAAYWVME--RVVSFEMHGVVDVLIAGHVXCLLV------F 168

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK----FKSEFS--PDVVTYTSV 338
             M   G  PD+   N       R+  V R   LL + K       +F   P VVTY ++
Sbjct: 169 DKMIRNGLLPDVKNCN-------RILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTM 221

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +  YCK G++D+A  + +EM   G  P+ VT+NVL++G  K G +  A+ + E ML+ G 
Sbjct: 222 LDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGL 281

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR- 457
                T++ LI+G+C+ G   +   L +EM  +   P + T+  L+  LCK  ++   R 
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRL 341

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           RF   LK +   P    +N ++ G+C+ G + EA ++  E++ +   P  +T+  LI G 
Sbjct: 342 RFSDMLK-SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           CM G +  A+ +  +M   G  PD  T   L++   K G
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG 439



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 138/297 (46%), Gaps = 1/297 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  D+   +   M   G  P+       V+ C + G    A+G  ++ 
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YN+ +   +K  +   A  M +E       PD  T+N+ +  L + G  
Sbjct: 452 LSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNF 511

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +   +M S G  PD VTY ++I+G  +   + +  E+  E+  K   +P VVTYT 
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG-VAPSVVTYTV 570

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +     +D A   +++M    +  + +T+N +I+G      M  A    + M   G
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            LP+  +++ LI+  C  G   + L+L  EM  + + P+ +T ++ +  L ++ +++
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 1/245 (0%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV     ++        + KA  +Y  M   GIKP+ VT+N ++D + K G +  A  +
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  P+ VT++ L++G  + G+L Q   L +EM    L+ + YT+  LIN  C+
Sbjct: 238 LSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQ 297

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +    +A   ++++      P    YN ++ G CK   V    +  ++M + +  PD V+
Sbjct: 298 KGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVS 357

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           F  L+ G+C  G + EA  +F+++      P  IT N+LI  L   G  + A R +++  
Sbjct: 358 FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALR-LKKEM 416

Query: 570 EDQNL 574
            DQ L
Sbjct: 417 TDQGL 421



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 13/205 (6%)

Query: 364 KPSAVTFNVLIDGFGKVGN--MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           K S   F  ++D    VGN  M +A ++ ER++SF  +  VV    LI G+         
Sbjct: 116 KESEFVFCAILDIL--VGNDLMHAAYWVMERVVSFE-MHGVV--DVLIAGHV------XC 164

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L + D+M    L P+V     ++  L  EN L+ A+     ++   + P    YN ++D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +CK G VD+A  +++EM+E+ C P+ VT+ +L+ G   KG + +A  +  +ML  G    
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQ 566
             T N LI+   + G+  EAF +++
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVE 309


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 205/407 (50%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN V+   C++   ++   V + M++ G LP+       + S     K   A  +L Q 
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y  L+ A + +   +EA+ + +E       PD +T+N +I+G+ + G V
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E    + S GC PD+++YN L+       +   G +L+ E+ F     P+ VTY+ 
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM-FSRGCEPNKVTYSI 327

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +IS  C+ G++D+A  +   M    + P   +++ LI    K G +  A  + + M+S G
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD+V +++++   C+NG  NQ L++ ++++G    PNV ++  +I+AL      + A 
Sbjct: 388 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 447

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  +    + P    YN +I   C+ G V+EA  ++ +ME+   +P  +++ I+++G 
Sbjct: 448 GMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 507

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C   R+ +AI +F +M+  GC P++ T   LI  +   G   EA  +
Sbjct: 508 CKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 193/409 (47%), Gaps = 38/409 (9%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           +++    SC +AGK + +   L        T    +   L+       N ++A  +  E 
Sbjct: 81  LMKLLNRSC-KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EI 138

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
              +++PD + +N +I G  ++ +++ A +    M + G  PDIVTYN +I  LC   ++
Sbjct: 139 LESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKL 198

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                +L ++   +   P V+TYT +I      G +++A  +  EM + G+ P   T+N 
Sbjct: 199 GLALTVLDQLLLDNCM-PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 257

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           +I G  K G +  A  +   + S G  PDV++++ L+  +   G+ ++G KL  EM  + 
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             PN  T++ILI++LC+  R+++A   LK +   +L P  + Y+P+I   CK G +D A 
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP------------ 540
            I+  M    C PD V +  ++   C  G   +A+ IFNK+  +GC P            
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437

Query: 541 -----------------------DDITVNSLISCLLKGGMPNEAFRIMQ 566
                                  D+IT NSLISCL + G+  EA  ++ 
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLD 486



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 175/359 (48%), Gaps = 5/359 (1%)

Query: 212 GLLSQFRPGEVTMSTFMYN---SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           G+ ++ RP  +    F       LLN   K    +E++Y  +        PD      LI
Sbjct: 61  GVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLI 120

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +G      ++KA      + S    PD+  YN +ISG C+VN++    ++L  +K +  F
Sbjct: 121 KGFFNFKNIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARG-F 178

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD+VTY  +I   C   K+  A  + +++      P+ +T+ +LI+     G +  A  
Sbjct: 179 LPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 238

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E ML+ G LPD+ T++++I G C+ G + +  +L   +  K   P+V ++ IL+ A  
Sbjct: 239 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFL 298

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
            + + ++  + + ++      P    Y+ +I   C+ G +DEA  ++  M EK   PD  
Sbjct: 299 NQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 358

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++  LI   C +GR+  AI I + M+  GC PD +  N++++ L K G  N+A  I  +
Sbjct: 359 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNK 417



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 138/276 (50%), Gaps = 1/276 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++R+    G  D  + +   M S G  PN       +SS  R G+ D A  +L   
Sbjct: 289 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM 348

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E+T  T+ Y+ L++AL K+   D A+ +          PD   +N ++  L + G  
Sbjct: 349 IEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNA 408

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F  +   GC P++ +YNT+IS L    + +R   ++  +  K    PD +TY S
Sbjct: 409 NQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG-IDPDEITYNS 467

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +IS  C+ G +++A G+ ++M   G +P+ +++N+++ G  KV  +  A  M   M+  G
Sbjct: 468 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 527

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
             P+  T+  LI+G    G   + ++L + +  +++
Sbjct: 528 CRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 563


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 210/422 (49%), Gaps = 11/422 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-----NSPMIEFFVSSCIRAGKCDA 209
           S   +  ++  + +M  +D V  +F+ M+  G  P     N  M    +SS      C  
Sbjct: 82  SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            K +   F P  VT     + SLLN     N  ++A+ +F +   +  +P+  T+  LI+
Sbjct: 142 GKMMKLGFEPDLVT-----FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L +   +  A E F  MG+ G  P++VTYN L++GLC +        LL+++  K    
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM-MKRRIE 255

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+V+T+T++I  + K+GK+ +A  +YN M    + P   T+  LI+G    G +  A  M
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  P+ V +++LI G+C++ ++  G+K+  EM  K +  N  T+T+LI   C 
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R + A+    Q+      P    YN ++DG C  G V++A +I   M ++    + VT
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +TI+I G C  G++ +A  +F  +   G  P+ IT  ++IS   + G+ +EA  + ++  
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495

Query: 570 ED 571
           ED
Sbjct: 496 ED 497



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 183/349 (52%), Gaps = 4/349 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +  LL+ + K N  D  + +F++   L   P   T NI++  +    +  +A  F   M 
Sbjct: 86  FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD+VT+ +L++G C  N +     L  ++     F P+VVTYT++I   CK   +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI-LGMGFKPNVVTYTTLIRCLCKNRHL 204

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A  ++N+M + G +P+ VT+N L+ G  ++G    A ++   M+     P+V+TF++L
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID + + G+L +  +L + M   ++ P+V+T+  LIN LC    L++AR+    ++ N  
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P   +Y  +I GFCK+  V++   I  EM +K    + +T+T+LI G+C+ GR   A  
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
           +FN+M      PD  T N L+  L   G   +A   F  M++   D N+
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 3/409 (0%)

Query: 155 SFKTYNLVMRS-LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           +F +Y  ++R+ L  +  +D++ + F  M     LP+       +S   +  + D    L
Sbjct: 47  AFSSYRKILRNGLHNLQFNDALDL-FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             Q +   +       N +++ +   +    A     +  +L  +PD  TF  L+ G   
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              ++ A   F  +   G  P++VTY TLI  LC+   +    EL  ++       P+VV
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-RPNVV 224

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++++G C++G+   A  +  +M    I+P+ +TF  LID F KVG ++ A+ +   M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +     PDV T+ SLI+G C  G L++  ++   M+     PN   +T LI+  CK  R+
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            D  +   ++    +V     Y  +I G+C  G  D A  +  +M  +R  PD  T+ +L
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           + G C  G++ +A+ IF  M +     + +T   +I  + K G   +AF
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 175/358 (48%), Gaps = 11/358 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++   C     +    +FD +   G  PN       +    +    + A  L +Q 
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214

Query: 218 -----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
                RP  VT     YN+L+  L +     +A ++ ++  +   +P+  TF  LI    
Sbjct: 215 GTNGSRPNVVT-----YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           ++G++ +A E +  M      PD+ TY +LI+GLC    +    ++   ++ ++   P+ 
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME-RNGCYPNE 328

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           V YT++I G+CK  +++    I+ EM+  G+  + +T+ VLI G+  VG    A+ +  +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S    PD+ T++ L+DG C NG++ + L + + M+ + +  N+ T+TI+I  +CK  +
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           + DA      L    + P    Y  +I GFC+ G + EA+ +  +M+E    P++  +
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 4/162 (2%)

Query: 414 RNG----QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           RNG    Q N  L L   M      P++  FT L++ + K NR +      +Q++   + 
Sbjct: 56  RNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P     N V+   C +     A+  + +M +   +PD VTFT L+ G+C   R+ +AI++
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           F+++L +G  P+ +T  +LI CL K    N A  +  +   +
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 204/414 (49%), Gaps = 11/414 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
           +N ++ SL     + +V  +F    S+G  P+   +   ++          A  +L+   
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
              + P  +T+     N+L+  L  +    +A+Y   +      Q +  ++  LI GL +
Sbjct: 126 KRGYHPNAITL-----NTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            GE K        +      PD+V YNT+I  LC+   +    +L  E+  K   SP+VV
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG-ISPNVV 239

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY +++ G+C +G + +A  + NEM    I P   TFN LID  GK G M +A+ +   M
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +     PDVVT++SLIDGY    ++     +   M    ++PNV T+T +I+ LCKE  +
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A    +++K+ +++P    Y  +IDG CK  +++ A  +  +M+E+  +PD  ++TIL
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   C  GR+  A   F ++L  G   +  T N +I+ L K  +  EA  +  +
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSK 473



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 198/410 (48%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N++M   C +        V   +   G+ PN+  +   +      G+   A     Q 
Sbjct: 100 TLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQV 159

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++   Y +L+N L K         + ++      +PD   +N +I  L +   +
Sbjct: 160 VAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLL 219

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + + +M   G SP++VTYN L+ G C +  +     LL E+K K+  +PDV T+ +
Sbjct: 220 GDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN-INPDVCTFNT 278

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I    K GKM  A  +   M    IKP  VT+N LIDG+  +  + +A+Y+   M   G
Sbjct: 279 LIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSG 338

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++++IDG C+   +++ + L +EMK KN+ P++ T+T LI+ LCK + L  A 
Sbjct: 339 VTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAI 398

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K++K   + P  + Y  ++D  CK G ++ A      +  K    +  T+ ++I G 
Sbjct: 399 ALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGL 458

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C      EA+ + +KM   GC PD IT  ++I  L +    ++A +I++ 
Sbjct: 459 CKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILRE 508



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 206/431 (47%), Gaps = 24/431 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++     +    + + VF  M   G  PN       +    +    D A  L  + 
Sbjct: 310 TYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM 369

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +      Y SL++ L K ++ + A+ + K+      QPD +++ IL+  L + G +
Sbjct: 370 KYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 429

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A EFF  +   G   ++ TYN +I+GLC+ +      +L  +++ K    PD +T+ +
Sbjct: 430 ENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM-PDAITFKT 488

Query: 338 VISGYCKLGKMDKATGIYNEMNSCG-----------------------IKPSAVTFNVLI 374
           +I    +  + DKA  I  EM + G                       IKP  VT+  L+
Sbjct: 489 IICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLM 548

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           DG+  V  +  A+Y+   M   G  P+V  ++ +IDG C+   +++ + L +EMK KN+ 
Sbjct: 549 DGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMF 608

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PN+ T+T LI+ALCK + L  A   LK++K + + P  + Y  ++DG CK+G ++ A  I
Sbjct: 609 PNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEI 668

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              +  K    +   +T +I   C  G   EA+ +  KM   GC PD +T + +I  L +
Sbjct: 669 FQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFE 728

Query: 555 GGMPNEAFRIM 565
               ++A +I+
Sbjct: 729 KDENDKAEKIL 739



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 194/419 (46%), Gaps = 22/419 (5%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K++ +S     +  + +TY  ++  LC+  + D    +F+ M+    +P+       +  
Sbjct: 328 KYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDG 387

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             +    + A  L  + +   +    + Y  LL+AL K    + A   F+         +
Sbjct: 388 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLN 447

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE--------- 311
             T+N++I GL +     +A +    M   GC PD +T+ T+I  L   +E         
Sbjct: 448 VQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILR 507

Query: 312 --VARGHELLKEVKFKSE-----------FSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
             +ARG +  ++V+ K               PDVVTY +++ GY  + ++  A  ++  M
Sbjct: 508 EMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM 567

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G+ P+   + ++IDG  K   +  A  + E M      P++VT++SLID  C+N  L
Sbjct: 568 AQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHL 627

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + + L  EMK   + P+VY++TIL++ LCK  RL  A+   ++L          +Y  +
Sbjct: 628 ERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAM 687

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           I+  CKAG  DEA  +  +ME+K C PD VTF I+I     K    +A  I  +M+  G
Sbjct: 688 INELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 211/473 (44%), Gaps = 60/473 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C MG       + + M+     P+       + +  + GK  AAK +L+  
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      YNSL++     N    A Y+F    +    P+  T+  +I GL +   V
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M      PDIVTY +LI GLC+ + + R   L K++K +    PDV +YT 
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK-EQGIQPDVYSYTI 418

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG------FGKVGNMVS------ 385
           ++   CK G+++ A   +  +   G   +  T+NV+I+G      FG+  ++ S      
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478

Query: 386 -----------------------AEYMRERMLSFGYL----------------------- 399
                                  AE +   M++ G                         
Sbjct: 479 CMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIK 538

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PDVVT+ +L+DGY    +L     +   M    ++PNV  +TI+I+ LCK+  +++A   
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            +++K  ++ P    Y  +ID  CK  +++ A  ++ EM+E   +PD  ++TIL+ G C 
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            GR+  A  IF ++L  G   +     ++I+ L K G+ +EA   +Q   ED+
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALD-LQXKMEDK 710



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 175/377 (46%), Gaps = 36/377 (9%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           TF +N +L++LV   +    + +FK++    + PD  T NIL+     +  +  AF    
Sbjct: 63  TFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLA 122

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           ++   G  P+ +T NTLI GLC   E+ +      +V  +  F  + V+Y ++I+G CK 
Sbjct: 123 NILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQG-FQLNQVSYRTLINGLCKT 181

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G+      +  ++    +KP  V +N +I    K   +  A  +   M+  G  P+VVT+
Sbjct: 182 GETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTY 241

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL-- 463
           ++L+ G+C  G L +   L +EMK KN++P+V TF  LI+AL KE ++  A+  L  +  
Sbjct: 242 NALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMK 301

Query: 464 --------KWNDLV-------------------------PKPFMYNPVIDGFCKAGNVDE 490
                    +N L+                         P    Y  +IDG CK   VDE
Sbjct: 302 ACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDE 361

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +  EM+ K   PD VT+T LI G C    +  AI++  KM   G  PD  +   L+ 
Sbjct: 362 AMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLD 421

Query: 551 CLLKGGMPNEAFRIMQR 567
            L KGG    A    QR
Sbjct: 422 ALCKGGRLENAKEFFQR 438



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 166/333 (49%), Gaps = 19/333 (5%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNH-SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           RL+N K   +F  F R+ +   H + +TYN+++  LC+  L      +   M   G +P+
Sbjct: 428 RLENAK---EF--FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPD 482

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           +   +  + +     + D A+ +L +           +   L  A  ++    EA  +  
Sbjct: 483 AITFKTIICALFEKDENDKAEKILREM----------IARGLQEA--RKVRLKEAKIVLA 530

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
              +   +PD  T+  L+ G   + E+K A   FY M   G +P++  Y  +I GLC+  
Sbjct: 531 VMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
            V     L +E+K K+ F P++VTYTS+I   CK   +++A  +  EM   GI+P   ++
Sbjct: 591 TVDEAMSLFEEMKHKNMF-PNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
            +L+DG  K G +  A+ + +R+L  GY  +V  ++++I+  C+ G  ++ L L  +M+ 
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           K   P+  TF I+I AL +++  + A + L ++
Sbjct: 710 KGCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 84/201 (41%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P    FN ++       +  +   + ++  S G  PD+ T + L++ +C    +     +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
              +  +   PN  T   LI  LC    +  A  F  Q+           Y  +I+G CK
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G       ++ ++E    KPD V +  +I   C    + +A  ++++M+  G +P+ +T
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 545 VNSLISCLLKGGMPNEAFRIM 565
            N+L+      G   EAF ++
Sbjct: 241 YNALVYGFCIMGHLKEAFSLL 261


>gi|302811221|ref|XP_002987300.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
 gi|300144935|gb|EFJ11615.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
          Length = 511

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 200/414 (48%), Gaps = 14/414 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           KT N+V+ SLC+ GL D    +   M   G  P++      +    +  K + A  L  +
Sbjct: 10  KTCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEK 69

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP--DTWTFNILIQGLSRI 274
                V    F YN LL+ L K     EA        R    P      +  LI GL ++
Sbjct: 70  MSRSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKV 129

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+   A   F  M      P  ++YN +I+   +        EL +E+K K    PD+ T
Sbjct: 130 GKYDHAMAVFRKMK----LPSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRV-PDIFT 184

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           + +VI    K GK  +A  I +EM      P+ +TF +L+ G  K    + AE + E M 
Sbjct: 185 FNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMD 244

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLS-PNVYTFTILINALCKEN 451
             G +PDVV  ++LI G+ + G+++   +L + M   G+  S PN+ TF I+I+ LCK N
Sbjct: 245 RVGCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKAN 304

Query: 452 RLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEA-NVIVAEMEEKRCKPDKVT 509
           ++ +A   +++++    + P  F +N +IDG  KAG+   A   +  EM    C PD VT
Sbjct: 305 KVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDSVT 364

Query: 510 FTILIIGHCMKGRMVEAISIFNKML--RIGCAPDDITVNSLISCLLKGGMPNEA 561
           FTIL+   C + R+ EA+ +  +M   + GCAPD ++ N+L+ CL   G   EA
Sbjct: 365 FTILVSESCKQRRIHEALELVEQMTKNKGGCAPDTLSFNALLGCLCCDGRLEEA 418



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 212/410 (51%), Gaps = 18/410 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRS-DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           TYN+++  LC+ G + ++ Q +   +R  +  + +  + E  +    + GK D A   ++
Sbjct: 81  TYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKVGKYDHA---MA 137

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            FR  ++  S+  YN ++ A VK+   + AV +F+E       PD +TFN +IQ LS+ G
Sbjct: 138 VFRKMKLP-SSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVIQSLSKAG 196

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + K+A +   +M    CSP+ +T+  L+ GLC+         +L EV  +    PDVV  
Sbjct: 197 KFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVL-EVMDRVGCVPDVVLL 255

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCG---IKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           T++ISG+ K G++D A+ ++  M S G    KP+  TFN++I G  K   +  A+ +  R
Sbjct: 256 TALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKANKVGEADALVRR 315

Query: 393 ML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLK-LCDEMKGKNLSPNVYTFTILINALCKE 450
           M    G  PD  TF+++IDG+ + G      K L  EM      P+  TFTIL++  CK+
Sbjct: 316 MEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDSVTFTILVSESCKQ 375

Query: 451 NRLNDARRFLKQLKWND--LVPKPFMYNPVIDGFCKAGNVDEANV-IVAEMEEKR-CKPD 506
            R+++A   ++Q+  N     P    +N ++   C  G ++EA      EM E+R C PD
Sbjct: 376 RRIHEALELVEQMTKNKGGCAPDTLSFNALLGCLCCDGRLEEAVAKFWGEMRERRECWPD 435

Query: 507 KVTFTILIIGHCMKGRMVE-AISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            VT   L++  C K R +E A  I ++ML  G  P     + L++ +  G
Sbjct: 436 AVTHA-LLVRQCCKQRNIELACRIVDEMLHRGFVPTPGIASMLVNLIQSG 484



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 146/286 (51%), Gaps = 14/286 (4%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M S  C  D+ T N ++  LC+   V    EL+  +  K  + PD VT  S++ G  K+ 
Sbjct: 1   MQSIAC-LDVKTCNIVVDSLCKGGLVDDAAELVHGMMDKGPY-PDTVTCNSLLDGLFKVN 58

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-----EYMRERMLSFGYLPD 401
           K++ A  +Y +M+   +K  A T+N+L+ G  K G +  A       +R+R     +   
Sbjct: 59  KVEHAMKLYEKMSRSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRH--- 115

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            + + +LI G C+ G+ +  + +  +MK     P+  ++ I+I A  K  R   A    +
Sbjct: 116 ELLYEALIGGLCKVGKYDHAMAVFRKMK----LPSSMSYNIVIAACVKRGRNEAAVELFR 171

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++K    VP  F +N VI    KAG   EA  IV EM   +C P+++TF +L+ G C   
Sbjct: 172 EMKVKKRVPDIFTFNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAK 231

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           R +EA S+   M R+GC PD + + +LIS  LK G  ++A R+ +R
Sbjct: 232 RALEAESVLEVMDRVGCVPDVVLLTALISGHLKEGRVDDASRLFER 277



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 151/317 (47%), Gaps = 10/317 (3%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  T NI++  L + G V  A E  + M   G  PD VT N+L+ GL +VN+V    +L 
Sbjct: 8   DVKTCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY 67

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP--SAVTFNVLIDGF 377
           +++  +S    D  TY  ++ G CK G++ +A    +        P    + +  LI G 
Sbjct: 68  EKMS-RSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGL 126

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            KVG    A  +  +M     LP  ++++ +I    + G+    ++L  EMK K   P++
Sbjct: 127 CKVGKYDHAMAVFRKM----KLPSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDI 182

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           +TF  +I +L K  +  +A   + ++ W    P    +  ++ G CKA    EA  ++  
Sbjct: 183 FTFNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEV 242

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG---CAPDDITVNSLISCLLK 554
           M+   C PD V  T LI GH  +GR+ +A  +F +ML  G     P+  T N +I  L K
Sbjct: 243 MDRVGCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCK 302

Query: 555 GGMPNEAFRIMQRASED 571
                EA  +++R  ++
Sbjct: 303 ANKVGEADALVRRMEDE 319



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 48/98 (48%)

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N V+D  CK G VD+A  +V  M +K   PD VT   L+ G     ++  A+ ++ KM R
Sbjct: 13  NIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSR 72

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
                D  T N L+  L KGG   EA + +  A  D+ 
Sbjct: 73  SFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDRE 110


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 195/393 (49%), Gaps = 2/393 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++ ++++  CE+G  D    V   M   G  PN  +    +  C + G  +  K L  + 
Sbjct: 153 SFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKM 212

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V  + + Y  L+N   K     + + ++++       P+ +T+N +I      G++
Sbjct: 213 GELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKL 272

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AFE F +M   G + ++VTYNTLI GLC+   V     L+  +K +   SP++++Y +
Sbjct: 273 NNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK-RDGLSPNLISYNT 331

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC +G +DKA+ ++N+M S G  PS  T+N+LI GF +  N      M   M + G
Sbjct: 332 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 391

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT++ L+D   R+  + +  ++   M+   L  ++Y + +LI+ LC    + +A 
Sbjct: 392 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 451

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  K L    L P   +YN +I G+CK G+   A  ++ EM E    P+  ++   I   
Sbjct: 452 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXIL 511

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           C   +  EA  +   M+ +G  P  I++ ++IS
Sbjct: 512 CKDEKWTEAEVLLKDMIELGLKP-SISIWNMIS 543



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 184/377 (48%), Gaps = 35/377 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+LL  L+K N  ++A  +F E  +   + D ++F I+I+G   +G + K FE    M 
Sbjct: 120 FNNLLILLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME 178

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK------------------FK----- 325
             G SP++V Y TLI G C+  ++ RG +L  ++                   FK     
Sbjct: 179 EMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKK 238

Query: 326 -----------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
                      +   P+V TY S+I   C  GK++ A  +++EM   G+  + VT+N LI
Sbjct: 239 DGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 298

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G  +   ++ AE +  RM   G  P+++++++LIDGYC  G L++   L ++MK    S
Sbjct: 299 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 358

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T+ ILI    +          +++++   L P    Y  ++D   ++ N+++A  I
Sbjct: 359 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQI 418

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + ME+     D   + +LI G C+ G M EA  +F  +  +   P+D+  N++I    K
Sbjct: 419 YSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCK 478

Query: 555 GGMPNEAFRIMQRASED 571
            G    A R+++   E+
Sbjct: 479 EGSSYRALRLLKEMGEN 495



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 183/346 (52%), Gaps = 5/346 (1%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
             ++ +++NA V+    ++A++   +       P + TFN L+  L +    +KA+  F 
Sbjct: 82  VLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 141

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +        D+ ++  +I G C V  + +G E+L +++ +   SP+VV YT++I G CK 
Sbjct: 142 ETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME-EMGLSPNVVVYTTLIDGCCKN 199

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G +++   ++ +M    +  +  T+ VLI+GF K+G       + E+M   G +P+V T+
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +S+I   C +G+LN   +L DEM+ + ++ NV T+  LI  LC+E R+ +A R + ++K 
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           + L P    YN +IDG+C  GN+D+A+ +  +M+     P   T+ ILI G         
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 379

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---MQRA 568
              +  +M   G +P  +T   L+  L++     +AF+I   M++A
Sbjct: 380 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKA 425



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 179/366 (48%), Gaps = 1/366 (0%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +  C   G  D    +L Q     ++ +  +Y +L++   K  + +    +F +   L
Sbjct: 156 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 215

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
               + +T+ +LI G  ++G  K   E +  M   G  P++ TYN++I   C   ++   
Sbjct: 216 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 275

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            EL  E++ +   + +VVTY ++I G C+  ++ +A  +   M   G+ P+ +++N LID
Sbjct: 276 FELFDEMRERG-VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLID 334

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G+  +GN+  A  +  +M S G  P + T++ LI G+           +  EM+ + LSP
Sbjct: 335 GYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP 394

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +  T+TIL++AL + + +  A +    ++   LV   ++Y  +I G C  G++ EA+ + 
Sbjct: 395 SKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLF 454

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             ++E   KP+ V +  +I G+C +G    A+ +  +M   G  P+  + NS I  L K 
Sbjct: 455 KSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKD 514

Query: 556 GMPNEA 561
               EA
Sbjct: 515 EKWTEA 520



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 36/324 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++    +MGL      +++ M+  G +PN       +  C   GK + A  L  + 
Sbjct: 223 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 282

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V  +   YN+L+  L ++    EA  +     R    P+  ++N LI G   IG +
Sbjct: 283 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNL 342

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT- 336
            KA   F  M S G SP + TYN LI+G       A   ++++E++ +   SP  VTYT 
Sbjct: 343 DKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG-LSPSKVTYTI 401

Query: 337 ----------------------------------SVISGYCKLGKMDKATGIYNEMNSCG 362
                                              +I G C +G M +A+ ++  ++   
Sbjct: 402 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 461

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +KP+ V +N +I G+ K G+   A  + + M   G +P+V +++S I   C++ +  +  
Sbjct: 462 LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAE 521

Query: 423 KLCDEMKGKNLSPNVYTFTILINA 446
            L  +M    L P++  + ++  A
Sbjct: 522 VLLKDMIELGLKPSISIWNMISKA 545


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 185/364 (50%), Gaps = 17/364 (4%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFK-----------EYFRLYS-----QPDTWTFNILI 268
           ST +YNS+LN+LV   +  +A ++ +           E  +L+       P++ TF+I+I
Sbjct: 272 STLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVI 331

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G++  A   F DM   GC PD++ YN LI GLC  N +     LL+E++ +S  
Sbjct: 332 NGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEME-ESGI 390

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P   T   +    C+   +  A  +  +M   G  P       L+    K G  V A  
Sbjct: 391 EPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACK 450

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
               M   G+ PD+V +S+ +DG  +  +++Q LKL  ++  +   P+V  + ILI  LC
Sbjct: 451 FLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLC 510

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+ +A+  L +++   LVP    YN +IDG CK  +++EA + ++ M EK  +P+ +
Sbjct: 511 KTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVI 570

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T++ LI G C  GR  +A+ ++N+M R GC P  I   + I  L   G PNEA   ++  
Sbjct: 571 TYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREM 630

Query: 569 SEDQ 572
            E +
Sbjct: 631 EERE 634



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 11/286 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAKGLLSQ 216
           T N +   LC          +   MR  GH+P        V    + GK  +A K L+  
Sbjct: 396 TNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDM 455

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G        Y++ L+ L+K    D+A+ +F++       PD   +NILI+GL +   
Sbjct: 456 AEEG-FQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQR 514

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A    ++M   G  P  VTYNTLI GLC+ + +     L   +  + E  P+V+TY+
Sbjct: 515 IAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAM-LFLSMMIEKEREPNVITYS 573

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN----MVSAEYMRER 392
           ++I+G C  G+ D A  ++NEM   G  PS++ +   I G    G     +V    M ER
Sbjct: 574 TLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEER 633

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
            +     PD   +  L++ +  +       ++  EM  K   P+++
Sbjct: 634 EMK----PDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLH 675



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 24/330 (7%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+++++  L++ LS+   +        +M   G   D  T   ++   C + E  +  ++
Sbjct: 64  PNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDV 123

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             E+  +     D   ++ ++  + K GK+DKA  +   M    ++ +  TF  LI GF 
Sbjct: 124 FNEIHDRGWV--DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFV 181

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   +  A ++ ++M   G+ PD+  +  +I G C N  + + L L  EMKG  + P+V 
Sbjct: 182 KESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVK 241

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKP--FMYNPVIDGFCKAGNVDEANVIVA 496
             T LI++  KE  L     F +++   D+ PK    +YN V++     G+V +A  ++ 
Sbjct: 242 IVTKLISSFSKEEELT---CFFEEMH-EDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQ 297

Query: 497 EMEEKRC----------------KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            +    C                 P+  TF+I+I G    G +  A+ +F  M RIGC P
Sbjct: 298 AITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKP 357

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D +  N+LI  L       E+  ++Q   E
Sbjct: 358 DLLLYNNLIDGLCTSNRLQESCGLLQEMEE 387


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 201/420 (47%), Gaps = 11/420 (2%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L + H   TYN+++   C          +   M   G+ P+   +   ++      +   
Sbjct: 76  LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 135

Query: 210 AKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           A  L+ Q     +RP  +T +T     L++ L   N A EAV +     +   QP+  T+
Sbjct: 136 AVALVDQMVEMGYRPDTITFTT-----LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 190

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            +++ GL + G+   A      M +     D+V +NT+I  LC+   V     L KE++ 
Sbjct: 191 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 250

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    P+VVTY+S+IS  C  G+   A+ + ++M    I P+ VTFN LID F K G  V
Sbjct: 251 KG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 309

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            AE + + M+     PD+ T++SL++G+C + +L++  ++ + M  K+  P+V T+  LI
Sbjct: 310 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
              CK  R+ D     +++    LV     Y  +I G    G+ D A  +  +M      
Sbjct: 370 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 429

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD +T++IL+ G C  G++ +A+ +F+ M +     D     ++I  + K G  ++ + +
Sbjct: 430 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 489



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 178/355 (50%), Gaps = 9/355 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+S     SLLN         +AV +  +   +  +PDT TF  LI GL    +
Sbjct: 113 YEPSIVTLS-----SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 167

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M   GC P++VTY  +++GLC+  +      LL +++  ++   DVV + 
Sbjct: 168 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME-AAKIEADVVIFN 226

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I   CK   +D A  ++ EM + GI+P+ VT++ LI      G    A  +   M+  
Sbjct: 227 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 286

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P++VTF++LID + + G+  +  KL D+M  +++ P+++T+  L+N  C  +RL+ A
Sbjct: 287 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 346

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++  + +   D  P    YN +I GFCK+  V++   +  EM  +    D VT+T LI G
Sbjct: 347 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 406

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQRA 568
               G    A  +F +M+  G  PD +T + L+  L   G      E F  MQ++
Sbjct: 407 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 461



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 187/379 (49%), Gaps = 1/379 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + D M   G  PN       V+   + G  D A  LL++    ++     ++N+++++L 
Sbjct: 174 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 233

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  + D+A+ +FKE      +P+  T++ LI  L   G    A +   DM     +P++V
Sbjct: 234 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 293

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+N LI    +  +     +L  ++  K    PD+ TY S+++G+C   ++DKA  ++  
Sbjct: 294 TFNALIDAFVKEGKFVEAEKLYDDM-IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 352

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S    P  VT+N LI GF K   +     +   M   G + D VT+++LI G   +G 
Sbjct: 353 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 412

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   K+  +M    + P++ T++IL++ LC   +L  A      ++ +++    ++Y  
Sbjct: 413 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 472

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G CKAG VD+   +   +  K  KP+ VT+  +I G C K  + EA ++  KM   G
Sbjct: 473 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 532

Query: 538 CAPDDITVNSLISCLLKGG 556
             P+  T N+LI   L+ G
Sbjct: 533 PLPNSGTYNTLIRAHLRDG 551



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 200/416 (48%), Gaps = 7/416 (1%)

Query: 159 YNLVMRS-LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           Y  ++R+ L +M L D++ +    ++S    P   ++EF   +S+  +  K D    L  
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSR---PLPSIVEFNKLLSAIAKMKKFDVVISLGE 71

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + +  E+    + YN L+N   +++    A+ +  +  +L  +P   T + L+ G     
Sbjct: 72  KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 131

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A      M   G  PD +T+ TLI GL   N+ +    L+  +  +    P++VTY
Sbjct: 132 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTY 190

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             V++G CK G  D A  + N+M +  I+   V FN +ID   K  ++  A  + + M +
Sbjct: 191 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 250

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+VVT+SSLI   C  G+ +   +L  +M  K ++PN+ TF  LI+A  KE +  +
Sbjct: 251 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 310

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +    +    + P  F YN +++GFC    +D+A  +   M  K C PD VT+  LI 
Sbjct: 311 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 370

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G C   R+ +   +F +M   G   D +T  +LI  L   G  + A ++ ++   D
Sbjct: 371 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 426


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 196/403 (48%), Gaps = 6/403 (1%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           +LC+MG ++    +F  M++ G  PN       +S    +G    A GL  +     V  
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFP 388

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  YN+L+N LV+      A  +     R    P+  T+N +I+G   +G+ KKA    
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G S ++VTYNT+I G C          +L  ++      PD  +YT +I G+CK
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR-DGGCKPDEWSYTELICGFCK 507

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           + KM+ A G++NEM   G+ P+ VT+  LIDG+ K   + +A  + E M   G  P+V T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++ LI G  +    +   +LC  M  + + PNV T+T +I+ LCK    + A     ++ 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
               +P    Y+ +I    + G V+EA  + AE+E     PD++T+  +I  + M G++ 
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            A +   +M++ GC P   T   LI      G+ NE     QR
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIK-----GLKNEYLLADQR 725



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 200/413 (48%), Gaps = 7/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS---DGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           TY+ ++  LC+ G    V   FD +R     G LP +      + +    G  + A  L 
Sbjct: 287 TYSTLINGLCDSG---RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF 343

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              +      + + Y +L++ L        A+ +F    R    P+T T+N LI  L   
Sbjct: 344 VDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +K AF     MG  GCSP+IVTYN +I G C + +  +   ++  +  +   S ++VT
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVT 462

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I GYC  G    A  I + M   G KP   ++  LI GF K+  M SA  +   M+
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+ VT+++LIDGYC++ +L+    L + MK     PNV T+ +LI+ L K+N  +
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    K +    + P    Y  +IDG CK G+   A  +  +M E+ C P+ +T++ LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
                +G++ EA ++F ++ R G  PD+IT   +I   +  G    AF  + R
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 216/473 (45%), Gaps = 69/473 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++  L  +G+  +V   +  M S+G  PN  +    +++  + G    A+ ++ + 
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E++  TF Y S++    ++++ D A+ +F +  +   +P+T T++ LI GL   G V
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 278 KKAFE-----------------------------------FFYDMGSFGCSPDIVTYNTL 302
            +AF+                                    F DM + GC P++ TY  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 303 ISGLC--RVNEVARG--HE-------------------LLKEVKFKSEF----------- 328
           ISGLC   + +VA G  H                    L++  + K  F           
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP++VTY  +I GYC LG   KA  + N M   G   + VT+N +I G+   GN  SA  
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G  PD  +++ LI G+C+  ++     L +EM    L PN  T+T LI+  C
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ +L+ A   L+ +K +   P    YN +I G  K  N   A  +   M E+   P+ V
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           T+T +I G C  G    A+ +FNKM+  GC P+ +T +SLI  L + G   EA
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 5/334 (1%)

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDT----WTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+K  ++ EA+     +  + SQ       + ++ L+  LSR+G      + ++ M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P+++ YN +I+ LC+   VA    ++K+V F+SE SPD  TYTS+I G+C+   +D A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKV-FESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++N+M   G +P+ VT++ LI+G    G +  A  +   M+  G LP   T +  I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C  G      +L  +MK K   PNVYT+T LI+ LC    L  A     ++  + + P 
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I+   +   +  A V++  M    C P+ VT+  +I G+C+ G   +A+ + N
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            ML+ G + + +T N++I      G    A RI+
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 182/471 (38%), Gaps = 63/471 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C +G      +V + M   GH  N       +     +G   +A  +L   
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G      + Y  L+    K +  + A  +F E       P+  T+  LI G  +  ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A      M   GC P++ TYN LI GL + N  +   EL K V  +    P+VVTYT+
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK-VMIEEGIFPNVVTYTA 605

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G    A  ++N+M   G  P+ +T++ LI   G+ G +  AE +   +   G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665

Query: 398 YLPDVVTFSSLIDGYCRNGQ-------------------------LNQGLK----LCDE- 427
            +PD +T+  +I+ Y  +G+                         L +GLK    L D+ 
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725

Query: 428 ---------------------------MKGKNLSP--NVYTFTILINALCKENRLNDARR 458
                                       K   L P  +V     L++ L    R  +A  
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANE 785

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L  +    L P    YN ++    +  NVD A  +   M  + C+     +  LI   C
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQ 566
              R  EA   F  ML     PDD+    LI  LL+ G  +   E   IM+
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 144/357 (40%), Gaps = 12/357 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN+++  L +       + +   M  +G  PN       +    + G    A  + ++
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y+SL+ AL ++   +EA  +F E  R    PD  T+  +I+     G+
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V+ AF F   M   GC P + TY  LI GL       +   LL + +  +   PDVV   
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-------KNEYLLADQRLAA--LPDVVPNC 736

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S   GY +    D  + +  ++       S    N L+      G    A  +   M+S 
Sbjct: 737 SF--GY-QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD   ++SL+    R   ++  + +   M  +    ++  +  LI ALC+ +R  +A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           R   + +      P   +   +IDG  + G  D     +  ME +R  P    +TIL
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 120/317 (37%), Gaps = 25/317 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+ G       +F+ M   G LPN       + +  + GK + A+ L ++ 
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL------ 271
               +      Y  ++ A +     + A        +   QP  WT+ +LI+GL      
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 721

Query: 272 -----SRIGEVKKAFEFFYD-------------MGSFGCSPDIVTYNTLISGLCRVNEVA 313
                + + +V     F Y              +        +   N L+S L       
Sbjct: 722 ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
             +ELL  +       PD   Y S++    ++  +D A G++  M++ G +     +  L
Sbjct: 782 EANELLGSM-ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I    ++     A    E ML   + PD V  + LIDG  R+G  +  ++    M+ +  
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 900

Query: 434 SPNVYTFTILINALCKE 450
            P+ + +TIL     K+
Sbjct: 901 MPSFHIYTILAREASKK 917


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 196/403 (48%), Gaps = 6/403 (1%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           +LC+MG ++    +F  M++ G  PN       +S    +G    A GL  +     V  
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  YN+L+N LV+      A  +     R    P+  T+N +I+G   +G+ KKA    
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G S ++VTYNT+I G C          +L  ++      PD  +YT +I G+CK
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR-DGGCKPDEWSYTELICGFCK 507

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           + KM+ A G++NEM   G+ P+ VT+  LIDG+ K   + +A  + E M   G  P+V T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++ LI G  +    +   +LC  M  + + PNV T+T +I+ LCK    + A     ++ 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
               +P    Y+ +I    + G V+EA  + AE+E     PD++T+  +I  + M G++ 
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            A +   +M++ GC P   T   LI      G+ NE     QR
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIK-----GLKNEYLLADQR 725



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 200/413 (48%), Gaps = 7/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS---DGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           TY+ ++  LC+ G    V   FD +R     G LP +      + +    G  + A  L 
Sbjct: 287 TYSTLINGLCDSG---RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF 343

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              +      + + Y +L++ L        A+ +F    R    P+T T+N LI  L   
Sbjct: 344 VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +K AF     MG  GCSP+IVTYN +I G C + +  +   ++  +  +   S ++VT
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVT 462

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I GYC  G    A  I + M   G KP   ++  LI GF K+  M SA  +   M+
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+ VT+++LIDGYC++ +L+    L + MK     PNV T+ +LI+ L K+N  +
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    K +    + P    Y  +IDG CK G+   A  +  +M E+ C P+ +T++ LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
                +G++ EA ++F ++ R G  PD+IT   +I   +  G    AF  + R
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 215/473 (45%), Gaps = 69/473 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++  L  +G+  +V   +  M S+G  PN  +    +++  + G    A+ ++ + 
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E++  TF Y S++    ++++ D A+ +F +  +   +P+T T++ LI GL   G V
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 278 KKAFE-----------------------------------FFYDMGSFGCSPDIVTYNTL 302
            +AF+                                    F DM + GC P++ TY  L
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 303 ISGLCRVN--EVARG--HE-------------------LLKEVKFKSEF----------- 328
           ISGLC     +VA G  H                    L++  + K  F           
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP++VTY  +I GYC LG   KA  + N M   G   + VT+N +I G+   GN  SA  
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G  PD  +++ LI G+C+  ++     L +EM    L PN  T+T LI+  C
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ +L+ A   L+ +K +   P    YN +I G  K  N   A  +   M E+   P+ V
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           T+T +I G C  G    A+ +FNKM+  GC P+ +T +SLI  L + G   EA
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 5/334 (1%)

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDT----WTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+K  ++ EA+     +  + SQ       + ++ L+  LSR+G      + ++ M S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P+++ YN +I+ LC+   VA    ++K+V F+SE SPD  TYTS+I G+C+   +D A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKV-FESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++N+M   G +P+ VT++ LI+G    G +  A  +   M+  G LP   T +  I  
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C  G      +L  +MK K   PNVYT+T LI+ LC    L  A     ++  + + P 
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I+   +   +  A V++  M    C P+ VT+  +I G+C+ G   +A+ + N
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            ML+ G + + +T N++I      G    A RI+
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 182/471 (38%), Gaps = 63/471 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C +G      +V + M   GH  N       +     +G   +A  +L   
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G      + Y  L+    K +  + A  +F E       P+  T+  LI G  +  ++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A      M   GC P++ TYN LI GL + N  +   EL K V  +    P+VVTYT+
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK-VMIEEGIFPNVVTYTA 605

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G    A  ++N+M   G  P+ +T++ LI   G+ G +  AE +   +   G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665

Query: 398 YLPDVVTFSSLIDGYCRNGQ-------------------------LNQGLK----LCDE- 427
            +PD +T+  +I+ Y  +G+                         L +GLK    L D+ 
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725

Query: 428 ---------------------------MKGKNLSP--NVYTFTILINALCKENRLNDARR 458
                                       K   L P  +V     L++ L    R  +A  
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANE 785

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L  +    L P    YN ++    +  NVD A  +   M  + C+     +  LI   C
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQ 566
              R  EA   F  ML     PDD+    LI  LL+ G  +   E   IM+
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 896



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 144/357 (40%), Gaps = 12/357 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN+++  L +       + +   M  +G  PN       +    + G    A  + ++
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y+SL+ AL ++   +EA  +F E  R    PD  T+  +I+     G+
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V+ AF F   M   GC P + TY  LI GL       +   LL + +  +   PDVV   
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-------KNEYLLADQRLAA--LPDVVPNC 736

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S   GY +    D  + +  ++       S    N L+      G    A  +   M+S 
Sbjct: 737 SF--GY-QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 793

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD   ++SL+    R   ++  + +   M  +    ++  +  LI ALC+ +R  +A
Sbjct: 794 GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 853

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           R   + +      P   +   +IDG  + G  D     +  ME +R  P    +TIL
Sbjct: 854 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 120/317 (37%), Gaps = 25/317 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+ G       +F+ M   G LPN       + +  + GK + A+ L ++ 
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL------ 271
               +      Y  ++ A +     + A        +   QP  WT+ +LI+GL      
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 721

Query: 272 -----SRIGEVKKAFEFFYD-------------MGSFGCSPDIVTYNTLISGLCRVNEVA 313
                + + +V     F Y              +        +   N L+S L       
Sbjct: 722 ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
             +ELL  +       PD   Y S++    ++  +D A G++  M++ G +     +  L
Sbjct: 782 EANELLGSM-ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I    ++     A    E ML   + PD V  + LIDG  R+G  +  ++    M+ +  
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 900

Query: 434 SPNVYTFTILINALCKE 450
            P+ + +TIL     K+
Sbjct: 901 MPSFHIYTILAREASKK 917


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 182/343 (53%), Gaps = 2/343 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +  +L  LVK  +   A+ + ++      +P+  T NILI     +G++  +F     + 
Sbjct: 68  FGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKIL 127

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD +T NTL+ GLC   EV R      +V     F  + V+Y ++++G CK+G+ 
Sbjct: 128 KLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKV-VAQGFQMNQVSYGTLLNGLCKIGET 186

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  +   +     +P  V ++ +IDG  K   +  A      M + G  P+V+T+S+L
Sbjct: 187 RCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTL 246

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G+C  GQL     L +EM  KN++PNVYT+ ILI+ALCKE ++ +A++ L ++     
Sbjct: 247 IWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQ 306

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                 YN V+DG CK+ N+D+A  +  +M++   +P+K T+T LI G C  GR+  A  
Sbjct: 307 PADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQK 366

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +F  +L  GC  D  T N +IS L K GM ++A   M+   ED
Sbjct: 367 LFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALA-MKSKMED 408



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 198/383 (51%), Gaps = 7/383 (1%)

Query: 187 HLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           H P  P+IEF   +   ++      A  L  Q     +  +    N L+N          
Sbjct: 61  HTP--PIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAF 118

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           +  +  +  +L  QPDT T N L++GL   GEVK++  F   + + G   + V+Y TL++
Sbjct: 119 SFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLN 178

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC++ E     +LL+ ++ +S   PDVV Y+++I G CK   +++A   ++EMN+ GI 
Sbjct: 179 GLCKIGETRCAVKLLRMIEDRST-RPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIF 237

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ +T++ LI GF   G ++ A  +   M+     P+V T++ LID  C+ G++ +  KL
Sbjct: 238 PNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKL 297

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARR-FLKQLKWNDLVPKPFMYNPVIDGFC 483
             EM  K    +V T+  +++ LCK   L+ A   F+K  KW  + P  + Y  +IDG C
Sbjct: 298 LAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG-IQPNKYTYTALIDGLC 356

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G +  A  +   +  K C  D  T+ ++I G C +G   +A+++ +KM   GC P+ +
Sbjct: 357 KGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAV 416

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
           T + +I  L +    ++A +++ 
Sbjct: 417 TFDIIIRSLFEKDENDKAEKLLH 439



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 164/344 (47%), Gaps = 1/344 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++   C +G       V   +   G+ P++  +   +      G+   +     + 
Sbjct: 102 TLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKV 161

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 M+   Y +LLN L K      AV + +      ++PD   ++ +I GL +   V
Sbjct: 162 VAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIV 221

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++FF +M + G  P+++TY+TLI G C   ++     LL E+  K+  +P+V TY  
Sbjct: 222 NQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKN-INPNVYTYNI 280

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK GK+ +A  +  EM+  G     VT+N ++DG  K  N+  A  +  +M  +G
Sbjct: 281 LIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG 340

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+  T+++LIDG C+ G+L    KL   +  K    +V T+ ++I+ LCKE   + A 
Sbjct: 341 IQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKAL 400

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
               +++ N  +P    ++ +I    +    D+A  ++  M  K
Sbjct: 401 AMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAK 444



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++  LC+  + +     F  M + G  PN       +     AG+   A  LL++  
Sbjct: 208 YSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMI 267

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + YN L++AL K+    EA  +  E        D  T+N ++ GL +   + 
Sbjct: 268 LKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLD 327

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA   F  M  +G  P+  TY  LI GLC+   +    +L + +  K     DV TY  +
Sbjct: 328 KATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKG-CCIDVRTYNVM 386

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ISG CK G  DKA  + ++M   G  P+AVTF+++I    +      AE +   M++ G 
Sbjct: 387 ISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446

Query: 399 L 399
           L
Sbjct: 447 L 447



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 1/276 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC++G       +   +      P+  M    +    +    + A    S+ 
Sbjct: 172 SYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM 231

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y++L+           A  +  E       P+ +T+NILI  L + G+V
Sbjct: 232 NARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKV 291

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A +   +M   G   D+VTYN+++ GLC+   + +   L  ++K K    P+  TYT+
Sbjct: 292 KEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMK-KWGIQPNKYTYTA 350

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G++  A  ++  +   G      T+NV+I G  K G    A  M+ +M   G
Sbjct: 351 LIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNG 410

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +P+ VTF  +I       + ++  KL   M  K L
Sbjct: 411 CIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           EN ++D      +L      P    +  ++    K  +   A  +  +ME K  +P+ VT
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL-LKG 555
             ILI   C  G+M  + S+  K+L++G  PD IT+N+L+  L LKG
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKG 149



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 68/140 (48%), Gaps = 1/140 (0%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P +  F  ++  L K      A    +Q++   + P     N +I+ FC  G +  +  
Sbjct: 62  TPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFS 121

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ ++ +   +PD +T   L+ G C+KG +  ++   +K++  G   + ++  +L++ L 
Sbjct: 122 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLC 181

Query: 554 KGGMPNEAFRIMQRASEDQN 573
           K G    A +++ R  ED++
Sbjct: 182 KIGETRCAVKLL-RMIEDRS 200


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 208/416 (50%), Gaps = 2/416 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           GLK +E +R       +   YN+++   C  G      ++   M + G LP        +
Sbjct: 278 GLKLIE-ARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLM 336

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           S   R G  +    LLS+ R   +  +  +YNS+++AL K  +A +A+ + K+ F     
Sbjct: 337 SWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCD 396

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  TF+ LI GL + G V++A     +   +  +P++ +Y +LI G C   EV     L
Sbjct: 397 PDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNL 456

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E+  +   +PDVVT+ ++I G    G++ +A  +  +M +  + P A  +NVLI G  
Sbjct: 457 LVEMMERGH-TPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLC 515

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   + +A  + E ML     PD   +++LIDG+ RN  L++  K+ + M+ K + P+V 
Sbjct: 516 KKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVV 575

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +I   C+   +N+A   +  ++    +P  F Y  +I G+ K GN+  A  ++ +M
Sbjct: 576 GYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDM 635

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            ++RC+P+ V ++ LI G+C  G    A  +F  M   G  P+ IT   LI  L K
Sbjct: 636 MKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFK 691



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 198/401 (49%), Gaps = 1/401 (0%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           +++R LC  GL +    + +     G +PN+      +    R G       LL +    
Sbjct: 264 VMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAK 323

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
            +  +   Y +L++ L ++ + ++   +  E       P+   +N +I  L +     +A
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
                 M + GC PD +T++TLISGLC+   V     LL+E   + E +P++ +YTS+I 
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETT-RWELNPNLSSYTSLIH 442

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G+C  G++  A+ +  EM   G  P  VTF  LI G    G +  A  +RE+M +   LP
Sbjct: 443 GFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLP 502

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D   ++ LI G C+   L     L +EM  +N+ P+ Y +T LI+   +   L++AR+  
Sbjct: 503 DANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIF 562

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           + ++   + P    YN +I G+C+ G ++EA   ++ M +    PD+ T+T LI G+  +
Sbjct: 563 EFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQ 622

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           G +  A+S+   M++  C P+ +  +SLI+   K G  + A
Sbjct: 623 GNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAA 663



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 176/337 (52%), Gaps = 1/337 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN L++   ++ +    + +  E       P   T+  L+  L R G+++K      +M 
Sbjct: 297 YNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMR 356

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                P++  YN++I  LC+    ++   +LK++ F     PD +T++++ISG C+ G++
Sbjct: 357 ERRLPPNVQIYNSVIDALCKCRSASQALVVLKQM-FAGGCDPDAITFSTLISGLCQEGRV 415

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  +  E     + P+  ++  LI GF   G ++ A  +   M+  G+ PDVVTF +L
Sbjct: 416 QEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGAL 475

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G    GQ+++ L + ++M  + L P+   + +LI+ LCK+  L  AR  ++++   ++
Sbjct: 476 IHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNV 535

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  ++Y  +IDGF +  ++DEA  I   ME+K   PD V +  +I G+C  G M EA+ 
Sbjct: 536 HPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVE 595

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             + M ++G  PD+ T  +LI    K G  + A  ++
Sbjct: 596 CMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 198/474 (41%), Gaps = 49/474 (10%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + YN V+ +LC+        VV   M + G  P++      +S   + G+   A+ LL +
Sbjct: 365 QIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRE 424

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               E+  +   Y SL++    +     A  +  E       PD  TF  LI GL   G+
Sbjct: 425 TTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQ 484

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-------------- 322
           V +A      M +    PD   YN LISGLC+   +     L++E+              
Sbjct: 485 VSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTT 544

Query: 323 ------------------KFKSE--FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                             +F  +    PDVV Y ++I GYC+ G M++A    + M   G
Sbjct: 545 LIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVG 604

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P   T+  LI G+ K GN+  A  +   M+     P+VV +SSLI+GYC+ G  +   
Sbjct: 605 RIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAE 664

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L   M+ + L PNV T+TILI +L K++++  A  + + +  N   P  +  + ++ G 
Sbjct: 665 CLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGL 724

Query: 483 CKA-GNVDEANV--------------IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           C +  ++  ++               I   +   RC P    +  +I   C+   + EA+
Sbjct: 725 CNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEAL 784

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKK 581
            + NKM   G  PD  T  SL+      G   E   I+    +   L++ S  K
Sbjct: 785 DLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYK 838



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 39/274 (14%)

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIK---PSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +++++    + G+ D       +M+  G     P+      L+  +   G    A  M +
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 392 RMLSF-GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           R     G LP     + L+       + +   KL DEM  +    + Y+  +++  LC E
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             +    + ++       VP    YN +IDG+C+ G+V    +++ EME K   P  VT+
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 511 TILIIGHCMKGRM-----------------------------------VEAISIFNKMLR 535
             L+     KG +                                    +A+ +  +M  
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            GC PD IT ++LIS L + G   EA R+++  +
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETT 426


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 199/405 (49%), Gaps = 7/405 (1%)

Query: 148  VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRA 204
            + LS   S  TYN ++  L   G    V+ V+D    M ++G +P        +   +++
Sbjct: 1182 MRLSKKASSFTYNPLITGLLARG---CVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQS 1238

Query: 205  GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
            G  +AA+   ++ R   +      YNSLLN   K  N  EA+ +F +  R    P   T+
Sbjct: 1239 GLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTY 1298

Query: 265  NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            NILI G  R+G++++A     +MG  GC P++ TY  L+ G   V  +A   E   E+  
Sbjct: 1299 NILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLS 1358

Query: 325  KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
            K    PD   Y + I     LG + +A  +   +   GI    VT+N+LI G  K GN+ 
Sbjct: 1359 KG-LQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLK 1417

Query: 385  SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
             A+ ++ +M+S G  PD +T++ LI  +C  G L +  K+ + M    L P+  TFT++I
Sbjct: 1418 DAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVII 1477

Query: 445  NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
            +A C+   L  A  + +++    + P    YN +I   C+ G    A+    EM E+   
Sbjct: 1478 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLV 1537

Query: 505  PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             +K T+T+LI G+C  G   +A+  + +M + G  PD +T  +L+
Sbjct: 1538 ANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 210/425 (49%), Gaps = 20/425 (4%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            K  N V+R L +    D +  V + M   G  P+       + S ++ G+ D    LL +
Sbjct: 1085 KDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKE 1144

Query: 217  FR-------PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
                     P +VT     YN ++  L ++ + +EA  +  E  RL  +  ++T+N LI 
Sbjct: 1145 METRGSGCLPNDVT-----YNVVITGLTRKGDLEEAAELV-EGMRLSKKASSFTYNPLIT 1198

Query: 270  GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            GL   G VKK ++   +M + G  P +VTYN +I GL +   V        E++      
Sbjct: 1199 GLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMG-LL 1257

Query: 330  PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            PDV+TY S+++GYCK G + +A  ++ ++   G+ P+ +T+N+LIDG+ ++G++  A  +
Sbjct: 1258 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARIL 1317

Query: 390  RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            +E M   G LP+V T++ L+ G      L    +  DEM  K L P+ + +   I   C 
Sbjct: 1318 KEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI---CA 1374

Query: 450  ENRLND-ARRF-LKQ-LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            E  L D AR F L++ L    +      YN +I G CK GN+ +A  +  +M     +PD
Sbjct: 1375 ELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434

Query: 507  KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             +T+T LI  HC +G + EA  IFN M+  G  P  +T   +I    + G    A+   +
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494

Query: 567  RASED 571
            +  E+
Sbjct: 1495 KMLEE 1499



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 199/411 (48%), Gaps = 4/411 (0%)

Query: 148  VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM--RSDGHLPNSPMIEFFVSSCIRAG 205
            + L +  S  TYN ++ S  + G  D V ++   M  R  G LPN       ++   R G
Sbjct: 1111 LELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKG 1170

Query: 206  KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
              + A  L+   R  +   S+F YN L+  L+ +    +   +  E       P   T+N
Sbjct: 1171 DLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 1229

Query: 266  ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
             +I GL + G V+ A   F +M + G  PD++TYN+L++G C+   +     L  +++ +
Sbjct: 1230 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR-R 1288

Query: 326  SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
            +  +P V+TY  +I GYC+LG +++A  +  EM   G  P+  T+ +L+ G   V ++  
Sbjct: 1289 AGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAM 1348

Query: 386  AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
            A    + MLS G  PD   +++ I      G + +  +L + +  + +S +  T+ ILI+
Sbjct: 1349 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIH 1408

Query: 446  ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             LCK   L DA+    ++  N L P    Y  +I   C+ G + EA  I   M      P
Sbjct: 1409 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 1468

Query: 506  DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
              VTFT++I  +C +G +  A   F KML  G  P++IT N LI  L + G
Sbjct: 1469 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 1519



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 177/374 (47%), Gaps = 1/374 (0%)

Query: 143  LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
            L+    N  +  +  TYN ++  L + GL ++ QV F  MR+ G LP+       ++   
Sbjct: 1212 LQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYC 1271

Query: 203  RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
            +AG    A  L    R   +  +   YN L++   +  + +EA  + +E       P+  
Sbjct: 1272 KAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVC 1331

Query: 263  TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            T+ IL++G   +  +  A EFF +M S G  PD   YNT I     + ++AR  EL +EV
Sbjct: 1332 TYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFEL-REV 1390

Query: 323  KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                  S D VTY  +I G CK G +  A  +  +M S G++P  +T+  LI    + G 
Sbjct: 1391 LMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGL 1450

Query: 383  MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
            +  A  +   M+S G LP  VTF+ +I  YCR G L        +M  + + PN  T+ +
Sbjct: 1451 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 1510

Query: 443  LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
            LI+ALC+  R   A     ++    LV   + Y  +IDG CK GN ++A     EM +  
Sbjct: 1511 LIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG 1570

Query: 503  CKPDKVTFTILIIG 516
              PD +T   L+ G
Sbjct: 1571 IHPDYLTHKALLKG 1584



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 4/246 (1%)

Query: 329  SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            +PDV     V+       + D    ++ EM   GI+PS VT+N L+D F K G       
Sbjct: 1081 APDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAM 1140

Query: 389  MRERMLSFGY--LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
            + + M + G   LP+ VT++ +I G  R G L +  +L + M+    + + +T+  LI  
Sbjct: 1141 LLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS-FTYNPLITG 1199

Query: 447  LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            L     +        +++   ++P    YN +I G  ++G V+ A V  AEM      PD
Sbjct: 1200 LLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPD 1259

Query: 507  KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             +T+  L+ G+C  G + EA+ +F  + R G AP  +T N LI    + G   EA RI++
Sbjct: 1260 VITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEA-RILK 1318

Query: 567  RASEDQ 572
                +Q
Sbjct: 1319 EEMGEQ 1324



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 76/166 (45%)

Query: 141  KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
            K L+   V+  L     TY  ++ + CE GL    + +F+ M SDG LP++      + +
Sbjct: 1420 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 1479

Query: 201  CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
              R G   +A G   +     V  +   YN L++AL +      A + F E        +
Sbjct: 1480 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 1539

Query: 261  TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
             +T+ +LI G  ++G  + A  F+++M   G  PD +T+  L+ G 
Sbjct: 1540 KYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 7/149 (4%)

Query: 414  RNGQLNQGLKLC----DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            R+  L+    LC     EM    ++P+V     ++  L    R +D     +++    + 
Sbjct: 1057 RDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIE 1116

Query: 470  PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK--RCKPDKVTFTILIIGHCMKGRMVEAI 527
            P    YN ++D F K G  D+  +++ EME +   C P+ VT+ ++I G   KG + EA 
Sbjct: 1117 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 1176

Query: 528  SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             +   M R+       T N LI+ LL  G
Sbjct: 1177 ELVEGM-RLSKKASSFTYNPLITGLLARG 1204


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 182/368 (49%), Gaps = 39/368 (10%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L+ L + N  + A   + + +R+  + + +TFNI+I  L + G++KKA  F   M S
Sbjct: 195 NHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMES 254

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
           FG  P IVTYNTL+ G      +     ++ E+K K  F PD+ TY  ++S  C  G+  
Sbjct: 255 FGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG-FQPDLQTYNPILSWMCNEGR-- 311

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP--------- 400
            A+ +  EM   G+ P +V++N+LI G    G++ +A   R+ M+  G +P         
Sbjct: 312 -ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLI 370

Query: 401 --------------------------DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
                                     D VT++ +I+GYC++G   +   L DEM    + 
Sbjct: 371 HGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIK 430

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P  +T+T LI  LC+ N+  +A    +++    + P   M N ++DG C  GN+D A  +
Sbjct: 431 PTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSL 490

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           + EM+     PD VT+  L+ G C +G+  EA  +  +M R G  PD I+ N+LIS   K
Sbjct: 491 LKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550

Query: 555 GGMPNEAF 562
            G    AF
Sbjct: 551 KGDTKHAF 558



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 193/397 (48%), Gaps = 4/397 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC+ G     +     M S G  P        V      G+ + A+ ++S+ 
Sbjct: 228 TFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEM 287

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +          YN +L+ +  +  A E +   +E   +   PD+ ++NILI+G S  G++
Sbjct: 288 KSKGFQPDLQTYNPILSWMCNEGRASEVL---REMKGIGLVPDSVSYNILIRGCSNNGDL 344

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF +  +M   G  P   TYNTLI GL   N++     L++E++ K     D VTY  
Sbjct: 345 ETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG-IVLDSVTYNI 403

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+GYC+ G   KA  +++EM + GIKP+  T+  LI    +      A+ + E+++  G
Sbjct: 404 VINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKG 463

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V  ++L+DG+C  G +++   L  EM   N+ P+  T+  L+  LC E +  +AR
Sbjct: 464 MKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEAR 523

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++K   + P    YN +I G+ K G+   A ++  EM      P  +T+  L+ G 
Sbjct: 524 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGL 583

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
                   A  +  +M   G  P+D +  S+I  + K
Sbjct: 584 SKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 201/445 (45%), Gaps = 40/445 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           ++ ++R  C++ + D     F  M+  G  P +      +S   R  + + A    +   
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             E+  + + +N ++N L K+    +A            +P   T+N L+QG S  G ++
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIE 278

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK--------------- 323
            A     +M S G  PD+ TYN ++S +C  NE  R  E+L+E+K               
Sbjct: 279 GARMIISEMKSKGFQPDLQTYNPILSWMC--NE-GRASEVLREMKGIGLVPDSVSYNILI 335

Query: 324 -------------------FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                               K    P   TY ++I G     K++ A  +  E+   GI 
Sbjct: 336 RGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 395

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
             +VT+N++I+G+ + G+   A  + + M++ G  P   T++SLI   CR  +  +  +L
Sbjct: 396 LDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADEL 455

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +++ GK + P++     L++  C    ++ A   LK++   ++ P    YN ++ G C 
Sbjct: 456 FEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCG 515

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G  +EA  ++ EM+ +  KPD +++  LI G+  KG    A  + ++ML +G  P  +T
Sbjct: 516 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLT 575

Query: 545 VNSLISCLLK---GGMPNEAFRIMQ 566
            N+L+  L K   G +  E  R M+
Sbjct: 576 YNALLKGLSKNQDGELAEELLREMK 600



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 152/332 (45%), Gaps = 4/332 (1%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            +TYN ++  +C  G       V   M+  G +P+S      +  C   G  + A     
Sbjct: 296 LQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRD 352

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  + + YN+L++ L  +N  + A  + +E        D+ T+NI+I G  + G
Sbjct: 353 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHG 412

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + KKAF    +M + G  P   TY +LI  LCR N+     EL ++V  K    PD+V  
Sbjct: 413 DAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKG-MKPDLVMM 471

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ G+C  G MD+A  +  EM+   I P  VT+N L+ G    G    A  +   M  
Sbjct: 472 NTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 531

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD +++++LI GY + G       + DEM     +P + T+  L+  L K      
Sbjct: 532 RGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGEL 591

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           A   L+++K   +VP    +  VI+   K+ N
Sbjct: 592 AEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 153/308 (49%), Gaps = 4/308 (1%)

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
           T  F+ +++   ++  V +A E FY M   G  P   T N ++S L R+N +        
Sbjct: 156 TILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYA 215

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           ++ ++ E   +V T+  +I+  CK GK+ KA G    M S GIKP+ VT+N L+ G+   
Sbjct: 216 DM-YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  +   M S G+ PD+ T++ ++   C  G+ ++ L+   EMKG  L P+  ++
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLR---EMKGIGLVPDSVSY 331

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            ILI        L  A  +  ++    +VP  + YN +I G      ++ A +++ E+ E
Sbjct: 332 NILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 391

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K    D VT+ I+I G+C  G   +A ++ ++M+  G  P   T  SLI  L +     E
Sbjct: 392 KGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTRE 451

Query: 561 AFRIMQRA 568
           A  + ++ 
Sbjct: 452 ADELFEKV 459



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 1/261 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +F TYN ++  L      ++ +++   +R  G + +S      ++   + G    A  L 
Sbjct: 362 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALH 421

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  + F Y SL+  L ++N   EA  +F++      +PD    N L+ G    
Sbjct: 422 DEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAT 481

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +AF    +M      PD VTYN L+ GLC   +     EL+ E+K +    PD ++
Sbjct: 482 GNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG-IKPDHIS 540

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++ISGY K G    A  + +EM S G  P+ +T+N L+ G  K  +   AE +   M 
Sbjct: 541 YNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMK 600

Query: 395 SFGYLPDVVTFSSLIDGYCRN 415
           S G +P+  +F S+I+   ++
Sbjct: 601 SEGIVPNDSSFCSVIEAMSKS 621


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 211/431 (48%), Gaps = 19/431 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++  LC     +    +   M+  G  P+  ++   ++ C  + + D  + +  + 
Sbjct: 340 VYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYC--SEEVDIYRLIEERL 397

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK--------------EYFRLYS--QPDT 261
              +      +YNS+LN LV   + D+A Y+ +              ++F +    +PDT
Sbjct: 398 EDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDT 457

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            +F+I+I GL   G++  A   F DM   GC  +++ YN LI  L   N +   + LLKE
Sbjct: 458 TSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKE 517

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +K  S F P   T+ S+    C+   +  A  +  EM   G +P    + +L+    K  
Sbjct: 518 MK-GSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 576

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
               A      M+  G+LPD+V +S+ IDG+ +   ++Q L++  ++  +   P+V  + 
Sbjct: 577 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 636

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LIN  CK  R+++A   L ++    LVP    YN +IDG+CK G++D+A   ++ M  K
Sbjct: 637 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGK 696

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             +P+ +T+T LI G C  GR  +AI ++N+M   GC+P+ I+  +LI  L K G P+ A
Sbjct: 697 EREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAA 756

Query: 562 FRIMQRASEDQ 572
               +   E +
Sbjct: 757 LLYFREMGERE 767



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 180/392 (45%), Gaps = 3/392 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K Y L +R++      D+ +V   +M  +   P++      +      GK D A  L   
Sbjct: 424 KAYYL-LRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRD 482

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +  +YN+L++ L   N  +E   + KE      +P  +T N +   L R  +
Sbjct: 483 MVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRRED 542

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A +   +M   G  P I  Y  L+  LC+    A     L E+  +  F PD+V Y+
Sbjct: 543 VTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEM-VREGFLPDIVAYS 601

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           + I G+ K+  +D+A  I+ ++ + G  P  V +N LI+GF KV  +  A  + + M++ 
Sbjct: 602 AAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAK 661

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +P VVT++ LIDG+C+NG ++Q       M GK   PNV T+T LI+ LC   R +DA
Sbjct: 662 GLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDA 721

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                +++     P    +  +I G CK G  D A +   EM E+   PD + +  LI  
Sbjct: 722 IHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITS 780

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
                    A  I  +M+  G  PD +  N L
Sbjct: 781 FISNKNPTLAFEILKEMVAKGKFPDPLDKNDL 812



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/523 (23%), Positives = 205/523 (39%), Gaps = 87/523 (16%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYN---------------------------- 160
           V+  L + K+  +F  ++      NH+  TYN                            
Sbjct: 101 VLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCA 160

Query: 161 -------LVMRSLCEMGLHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKG 212
                    +R L   GL +   ++FD ++     +PNS      + +  ++G  D  + 
Sbjct: 161 MSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEM 220

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            L +          +   S+L A       D+A+ +F E +      D    +IL+   S
Sbjct: 221 RLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYG-RGWVDGHVLSILVLTFS 279

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + GEV KAFE    M   G   +  T+  LI G  R + V +  +L K+++ KS F+PDV
Sbjct: 280 KCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQ-KSGFAPDV 338

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA------------------------- 367
             Y ++I G C   +++KA  + +EM   GI P                           
Sbjct: 339 SVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLE 398

Query: 368 --------VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL----------------PDVV 403
                   + +N +++G     ++  A Y+   M    Y                 PD  
Sbjct: 399 DLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTT 458

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           +FS +IDG C  G+L+  L L  +M       NV  +  LI+ L   NRL +    LK++
Sbjct: 459 SFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM 518

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           K +   P  F +N +    C+  +V  A  +V EM     +P    +T+L+   C + R 
Sbjct: 519 KGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRS 578

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            EA +   +M+R G  PD +  ++ I   +K    ++A  I +
Sbjct: 579 AEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFR 621



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 178/389 (45%), Gaps = 24/389 (6%)

Query: 198 VSSCIRAGKCDAAKGLLS-QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY--FR 254
           ++SC+   + +A   LLS         MS       +  L      +EA  +F +    R
Sbjct: 134 MASCLSHARQNAPLSLLSMDIVNSRCAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMR 193

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           L   P++++FN L++ +S+ G +        +M   G  PD  T  +++   C   +  +
Sbjct: 194 L-CVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDK 252

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              +  E+  +      V++   ++  + K G++DKA  +   M   GI+ +  TF VLI
Sbjct: 253 ALSVFNEIYGRGWVDGHVLSI--LVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLI 310

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            GF +   +  A  + ++M   G+ PDV  + +LI G C   ++ + L L  EMK   + 
Sbjct: 311 HGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGID 370

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++   + LI A C E  ++  R   ++L+  D      +YN V++G     +VD+A  +
Sbjct: 371 PDIQILSKLI-AYCSE-EVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYL 428

Query: 495 VAEME----------------EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           +  M                 ++  +PD  +F+I+I G C  G++  A+S+F  M+R+GC
Sbjct: 429 LRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGC 488

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQR 567
             + +  N+LI  L       E + +++ 
Sbjct: 489 KQNVLLYNNLIDKLSNSNRLEECYLLLKE 517



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 17/227 (7%)

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY-LPDVVTFSSLIDGYCRNGQLN 419
           C + P A+ F   I   G  G +  A  + +++      +P+  +F+ L++   ++G ++
Sbjct: 159 CAMSPGALGF--FIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSID 216

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK-WNDLVPKPFMYNPV 478
                  EM      P+ YT T ++ A C      ++R+F K L  +N++  + ++   V
Sbjct: 217 LVEMRLKEMCDSGWEPDKYTLTSVLQAYC------NSRKFDKALSVFNEIYGRGWVDGHV 270

Query: 479 ID----GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           +      F K G VD+A  ++  ME+   + ++ TF +LI G   + R+ +A+ +F KM 
Sbjct: 271 LSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQ 330

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE---DQNLQLPS 578
           + G APD    ++LI  L       +A  ++    E   D ++Q+ S
Sbjct: 331 KSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILS 377


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ S C+ G  D    +   M+  G  PN       V+   + G+ + AKGL+ + 
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +S + YN L+N   ++    EA  + +E     + P   T+N L+ GL +  +V
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                 F DM     +PDIV++N+L+ G CR   ++    L  E+K + +  P V+TY +
Sbjct: 337 TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCR-DLVPTVITYNT 395

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  G +D A  +  EM   G+ P   T+ +L++G  K+G +  A      MLS G
Sbjct: 396 LIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD   +++ I G  +    +    + +EM      P+V T+ + ++ALC++    +A 
Sbjct: 456 LKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEAC 515

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+ +  + L+P    Y  +I+GF K G++ +A  +  EM  K   P  VT+T+LI  H
Sbjct: 516 DLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAH 575

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             K  +  A   F+KML      + IT N++I+ L      +EA++      E
Sbjct: 576 AAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEE 628



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 165/348 (47%), Gaps = 36/348 (10%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD    N +++ L     + KA   +  M  FG  P +VTYNT++   C+   V +  EL
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E++ +  + P+ VTY  +++G  K G++++A G+  EM + G+  SA T+N LI+GF 
Sbjct: 238 LSEMQERGCY-PNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFC 296

Query: 379 KVGNMVSA----EYMRER-------------------------------MLSFGYLPDVV 403
           + G  V A    E M  R                               ML   + PD+V
Sbjct: 297 QKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIV 356

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           +F+SL+ GYCR G +++   L DE+K ++L P V T+  LI+ LC    L+ A R  K++
Sbjct: 357 SFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEM 416

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               L P  F Y  +++G  K G V  A     EM  K  KPD+  +   I+G       
Sbjct: 417 TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADT 476

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             A S+  +ML  G  PD IT N  +  L + G   EA  +++    D
Sbjct: 477 SVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 163/339 (48%), Gaps = 24/339 (7%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S F++ ++L+ LV  N+   A Y   E  R+ S       ++LI G      V      F
Sbjct: 118 SEFVFCAILDILVG-NDLMHAAYWVME--RVVSFEMHGVVDVLIAGHVXCLLV------F 168

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK----FKSEFS--PDVVTYTSV 338
             M   G  PD+   N       R+  V R   LL + K       +F   P VVTY ++
Sbjct: 169 DKMIRNGLLPDVKNCN-------RILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTM 221

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +  YCK G++D+A  + +EM   G  P+ VT+NVL++G  K G +  A+ + E ML+ G 
Sbjct: 222 LDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGL 281

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR- 457
                T++ LI+G+C+ G   +   L +EM  +   P + T+  L+  LCK  ++   R 
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRL 341

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           RF   LK +   P    +N ++ G+C+ G + EA ++  E++ +   P  +T+  LI G 
Sbjct: 342 RFSDMLK-SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           CM G +  A+ +  +M   G  PD  T   L++   K G
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG 439



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 138/297 (46%), Gaps = 1/297 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  D+   +   M   G  P+       V+ C + G    A+G  ++ 
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F YN+ +   +K  +   A  M +E       PD  T+N+ +  L + G  
Sbjct: 452 LSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNF 511

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +   +M S G  PD VTY ++I+G  +   + +  E+  E+  K   +P VVTYT 
Sbjct: 512 EEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG-VAPSVVTYTV 570

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +     +D A   +++M    +  + +T+N +I+G      M  A    + M   G
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            LP+  +++ LI+  C  G   + L+L  EM  + + P+ +T ++ +  L ++ +++
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 1/245 (0%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV     ++        + KA  +Y  M   GIKP+ VT+N ++D + K G +  A  +
Sbjct: 178 PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALEL 237

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  P+ VT++ L++G  + G+L Q   L +EM    L+ + YT+  LIN  C+
Sbjct: 238 LSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQ 297

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           +    +A   ++++      P    YN ++ G CK   V    +  ++M + +  PD V+
Sbjct: 298 KGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVS 357

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           F  L+ G+C  G + EA  +F+++      P  IT N+LI  L   G  + A R +++  
Sbjct: 358 FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALR-LKKEM 416

Query: 570 EDQNL 574
            DQ L
Sbjct: 417 TDQGL 421



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 13/206 (6%)

Query: 364 KPSAVTFNVLIDGFGKVGN--MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           K S   F  ++D    VGN  M +A ++ ER++SF  +  VV    LI G+         
Sbjct: 116 KESEFVFCAILDIL--VGNDLMHAAYWVMERVVSFE-MHGVV--DVLIAGHV------XC 164

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L + D+M    L P+V     ++  L  EN L+ A+     ++   + P    YN ++D 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +CK G VD+A  +++EM+E+ C P+ VT+ +L+ G   KG + +A  +  +ML  G    
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQR 567
             T N LI+   + G+  EAF +++ 
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEE 310


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 198/398 (49%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++  L + G  D    +++ M     +PN  +    + +  +  + +    +  + 
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEM 401

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N+ ++ + K    ++   +F+E       PDT +++ILI  L + G  
Sbjct: 402 MRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFA 461

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++ +E +Y M   GC  D   YNT+I G C+  +V + ++LL+E+K      P VVTY S
Sbjct: 462 RETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGH-HPTVVTYGS 520

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G  K+ ++D+A  ++ E  S GI+ + V ++ LIDGFGKVG +  A  + E M+  G
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ L+DG  +  ++N+ L     MK    +PN  T+ ILIN LCK  + N A 
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAF 640

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++   L P    Y  +I G  K+GNV +A+ +          PD  ++  +I G 
Sbjct: 641 VFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL 700

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +  R ++A  +F +    GC+    T  +L+  L K 
Sbjct: 701 SIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKA 738



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 207/444 (46%), Gaps = 36/444 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G  ++   V D M+  G  PN   I   +    +A K D A  +    
Sbjct: 272 TYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGM 331

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +     + SL++ L KQ   D+A  +++        P+   +  LI+   +    
Sbjct: 332 DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRK 391

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT- 336
           +   + + +M   GCSPD++  NT +  + +  E  +G  L +E+K +  F PD  +Y+ 
Sbjct: 392 EDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARG-FLPDTRSYSI 450

Query: 337 ----------------------------------SVISGYCKLGKMDKATGIYNEMNSCG 362
                                             +VI G+CK GK++KA  +  EM + G
Sbjct: 451 LIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMG 510

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P+ VT+  ++DG  K+  +  A  + E   S G   + V +SSLIDG+ + G++++  
Sbjct: 511 HHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAY 570

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM  K L+PNVYT+  L++ L K   +N+A    + +K     P    Y  +I+G 
Sbjct: 571 LVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGL 630

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK    ++A V   EM+++  KP+ +T+T +I G    G + +A S+F +    G  PD 
Sbjct: 631 CKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDS 690

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
            + N++I  L       +A+++ +
Sbjct: 691 ASYNAMIEGLSIANRALDAYQLFE 714



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 189/419 (45%), Gaps = 37/419 (8%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D ++ +   M   G  P +      V+SC+++ K   A  LL   R  +   +   Y +L
Sbjct: 8   DYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTL 67

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           + AL +   +D  + +F +   L  + +      LI+  SR G V  A     +M S   
Sbjct: 68  IGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
             DIV YN  I    +V +V    +   E+K  +   PD VTYTS++   CK  ++D+A 
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMK-ANGLVPDDVTYTSMMGVLCKANRLDEAV 186

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            I+ +M      P A  +N +I G+G  G    A  + ER  + G +P VV ++ ++   
Sbjct: 187 EIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCL 246

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            + G+ ++ L++ +EMK ++  PN+ T+ I+I  LCK   +  A +    +K   L P  
Sbjct: 247 GKKGKTDKALRIFEEMK-RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNV 305

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
              N +ID  CKA  +DEA  I   M+ K C PD  TF  LI G   +GR+ +A  I+ +
Sbjct: 306 RTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYER 365

Query: 533 ML-----------------------------------RIGCAPDDITVNSLISCLLKGG 556
           ML                                   R GC+PD + +N+ + C+ K G
Sbjct: 366 MLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG 424



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 211/516 (40%), Gaps = 105/516 (20%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +F  Y  ++ +L E+G  D +  +F+ M+  G+  N  ++   +    R G+ DAA  LL
Sbjct: 60  AFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLL 119

Query: 215 SQFRP--------------------GEVTMS---------------TFMYNSLLNALVKQ 239
            + +                     G+V M+                  Y S++  L K 
Sbjct: 120 DEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKA 179

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV-- 297
           N  DEAV +F++  +    P  + +N +I G    G+  +A+       + GC P +V  
Sbjct: 180 NRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAY 239

Query: 298 --------------------------------TYNTLISGLCRVNEVARGHELLKEVKFK 325
                                           TYN +I  LC+   V    ++   +K  
Sbjct: 240 NCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEA 299

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             F P+V T   +I   CK  K+D+A  I+  M+     P   TF  LIDG GK G +  
Sbjct: 300 GLF-PNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDD 358

Query: 386 AEYMRERMLSFGYLPDVVTFSSLI----------DGY----------C------------ 413
           A  + ERML    +P+VV ++SLI          DG+          C            
Sbjct: 359 AYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMD 418

Query: 414 ---RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
              + G+  +G  L +E+K +   P+  +++ILI++L K     +       +K    V 
Sbjct: 419 CVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVL 478

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               YN VIDGFCK+G V++A  ++ EM+     P  VT+  ++ G     R+ EA  +F
Sbjct: 479 DTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLF 538

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +    G   + +  +SLI    K G  +EA+ +M+
Sbjct: 539 EEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVME 574



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 157/336 (46%), Gaps = 2/336 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+ + VK     EA  + +       +P    +  LI  LS +GE  +    F  M   G
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
              ++    TLI    R   V     LL E+K  + F  D+V Y   I  + K+GK+D A
Sbjct: 92  YEVNVHLLTTLIRVFSREGRVDAALSLLDEMK-SNTFDADIVLYNVCIDCFGKVGKVDMA 150

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
              ++EM + G+ P  VT+  ++    K   +  A  + E+M     +P    ++++I G
Sbjct: 151 WKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMG 210

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y   G+ ++   L +  + K   P+V  +  ++  L K+ + + A R  +++K  D +P 
Sbjct: 211 YGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK-RDAMPN 269

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I   CKAGNV+ A  +   M+E    P+  T  I+I   C   ++ EA SIF 
Sbjct: 270 LPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFE 329

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            M    C+PD  T  SLI  L K G  ++A+RI +R
Sbjct: 330 GMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYER 365



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 151/300 (50%), Gaps = 1/300 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++Y++++ SL + G       ++  M+  G + ++      +    ++GK + A  LL +
Sbjct: 446 RSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 505

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +      +   Y S+++ L K +  DEA  +F+E      + +   ++ LI G  ++G 
Sbjct: 506 MKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGR 565

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A+    +M   G +P++ T+N L+ GL +  E+       + +K   + +P+ +TY 
Sbjct: 566 VDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMK-DLKCTPNQITYC 624

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G CK+ K +KA   + EM   G+KP+ +T+  +I G  K GN+  A  + ER  + 
Sbjct: 625 ILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRAS 684

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD  +++++I+G     +     +L +E + K  S +  T   L++AL K   L  A
Sbjct: 685 GGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 140/286 (48%), Gaps = 4/286 (1%)

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-FKSEFSPDVVTYTSVISGYCK 344
           +M   G  P   T   L++   +  ++    +LL+ ++ FK  F P    YT++I    +
Sbjct: 16  EMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFK--FRPAFSAYTTLIGALSE 73

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +G+ D+   ++N+M   G + +      LI  F + G + +A  + + M S  +  D+V 
Sbjct: 74  VGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVL 133

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++  ID + + G+++   K   EMK   L P+  T+T ++  LCK NRL++A    +Q++
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQME 193

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            N  VP  + YN +I G+  AG  DEA  ++     K C P  V +  ++     KG+  
Sbjct: 194 QNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTD 253

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +A+ IF +M R    P+  T N +I  L K G    AF++     E
Sbjct: 254 KALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKE 298



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 118/252 (46%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F P   T   +++   K  K+ +A  +   M     +P+   +  LI    +VG      
Sbjct: 22  FGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRML 81

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +M   GY  +V   ++LI  + R G+++  L L DEMK      ++  + + I+  
Sbjct: 82  ALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCF 141

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            K  +++ A +F  ++K N LVP    Y  ++   CKA  +DEA  I  +ME+ R  P  
Sbjct: 142 GKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCA 201

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +  +I+G+   G+  EA S+  +    GC P  +  N +++CL K G  ++A RI + 
Sbjct: 202 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEE 261

Query: 568 ASEDQNLQLPSW 579
              D    LP++
Sbjct: 262 MKRDAMPNLPTY 273



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 37/190 (19%)

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           ++  EM      P  YT   L+ +  K  +L +A   L+ ++     P    Y  +I   
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI------------- 529
            + G  D    +  +M+E   + +    T LI     +GR+  A+S+             
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 530 ----------------------FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
                                 F++M   G  PDD+T  S++  L K    +EA  I ++
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 568 ASEDQNLQLP 577
              +QN Q+P
Sbjct: 192 M--EQNRQVP 199


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 196/373 (52%), Gaps = 15/373 (4%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS-DGHLPNSPMIEFFVSSCIRAGK 206
           +   LNH   TY +++  LC+MG     +     +R  +G L N+ ++ +   S I  G 
Sbjct: 152 LGFHLNHV--TYGILINGLCKMG---QTRAALQVLRQIEGKLVNTNVVMY---STIIDGL 203

Query: 207 CDA-----AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           C       A GL S+     +  +   ++SL+          +A  +F E       PD 
Sbjct: 204 CKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDA 263

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +TFNIL+  L + G++K+A      M   G  P +VTYNTL+ G C VNEV +   +L  
Sbjct: 264 YTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSI 323

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  +   +P+  +Y  +I+G+CK+  +D+A  +++EM   GI P  VT+N LIDG  K G
Sbjct: 324 IS-RMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAG 382

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + + M +     D+VT++SLID +C+N  +++ + L  ++K   + PN+ T+ 
Sbjct: 383 RIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYN 442

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           ILI+ LCK  +L +A+   + L         + YN +I+G CK G  DEA V++++ME+ 
Sbjct: 443 ILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDN 502

Query: 502 RCKPDKVTFTILI 514
              PD VT+  +I
Sbjct: 503 GIIPDAVTYETII 515



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 204/417 (48%), Gaps = 2/417 (0%)

Query: 151 SLNHSFKTYNLVMR-SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
            +  +F  +  +++  LC  G  +   +  D++ + G   N       ++   + G+  A
Sbjct: 117 QMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRA 176

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +L Q     V  +  MY+++++ L K     +A  ++ E       P   TF+ LI 
Sbjct: 177 ALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIY 236

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G   +G+ K AF  F +M     +PD  T+N L+  LC+  ++     ++  V  K    
Sbjct: 237 GFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIA-VMMKEGVE 295

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P VVTY +++ GYC + ++ KA  + + ++   + P++ ++N++I+GF K+  +  A  +
Sbjct: 296 PTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCL 355

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  P  VT++SLIDG C+ G++    +L DEM    +  ++ T+  LI+  CK
Sbjct: 356 FHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCK 415

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              ++ A   +K++K + + P    YN +IDG CK G +  A  +  ++  K    +  T
Sbjct: 416 NQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWT 475

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           + I+I G C +G   EA  + +KM   G  PD +T  ++I  L       +A ++++
Sbjct: 476 YNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLR 532



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 173/348 (49%), Gaps = 2/348 (0%)

Query: 220 GEVTMSTFMYNSLLN-ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
           G++T +  ++  +L   L      +EA+        L    +  T+ ILI GL ++G+ +
Sbjct: 116 GQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTR 175

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A +    +     + ++V Y+T+I GLC+   V   + L  E+  K    P VVT++S+
Sbjct: 176 AALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVK-RIPPTVVTFSSL 234

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+C +GK   A  ++NEM    I P A TFN+L+D   K G +  A+ +   M+  G 
Sbjct: 235 IYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGV 294

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P VVT+++L+DGYC   ++ +   +   +    ++PN  ++ I+IN  CK   +++A  
Sbjct: 295 EPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALC 354

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++    + P    YN +IDG CKAG +  A  +V EM       D VT+  LI   C
Sbjct: 355 LFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFC 414

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               + +AI++  K+   G  P+  T N LI  L KGG    A  + Q
Sbjct: 415 KNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 180/386 (46%), Gaps = 25/386 (6%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNI 266
           D A    ++ R    T S   +N +L  L+K  N    V            +PD +T +I
Sbjct: 48  DNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSI 107

Query: 267 LIQGLSRIGEVKKAFEFF---YDMG------------------SFGCSPDIVTYNTLISG 305
           LI     +G++  AF  F     MG                  + G   + VTY  LI+G
Sbjct: 108 LINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILING 167

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           LC++ +     ++L++++ K   + +VV Y+++I G CK   +  A G+Y+EM    I P
Sbjct: 168 LCKMGQTRAALQVLRQIEGKL-VNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPP 226

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           + VTF+ LI GF  VG    A  +   M+     PD  TF+ L+D  C+ G++ +   + 
Sbjct: 227 TVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVI 286

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
             M  + + P V T+  L++  C  N +  A+  L  +    + P    YN +I+GFCK 
Sbjct: 287 AVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKI 346

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI-T 544
             VDEA  +  EM  +   P KVT+  LI G C  GR+  A  + ++M    C P DI T
Sbjct: 347 KMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN-NCIPADIVT 405

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASE 570
            NSLI    K    ++A  ++++  E
Sbjct: 406 YNSLIDVFCKNQHVDKAIALVKKIKE 431



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 3/292 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+N+++ +LC+ G     + V   M  +G  P        +       +   A
Sbjct: 258 NINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKA 317

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K +LS      V  ++  YN ++N   K    DEA+ +F E       P   T+N LI G
Sbjct: 318 KHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDG 377

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +  A+E   +M +     DIVTYN+LI   C+   V +   L+K++K +    P
Sbjct: 378 LCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIK-EHGIQP 436

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           ++ TY  +I G CK G++  A  ++ ++   G   +A T+N++I+G  K G    AE + 
Sbjct: 437 NMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLL 496

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
            +M   G +PD VT+ ++I       +  +  KL  EM  K +   VY F I
Sbjct: 497 SKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV--VYAFEI 546


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 215/448 (47%), Gaps = 16/448 (3%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +++++ I+R    +L L              S K YNL +RSL    + + +  ++  + 
Sbjct: 130 VDAIQAIRRAGGKRLAL--------------SPKCYNLALRSLLRFDMTEHMGKLYSQLV 175

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
            +G LP++      + +  + G    A       R   + M T+  N+LL    +  +  
Sbjct: 176 QEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLR 235

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           +A ++      +  + + +++ ILIQGL     V++A      M   GCSP++ TY  LI
Sbjct: 236 KACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLI 295

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GLC+   +     LL E+  +    P V TY ++I GYCK G++  A GI   M   G 
Sbjct: 296 RGLCKEGRIHDARVLLDEMPRRG-VVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGC 354

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   T+N LI G    G    AE +    ++ G+ P V+TF+++I+GYC+  +++  L+
Sbjct: 355 NPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALR 413

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +   M       ++  + +LI+ L K++RL +A+  L ++  N L P   +Y  +ID +C
Sbjct: 414 VKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYC 473

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G V  A  +    E + C+P+  T++ LI G     ++ +A+++  KM   G  P  I
Sbjct: 474 KVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVI 533

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASED 571
           T  +LI    K    + AFR+ +   ++
Sbjct: 534 TYTTLIQGQCKKHEFDNAFRLFEMMEQN 561



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 179/366 (48%), Gaps = 4/366 (1%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +S  I+  +   AK  L++     ++ +  +Y S+++A  K      A+ +FK      
Sbjct: 433 LISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEG 492

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            +P+ WT++ LI GL +  ++ KA      M   G +P ++TY TLI G C+ +E     
Sbjct: 493 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 552

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            L  E+  ++  +PD   Y  +    CK G+ ++A   Y+ +   G+  + VT+  L+DG
Sbjct: 553 RLF-EMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVKKGVVLTKVTYTSLVDG 608

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K GN   A  + E+M++ G   D  T+S L+   C+  +LN+ L + D+M  + +  N
Sbjct: 609 FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGN 668

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           +  +TI+I+ + KE + + A+    ++  +   P    Y   I  +CK G ++EA  ++ 
Sbjct: 669 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EME     PD VT+ + I G    G M  A S   +M+   C P+  T   L+   LK  
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS 788

Query: 557 MPNEAF 562
           + N  +
Sbjct: 789 LANAHY 794



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 193/410 (47%), Gaps = 5/410 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  D  + + +   + G  P        ++   +A K D A  + S  
Sbjct: 360 TYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIM 418

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +  +    Y  L++ L+K++   EA     E F     P+   +  +I    ++G+V
Sbjct: 419 ISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKV 478

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F      GC P+  TY++LI GL +  ++ +   L+ +++ +   +P V+TYT+
Sbjct: 479 GAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ-EDGITPGVITYTT 537

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  + D A  ++  M   G+ P    +NVL D   K G    AE     ++  G
Sbjct: 538 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVKKG 594

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +   VT++SL+DG+ + G       L ++M  +    + +T+++L+ ALCK+ +LN+A 
Sbjct: 595 VVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEAL 654

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L Q+    +      Y  +I    K G  D A  +  EM     KP  +T+T+ I  +
Sbjct: 655 SILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSY 714

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C  GR+ EA  +  +M R G APD +T N  I+     G  + AF  ++R
Sbjct: 715 CKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKR 764



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 176/376 (46%), Gaps = 40/376 (10%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y  L+  L K+    +A  +  E  R    P  WT+N +I G  + G +K A      M 
Sbjct: 291 YTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLME 350

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             GC+PD  TYN+LI GLC   +     ELL     +  FSP V+T+T++I+GYCK  K+
Sbjct: 351 GNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARG-FSPTVITFTNIINGYCKAEKI 408

Query: 349 DKATGI-----------------------------------YNEMNSCGIKPSAVTFNVL 373
           D A  +                                    NE+ + G+ P+ V +  +
Sbjct: 409 DDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSI 468

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           ID + KVG + +A  + +     G  P+  T+SSLI G  ++ +L++ + L  +M+   +
Sbjct: 469 IDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGI 528

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P V T+T LI   CK++  ++A R  + ++ N L P    YN + D  CK+G  +EA  
Sbjct: 529 TPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYS 588

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
            +    +K     KVT+T L+ G    G    A ++  KM+  GC  D  T + L+  L 
Sbjct: 589 FLV---KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALC 645

Query: 554 KGGMPNEAFRIMQRAS 569
           K    NEA  I+ + +
Sbjct: 646 KQKKLNEALSILDQMT 661



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 184/438 (42%), Gaps = 55/438 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++  C+    D+   +F+ M  +G  P+         +  ++G+ + A   L   
Sbjct: 534 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--V 591

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           + G V ++   Y SL++   K  N + A  + ++      + D+ T+++L+Q L +  ++
Sbjct: 592 KKG-VVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKL 650

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G   +IV Y  +IS + +  +      +  E+   S   P  +TYT 
Sbjct: 651 NEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM-ISSGHKPSAITYTV 709

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-------------- 383
            IS YCK+G++++A  +  EM   G+ P  VT+NV I+G G +G M              
Sbjct: 710 FISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDAS 769

Query: 384 --------------------VSAEY-----------------MRERMLSFGYLPDVVTFS 406
                                +A Y                 + ERM+  G  P  VT+S
Sbjct: 770 CEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYS 829

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           S+I G+C+  +L +   L D M GK++SPN   +T+LI   C       A  F+  +   
Sbjct: 830 SIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIEC 889

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    Y+ +I G C  G+ D+A  +  ++ E     ++V + IL  G    G +   
Sbjct: 890 GFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDIC 949

Query: 527 ISIFNKMLRIGCAPDDIT 544
             + + M    C  D  T
Sbjct: 950 SQLLSAMENRHCRIDSET 967



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/463 (22%), Positives = 186/463 (40%), Gaps = 73/463 (15%)

Query: 148  VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
            VN        TY++++++LC+    +    + D M   G   N       +S  I+ GK 
Sbjct: 626  VNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKH 685

Query: 208  DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            D AK + ++        S   Y   +++  K    +EA ++  E  R    PD  T+N+ 
Sbjct: 686  DHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVF 745

Query: 268  IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL--------- 318
            I G   +G +  AF     M    C P+  TY  L+    +++ +A  H +         
Sbjct: 746  INGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS-LANAHYVDTSGMWNWI 804

Query: 319  -------LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
                   L E   K   +P  VTY+S+I+G+CK  ++++A  + + M    I P+   + 
Sbjct: 805  KLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 864

Query: 372  VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL-CDEMKG 430
            +LI     +     A      M+  G+ P + ++  LI G C  G  ++   L CD    
Sbjct: 865  MLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCD---- 920

Query: 431  KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
                                         L ++ +N        +  + DG  KAG+VD 
Sbjct: 921  -----------------------------LLEMDYNH---NEVAWKILNDGLLKAGHVDI 948

Query: 491  ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             + +++ ME + C+ D  T++++         + EA  ++   +   CAP  +  N +  
Sbjct: 949  CSQLLSAMENRHCRIDSETYSMV------TNNIHEASGMYESYM---CAP-LVGQNRMQH 998

Query: 551  CLLKGGMPNEAF------RIMQRASEDQNLQLPSWKKAVPLRT 587
             LL  G+ +  +      R+ Q AS  + L L  + + + LRT
Sbjct: 999  ALL--GLAHLTYSASPVPRLTQHASTTRLLNLKGYSETL-LRT 1038


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 205/407 (50%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN V+   C++   ++   V + M++ G LP+       + S     K   A  +L Q 
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y  L+ A + +   +EA+ + +E       PD +T+N +I+G+ + G V
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E    + S GC PD+++YN L+       +   G +L+ E+ F     P+ VTY+ 
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM-FSRGCEPNKVTYSI 317

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +IS  C+ G++D+A  +   M    + P   +++ LI    K G +  A  + + M+S G
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD+V +++++   C+NG  NQ L++ ++++G    PNV ++  +I+AL      + A 
Sbjct: 378 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 437

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  +    + P    YN +I   C+ G V+EA  ++ +ME+   +P  +++ I+++G 
Sbjct: 438 GMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C   R+ +AI +F +M+  GC P++ T   LI  +   G   EA  +
Sbjct: 498 CKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 193/409 (47%), Gaps = 38/409 (9%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           +++    SC +AGK + +   L        T    +   L+       N ++A  +  E 
Sbjct: 71  LMKLLNRSC-KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EI 128

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
              +++PD + +N +I G  ++  ++ A +    M + G  PDIVTYN +I  LC   ++
Sbjct: 129 LESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKL 188

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               ++L ++   +   P V+TYT +I      G +++A  +  EM + G+ P   T+N 
Sbjct: 189 GLALKVLDQLLLDNCM-PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 247

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           +I G  K G +  A  +   + S G  PDV++++ L+  +   G+ ++G KL  EM  + 
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             PN  T++ILI++LC+  R+++A   LK +   +L P  + Y+P+I   CK G +D A 
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP------------ 540
            I+  M    C PD V +  ++   C  G   +A+ IFNK+  +GC P            
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427

Query: 541 -----------------------DDITVNSLISCLLKGGMPNEAFRIMQ 566
                                  D+IT NSLISCL + G+  EA  ++ 
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLD 476



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 174/359 (48%), Gaps = 5/359 (1%)

Query: 212 GLLSQFRPGEVTMSTFMYN---SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           G+ ++ RP  +    F       LLN   K    +E++Y  +        PD      LI
Sbjct: 51  GVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLI 110

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +G      ++KA      + S    PD+  YN +ISG C+VN +    ++L  +K +  F
Sbjct: 111 KGFFNFKNIEKASRVMEILESH-TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARG-F 168

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD+VTY  +I   C   K+  A  + +++      P+ +T+ +LI+     G +  A  
Sbjct: 169 LPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 228

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + E ML+ G LPD+ T++++I G C+ G + +  +L   +  K   P+V ++ IL+ A  
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFL 288

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
            + + ++  + + ++      P    Y+ +I   C+ G +DEA  ++  M EK   PD  
Sbjct: 289 NQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 348

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++  LI   C +GR+  AI I + M+  GC PD +  N++++ L K G  N+A  I  +
Sbjct: 349 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNK 407


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 200/412 (48%), Gaps = 4/412 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+         +   M ++G+  +       +    ++G  DAA+ LL +  
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   Y +L++ L K     +A+   K   R   +PD  T+N LI GL     + 
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 279 KAFEFFYD-MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            A     + M   G  PD+VTYNT ISGLC+  ++ +G E+L+E+  +   SPDVVT+ S
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMD-RGGISPDVVTFCS 191

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG CK  ++D A  ++  M   G  P ++T+++++D   +   + + E + E M+  G
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +     T++ LI    R G +       ++         VYT    I ALC+  +   A+
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIG 516
             L  +  +  +P    YN VIDG CK+GNVD+A  +  +M +   CKPD + F  LI G
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371

Query: 517 HCMKGRMVEAISIFNKM-LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C  GR+ +A  +  +M  +  C PD +T N++I    K G   +A  +++ 
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEE 423



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 157/310 (50%), Gaps = 6/310 (1%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           M   +FRL    D   +N LI GL +  + + A E  + M + G    +VTY TLI GLC
Sbjct: 1   MASRHFRL----DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLC 56

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  ++     LL+++   +  +P+VVTYT++I G CK  +   A      M   G +P  
Sbjct: 57  KSGDLDAAQALLQKMA-DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDL 115

Query: 368 VTFNVLIDGFGKVGNMVSAEY-MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           VT+N LI G      M  A   ++E M+  G +PDVVT+++ I G C+ G+L++GL++ +
Sbjct: 116 VTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLE 175

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM    +SP+V TF  +I+ LCK NR++DA +  K +     VP    Y+ ++D   +A 
Sbjct: 176 EMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRAN 235

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +D    ++  M +        T+  LI      G +  A   + + +  GC  +  T N
Sbjct: 236 RLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHN 295

Query: 547 SLISCLLKGG 556
           + I  L + G
Sbjct: 296 AFIGALCRSG 305



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 136/277 (49%), Gaps = 2/277 (0%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D   YNTLI+GLC+  +     ELL  V   + +   VVTYT++I G CK G +D A  +
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELL-HVMAANGYDASVVTYTTLIDGLCKSGDLDAAQAL 67

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
             +M   G  P+ VT+  LIDG  K      A    +RML  G  PD+VT++SLI G C 
Sbjct: 68  LQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCM 127

Query: 415 NGQLNQ-GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
             +++  GL L + M      P+V T+   I+ LCK  +L+     L+++    + P   
Sbjct: 128 ANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            +  +I G CKA  +D+A  +   M E+ C PD +T++I++       R+     +   M
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++ G      T   LI  L++ G    A    ++A E
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAME 284



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 165/354 (46%), Gaps = 24/354 (6%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           LC+   P ++++ +KR+              +         TYN ++  LC     D   
Sbjct: 90  LCKARRPHDAIQTVKRM--------------LRSGCEPDLVTYNSLIHGLCMANRMDDAG 135

Query: 177 VVF-DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
           +V  + M   G +P+      F+S   +AGK D    +L +   G ++     + S+++ 
Sbjct: 136 LVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISG 195

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS---RIGEVKKAFEFFYDMGSFGC 292
           L K N  D+A  +FK        PD+ T++I++  LS   R+  V++  E     G +  
Sbjct: 196 LCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYAL 255

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           S    TY  LI  L R  ++        E   ++    +V T+ + I   C+ GK   A 
Sbjct: 256 S---ATYAPLIHALIRAGDIESA-SWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDG 411
            I   M   G  P+ +++N +IDG  K GN+  A  +  +ML  G   PDV+ F++LI G
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371

Query: 412 YCRNGQLNQGLKLCDEMKGKNLS-PNVYTFTILINALCKENRLNDARRFLKQLK 464
           +C+ G+L+Q  +L  EMK KN+  P+V T+  +I+   K   L  A+  L++++
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 1/210 (0%)

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S   +  A  +N LI G  K      A  +   M + GY   VVT+++LIDG C++G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L+    L  +M     +PNV T+T LI+ LCK  R +DA + +K++  +   P    YN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 478 VIDGFCKAGNVDEANVIVAE-MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
           +I G C A  +D+A +++ E M E    PD VT+   I G C  G++ + + +  +M R 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           G +PD +T  S+IS L K    ++AF++ +
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFK 210



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 6/262 (2%)

Query: 139 GLKFLE-FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           GL+ LE   R  +S +    T+  ++  LC+    D    VF  M   G +P+S      
Sbjct: 170 GLEMLEEMDRGGISPD--VVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIM 227

Query: 198 VSSCIRAGKCDAAKGLLSQF-RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
           + +  RA + D  + +L    + G   +S   Y  L++AL++  + + A + +++     
Sbjct: 228 LDNLSRANRLDTVEEVLEHMVKSGHYALSA-TYAPLIHALIRAGDIESASWAYEQAMEAG 286

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
              + +T N  I  L R G+   A      M   G  P++++YN +I GLC+   V    
Sbjct: 287 CVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAW 346

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI-KPSAVTFNVLID 375
           +L +++       PDV+ + ++ISG+CK G++ +A  +  EM +  I  P  VT+N +ID
Sbjct: 347 KLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMID 406

Query: 376 GFGKVGNMVSAEYMRERMLSFG 397
           G  K G++  A+ + E M + G
Sbjct: 407 GQSKFGSLKQAKLLLEEMQAVG 428


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 195/393 (49%), Gaps = 2/393 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++ ++++  CE+G  D    V   M   G  PN  +    +  C + G  +  K L  + 
Sbjct: 166 SFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKM 225

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V  + + Y  L+N   K     + + ++++       P+ +T+N +I      G++
Sbjct: 226 GELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKL 285

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AFE F +M   G + ++VTYNTLI GLC+   V     L+  +K +   SP++++Y +
Sbjct: 286 NNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK-RDGLSPNLISYNT 344

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC +G +DKA+ ++N+M S G  PS  T+N+LI GF +  N      M   M + G
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT++ L+D   R+  + +  ++   M+   L  ++Y + +LI+ LC    + +A 
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  K L    L P   +YN +I G+CK G+   A  ++ EM E    P+  ++   I   
Sbjct: 465 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQIL 524

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           C   +  EA  +   M+ +G  P  I++ ++IS
Sbjct: 525 CKDEKWTEAEVLLKDMIELGLKP-SISIWNMIS 556



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 184/346 (53%), Gaps = 5/346 (1%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
             ++ +++NA V+    ++A++ F +       P + TFN L+  L +    +KA+  F 
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +        D+ ++  +I G C V  + +G E+L +++ +   SP+VV YT++I G CK 
Sbjct: 155 ETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME-EMGLSPNVVVYTTLIDGCCKN 212

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G +++   ++ +M    +  +  T+ VLI+GF K+G       + E+M   G +P+V T+
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +S+I   C +G+LN   +L DEM+ + ++ NV T+  LI  LC+E R+ +A R + ++K 
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           + L P    YN +IDG+C  GN+D+A+ +  +M+     P   T+ ILI G         
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 392

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---MQRA 568
              +  +M   G +P  +T   L+  L++     +AF+I   M++A
Sbjct: 393 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKA 438



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 184/377 (48%), Gaps = 35/377 (9%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N+LL  L+K N  ++A  +F E  +   + D ++F I+I+G   +G + K FE    M 
Sbjct: 133 FNNLLILLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME 191

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK------------------FK----- 325
             G SP++V Y TLI G C+  ++ RG +L  ++                   FK     
Sbjct: 192 EMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKK 251

Query: 326 -----------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
                      +   P+V TY S+I   C  GK++ A  +++EM   G+  + VT+N LI
Sbjct: 252 DGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 311

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G  +   ++ AE +  RM   G  P+++++++LIDGYC  G L++   L ++MK    S
Sbjct: 312 GGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQS 371

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T+ ILI    +          +++++   L P    Y  ++D   ++ N+++A  I
Sbjct: 372 PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQI 431

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            + ME+     D   + +LI G C+ G M EA  +F  +  +   P+D+  N++I    K
Sbjct: 432 YSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCK 491

Query: 555 GGMPNEAFRIMQRASED 571
            G    A R+++   E+
Sbjct: 492 EGSSYRALRLLKEMGEN 508



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 179/366 (48%), Gaps = 1/366 (0%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +  C   G  D    +L Q     ++ +  +Y +L++   K  + +    +F +   L
Sbjct: 169 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 228

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
               + +T+ +LI G  ++G  K   E +  M   G  P++ TYN++I   C   ++   
Sbjct: 229 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 288

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            EL  E++ +   + +VVTY ++I G C+  ++ +A  +   M   G+ P+ +++N LID
Sbjct: 289 FELFDEMRERG-VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLID 347

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G+  +GN+  A  +  +M S G  P + T++ LI G+           +  EM+ + LSP
Sbjct: 348 GYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP 407

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +  T+TIL++AL + + +  A +    ++   LV   ++Y  +I G C  G++ EA+ + 
Sbjct: 408 SKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLF 467

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             ++E   KP+ V +  +I G+C +G    A+ +  +M   G  P+  + NS I  L K 
Sbjct: 468 KSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKD 527

Query: 556 GMPNEA 561
               EA
Sbjct: 528 EKWTEA 533



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 36/324 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++    +MGL      +++ M+  G +PN       +  C   GK + A  L  + 
Sbjct: 236 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 295

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V  +   YN+L+  L ++    EA  +     R    P+  ++N LI G   IG +
Sbjct: 296 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNL 355

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT- 336
            KA   F  M S G SP + TYN LI+G       A   ++++E++ +   SP  VTYT 
Sbjct: 356 DKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG-LSPSKVTYTI 414

Query: 337 ----------------------------------SVISGYCKLGKMDKATGIYNEMNSCG 362
                                              +I G C +G M +A+ ++  ++   
Sbjct: 415 LMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMH 474

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +KP+ V +N +I G+ K G+   A  + + M   G +P+V +++S I   C++ +  +  
Sbjct: 475 LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAE 534

Query: 423 KLCDEMKGKNLSPNVYTFTILINA 446
            L  +M    L P++  + ++  A
Sbjct: 535 VLLKDMIELGLKPSISIWNMISKA 558


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 190/386 (49%), Gaps = 5/386 (1%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G   N+      +++ ++A + + A  LL +        +  MY +++N   K    D+A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             +  E      + D    + LIQGL R G + +A E F  MG   CSP+++TYNT+++G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNG 189

Query: 306 LCRVNEVARGHELLKEVKFKSEFS----PDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LC+ N +    EL  +++ + E S    PDV++Y++VI   CK  ++DKA   +  M + 
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G  P+ VT++ LIDG  KV        +   M   G+  +++ F++++    +N +  + 
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +  + +      PNV T+ + ++ LCK  R+++A R L ++  + + P    Y+ +IDG
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           FCKAG +D+A+ +   M    C P  VTF  L+ G     +  EA  +   M+  G  P 
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 429

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQR 567
             T N L+ C+        A  I  +
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHK 455



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 209/416 (50%), Gaps = 11/416 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFD-----YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           TYN V+  LC+    D    +FD     Y  S G  P+       + +  +A + D A  
Sbjct: 182 TYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 241

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              + R      +   Y+SL++ L K +   E + +           +   FN ++  L 
Sbjct: 242 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALW 301

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +  E +KA +FF  +   G  P++VTYN  + GLC+   V   + +L E+  +S+ +PDV
Sbjct: 302 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEM-VESKVTPDV 360

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TY+S+I G+CK G+MDKA  ++  M      P  VTF  L+ GF +      A  + E 
Sbjct: 361 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 420

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M++ G++P + T++ L+D  C    +   L++  +MK K   P+  T+  LI  LC+  R
Sbjct: 421 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARR 480

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A+ FL  ++ +++VP   + + +++  CK G VDEA  ++  + E  C+P   TF I
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKI 540

Query: 513 LIIGHCMKGRMVEAISIFNKMLRI-GCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           L+    ++ +   A    +K+LR  G   D  T +  ++ + K G P+EA  ++++
Sbjct: 541 LVEELYLRKKWEAA----SKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQ 592



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 227/502 (45%), Gaps = 49/502 (9%)

Query: 116 YLCEKL-------SPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
           YLC  L       +P  +  V++++++P +   F +++       H+  T  +++ +  +
Sbjct: 29  YLCRDLAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVK 88

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
              H+    +          PN  M    ++   +AG+ D A  LL + +   V M   +
Sbjct: 89  AKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLL 148

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM- 287
           +++L+  L ++   DEA+  FK      S P+  T+N ++ GL +   + +A E F DM 
Sbjct: 149 HSTLIQGLCRKGRIDEALEQFKSMGEECS-PNVITYNTVVNGLCKANRIDEALELFDDME 207

Query: 288 ----GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
                S GC PD+++Y+T+I  LC+   V + +E  K ++     +P+VVTY+S+I G C
Sbjct: 208 KRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVG-CAPNVVTYSSLIDGLC 266

Query: 344 KLGK-----------------------------------MDKATGIYNEMNSCGIKPSAV 368
           K+ +                                    +KA   +  +   G KP+ V
Sbjct: 267 KVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 326

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+NV + G  K G +  A  +   M+     PDV+T+SS+IDG+C+ G++++   +   M
Sbjct: 327 TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 386

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                 P+  TF  L++   +  +  +A R  + +     +P    YN ++D  C A +V
Sbjct: 387 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 446

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           + A  I  +M+ K+ +PD  T+  LI   C   R+ EA    + M      P+    ++L
Sbjct: 447 ESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 506

Query: 549 ISCLLKGGMPNEAFRIMQRASE 570
           +  L K G  +EA  ++    E
Sbjct: 507 VEVLCKQGEVDEACSVLDNVVE 528



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 183/440 (41%), Gaps = 18/440 (4%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           LC+   P   LE++  +     G+  ++F              N ++ +L +    +   
Sbjct: 265 LCKVDRPSECLELLLHMKEKGFGINIIDF--------------NAMLHALWKNDEQEKAC 310

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
             F+ +   G  PN       V    +AG+ D A  +L +    +VT     Y+S+++  
Sbjct: 311 QFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGF 370

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K    D+A  +F         P   TF  L+ G S   + ++AF    DM + G  P +
Sbjct: 371 CKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGL 430

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            TYN L+  +C  + V    E+  ++K K    PD  TY  +I   C+  ++D+A    +
Sbjct: 431 QTYNVLMDCVCGADSVESALEIYHKMKRKKR-QPDCNTYAPLIQCLCRARRVDEAKEFLD 489

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M +  + P+    + L++   K G +  A  + + ++  G  P   TF  L++      
Sbjct: 490 VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRK 549

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           +     KL   ++      +  T+++ +  +CK  + ++A   ++Q+    + P    Y 
Sbjct: 550 KWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYV 606

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            V+   C    V+ A     +M  + C P  VT+T+LI   C      EA  IF  M+  
Sbjct: 607 AVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAA 666

Query: 537 GCAPDDITVNSLISCLLKGG 556
           G  P   T+ +L SCL   G
Sbjct: 667 GFTPQAQTMRTLSSCLRDAG 686



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 162/320 (50%), Gaps = 12/320 (3%)

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHELL 319
           T T  +  + L ++ +   A+ FF   G+  G   +  T   L++   +       H LL
Sbjct: 40  TVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLL 99

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           KE + +    P+ + YT+VI+G+CK G++D+A  + +EM   G+K   +  + LI G  +
Sbjct: 100 KE-ELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCR 158

Query: 380 VGNMVSAEYMRERMLSFGY--LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-----N 432
            G +  A    E+  S G    P+V+T++++++G C+  ++++ L+L D+M+ +      
Sbjct: 159 KGRIDEA---LEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHG 215

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             P+V +++ +I+ALCK  R++ A  + K+++     P    Y+ +IDG CK     E  
Sbjct: 216 CEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECL 275

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++  M+EK    + + F  ++          +A   F ++L+ G  P+ +T N  +  L
Sbjct: 276 ELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGL 335

Query: 553 LKGGMPNEAFRIMQRASEDQ 572
            K G  +EA+RI+    E +
Sbjct: 336 CKAGRVDEAYRILLEMVESK 355


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 209/437 (47%), Gaps = 19/437 (4%)

Query: 152 LNHSFKTYNLVMRSL-CEMGLHDSVQV---------------VFDYMRSDGHL--PNSPM 193
            NH+ ++Y +V   L C    +D+  +               VFD + S  ++  P   +
Sbjct: 6   FNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGV 65

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
            +   S  I  G  + A    S+ +   V   T   N LL+   K    D     FK+  
Sbjct: 66  FDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 125

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
              S+P  +T+NI+I  + + G+++ A   F +M   G  PD VTYN++I G  +V  + 
Sbjct: 126 GAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
                 +E+K  S   PDV+TY S+I+ +CK GK+ K    Y EM   G+KP+ V+++ L
Sbjct: 186 DTVYFFEEMKSMS-CEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +D F K   M  A      M   G++P+  T++SL+D  C+ G L+   +L +EM    +
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
             NV T+T LI+ LC   R+ +A +   ++    ++P    YN +I GF KA N+D A  
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ E++ +  +PD + +   I G C   ++  A  + N+M   G   + +   +L+    
Sbjct: 365 LLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYF 424

Query: 554 KGGMPNEAFRIMQRASE 570
           K G P E   +++   E
Sbjct: 425 KSGNPTEGLHLLEEMQE 441



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 201/420 (47%), Gaps = 1/420 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F  ++ +   L ++G+ +     F  M+     P +      +    + GK D  K    
Sbjct: 63  FGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFK 122

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                    + F YN +++ + K+ + + A  +F+E       PDT T+N +I G  ++G
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVG 182

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +     FF +M S  C PD++TYN+LI+  C+  ++ +G E  +E+K +S   P+VV+Y
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMK-QSGLKPNVVSY 241

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           ++++  +CK   M +A   Y +M   G  P+  T+  L+D   K+GN+  A  +   ML 
Sbjct: 242 STLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLE 301

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   +VVT+++LIDG C   ++ +  KL  +M    + PN+ ++  LI+   K   ++ 
Sbjct: 302 VGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDR 361

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L +LK   + P   +Y   I G C    ++ A V++ EM+E   K + + +T L+ 
Sbjct: 362 ALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMD 421

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +   G   E + +  +M  +      +T   LI  L K  + ++A     R S D  LQ
Sbjct: 422 AYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQ 481



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 202/433 (46%), Gaps = 16/433 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGL 213
           TYN ++   C+ G        +  M+  G  PN    S +++ F   C       A K  
Sbjct: 205 TYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAF---CKEDMMQQAIKFY 261

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           +   R G V  + F Y SL++A  K  N  +A  +  E   +  + +  T+  LI GL  
Sbjct: 262 VDMRRVGHVP-NEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCD 320

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              +K+A + F  M + G  P++ +YN LI G  +   + R  ELL E+K +    PD++
Sbjct: 321 AERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IQPDLL 379

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y + I G C L K++ A  + NEM   GIK + + +  L+D + K GN     ++ E M
Sbjct: 380 LYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCKENR 452
               +   VVTF  LIDG C+N  +++ +     M     L PN   +T +I+ LCKEN+
Sbjct: 440 QELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQ 499

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A    +Q+    LVP    Y  ++DG  K GN+ EA  +  +M E   K D + +T 
Sbjct: 500 VKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTS 559

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM------Q 566
           L+ G     ++ +A S   +M+     PD++    ++    + G  +EA  +       Q
Sbjct: 560 LVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQ 619

Query: 567 RASEDQNLQLPSW 579
             + D N  LP++
Sbjct: 620 LLTSDNNNALPNY 632


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 182/387 (47%), Gaps = 1/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +++ LC+ G  +    +   M+  G  P +      V    R  K + A+ +L++ 
Sbjct: 232 THAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +         ++NA  ++     AV +F+       +P+ WT+N ++QG    G+V
Sbjct: 292 FDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKV 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      M   G  PD+VTYN LI G C    +     LL+ ++  +  + D  TY  
Sbjct: 352 YKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLME-GNGLAADQYTYNV 410

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK GK+D+A  +++ +   GI+P++VTFN +I+G  K G    A    E M+S G
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAG 470

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y PD  T+S  I+  C+     +GL   DEM  K++ P+   +TI+IN L  E     A 
Sbjct: 471 YAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLAT 530

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R   Q+      P    Y   +  +C  G +DEA  +V EM++ R   D + +  LI GH
Sbjct: 531 RIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGH 590

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDIT 544
              G+   A++I   M  +   P+  T
Sbjct: 591 TSIGQTDRAVTILKHMTGVASMPNHFT 617



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 170/334 (50%), Gaps = 6/334 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           + SLL    +       + +F   +R     P   T+N LI+ L R  +++ A  +   M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  PD  T+N+LI G CR  ++   H+L  ++ F+  FS D V+Y ++I G+C+ G+
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRG-FSQDAVSYAALIEGFCEAGR 214

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D+A  ++ EM     +P   T   L+ G    G       M ++M   G+ P    +++
Sbjct: 215 IDEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAA 270

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+D +CR  +  +  K+ +EM    L P V T TI++NA C+E R++ A R  + +++  
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P  + YN ++ GFC AG V +A  ++ +M E   +PD VT+ +LI G C+ G +  A 
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +   M   G A D  T N LI  L K G  +EA
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 194/439 (44%), Gaps = 40/439 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++R+LC        Q     M   G  P++      +    R  + + A  L  + 
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKM 190

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +     Y +L+    +    DEA+ +F+E     +QPD +T   L++GL   G  
Sbjct: 191 PFRGFSQDAVSYAALIEGFCEAGRIDEALELFRE----MTQPDMYTHAALVKGLCDAGRG 246

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++       M   G  P    Y  L+   CR  +     ++L E+ F S   P VVT T 
Sbjct: 247 EEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEM-FDSGLMPCVVTCTI 305

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V++ YC+ G+M  A  ++  M   G +P+  T+N ++ GF   G +  A  + ++M   G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT++ LI G C +G +    +L   M+G  L+ + YT+ +LI+ALCK  ++++A 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-----NVIVA---------------- 496
                L++  + P    +N VI+G CKAG  D A     N+I A                
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENL 485

Query: 497 --------------EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
                         EM +K  KP  V +TI+I     +     A  I+ +M+  GC+PD 
Sbjct: 486 CKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDV 545

Query: 543 ITVNSLISCLLKGGMPNEA 561
           +T  + +      G  +EA
Sbjct: 546 VTYTTSVRAYCNEGRLDEA 564



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 186/417 (44%), Gaps = 15/417 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG----- 212
           +Y  ++   CE G  D    +F  M            + +  + +  G CDA +G     
Sbjct: 201 SYAALIEGFCEAGRIDEALELFREMTQP---------DMYTHAALVKGLCDAGRGEEGLC 251

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +L + +      +T  Y +L++   ++  A+EA  +  E F     P   T  I++    
Sbjct: 252 MLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYC 311

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R G +  A   F  M   GC P++ TYN ++ G C   +V +   LL +++ +    PDV
Sbjct: 312 REGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR-ECGVEPDV 370

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY  +I G C  G +  A  +   M   G+     T+NVLID   K G +  A  + + 
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           +   G  P+ VTF+++I+G C+ G+ +      + M     +P+ YT++  I  LCK   
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
             +   F+ ++   D+ P    Y  VI+      N   A  I  +M  + C PD VT+T 
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTT 550

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            +  +C +GR+ EA ++  +M +     D +  N+LI      G  + A  I++  +
Sbjct: 551 SVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMT 607



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 184/440 (41%), Gaps = 18/440 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C  G       + D MR  G  P+       +      G   +A  LL   
Sbjct: 337 TYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM 396

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + YN L++AL K    DEA  +F        +P++ TFN +I GL + G+ 
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  F  +M S G +PD  TY+  I  LC+      G   + E+  + +  P  V YT 
Sbjct: 457 DVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEM-LQKDVKPSTVNYTI 515

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+          AT I+ +M S G  P  VT+   +  +   G +  AE +   M    
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI------------- 444
            + D + +++LIDG+   GQ ++ + +   M G    PN +TF IL+             
Sbjct: 576 TIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVP 635

Query: 445 ---NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
               ++ K   L D     + +K N +      Y  +++GF +   +DE   +V+ M+E+
Sbjct: 636 LKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEE 695

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               ++  +  L+   C      +A ++   M+  G  P+ I    L+S L   G  + A
Sbjct: 696 NLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRA 755

Query: 562 FRIMQRAS-EDQNLQLPSWK 580
             I + +  ++ N     WK
Sbjct: 756 KEIFRSSRWKEYNTDEIVWK 775



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 167/413 (40%), Gaps = 64/413 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ +LC+ G  D    +FD +   G  PNS      ++   +AGK D A   L   
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T+ Y+  +  L K   + E ++   E  +   +P T  + I+I  L      
Sbjct: 467 ISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNY 526

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   +  M S GCSPD+VTY T +   C    +     ++ E+K K     D + Y +
Sbjct: 527 GLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMK-KCRTIVDAMAYNT 585

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKP-------------------------------- 365
           +I G+  +G+ D+A  I   M      P                                
Sbjct: 586 LIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTI 645

Query: 366 -------------------SAVTFNVLIDGFGK------VGNMVSAEYMRERMLSFGYLP 400
                              SA T+  +++GF +      V ++VS   M+E  L      
Sbjct: 646 ELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVS--LMKEENLPLN--E 701

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D+  +++L++ +C+    +    L   M G    PN+  +  L++ L  E + + A+   
Sbjct: 702 DI--YNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIF 759

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +  +W +      ++  +IDGF + G+ D  + +++ +E+ +CKP   T+ +L
Sbjct: 760 RSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAML 812



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 4/242 (1%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P   TY ++I   C+   +  A    + M   G +P A TFN LI G+ +   +  A  
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M   G+  D V++++LI+G+C  G++++ L+L  EM      P++YT   L+  LC
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLC 241

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              R  +    L+++K     P    Y  ++D +C+    +EA  I+ EM +    P  V
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T TI++  +C +GRM  A+ +F  M   GC P+  T N+++      G   +A  ++ + 
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 569 SE 570
            E
Sbjct: 362 RE 363



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 86/409 (21%), Positives = 157/409 (38%), Gaps = 42/409 (10%)

Query: 65  AIAHFHGLANGGSRPFD---EKEVNYRC-SNEFWFVKVVCTLL---LRSSYLSDTCARYL 117
           A + F GL   G RP        +N  C + +F    V CT L   + + Y  DT     
Sbjct: 424 ACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF---DVACTFLENMISAGYAPDT----- 475

Query: 118 CEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
               SP   +E + +    + GL F++   +   +  S   Y +V+  L     +     
Sbjct: 476 -YTYSPF--IENLCKTKGSQEGLFFID-EMLQKDVKPSTVNYTIVINRLFNERNYGLATR 531

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           ++  M S G  P+       V +    G+ D A+ ++++ +     +    YN+L++   
Sbjct: 532 IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHT 591

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILI----------------QGLSRIGEVKKAF 281
                D AV + K    + S P+ +TF IL+                  + +  E+   F
Sbjct: 592 SIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVF 651

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           E F  M          TY +++ G     R++EV     L+KE       + D+  Y ++
Sbjct: 652 ELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLP--LNEDI--YNAL 707

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ++ +CKL     A  +   M   G  P+ + +  L+ G    G    A+ +        Y
Sbjct: 708 VNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEY 767

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
             D + +  +IDG+ R G  +    +   ++     P+  T+ +L   L
Sbjct: 768 NTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 203/417 (48%), Gaps = 11/417 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++RSLC  GL      V D M   G     PM    + +  R G   +A   L   
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR---- 273
                T+ +   N +++A+ +Q   DE V + ++      +PD  ++N +++GL      
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRW 229

Query: 274 ------IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
                 + E+ +  E    M   GC+PD+  Y T+I G+C+       +++L  +     
Sbjct: 230 DDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG- 288

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+VV Y +V+ G C   + ++A  +  EM         VTFN+L+D F + G +    
Sbjct: 289 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 348

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E+ML  G +PDV+T++++I+G+C+ G +++ + L   M      PN  ++TI++  L
Sbjct: 349 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGL 408

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+  R  DA+  +  +     +P P  +N +I+  CK G  ++A  ++ +M    C PD 
Sbjct: 409 CRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDL 468

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ++++ +I G    G+  EA+ + N M+  G  P+ I  +S+ S L + G  ++  ++
Sbjct: 469 ISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 525



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 180/386 (46%), Gaps = 11/386 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVV----------FDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +YN V++ LC     D V+ +             M   G  P+  M    +    + G  
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 274

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  +LS+     +  +   YN++L  L      +EA  +  E F+     D  TFNIL
Sbjct: 275 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 334

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +    + G V +  E    M   GC PD++TY T+I+G C+   V     LLK +     
Sbjct: 335 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS-ACG 393

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ ++YT V+ G C+  +   A  + + M   G  P+ VTFN LI+   K G    A 
Sbjct: 394 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAI 453

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + ++ML  G  PD++++S++IDG  + G+  + L+L + M  K ++PN   ++ + +AL
Sbjct: 454 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 513

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            +E R +   +    ++   +     +YN VI   CK    D A    A M    C P++
Sbjct: 514 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 573

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKM 533
            T+TILI G   +G + EA  + +++
Sbjct: 574 STYTILIRGLASEGLVREAQDLLSEL 599



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 215/468 (45%), Gaps = 32/468 (6%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKT-------YNLVMRSLCEMG-LH 172
           L+P NS  +   L  P    K    + V++S   +           + ++RSLC  G   
Sbjct: 2   LAPPNSQMLTSSLPAPATKPKPAAATSVSVSAAATAPLDAGGSGRLSALIRSLCAAGRTA 61

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM--STFMYN 230
           D+ + +     + G +  + MI         AG C A +   ++     V +  + + Y 
Sbjct: 62  DAARALDTAGDAAGVVAYNAMI---------AGYCRAGQVAAARRLAAAVPVPPNAYTYF 112

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            ++ +L  +    +A+ +  E             +++++   R G  + A      + + 
Sbjct: 113 PIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAK 172

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMD 349
           GC+ D    N ++S +C    V  G ELL+++  F  E  PD+V+Y +V+ G C   + D
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCE--PDIVSYNAVLKGLCMAKRWD 230

Query: 350 KATGIYNEMNSC----------GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
               +  EM             G  P    +  +IDG  K G+   A  +  RM S+G  
Sbjct: 231 DVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 290

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+VV +++++ G C   +  +   L  EM  ++   +  TF IL++  C+   ++     
Sbjct: 291 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 350

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L+Q+  +  +P    Y  VI+GFCK G VDEA +++  M    CKP+ +++TI++ G C 
Sbjct: 351 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCR 410

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             R V+A  + + M++ GC P+ +T N+LI+ + K G+  +A  ++++
Sbjct: 411 AERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQ 458



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 175/387 (45%), Gaps = 11/387 (2%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNH--------SFKTYNLVMRSLCEMGLHDSV 175
           L  L + KR D+  +    +E  RV+ +L+           + Y  ++  +C+ G H+  
Sbjct: 220 LKGLCMAKRWDD--VEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 277

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
             +   M S G  PN       +     A + + A+ LL++    +  +    +N L++ 
Sbjct: 278 NDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDF 337

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
             +    D  + + ++       PD  T+  +I G  + G V +A     +M + GC P+
Sbjct: 338 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 397

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
            ++Y  ++ GLCR        EL+  +  +    P+ VT+ ++I+  CK G  ++A  + 
Sbjct: 398 TISYTIVLKGLCRAERWVDAQELISHM-IQQGCLPNPVTFNTLINFMCKKGLAEQAIELL 456

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            +M   G  P  ++++ +IDG GK G    A  +   M++ G  P+ + +SS+     R 
Sbjct: 457 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 516

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G+ ++ +++ D ++   +  +   +  +I++LCK    + A  F   +  N  +P    Y
Sbjct: 517 GRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 576

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKR 502
             +I G    G V EA  +++E+  +R
Sbjct: 577 TILIRGLASEGLVREAQDLLSELCSRR 603



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 145/351 (41%), Gaps = 52/351 (14%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            + LI+ L   G    A       G    +  +V YN +I+G CR  +VA    L   V 
Sbjct: 47  LSALIRSLCAAGRTADAARALDTAGD---AAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKP---------------- 365
                 P+  TY  ++   C  G +  A  + +EM    C   P                
Sbjct: 104 VP----PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGF 159

Query: 366 -SAV----------------TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            SAV                  N+++    + G +     +  ++ SFG  PD+V+++++
Sbjct: 160 RSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAV 219

Query: 409 IDGYCRNGQLNQGLKLCDEM----------KGKNLSPNVYTFTILINALCKENRLNDARR 458
           + G C   + +   +L  EM               +P++  +  +I+ +CK+     A  
Sbjct: 220 LKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAND 279

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L ++    L P    YN V+ G C A   +EA  ++AEM ++ C  D VTF IL+   C
Sbjct: 280 ILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 339

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
             G +   I +  +ML  GC PD IT  ++I+   K G+ +EA  +++  S
Sbjct: 340 QNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 84/182 (46%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  +C+ GL +    +   M  +G  P+       +    +AGK + A  LL+  
Sbjct: 435 TFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 494

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T +T +Y+S+ +AL ++   D+ + MF        + D   +N +I  L +  E 
Sbjct: 495 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWET 554

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +FF  M S GC P+  TY  LI GL     V    +LL E+  +      +V +  
Sbjct: 555 DRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRHFG 614

Query: 338 VI 339
           ++
Sbjct: 615 IV 616


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 205/434 (47%), Gaps = 35/434 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++  M SLC+ G     + +F YM + GH+P+       +      G+      L    
Sbjct: 339 TFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSM 398

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +    N L++A  K+   DEA+ +F E      +P+  T++ LI    R+G +
Sbjct: 399 ADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M S G  P+   Y++LI G C   ++ +  E + E+  K    P++V ++S
Sbjct: 459 ADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSS 518

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C  G++  A  ++N +   G +P+ VTFN LIDG+  VG M  A  + + M+S G
Sbjct: 519 IIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 578

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT ++L+ GYC++G+++ GL L  EM  K + P   T+ I+++ L +  R + A+
Sbjct: 579 IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAK 638

Query: 458 R-------------------FLKQLKWNDLVPKPF----------------MYNPVIDGF 482
           +                    LK L  NDL  +                  + N +I+  
Sbjct: 639 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K    +EAN + A +      P+  T+ ++I     +G + EA ++F+ M + GCAP  
Sbjct: 699 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758

Query: 543 ITVNSLISCLLKGG 556
             +N +I  LL+ G
Sbjct: 759 RLLNDIIRMLLQKG 772



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 4/352 (1%)

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-YMFKEYFRLYSQP 259
           C RA + D     +++     +   T    + L  L      DEAV  +      L   P
Sbjct: 134 CCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVP 193

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISGLCRVNEVARGHE 317
           D  ++N +I+ L      ++A +    M   G  CSPD+V++NT+I G  +  EV++   
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 253

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E+  K    PDV TY S++   CK   MDKA  +  +M   G++P  VT+N +I G+
Sbjct: 254 LFNEMVQKG-VVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY 312

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
              G+   +  M  +M S G +PD VTFSS +   C++G+     ++   M  K   P++
Sbjct: 313 SCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDI 372

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            +++IL++    E R  D       +    +V      N +I    K G +DEA ++  E
Sbjct: 373 VSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTE 432

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           M+ +  +P+ VT++ LI   C  GR+ +A+  F++M+ IG  P+    +SLI
Sbjct: 433 MQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLI 484



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 190/375 (50%), Gaps = 39/375 (10%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           YN+++ +L   + + EA+ M +   +   +  PD  +FN +I G  + GEV KA   F +
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  PD+ TYN+++  LC+   + +   +L+++  K    PD VTY ++I GY   G
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG-VEPDGVTYNAIIHGYSCSG 316

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
              ++  ++ +M S G+ P  VTF+  +    K G    AE + + M + G++PD+V++S
Sbjct: 317 HWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYS 376

Query: 407 SLIDGY-----------------------------------CRNGQLNQGLKLCDEMKGK 431
            L+ GY                                    + G +++ + +  EM+G+
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
            + PNV T++ LI+A C+  RL DA     Q+    + P   +Y+ +I GFC  G++ +A
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKA 496

Query: 492 NVIVAEMEEKRC-KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              ++EM  K   +P+ V F+ +I   C++GR+++A  +FN ++ IG  P  +T NSLI 
Sbjct: 497 KEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLID 556

Query: 551 CLLKGGMPNEAFRIM 565
                G   +AF ++
Sbjct: 557 GYCLVGKMEKAFGVL 571



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 212/483 (43%), Gaps = 74/483 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           +YN V++SLC          +   M  +G   +  ++ F   +    + G+   A  L +
Sbjct: 197 SYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFN 256

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     V      YNS+++AL K    D+A ++ ++      +PD  T+N +I G S  G
Sbjct: 257 EMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSG 316

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             K++ + F  M S G  PD VT+++ +S LC+        E+ + +  K    PD+V+Y
Sbjct: 317 HWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHM-PDIVSY 375

Query: 336 TSVISGYC-----------------------------------KLGKMDKATGIYNEMNS 360
           + ++ GY                                    K G MD+A  ++ EM  
Sbjct: 376 SILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQG 435

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G++P+ VT++ LI  F ++G +  A     +M+S G  P+   + SLI G+C +G L +
Sbjct: 436 QGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVK 495

Query: 421 GLKLCDEMKGKNLS-PNVYTFTILINALCKENRLNDARRFLKQL----------KWNDLV 469
             +   EM  K L  PN+  F+ +I++LC E R+ DA+     +           +N L+
Sbjct: 496 AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLI 555

Query: 470 -------------------------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
                                    P     N ++ G+CK+G +D+  ++  EM  K+ K
Sbjct: 556 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVK 615

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P  VT+ I++ G    GR   A  +F++M+  G A D  T   L+  L +  + +EA  +
Sbjct: 616 PTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITL 675

Query: 565 MQR 567
             +
Sbjct: 676 FHK 678



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 176/368 (47%), Gaps = 2/368 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N+++ +  + G+ D   +VF  M+  G  PN       +S+  R G+   A    SQ   
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGEVK 278
             +  +T +Y+SL++      +  +A     E   +   +P+   F+ +I  L   G V 
Sbjct: 471 IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A + F  +   G  P IVT+N+LI G C V ++ +   +L +        PDVVT  ++
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL-DAMVSVGIEPDVVTNNTL 589

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +SGYCK GK+D    ++ EM    +KP+ VT+N+++DG  + G   +A+ M   M+  G 
Sbjct: 590 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGT 649

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             D+ T+  L+ G CRN   ++ + L  ++   +   ++     +INAL K  R  +A  
Sbjct: 650 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEAND 709

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               +  + LVP    Y  +I    K G+V+EA+ + + ME+  C P       +I    
Sbjct: 710 LFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 769

Query: 519 MKGRMVEA 526
            KG +V+A
Sbjct: 770 QKGDIVKA 777



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 133/304 (43%), Gaps = 2/304 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL+    R         F   +   G     +   T +  LC         ++L   
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK--PSAVTFNVLIDGFGKV 380
             +    PD ++Y +VI   C   +  +A  +   M   G +  P  V+FN +I GF K 
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  +   M+  G +PDV T++S++D  C+   +++   +  +M  K + P+  T+
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             +I+         ++ +  +++    L+P    ++  +   CK G   +A  I   M  
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTT 365

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K   PD V+++IL+ G+  +GR  +  ++F+ M   G   +   +N LIS   K GM +E
Sbjct: 366 KGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDE 425

Query: 561 AFRI 564
           A  +
Sbjct: 426 AMLV 429



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 135/327 (41%), Gaps = 27/327 (8%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D+A ++F E  R  +     + N  +  L+R  +            S  CS        L
Sbjct: 59  DDAHHLFDELLRQGTPVHNRSLNDFLAALARAPD------------SVSCSNGPALVLAL 106

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
            + +CR     R   L             V TY  ++   C+  + D        +   G
Sbjct: 107 FNRICREEAGPRVAPL------------TVRTYGILMDCCCRARRPDLGPAFVARLLRAG 154

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           +K   +     +           A + +  RM     +PD ++++++I   C + +  + 
Sbjct: 155 LKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEA 214

Query: 422 LKLCDEM--KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           L +   M  +G   SP+V +F  +I+   K+  ++ A     ++    +VP    YN ++
Sbjct: 215 LDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIV 274

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CKA  +D+A  ++ +M +K  +PD VT+  +I G+   G   E+  +F KM   G  
Sbjct: 275 DALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLI 334

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
           PD +T +S +S L K G   +A  I Q
Sbjct: 335 PDTVTFSSFMSSLCKHGRSKDAEEIFQ 361



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 3/169 (1%)

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR-FL 460
           V T+  L+D  CR  + + G      +    L       T  +  LC   R ++A    L
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPDKVTFTILIIGHC 518
            ++     VP    YN VI   C      EA  +V  M  E  RC PD V+F  +I G  
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +G + +A ++FN+M++ G  PD  T NS++  L K    ++A  ++++
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQ 292



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 106/277 (38%), Gaps = 36/277 (12%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ +     T N ++   C+ G  D   ++F  M      P +      +   +RAG+ 
Sbjct: 575 VSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRT 634

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            AAK +  +       +    Y  LL  L + +  DEA+ +F                  
Sbjct: 635 SAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF------------------ 676

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
                            + +G+  C  DI   NT+I+ L +V      ++L   +   S 
Sbjct: 677 -----------------HKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIS-TSG 718

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+V TY  +I    K G +++A  +++ M   G  PS+   N +I    + G++V A 
Sbjct: 719 LVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAG 778

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           Y   ++       +  T S L+  +   G+  + +K 
Sbjct: 779 YYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 815



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 1/98 (1%)

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF-NKM 533
           Y  ++D  C+A   D     VA +     K   +  T  +   C   R  EA+ +  ++M
Sbjct: 127 YGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRM 186

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             + C PD I+ N++I  L       EA  ++QR +++
Sbjct: 187 SELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKE 224


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 203/413 (49%), Gaps = 15/413 (3%)

Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG-------- 212
           +++ LC +    D++ +V   M   G +PN      F  + +  G CD  +         
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPN-----VFSYNILLKGLCDENRSQEALELLH 182

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +++  R G        Y +++N   K+ ++D+A   + E       PD  T+N +I  L 
Sbjct: 183 MMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALC 242

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   + KA E    M   G  PD +TYN+++ G C   +       LK+++      PDV
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR-SDGVEPDV 301

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY+ ++   CK G+  +A  I++ M   G+KP   T+  L+ G+   G +V    + + 
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G  PD   FS LI  Y + G+++Q + +  +M+ + L+PN  T+  +I  LCK  R
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           + DA  + +Q+    L P   +YN +I G C     + A  ++ EM ++    + + F  
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +I  HC +GR++E+  +F  M+RIG  P+ IT N+LI+     G  +EA +++
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 198/413 (47%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V+    + G  D     +  M   G LP+       +++  +A   D A  +L+  
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      YNS+L+         EA+   K+      +PD  T+++L+  L + G  
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M   G  P+I TY TL+ G      +   H LL ++  ++   PD   ++ 
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL-DLMVRNGIHPDHYVFSI 376

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y K GK+D+A  ++++M   G+ P+AVT+  +I    K G +  A    E+M+  G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + ++SLI G C   +  +  +L  EM  + +  N   F  +I++ CKE R+ ++ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  + +    + P    YN +I+G+C AG +DEA  +++ M     KP+ VT++ LI G+
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C   RM +A+ +F +M   G +PD IT N ++  L +      A  +  R +E
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 183/404 (45%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G           MRSDG  P+       +    + G+C  A+ +    
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +LL     +    E   +     R    PD + F+ILI   ++ G+V
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G +P+ VTY  +I  LC+   V     L  E       SP  + Y S
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM-LYFEQMIDEGLSPGNIVYNS 446

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   K ++A  +  EM   GI  + + FN +ID   K G ++ +E + E M+  G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V+T+++LI+GYC  G++++ +KL   M    L PN  T++ LIN  CK +R+ DA 
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+++ + + P    YN ++ G  +      A  +   + E   + +  T+ I++ G 
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C      +A+ +F  +  +    +  T N +I  LLK G  +EA
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 3/345 (0%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           EVT     Y  L+    +    D          +   + D   F  L++GL        A
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 281 FEF-FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTS 337
            +     M   GC P++ +YN L+ GLC  N      ELL  +         PDVV+YT+
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+ K G  DKA   Y+EM   GI P  VT+N +I    K   M  A  +   M+  G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD +T++S++ GYC +GQ  + +    +M+   + P+V T+++L++ LCK  R  +AR
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    L P+   Y  ++ G+   G + E + ++  M      PD   F+ILI  +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             +G++ +A+ +F+KM + G  P+ +T  ++I  L K G   +A 
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 198/426 (46%), Gaps = 2/426 (0%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
            PK  + FL+  R +  +     TY+L+M  LC+ G     + +FD M   G  P     
Sbjct: 281 QPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              +      G      GLL       +    ++++ L+ A  KQ   D+A+ +F +  +
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               P+  T+  +I  L + G V+ A  +F  M   G SP  + YN+LI GLC  N+  R
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             EL+ E+        + + + S+I  +CK G++ ++  ++  M   G+KP+ +T+N LI
Sbjct: 460 AEELILEM-LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+   G M  A  +   M+S G  P+ VT+S+LI+GYC+  ++   L L  EM+   +S
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T+ I++  L +  R   A+    ++  +    +   YN ++ G CK    D+A  +
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              +     K +  TF I+I      GR  EA  +F      G  P+  T   +   ++ 
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698

Query: 555 GGMPNE 560
            G+  E
Sbjct: 699 QGLLEE 704



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 191/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +LC+    D    V + M  +G +P+       +     +G+   A G L + 
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      Y+ L++ L K     EA  +F    +   +P+  T+  L+QG +  G +
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +       M   G  PD   ++ LI    +  +V +   +  +++ +   +P+ VTY +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR-QQGLNPNAVTYGA 411

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI   CK G+++ A   + +M   G+ P  + +N LI G         AE +   ML  G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + + F+S+ID +C+ G++ +  KL + M    + PNV T+  LIN  C   ++++A 
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L  +    L P    Y+ +I+G+CK   +++A V+  EME     PD +T+ I++ G 
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               R   A  ++ ++   G   +  T N ++  L K  + ++A ++ Q
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 190/408 (46%), Gaps = 2/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +++++ +  + G  D   +VF  MR  G  PN+      +    ++G+ + A     Q 
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++    +YNSL++ L   N  + A  +  E        +T  FN +I    + G V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++ + F  M   G  P+++TYNTLI+G C   ++    +LL  +       P+ VTY++
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM-VSVGLKPNTVTYST 551

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK+ +M+ A  ++ EM S G+ P  +T+N+++ G  +     +A+ +  R+   G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++ T++ ++ G C+N   +  L++   +   +L     TF I+I+AL K  R ++A+
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                   N LVP  + Y  + +     G ++E + +   ME+  C  D      ++   
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +G +  A   +  M+       + +  SL   LL GG   E +R +
Sbjct: 732 LQRGEITRA-GTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFL 778



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 7/314 (2%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF--FYDMGSFGCSPDIVTYN 300
           ++A ++F E  R       +  N  +  ++R         +      G+   +PD+ TY 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI-YNEMN 359
            LI   CR   +  G   L  V  K  F  D + +T ++ G C   +   A  I    M 
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNV-IKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 360 SCGIKPSAVTFNVLIDGF---GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
             G  P+  ++N+L+ G     +    +   +M       G  PDVV+++++I+G+ + G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
             ++      EM  + + P+V T+  +I ALCK   ++ A   L  +  N ++P    YN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G+C +G   EA   + +M     +PD VT+++L+   C  GR +EA  IF+ M + 
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 537 GCAPDDITVNSLIS 550
           G  P+  T  +L+ 
Sbjct: 331 GLKPEITTYGTLLQ 344



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 67/150 (44%), Gaps = 3/150 (2%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
           DE+  +    ++Y     +  + +++      R+  + +   +++ P    Y  +I   C
Sbjct: 39  DELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCC 98

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
           +AG +D     +  + +K  + D + FT L+ G C   R  +A+ I   +M  +GC P+ 
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            + N L+  L       EA  ++   ++D+
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDR 188


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 198/381 (51%), Gaps = 3/381 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV-SSCIRAGKCDAAKGLLSQ 216
           TYN ++R LC  G   +   V D M     +P+       + ++C R+G   A K LL +
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK-LLDE 218

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R    T     YN ++N + ++   D+A+   K       +P+T ++NI+++GL     
Sbjct: 219 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A E   +MG  GC P++VT+N LIS LCR   V    E+L+++  K   +P+ ++Y 
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP-KYGCTPNSLSYN 337

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++  +CK  KMDKA    + M S G  P  V++N L+    + G +  A  +  ++   
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P +++++++IDG  + G+  + L+L +EM  K L P++ T++ +   LC+E+R+ DA
Sbjct: 398 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 457

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R   +++   + P   +YN +I G CK      A  + A M    C P++ T+TILI G
Sbjct: 458 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517

Query: 517 HCMKGRMVEAISIFNKMLRIG 537
              +G + EA  + +++   G
Sbjct: 518 LAYEGLIKEARDLLDELCSRG 538



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 189/376 (50%), Gaps = 23/376 (6%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG+ DAA+ L+++     V    + YN+L+  L  +     A+ +  E  R    PD  T
Sbjct: 139 AGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVT 195

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV- 322
           + IL++   +    K+A +   +M   GC+PDIVTYN +++G+C+   V    E LK + 
Sbjct: 196 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 255

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
            +  E  P+ V+Y  V+ G C   + + A  +  EM   G  P+ VTFN+LI    + G 
Sbjct: 256 SYGCE--PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 313

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  + E++  +G  P+ ++++ L+  +C+  ++++ +   D M  +   P++ ++  
Sbjct: 314 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 373

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L+ ALC+   ++ A   L QLK     P    YN VIDG  KAG   EA  ++ EM  K 
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK-------- 554
            +PD +T++ +  G C + R+ +AI  F K+  +G  P+ +  N++I  L K        
Sbjct: 434 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 493

Query: 555 ---------GGMPNEA 561
                    G MPNE+
Sbjct: 494 DLFAYMIGNGCMPNES 509



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 200/418 (47%), Gaps = 4/418 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV  +       YN ++   C  G  D+ + +   M  +   P++      +     
Sbjct: 114 EARRVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCG 170

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G+   A  +L +            Y  LL A  K++   +A+ +  E       PD  T
Sbjct: 171 RGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVT 230

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N+++ G+ + G V  A EF  ++ S+GC P+ V+YN ++ GLC         EL+ E+ 
Sbjct: 231 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 290

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    P+VVT+  +IS  C+ G ++ A  +  ++   G  P+++++N L+  F K   M
Sbjct: 291 QKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 349

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A    + M+S G  PD+V++++L+   CR+G+++  ++L  ++K K  +P + ++  +
Sbjct: 350 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 409

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ L K  +  +A   L ++    L P    Y+ +  G C+   +++A     ++++   
Sbjct: 410 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 469

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +P+ V +  +I+G C +     AI +F  M+  GC P++ T   LI  L   G+  EA
Sbjct: 470 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 527



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 15/402 (3%)

Query: 163 MRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +RSL   G L +++++V    R     P++      +     +G+   A+ +L+   P  
Sbjct: 72  LRSLVRRGELDEALRLVGSARR-----PDAGTCAALIKKLSASGRTAEARRVLAACGP-- 124

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
                  YN+++         D A  +  E   +  +PD +T+N LI+GL   G    A 
Sbjct: 125 ---DVMAYNAMVAGYCGAGQLDAARRLVAE---MPVEPDAYTYNTLIRGLCGRGRTANAL 178

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M    C PD+VTY  L+   C+ +   +  +LL E++ K   +PD+VTY  V++G
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNG 237

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C+ G++D A      + S G +P+ V++N+++ G         AE +   M   G  P+
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 297

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VVTF+ LI   CR G +   L++ +++     +PN  ++  L++A CK+ +++ A  FL 
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +      P    YN ++   C++G VD A  ++ ++++K C P  +++  +I G    G
Sbjct: 358 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 417

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           +  EA+ + N+M+  G  PD IT +++ + L +     +A R
Sbjct: 418 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 174/369 (47%), Gaps = 15/369 (4%)

Query: 198 VSSCIRAGKCDAAKGLL-SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
           + S +R G+ D A  L+ S  RP   T +     +L+  L       EA  +        
Sbjct: 72  LRSLVRRGELDEALRLVGSARRPDAGTCA-----ALIKKLSASGRTAEARRVLAA----- 121

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             PD   +N ++ G    G++  A     +M      PD  TYNTLI GLC     A   
Sbjct: 122 CGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANAL 178

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            +L E+  +    PDVVTYT ++   CK     +A  + +EM   G  P  VT+NV+++G
Sbjct: 179 AVLDEM-LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 237

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             + G +  A    + + S+G  P+ V+++ ++ G C   +     +L  EM  K   PN
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 297

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           V TF +LI+ LC++  +  A   L+Q+      P    YNP++  FCK   +D+A   + 
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  + C PD V++  L+   C  G +  A+ + +++   GCAP  I+ N++I  L K G
Sbjct: 358 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 417

Query: 557 MPNEAFRIM 565
              EA  ++
Sbjct: 418 KTKEALELL 426



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 2/353 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           LE   +    K  +K L+  R +        TYN+V+  +C+ G  D        + S G
Sbjct: 200 LEATCKRSGYKQAMKLLDEMR-DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG 258

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
             PN+      +     A + + A+ L+ +        +   +N L++ L ++   + A+
Sbjct: 259 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 318

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            + ++  +    P++ ++N L+    +  ++ KA  F   M S GC PDIV+YNTL++ L
Sbjct: 319 EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTAL 378

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           CR  EV    ELL ++K K   +P +++Y +VI G  K GK  +A  + NEM S G++P 
Sbjct: 379 CRSGEVDVAVELLHQLKDKG-CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 437

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            +T++ +  G  +   +  A     ++   G  P+ V ++++I G C+  + +  + L  
Sbjct: 438 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 497

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            M G    PN  T+TILI  L  E  + +AR  L +L    +V K  +    I
Sbjct: 498 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAI 550


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 224/469 (47%), Gaps = 19/469 (4%)

Query: 119 EKLSPLNSLEVI----KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           EKL+P  S E++    +    P+LG +F  ++    S   S+ T+NLV+  L +    D+
Sbjct: 56  EKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDT 114

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
              + + +++       P     +++  ++G  + A     + +        F YNS+L+
Sbjct: 115 YWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILH 174

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            +V++     A+ ++ +  +L   P+  TF IL+ GL + G+   A + F +M   G  P
Sbjct: 175 VMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPP 234

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + + Y  ++SGLC+       H LL  +K  S   PD +T  +++ G+CKLG++D+A  +
Sbjct: 235 NTMIYTIILSGLCQAKRTDDVHRLLNTMKV-SGCCPDSITCNALLDGFCKLGQIDEAFAL 293

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
                  G       ++ LIDG  +       +    +M   G  PDVV ++ LI G+C 
Sbjct: 294 LQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCE 353

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G ++  L + ++M  + LSP+ Y +  LI   C    L+ AR    ++  ND  P    
Sbjct: 354 VGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCT 413

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM- 533
           Y  +I G C+ G +DEA  I  +ME   C P  +TF  LI G C  G + EA  +F KM 
Sbjct: 414 YTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKME 473

Query: 534 --------LRIGCAPDDI----TVNSLISCLLKGGMPNEAFRIMQRASE 570
                   LR+    D +    ++ +++  L + G+  +A++++ + ++
Sbjct: 474 IGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLAD 522



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 14/400 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++  LC+    D V  + + M+  G  P+S      +    + G+ D A  LL  F 
Sbjct: 239 YTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFE 298

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                +    Y+SL++ L +    DE     ++ F+   +PD   + ILI+G   +G V 
Sbjct: 299 KEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVD 358

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     DM   G SPD   YN LI G C V  + +   L  E+  K++  P   TYT +
Sbjct: 359 YALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEIS-KNDCFPTSCTYTIL 417

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM----- 393
           I G C+ G +D+A  I+N+M + G  PS +TFN LIDG  K G +  A ++  +M     
Sbjct: 418 ICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKN 477

Query: 394 ------LSFGY--LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
                 LS G   + D  +  ++++  C +G + +  KL  ++    + P++ T+ +LIN
Sbjct: 478 PSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLIN 537

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             CK   +N A +  ++L+     P    Y  +IDGF +    ++A  ++ +M +  C P
Sbjct: 538 GFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTP 597

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
               +  L+   C KG++  A S++ K LR   + +D T+
Sbjct: 598 SSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETL 637



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 212/448 (47%), Gaps = 20/448 (4%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + L+ N +  T+ +++  LC+ G  D    +FD M   G  PN+ +    +S   +A + 
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    LL+  +       +   N+LL+   K    DEA  + + + +         ++ L
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL R     +  E+   M   G  PD+V Y  LI G C V  V     +L ++  +  
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG- 371

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SPD   Y ++I G+C +G +DKA  +  E++     P++ T+ +LI G  + G +  A 
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEAR 431

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK-GKNLS------------ 434
            +  +M + G  P ++TF++LIDG C+ G+L +   L  +M+ GKN S            
Sbjct: 432 QIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRV 491

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
            +  +   ++  LC+   +  A + L QL  + +VP    YN +I+GFCKA N++ A  +
Sbjct: 492 MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKL 551

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             E++ K   PD VT+  LI G     R  +A  + ++M++ GC P       L++   +
Sbjct: 552 FRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCR 611

Query: 555 GGMPNEAFRIMQR------ASEDQNLQL 576
            G  + AF +  +      + ED+ L+L
Sbjct: 612 KGKLSVAFSLWLKYLRSLPSQEDETLKL 639



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 178/388 (45%), Gaps = 17/388 (4%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K Y+ ++  L     +D VQ     M   G  P+  +    +      G  D A  +L+ 
Sbjct: 307 KGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLND 366

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                ++  T+ YN+L+         D+A  +  E  +    P + T+ ILI G+ R G 
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS------- 329
           + +A + F  M + GCSP I+T+N LI GLC+  E+     L  +++     S       
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQ 486

Query: 330 -----PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
                 D  +  +++   C+ G + KA  +  ++   G+ P  +T+NVLI+GF K  N+ 
Sbjct: 487 GADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNIN 546

Query: 385 SA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            A +  RE  L  G+ PD VT+ +LIDG+ R  +     ++ D+M     +P+   +  L
Sbjct: 547 GAFKLFRELQLK-GHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCL 605

Query: 444 INALCKENRLNDA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +   C++ +L+ A   +LK L+   L  +      + +   + G +++A   + EM  K 
Sbjct: 606 MTWSCRKGKLSVAFSLWLKYLR--SLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKL 663

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIF 530
              +   +TI +IG C   R  EA+ IF
Sbjct: 664 NNFEIAPYTIWLIGLCQARRSEEALKIF 691



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 185/426 (43%), Gaps = 23/426 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++R  CE+G+ D    + + M   G  P++      +      G  D A+ L  +  
Sbjct: 344 YTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEIS 403

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +   ++  Y  L+  + +    DEA  +F +   L   P   TFN LI GL + GE++
Sbjct: 404 KNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELE 463

Query: 279 KAFEFFYDMGSFGCSP--------------DIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +A   FY M   G +P              D  +  T++  LC    + + ++LL ++  
Sbjct: 464 EARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLA- 521

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
            S   PD++TY  +I+G+CK   ++ A  ++ E+   G  P +VT+  LIDGF +V    
Sbjct: 522 DSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREE 581

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI-L 443
            A  + ++M+  G  P    +  L+   CR G+L+    L   +K     P+    T+ L
Sbjct: 582 DAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW--LKYLRSLPSQEDETLKL 639

Query: 444 INALCKENRLNDARRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
                ++  L  A R L ++  K N+    P  Y   + G C+A   +EA  I   ++E 
Sbjct: 640 AEEHFEKGELEKAVRCLLEMNFKLNNFEIAP--YTIWLIGLCQARRSEEALKIFLVLKEC 697

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +   +  +  +LI G C  G +  A+ IF   L  G        N L+  L+       A
Sbjct: 698 QMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHA 757

Query: 562 FRIMQR 567
             ++ R
Sbjct: 758 LDLLNR 763


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 210/441 (47%), Gaps = 37/441 (8%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +M+  C  G  DS   +F+ +  DG  PN       +  C  +G  + A  L +Q +   
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +  S F  NSLL   +K    +EA  +F E        + +T+NI++  L + G++ +A 
Sbjct: 431 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC-GVANIFTYNIMMSWLCKGGKMDEAC 489

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M + G  P++V+YN +I G CR   +     +  ++    +  P+VVTY+ +I G
Sbjct: 490 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM-LARDLKPNVVTYSILIDG 548

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI--------------------------- 374
             K G  +KA  ++++M S  I P+  TFN +I                           
Sbjct: 549 NFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPS 608

Query: 375 --------DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
                   DGF K GN+ SA  +   M  FG  P+VVT++SLI+G+C++ +++  LK  D
Sbjct: 609 CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRD 668

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM+ K L  +V  ++ LI+  CK   +  A+    +L    L P   +YN +I GF    
Sbjct: 669 EMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLN 728

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           N++ A V   +M   R   D  T+T LI G   +GR+V A  ++ +ML  G  PD IT +
Sbjct: 729 NMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFH 788

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
            L++ L   G    A +I++ 
Sbjct: 789 VLVNGLCNKGQLENARKILEE 809



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 206/400 (51%), Gaps = 5/400 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++M  LC+ G  D    + D M + G +PN       +    R G  D A  + S  
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++  +   Y+ L++   K+ ++++A+ +F +   L   P  +TFN +I GL ++G++
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF--SPDVVTY 335
            +A +   +    G  P  +TYN+++ G  +   +     + +E+    EF  SP+VVTY
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM---CEFGVSPNVVTY 647

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           TS+I+G+CK  ++D A    +EM   G++     ++ LIDGF K  +M SA+ +   +L 
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ + ++S+I G+     +   L    +M    +  ++ T+T LI+ L KE RL  
Sbjct: 708 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 767

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     ++    +VP    ++ +++G C  G ++ A  I+ EM+ K   P  + +  LI 
Sbjct: 768 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 827

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           G+  +G + EA ++ ++ML  G  PDD+T + LI+   KG
Sbjct: 828 GYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 867



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 187/369 (50%), Gaps = 1/369 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +  +  +YN ++   C  G  D    VF  M +    PN       +    + G  
Sbjct: 496 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 555

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  L  Q     +  + F +N+++N L K     EA    K +      P   T+N +
Sbjct: 556 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 615

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + G  + G +  A   + +M  FG SP++VTY +LI+G C+ N +    +   E++ K  
Sbjct: 616 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG- 674

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              DV  Y+++I G+CK   M+ A  ++ E+   G+ P+ + +N +I GF  + NM +A 
Sbjct: 675 LELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAAL 734

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              ++M++     D+ T+++LIDG  + G+L     L  EM  K + P++ TF +L+N L
Sbjct: 735 VWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGL 794

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C + +L +AR+ L+++   ++ P   +YN +I G+ + GN+ EA  +  EM ++   PD 
Sbjct: 795 CNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDD 854

Query: 508 VTFTILIIG 516
           VT+ ILI G
Sbjct: 855 VTYDILING 863



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 196/406 (48%), Gaps = 4/406 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N ++R   +  L +    +FD    D  + N       +S   + GK D A  LL     
Sbjct: 439 NSLLRGYLKAPLWEEASKLFDEA-VDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVN 497

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +  +   YN ++    ++ N D A  +F +      +P+  T++ILI G  + G+ +K
Sbjct: 498 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 557

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A + F  M S   +P   T+NT+I+GLC+V +++   + LK    +  F P  +TY S++
Sbjct: 558 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF-LEEGFIPSCMTYNSIV 616

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G+ K G +D A  +Y EM   G+ P+ VT+  LI+GF K   +  A   R+ M   G  
Sbjct: 617 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 676

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            DV  +S+LIDG+C+   +     L  E+    LSPN   +  +I+     N +  A  +
Sbjct: 677 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 736

Query: 460 LKQLKWNDLVPKPF-MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            K++  ND +P     Y  +IDG  K G +  A+ +  EM  K   PD +TF +L+ G C
Sbjct: 737 YKKM-INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLC 795

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            KG++  A  I  +M R    P  +  N+LI+   + G   EAF +
Sbjct: 796 NKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTL 841



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 198/401 (49%), Gaps = 37/401 (9%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           + +++ IRA + + A    +     +V       N LL ALV++N   E   ++ +    
Sbjct: 195 YLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLR 254

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
               D +T +++++   + G V++A E+F +    G   D   Y+ +I  +C+      G
Sbjct: 255 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 314

Query: 316 HELLKEVKFKSEFSPDVVTYTSVI-----------------------------------S 340
            ELL+E+K +  + P   T+TSVI                                    
Sbjct: 315 LELLEEMKERG-WVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMK 373

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           GYC  G +D A  ++N++   G+ P+ VT++VLI+G    GN+  A  +  +M   G  P
Sbjct: 374 GYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 433

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
            V   +SL+ GY +     +  KL DE     ++ N++T+ I+++ LCK  ++++A   L
Sbjct: 434 SVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLL 492

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
             +    +VP    YN +I G C+ GN+D A+ + ++M  +  KP+ VT++ILI G+  K
Sbjct: 493 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 552

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           G   +A+ +F++ML +  AP D T N++I+ L K G  +EA
Sbjct: 553 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 593



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 192/413 (46%), Gaps = 2/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++R+  + G  +  +  F   +  G   ++      + +  +    +    LL + 
Sbjct: 262 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 321

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      S   + S++ A V Q N  EA+ + +E        +      L++G    G +
Sbjct: 322 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 381

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  +   G  P+ VTY+ LI G C    + +  EL  ++K      P V    S
Sbjct: 382 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG-IPPSVFNVNS 440

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY K    ++A+ +++E   CG+  +  T+N+++    K G M  A  + + M++ G
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 499

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+VV+++ +I G+CR G ++    +  +M  ++L PNV T++ILI+   K+     A 
Sbjct: 500 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 559

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q+   ++ P  F +N +I+G CK G + EA   +    E+   P  +T+  ++ G 
Sbjct: 560 DLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF 619

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +G +  A++++ +M   G +P+ +T  SLI+   K    + A +      E
Sbjct: 620 IKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 672



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 1/295 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC++G     +        +G +P+       V   I+ G  D+A  +  + 
Sbjct: 576 TFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM 635

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+ +   Y SL+N   K N  D A+    E      + D   ++ LI G  +  ++
Sbjct: 636 CEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDM 695

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A + F+++   G SP+ + YN++ISG   +N +       K++        D+ TYT+
Sbjct: 696 ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM-INDRIPCDLGTYTT 754

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K G++  A+ +Y EM S GI P  +TF+VL++G    G + +A  + E M    
Sbjct: 755 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 814

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
             P V+ +++LI GY R G L +   L DEM  + L P+  T+ ILIN   K +R
Sbjct: 815 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 151/340 (44%), Gaps = 8/340 (2%)

Query: 232 LLNALVKQNNADEAVYMFKEYF-----RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           LLN  V   ++D +  +F ++      R   + D   FN L+    R   ++ A + F  
Sbjct: 157 LLNRYV-SGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 215

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M      P +   N L++ L R N +    +L  ++  +  +  D  T   ++    K G
Sbjct: 216 MICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYG-DHFTVHVMVRACLKEG 274

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           ++++A   + E    G+K  A  ++++I    K  N      + E M   G++P   TF+
Sbjct: 275 RVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFT 334

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           S+I      G + + L+L +EM       N+   T L+   C +  L+ A     ++  +
Sbjct: 335 SVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITED 394

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            L P    Y+ +I+G C +GN+++A+ +  +M+     P       L+ G+       EA
Sbjct: 395 GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEA 454

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             +F++ +  G A +  T N ++S L KGG  +EA  ++ 
Sbjct: 455 SKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 493



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 93/203 (45%)

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            FN L++ + +   + +A      M+    +P V   + L+    R   + +   L ++M
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             + +  + +T  +++ A  KE R+ +A  + ++ K   +      Y+ +I   CK  N 
Sbjct: 252 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           +    ++ EM+E+   P + TFT +I+    +G MVEA+ +  +M+  G   + +   SL
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 371

Query: 549 ISCLLKGGMPNEAFRIMQRASED 571
           +      G  + A  +  + +ED
Sbjct: 372 MKGYCAQGNLDSALNLFNKITED 394


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 192/405 (47%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +T N V+R   E G     + VFD M   G  P+       V  C R GK +    LL+ 
Sbjct: 147 ETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAA 206

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 ++       ++ +L ++    +    F+      + P+   +   I GL +   
Sbjct: 207 MWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRY 266

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           VK+AF    +M   G  P++ T+ TLI GLC++    R   L  ++   S + P+V TYT
Sbjct: 267 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 326

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I GYC+ GK+ +A  +   M   G+KP+  T+  LI G  K G+   A  +  +M   
Sbjct: 327 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 386

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+LP++ T++++IDG+C+ G++ +  K+      + L  +  T+TILI   CK+  +  A
Sbjct: 387 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 446

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                ++  N   P    Y  +I  +C+   ++E+     +       P K T+T +I G
Sbjct: 447 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 506

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +C  GR   A+ +F +M++ GC  D IT  +LIS L K     EA
Sbjct: 507 YCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEA 551



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 178/367 (48%), Gaps = 3/367 (0%)

Query: 186 GHLPNS-PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           G LP +  ++   V++   AG+   A  ++ + R   + +     N +L   ++  +   
Sbjct: 105 GSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVY 164

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  +F    R    PD  +F  L+    R G+V++       M  +G S D  T   ++ 
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 224

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
            LC         E  + +  ++   P+VV YT+ I G CK   + +A  +  EM   G+K
Sbjct: 225 SLCEKGRFKDVSEFFRRM-LETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK 283

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           P+  T   LIDG  K+G    A  +  +++ S  Y P+V T++ +I GYCR G+L +   
Sbjct: 284 PNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM 343

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L   M  + L PN  T+T LI   CK    + A   + ++K    +P  + YN VIDGFC
Sbjct: 344 LLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFC 403

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G + EA  ++     +  K DK+T+TILI  HC +G +  A+ +F++M+  GC PD  
Sbjct: 404 KKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIE 463

Query: 544 TVNSLIS 550
              SLIS
Sbjct: 464 AYTSLIS 470



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 185/388 (47%), Gaps = 4/388 (1%)

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           R   SL+++  T  +V+RSLCE G    V   F  M   G  PN      ++    +   
Sbjct: 209 RYGFSLDNA--TCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRY 266

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFN 265
              A  +L +     +  + + + +L++ L K    + A  +F +  +  S +P+  T+ 
Sbjct: 267 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 326

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ++I G  R G++ +A      M   G  P+  TY TLI G C+     R  EL+ ++K +
Sbjct: 327 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMK-Q 385

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             F P++ TY +VI G+CK GK+ +A  +     S G+K   +T+ +LI    K G++  
Sbjct: 386 EGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITY 445

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + +RM+  G  PD+  ++SLI  YC+  Q+ +  K  D+     L P   T+T +I 
Sbjct: 446 ALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIA 505

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             CK  R   A R  +++  N        Y  +I G CK   ++EA  +   M +KR  P
Sbjct: 506 GYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP 565

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKM 533
            +VT   L   +C + +   A+S+ +++
Sbjct: 566 CEVTRVTLTFEYCRREKTSIAVSVLDRL 593



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 66/159 (41%)

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           ++  +   G+L +   +  EM+   L   V T   ++    +      AR+    +    
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    +  ++   C+ G V+E + ++A M       D  T T+++   C KGR  +  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             F +ML  G  P+ +   + I  L K     +AF +++
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLE 275


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 1/417 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            ++L++R     G+       F  M   G  P+       +   ++  K  A      + 
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEM 159

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      +N L+N L  +    +A Y+ K+       P   T+N ++    + G  
Sbjct: 160 LARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRY 219

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A E    MGS G   D  TYN L+  LC+ N  A+G+ LLK+++ K   SP+ +TY S
Sbjct: 220 KAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMR-KRMISPNEITYNS 278

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+ K GK+  AT I+ EM+   + P+ VT+N LIDG    GN   A  + E M + G
Sbjct: 279 IINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATG 338

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V++S+L++G CR+ +      + + M+   +      +T +I+ LC+   LN++ 
Sbjct: 339 PKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESV 398

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L ++  + +VP    ++ +I+GFC+ G +     I+ +M +    P+ + +T LI  +
Sbjct: 399 KLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNY 458

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           C  G +VEA  ++  M RIG   +    N L+S L K G    A       S+  N+
Sbjct: 459 CKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNV 515



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 191/412 (46%), Gaps = 14/412 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G   +   +F  M     LPN       +      G  + A  +L   
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334

Query: 218 -----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ-PDTWTFNILIQGL 271
                +P EV+     Y++LLN L +    + +  +  E  R+         +  +I GL
Sbjct: 335 EATGPKPNEVS-----YSALLNGLCRHAKFELSKSIL-ERMRMNGMIVGCIAYTAMIDGL 388

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            R G + ++ +    M   G  PD+VT++ LI+G CRV ++    E++ ++ +K+  +P+
Sbjct: 389 CRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKM-YKAGLAPN 447

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            + YT++I  YCK G + +A  +Y  M+  G   +    NVL+    K G +  AEY   
Sbjct: 448 SIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFH 507

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M   G +P+ +TF  +I+GY  +G   +   + DEM      P+ +T+  L+ ALC+  
Sbjct: 508 HMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAG 567

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +  +A+R L +L +         YN ++    K+G + +A  +  EM ++   PD  T+ 
Sbjct: 568 KFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYA 627

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGC-APDDITVNSLISCLLKGGMPNEAF 562
           I+  G   +G+MV A+  +  +L  G  +P+ +   + +  L + G    A 
Sbjct: 628 IIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAAL 679



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 180/415 (43%), Gaps = 3/415 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYN ++    + G+      +FD M     LP+S       +  IR GK  AA       
Sbjct: 590  TYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNL 649

Query: 218  R-PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               G V+    MY + ++ L +   +  A+Y  ++  +     D    N+++ G SR+G+
Sbjct: 650  LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGK 709

Query: 277  VKKAFEFFYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + KA + F  M S    SP + TYN L+ G  +   +++   L   +  ++   PD +T 
Sbjct: 710  MAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLY-NIMMRTGIFPDKLTC 768

Query: 336  TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             S+I G+CK   +D    +  +M   G+     TFN+LI  + +   +  A  +   M  
Sbjct: 769  HSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNL 828

Query: 396  FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            F   PD+ T  S+I    R   + +   L  EM  +   P+   +  L+N +C+   ++ 
Sbjct: 829  FDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHG 888

Query: 456  ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
            A +   +++   +       + ++ G  K G V+EA +++  M  K   P   TFT L+ 
Sbjct: 889  AFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMH 948

Query: 516  GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              C    +VEA+ + + M       D I  N LIS L   G    A ++ +   +
Sbjct: 949  MFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQ 1003



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 179/423 (42%), Gaps = 36/423 (8%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +FD M   GH P+       + +  RAGK   AK LL +       + T  YN++L    
Sbjct: 540 MFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETF 599

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNIL------------------------------ 267
           K     +AV +F E  +    PD++T+ I+                              
Sbjct: 600 KSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEK 659

Query: 268 ------IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
                 + GL R G+ K A  F  DM   G   D++  N +++G  R+ ++A+  ++   
Sbjct: 660 VMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTM 719

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +      SP + TY  ++ GY K   + K + +YN M   GI P  +T + LI GF K  
Sbjct: 720 MWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSA 779

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +     + ++ML  G   D  TF+ LI  YC   ++ +   L + M   ++ P++ T  
Sbjct: 780 MLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHD 839

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            +I+ L + + + ++   L ++     +P    Y  +++  C+ G++  A  +  EME  
Sbjct: 840 SIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEAL 899

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                 V  + L+ G    G++ EA  + + MLR    P   T  +L+    +     EA
Sbjct: 900 GISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEA 959

Query: 562 FRI 564
            ++
Sbjct: 960 LKL 962



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 4/210 (1%)

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF-GYLPDVVTFSSLIDGYCRNGQLN 419
           C   PS   F++LI  + + G MV       R++   G+ P V T + L+    +  ++ 
Sbjct: 94  CKSNPS--VFDLLIRVYLREG-MVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVG 150

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
                  EM  + + P+V TF ILIN LC E +L  A   LK+++ +  VP    YN V+
Sbjct: 151 AVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVL 210

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           + +CK G    A  ++ +M  K  + D  T+ +L+   C   R  +   +  KM +   +
Sbjct: 211 NWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMIS 270

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           P++IT NS+I+  +K G    A RI Q  S
Sbjct: 271 PNEITYNSIINGFVKEGKIGAATRIFQEMS 300



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 91/187 (48%), Gaps = 1/187 (0%)

Query: 229  YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
            ++S+++ L + +   E+  +  E       PD   +  L+  + R+G +  AF+   +M 
Sbjct: 838  HDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEME 897

Query: 289  SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            + G S   V  + L+ GL +  +V    +L+ +   +    P + T+T+++  +C+   +
Sbjct: 898  ALGISSGDVAESALVRGLAKCGKVEEA-KLVLDFMLRKSLIPTIATFTTLMHMFCRNESL 956

Query: 349  DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             +A  + + M+ C +K   + +NVLI G    G++ SA  + + +   G  P++ T+  L
Sbjct: 957  VEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCIL 1016

Query: 409  IDGYCRN 415
            ID    N
Sbjct: 1017 IDAIFTN 1023


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 205/413 (49%), Gaps = 6/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++++LC+    D  + +   M + G  P++      +SS    G     + L  +F
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P        +YN+L+N L K+++   A  + +E       P+  +++ LI  L   G++
Sbjct: 243 EP-----VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF F   M   GC P+I T ++L+ G           +L  ++       P+VV Y +
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+C  G + KA  +++ M   G  P+  T+  LI+GF K G++  A Y+  +ML+ G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV ++++++  CR+ +  +   L + M  +N +P+V TF   I  LC   RL+ A 
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477

Query: 458 RFLKQLKWNDLVPKPFM-YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +  +Q++     P   + YN ++DG  KA  ++EA  +  E+  +  +    T+  L+ G
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            C  G    A+ +  KM+  G +PD+IT+N +I    K G    A +++   S
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 233/519 (44%), Gaps = 69/519 (13%)

Query: 122 SPLNSLEVIKRLDNPK---LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           + +  L+V+KRL       L L F +    +    H+  T+ +++R L   G  DSVQ +
Sbjct: 39  AEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYL 98

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
              M+  G   +  +    +S   + G  + A  +  + +      S  +YN +L+ L+ 
Sbjct: 99  LQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 158

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
           +N       ++++  R   +P+ +T+N+L++ L +  +V  A +   +M + GC PD V+
Sbjct: 159 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVS 218

Query: 299 YNTLISGLCRVNEVARGHE------------------LLKEVKFKSEF-----------S 329
           Y T+IS +C V  V  G E                  L KE  +K  F           S
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278

Query: 330 PDVVTYTSVISGYCKLGKMD-----------------------------------KATGI 354
           P+V++Y+++I+  C  G+++                                    A  +
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338

Query: 355 YNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +N+M    G++P+ V +N L+ GF   GN+V A  +   M   G  P++ T+ SLI+G+ 
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G L+  + + ++M      PNV  +T ++ ALC+ ++  +A   ++ +   +  P   
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEK-RCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            +N  I G C AG +D A  +  +ME++ RC P+ VT+  L+ G     R+ EA  +  +
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +   G      T N+L+      G+P  A +++ +   D
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 144/312 (46%), Gaps = 2/312 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D++ +    +R  G  PN       V      G    A  + S       + +   Y SL
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           +N   K+ + D AVY++ +       P+   +  +++ L R  + K+A      M    C
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           +P + T+N  I GLC    +    ++ ++++ +    P++VTY  ++ G  K  ++++A 
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+  E+   G++ S+ T+N L+ G    G    A  +  +M+  G  PD +T + +I  Y
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573

Query: 413 CRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           C+ G+  +  ++ D +    +   P+V ++T +I  LC+ N   D    L+++    +VP
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633

Query: 471 KPFMYNPVIDGF 482
               ++ +I+ F
Sbjct: 634 SIATWSVLINCF 645


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 179/342 (52%), Gaps = 1/342 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            + Y++ L A  K  + D A  +F+E  R     +  T+N++I GL R G V++AF F  
Sbjct: 245 VYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 304

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +M  +G SPD  TY  L++GLC+   +     LL E+   S   P+VV Y +++ G+ K 
Sbjct: 305 EMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSC-SGLKPNVVVYATLVDGFMKE 363

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           GK  +A  I NEM S G++P+ + ++ LI G  K+G +  A  +   M+  G+ PD  T+
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
             L+ G+ ++   +   +L +EM+   + PN YT+ I+IN LC+     +A   L+++  
Sbjct: 424 HPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMIS 483

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L P  FMY P+I G  K G++  A   +  M +    PD   +  LI G    GR+ E
Sbjct: 484 EGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEE 543

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           A   + ++ + G  PD+ T + LI    K     +A +++Q+
Sbjct: 544 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQ 585



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 199/414 (48%), Gaps = 1/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+  + + C+    D+ + VF+ MR      N       +S   R+G  + A G   + 
Sbjct: 247 TYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 306

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++   F Y +L+N L K     EA  +  E      +P+   +  L+ G  + G+ 
Sbjct: 307 VDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKA 366

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+   +M S G  P+ + Y+ LI GLC++ ++ R  +LL E+  K    PD  TY  
Sbjct: 367 AEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM-IKVGHRPDTFTYHP 425

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+ +    D A  + NEM + GI P+A T+ ++I+G  + G    A  + E M+S G
Sbjct: 426 LMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEG 485

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+   ++ LI G+ + G ++   +  + M   N+ P+++ +  LI  L    R+ +A 
Sbjct: 486 LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAE 545

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            +  Q++   LVP  F Y+ +I G+CK  N+++A+ ++ +M     KP+  T+T L+ G+
Sbjct: 546 EYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGY 605

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
                  +  SI   ML  G  PD+     +I  L +      AF ++    ++
Sbjct: 606 FKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 206/419 (49%), Gaps = 3/419 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           +L L  + +  N +++ L      + V  +  +M   G  P+      F+ +  +A   D
Sbjct: 203 DLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFD 262

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNIL 267
           AAK +  + R  +  M+   YN +++ L +    +EA + FKE    Y   PD +T+  L
Sbjct: 263 AAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA-FGFKEEMVDYGLSPDAFTYGAL 321

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G +K+A     +M   G  P++V Y TL+ G  +  + A   ++L E+   + 
Sbjct: 322 MNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEM-ISAG 380

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ + Y ++I G CK+G++ +A+ + NEM   G +P   T++ L+ G  +  +   A 
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAF 440

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M + G LP+  T+  +I+G C+NG+  +   L +EM  + L PN + +  LI   
Sbjct: 441 ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 500

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            KE  ++ A   L+ +   +++P  F YN +I G    G ++EA    A+++++   PD+
Sbjct: 501 SKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDE 560

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            T++ LI G+C    + +A  +  +ML  G  P+  T   L+    K     +   I+Q
Sbjct: 561 FTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 189/392 (48%), Gaps = 1/392 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++R LC++G       + + M   GH P++      +    +    D A  LL++ R
Sbjct: 388 YDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMR 447

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + Y  ++N L +   + EA  + +E      +P+ + +  LI G S+ G + 
Sbjct: 448 NSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHIS 507

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A E   +M      PD+  YN+LI GL  V  +    E   +V+ K    PD  TY+ +
Sbjct: 508 LACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ-KRGLVPDEFTYSGL 566

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYCK   ++KA  +  +M + G+KP+A T+  L++G+ K  +      + + ML  G 
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD   +  +I    R+  +     +  E++   L P+++ ++ LI+ LCK   +  A  
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L ++    L P    YN +IDGFC++G++  A  +   +  K   P+ VT+T LI G+C
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             G + +A  ++  ML  G APD    N L +
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLAT 778



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 210/451 (46%), Gaps = 34/451 (7%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  L+    TY  +M  LC+ G     + + D M   G  PN  +    V   ++ GK 
Sbjct: 307 VDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKA 366

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  +L++     V  +  MY++L+  L K      A  +  E  ++  +PDT+T++ L
Sbjct: 367 AEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPL 426

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV----- 322
           +QG  +  +   AFE   +M + G  P+  TY  +I+GLC+  E      LL+E+     
Sbjct: 427 MQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGL 486

Query: 323 -----------------------------KFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
                                          K+   PD+  Y S+I G   +G++++A  
Sbjct: 487 KPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEE 546

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
            Y ++   G+ P   T++ LI G+ K  N+  A+ + ++ML+ G  P+  T++ L++GY 
Sbjct: 547 YYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYF 606

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           ++    +   +   M G    P+ + + I+I  L +   +  A   L +++ N LVP   
Sbjct: 607 KSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 666

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           +Y+ +I G CK  ++++A  ++ EM ++  +P  V +  LI G C  G +  A ++F+ +
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 726

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           L  G  P+ +T  +LI    K G   +AF +
Sbjct: 727 LAKGLLPNCVTYTALIDGNCKNGDITDAFDL 757



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 209/485 (43%), Gaps = 44/485 (9%)

Query: 134 DNPKLGL-KFLEFSRVNLSLNHSFK--------TYNLVMRSLCEMGLHDSVQVVFDYMRS 184
           DN   GL K  +  R +  LN   K        TY+ +M+   +    D    + + MR+
Sbjct: 389 DNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRN 448

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
            G LPN+      ++   + G+   A  LL +     +  + FMY  L+    K+ +   
Sbjct: 449 SGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISL 508

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A    +   +    PD + +N LI+GLS +G +++A E++  +   G  PD  TY+ LI 
Sbjct: 509 ACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIH 568

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           G C+   + +  +LL+++   S   P+  TYT ++ GY K    +K + I   M   G K
Sbjct: 569 GYCKTRNLEKADQLLQQM-LNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDK 627

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P    + ++I    +  NM  A  +   +   G +PD+  +SSLI G C+   + + + L
Sbjct: 628 PDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGL 687

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEM  + L P +  +  LI+  C+   ++ AR     +    L+P    Y  +IDG CK
Sbjct: 688 LDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCK 747

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVT----------------------------------F 510
            G++ +A  +  +M ++   PD                                     F
Sbjct: 748 NGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLF 807

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + L+ G C +GR+ E   + + M+     P+  TV ++I+   K G   EA R+     +
Sbjct: 808 STLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867

Query: 571 DQNLQ 575
            +  Q
Sbjct: 868 KKASQ 872



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 201/413 (48%), Gaps = 3/413 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  R + ++N    TYN+++  LC  G  +      + M   G  P++      ++  
Sbjct: 268 FEEMRRRDCAMNEV--TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL 325

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + G+   AK LL +     +  +  +Y +L++  +K+  A EA  +  E      QP+ 
Sbjct: 326 CKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNK 385

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             ++ LI+GL +IG++ +A +   +M   G  PD  TY+ L+ G  +  +     ELL E
Sbjct: 386 IMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNE 445

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++  S   P+  TY  +I+G C+ G+  +A  +  EM S G+KP+A  +  LI G  K G
Sbjct: 446 MR-NSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEG 504

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           ++  A    E M     LPD+  ++SLI G    G++ +  +   +++ + L P+ +T++
Sbjct: 505 HISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYS 564

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+  CK   L  A + L+Q+  + L P    Y  +++G+ K+ + ++ + I+  M   
Sbjct: 565 GLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS 624

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             KPD   + I+I        M  A  +  ++ + G  PD    +SLIS L K
Sbjct: 625 GDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCK 677



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 186/433 (42%), Gaps = 69/433 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++  LC+ G       + + M S+G  PN+ M    +    + G    A   L   
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F YNSL+  L      +EA   + +  +    PD +T++ LI G  +   +
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNL 576

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK----------------- 320
           +KA +    M + G  P+  TY  L+ G  + N+  +   +L+                 
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIV 636

Query: 321 ----------EVKF-------KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                     EV F       K+   PD+  Y+S+ISG CK+  M+KA G+ +EM   G+
Sbjct: 637 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P  V +N LIDGF + G++  A  + + +L+ G LP+ VT+++LIDG C+NG +     
Sbjct: 697 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFD 756

Query: 424 LCDEMKGKNLSPNVYT----------------------------------FTILINALCK 449
           L  +M  + ++P+ +                                   F+ L+   CK
Sbjct: 757 LYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCK 816

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             RL +  + L  +   ++VP       VI  F KAG + EA+ + AE+++K+       
Sbjct: 817 RGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTD 876

Query: 510 -FTILIIGHCMKG 521
            F++L      KG
Sbjct: 877 RFSLLFTDMINKG 889



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 76/162 (46%)

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+D Y +NG +    ++   M    L+P       L+  L + + +    +    ++   
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P  + Y+  ++  CKA + D A  +  EM  + C  ++VT+ ++I G C  G + EA 
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
               +M+  G +PD  T  +L++ L KGG   EA  ++   S
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS 342


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 218/455 (47%), Gaps = 12/455 (2%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM 182
           LN L  I+R+D     +  + F  + ++ +      Y  V+RS CE+      + +   M
Sbjct: 200 LNGLAKIRRVD-----MVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM 254

Query: 183 RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
            S     N  +    +    +  +   A  + +      +T S   Y +L+  L K    
Sbjct: 255 ESSD--LNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           +    +  E   L   P     + L++GL R G+V  AF+    +   G  P +  YN L
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+ LC+  +      L KE+  K   + DV TY+ +I  +C+ GK+D A     +M   G
Sbjct: 373 INSLCKDGKFDEAELLFKEMGEKGLCANDV-TYSILIDSFCRRGKLDTAIHFLGKMIMAG 431

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           IK +   +N LI+G  K+GN+ +A    + M+  G  P VV+++SLI GYC  G+L++  
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L  EM GK ++PN YTFT LI+AL + NR+ DA R   ++   +++P    YN +I+G 
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGH 551

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK GN  +A  ++ +M +K   PD  T+  LI   C  GR+ EA    + + R     ++
Sbjct: 552 CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNE 611

Query: 543 ITVNSLISCLLKGGMPNEAF---RIMQRASEDQNL 574
           +  ++L+    K G   +A    R M +   D +L
Sbjct: 612 MCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDL 646



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 195/410 (47%), Gaps = 1/410 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   YN ++ SLC+ G  D  +++F  M   G   N       + S  R GK D A   L
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     + ++ + YNSL+N   K  N   AV  F E      +P   ++  LI G    
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++ +AF  +++M   G +P+  T+ TLIS L R N +     L  E+  +    P+ VT
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEM-LEQNMMPNEVT 543

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I G+CK G   KA  + N+M   G+ P   T+  LI      G +  A+   + + 
Sbjct: 544 YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
              +  + + +S+L+ GYC+ G+L   L +C EM  + +  ++  + +LI+   KE   +
Sbjct: 604 REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTS 663

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
                LK +    L P   +Y  +IDG+ KAG+V +A  I   M ++ C P+ VT+T LI
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              C  G M +A  ++ +ML     P+ +T    +  L + G   +A ++
Sbjct: 724 NELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 196/440 (44%), Gaps = 35/440 (7%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C++G   +    FD M   G  P        +S     GK   A  L  +  
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +T+ + +L++AL + N   +A  +F E       P+  T+N++I+G  + G   
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTV 558

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KAFE    M   G  PD  TY  LIS LC    V    + + ++  +  F  + + Y+++
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH-REHFKLNEMCYSAL 617

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GYCK G++  A G+  EM   G+    V + VLIDG  K  +  +   + + M     
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD V ++S+IDGY + G + +   + D M  +  +PN+ T+T LIN LCK   ++ A  
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737

Query: 459 FLKQLKWNDLVPKPFMY----------------------------------NPVIDGFCK 484
             K++  ++  P    Y                                  N ++ GFCK
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCK 797

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G V+EA  ++ EM +    PD +T++ +I   C +G +  AI  ++ ML  G  PD + 
Sbjct: 798 LGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLA 857

Query: 545 VNSLISCLLKGGMPNEAFRI 564
            N LI      G   +AF +
Sbjct: 858 YNFLIYGCCIAGELGKAFEL 877



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 210/454 (46%), Gaps = 22/454 (4%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE--- 195
            L+F  F  ++ + NHS  ++ +++ +L    L      +   +   G L    + E   
Sbjct: 88  ALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALL 147

Query: 196 ---------------FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
                            + S ++  +   +  +    R  E+         +LN L K  
Sbjct: 148 DCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIR 207

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
             D  + +F E   +  +PD + +  +I+    +    KA E    M S     ++V YN
Sbjct: 208 RVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMES--SDLNVVVYN 265

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI GLC+   V    E+ K    +   +   VTY +++ G CK+ + +   G+ +EM  
Sbjct: 266 VLIHGLCKNKRVWEAVEI-KNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIE 324

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G  P+    + L++G  + G +V A  +  R+   G +P +  +++LI+  C++G+ ++
Sbjct: 325 LGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDE 384

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              L  EM  K L  N  T++ILI++ C+  +L+ A  FL ++    +    + YN +I+
Sbjct: 385 AELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLIN 444

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK GN+  A     EM +K  KP  V++T LI G+C KG++ EA  ++++M   G AP
Sbjct: 445 GHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAP 504

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           +  T  +LIS L +     +AFR+     E QN+
Sbjct: 505 NTYTFTTLISALFRANRMTDAFRLFDEMLE-QNM 537



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 174/359 (48%), Gaps = 7/359 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P E  +S     SL+  L ++    +A  +     ++ + P  + +N LI  L + G+
Sbjct: 327 FVPTEAALS-----SLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK 381

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A   F +MG  G   + VTY+ LI   CR  ++      L ++   +     V  Y 
Sbjct: 382 FDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM-IMAGIKITVYPYN 440

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I+G+CKLG +  A   ++EM   G+KP+ V++  LI G+   G +  A  +   M   
Sbjct: 441 SLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK 500

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+  TF++LI    R  ++    +L DEM  +N+ PN  T+ ++I   CKE     A
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKA 560

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L Q+    LVP  + Y P+I   C  G V EA   + ++  +  K +++ ++ L+ G
Sbjct: 561 FELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHG 620

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           +C +GR+ +A+ +  +M++ G   D +    LI   +K    +  F +++    DQ L+
Sbjct: 621 YCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNM-HDQRLR 678



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 172/371 (46%), Gaps = 2/371 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +FD M     +PN       +    + G    A  LL+Q     +   T+ Y  L+++L 
Sbjct: 528 LFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLC 587

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                 EA     +  R + + +   ++ L+ G  + G ++ A     +M   G   D+V
Sbjct: 588 STGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLV 647

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            Y  LI G  +  + +    LLK +       PD V YTS+I GY K G + KA GI++ 
Sbjct: 648 CYAVLIDGTIKEQDTSAVFGLLKNMH-DQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VT+  LI+   K G M  AE + + ML     P+ VT+   +D   R G 
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGS 766

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + + ++L ++M  K L  N  ++ IL+   CK  R+ +A + L ++  N + P    Y+ 
Sbjct: 767 MEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST 825

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I   C+ GN+D A      M  K  KPD + +  LI G C+ G + +A  + + M+R G
Sbjct: 826 IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG 885

Query: 538 CAPDDITVNSL 548
             P+  T  SL
Sbjct: 886 VKPNQATHKSL 896



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 164/352 (46%), Gaps = 2/352 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G       + + M   G +P++      +SS    G+   AK  +   
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++   Y++LL+   K+    +A+ + +E  +     D   + +LI G  +  + 
Sbjct: 603 HREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDT 662

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
              F    +M      PD V Y ++I G  +   V +   +  ++      +P++VTYT+
Sbjct: 663 SAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIW-DIMIDEGCTPNIVTYTT 721

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK G MDKA  ++ EM      P+ VT+   +D   + G+M  A  +   ML  G
Sbjct: 722 LINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-G 780

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            L + V+++ L+ G+C+ G++ +  KL DEM    + P+  T++ +I   C+   L+ A 
Sbjct: 781 LLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAI 840

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            F   +    L P    YN +I G C AG + +A  +  +M  +  KP++ T
Sbjct: 841 EFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQAT 892


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 197/377 (52%), Gaps = 3/377 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV-SSCIRAGKCDAAKGLLSQ 216
           TYN ++R LC  G   +   V D M     +P+       + ++C R+G   A K LL +
Sbjct: 34  TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK-LLDE 92

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R    T     YN ++N + ++   D+A+   K       +P+T ++NI+++GL     
Sbjct: 93  MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A E   +MG  GC P++VT+N LIS LCR   V    E+L+++  K   +P+ ++Y 
Sbjct: 153 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP-KYGCTPNSLSYN 211

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++  +CK  KMDKA    + M S G  P  V++N L+    + G +  A  +  ++   
Sbjct: 212 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P +++++++IDG  + G+  + L+L +EM  K L P++ T++ +   LC+E+R+ DA
Sbjct: 272 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 331

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R   +++   + P   +YN +I G CK      A  + A M    C P++ T+TILI G
Sbjct: 332 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 391

Query: 517 HCMKGRMVEAISIFNKM 533
              +G + EA  + +++
Sbjct: 392 LAYEGLIKEARDLLDEL 408



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 187/375 (49%), Gaps = 21/375 (5%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG+ DAA+ L+++     V    + YN+L+  L  +     A+ +  E  R    PD  T
Sbjct: 13  AGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVT 69

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           + IL++   +    K+A +   +M   GC+PDIVTYN +++G+C+   V    E LK + 
Sbjct: 70  YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 129

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P+ V+Y  V+ G C   + + A  +  EM   G  P+ VTFN+LI    + G +
Sbjct: 130 SYG-CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 188

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + E++  +G  P+ ++++ L+  +C+  ++++ +   D M  +   P++ ++  L
Sbjct: 189 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTL 248

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           + ALC+   ++ A   L QLK     P    YN VIDG  KAG   EA  ++ EM  K  
Sbjct: 249 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 308

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK--------- 554
           +PD +T++ +  G C + R+ +AI  F K+  +G  P+ +  N++I  L K         
Sbjct: 309 QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAID 368

Query: 555 --------GGMPNEA 561
                   G MPNE+
Sbjct: 369 LFAYMIGNGCMPNES 383



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 202/418 (48%), Gaps = 8/418 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++   C  G  D+ + +   M  +   P++      +      G+   A  +L + 
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y  LL A  K++   +A+ +  E       PD  T+N+++ G+ + G V
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A EF  ++ S+GC P+ V+YN ++ GLC         EL+ E+  K    P+VVT+  
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG-CPPNVVTFNM 177

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +IS  C+ G ++ A  +  ++   G  P+++++N L+  F K   M  A    + M+S G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V++++L+   CR+G+++  ++L  ++K K  +P + ++  +I+ L K  +  +A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++    L P    Y+ +  G C+   +++A     ++++   +P+ V +  +I+G 
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ----RASED 571
           C +     AI +F  M+  GC P++ T   LI  L   G+  EA  ++     RA E+
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEE 415



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 137/300 (45%), Gaps = 31/300 (10%)

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVK-------------------------------FK 325
           + YN +++G C   ++     L+ E+                                 +
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PDVVTYT ++   CK     +A  + +EM   G  P  VT+NV+++G  + G +  
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A    + + S+G  P+ V+++ ++ G C   +     +L  EM  K   PNV TF +LI+
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC++  +  A   L+Q+      P    YNP++  FCK   +D+A   +  M  + C P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D V++  L+   C  G +  A+ + +++   GCAP  I+ N++I  L K G   EA  ++
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 198/405 (48%), Gaps = 7/405 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRA 204
           + LS   S  TYN ++  L   G    V+ V+D    M ++G +P        +   +++
Sbjct: 267 MRLSKKASSFTYNPLITGLLARG---CVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQS 323

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G  +AA+   ++ R   +      YNSLLN   K  N  EA+ +F +  R    P   T+
Sbjct: 324 GLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTY 383

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           NI I G  R+G++++A     +MG  GC P++ TY  L+ G   V  +A   E   E+  
Sbjct: 384 NIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLS 443

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    PD   Y + I     LG + +A  +   +   GI    VT+N+LI G  K GN+ 
Sbjct: 444 KG-LQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLK 502

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A+ ++ +M+S G  PD +T++ LI  +C  G L +  K+ + M    L P+  TFT++I
Sbjct: 503 DAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVII 562

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +A C+   L  A  + +++    + P    YN +I   C+ G    A+    EM E+   
Sbjct: 563 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLV 622

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            +K T+T+LI G+C  G   +A+  + +M + G  PD +T  +L+
Sbjct: 623 ANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALV 667



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 199/411 (48%), Gaps = 4/411 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYM--RSDGHLPNSPMIEFFVSSCIRAG 205
           + L +  S  TYN ++ S  + G  D V ++   M  R  G LPN       ++   R G
Sbjct: 196 LQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKG 255

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             + A  L+   R  +   S+F YN L+  L+ +    +   +  E       P   T+N
Sbjct: 256 DLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 314

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            +I GL + G V+ A   F +M + G  PD++TYN+L++G C+   +     L  +++ +
Sbjct: 315 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR-R 373

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +  +P V+TY   I GYC+LG +++A  +  EM   G  P+  T+ +L+ G   V ++  
Sbjct: 374 AGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAM 433

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A    + MLS G  PD   +++ I      G + + L+L + +  + +S +  T+ ILI+
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK   L DA+    ++  N L P    Y  +I   C+ G + EA  I   M      P
Sbjct: 494 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 553

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             VTFT++I  +C +G +  A   F KML  G  P++IT N LI  L + G
Sbjct: 554 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 604



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 207/425 (48%), Gaps = 20/425 (4%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K  N V+R+L +    D +  V + M   G  P+       + S ++ G+ D    LL +
Sbjct: 170 KDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKE 229

Query: 217 FR-------PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
                    P +VT     YN ++  L ++ + +EA  +  E  RL  +  ++T+N LI 
Sbjct: 230 METRGSGCLPNDVT-----YNVVITGLTRKGDLEEAAELV-EGMRLSKKASSFTYNPLIT 283

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL   G VKK ++   +M + G  P +VTYN +I GL +   V        E++      
Sbjct: 284 GLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMG-LL 342

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV+TY S+++GYCK G + +A  ++ ++   G+ P+ +T+N+ IDG+ ++G++  A  +
Sbjct: 343 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARIL 402

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           +E M   G LP+V T++ L+ G      L    +  DEM  K L P+ + +   I   C 
Sbjct: 403 KEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI---CA 459

Query: 450 ENRLNDARRFLKQ---LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           E  L D  R L+    L    +      YN +I G CK GN+ +A  +  +M     +PD
Sbjct: 460 ELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 519

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +T+T LI  HC +G + EA  IFN M+  G  P  +T   +I    + G    A+   +
Sbjct: 520 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 579

Query: 567 RASED 571
           +  E+
Sbjct: 580 KMLEE 584



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 176/374 (47%), Gaps = 1/374 (0%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           L+    N  +  +  TYN ++  L + GL ++ QV F  MR+ G LP+       ++   
Sbjct: 297 LQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYC 356

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           +AG    A  L    R   +  +   YN  ++   +  + +EA  + +E       P+  
Sbjct: 357 KAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVC 416

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL++G   +  +  A EFF +M S G  PD   YNT I     + ++AR  EL +EV
Sbjct: 417 TYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALEL-REV 475

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                 S D VTY  +I G CK G +  A  +  +M S G++P  +T+  LI    + G 
Sbjct: 476 LMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGL 535

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  +   M+S G LP  VTF+ +I  YCR G L        +M  + + PN  T+ +
Sbjct: 536 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 595

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+ALC+  R   A     ++    LV   + Y  +IDG CK GN ++A     EM +  
Sbjct: 596 LIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG 655

Query: 503 CKPDKVTFTILIIG 516
             PD +T   L+ G
Sbjct: 656 IHPDYLTHKALVKG 669



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 4/246 (1%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +PDV     V+       + D    ++ EM   GI+PS VT+N L+D F K G       
Sbjct: 166 APDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAM 225

Query: 389 MRERMLSFGY--LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + + M + G   LP+ VT++ +I G  R G L +  +L + M+    + + +T+  LI  
Sbjct: 226 LLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS-FTYNPLITG 284

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           L     +        +++   ++P    YN +I G  ++G V+ A V  AEM      PD
Sbjct: 285 LLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPD 344

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +T+  L+ G+C  G + EA+ +F  + R G AP  +T N  I    + G   EA RI++
Sbjct: 345 VITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEA-RILK 403

Query: 567 RASEDQ 572
               +Q
Sbjct: 404 EEMGEQ 409



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K L+   V+  L     TY  ++ + CE GL    + +F+ M SDG LP++      + +
Sbjct: 505 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 564

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             R G   +A G   +     V  +   YN L++AL +      A + F E        +
Sbjct: 565 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 624

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
            +T+ +LI G  ++G  + A  F+++M   G  PD +T+  L+ G
Sbjct: 625 KYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKG 669



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 414 RNGQLNQGLKLC----DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           R+  L+    LC     EM    ++P+V     ++ AL    R +D     +++    + 
Sbjct: 142 RDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIE 201

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK--RCKPDKVTFTILIIGHCMKGRMVEAI 527
           P    YN ++D F K G  D+  +++ EME +   C P+ VT+ ++I G   KG + EA 
Sbjct: 202 PSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAA 261

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            +   M R+       T N LI+ LL  G
Sbjct: 262 ELVEGM-RLSKKASSFTYNPLITGLLARG 289


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 178/363 (49%), Gaps = 38/363 (10%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P   F   +SS ++  +      L  QF P  +T      + L+N      +   A 
Sbjct: 57  PPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAF 116

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F    +    P+  T N LI+GL   GE+K+A  F   + + G   D V+Y TLI+GL
Sbjct: 117 SVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGL 176

Query: 307 CRVNE---VAR------GH--------------------------ELLKEVKFKSEFSPD 331
           C+  E   VAR      GH                          +L  E+  K   SP+
Sbjct: 177 CKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKG-ISPN 235

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TYT++I G+C +G + +A  + NEM    I P   TFN+LID   K G +  A  + E
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFE 295

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M      P++VT++SLIDG C+N  L + + LC +MK + + PNVY++TIL++ALCK  
Sbjct: 296 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGG 355

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           RL +A++F + L           YN +I+G CKAG   +   + ++ME K C P+ +TF 
Sbjct: 356 RLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFK 415

Query: 512 ILI 514
            +I
Sbjct: 416 TII 418



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 155/306 (50%), Gaps = 1/306 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +++ LC  G         D + + G   +       ++   +AG+  A   LL + 
Sbjct: 133 TLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL 192

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V     MY ++++ L K     +A  ++ E       P+ +T+  LI G   +G +
Sbjct: 193 EGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNL 252

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+AF    +M     +PD+ T+N LI  L +  ++     L +E+K K+ F P++VTYTS
Sbjct: 253 KEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMF-PNIVTYTS 311

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK   +++A  +  +M   GI+P+  ++ +L+D   K G + +A+   + +L  G
Sbjct: 312 LIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKG 371

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y  +V T++ +I+G C+ G     + L  +M+GK   PN  TF  +I AL +++  + A 
Sbjct: 372 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAE 431

Query: 458 RFLKQL 463
           +FL+++
Sbjct: 432 KFLREM 437



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 144/282 (51%), Gaps = 2/282 (0%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P    +N ++S L +         L K+ +  +  +PD+ T + +I+ +C L  +  A  
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFE-PNGITPDLCTLSILINCFCHLTHITFAFS 117

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           ++  +   G  P+A+T N LI G    G +  A +  +++++ G+  D V++ +LI+G C
Sbjct: 118 VFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC 177

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G+     +L  +++G ++ P++  +T +I+ LCK   L DA     ++    + P  F
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            Y  +I GFC  GN+ EA  ++ EM+ K   PD  TF ILI     +G++ EA+S+F +M
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
                 P+ +T  SLI  L K      A  + ++  E Q +Q
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE-QGIQ 338



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 1/276 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G   +V  +   +      P+  M    +    +      A  L S+ 
Sbjct: 168 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEM 227

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ + F Y +L++      N  EA  +  E       PD +TFNILI  L++ G++
Sbjct: 228 IVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKI 287

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M      P+IVTY +LI GLC+ + + R   L K++K +    P+V +YT 
Sbjct: 288 DEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMK-EQGIQPNVYSYTI 346

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK G+++ A   +  +   G   +  T+NV+I+G  K G       ++ +M   G
Sbjct: 347 LLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKG 406

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +P+ +TF ++I       + ++  K   EM  + L
Sbjct: 407 CMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 5/250 (2%)

Query: 154 HSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           HS K     Y  ++  LC+  L      ++  M   G  PN       +      G    
Sbjct: 195 HSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKE 254

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  LL++ +   +    + +N L++AL K+   DEA+ +F+E       P+  T+  LI 
Sbjct: 255 AFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLID 314

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL +   +++A      M   G  P++ +Y  L+  LC+   +    +  + +  K  + 
Sbjct: 315 GLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKG-YH 373

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            +V TY  +I+G CK G       + ++M   G  P+A+TF  +I    +      AE  
Sbjct: 374 LNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKF 433

Query: 390 RERMLSFGYL 399
              M++ G L
Sbjct: 434 LREMIARGLL 443



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 74/172 (43%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+N+++ +L + G  D    +F+ M+     PN       +    +    + A
Sbjct: 266 NINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERA 325

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  + +   +  + + Y  LL+AL K    + A   F+         +  T+N++I G
Sbjct: 326 IALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMING 385

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           L + G      +    M   GC P+ +T+ T+I  L   +E  +  + L+E+
Sbjct: 386 LCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREM 437


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 210/441 (47%), Gaps = 37/441 (8%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +M+  C  G  DS   +F+ +  DG  PN       +  C  +G  + A  L +Q +   
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +  S F  NSLL   +K    +EA  +F E        + +T+NI++  L + G++ +A 
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC-GVANIFTYNIMMSWLCKGGKMDEAC 449

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M + G  P++V+YN +I G CR   +     +  ++    +  P+VVTY+ +I G
Sbjct: 450 SLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM-LARDLKPNVVTYSILIDG 508

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI--------------------------- 374
             K G  +KA  ++++M S  I P+  TFN +I                           
Sbjct: 509 NFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPS 568

Query: 375 --------DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
                   DGF K GN+ SA  +   M  FG  P+VVT++SLI+G+C++ +++  LK  D
Sbjct: 569 CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRD 628

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM+ K L  +V  ++ LI+  CK   +  A+    +L    L P   +YN +I GF    
Sbjct: 629 EMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLN 688

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           N++ A V   +M   R   D  T+T LI G   +GR+V A  ++ +ML  G  PD IT +
Sbjct: 689 NMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFH 748

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
            L++ L   G    A +I++ 
Sbjct: 749 VLVNGLCNKGQLENARKILEE 769



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 206/400 (51%), Gaps = 5/400 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++M  LC+ G  D    + D M + G +PN       +    R G  D A  + S  
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++  +   Y+ L++   K+ ++++A+ +F +   L   P  +TFN +I GL ++G++
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF--SPDVVTY 335
            +A +   +    G  P  +TYN+++ G  +   +     + +E+    EF  SP+VVTY
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM---CEFGVSPNVVTY 607

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           TS+I+G+CK  ++D A    +EM   G++     ++ LIDGF K  +M SA+ +   +L 
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ + ++S+I G+     +   L    +M    +  ++ T+T LI+ L KE RL  
Sbjct: 668 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 727

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     ++    +VP    ++ +++G C  G ++ A  I+ EM+ K   P  + +  LI 
Sbjct: 728 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 787

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           G+  +G + EA ++ ++ML  G  PDD+T + LI+   KG
Sbjct: 788 GYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 827



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 187/369 (50%), Gaps = 1/369 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +  +  +YN ++   C  G  D    VF  M +    PN       +    + G  
Sbjct: 456 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 515

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  L  Q     +  + F +N+++N L K     EA    K +      P   T+N +
Sbjct: 516 EKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSI 575

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + G  + G +  A   + +M  FG SP++VTY +LI+G C+ N +    +   E++ K  
Sbjct: 576 VDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG- 634

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              DV  Y+++I G+CK   M+ A  ++ E+   G+ P+ + +N +I GF  + NM +A 
Sbjct: 635 LELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAAL 694

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              ++M++     D+ T+++LIDG  + G+L     L  EM  K + P++ TF +L+N L
Sbjct: 695 VWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGL 754

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C + +L +AR+ L+++   ++ P   +YN +I G+ + GN+ EA  +  EM ++   PD 
Sbjct: 755 CNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDD 814

Query: 508 VTFTILIIG 516
           VT+ ILI G
Sbjct: 815 VTYDILING 823



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 196/406 (48%), Gaps = 4/406 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N ++R   +  L +    +FD    D  + N       +S   + GK D A  LL     
Sbjct: 399 NSLLRGYLKAPLWEEASKLFDEA-VDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVN 457

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +  +   YN ++    ++ N D A  +F +      +P+  T++ILI G  + G+ +K
Sbjct: 458 QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEK 517

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A + F  M S   +P   T+NT+I+GLC+V +++   + LK    +  F P  +TY S++
Sbjct: 518 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF-LEEGFIPSCMTYNSIV 576

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G+ K G +D A  +Y EM   G+ P+ VT+  LI+GF K   +  A   R+ M   G  
Sbjct: 577 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 636

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            DV  +S+LIDG+C+   +     L  E+    LSPN   +  +I+     N +  A  +
Sbjct: 637 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 696

Query: 460 LKQLKWNDLVPKPF-MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            K++  ND +P     Y  +IDG  K G +  A+ +  EM  K   PD +TF +L+ G C
Sbjct: 697 YKKM-INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLC 755

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            KG++  A  I  +M R    P  +  N+LI+   + G   EAF +
Sbjct: 756 NKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTL 801



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 198/401 (49%), Gaps = 37/401 (9%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           + +++ IRA + + A    +     +V       N LL ALV++N   E   ++ +    
Sbjct: 155 YLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLR 214

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
               D +T +++++   + G V++A E+F +    G   D   Y+ +I  +C+      G
Sbjct: 215 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 274

Query: 316 HELLKEVKFKSEFSPDVVTYTSVI-----------------------------------S 340
            ELL+E+K +  + P   T+TSVI                                    
Sbjct: 275 LELLEEMKERG-WVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMK 333

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           GYC  G +D A  ++N++   G+ P+ VT++VLI+G    GN+  A  +  +M   G  P
Sbjct: 334 GYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 393

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
            V   +SL+ GY +     +  KL DE     ++ N++T+ I+++ LCK  ++++A   L
Sbjct: 394 SVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLL 452

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
             +    +VP    YN +I G C+ GN+D A+ + ++M  +  KP+ VT++ILI G+  K
Sbjct: 453 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 512

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           G   +A+ +F++ML +  AP D T N++I+ L K G  +EA
Sbjct: 513 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 553



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 192/413 (46%), Gaps = 2/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++R+  + G  +  +  F   +  G   ++      + +  +    +    LL + 
Sbjct: 222 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 281

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      S   + S++ A V Q N  EA+ + +E        +      L++G    G +
Sbjct: 282 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 341

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  +   G  P+ VTY+ LI G C    + +  EL  ++K      P V    S
Sbjct: 342 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG-IPPSVFNVNS 400

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY K    ++A+ +++E   CG+  +  T+N+++    K G M  A  + + M++ G
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQG 459

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+VV+++ +I G+CR G ++    +  +M  ++L PNV T++ILI+   K+     A 
Sbjct: 460 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 519

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q+   ++ P  F +N +I+G CK G + EA   +    E+   P  +T+  ++ G 
Sbjct: 520 DLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGF 579

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +G +  A++++ +M   G +P+ +T  SLI+   K    + A +      E
Sbjct: 580 IKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 632



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 1/295 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC++G     +        +G +P+       V   I+ G  D+A  +  + 
Sbjct: 536 TFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM 595

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+ +   Y SL+N   K N  D A+    E      + D   ++ LI G  +  ++
Sbjct: 596 CEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDM 655

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A + F+++   G SP+ + YN++ISG   +N +       K++        D+ TYT+
Sbjct: 656 ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM-INDRIPCDLGTYTT 714

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K G++  A+ +Y EM S GI P  +TF+VL++G    G + +A  + E M    
Sbjct: 715 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 774

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
             P V+ +++LI GY R G L +   L DEM  + L P+  T+ ILIN   K +R
Sbjct: 775 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 2/307 (0%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D   FN L+    R   ++ A + F  M      P +   N L++ L R N +    +L 
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            ++  +  +  D  T   ++    K G++++A   + E    G+K  A  ++++I    K
Sbjct: 209 NKMVLRGIYG-DHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK 267

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
             N      + E M   G++P   TF+S+I      G + + L+L +EM       N+  
Sbjct: 268 KPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVV 327

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
            T L+   C +  L+ A     ++  + L P    Y+ +I+G C +GN+++A+ +  +M+
Sbjct: 328 ATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK 387

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
                P       L+ G+       EA  +F++ +  G A +  T N ++S L KGG  +
Sbjct: 388 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMD 446

Query: 560 EAFRIMQ 566
           EA  ++ 
Sbjct: 447 EACSLLD 453



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 93/203 (45%)

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            FN L++ + +   + +A      M+    +P V   + L+    R   + +   L ++M
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             + +  + +T  +++ A  KE R+ +A  + ++ K   +      Y+ +I   CK  N 
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           +    ++ EM+E+   P + TFT +I+    +G MVEA+ +  +M+  G   + +   SL
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 331

Query: 549 ISCLLKGGMPNEAFRIMQRASED 571
           +      G  + A  +  + +ED
Sbjct: 332 MKGYCAQGNLDSALNLFNKITED 354



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 2/173 (1%)

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           F +  D   F+ L++ Y R  ++   +   + M  +++ P V    IL+ AL + N + +
Sbjct: 144 FDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGE 203

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
            R    ++    +    F  + ++    K G V+EA     E +E+  K D   ++I+I 
Sbjct: 204 LRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQ 263

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI-SCLLKGGMPNEAFRIMQR 567
             C K      + +  +M   G  P + T  S+I +C+ +G M  EA R+ + 
Sbjct: 264 AVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV-EALRLKEE 315


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 212/454 (46%), Gaps = 46/454 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N+++RS       D     F+ M+     P+       V    +AG  + A  +  + 
Sbjct: 156 SFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEM 215

Query: 218 RP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G V     ++ +++  L+K     EA  +F +  +    PD   +N +I GL++ G 
Sbjct: 216 MAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            ++A +   +M +  C P  VTY  L++ LC+   + R  EL + V   S F P+ V YT
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR-VMAASGFRPNSVIYT 334

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-----EYMR- 390
           S+I G+ K G+M +A  +++EM   G +P  +T  V+IDG  K GN   A     E MR 
Sbjct: 335 SLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG 394

Query: 391 -----------------------------ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
                                        + M++ G  PD VT+  L+DG+C+ G+L++ 
Sbjct: 395 GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEA 454

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCK----ENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +L DE+   + SPN+  ++ L+  LC     EN L+D     +Q K       P +   
Sbjct: 455 AQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDD---LFEQSKAAAENLDPGLCCS 511

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC--MKGRMVEAISIFNKMLR 535
           +I G CK G +DEA  I   M  + CKPD  T+ ILI G C   + R+  A ++ + +  
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +G  PD +T   L   L K G  + A ++++ AS
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 203/463 (43%), Gaps = 38/463 (8%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           V++ L      + F  ++       H   TYN +M  L     +     + + M   G  
Sbjct: 92  VLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIA 151

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN+      + S  R  + D A       +          +  L++ L K    ++A  +
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV 211

Query: 249 FKEYFRL-YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           F E   + +  PD      +++ L +   VK+A E F  M   G  PD + YNT+I GL 
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLA 271

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +        ++L  +  K+   P  VTY  +++  CK G +++A  ++  M + G +P++
Sbjct: 272 KAGHAQEALKVLDNMLAKA-CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNS 330

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V +  LI GF K G M  A  + + M+  GY PDV+T + +IDG C++G   Q  K  +E
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEE 390

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M      PNV T+T +I  L K  R+ +A R +K +  +   P    Y  ++DGFCK G 
Sbjct: 391 MMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGR 450

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTIL---------------------------------- 513
           +DEA  ++ E+++    P+   ++ L                                  
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC 510

Query: 514 --IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             I+G C  GR+ EA  IF +M+  GC PD  T N LI+ L +
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCR 553



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 3/356 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            F YN L+N LV + N  +   + +E  +    P+T++FNILI+  +R      A   F 
Sbjct: 119 VFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFE 178

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M    C PD+ T+  L+  LC+     +  E+  E+       PD   +T+++    K 
Sbjct: 179 IMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKA 238

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            ++ +A  ++ +M  CG  P A+ +N +IDG  K G+   A  + + ML+   +P  VT+
Sbjct: 239 KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTY 298

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
             L++  C+ G L +  +L   M      PN   +T LI+   K  R+ +A     ++  
Sbjct: 299 GILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    +  +IDG CK+GN ++A     EM    CKP+ VT+T +I G    GR+  
Sbjct: 359 AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVAN 418

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---MQRASEDQNLQLPS 578
           A  I   M+  GC PD +T   L+    K G  +EA ++   + + S   NLQL S
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 205/483 (42%), Gaps = 75/483 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ SLC+ G  +  + +F  M + G  PNS +    +    ++G+   A  L  + 
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +  +++ L K  N ++A   F+E  R   +P+  T+  +IQGLS+IG V
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AF     M + GC PD VTY  L+ G C++  +    +LL E+  K   SP++  Y+S
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD-KCSSSPNLQLYSS 475

Query: 338 ------------------------------------VISGYCKLGKMDKATGIYNEMNSC 361
                                               +I G CK G++D+A  I+  M S 
Sbjct: 476 LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535

Query: 362 GIKPSAVTFNVLIDGFG-------------------------------------KVGNMV 384
           G KP A T+N+LI+G                                       K+G + 
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVD 595

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  M E   S G+  DVV +++L  G C  GQ+++ + L  EM  +  +P+   +  +I
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-NVIVAEMEEKRC 503
           N L K  +L DA +F  ++      P    Y  ++   C AGNVDEA +     +     
Sbjct: 656 NGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGEL 715

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
               + +  LI G C   ++  A+ +F  M+  G  P  +T  SL   L++ G   +A  
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQE 775

Query: 564 IMQ 566
           ++Q
Sbjct: 776 LLQ 778



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 169/336 (50%), Gaps = 2/336 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +  +TF +N L+ +  +   AD+AV  F+   R   +PD  TF IL+  L + G  +KAF
Sbjct: 150 IAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAF 209

Query: 282 EFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
           E F++M + G   PD   +  ++  L +   V    E+  +++ K  F PD + Y ++I 
Sbjct: 210 EVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQME-KCGFPPDAIAYNTMID 268

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G  K G   +A  + + M +    P+ VT+ +L++   K G +  AE +   M + G+ P
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           + V ++SLI G+ ++G++ +   L DEM      P+V T T++I+ LCK      A +  
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           +++      P    Y  +I G  K G V  A  I+  M    C PD VT+  L+ G C  
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           GR+ EA  + +++ +   +P+    +SL+  L  GG
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG 484



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 190/413 (46%), Gaps = 5/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++ L ++G   +   +   M + G  P+S      +    + G+ D A  LL + 
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVY-MFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + +  +Y+SL+  L    + +  +  +F++        D      +I GL + G 
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGR 521

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV--NEVARGHELLKEVKFKSEFSPDVVT 334
           + +A   F  M S GC PD  TYN LI+GLCR   N V R   LL +++    + PD VT
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVG-YLPDAVT 580

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT +  G CK+G++D+A  +  E +S G     V +  L  G    G +  A  + + M+
Sbjct: 581 YTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMV 640

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD   +  +I+G  +  +L    K  DEM GK   P V T+T L+ ALC    ++
Sbjct: 641 RQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVD 700

Query: 455 DA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +A  RF   L   +LV    +Y+ +I GFCKA  VD A  +  +M  +   P  VT   L
Sbjct: 701 EAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASL 760

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             G    G+  +A  +  +M   G  P   T  +++  L K     +  +++Q
Sbjct: 761 FDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQ 813



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 169/382 (44%), Gaps = 43/382 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD-AAKGLLSQ 216
           TY  ++   C++G  D    + D +      PN  +    V      G  +     L  Q
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQ 496

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL--SRI 274
            +     +   +  S++  L K    DEA  +F+       +PD  T+NILI GL  SR 
Sbjct: 497 SKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             V++AF   +D+   G  PD VTY  L  GLC++ EV R  ++L+E   +  ++ DVV 
Sbjct: 557 NRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG-WNADVVA 615

Query: 335 YTSVISGYCKLGKMDKATGIYNEM--------------------------NSC------- 361
           YT++ +G C  G++D+A  ++ EM                          ++C       
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMI 675

Query: 362 --GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQL 418
             G KP+  T+  L+      GN+  A +  E ML+ G L   V+ + +LI G+C+  ++
Sbjct: 676 GKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKV 735

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           +  LKL ++M  +   P   T   L + L +  +   A+  L+++      P    +  +
Sbjct: 736 DAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAI 795

Query: 479 IDGFCKAGNVDEANVIVAEMEE 500
           +DG  K+   DE+  ++  ++E
Sbjct: 796 LDGLRKS---DESGKLLKLVQE 814



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 106/238 (44%), Gaps = 1/238 (0%)

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           ++ F  DV TY  +++         +   I+ EM   GI P+  +FN+LI  F +     
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVYTFTIL 443
            A    E M      PD+ TF  L+D  C+ G   +  ++  EM     + P+    T +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           +  L K  R+ +AR    Q++     P    YN +IDG  KAG+  EA  ++  M  K C
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            P +VT+ IL+   C  G +  A  +F  M   G  P+ +   SLI    K G   EA
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 215/444 (48%), Gaps = 39/444 (8%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +T+N V+  LC+ G       + D M       ++ +  + +    R GK D A+ +LS+
Sbjct: 271 QTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSK 330

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             P     +T +YN+L+N  V     +EA   ++K       +PD +TFNI+I GL + G
Sbjct: 331 I-PNP---NTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR--------------------------- 308
            +  A EF  +M   G  P+++TY  LI G C+                           
Sbjct: 387 YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446

Query: 309 --VNEVARGHELLKEVKFKSEFS-----PDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
             +  + +  ++   ++   E S     PD+ T+ S+I G CK  KM++A G+Y +M   
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE 506

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+  + VT+N LI  F ++  +  A+ +   M   G   D +T++ LI   C+ G   + 
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           L L ++M G+ + P++ +  ILIN+ C+  ++NDA +FL+ +    L P    YN +I+G
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G   EA  +   ++ K   PD VT+  LI  +C +G   +A  +  K +  G  P+
Sbjct: 627 LCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPN 686

Query: 542 DITVNSLISCLLKGGMPNEAFRIM 565
           +IT + LI+  +K    +E F I+
Sbjct: 687 EITWSILINYFVKNNSDSEQFTIL 710



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 204/414 (49%), Gaps = 6/414 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +FK+YN+V+  L           VF  M S G  P        + +     + D+A  LL
Sbjct: 164 TFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLL 223

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                     ++ +Y  L++AL + N  +EA+ + +E F +  +PD  TFN +I GL + 
Sbjct: 224 RDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKA 283

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +A +    M     + D +    L+ GLCR+ +V     +L ++      +P+ V 
Sbjct: 284 GRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP-----NPNTVL 338

Query: 335 YTSVISGYCKLGKMDKATGI-YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           Y ++I+GY   G+ ++A  + Y  M   G +P A TFN++IDG  K G +VSA    + M
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G+ P+V+T++ LIDG+C+ G   +  K+ + M  K LS N   +  LI ALCK+ ++
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA +   ++      P  + +N +I G CK   ++EA  +  +M  +    + VT+  L
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           I        + +A  +  +M   GC  D+IT N LI  L K G   +   ++++
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQ 572



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 207/483 (42%), Gaps = 70/483 (14%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNP---KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGL 171
           ++L   L+P+   ++ K L+ P      +   E + +     HSF  Y L++  L  +G 
Sbjct: 50  KHLQRSLNPITPSQLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGE 109

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
              +  +   M+ +G +    +    +    +AG             PG+ T        
Sbjct: 110 FKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAG------------LPGQAT------RL 151

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           LL+           VY F+  F+        ++N++++ L      K A   FYDM S G
Sbjct: 152 LLDMW--------GVYCFEPTFK--------SYNVVLEILVAGNCPKVAPNVFYDMLSRG 195

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
            SP + T+  ++   C VNEV     LL+++  K    P+ + Y  +I    +  ++++A
Sbjct: 196 ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMT-KHGCVPNSIIYQMLIHALSENNRVNEA 254

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--SF-------GYL--- 399
             +  EM   G +P   TFN +I G  K G +  A  + +RML   F       GYL   
Sbjct: 255 MKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314

Query: 400 -------------------PDVVTFSSLIDGYCRNGQLNQGLKLC-DEMKGKNLSPNVYT 439
                              P+ V +++LI+GY  +G+  +   L    M      P+ +T
Sbjct: 315 LCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFT 374

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F I+I+ LCK+  L  A  FL ++      P    Y  +IDGFCK G+ +EA+ +V  M 
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K    + V +  LI   C  G++ +A+ ++ +M   GC PD  T NSLI  L K     
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494

Query: 560 EAF 562
           EA 
Sbjct: 495 EAL 497



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 150/313 (47%), Gaps = 17/313 (5%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           F ++++   + G   +A     DM    C  P   +YN ++  L   N       +  ++
Sbjct: 132 FILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDM 191

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                 SP V T+  V+  +C + ++D A  +  +M   G  P+++ + +LI    +   
Sbjct: 192 -LSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  + E M   G  PDV TF+ +I G C+ G++++  KL D M  ++ + +      
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA------NVIVA 496
           L++ LC+  ++++AR  L ++      P   +YN +I+G+  +G  +EA      N+++A
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             E     PD  TF I+I G C KG +V A+   ++M++ G  P+ IT   LI    K G
Sbjct: 367 GFE-----PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQG 421

Query: 557 MPNEAFRIMQRAS 569
              EA +++   S
Sbjct: 422 HFEEASKVVNSMS 434



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 1/200 (0%)

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            + +LID  G VG     + + ++M   G +     F  ++  Y + G   Q  +L  +M
Sbjct: 96  VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155

Query: 429 KGKN-LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
            G     P   ++ +++  L   N    A      +    + P  + +  V+  FC    
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNE 215

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           VD A  ++ +M +  C P+ + + +LI       R+ EA+ +  +M  +GC PD  T N 
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275

Query: 548 LISCLLKGGMPNEAFRIMQR 567
           +I  L K G  +EA ++  R
Sbjct: 276 VIHGLCKAGRIHEAAKLHDR 295


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 227/468 (48%), Gaps = 10/468 (2%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLK-FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
           ++L P   + +I +  N  L L+ FL   + +    H++ TY+ ++  L      D V+ 
Sbjct: 43  QRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVES 102

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           +   +R+    P     E      +R    AG+ +++  +  +     V  S    N+LL
Sbjct: 103 LMADLRNS--YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 160

Query: 234 NALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           N L++    D    MFK     +   P+ +T N+L++ L +  +++ A++   ++ + G 
Sbjct: 161 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGL 220

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P++VTY T++ G     ++     +L+E+     + PD +TYT ++ GYCKLG+  +A 
Sbjct: 221 VPNLVTYTTILGGYVARGDMESAKRVLEEM-LDRGWYPDAITYTVLMDGYCKLGRFSEAA 279

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            + ++M    I+P+ VT+ V+I    K      A  M + ML   ++PD      +ID  
Sbjct: 280 TVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDAL 339

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C + ++++   L  +M   N  P+    + LI+ LCKE R+++AR+   +      +P  
Sbjct: 340 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGS-IPSL 398

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +I G C+ G + EA  +  +M E++CKP+  T+ +LI G    G + E + +  +
Sbjct: 399 LTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 458

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWK 580
           ML  GC P+  T   L   L K G   +A +I+  A  +  +   SW+
Sbjct: 459 MLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKVDKESWE 506


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 225/454 (49%), Gaps = 19/454 (4%)

Query: 129 VIKRLDNPKLGLKFLEF-SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           V+ R+ + +LGLKF ++ SR   S   +   Y+ +++ L    +   ++VV + MR +  
Sbjct: 66  VLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEM 125

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMY-------NSLLNALVKQN 240
            P    +   + +   +G  + A  L          + T+ Y       NSLLN LVK  
Sbjct: 126 SPTREAMSIVIQAYSDSGLVEKALELYY------FVLKTYTYFPDVIACNSLLNMLVKLG 179

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFN----ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
             + A  ++ E   +    D    N    I+++GL + G++++  +   D    GC P+I
Sbjct: 180 RIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNI 239

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           + YNTLI G C+  ++   + L  E+K K  F P V TY ++I+G+CK G       +  
Sbjct: 240 IFYNTLIDGYCKKGDMEMANGLFIELKLKG-FLPTVETYGAIINGFCKKGDFKAIDRLLM 298

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EMNS G+  +   +N +ID   K G++V A    E M+  G  PD+VT+++LI G CR+G
Sbjct: 299 EMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDG 358

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++++  +L ++  GK L PN +++T LI+A CK+   + A  +L ++      P    Y 
Sbjct: 359 KVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYG 418

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G   AG VD A  I  +M E+   PD   + IL+ G C K ++  A  +  +ML  
Sbjct: 419 ALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ 478

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              PD     +L+   ++ G  +EA ++ +   E
Sbjct: 479 SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE 512



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 196/429 (45%), Gaps = 36/429 (8%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           ++++ LC+ G  +  + + +     G +PN       +    + G  + A GL  + +  
Sbjct: 209 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 268

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
               +   Y +++N   K+ +      +  E        +   +N +I    + G + KA
Sbjct: 269 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
            E    M   GC PDIVTYNTLISG CR  +V+   +LL++   K    P+  +YT +I 
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG-LMPNKFSYTPLIH 387

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY-- 398
            YCK G  D+A+    EM   G KP  VT+  L+ G    G +  A  +RE+ML  G   
Sbjct: 388 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 447

Query: 399 ---------------------------------LPDVVTFSSLIDGYCRNGQLNQGLKLC 425
                                            LPD   +++L+DG+ RNG L++  KL 
Sbjct: 448 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 507

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           +    K ++P +  +  +I   CK   + DA   + ++K   L P  F Y+ VIDG+ K 
Sbjct: 508 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQ 567

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
            ++D A  +  EM + +CKP+ VT+T LI G C KG +  ++ IF +M   G  P+ +T 
Sbjct: 568 HDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTY 627

Query: 546 NSLISCLLK 554
           + LI    K
Sbjct: 628 SILIGSFCK 636



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 204/488 (41%), Gaps = 67/488 (13%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQV---VFDYMRSDGHL----------------PNSPMIEF 196
           FK  + ++  +   GL  +VQV   + D     GH+                P+      
Sbjct: 290 FKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNT 349

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +S   R GK   A  LL Q     +  + F Y  L++A  KQ   D A     E     
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            +PD  T+  L+ GL   GEV  A      M   G  PD   YN L+SGLC+  ++    
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469

Query: 317 ELLKE----------------------------------VKFKSEFSPDVVTYTSVISGY 342
            LL E                                  +  +   +P +V Y ++I GY
Sbjct: 470 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 529

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           CK G M  A    N M    + P   T++ +IDG+ K  ++  A+ M   M+     P+V
Sbjct: 530 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VT++SLI+G+CR G L++ LK+  EM+   L PNV T++ILI + CKE +L DA  F ++
Sbjct: 590 VTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEE 649

Query: 463 LKWNDLVPKPFMYNPVIDGFCK--------AGNVDEANV------IVAEMEEKRCKPDKV 508
           +  N  VP    +N +++GF K         GN  + N           M      P   
Sbjct: 650 MLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSA 709

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            +  ++I  C  G    A+ + NKM   GC PD ++  +L+  +   G   E   I+   
Sbjct: 710 AYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCN 769

Query: 569 SEDQNLQL 576
             ++ LQ+
Sbjct: 770 LNERELQI 777



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 124/295 (42%), Gaps = 26/295 (8%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K  E + +   +N     YN +++  C+ G+        + M+     P+       +  
Sbjct: 505 KLFELT-IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDG 563

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            ++    D A+ +  +    +   +   Y SL+N   ++ +   ++ +F+E       P+
Sbjct: 564 YVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPN 623

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA---RGHE 317
             T++ILI    +  ++  A  FF +M    C P+ VT+N L++G  +    A   +G+E
Sbjct: 624 VVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNE 683

Query: 318 LL--KEVKFKSEF--------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
               K+  F + F        +P    Y S++   C+ G    A  + N+M S G  P +
Sbjct: 684 FQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDS 743

Query: 368 VTFNVLIDGFGKVG------NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           V+F  L+ G    G      N+VS   + ER L        V +SS++D Y   G
Sbjct: 744 VSFVALLHGVCLEGRSKEWKNIVSCN-LNERELQIA-----VNYSSILDQYLPQG 792


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 185/343 (53%), Gaps = 1/343 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +   +N ++ A+ +    D+A+ +F+E       PD +T++ L+ GL +   + +A    
Sbjct: 169 NALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLL 228

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G  P++V +N LIS LC+  ++ R  +L+  +  K    P+ VTY +++ G C 
Sbjct: 229 DEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKG-CVPNEVTYNALVHGLCL 287

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK++KA  + N+M S    P+ VTF  LI+GF   G       +   + + G+  +   
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +SSLI G C+ G+ NQ ++L  EM GK   PN   ++ LI+ LC+E +L++AR FL ++K
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
               +P  F Y+ ++ G+ +AG+  +A ++  EM    C  ++V ++ILI G C  G+ +
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           EA+ ++ +ML  G   D +  +S+I       +  +  ++  +
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQ 510



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 206/417 (49%), Gaps = 3/417 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           +L+++ +  T+NLV++++C +GL D    VF  +      P++      +    +  + D
Sbjct: 163 SLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERID 222

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL + +      +   +N L++AL K+ +   A  +    F     P+  T+N L+
Sbjct: 223 EAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALV 282

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL   G+++KA      M S  C P+ VT+ TLI+G       + G  +L  ++ +   
Sbjct: 283 HGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHR 342

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             + V Y+S+ISG CK GK ++A  ++ EM   G  P+ + ++ LIDG  + G +  A  
Sbjct: 343 GNEYV-YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARG 401

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
               M + GYLP+  T+SSL+ GY   G  ++ + +  EM   N   N   ++ILIN LC
Sbjct: 402 FLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLC 461

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPD 506
           K+ +  +A    KQ+    +      Y+ +I GFC A  V++   +  +M  +    +PD
Sbjct: 462 KDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPD 521

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            +T+ IL+   C++  +  AI I N ML  GC PD IT +  +  L +   P +  R
Sbjct: 522 VITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGR 578



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 177/344 (51%), Gaps = 5/344 (1%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTW-TFNILIQGLSRIGEVKKAFEFFYDM--- 287
           +  A  K +  ++AV +F   +  +    T  +FN ++  + + G   +A EF+  +   
Sbjct: 102 MFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVAS 161

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            S    P+ +T+N +I  +CR+  V +  E+ +E+  ++  +PD  TY++++ G CK  +
Sbjct: 162 KSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRN-CAPDNYTYSTLMHGLCKEER 220

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D+A  + +EM   G  P+ V FNVLI    K G++  A  + + M   G +P+ VT+++
Sbjct: 221 IDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNA 280

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+ G C  G+L + + L ++M      PN  TF  LIN    + R +D  R L  L+   
Sbjct: 281 LVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARG 340

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
                ++Y+ +I G CK G  ++A  +  EM  K C P+ + ++ LI G C +G++ EA 
Sbjct: 341 HRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEAR 400

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
              ++M   G  P+  T +SL+    + G  ++A  + +  + +
Sbjct: 401 GFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANN 444



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 171/392 (43%), Gaps = 59/392 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +N+++ +LC+ G       + D M   G +PN       V      GK + A  LL+Q 
Sbjct: 242 AFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM 301

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   + +L+N  V Q  A +   +         + + + ++ LI GL + G+ 
Sbjct: 302 VSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKF 361

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E + +M   GC P+ + Y+ LI GLCR  ++      L E+K K  + P+  TY+S
Sbjct: 362 NQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKG-YLPNSFTYSS 420

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY + G   KA  ++ EM +     + V +++LI+G  K G  + A  + ++MLS G
Sbjct: 421 LMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRG 480

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALCKENRL-- 453
              DVV +SS+I G+C    + QGLKL ++M  +G  + P+V T+ IL+NA C +  +  
Sbjct: 481 IKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFR 540

Query: 454 ----------------------------------NDARRFLKQL---------------- 463
                                              D R FL +L                
Sbjct: 541 AIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKI 600

Query: 464 ----KWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                   L+PK   +  V+   CK  NV +A
Sbjct: 601 IEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 195/399 (48%), Gaps = 2/399 (0%)

Query: 158 TYNLVMRSLCEMGLH-DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN V+  L   G   D+   +FD M   G  P+       +S+  +A   D A  +L +
Sbjct: 204 SYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVR 263

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   +NSLL+        ++A+ +FK   R   +PD +T+N L+  L + G 
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A + F  M   G  P+  TY TL+ G      + + H LL ++  ++   PD   + 
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLL-DMMVRNGIQPDHYIFN 382

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I  Y K GK+D A  ++++M   G+ P  VT+ +++D    VG +  A     R++S 
Sbjct: 383 ILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE 442

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD V F +LI G C   + ++  +L  EM G+ + PN   F  L+N LCKE  +  A
Sbjct: 443 GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARA 502

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +     +   D+      YN +IDG+C  G VDEA  ++  M     KP++VT+  +I G
Sbjct: 503 KNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMING 562

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           +C  GR+ +A S+F +M   G  P  +T ++++  L + 
Sbjct: 563 YCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA 601



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 199/443 (44%), Gaps = 44/443 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +L +    D   VV   M  +G +PN       +     +GK + A G+  + 
Sbjct: 240 TYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRM 299

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-------------LYS------- 257
               V    F YN+L+  L K   + EA  +F    +             L+        
Sbjct: 300 CRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSL 359

Query: 258 ---------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                          QPD + FNILI   ++ G+V  A   F  M   G +PD VTY  +
Sbjct: 360 VKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIV 419

Query: 303 ISGLCRVNEV----ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           +  LC V +V    A+   L+ E       +PD V + ++I G C   K DKA  +  EM
Sbjct: 420 MDALCMVGKVDDAMAQFGRLISE-----GLTPDAVVFRNLIHGLCARDKWDKAEELAVEM 474

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              GI P+ + FN L++   K G +  A+ + + M+      DV+T+++LIDGYC +G++
Sbjct: 475 IGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKV 534

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++  KL + M    + PN  T+  +IN  CK  R+ DA    +Q+    + P    Y+ +
Sbjct: 535 DEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTI 594

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           + G  +A     A  +   M +   K D  T+ I+++G C      +A+ IF  +  I  
Sbjct: 595 LQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDF 654

Query: 539 APDDITVNSLISCLLKGGMPNEA 561
             ++ T N +I  LLKGG  +EA
Sbjct: 655 HLENRTFNIMIDALLKGGRHDEA 677



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 178/361 (49%), Gaps = 10/361 (2%)

Query: 223 TMSTFMYNSLLNALVKQNNADEAVY-----MFKEYFRLYSQPDTWTFNILIQGLSRIG-E 276
           T + F Y  LL  L  +N + +A++     M  +  R    PD  ++N +I GL R G +
Sbjct: 159 TPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQ 218

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A+  F  M   G SPD+VTYN++IS L +   + +   +L  +  K+   P+ +T+ 
Sbjct: 219 LDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRM-VKNGAMPNRITHN 277

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++ GYC  GK + A G++  M   G++P   T+N L+    K G  + A  + + M+  
Sbjct: 278 SLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+ P+  T+ +L+ GY   G L +   L D M    + P+ Y F ILI    K  +++DA
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                +++   L P    Y  V+D  C  G VD+A      +  +   PD V F  LI G
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
            C + +  +A  +  +M+  G  P++I  N+L++ L K GM   A   F +M R    ++
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517

Query: 574 L 574
           +
Sbjct: 518 V 518



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 196/423 (46%), Gaps = 8/423 (1%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSD----GHLPNSPMIEFFVSSCIRAGK-CDAAK 211
           +Y ++++ LC E     ++ ++   M +D    G+ P+       ++  +R G+  D A 
Sbjct: 164 SYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAY 223

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  Q     ++     YNS+++AL K    D+A  +     +  + P+  T N L+ G 
Sbjct: 224 HLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGY 283

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              G+   A   F  M   G  PD+ TYNTL+  LC+        ++   +  K    P+
Sbjct: 284 CSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSM-VKRGHKPN 342

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
             TY +++ GY   G + K   + + M   GI+P    FN+LI  + K G +  A  +  
Sbjct: 343 SATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFS 402

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M   G  PD VT+  ++D  C  G+++  +     +  + L+P+   F  LI+ LC  +
Sbjct: 403 KMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARD 462

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           + + A     ++    + P    +N +++  CK G V  A  I   M     + D +T+ 
Sbjct: 463 KWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYN 522

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM-QRASE 570
            LI G+C+ G++ EA  +   M+  G  P+++T N++I+   K G   +AF +  Q AS+
Sbjct: 523 TLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASK 582

Query: 571 DQN 573
             N
Sbjct: 583 GVN 585



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 204/449 (45%), Gaps = 36/449 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M  LC+ G     + +FD M   GH PNS      +      G       LL   
Sbjct: 310 TYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM 369

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    +++N L+    K    D+A+ +F +  R    PDT T+ I++  L  +G+V
Sbjct: 370 VRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKV 429

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  + S G +PD V +  LI GLC  ++  +  EL  E+  +    P+ + + +
Sbjct: 430 DDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRG-ICPNNIFFNT 488

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++  CK G + +A  I++ M    ++   +T+N LIDG+   G +  A  + E M+  G
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT---------------- 441
             P+ VT++++I+GYC+NG++     L  +M  K ++P + T++                
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608

Query: 442 -------------------ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                              I++  LC+ N  +DA R  + L   D   +   +N +ID  
Sbjct: 609 ELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDAL 668

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G  DEA  + A +  +   P+ VT+ +++     +G + E   +F  + + GC  + 
Sbjct: 669 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANS 728

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +N+L+  LL+ G   +A   + +  E+
Sbjct: 729 RMLNALVGKLLQKGEVRKAGVYLSKIDEN 757



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 166/370 (44%), Gaps = 76/370 (20%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNE---- 311
           P+  T++++I   SR+G +  AF     +   G + + +T++ L+  LC   R +E    
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 312 -------------------VARG--------------HELLKEVKFKSEFSPDVVTYTSV 338
                              + +G              H ++     +  + PDVV+Y +V
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 339 ISGYCKLGK-MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           I+G  + G+ +D A  ++++M   G+ P  VT+N +I    K   M  A  +  RM+  G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+ +T +SL+ GYC +G+ N  + +   M    + P+V+T+  L+  LCK  R  +AR
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 458 R-----------------------------------FLKQLKWNDLVPKPFMYNPVIDGF 482
           +                                    L  +  N + P  +++N +I  +
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G VD+A ++ ++M  +   PD VT+ I++   CM G++ +A++ F +++  G  PD 
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448

Query: 543 ITVNSLISCL 552
           +   +LI  L
Sbjct: 449 VVFRNLIHGL 458



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 167/364 (45%), Gaps = 1/364 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           LN    TY +VM +LC +G  D     F  + S+G  P++ +    +       K D A+
Sbjct: 409 LNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAE 468

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  +     +  +   +N+LLN L K+     A  +F    R+  Q D  T+N LI G 
Sbjct: 469 ELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGY 528

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              G+V +A +    M   G  P+ VTYNT+I+G C+   +     L +++  K   +P 
Sbjct: 529 CLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG-VNPG 587

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +VTY++++ G  +  +   A  +Y  M   GIK    T+N+++ G  +      A  + +
Sbjct: 588 IVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQ 647

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            +    +  +  TF+ +ID   + G+ ++   L   +  + L PNV T+ +++ +L ++ 
Sbjct: 648 NLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L +       L+ N       M N ++    + G V +A V +++++E     +  T  
Sbjct: 708 LLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAE 767

Query: 512 ILII 515
            L++
Sbjct: 768 SLVL 771



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 42/244 (17%)

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P+ +T++V+ID   +VG++  A     R++  G+  + +TFS L+   C   + ++ +
Sbjct: 87  VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146

Query: 423 KLC-DEMKGKNLSPNVYTFTILINALCKENR----------------------------- 452
            +    M     +PNV+++TIL+  LC ENR                             
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYN 206

Query: 453 ------------LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
                       L+ A     Q+    L P    YN +I    KA  +D+A V++  M +
Sbjct: 207 TVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVK 266

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
               P+++T   L+ G+C  G+  +AI +F +M R G  PD  T N+L+  L K G   E
Sbjct: 267 NGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSME 326

Query: 561 AFRI 564
           A +I
Sbjct: 327 ARKI 330



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/239 (18%), Positives = 92/239 (38%), Gaps = 1/239 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V + +     TYN ++   C  G  D    + + M  DG  PN       ++   + G+ 
Sbjct: 510 VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRI 569

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  L  Q     V      Y+++L  L +      A  ++    +   + D  T+NI+
Sbjct: 570 EDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNII 629

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL +      A   F ++       +  T+N +I  L +        +L   +  +  
Sbjct: 630 LLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARG- 688

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             P+VVTY  ++    + G +++   ++  +   G   ++   N L+    + G +  A
Sbjct: 689 LVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKA 747


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 216/458 (47%), Gaps = 43/458 (9%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  +YN +M  L E G  +    V+  M+ +G  P+       + S  R  +  AA  LL
Sbjct: 110 SIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLL 169

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL------------------- 255
           +        ++  +Y ++++   ++N   EA  +F +  RL                   
Sbjct: 170 NNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKK 229

Query: 256 -YSQ---------------PDTWTFNILIQGLSRIG-------EVKKAFEFFYDMGSFGC 292
            + Q               P+ +TFNI IQGL R G       +V +A  + + M + G 
Sbjct: 230 GHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGL 289

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PD  TYNT+I G  +V ++     +LK+ KFK  F PD  TY S+I G C+ G +D A 
Sbjct: 290 EPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKG-FVPDEFTYCSLIIGVCQDGDIDHAL 348

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ E    G+KPS V +N LI G  + G ++ A  +   M   G  PD+ T++ +I+G 
Sbjct: 349 ALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGL 408

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G ++    L +    K   P+++TF  LI+  CK  ++++A   L  +  + + P  
Sbjct: 409 CKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDV 468

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +++G CKA   ++       + EK C P+ +T+ ILI   C   ++ EA+ +  +
Sbjct: 469 ITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEE 528

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +   G  PD ++  ++IS     G  +EA+++ +R  +
Sbjct: 529 IRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQ 566



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 206/417 (49%), Gaps = 9/417 (2%)

Query: 158 TYNLVMRSLCEMGLHDSV--QVV-----FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           T+N+ ++ LC  G+ +    +VV        M + G  P+       +    + GK   A
Sbjct: 253 TFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDA 312

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +L   +        F Y SL+  + +  + D A+ +F+E      +P    +N LI+G
Sbjct: 313 SRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKG 372

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           LS+ G V KA +   DM   G SPDI TYN +I+GLC++  V+  + LL     K  + P
Sbjct: 373 LSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKG-YLP 431

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+ T+ ++I GYCK  KMD A GI + M S G+ P  +T+N +++G  K           
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + ++  G LP+++T++ LI+  C+  ++ + L L +E++ + L P+  +F  +I+  C  
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNN 551

Query: 451 NRLNDARRFLKQLKWNDLVPKPF-MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             L++A +  ++++    +      YN +I+ F +  ++D A  +  EM +K C PD  T
Sbjct: 552 GDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYT 611

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           + ++I G C  G +        K + IG  P   T   +I+CL      +EA  I+ 
Sbjct: 612 YRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVH 668



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 202/421 (47%), Gaps = 9/421 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG-------KCDAA 210
           T+N +M  LC+ G     + + + +  +G  PN      F+    R G       K   A
Sbjct: 218 TFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEA 277

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           +  L +     +    F YN+++    K     +A  + K+       PD +T+  LI G
Sbjct: 278 ENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIG 337

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           + + G++  A   F +    G  P IV YNTLI GL +   V +  +L+ ++  K   SP
Sbjct: 338 VCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMS-KEGMSP 396

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+ TY  VI+G CK+G +  A  + N   + G  P   TFN LIDG+ K   M +A  + 
Sbjct: 397 DIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGIL 456

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + M S G  PDV+T++S+++G C+  +    ++    +  K   PN+ T+ ILI +LCK 
Sbjct: 457 DSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKA 516

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK-RCKPDKVT 509
            ++ +A   L++++   L+P P  +  VI GFC  G++DEA  +   ME++ R      T
Sbjct: 517 RKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVAT 576

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           + I+I     K  M  A  +F++M   GC PD  T   +I    K G  N  +  + +  
Sbjct: 577 YNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEI 636

Query: 570 E 570
           E
Sbjct: 637 E 637



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 223/498 (44%), Gaps = 54/498 (10%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           L P +   V+K   +P   L      +      H+F TY  ++  L   G  D+++ V  
Sbjct: 5   LLPKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLM 64

Query: 181 YMRSDGHLPNSPMIEFFVSSCI---RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            MR +  + NS +   +VS+     R GK   A  +  +        S F YN+++N LV
Sbjct: 65  EMRLN--VDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILV 122

Query: 238 KQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSR----IGEVK------------ 278
           +    ++A    K Y R+  +   PD  TF I I+   R    +  ++            
Sbjct: 123 EYGYFNQA---HKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL 179

Query: 279 -------------------KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
                              +A+E F  M   G  P I T+N L+  LC+   +  G +LL
Sbjct: 180 NAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLL 239

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLG-------KMDKATGIYNEMNSCGIKPSAVTFNV 372
            +V  K+   P++ T+   I G C+ G       K+ +A    ++M + G++P   T+N 
Sbjct: 240 NKV-LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNT 298

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           +I G+ KVG +  A  + +     G++PD  T+ SLI G C++G ++  L L +E  GK 
Sbjct: 299 IIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKG 358

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L P++  +  LI  L ++  +  A + +  +    + P  + YN VI+G CK G V +AN
Sbjct: 359 LKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDAN 418

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++     K   PD  TF  LI G+C + +M  AI I + M   G  PD IT NS+++ L
Sbjct: 419 NLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGL 478

Query: 553 LKGGMPNEAFRIMQRASE 570
            K   P +     +   E
Sbjct: 479 CKAAKPEDVMETFKMIME 496



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 199/399 (49%), Gaps = 4/399 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           VN  L     TYN ++    ++G + D+ +++ D  +  G +P+       +    + G 
Sbjct: 285 VNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD-AKFKGFVPDEFTYCSLIIGVCQDGD 343

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            D A  L  +     +  S  +YN+L+  L +Q    +A+ +  +  +    PD WT+N+
Sbjct: 344 IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNL 403

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I GL ++G V  A        + G  PDI T+NTLI G C+  ++     +L  + +  
Sbjct: 404 VINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSM-WSH 462

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             +PDV+TY S+++G CK  K +     +  +   G  P+ +T+N+LI+   K   +  A
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEA 522

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILIN 445
             + E + + G +PD V+F ++I G+C NG L++  +L   M+ +  +   V T+ I+IN
Sbjct: 523 LDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMIN 582

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           A  ++  ++ A++   ++      P  + Y  +IDGFCK GNV+     + +  E    P
Sbjct: 583 AFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVP 642

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
              TF  +I   C++ R+ EA+ I + M+R G  P+ + 
Sbjct: 643 SLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 218/473 (46%), Gaps = 57/473 (12%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-- 217
           N V+   C+ GL +  + + + MR  G  PN       +S+  +AG+   A  +      
Sbjct: 211 NTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQE 270

Query: 218 -------RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK-----EYFRLYSQPDTWTFN 265
                  RP +VT     ++ +L+        DEA  +        + R     + W   
Sbjct: 271 DWQHGLPRPDQVT-----FDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRW--- 322

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
             + GL R G V +A E   +M   G  P+  TYN ++SGLC+  +      +   ++  
Sbjct: 323 --LSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIR-S 379

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              SPDVVTYTS++  YC  G +  A  I +EM   G  P++ T+NVL+    + G    
Sbjct: 380 GVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTE 439

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK---------------- 429
           AE + ERM   GY  D    + +IDG CRN +L+  + + D M                 
Sbjct: 440 AERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLS 499

Query: 430 -------GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                   +   P+  T++ILI+ALCKE R ++A++ L ++   D+ P   +Y+  I G+
Sbjct: 500 VVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGY 559

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G    A  ++ +ME+K C P   T+ +LI G   K +  E + + ++M   G +P+ 
Sbjct: 560 CKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNV 619

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNTDIPVAA 595
           +T NSLI    + GM N+A  ++     D+ LQ     + VP  T+ D+ + A
Sbjct: 620 MTYNSLIKSFCQQGMVNKAMPLL-----DEMLQ----NELVPNITSFDLLIKA 663



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 184/378 (48%), Gaps = 32/378 (8%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T +YN L+ A ++++  D    ++K+     +QPD +T N+L+Q L   G ++ A   F
Sbjct: 109 TTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVF 168

Query: 285 YDMG-----SFGC----------------------SPDIVTYNTLISGLCRVNEVARGHE 317
             M      SFG                       S ++V  NT+++G C+   V     
Sbjct: 169 DAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAER 228

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN---SCGI-KPSAVTFNVL 373
           L++ ++ +   +P+VVT+ + IS  CK G++  A  I+ +M      G+ +P  VTF+V+
Sbjct: 229 LVERMRVQG-LAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVM 287

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           + GF   G +  A  + + M   G+L  V +++  + G  RNG++ +  +L  EM  + +
Sbjct: 288 LSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGI 347

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            PN YT+ I+++ LCKE +  DARR    ++   + P    Y  ++  +C  GN+  AN 
Sbjct: 348 QPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANR 407

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           I+ EM +K C P+  T+ +L+      GR  EA  +  +M   G + D    N +I  L 
Sbjct: 408 ILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLC 467

Query: 554 KGGMPNEAFRIMQRASED 571
           +    + A  I+    E+
Sbjct: 468 RNSRLDVAMDIVDGMWEE 485



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 191/436 (43%), Gaps = 25/436 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++   C+ G  D  +V+ D MR  G L        ++S  +R G+   A+ LL + 
Sbjct: 283 TFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREM 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +++ YN +++ L K+  A +A  +          PD  T+  L+      G +
Sbjct: 343 AHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNI 402

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M   GC+P+  TYN L+  L R         LL+ +  K  +S D      
Sbjct: 403 AAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG-YSLDTAGCNI 461

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIK-----------------------PSAVTFNVLI 374
           +I G C+  ++D A  I + M   G                         P  +T+++LI
Sbjct: 462 IIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILI 521

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
               K G    A+     M+     PD V + + I GYC++G+ +  +K+  +M+ K  +
Sbjct: 522 SALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCN 581

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+  T+ +LI    ++++  +  + + ++K   + P    YN +I  FC+ G V++A  +
Sbjct: 582 PSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPL 641

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           + EM +    P+  +F +LI  +C       A  +F+  LR  C   ++    + + L  
Sbjct: 642 LDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRT-CGQKEVLYCLMCTELTT 700

Query: 555 GGMPNEAFRIMQRASE 570
            G   EA  I++ A E
Sbjct: 701 YGKWIEAKNILEMALE 716



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 190/432 (43%), Gaps = 23/432 (5%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++YN  +  L   G     Q +   M  +G  PNS      VS   + GK   A+ + + 
Sbjct: 317 ESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENF 376

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G ++     Y SLL+A   + N   A  +  E  +    P+++T+N+L+Q L R G 
Sbjct: 377 IRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGR 436

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-------------K 323
             +A      M   G S D    N +I GLCR + +    +++  +              
Sbjct: 437 TTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNS 496

Query: 324 FKSEFS---------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
           F S  S         PD +TY+ +IS  CK G+ D+A     EM    I P +V ++  I
Sbjct: 497 FLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFI 556

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G+ K G    A  +   M   G  P   T++ LI G+    +  + +KL  EMK K +S
Sbjct: 557 HGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGIS 616

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PNV T+  LI + C++  +N A   L ++  N+LVP    ++ +I  +CK  +   A  +
Sbjct: 617 PNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQ-M 675

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           V +   + C   +V + ++       G+ +EA +I    L +  +        +IS L +
Sbjct: 676 VFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCE 735

Query: 555 GGMPNEAFRIMQ 566
            G  + A  +++
Sbjct: 736 VGEVDHAHSLLK 747



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 183/447 (40%), Gaps = 58/447 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G     + V +++RS    P+       + +    G   AA  +L + 
Sbjct: 353 TYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEM 412

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ++F YN LL +L +     EA  + +         DT   NI+I GL R   +
Sbjct: 413 AQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRL 472

Query: 278 KKAFEFFYDM-----GSFG------------------CSPDIVTYNTLISGLCRVNEVAR 314
             A +    M     G+ G                  C PD +TY+ LIS LC+      
Sbjct: 473 DVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDE 532

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             + L E+  K + SPD V Y + I GYCK GK   A  +  +M   G  PS  T+N+LI
Sbjct: 533 AKKKLLEMIVK-DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLI 591

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            GF +         +   M   G  P+V+T++SLI  +C+ G +N+ + L DEM    L 
Sbjct: 592 RGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELV 651

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQL----------------------KWND----- 467
           PN+ +F +LI A CK      A+                            KW +     
Sbjct: 652 PNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNIL 711

Query: 468 -------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
                  +  + F Y  +I G C+ G VD A+ ++  +  KR   D   F  +I     +
Sbjct: 712 EMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDR 771

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNS 547
           G+  +   +  KM+ +    D +  +S
Sbjct: 772 GKKQDVDMLSAKMMEMADRNDGLGTDS 798



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 160/358 (44%), Gaps = 32/358 (8%)

Query: 245 AVYMFKEYFRLYSQP--DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           A+  F+    L S P   T  +N LI    R   +      + D+   G  PD+ T N L
Sbjct: 92  AIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLL 151

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEF--------------------------SPDVVTYT 336
           +  LC    +     +   +  ++EF                          S ++V   
Sbjct: 152 LQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCN 211

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA----EYMRER 392
           +V++G+CK G +++A  +   M   G+ P+ VTFN  I    K G ++ A    + M+E 
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED 271

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
                  PD VTF  ++ G+C  G +++   L D M+       V ++   ++ L +  R
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           + +A+  L+++    + P  + YN ++ G CK G   +A  +   +      PD VT+T 
Sbjct: 332 VGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           L+  +C KG +  A  I ++M + GCAP+  T N L+  L + G   EA R+++R +E
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNE 449



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 8/186 (4%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           R L+    P    ++ LI    R  +L+    L  ++      P+V+T  +L+ ALC   
Sbjct: 100 RALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAG 159

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+  A+R    +   +     F +  +  G+C+AG   +A  ++  M       + V   
Sbjct: 160 RMELAQRVFDAMPARN----EFSFGILARGYCRAGRSIDALKVLDGMPSM----NLVVCN 211

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            ++ G C +G + EA  +  +M   G AP+ +T N+ IS L K G   +A+RI Q   ED
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED 271

Query: 572 QNLQLP 577
               LP
Sbjct: 272 WQHGLP 277



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 78/198 (39%), Gaps = 8/198 (4%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N S +TYNL++R   E    + +  +   M+  G  PN       + S  + G  + A  
Sbjct: 581 NPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMP 640

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL +    E+  +   ++ L+ A  K  +   A  +F    R   Q +   + ++   L+
Sbjct: 641 LLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVL-YCLMCTELT 699

Query: 273 RIG---EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
             G   E K   E   +M     S     Y  +ISGLC V EV   H LLK +  K    
Sbjct: 700 TYGKWIEAKNILEMALEM---RVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLF 756

Query: 330 PDVVTYTSVISGYCKLGK 347
            D   +  VI      GK
Sbjct: 757 -DPAAFMPVIDALGDRGK 773


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 207/413 (50%), Gaps = 11/413 (2%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP----MIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++R L + GL D     F   RS   +P +P    +    + S +R  K D+   L    
Sbjct: 85  LIRILAKSGLSDLAFSQFQSFRS--QVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDM 142

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+  T+  N L+  L      ++A  +F +      +P+ ++F IL++G  R G  
Sbjct: 143 VVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLS 202

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E    MGSFG  P+ V YNTLIS  CR         L++ ++    F PDVVT+ S
Sbjct: 203 MRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLF-PDVVTFNS 261

Query: 338 VISGYCKLGKMDKATGIYNEMN---SCGI-KPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            IS  C  GK+ +A+ I+ +M      G+ +P+  TFN++++GF K G +  A+ + E M
Sbjct: 262 RISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESM 321

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G L ++ +++  + G  RNG+L +      EM  K + PN+Y+F  +++ LCK   +
Sbjct: 322 KRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLI 381

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +DAR  +  +  + + P    Y+ ++ G C  G V +AN I+ EM  + C P+  T  IL
Sbjct: 382 SDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNIL 441

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +     +GR+ EA  +  KM       D++T N +I  L K G  +EA  I++
Sbjct: 442 LHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVE 494



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 183/349 (52%), Gaps = 5/349 (1%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            ++YN +L + ++++  D   +++K+       P+T+T N+LI GL   G  + A E F 
Sbjct: 116 VYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFD 175

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            MG  GC P+  ++  L+ G CR     R  ELL  +       P+ V Y ++IS +C+ 
Sbjct: 176 KMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMG-SFGVQPNKVIYNTLISSFCRE 234

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL----PD 401
           G+ ++A  +   M   G+ P  VTFN  I      G ++ A  +   M     L    P+
Sbjct: 235 GRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPN 294

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           + TF+ +++G+C+ G L +   L + MK       + ++ I +  L +  +L +A+  LK
Sbjct: 295 ITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALK 354

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++    + P  + +N V+DG CK G + +A +I+  M      PD VT++ L+ G C  G
Sbjct: 355 EMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTG 414

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++++A +I ++M+R GC+P+  T N L+  L K G   EA +++Q+ +E
Sbjct: 415 KVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNE 463



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 194/449 (43%), Gaps = 61/449 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N VM  LC+ GL    +++   M S G  P++      +  C   GK   A  +L + 
Sbjct: 367 SFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEM 426

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +T+  N LL++L K+    EA  + ++        D  T NI+I GL + G++
Sbjct: 427 MRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKL 486

Query: 278 KKAFEFFYDM--------GSFG---------------CSPDIVTYNTLISGLCRVNEVAR 314
            +A E    M        G+ G               C PD++TY+ +I+GLC+   +  
Sbjct: 487 DEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDE 546

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             +   E+  KS   PD + Y + I  +CK GK+  A  +  +M   G   S  T+N LI
Sbjct: 547 ARKKFIEMVGKS-LHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLI 605

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G G    +     + + M   G  P++ T++++I   C  G++     L DEM  K +S
Sbjct: 606 LGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGIS 665

Query: 435 PNVYTFTILINALCKENRLNDARRF-------------LKQLKWNDLVPKP--------- 472
           PN+ +F +LI A CK +     +               L  L +N+L+            
Sbjct: 666 PNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELF 725

Query: 473 ------------FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
                       F YN +I+  CK   ++ A+ I+ +M +K  + D  +F  +I G   +
Sbjct: 726 DAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKR 785

Query: 521 GRMVEAISIFNKMLRI---GCAPDDITVN 546
           G+  +A  +  +M+ +   G   + IT N
Sbjct: 786 GKKHDADELAERMMDMASEGMVENKITRN 814



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P V  ++ +++   R  +++    L  +M    +SP  YT  +LI  LC   R  DAR  
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++      P  F +  ++ G+C+AG    A  ++  M     +P+KV +  LI   C 
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           +GR  EA  +  +M   G  PD +T NS IS L   G   EA RI +    D+ L LP
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLP 291


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 201/407 (49%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  ++    F  M+ +G + N      FV +  + G    A  L +Q 
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   + ++ F Y  L++   K    D+A+ +  E  R     +  T+ +L+ GL +  +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +    M   G   + + Y TLI G        +   LL E+K K     D+  Y +
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG-LELDISLYGA 438

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C + K+D+A  +  +M+  G++P+ + +  ++D   K G +  A  M +++L  G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P+V+T+ +LIDG C+ G +++ +   ++M+   L PNV  +T L++ LCK   LN+A 
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    +     +Y  ++DG+ K GN+ +A  + A+M +   + D   +T  I G 
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C    M EA  +F++M+  G APD    N LIS   K G   EA  +
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 209/423 (49%), Gaps = 43/423 (10%)

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           + +++  +S     G  D A   +++ R   V  +T   N +L  L +    D +  + +
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVR 177

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
             F     P+ +TFNI+I  L + GE+ +A   F  M   GC PD+VT+N+LI G  +  
Sbjct: 178 RLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           E+    +L++E++ +S    DVVTY ++I+ +CK G+M+ A G +  M   G+  + VTF
Sbjct: 238 ELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF 296

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           +  +D F K G +  A  +  +M   G   +  T++ LIDG C+ G+L+  + L DEM  
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLK----------QLKWNDLVPKPFM------ 474
           + +  NV T+T+L++ LCKE ++ +A   L+          +L +  L+   FM      
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416

Query: 475 -------------------YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
                              Y  +I G C    +DEA  ++ +M+E   +P+ + +T ++ 
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQ 572
                G++ EAI++  K+L  G  P+ IT  +LI  L K G  +EA   F  M+    D 
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP 536

Query: 573 NLQ 575
           N+Q
Sbjct: 537 NVQ 539



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 185/376 (49%), Gaps = 1/376 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       +    + G+   A+ L S+ +          +NSL++   K    DE   +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            +E  R   + D  T+N LI    + G ++ A+ +F  M   G   ++VT++T +   C+
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              V    +L  +++ +   + +  TYT +I G CK G++D A  + +EM   G+  + V
Sbjct: 306 EGLVREAMKLFAQMRVRG-MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+ VL+DG  K   +  AE +   M   G   + + +++LI G+  N    + L L  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           K K L  ++  +  LI  LC  ++L++A+  L ++  + L P   +Y  ++D   K+G V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  ++ ++ +   +P+ +T+  LI G C  G + EAIS FNKM  +G  P+     +L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 549 ISCLLKGGMPNEAFRI 564
           +  L K G  NEA ++
Sbjct: 545 VDGLCKNGCLNEAVQL 560



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 193/419 (46%), Gaps = 2/419 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+V+  LC+ G     + +F  M+  G LP+       +    + G+ D  + L+ + 
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN+L+N   K    + A   F    R     +  TF+  +    + G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F  M   G + +  TY  LI G C+   +     LL E+  +     +VVTYT 
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM-VRQGVPLNVVTYTV 368

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK  K+ +A  +   M   G++ + + +  LI G     N   A  +   M + G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+  + +LI G C   +L++   L  +M    L PN   +T +++A  K  ++ +A 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++  +   P    Y  +IDG CKAG++DEA     +M +    P+   +T L+ G 
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           C  G + EA+ +FN+M+  G + D +   +L+   LK G  ++AF +  +   D  LQL
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI-DSGLQL 606



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 1/342 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G  D   V+ D M   G   N       V    +  K   A+ +L   
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  +Y +L++      N+++A+ +  E      + D   +  LIQGL  + ++
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G  P+ + Y T++    +  +V     +L+++   S F P+V+TY +
Sbjct: 450 DEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI-LDSGFQPNVITYCA 508

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G +D+A   +N+M   G+ P+   +  L+DG  K G +  A  +   M+  G
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D V +++L+DGY + G L+    L  +M    L  +++ +T  I+  C  N + +AR
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 628

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
               ++  + + P   +YN +I  + K GN++EA  +  EME
Sbjct: 629 EVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 13/268 (4%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L      Y  +++ LC +   D  + +   M   G  PN  +    + +C ++GK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 209 AAKGLL-----SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            A  +L     S F+P  +T     Y +L++ L K  + DEA+  F +   L   P+   
Sbjct: 486 EAIAMLQKILDSGFQPNVIT-----YCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  L+ GL + G + +A + F +M   G S D V Y  L+ G  +   +      LK   
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA-LKAKM 599

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S    D+  YT  ISG+C L  M +A  +++EM   GI P    +N LI  + K+GN+
Sbjct: 600 IDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNL 659

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             A  +++ M     LP      +  DG
Sbjct: 660 EEAISLQDEMERV--LPSCTDSDTATDG 685


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 221/450 (49%), Gaps = 5/450 (1%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLE-FSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           ++P    EV++ L N K+  K +  F ++       + + YN ++  L   G +  V  +
Sbjct: 157 VTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHEL 216

Query: 179 FDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           ++ M ++GH  P++      +S+  + G+ D+A  LL++ +   +  +T +Y  L+    
Sbjct: 217 YNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFF 276

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K ++   A+ +F+E    Y +PD +T+  LI+GL + G + +A+ FFY+M   GC PD V
Sbjct: 277 KLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTV 336

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG-YCKLGKMDKATGIYN 356
             N +I+ L +   +    +L +E+       P VVTY ++I   +    +  +    + 
Sbjct: 337 VMNNMINFLGKAGRLDDAMKLFQEMG-TLRCIPSVVTYNTIIKALFESKSRASEVPSWFE 395

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M   GI PS+ T+++LIDGF K   M  A  + E M   G+ P    + SLID   +  
Sbjct: 396 RMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 455

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           + +   +L  E+K    S +   + ++I  L K  RL+DA     ++      P  + YN
Sbjct: 456 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYN 515

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G  + G +DEA   +  M+E  C PD  ++ I++ G    G    A+ + + M + 
Sbjct: 516 ALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 575

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              PD ++ N+++  L   GM  EA ++M+
Sbjct: 576 TVRPDVVSYNTVLGALSHAGMFEEAAKLME 605



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 10/402 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ + C++G  DS   + + M+ +G  P + +    ++   +      A  L  + 
Sbjct: 232 TYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R        F Y  L+  L K    DEA + F E  R   +PDT   N +I  L + G +
Sbjct: 292 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRL 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGL----CRVNEVARGHELLKEVKFKSEFSPDVV 333
             A + F +MG+  C P +VTYNT+I  L     R +EV    E +KE    S  SP   
Sbjct: 352 DDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE----SGISPSSF 407

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-VSAEYMRER 392
           TY+ +I G+CK  +M+KA  +  EM+  G  P    +  LID  GK     ++ E  +E 
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
             + G     V ++ +I    + G+L+  + + DEM     +P+VY +  L++ L +   
Sbjct: 468 KENCGSSSARV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGM 526

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L++A   +++++ +  +P    YN +++G  K G    A  +++ M++   +PD V++  
Sbjct: 527 LDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNT 586

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           ++      G   EA  +  +M  +G   D IT +S++  + K
Sbjct: 587 VLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 167/365 (45%), Gaps = 71/365 (19%)

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V KA   FY + +  C P    YN++I  L    +  + HEL  E+  +    PD +TY+
Sbjct: 175 VSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYS 234

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++IS +CKLG+ D AT + NEM   G++P+   + +LI  F K+ ++  A  + E M   
Sbjct: 235 ALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQ 294

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PDV T++ LI G  + G++++      EM+ +   P+      +IN L K  RL+DA
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDA 354

Query: 457 RRFLKQ------------------------------------LKWNDLVPKPFMYNPVID 480
            +  ++                                    +K + + P  F Y+ +ID
Sbjct: 355 MKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 414

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI-------------------------- 514
           GFCK   +++A +++ EM+EK   P    +  LI                          
Sbjct: 415 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474

Query: 515 --------IGHCMK-GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                   I H  K GR+ +AI++F++M ++GCAPD    N+L+S L + GM +EA   M
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 534

Query: 566 QRASE 570
           +R  E
Sbjct: 535 RRMQE 539



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 1/225 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++   C+    +   ++ + M   G  P        + +  +A + D A  L  + 
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    + S  +Y  ++  L K    D+A+ MF E  +L   PD + +N L+ GL+R G +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGML 527

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   GC PDI +YN +++GL +     R  E+L  +K +S   PDVV+Y +
Sbjct: 528 DEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK-QSTVRPDVVSYNT 586

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           V+      G  ++A  +  EMN+ G +   +T++ +++  GKV +
Sbjct: 587 VLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDH 631



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 71/162 (43%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S + Y ++++ L + G  D    +FD M   G  P+       +S   R G  D A   +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 534

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +          YN +LN L K      A+ M     +   +PD  ++N ++  LS  
Sbjct: 535 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 594

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           G  ++A +   +M + G   D++TY++++  + +V+    G 
Sbjct: 595 GMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDHEYTGQ 636



 Score = 45.4 bits (106), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 2/145 (1%)

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL-VPKPFMYNPVIDGFCKAGN 487
           K +N   +  T+  LI  L    +  +  + ++++  N + V  P   + V+     A  
Sbjct: 115 KRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKM 174

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVN 546
           V +A  I  +++ ++C+P    +  +II    +G+  +   ++N+M   G C PD +T +
Sbjct: 175 VSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYS 234

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
           +LIS   K G  + A +++    E+
Sbjct: 235 ALISAFCKLGRRDSATQLLNEMKEN 259


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 209/437 (47%), Gaps = 5/437 (1%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           E++   N L  + R    + G KFLE       +       +L+ R LC+ G       V
Sbjct: 109 EEVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLI-RGLCKTGKTWKATRV 167

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
            + +   G +P+       +S   + G+  +A  LL +     V+     YN++L  L  
Sbjct: 168 MEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCD 224

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                EA+ +     +    PD  T+ ILI+   +   V +A +   +M   GC PD+VT
Sbjct: 225 SGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVT 284

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YN LI+G+C+   +      L  +       P+V+T+  ++   C  G+   A     EM
Sbjct: 285 YNVLINGICKEGRLDEAIRFLNHMP-SYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM 343

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G  PS VTFN+LI+   + G +  A  + E+M   G  P+ ++++ L+   C++ ++
Sbjct: 344 IRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKM 403

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            + ++  D M  +   P++ T+  L+ ALCK+ +++ A   L QL      P    YN V
Sbjct: 404 ERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTV 463

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           IDG  K G  D+A  ++ EM+ K  KPD +T++ L+ G   +G++ EAI+ F+ +  +G 
Sbjct: 464 IDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGV 523

Query: 539 APDDITVNSLISCLLKG 555
            P+ IT NS++  L K 
Sbjct: 524 KPNAITYNSIMLGLCKA 540



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 202/389 (51%), Gaps = 3/389 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           +S++    TYN ++R+LC+ G L ++++V+   M+ + + P+       + +  +     
Sbjct: 206 MSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECY-PDVITYTILIEATCKESGVG 264

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL + R          YN L+N + K+   DEA+           QP+  T NI++
Sbjct: 265 QAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIIL 324

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           + +   G    A +F  +M   GCSP +VT+N LI+ LCR   + R  ++L+++  +   
Sbjct: 325 RSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMP-QHGC 383

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P+ ++Y  ++   CK  KM++A    + M S G  P  VT+N L+    K G +  A  
Sbjct: 384 TPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 443

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  ++ S G  P ++T++++IDG  + G+ +  +KL DEMKGK L P++ T++ L+  L 
Sbjct: 444 ILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLS 503

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +E ++++A  F   L+   + P    YN ++ G CKA     A   +A M  + CKP + 
Sbjct: 504 REGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTET 563

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++ ILI G   +G   EA+ + N++   G
Sbjct: 564 SYMILIEGLAYEGLAKEALELLNELCSRG 592



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 202/408 (49%), Gaps = 4/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G   S   + D M      P+       + +   +GK   A  +L + 
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E       Y  L+ A  K++   +A+ +  E      +PD  T+N+LI G+ + G +
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A  F   M S+GC P+++T+N ++  +C         + L E+  +   SP VVT+  
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM-IRKGCSPSVVTFNI 357

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C+ G + +A  +  +M   G  P+++++N L+    K   M  A    + M+S G
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+++L+   C++G+++  +++ +++  K  SP + T+  +I+ L K  + +DA 
Sbjct: 418 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAI 477

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L ++K   L P    Y+ ++ G  + G VDEA     ++EE   KP+ +T+  +++G 
Sbjct: 478 KLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 537

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C   + V AI     M+  GC P + +   LI  L   G+  EA  ++
Sbjct: 538 CKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELL 585



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 172/336 (51%), Gaps = 4/336 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
            SL+  L K     +A  + +      + PD  T+N+LI G  + GE+  A +    M  
Sbjct: 149 TSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS- 207

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
              SPD+VTYNT++  LC   ++    E+L   + + E  PDV+TYT +I   CK   + 
Sbjct: 208 --VSPDVVTYNTILRTLCDSGKLKEAMEVLDR-QMQRECYPDVITYTILIEATCKESGVG 264

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  + +EM   G KP  VT+NVLI+G  K G +  A      M S+G  P+V+T + ++
Sbjct: 265 QAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIIL 324

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
              C  G+     K   EM  K  SP+V TF ILIN LC++  +  A   L+++  +   
Sbjct: 325 RSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCT 384

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YNP++   CK   ++ A   +  M  + C PD VT+  L+   C  G++  A+ I
Sbjct: 385 PNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 444

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            N++   GC+P  IT N++I  L K G  ++A +++
Sbjct: 445 LNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 185/389 (47%), Gaps = 4/389 (1%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M   G +P+       +    + GK   A  ++              YN L++   K   
Sbjct: 136 MVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGE 195

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
              A+ +     R+   PD  T+N +++ L   G++K+A E         C PD++TY  
Sbjct: 196 IGSALQLLD---RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTI 252

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI   C+ + V +  +LL E++ K    PDVVTY  +I+G CK G++D+A    N M S 
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKG-CKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSY 311

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G +P+ +T N+++      G  + AE     M+  G  P VVTF+ LI+  CR G + + 
Sbjct: 312 GCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRA 371

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           + + ++M     +PN  ++  L++ALCK+ ++  A  +L  +      P    YN ++  
Sbjct: 372 IDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTA 431

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G VD A  I+ ++  K C P  +T+  +I G    G+  +AI + ++M   G  PD
Sbjct: 432 LCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPD 491

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
            IT ++L+  L + G  +EA        E
Sbjct: 492 IITYSTLVGGLSREGKVDEAIAFFHDLEE 520



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 157/315 (49%), Gaps = 3/315 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAKGLLSQ 216
           TYN+++  +C+ G  D      ++M S G  PN       + S    G+  DA K L   
Sbjct: 284 TYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM 343

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G  + S   +N L+N L ++     A+ + ++  +    P++ ++N L+  L +  +
Sbjct: 344 IRKG-CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A E+   M S GC PDIVTYNTL++ LC+  +V    E+L ++  K   SP ++TY 
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG-CSPVLITYN 461

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +VI G  K+GK D A  + +EM   G+KP  +T++ L+ G  + G +  A      +   
Sbjct: 462 TVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEM 521

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+ +T++S++ G C+  Q  + +     M  +   P   ++ ILI  L  E    +A
Sbjct: 522 GVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEA 581

Query: 457 RRFLKQLKWNDLVPK 471
              L +L    +V K
Sbjct: 582 LELLNELCSRGVVKK 596



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%)

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           + G ++E    + +M  +   PD +  T LI G C  G+  +A  +   +   G  PD I
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRAS 569
           T N LIS   K G    A +++ R S
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMS 207


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 193/380 (50%), Gaps = 1/380 (0%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           S+  MG +++V  +   +   G   +   +   ++      + D    +LS+     +  
Sbjct: 71  SIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEP 130

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   + +LLN L  +   D+ + ++ +      QP+ +T+N++I  LS+ G+  +A  F 
Sbjct: 131 SIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFL 190

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M   GC P++V Y+TLI G C   ++     +  ++      +P+V TYTS+++GYCK
Sbjct: 191 KQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF-DLMVSKGCTPNVYTYTSLMNGYCK 249

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           + ++++A  + +E    G+ P  VTF  +I G  + G  ++A+ +   + + G+ P+++T
Sbjct: 250 IERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMT 309

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +  L+DG C++G L +   L  EM+   + PN+  +TILI++LCK  ++ D +    +L 
Sbjct: 310 YGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLI 369

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              L P  + Y  ++   CK G + EA+ +  +MEE  C PDK  + ++I G        
Sbjct: 370 DEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPS 429

Query: 525 EAISIFNKMLRIGCAPDDIT 544
            A  +  +M+  G + D  T
Sbjct: 430 MARQLVEEMVNRGFSADAAT 449



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 183/343 (53%), Gaps = 1/343 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           ++ L +++V+  + +  VY+ KE   L  + D  + +ILI     +  V         + 
Sbjct: 65  FSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL 124

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P IVT+ TL++GLC   ++ +   L  ++  +    P+V TY  +I+   K GK 
Sbjct: 125 KLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG-LQPNVYTYNVIINSLSKSGKA 183

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++A G   +M   G  P+ V ++ LIDG+   G M  A  + + M+S G  P+V T++SL
Sbjct: 184 NEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSL 243

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ++GYC+  ++ + ++L DE   K L P++ TFT +I+ LC+  R   A++  + +  +  
Sbjct: 244 MNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGH 303

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  ++DG CK GN++EA  +  EM+    KP+ V +TILI   C  G++ +   
Sbjct: 304 TPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKE 363

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +F++++  G  P+  T  +L+  L K G+  EA ++ ++  ED
Sbjct: 364 LFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEED 406



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 192/381 (50%), Gaps = 3/381 (0%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   ++EF    SS +R G  +    L  +     +       + L+N     +  D  +
Sbjct: 58  PLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGL 117

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  +L  +P   TF  L+ GL   G++ +    + DM   G  P++ TYN +I+ L
Sbjct: 118 SVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSL 177

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
            +  +       LK+++ K    P+VV Y+++I GYC  G+MD+A  +++ M S G  P+
Sbjct: 178 SKSGKANEALGFLKQME-KVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+  L++G+ K+  +  A  + +  L  G +PD+VTF+++I G CR G+     +L  
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            +     +PN+ T+ +L++ LCK   L +A    ++++ + + P   +Y  +ID  CK G
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            + +   + + + ++  KP+  T+T L+   C +G ++EA  +F KM   GC PD    N
Sbjct: 357 KIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYN 416

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
            +I   L+   P+ A ++++ 
Sbjct: 417 VIIQGFLQHKDPSMARQLVEE 437



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 178/366 (48%), Gaps = 36/366 (9%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + L L  S  T+  ++  LC  G  D V +++D M   G  PN                 
Sbjct: 124 LKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPN----------------- 166

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
                              + YN ++N+L K   A+EA+   K+  ++   P+   ++ L
Sbjct: 167 ------------------VYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTL 208

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G    G++ +A   F  M S GC+P++ TY +L++G C++  +    +LL E   +  
Sbjct: 209 IDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDET-LRKG 267

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD+VT+T++ISG C+ G+   A  ++  + + G  P+ +T+ VL+DG  K GN+  A 
Sbjct: 268 LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAF 327

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M      P++V ++ LID  C+ G++  G +L   +  + L PNVYT+T L+ AL
Sbjct: 328 ALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGAL 387

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CKE  + +A +  ++++ +   P    YN +I GF +  +   A  +V EM  +    D 
Sbjct: 388 CKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADA 447

Query: 508 VTFTIL 513
            T  +L
Sbjct: 448 ATRALL 453


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 197/400 (49%), Gaps = 18/400 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ +LCE G     + +FD M+  G  PN       +S   +    ++A  L  + 
Sbjct: 223 TYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQEL 282

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +  ++ +L++   K     EA  MF E  R    P    +N L+ G  R G  
Sbjct: 283 LKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNA 342

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   + +M   G  PD  T + ++ GLC   ++      L+ V+ +   + +   Y +
Sbjct: 343 QEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ-EDGVNLNAAAYNA 401

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YC++G +++A      M   GI+P+ V+++ LIDG  K G M  A  +   M++ G
Sbjct: 402 LIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKG 461

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT+++LI G+ +NG ++   +L  EM    +SPN  T ++L++ LC+ENR+ +A 
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521

Query: 458 RFLKQ---LKWND--------------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           RF+ +   LK +D              L+P   +Y  +I G    G   EA  + + M +
Sbjct: 522 RFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRK 581

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
               PD  T+T+LI G CM G ++ A+ ++  M++IG  P
Sbjct: 582 SGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 178/342 (52%), Gaps = 1/342 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N++L+ LVK      A  +F E  R    P   T+N LI      G V KA E +  M +
Sbjct: 155 NAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVA 214

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               P++VTY T+I  LC    +     L   +K ++   P+  TY  ++SG+C+   ++
Sbjct: 215 QQIDPNVVTYTTMICALCEEGCIGDAERLFDAMK-EAGMQPNQYTYNVLMSGHCQRDDVN 273

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  +Y E+   G+ P+AV F  LIDGF K      A+ M   M  FG  P V  ++SL+
Sbjct: 274 SAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLM 333

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG  R+G   + L L  EM    L P+ +T +I++  LC   +++ A RFL+ ++ + + 
Sbjct: 334 DGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVN 393

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                YN +ID +C+ GN++EA      M E   +P+ V+++ LI GH  +G+M  A++I
Sbjct: 394 LNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAI 453

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + +M+  G  P+ +T  +LI    K G  + AFR+ +   E+
Sbjct: 454 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIEN 495



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 190/405 (46%), Gaps = 4/405 (0%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           +L +MGL D    VF  +R+   LP  P     +   ++A +   A  L  +     +  
Sbjct: 128 ALSQMGLLDEALYVFRRLRT---LPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVP 184

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   YN+L+NA   Q    +A  ++ +       P+  T+  +I  L   G +  A   F
Sbjct: 185 SVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLF 244

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M   G  P+  TYN L+SG C+ ++V     L +E+  KS  +P+ V +T++I G+CK
Sbjct: 245 DAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQEL-LKSGLNPNAVIFTTLIDGFCK 303

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
             +  +A G++ EM   G+ P+   +N L+DG  + GN   A  + + M   G  PD  T
Sbjct: 304 AKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFT 363

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
            S ++ G C  GQ++   +    ++   ++ N   +  LI+  C+   L +A     ++ 
Sbjct: 364 CSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMT 423

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    Y+ +IDG  K G +  A  I  EM  K  +P+ VT+T LI GH   G + 
Sbjct: 424 EVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID 483

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            A  +  +M+  G +P+ ITV+ L+  L +     EA R +   S
Sbjct: 484 AAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYS 528



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 189/418 (45%), Gaps = 20/418 (4%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++ +    G     Q V+D M +    PN       + +    G    A+ L 
Sbjct: 185 SVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLF 244

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              +   +  + + YN L++   ++++ + AV +++E  +    P+   F  LI G  + 
Sbjct: 245 DAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKA 304

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
               +A   F +M  FG +P +  YN+L+ G  R         L +E+  +    PD  T
Sbjct: 305 KRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMT-RLGLCPDEFT 363

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            + V+ G C  G+M  A      +   G+  +A  +N LID + ++GN+  A     RM 
Sbjct: 364 CSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMT 423

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+VV++SSLIDG+ + G++   + +  EM  K + PNV T+T LI+   K   ++
Sbjct: 424 EVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID 483

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE----------------- 497
            A R  K++  N + P     + ++DG C+   V EA   V E                 
Sbjct: 484 AAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFT 543

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI--SCLL 553
           +EE+   P+ V +  LI G  + G+  EA  +F+ M + G  PD  T   LI   C+L
Sbjct: 544 IEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCML 601



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 22/369 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++M   C+    +S  V++  +   G  PN+ +    +    +A +   AKG+  + 
Sbjct: 258 TYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEM 317

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  +YNSL++   +  NA EA+ +++E  RL   PD +T +I+++GL   G++
Sbjct: 318 PRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQM 377

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--FSPDVVTY 335
             A  F   +   G + +   YN LI   CR+  +    E L      +E    P+VV+Y
Sbjct: 378 HVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNL---EEALATCTRMTEVGIEPNVVSY 434

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +S+I G+ K GKM  A  IY EM + GI+P+ VT+  LI G  K G + +A  + + M+ 
Sbjct: 435 SSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIE 494

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG-----------------KNLSPNVY 438
            G  P+ +T S L+DG CR  ++ + ++   E  G                 + L PN  
Sbjct: 495 NGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSV 554

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  LI  L  + +  +A +    ++ + ++P  F Y  +I G C  G V  A ++ A+M
Sbjct: 555 IYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADM 614

Query: 499 EEKRCKPDK 507
            +   KP +
Sbjct: 615 MKIGVKPTR 623



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 124/242 (51%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P +    +V+ G  K  +   A  +++EM   G+ PS VT+N LI+     G +  A+ +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M++    P+VVT++++I   C  G +    +L D MK   + PN YT+ +L++  C+
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            + +N A    ++L  + L P   ++  +IDGFCKA    EA  +  EM      P    
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  L+ G    G   EA++++ +M R+G  PD+ T + ++  L  GG  + A R +Q   
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388

Query: 570 ED 571
           ED
Sbjct: 389 ED 390



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 18/232 (7%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N +   YN ++   C +G  +        M   G  PN       +    + GK   A 
Sbjct: 392 VNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAM 451

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + ++     +  +   Y +L++   K    D A  + KE       P+  T ++L+ GL
Sbjct: 452 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGL 511

Query: 272 SRIGEVKKAFEFFYDMGSFGCS-----------------PDIVTYNTLISGLCRVNEVAR 314
            R   V++A  F  +     CS                 P+ V Y TLI GL    +   
Sbjct: 512 CRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCE 571

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
             +L   ++ KS   PD  TYT +I G C LG +  A  +Y +M   G+KP+
Sbjct: 572 AGKLFSYMR-KSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPT 622


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 190/381 (49%), Gaps = 3/381 (0%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P   F   +SS ++         L  QF+   VT +    N L+N      +   A 
Sbjct: 89  PPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAF 148

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F    +    PD  T N LI+GL   GE+K+A  F   + + G   D V+Y TLI+GL
Sbjct: 149 SVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGL 208

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+  E      LL++++  S   PDVV YT++I   CK  ++  A  +Y+EM   GI P+
Sbjct: 209 CKAGETKAVARLLRKLEGHS-VKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPN 267

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+N LI GF  +GN+  A  +   M      PDV TF+ LID   + G++++ + L +
Sbjct: 268 VFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFE 327

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EMK KN+ PN+ T+T LI+ LCK + L  A    K++K   + P  + Y  ++D  CK G
Sbjct: 328 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG 387

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            ++ A      +  K    +  T+ ++I G C  G   + + + +KM   GC PD IT  
Sbjct: 388 RLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFK 447

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
           ++I  L +    ++A + ++ 
Sbjct: 448 TIICALFEKDENDKAEKFLRE 468



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 155/306 (50%), Gaps = 1/306 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +++ LC  G         D + + G   +       ++   +AG+  A   LL + 
Sbjct: 165 TLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL 224

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V     MY ++++ L K     +A  ++ E       P+ +T+N LI G   +G +
Sbjct: 225 EGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNL 284

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+AF    +M     +PD+ T+N LI  L +  ++     L +E+K K+ F P++VTYTS
Sbjct: 285 KEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMF-PNIVTYTS 343

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK   +++A  +  +M   GI+P   ++ +L+D   K G + +A+   + +L  G
Sbjct: 344 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y  +V T++ +I+G C+ G     + L  +M+GK   P+  TF  +I AL +++  + A 
Sbjct: 404 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 463

Query: 458 RFLKQL 463
           +FL+++
Sbjct: 464 KFLREM 469



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 144/282 (51%), Gaps = 2/282 (0%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P    ++ ++S L +         L K+ +  +  +P++ T   +I+ +C L  +  A  
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQ-SNGVTPNLCTLNILINCFCHLAHITFAFS 149

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           ++  +   G  P A+T N LI G    G +  A Y  +++++ G+  D V++ +LI+G C
Sbjct: 150 VFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLC 209

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G+     +L  +++G ++ P+V  +T +I+ LCK  R+ DA     ++    + P  F
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVF 269

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN +I GFC  GN+ EA  ++ EM+ K   PD  TF ILI     +G++ EAIS+F +M
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
                 P+ +T  SLI  L K      A  + ++  E Q +Q
Sbjct: 330 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE-QGIQ 370



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 1/276 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G   +V  +   +      P+  M    +    +  +   A  L S+ 
Sbjct: 200 SYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEM 259

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ + F YN+L+       N  EA  +  E       PD +TFNILI  L + G++
Sbjct: 260 IVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKI 319

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F +M      P+IVTY +LI GLC+ + + R   L K++K +    PDV +YT 
Sbjct: 320 DEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMK-EQGIQPDVYSYTI 378

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK G+++ A   +  +   G   +  T+NV+I+G  K G       ++ +M   G
Sbjct: 379 LLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKG 438

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +PD +TF ++I       + ++  K   EM  + L
Sbjct: 439 CMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 35/252 (13%)

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A   +N M      P    F+ ++    K  + ++   + ++  S G  P++ T + LI+
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL--------------------------- 443
            +C    +     +   +  +   P+  T   L                           
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196

Query: 444 --------INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
                   IN LCK        R L++L+ + + P   MY  +I   CK   V +A  + 
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           +EM  K   P+  T+  LI G C+ G + EA S+ N+M      PD  T N LI  L K 
Sbjct: 257 SEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKE 316

Query: 556 GMPNEAFRIMQR 567
           G  +EA  + + 
Sbjct: 317 GKIDEAISLFEE 328



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 73/172 (42%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+N+++ +L + G  D    +F+ M+     PN       +    +    + A
Sbjct: 298 NINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERA 357

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  + +   +    + Y  LL+AL K    + A   F+         +  T+N++I G
Sbjct: 358 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMING 417

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           L + G      +    M   GC PD +T+ T+I  L   +E  +  + L+E+
Sbjct: 418 LCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM 469


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 216/469 (46%), Gaps = 5/469 (1%)

Query: 109 LSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
           L    AR+     S L   ++++R  +P     FL  S  + +       +N ++ +L  
Sbjct: 84  LHSLAARHRIPPPSALLLSKLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGR 143

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPG-EVTMST 226
            G    +  +F  MR     P+       ++   ++G   DA K L     PG +V    
Sbjct: 144 AGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDI 203

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQGLSRIGEVKKAFEFF 284
            + N++++ L K     +A+    E  R      P+  T+N L     R+G++  A +  
Sbjct: 204 AILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIV 263

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-FKSEFSPDVVTYTSVISGYC 343
             M   G +P+++T NT+I GLCRV  V    E  +E +    E   + VTY+++ S + 
Sbjct: 264 ARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFL 323

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
               +D A  +++EM   G +P AV +  +I G  + G ++ A      M   G+  D  
Sbjct: 324 HCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAK 383

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            ++ LI G+CR  +L++  +L +EMKG  L P+VYT+  L++ LCK    +     L  +
Sbjct: 384 AYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHM 443

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
             +   P    +  ++ G+CKAG  DEA  I   M+E R +P+ V +  LI   C    +
Sbjct: 444 IDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREV 503

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
             AI +F++M       +  T N+L+  L    M  +AF +M R  E++
Sbjct: 504 DVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREER 552


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 186/363 (51%), Gaps = 7/363 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
             P  +T ST     L+N    +     A+ +F        +P+  +++I+I+GL R+G+
Sbjct: 157 LEPNVITFST-----LINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGK 211

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +  +    M   GC PD+V YNT++  LC+   V     +  ++K  +   P VVTYT
Sbjct: 212 TTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK-GTGILPTVVTYT 270

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I G   LG+  +A G+ NEM    I P  V F+VLID   K G +  A  + + M   
Sbjct: 271 SLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM 330

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV T+++L++GYC   ++ +  K+ + M  K   P+V++F+IL+N  CK  R+++A
Sbjct: 331 GVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEA 390

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++   ++    L+P    YN +I G C+A    EA  +  +M      P+ VT++IL+  
Sbjct: 391 KQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDC 450

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
              +G + +A+ +F  M   G  PD +T N +I  + K G   +A  +    S  + LQ 
Sbjct: 451 LSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSV-KGLQP 509

Query: 577 PSW 579
            +W
Sbjct: 510 NNW 512



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 187/395 (47%), Gaps = 36/395 (9%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + L L  +  T++ ++   C  G       +FD M + G+ PN       +    R GK 
Sbjct: 153 IKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKT 212

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF------------------ 249
                LL   +         +YN++++ L K    +EAV++F                  
Sbjct: 213 TEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSL 272

Query: 250 ----------KEYFRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
                     KE F L ++       PD   F++LI  + + GEV +A      M   G 
Sbjct: 273 IHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGV 332

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PD+ TYNTL++G C   EV    ++  EV       PDV +++ +++GYCK  ++D+A 
Sbjct: 333 EPDVATYNTLMNGYCLRMEVVEARKVF-EVMISKGRMPDVFSFSILVNGYCKAKRIDEAK 391

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +++EM   G+ P  V++N LI G  +    + AE + + M S GY P++VT+S L+D  
Sbjct: 392 QLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCL 451

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            + G L+Q + L   M+   L P++ T+ I+I+ +CK  +  DAR    +L    L P  
Sbjct: 452 SKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNN 511

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           ++  P IDG CK G +DEA+    +ME+  C P +
Sbjct: 512 WVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 193/397 (48%), Gaps = 2/397 (0%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           F++M +   LP+        S+ +R         L  Q     ++        L+N   +
Sbjct: 79  FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
             + D    +  +  +L  +P+  TF+ LI G    G++ +A E F  M + G  P++ +
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y+ +I GLCRV +     +LL+ +K      PDVV Y +++   CK   +++A  I+ +M
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVG-CEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM 257

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              GI P+ VT+  LI G   +G    A  +   M     +PD+V FS LID  C+ G++
Sbjct: 258 KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEV 317

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++   +   M    + P+V T+  L+N  C    + +AR+  + +     +P  F ++ +
Sbjct: 318 SEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSIL 377

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           ++G+CKA  +DEA  +  EM  +   PD V++  LI G C   R +EA  +F  M   G 
Sbjct: 378 VNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGY 437

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            P+ +T + L+ CL K G  ++A  +  RA E+  L+
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLF-RAMENSGLK 473



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 169/330 (51%), Gaps = 1/330 (0%)

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           N ++A+  F         P    F  L   L R+   K        M   G S D+++  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI+  CR+  V  G  +L ++  K    P+V+T++++I+G+C  GK+ +A  +++ M +
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKI-IKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G KP+  +++++I G  +VG       + E M   G  PDVV +++++D  C++  +N+
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            + +  +MKG  + P V T+T LI+ L    R  +A   L ++K  +++P    ++ +ID
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             CK G V EA VI+  M E   +PD  T+  L+ G+C++  +VEA  +F  M+  G  P
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D  + + L++   K    +EA ++    + 
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTH 399


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 170/328 (51%), Gaps = 1/328 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N L+  +++      A  +F E  R   QP   TFN L+ G+ +  ++  A      M 
Sbjct: 245 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 304

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G +PD+ TY   I GLC+   +    E+ +E+  +   +P+ V  T++I  +CK G +
Sbjct: 305 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG-LNPNTVVLTTLIDAHCKEGDV 363

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
                +  EM + G+K   V +N L++GF +V +M +A  + E M   G  PD VT+++L
Sbjct: 364 TAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL 423

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG C+ G+L+  +++  EM  + ++ +  T+T LI+ L K  R  DA R L ++    L
Sbjct: 424 IDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGL 483

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  VID FCK G+V      + EM+ K   P  VT+ +++ G C  G+M  A  
Sbjct: 484 QPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADM 543

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGG 556
           + N ML IG  P+DIT N L+    K G
Sbjct: 544 LLNAMLNIGVCPNDITYNILLDGHCKHG 571



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 162/332 (48%), Gaps = 1/332 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + +N++MR +   G   S + VFD M   G  P        +S   +A   + A  L   
Sbjct: 243 RQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGL 302

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +    + Y + +  L K     +A+ MF+E       P+T     LI    + G+
Sbjct: 303 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 362

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V    E  ++M + G   D+V YN L++G CRV ++   +++++E++ K    PD VTYT
Sbjct: 363 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR-KDGLKPDKVTYT 421

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G CK G++D A  +  EM+  G+    VT+  LI G  K G  V AE +   M+  
Sbjct: 422 TLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEA 481

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T++ +ID +C+NG +  G K   EM+ K  +P + T+ +++N  C   ++ +A
Sbjct: 482 GLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNA 541

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
              L  +    + P    YN ++DG CK G V
Sbjct: 542 DMLLNAMLNIGVCPNDITYNILLDGHCKHGKV 573



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 174/343 (50%), Gaps = 1/343 (0%)

Query: 181 YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
           ++   G  P +      +   IR+GK  +A+ +  +     V  +   +N+L++ + K +
Sbjct: 232 HLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKAS 291

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           + + A  +     +    PD +T+   IQGL + G ++ A E F +M   G +P+ V   
Sbjct: 292 DLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLT 351

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           TLI   C+  +V  G EL  E+  +     D+V Y ++++G+C++  M  A  I  EM  
Sbjct: 352 TLIDAHCKEGDVTAGLELRWEMATRG-VKADLVAYNALVNGFCRVRDMKAANDIVEEMRK 410

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+KP  VT+  LIDG  K G + +A  M++ M   G   D VT+++LI G  + G+   
Sbjct: 411 DGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVD 470

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             ++  EM    L P+  T+T++I+A CK   +    + LK+++     P    YN V++
Sbjct: 471 AERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMN 530

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           GFC  G +  A++++  M      P+ +T+ IL+ GHC  G++
Sbjct: 531 GFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKV 573



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 144/296 (48%), Gaps = 1/296 (0%)

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           ++R+  V +A+ F+  +   G  P+   +N L+  + R  ++A    +  E+  +    P
Sbjct: 217 MNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEM-LRRGVQP 275

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            VVT+ +++SG CK   ++ A  +   M   GI P   T+   I G  K G +  A  M 
Sbjct: 276 TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMF 335

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E M   G  P+ V  ++LID +C+ G +  GL+L  EM  + +  ++  +  L+N  C+ 
Sbjct: 336 EEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRV 395

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             +  A   +++++ + L P    Y  +IDG CK G +D A  +  EM ++    D VT+
Sbjct: 396 RDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTY 455

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           T LI G    GR V+A  I  +M+  G  PD+ T   +I    K G     F+ ++
Sbjct: 456 TALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLK 511



 Score = 38.5 bits (88), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 25/143 (17%)

Query: 115 RYLCE----KLSPLNS-----LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRS 165
           R LCE     L P N+     ++   +  + K G K L+  + N   N    TYN+VM  
Sbjct: 473 RILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQ-NKGKNPGIVTYNVVMNG 531

Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC------DAAKGLLSQFRP 219
            C +G   +  ++ + M + G  PN       +    + GK        +AKG++S F  
Sbjct: 532 FCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSAKGMVSDFG- 590

Query: 220 GEVTMSTFMYNSLLNALVKQNNA 242
                   +Y SL+N  VK+ +A
Sbjct: 591 --------VYTSLINEFVKKKSA 605


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 194/378 (51%), Gaps = 41/378 (10%)

Query: 227 FMYNSLLNALVKQNNADEAV---YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           F YN+LL  L  +N + EA+   +M  +     S PD  ++N ++ G  + G+  KA+  
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
           +++M   G  PD+VTY+++I+ LC+   + +  E+L  +  K+   PD +TY S++ GYC
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYC 282

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
             G+  +A G   +M S G++P+ VT++ L++   K G    A  + + M   G  PD+ 
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+ +L+ GY   G L +   L D M    + P+ + F ILI A  K+ +++ A     ++
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG------- 516
           + + L P    Y  VID  CK+G+VD+A +   +M ++   P+ + +T LI G       
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 517 ----------------------------HCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
                                       HC +GR++E+  +F+ M+RIG  PD IT N+L
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 549 I-SCLLKGGMPNEAFRIM 565
           I  C L G M +EA +++
Sbjct: 523 IDGCCLAGKM-DEATKLL 539



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 192/395 (48%), Gaps = 1/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+    + G  D     +  M   G LP+       +++  +A   D A  +L+  
Sbjct: 203 SYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM 262

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      YNS+L+         EA+   K+      +P+  T++ L+  L + G  
Sbjct: 263 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS 322

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M   G  PDI TY TL+ G      +   H LL ++  ++   PD   +  
Sbjct: 323 TEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL-DLMVRNGIQPDHHVFNI 381

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y K  K+D+A  ++++M   G+ P+ V +  +ID   K G++  A    E+M+  G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++ ++SLI G C   + ++  +L  EM  + +  N   F  +I++ CKE R+ ++ 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    + P    YN +IDG C AG +DEA  ++A M     KPD VT+  LI G+
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           C   RM +A+++F +M+  G +P+ IT N ++  L
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 194/434 (44%), Gaps = 36/434 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ +M  LC+ G     + +FD M   G  P+       +      G       LL   
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     ++N L+ A  KQ   D+A+ +F +  +    P+   +  +I  L + G V
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +F  M   G +P+I+ Y +LI GLC  ++  +  EL+ E+        + + + S
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIFFNS 486

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK G++ ++  +++ M   G+KP  +T+N LIDG    G M  A  +   M+S G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI------------- 444
             PD+VT+ +LI+GYCR  +++  L L  EM    +SPN+ T+ I++             
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 445 ----------------------NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                                 + LCK N  ++A R  + L   DL  +   +N +I   
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G +DEA  + A        PD  T++++      +G + E   +F  M   GC+ D 
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726

Query: 543 ITVNSLISCLLKGG 556
             +NS++  LL+ G
Sbjct: 727 RMLNSIVRKLLQRG 740



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 182/404 (45%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G           MRSDG  PN       ++   + G+   A+ +    
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +LL     +    E   +     R   QPD   FNILI   ++  +V
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G +P++V Y T+I  LC+   V     L  E       +P+++ YTS
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM-LYFEQMIDEGLTPNIIVYTS 451

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   K DKA  +  EM   GI  + + FN +ID   K G ++ +E + + M+  G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++T+++LIDG C  G++++  KL   M    + P++ T+  LIN  C+ +R++DA 
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K++  + + P    YN ++ G         A  +   + +   + +  T+ I++ G 
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C      EA+ +F  +       +  T N +I  LLK G  +EA
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 165/346 (47%), Gaps = 3/346 (0%)

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
           G+VT +   Y  L+    +    D          +   + D  TF  L++GL        
Sbjct: 86  GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSD 145

Query: 280 AFEF-FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK--SEFSPDVVTYT 336
           A +     M   GC PD+ +YN L+ GLC  N      ELL  +         PDVV+Y 
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYN 205

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +V++G+ K G  DKA   Y+EM   GI P  VT++ +I    K   M  A  +   M+  
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD +T++S++ GYC +GQ  + +    +M+   + PNV T++ L+N LCK  R  +A
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R+    +    L P    Y  ++ G+   G + E + ++  M     +PD   F ILI  
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICA 385

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           +  + ++ +A+ +F+KM + G  P+ +   ++I  L K G  ++A 
Sbjct: 386 YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ +LC+    D    V + M  +G +P+       +     +G+   A G L + 
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V  +   Y+SL+N L K   + EA  +F    +   +PD  T+  L+QG +  G +
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGAL 357

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +       M   G  PD   +N LI    +  +V +   +  +++ +   +P+VV Y +
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR-QHGLNPNVVCYGT 416

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI   CK G +D A   + +M   G+ P+ + +  LI G         AE +   ML  G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + + F+S+ID +C+ G++ +  KL D M    + P++ T+  LI+  C   ++++A 
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L  +    + P    Y  +I+G+C+   +D+A  +  EM      P+ +T+ I++ G 
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               R   A  ++  + + G   +  T N ++  L K  + +EA R+ Q
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 167/354 (47%), Gaps = 1/354 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D   +VF  MR  G  PN       +    ++G  D A     Q     +T +  +Y SL
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++ L   +  D+A  +  E        +T  FN +I    + G V ++ + F  M   G 
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 512

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PDI+TYNTLI G C   ++    +LL  +       PD+VTY ++I+GYC++ +MD A 
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASM-VSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ EM S G+ P+ +T+N+++ G        +A+ +   +   G   ++ T++ ++ G 
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+N   ++ L++   +   +L     TF I+I AL K  R+++A+        N LVP  
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             Y+ + +   + G+++E + +   MEE  C  D      ++     +G +  A
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 3/150 (2%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
           DE+  +    ++Y     +  + + +      R+  + +     + P    Y  +I   C
Sbjct: 44  DELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCC 103

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
           +AG +D     +  + +K  + D +TFT L+ G C   R  +A+ I   +M  +GC PD 
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDV 163

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            + N+L+  L       EA  ++   ++D+
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDR 193


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 214/429 (49%), Gaps = 3/429 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L+ LE  +++ + N    +YN+++  LC+ G  ++   V D M+  G  PN   +   +
Sbjct: 396 ALRILEAMKMDAAPN--LTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMI 453

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               +A + D A  +         T  +  + SL++ L +    ++A  ++++       
Sbjct: 454 DRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQT 513

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+   +  LI+   + G  +   + + +M   GCSPD++  N  +  + +  E+ +G  L
Sbjct: 514 PNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRAL 573

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            +E+K +   +PDV +Y+ +I G  K G       ++ EM   G+      +N++IDGF 
Sbjct: 574 FEEIKAQG-LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFC 632

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G +  A  + E M + G  P VVT+ S+IDG  +  +L++   L +E K K +  NV 
Sbjct: 633 KSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVV 692

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            ++ LI+   K  R+++A   L++L    L P  + +N ++D   KA  +DEA V    M
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           +  +C P++VT++I++ G C   +  +A   + +M + G  P+ IT  ++IS L + G  
Sbjct: 753 KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNV 812

Query: 559 NEAFRIMQR 567
            EA  + +R
Sbjct: 813 LEAKDLFER 821



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 208/436 (47%), Gaps = 2/436 (0%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           VI+RL + ++ L +  +        HS + YN ++  +      + ++ + + M   G  
Sbjct: 105 VIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFG 164

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++      V+S +++ K   A G++   R  +   +   Y +L+ AL   + AD  + +
Sbjct: 165 PSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTL 224

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            ++   +  +     F  LI   +R G V  A     +M S   + D+V YN  I    +
Sbjct: 225 LRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGK 284

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
           V +V    +   E+K +    PD VT+TS+I   CK  ++D+A  ++ E++S    P   
Sbjct: 285 VGKVDMAWKFFHELKSQG-LVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVY 343

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            +N +I G+G VG    A  + ER    G +P V+ ++ ++    R G++ + L++ + M
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           K  + +PN+ ++ ILI+ LCK   L  A +    +K   L P     N +ID  CKA  +
Sbjct: 404 K-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           DEA  I   ++ K C PD VTF  LI G    G++ +A  ++ KML  G  P+ +   SL
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522

Query: 549 ISCLLKGGMPNEAFRI 564
           I    K G   +  +I
Sbjct: 523 IRNFFKCGRKEDGHKI 538



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 200/425 (47%), Gaps = 10/425 (2%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEM----GLHDSVQ---VVFDYMRSDGHLPNSPMIEF 196
           E   + L L+H   T + V  + C +    G H  V    ++++ M   G  PN+ +   
Sbjct: 464 EACSIFLGLDHKVCTPDSV--TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTS 521

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            + +  + G+ +    +  +      +    + N+ ++ + K    ++   +F+E     
Sbjct: 522 LIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG 581

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             PD  +++ILI GL + G  K  ++ FY+M   G   D   YN +I G C+  +V + +
Sbjct: 582 LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAY 641

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +LL+E+K K    P VVTY SVI G  K+ ++D+A  ++ E  S  +  + V ++ LIDG
Sbjct: 642 QLLEEMKTKG-LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDG 700

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           FGKVG +  A  + E ++  G  P+  T++ L+D   +  ++++ L     MK     PN
Sbjct: 701 FGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPN 760

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T++I++N LCK  + N A  F ++++   L P    Y  +I G  + GNV EA  +  
Sbjct: 761 EVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFE 820

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             +     PD   +  +I G     + ++A  +F +    GC     T   L+  L K  
Sbjct: 821 RFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKAD 880

Query: 557 MPNEA 561
              +A
Sbjct: 881 CLEQA 885



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 205/452 (45%), Gaps = 37/452 (8%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S N     YN+ +    ++G  D     F  ++S G +P+       +    +A + D A
Sbjct: 267 SFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEA 326

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +    +     + YN+++         +EA  + +   R    P    +N ++  
Sbjct: 327 VELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTC 386

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L R G+V++A      M     +P++ +YN LI  LC+  E+    ++   +K    F P
Sbjct: 387 LGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLF-P 444

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +++T   +I   CK  ++D+A  I+  ++     P +VTF  LIDG G+ G +  A  + 
Sbjct: 445 NIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLY 504

Query: 391 ERMLSFGYLPDVVTFSSLI----------DGY----------C---------------RN 415
           E+ML  G  P+ V ++SLI          DG+          C               + 
Sbjct: 505 EKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA 564

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G++ +G  L +E+K + L+P+V +++ILI+ L K     D  +   ++K   L      Y
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAY 624

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N VIDGFCK+G V++A  ++ EM+ K  +P  VT+  +I G     R+ EA  +F +   
Sbjct: 625 NIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 684

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
                + +  +SLI    K G  +EA+ I++ 
Sbjct: 685 KAVDLNVVVYSSLIDGFGKVGRIDEAYLILEE 716



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 3/287 (1%)

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           SP+   YN L+  + R   +    ++L+E+     F P   T   +++ + K  K+ +A 
Sbjct: 131 SPE--AYNALLMLMARTRNLEYLEQILEEMSMAG-FGPSNNTCIEMVASFVKSRKLREAF 187

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+   M     +P+   +  LI              +  +M   GY   V  F++LI  +
Sbjct: 188 GVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVF 247

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            R G+++  L L DEMK  + + ++  + + I+   K  +++ A +F  +LK   LVP  
Sbjct: 248 AREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDD 307

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             +  +I   CKA  VDEA  +  E++  +  P    +  +I+G+   G+  EA S+  +
Sbjct: 308 VTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLER 367

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
             R GC P  I  N +++CL + G   EA RI++    D    L S+
Sbjct: 368 QKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSY 414


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 185/361 (51%), Gaps = 1/361 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           +AG+ D A+ LL +     V ++   YN LL+   +Q N      + KE      +P   
Sbjct: 145 KAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVG 204

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL+ GLS  G++ K    F ++     + D+  Y+ +I+  CR   V R  E+  E 
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC 264

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
              +   P+  TY ++I+G+CK+G+++ A  +  +M   G+  + + FN +IDG+ + G 
Sbjct: 265 -VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGM 323

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  ++  M   G   DV T+++L  G CR  ++    KL   M    +  N  ++T 
Sbjct: 324 VDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTT 383

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+   KE  + +ARR  + ++     P    YN +IDG+ K+G++ EA     EME+K 
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD  T+  L+ GHC+ G++  A+ +F +M + G  P+ +   +LIS L K G   EAF
Sbjct: 444 LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAF 503

Query: 563 R 563
           +
Sbjct: 504 Q 504



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 181/400 (45%), Gaps = 11/400 (2%)

Query: 121 LSPLNSLEVIK------RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           ++PL++  V+       R+D+ +  L   E  R  + LN     YN ++ +         
Sbjct: 131 ITPLSASVVVDGFCKAGRMDDARRLLD--EMPRHGVKLNAC--CYNPLLDTYTRQKNDAR 186

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
           V  V   M S G  P        V     AG     + +  + +   V    + Y++++N
Sbjct: 187 VAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVIN 246

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           A  +  N   A  +F E      +P+  T+  LI G  +IG+++ A     DM   G   
Sbjct: 247 AYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGH 306

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + + +NT+I G CR   V +  E +K V  +     DV TY ++  G C++ +M+ A  +
Sbjct: 307 NQIIFNTMIDGYCRHGMVDKALE-IKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKL 365

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            + M   G++ + V++  LI    K G+MV A  +   M   G  P VVT++ +IDGY +
Sbjct: 366 LHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIK 425

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           +G + +  +   EM+ K L P+VYT+  L++  C   +++ A R  +++K     P    
Sbjct: 426 SGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVA 485

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           Y  +I G  K G  +EA      M      PD   +++L+
Sbjct: 486 YTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 153/322 (47%), Gaps = 3/322 (0%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           D  K+   F E  R N++ +  F  Y+ V+ + C  G       VFD    +G  PN   
Sbjct: 218 DISKVESVFDEIKRKNVAGDVYF--YSAVINAYCRAGNVRRASEVFDECVGNGIEPNERT 275

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               ++   + G+ +AA+ LL+  +   V  +  ++N++++   +    D+A+ +     
Sbjct: 276 YGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVME 335

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           R+  Q D +T+N L  GL R+  ++ A +  + M   G   + V+Y TLIS   +  ++ 
Sbjct: 336 RMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMV 395

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               L ++++ K    P VVTY  +I GY K G + +A     EM   G+ P   T+  L
Sbjct: 396 EARRLFRDMEGKGS-RPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAAL 454

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           + G    G +  A  + E M   G  P+VV +++LI G  + G+  +  +  D M    L
Sbjct: 455 VHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGL 514

Query: 434 SPNVYTFTILINALCKENRLND 455
           +P+   +++L+ +L  + R ++
Sbjct: 515 TPDDTLYSMLVGSLHTDKRKDE 536



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 128/239 (53%)

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           ++ + V+ G+CK G+MD A  + +EM   G+K +A  +N L+D + +  N      + + 
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G  P V T++ L+DG    G +++   + DE+K KN++ +VY ++ +INA C+   
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A     +   N + P    Y  +I+GFCK G ++ A +++ +M+ +    +++ F  
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +I G+C  G + +A+ I   M R+G   D  T N+L   L +     +A +++   +E+
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTEN 372


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 202/413 (48%), Gaps = 15/413 (3%)

Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG-------- 212
           +++ LC +    D++ +V   M   G +PN      F  + +  G CD  +         
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPN-----VFSYNILLKGLCDENRSQEALELLH 182

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +++  R G        Y +++N   K+ ++D+A   + E       PD  T+N +I  L 
Sbjct: 183 MMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALC 242

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   + KA E    M   G  PD +TYN+++ G C   +       LK+++      PDV
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR-SDGVEPDV 301

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY+ ++   CK G+  +A  I++ M   G+KP   T+  L+ G+   G +V    + + 
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G  PD   FS LI  Y   G+++Q + +  +M+ + L+PN  T+  +I  LCK  R
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           + DA  + +Q+    L P   +YN +I G C     + A  ++ EM ++    + + F  
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +I  HC +GR++E+  +F  M+RIG  P+ IT N+LI+     G  +EA +++
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 197/413 (47%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V+    + G  D     +  M   G LP+       +++  +A   D A  +L+  
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      YNS+L+         EA+   K+      +PD  T+++L+  L + G  
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M   G  P+I TY TL+ G      +   H LL ++  ++   PD   ++ 
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL-DLMVRNGIHPDHYVFSI 376

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y   GK+D+A  ++++M   G+ P+AVT+  +I    K G +  A    E+M+  G
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + ++SLI G C   +  +  +L  EM  + +  N   F  +I++ CKE R+ ++ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  + +    + P    YN +I+G+C AG +DEA  +++ M     KP+ VT++ LI G+
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C   RM +A+ +F +M   G +PD IT N ++  L +      A  +  R +E
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 182/404 (45%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G           MRSDG  P+       +    + G+C  A+ +    
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +LL     +    E   +     R    PD + F+ILI   +  G+V
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKV 387

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G +P+ VTY  +I  LC+   V     L  E       SP  + Y S
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM-LYFEQMIDEGLSPGNIVYNS 446

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   K ++A  +  EM   GI  + + FN +ID   K G ++ +E + E M+  G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V+T+++LI+GYC  G++++ +KL   M    L PN  T++ LIN  CK +R+ DA 
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+++ + + P    YN ++ G  +      A  +   + E   + +  T+ I++ G 
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C      +A+ +F  +  +    +  T N +I  LLK G  +EA
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 3/345 (0%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           EVT     Y  L+    +    D          +   + D   F  L++GL        A
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 281 FEF-FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTS 337
            +     M   GC P++ +YN L+ GLC  N      ELL  +         PDVV+YT+
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+ K G  DKA   Y+EM   GI P  VT+N +I    K   M  A  +   M+  G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD +T++S++ GYC +GQ  + +    +M+   + P+V T+++L++ LCK  R  +AR
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    L P+   Y  ++ G+   G + E + ++  M      PD   F+ILI  +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             +G++ +A+ +F+KM + G  P+ +T  ++I  L K G   +A 
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 197/426 (46%), Gaps = 2/426 (0%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
            PK  + FL+  R +  +     TY+L+M  LC+ G     + +FD M   G  P     
Sbjct: 281 QPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              +      G      GLL       +    ++++ L+ A   Q   D+A+ +F +  +
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQ 399

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               P+  T+  +I  L + G V+ A  +F  M   G SP  + YN+LI GLC  N+  R
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             EL+ E+        + + + S+I  +CK G++ ++  ++  M   G+KP+ +T+N LI
Sbjct: 460 AEELILEM-LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           +G+   G M  A  +   M+S G  P+ VT+S+LI+GYC+  ++   L L  EM+   +S
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T+ I++  L +  R   A+    ++  +    +   YN ++ G CK    D+A  +
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              +     K +  TF I+I      GR  EA  +F      G  P+  T   +   ++ 
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698

Query: 555 GGMPNE 560
            G+  E
Sbjct: 699 QGLLEE 704



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +LC+    D    V + M  +G +P+       +     +G+   A G L + 
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      Y+ L++ L K     EA  +F    +   +P+  T+  L+QG +  G +
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +       M   G  PD   ++ LI       +V +   +  +++ +   +P+ VTY +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMR-QQGLNPNAVTYGA 411

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI   CK G+++ A   + +M   G+ P  + +N LI G         AE +   ML  G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + + F+S+ID +C+ G++ +  KL + M    + PNV T+  LIN  C   ++++A 
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L  +    L P    Y+ +I+G+CK   +++A V+  EME     PD +T+ I++ G 
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               R   A  ++ ++   G   +  T N ++  L K  + ++A ++ Q
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 189/408 (46%), Gaps = 2/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +++++ +    G  D   +VF  MR  G  PN+      +    ++G+ + A     Q 
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++    +YNSL++ L   N  + A  +  E        +T  FN +I    + G V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++ + F  M   G  P+++TYNTLI+G C   ++    +LL  +       P+ VTY++
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM-VSVGLKPNTVTYST 551

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK+ +M+ A  ++ EM S G+ P  +T+N+++ G  +     +A+ +  R+   G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++ T++ ++ G C+N   +  L++   +   +L     TF I+I+AL K  R ++A+
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                   N LVP  + Y  + +     G ++E + +   ME+  C  D      ++   
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +G +  A   +  M+       + +  SL   LL GG   E +R +
Sbjct: 732 LQRGEITRA-GTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFL 778



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 7/314 (2%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF--FYDMGSFGCSPDIVTYN 300
           ++A ++F E  R       +  N  +  ++R         +      G+   +PD+ TY 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI-YNEMN 359
            LI   CR   +  G   L  V  K  F  D + +T ++ G C   +   A  I    M 
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNV-IKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 360 SCGIKPSAVTFNVLIDGF---GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
             G  P+  ++N+L+ G     +    +   +M       G  PDVV+++++I+G+ + G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
             ++      EM  + + P+V T+  +I ALCK   ++ A   L  +  N ++P    YN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G+C +G   EA   + +M     +PD VT+++L+   C  GR +EA  IF+ M + 
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 537 GCAPDDITVNSLIS 550
           G  P+  T  +L+ 
Sbjct: 331 GLKPEITTYGTLLQ 344



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 67/150 (44%), Gaps = 3/150 (2%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
           DE+  +    ++Y     +  + +++      R+  + +   +++ P    Y  +I   C
Sbjct: 39  DELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCC 98

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
           +AG +D     +  + +K  + D + FT L+ G C   R  +A+ I   +M  +GC P+ 
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            + N L+  L       EA  ++   ++D+
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDR 188


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 193/367 (52%), Gaps = 11/367 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
           +N ++ SL +   + +V  +   M   G  PN       ++S  + G   +A  +L++  
Sbjct: 65  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKIL 124

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNA-----DEAVYMFKEYFRLYSQPDTWTFNILI 268
              ++P  +T++T +    LN  +   +       +AV +F +       PD +TF IL+
Sbjct: 125 KMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILV 184

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  + G VK+A      M   G  P +VTYN+L+ G   V +V +   +   +  +   
Sbjct: 185 DGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA-QLGV 243

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SPD+ +Y+ +I+G+CK+  MD+A  +  EM+   I P+ VT++ LIDG  K G +  A  
Sbjct: 244 SPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALK 303

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G  P++VT+SS++D  C+N Q++  + L  +MK + + PN+YT+TILI  LC
Sbjct: 304 LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLC 363

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           +  +L DAR+  + L         + Y  +I GFC  G  DEA  ++++ME+  C P+  
Sbjct: 364 QSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAK 423

Query: 509 TFTILII 515
           T+ I+I+
Sbjct: 424 TYEIIIL 430



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 198/378 (52%), Gaps = 13/378 (3%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P IEF   + S +++        L  +     +  +    N L+N+  +  +   A 
Sbjct: 58  PTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAF 117

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSR----------IGEVKKAFEFFYDMGSFGCSPDI 296
            +  +  ++  +P+T T N LI+GL            +G++K A + F  M     +PD+
Sbjct: 118 SVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDV 177

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            T+  L+ G C+   V     +L  +  +    P VVTY S++ GY  + +++KA  I+N
Sbjct: 178 YTFTILVDGFCKEGRVKEAKNVLAMMMIQG-IKPGVVTYNSLMDGYFLVKQVNKAKSIFN 236

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M   G+ P   ++++LI+GF K+  M  A  + + M     +P+VVT+SSLIDG C++G
Sbjct: 237 TMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSG 296

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           +++  LKL DEM  +   PN+ T++ +++ALCK +++++A   L Q+K   + P  + Y 
Sbjct: 297 KISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYT 356

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I G C++G +++A  +  ++  K    +  T+T++I G C KG   EA+++ +KM   
Sbjct: 357 ILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDN 416

Query: 537 GCAPDDITVNSLISCLLK 554
           GC P+  T   +I  L K
Sbjct: 417 GCIPNAKTYEIIILSLFK 434



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 189/373 (50%), Gaps = 9/373 (2%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  L ++      T     +N +L +LVK  +    +Y+ ++      +P+    NIL
Sbjct: 44  DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 103

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK---- 323
           I    ++G +  AF     +   G  P+ +T NTLI GLC   ++   H ++ ++K    
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163

Query: 324 -----FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
                     +PDV T+T ++ G+CK G++ +A  +   M   GIKP  VT+N L+DG+ 
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
            V  +  A+ +   M   G  PD+ ++S LI+G+C+   +++ ++L  EM  K + PNV 
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV 283

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T++ LI+ LCK  +++ A + + ++      P    Y+ ++D  CK   VD A  ++ +M
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           + +  +P+  T+TILI G C  G++ +A  +F  +L  G   +  T   +I      G+ 
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLF 403

Query: 559 NEAFRIMQRASED 571
           +EA  ++ +  ++
Sbjct: 404 DEALTLLSKMEDN 416



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 174/354 (49%), Gaps = 17/354 (4%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-----------CIRAGKCD 208
           N+++ S C++G   S   V   +   G+ PN+  +   +             CI  GK  
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI-VGKLK 159

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L ++     +    + +  L++   K+    EA  +         +P   T+N L+
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G   + +V KA   F  M   G SPDI +Y+ LI+G C++  +    ELLKE+  K + 
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHK-QI 278

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+VVTY+S+I G CK GK+  A  + +EM+  G  P+ VT++ ++D   K   + +A  
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIA 338

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINA 446
           +  +M + G  P++ T++ LI G C++G+L    K+ +++  KG NL  NVYT+T++I  
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL--NVYTYTVMIQG 396

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            C +   ++A   L +++ N  +P    Y  +I    K    + A  ++ EM E
Sbjct: 397 FCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 25/244 (10%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P  + +  ++    K         +  +M   GIKP+ V  N+LI+ F ++G++ SA  
Sbjct: 59  TPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFS 118

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  ++L  GY P+ +T ++LI G C NG+++                         +  C
Sbjct: 119 VLTKILKMGYKPNTITLNTLIKGLCLNGKIH-------------------------DKHC 153

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              +L DA     ++   ++ P  + +  ++DGFCK G V EA  ++A M  +  KP  V
Sbjct: 154 IVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVV 213

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+  L+ G+ +  ++ +A SIFN M ++G +PD  + + LI+   K  M +EA  +++  
Sbjct: 214 TYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273

Query: 569 SEDQ 572
              Q
Sbjct: 274 HHKQ 277



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 1/297 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+ +++   C+ G     + V   M   G  P        +       + + A
Sbjct: 172 NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKA 231

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           K + +      V+     Y+ L+N   K    DEA+ + KE       P+  T++ LI G
Sbjct: 232 KSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDG 291

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G++  A +   +M   G  P+IVTY++++  LC+ ++V     LL ++K      P
Sbjct: 292 LCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMK-NQGIQP 350

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           ++ TYT +I G C+ GK++ A  ++ ++   G   +  T+ V+I GF   G    A  + 
Sbjct: 351 NMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLL 410

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +M   G +P+  T+  +I    +  +     KL  EM   N    V     LI ++
Sbjct: 411 SKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASI 467



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 59/124 (47%)

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           N ++DA     +L   +  P    +N ++    K+ +      +  +ME +  KP+ V  
Sbjct: 41  NDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 100

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            ILI   C  G +  A S+  K+L++G  P+ IT+N+LI  L   G  ++   I+ +  +
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160

Query: 571 DQNL 574
             +L
Sbjct: 161 AVDL 164


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 205/421 (48%), Gaps = 8/421 (1%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH---LPNSPMIEFFVSSCIRAG 205
            L+   S  +YN ++  L    + D +  ++  M +D      PN   +   ++S  + G
Sbjct: 144 QLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLG 203

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
               A+    +    E     F Y SL+    + ++ + A  +F     +  + +  ++ 
Sbjct: 204 NMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFC----VMPRRNAVSYT 259

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI GL   G++ +A EF+  M   GC P + TY  L+  LC          L  E++ +
Sbjct: 260 NLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER 319

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               P+V TYT +I   CK G+MD+A  + NEM   G+ PS V FN LI  + K G M  
Sbjct: 320 G-CEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   M S    P+V T++ LI G+CR   +++ + L ++M    LSP+V T+  LI+
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LC+   ++ A R  + +  +   P  + +N  +   C+ G V EA+ I+  ++EK  K 
Sbjct: 439 GLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKA 498

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           ++  +T LI G+C  G++  A S+F +ML   C P+ IT N +I  L K G   +A  ++
Sbjct: 499 NEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLV 558

Query: 566 Q 566
           +
Sbjct: 559 E 559



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 197/411 (47%), Gaps = 3/411 (0%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +Y  ++  LCE G LH++++  +  MR DG  P        V +   +G+   A  L  +
Sbjct: 257 SYTNLIHGLCEAGKLHEALEF-WARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGE 315

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R      + + Y  L++ L K+   DEA+ M  E       P    FN LI    + G 
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++ A      M S    P++ TYN LI G CR   + R   LL ++  +S+ SPDVVTY 
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKM-VESKLSPDVVTYN 434

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G C++G +D A+ ++  M   G  P   TFN  +    ++G +  A  + E +   
Sbjct: 435 TLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK 494

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
               +   +++LIDGYC+ G++     L   M  +   PN  TF ++I+ L KE ++ DA
Sbjct: 495 HVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDA 554

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              ++ +   D+ P    YN +++   K  + D AN I+  +     +P+ VT+T  I  
Sbjct: 555 MLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKA 614

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +C +GR+ EA  +  K+   G   D    N LI+     G+ + AF +++R
Sbjct: 615 YCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRR 665



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 221/475 (46%), Gaps = 13/475 (2%)

Query: 101 TLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYN 160
           T+L R  +  D   + L   L+P     +     +P   L F  + R + +  HS  T++
Sbjct: 31  TILSRPRWRKDPSLKTLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHH 90

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
            ++  L     H +++   +   S      SP    F+ + +R  + + A          
Sbjct: 91  SLLLLLVR---HRTLRAAENVRNSMIKSCTSPHDATFLLNLLR--RMNTAAAAADHQHQL 145

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEV 277
              +S   YN LL  L + +  DE + ++KE          P+  T N ++    ++G +
Sbjct: 146 AFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNM 205

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  FF  +      PD+ TY +L+ G CR ++V R   +   +  +     + V+YT+
Sbjct: 206 AVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR-----NAVSYTN 260

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C+ GK+ +A   +  M   G  P+  T+ VL+    + G  + A  +   M   G
Sbjct: 261 LIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERG 320

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ LID  C+ G++++ LK+ +EM  K ++P+V  F  LI + CK   + DA 
Sbjct: 321 CEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAV 380

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  ++   + P    YN +I GFC+  ++D A  ++ +M E +  PD VT+  LI G 
Sbjct: 381 GVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGL 440

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           C  G +  A  +F  M+R G +PD  T N+ + CL + G   EA +I++   E  
Sbjct: 441 CEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKH 495



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 191/399 (47%), Gaps = 1/399 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TY +++ +LCE G       +F  MR  G  PN       +    + G+ D A  +L
Sbjct: 289 TVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKML 348

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++     V  S   +N+L+ +  K+   ++AV +          P+  T+N LI G  R 
Sbjct: 349 NEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRG 408

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             + +A      M     SPD+VTYNTLI GLC V  V     L + +  +  FSPD  T
Sbjct: 409 KSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFR-LMIRDGFSPDQWT 467

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           + + +   C++G++ +A  I   +    +K +   +  LIDG+ K G +  A  + +RML
Sbjct: 468 FNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRML 527

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +   LP+ +TF+ +IDG  + G++   + L ++M   ++ P ++T+ IL+  + KE   +
Sbjct: 528 AEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFD 587

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L +L  +   P    Y   I  +C  G ++EA  +V +++ +    D   + +LI
Sbjct: 588 RANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLI 647

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
             +   G +  A  +  +M   GC P  +T + L+  L+
Sbjct: 648 NAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLV 686



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 218/488 (44%), Gaps = 66/488 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++  LC+ G  D    + + M   G  P+       + S  + G  + A G+L   
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V  +   YN L+    +  + D A+ +  +       PD  T+N LI GL  +G V
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVV 446

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  M   G SPD  T+N  +  LCR+  V   H++L+ +K K     +   YT+
Sbjct: 447 DSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK-HVKANEHAYTA 505

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG---------------- 381
           +I GYCK GK++ A  ++  M +    P+++TFNV+IDG  K G                
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565

Query: 382 --------NMVSAEYMRE-----------RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                   N++  E ++E           R++S GY P+VVT+++ I  YC  G+L +  
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAE 625

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY-----NP 477
           ++  ++K + +  + + + +LINA      L+ A   L+++      P    Y     + 
Sbjct: 626 EMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL 685

Query: 478 VIDGFCKAGN-------------VDEAN-----------VIVAEMEEKRCKPDKVTFTIL 513
           VI+   K G+             VD  +           V+  +M E  C P+  T++ L
Sbjct: 686 VIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKL 745

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           I G C  GR+  A S+++ M   G +P +I  NSL+S   K GM  EA  ++    E  +
Sbjct: 746 INGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSH 805

Query: 574 L-QLPSWK 580
           L  L S+K
Sbjct: 806 LAHLESYK 813



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 200/437 (45%), Gaps = 30/437 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LCE+G+ DS   +F  M  DG  P+      F+    R G+   A  +L   
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V  +   Y +L++   K    + A  +FK        P++ TFN++I GL + G+V
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKV 551

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A     DM  F   P + TYN L+  + +  +  R +E+L  +   S + P+VVTYT+
Sbjct: 552 QDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL-ISSGYQPNVVTYTA 610

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I  YC  G++++A  +  ++ + G+   +  +N+LI+ +G +G + SA  +  RM   G
Sbjct: 611 FIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTG 670

Query: 398 YLPDVVTFSSL-----IDGYCRNGQLNQGLK------------------------LCDEM 428
             P  +T+S L     I+ + + G    GL                         L ++M
Sbjct: 671 CEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKM 730

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                 PN+ T++ LIN LCK  RLN A      ++   + P   ++N ++   CK G  
Sbjct: 731 AECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMF 790

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  ++  M E        ++ +LI G   +    +A ++F  +LR G   D++    L
Sbjct: 791 GEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVL 850

Query: 549 ISCLLKGGMPNEAFRIM 565
           I  L K G  ++   ++
Sbjct: 851 IDGLAKTGYVDQCSELL 867



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 32/319 (10%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TYN+++  + +    D    + + + S G+ PN      F+ +    G+ + A+ ++
Sbjct: 569 TLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMV 628

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI------ 268
            + +   V + +F+YN L+NA       D A  + +  F    +P   T++IL+      
Sbjct: 629 IKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIE 688

Query: 269 ----QGLSRIG-------------EVKKAFEF------FYDMGSFGCSPDIVTYNTLISG 305
               +G + +G             ++    +F      F  M   GC P++ TY+ LI+G
Sbjct: 689 KHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLING 748

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           LC+V  +     L   ++ +   SP  + + S++S  CKLG   +A  + + M  C    
Sbjct: 749 LCKVGRLNVAFSLYHHMR-EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLA 807

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
              ++ +LI G  +  N   AE +   +L  GY  D V +  LIDG  + G ++Q  +L 
Sbjct: 808 HLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELL 867

Query: 426 DEMK--GKNLSPNVYTFTI 442
           + M+  G  L P  Y+  +
Sbjct: 868 NLMEKNGCRLHPETYSMLM 886



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TY+ ++  LC++G  +    ++ +MR  G  P+  +    +SSC + G    A  LL
Sbjct: 738 NLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLL 797

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                         Y  L+  L +Q N ++A  +F    R     D   + +LI GL++ 
Sbjct: 798 DSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKT 857

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           G V +  E    M   GC     TY+ L+  L R
Sbjct: 858 GYVDQCSELLNLMEKNGCRLHPETYSMLMQELNR 891


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 209/416 (50%), Gaps = 3/416 (0%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLS--LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           +I  L   +   + +E  R  LS   + +F TY LV+ SLC+ GL      +F  M + G
Sbjct: 50  LINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG 109

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
             PN  +    ++   R GK   A  L  +     +  +   YNSL++A  +     EA 
Sbjct: 110 ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEAT 169

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
             F +       PD  TF  LI  LS+ G+V++A++ F  M   G +P+IVTYN+L++GL
Sbjct: 170 RTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C  +++     L  EV  +     DV++Y ++I+GYC  GK ++A  ++ +M    + PS
Sbjct: 230 CLHHQMDHAVRLF-EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPS 288

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+ +L+    + G + +A+ +   M   G  P + T++ L+DG C+NG + + + +  
Sbjct: 289 ITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFR 348

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            +K     P++  ++ILI  + +  R   A     ++    LVP    YN +I+G CK G
Sbjct: 349 SLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEG 408

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            + EA  +  +MEE  C+ D+++F  +I G   + ++ +A+    +M     +P+D
Sbjct: 409 KLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPND 464



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 213/414 (51%), Gaps = 3/414 (0%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T + +++ +C E  + D++++ FD M   G   +  +  + +++  +  +   A  L  +
Sbjct: 11  TVSTLVKGMCFEGKVMDALEL-FDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRR 69

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 + + F Y  ++++L K   A + + MF+E   +   P+   ++ LI GL R+G+
Sbjct: 70  MLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGK 129

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A   F +M S G   +++TYN+LI   CR            ++       PDVVT+T
Sbjct: 130 LREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQM-VGEGILPDVVTFT 188

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I    K GK+ +A  I+  M   G  P+ VT+N L++G      M  A  + E M+  
Sbjct: 189 TLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVER 248

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   DV+++++LI+GYC +G+  + + L  +M+ + L+P++ T+TIL+ AL +  R+  A
Sbjct: 249 GIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTA 308

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +     ++     P    Y  ++DG CK G ++EA  +   ++  + KP    ++ILI G
Sbjct: 309 KELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGG 368

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                R   A+ IF+++  +G  P+ +T N +I+ L K G   EA R+  +  E
Sbjct: 369 MFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 181/352 (51%), Gaps = 6/352 (1%)

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S ++P  VT+ST     L+  +  +    +A+ +F +  R   Q D   +  LI  L + 
Sbjct: 3   SGYQPNLVTVST-----LVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKT 57

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            + ++A E    M S  CS +  TY  +I  LC+     +G ++ +E+       P+V+ 
Sbjct: 58  RQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREM-INMGICPNVIV 116

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+S+I+G C++GK+ +A  +++EM S GIK + +T+N LI    + G    A     +M+
Sbjct: 117 YSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMV 176

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G LPDVVTF++LID   + G++ +  K+ + M  +  +PN+ T+  L+N LC  ++++
Sbjct: 177 GEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMD 236

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A R  + +    +      YN +I+G+C +G  +EA  +  +M+ +   P   T+TIL+
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILL 296

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
                 GR+  A  +FN M   G +P   T   L+  L K G   EA  + +
Sbjct: 297 KALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFR 348



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 123/246 (50%)

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           KS + P++VT ++++ G C  GK+  A  ++++M   G +   + +  LI+   K     
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  +  RMLS     +  T+  +ID  C++G   +GLK+  EM    + PNV  ++ LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           N LC+  +L +A     ++    +      YN +I   C+ G   EA    ++M  +   
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD VTFT LI     KG++ EA  IF  M++ G AP+ +T NSL++ L      + A R+
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241

Query: 565 MQRASE 570
            +   E
Sbjct: 242 FEVMVE 247



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 1/260 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC     D    +F+ M   G   +       ++    +GK + A  L  + 
Sbjct: 221 TYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKM 280

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +  E+T S   Y  LL AL +      A  +F         P   T+ +L+ GL + G +
Sbjct: 281 QYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCI 340

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F  + S    P I  Y+ LI G+ +        E+  E+       P++VTY  
Sbjct: 341 EEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIP-TVGLVPNIVTYNI 399

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK GK+ +A  ++ +M   G +   ++FN +I GF +   +  A    +RM    
Sbjct: 400 MINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKN 459

Query: 398 YLPDVVTFSSLIDGYCRNGQ 417
           + P+      L++ Y  + Q
Sbjct: 460 FSPNDSVTLMLVNLYAADAQ 479


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 220/453 (48%), Gaps = 15/453 (3%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDY-- 181
           L SL  +KR        K +E S V       + T N+++   C  G     QVV  +  
Sbjct: 65  LISLVNVKRYPTAISLYKQMELSEVE----PDYFTLNIIINCFCHFG-----QVVLAFSG 115

Query: 182 ---MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
              +   G+ PN+  +   +      GK   A     +       +S   Y  L+N + K
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                 A+ + +   R   +P+   ++++I  L +   V +A++ + +M   G SPD+VT
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y+ L+SG C V ++ R  +LL E+  ++  +PD+ TYT ++   CK GK+ +A  +   M
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLEN-INPDIYTYTILVDALCKEGKVKEAENVLAVM 294

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
               +    V ++ L+DG+  V  + +A+ +   M   G  PDV  +S +I+G C+  ++
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV 354

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++ L L +E+  KN+ P+  T+T LI+ LCK  R++       ++      P    YN +
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNL 414

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           ID  CK G++D A  +  +M+++  +P+  TFTIL+ G C  GR+  A+  F  +L  G 
Sbjct: 415 IDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGY 474

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +  T   +I+ L K G+ +EA  +  R  ++
Sbjct: 475 CLNVRTYTVMINGLCKEGLLDEALALQSRMEDN 507



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 192/391 (49%), Gaps = 43/391 (10%)

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
           T  TF +N +L +LV       A+ ++K+      +PD +T NI+I      G+V  AF 
Sbjct: 55  TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
               +   G  P+ +T NTL+ GLC   +V E  R H+ +        F    ++Y  +I
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKV----LAQGFRLSGISYGILI 170

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +G CK+G+   A  +   +    I+P+ V ++++ID   K   +  A  +   M+  G  
Sbjct: 171 NGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGIS 230

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE--------- 450
           PDVVT+S L+ G+C  GQLN+ + L +EM  +N++P++YT+TIL++ALCKE         
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290

Query: 451 --------------------------NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
                                     N +N+A+R    +    + P    Y+ +I+G CK
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
              VDEA  +  E+ +K   PD VT+T LI   C  GR+     +F++ML  G  PD IT
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            N+LI  L K G  + A  +  +  +DQ ++
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKM-KDQAIR 440



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 197/414 (47%), Gaps = 38/414 (9%)

Query: 139 GLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           G   L FS V+  L   ++    T N +M+ LC  G         D + + G   +    
Sbjct: 107 GQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISY 166

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              ++   + G+  AA  LL +     +  +  +Y+ +++ L K    DEA  ++ E   
Sbjct: 167 GILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVG 226

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PD  T++IL+ G   +G++ +A +   +M     +PDI TY  L+  LC+  +V  
Sbjct: 227 KGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKE 286

Query: 315 -------------------------GHELLKEVK---------FKSEFSPDVVTYTSVIS 340
                                    G+ L+ EV           +   +PDV  Y+ +I+
Sbjct: 287 AENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMIN 346

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G CK+ ++D+A  ++ E++   + P  VT+  LID   K G +     + + ML  G  P
Sbjct: 347 GLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPP 406

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           DV+T+++LID  C+NG L++ + L ++MK + + PNVYTFTIL++ LCK  RL +A  F 
Sbjct: 407 DVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFF 466

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           + L           Y  +I+G CK G +DEA  + + ME+  C  D VTF I+I
Sbjct: 467 QDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMI 520



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 164/340 (48%), Gaps = 1/340 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y++++  LC+  L D    ++  M   G  P+       VS     G+ + A  LL++  
Sbjct: 201 YSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV 260

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    + Y  L++AL K+    EA  +     +     D   ++ L+ G   + EV 
Sbjct: 261 LENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVN 320

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   FY M   G +PD+  Y+ +I+GLC++  V     L +E+  K+   PD VTYTS+
Sbjct: 321 NAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKN-MVPDTVTYTSL 379

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I   CK G++     +++EM   G  P  +T+N LID   K G++  A  +  +M     
Sbjct: 380 IDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAI 439

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+V TF+ L+DG C+ G+L   L+   ++  K    NV T+T++IN LCKE  L++A  
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALA 499

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
              +++ N  +     +  +I  F      D+A  +V EM
Sbjct: 500 LQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 138/288 (47%), Gaps = 11/288 (3%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC--- 207
           ++N    TY +++ +LC+ G     + V   M     +     ++  V S +  G C   
Sbjct: 263 NINPDIYTYTILVDALCKEGKVKEAENVLAVM-----VKACVNLDVVVYSTLMDGYCLVN 317

Query: 208 --DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             + AK +        VT     Y+ ++N L K    DEA+ +F+E  +    PDT T+ 
Sbjct: 318 EVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYT 377

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            LI  L + G +   ++ F +M   G  PD++TYN LI  LC+   + R   L  ++K +
Sbjct: 378 SLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQ 437

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +   P+V T+T ++ G CK+G++  A   + ++ + G   +  T+ V+I+G  K G +  
Sbjct: 438 A-IRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDE 496

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           A  ++ RM   G + D VTF  +I  +    + ++  KL  EM  + L
Sbjct: 497 ALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 1/252 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   +N     Y+ +M   C +   ++ + VF  M   G  P+       ++   +  + 
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV 354

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  L  +     +   T  Y SL++ L K         +F E       PD  T+N L
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNL 414

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I  L + G + +A   F  M      P++ T+  L+ GLC+V  +    E  +++  K  
Sbjct: 415 IDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKG- 473

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           +  +V TYT +I+G CK G +D+A  + + M   G    AVTF ++I  F        AE
Sbjct: 474 YCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAE 533

Query: 388 YMRERMLSFGYL 399
            +   M++ G L
Sbjct: 534 KLVREMIARGLL 545



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 9/223 (4%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
           ++   + +      Y++++  LC++   D    +F+ +     +P++      +    ++
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386

Query: 205 GKC----DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           G+     D    +L + +P +V      YN+L++AL K  + D A+ +F +      +P+
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDV----ITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPN 442

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            +TF IL+ GL ++G +K A EFF D+ + G   ++ TY  +I+GLC+   +     L  
Sbjct: 443 VYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQS 502

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            ++     S D VT+  +I  +    + DKA  +  EM + G+
Sbjct: 503 RMEDNGCIS-DAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 208/450 (46%), Gaps = 48/450 (10%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-- 217
           N V+   C  G  D  + + + MR +G  PN       +S+  +AG+   A  + +    
Sbjct: 216 NTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQE 275

Query: 218 -------RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK-----EYFRLYSQPDTWTFN 265
                  RP +VT     ++ +L+   +    DEA  +        + R     + W   
Sbjct: 276 KWERGLPRPDQVT-----FDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRW--- 327

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
             + GL R G V +A E   +M   G  P+  TYN ++ GLC+  +     ++   VK  
Sbjct: 328 --LSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVK-S 384

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              +PDVVTYTS++  YC  G    A  I +EM   G  P++ T+NVL+    K G +  
Sbjct: 385 GVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITE 444

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM----------------- 428
           AE + ERM   GY  D  + + +IDG CRN +L+  + + D M                 
Sbjct: 445 AERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLS 504

Query: 429 ------KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                   K   P+  T++ L++ALCKE R ++A++ L ++   D+ P   +Y+  I G+
Sbjct: 505 LLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGY 564

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G    A  ++ +ME+K CKP   T+ +LI G   K    E + + ++M   G  P+ 
Sbjct: 565 CKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNV 624

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +T NSLI    + GM N+A  ++    +++
Sbjct: 625 MTYNSLIKSFCERGMVNKAMPLLDEMLQNE 654



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 184/380 (48%), Gaps = 32/380 (8%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +YN LL A +++   D    ++K+     + PD +T NIL+Q L   G ++ A   F  M
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176

Query: 288 G-----SFGC----------------------SPDIVTYNTLISGLCRVNEVARGHELLK 320
                 SFG                       + ++V  NT+++G CR  +V     L++
Sbjct: 177 PERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVE 236

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC---GI-KPSAVTFNVLIDG 376
            ++ +   +P+VVT+ + IS  CK G++  A  I+N+M      G+ +P  VTF+V++ G
Sbjct: 237 RMRDEG-LAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSG 295

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F + G +  A  + + M   G+L  V +++  + G  RNG + +  +L  EM  + + PN
Sbjct: 296 FCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPN 355

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            YT+ I+++ LCKE +  D R+    +K   + P    Y  ++  +C  GN   AN I+ 
Sbjct: 356 SYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILD 415

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM +K C P+  T+ +L+      GR+ EA  +  +M   G + D  + N +I  L +  
Sbjct: 416 EMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNN 475

Query: 557 MPNEAFRIMQRASEDQNLQL 576
             + A  I+     + +L L
Sbjct: 476 KLDMAMDIVDGMWNEGSLAL 495



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 189/432 (43%), Gaps = 23/432 (5%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++YN  +  L   G+    Q +   M  +G  PNS      V    + GK    + +   
Sbjct: 322 ESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDF 381

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            + G +T     Y SLL+A   + NA  A  +  E  +    P+++T+N+L+Q L + G 
Sbjct: 382 VKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGR 441

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS------- 329
           + +A      M   G S D  + N +I GLCR N++    +++  +  +   +       
Sbjct: 442 ITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYS 501

Query: 330 ---------------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
                          PD +TY++++S  CK G+ D+A     EM    I P +V ++  I
Sbjct: 502 FLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFI 561

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G+ K G    A  +   M   G  P   T++ LI G+      ++ LKL  EMKGK + 
Sbjct: 562 HGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGIC 621

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PNV T+  LI + C+   +N A   L ++  N++VP    +  +I  FCK  +   A  +
Sbjct: 622 PNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRV 681

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +     C   +V ++++       GR +EA++I   +L +  +        +I  L K
Sbjct: 682 F-DASLSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCK 740

Query: 555 GGMPNEAFRIMQ 566
               +   R+++
Sbjct: 741 VDEVDHGHRLLK 752



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 194/448 (43%), Gaps = 29/448 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G    V+ V D+++S    P+       + +    G   AA  +L + 
Sbjct: 358 TYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEM 417

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ++F YN LL +L K     EA  + +         DT + NI+I GL R  ++
Sbjct: 418 AQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKL 477

Query: 278 KKAFEF---FYDMGSFG--------------------CSPDIVTYNTLISGLCRVNEVAR 314
             A +     ++ GS                      C PD +TY+TL+S LC+      
Sbjct: 478 DMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDE 537

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             + L E+  K + SPD V Y + I GYCK GK   A  +  +M   G KPS  T+N+LI
Sbjct: 538 AKKKLLEMIGK-DISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLI 596

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            GF +  N      +   M   G  P+V+T++SLI  +C  G +N+ + L DEM    + 
Sbjct: 597 WGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIV 656

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PN+ +F +LI A CK +  + A+R       +    K  +Y+ +       G   EA  I
Sbjct: 657 PNITSFELLIKAFCKTSDFSAAQRVFDA-SLSTCGQKEVLYSLMCTQLSTYGRWLEAMNI 715

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +  + E R    +  +  +I G C    +     +   ++  G + D      +I  L +
Sbjct: 716 LETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSE 775

Query: 555 GGMPNE----AFRIMQRASEDQNLQLPS 578
            G        + ++M+ A  D  L  PS
Sbjct: 776 RGKKQHVDMLSQKMMEMAERDNGLAAPS 803



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 203/437 (46%), Gaps = 34/437 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS--DGHLPNSPMIEF--FVSSCIRAGKCDAAKGL 213
           T+N  + +LC+ G       +F+ M+   +  LP    + F   +S    AG  D A+ L
Sbjct: 249 TFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVL 308

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           +   R G        YN  L+ LV+     EA  + +E      QP+++T+NI++ GL +
Sbjct: 309 VDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCK 368

Query: 274 IG---EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
            G   +V+K  +F   + S   +PD+VTY +L+   C     A  + +L E+  K   +P
Sbjct: 369 EGKAFDVRKVEDF---VKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKG-CAP 424

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +  TY  ++    K G++ +A  +   M+  G      + N++IDG  +   +  A  + 
Sbjct: 425 NSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIV 484

Query: 391 ERMLS--------FGY---------------LPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           + M +         GY               LPD +T+S+L+   C+ G+ ++  K   E
Sbjct: 485 DGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLE 544

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M GK++SP+   +   I+  CK  + + A + L+ ++     P    YN +I GF +  N
Sbjct: 545 MIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHN 604

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            DE   +++EM+ K   P+ +T+  LI   C +G + +A+ + ++ML+    P+  +   
Sbjct: 605 SDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFEL 664

Query: 548 LISCLLKGGMPNEAFRI 564
           LI    K    + A R+
Sbjct: 665 LIKAFCKTSDFSAAQRV 681



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 19/153 (12%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK--PFMYNPVIDGFCKAGNVDEA 491
           +P+V+T  IL+ ALC   R+  ARR        D +P+   F +  +  G+C+AG   +A
Sbjct: 147 APDVFTRNILLQALCAAGRMELARRVF------DAMPERNEFSFGILARGYCRAGRSMDA 200

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++  M       + V    ++ G C +G++ EA  +  +M   G AP+ +T N+ IS 
Sbjct: 201 LGVLDSMPTM----NLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISA 256

Query: 552 LLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVP 584
           L K G   +A+RI     E        W++ +P
Sbjct: 257 LCKAGRVLDAYRIFNDMQE-------KWERGLP 282



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 2/204 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +TYNL++    E    D +  +   M+  G  PN       + S    G  + A  LL
Sbjct: 588 STRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLL 647

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +    E+  +   +  L+ A  K ++   A  +F        Q +   ++++   LS  
Sbjct: 648 DEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEV-LYSLMCTQLSTY 706

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G   +A      +     S     Y  +I GLC+V+EV  GH LLK +  K  +S D   
Sbjct: 707 GRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKG-YSFDPAA 765

Query: 335 YTSVISGYCKLGKMDKATGIYNEM 358
           +  VI    + GK      +  +M
Sbjct: 766 FMPVIDALSERGKKQHVDMLSQKM 789


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 170/328 (51%), Gaps = 1/328 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N L+  +++      A  +F E  R   QP   TFN L+ G+ +  ++  A      M 
Sbjct: 117 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 176

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G +PD+ TY   I GLC+   +    E+ +E+  +   +P+ V  T++I  +CK G +
Sbjct: 177 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG-LNPNTVVLTTLIDAHCKEGDV 235

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
                +  EM + G+K   V +N L++GF +V +M +A  + E M   G  PD VT+++L
Sbjct: 236 TAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL 295

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG C+ G+L+  +++  EM  + ++ +  T+T LI+ L K  R  DA R L ++    L
Sbjct: 296 IDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGL 355

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  VID FCK G+V      + EM+ K   P  VT+ +++ G C  G+M  A  
Sbjct: 356 QPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADM 415

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGG 556
           + N ML IG  P+DIT N L+    K G
Sbjct: 416 LLNAMLNIGVCPNDITYNILLDGHCKHG 443



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 162/332 (48%), Gaps = 1/332 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + +N++MR +   G   S + VFD M   G  P        +S   +A   + A  L   
Sbjct: 115 RQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGL 174

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +    + Y + +  L K     +A+ MF+E       P+T     LI    + G+
Sbjct: 175 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 234

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V    E  ++M + G   D+V YN L++G CRV ++   +++++E++ K    PD VTYT
Sbjct: 235 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR-KDGLKPDKVTYT 293

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G CK G++D A  +  EM+  G+    VT+  LI G  K G  V AE +   M+  
Sbjct: 294 TLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEA 353

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T++ +ID +C+NG +  G K   EM+ K  +P + T+ +++N  C   ++ +A
Sbjct: 354 GLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNA 413

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
              L  +    + P    YN ++DG CK G V
Sbjct: 414 DMLLNAMLNIGVCPNDITYNILLDGHCKHGKV 445



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 171/335 (51%), Gaps = 1/335 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P +      +   IR+GK  +A+ +  +     V  +   +N+L++ + K ++ + A  +
Sbjct: 112 PEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANAL 171

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                +    PD +T+   IQGL + G ++ A E F +M   G +P+ V   TLI   C+
Sbjct: 172 RGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCK 231

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             +V  G EL  E+  +     D+V Y ++++G+C++  M  A  I  EM   G+KP  V
Sbjct: 232 EGDVTAGLELRWEMATRG-VKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKV 290

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+  LIDG  K G + +A  M++ M   G   D VT+++LI G  + G+     ++  EM
Sbjct: 291 TYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEM 350

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
               L P+  T+T++I+A CK   +    + LK+++     P    YN V++GFC  G +
Sbjct: 351 MEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQM 410

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
             A++++  M      P+ +T+ IL+ GHC  G++
Sbjct: 411 KNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKV 445



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 144/296 (48%), Gaps = 1/296 (0%)

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           ++R+  V +A+ F+  +   G  P+   +N L+  + R  ++A    +  E+  +    P
Sbjct: 89  MNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEM-LRRGVQP 147

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
            VVT+ +++SG CK   ++ A  +   M   GI P   T+   I G  K G +  A  M 
Sbjct: 148 TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMF 207

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E M   G  P+ V  ++LID +C+ G +  GL+L  EM  + +  ++  +  L+N  C+ 
Sbjct: 208 EEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRV 267

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             +  A   +++++ + L P    Y  +IDG CK G +D A  +  EM ++    D VT+
Sbjct: 268 RDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTY 327

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           T LI G    GR V+A  I  +M+  G  PD+ T   +I    K G     F+ ++
Sbjct: 328 TALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLK 383



 Score = 39.3 bits (90), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 25/143 (17%)

Query: 115 RYLCE----KLSPLNS-----LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRS 165
           R LCE     L P N+     ++   +  + K G K L+  + N   N    TYN+VM  
Sbjct: 345 RILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQ-NKGKNPGIVTYNVVMNG 403

Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC------DAAKGLLSQFRP 219
            C +G   +  ++ + M + G  PN       +    + GK        +AKG++S F  
Sbjct: 404 FCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSAKGMVSDFG- 462

Query: 220 GEVTMSTFMYNSLLNALVKQNNA 242
                   +Y SL+N  VK+ +A
Sbjct: 463 --------VYTSLINEFVKKKSA 477


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 225/450 (50%), Gaps = 5/450 (1%)

Query: 121 LSPLNSLEVIKRLDNPKL-GLKFLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           ++P+   +VI+ L N K+ G     F ++       + + YN ++  L   G ++ V  +
Sbjct: 157 VTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL 216

Query: 179 FDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           ++ M ++GH  P++      +S+  + G+ D+A  LL++ +   +  +  +Y  +++   
Sbjct: 217 YNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFF 276

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K +N   A+ +F+E   +Y +PD +T+  LI+GL + G + +A+ F+++M   GC PD V
Sbjct: 277 KLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTV 336

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG-YCKLGKMDKATGIYN 356
             N +I+ L +   +  G +L +E+   S   P+VVTY ++I   +    ++ +    + 
Sbjct: 337 VMNNMINFLGKAGRLDDGLKLFEEMGV-SHCIPNVVTYNTIIKALFESKSRVSEVFSWFE 395

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M   GI PS  T+++LIDGF K   +  A  + E M   G+ P    + SLID   +  
Sbjct: 396 RMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 455

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           + +   +L  E+K    S +   + ++I  L K  RL+DA     ++      P  + YN
Sbjct: 456 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYN 515

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G  +A  +DEA   + +M+E  C PD  ++ I++ G    G    A+ +   M   
Sbjct: 516 ALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNS 575

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              PD ++ N+++S L   GM  EA  +M+
Sbjct: 576 TIKPDAVSYNTVLSALSHAGMFEEAAELMK 605



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 176/345 (51%), Gaps = 5/345 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           YNS++  L+ +   ++   ++ E     + QPDT T++ LI    ++G    A     +M
Sbjct: 197 YNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEM 256

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  P    Y  +IS   +++ V     L +E+++     PDV TYT +I G  K G+
Sbjct: 257 KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY-CRPDVFTYTELIRGLGKAGR 315

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D+A   Y+EM   G KP  V  N +I+  GK G +     + E M     +P+VVT+++
Sbjct: 316 IDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNT 375

Query: 408 LIDG-YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +I   +    ++++     + MKG  +SP+ +T++ILI+  CK NR+  A   L+++   
Sbjct: 376 IIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEK 435

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK-GRMVE 525
              P P  Y  +ID   KA   D A  +  E++E  C         ++I H  K GR+ +
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN-CGSSSARVYAVMIKHLGKAGRLDD 494

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           AI++F++M ++GC P+    N+L+S L +  M +EA   M++  E
Sbjct: 495 AINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQE 539



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 1/223 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++   C+    +   ++ + M   G  P        + +  +A + D A  L  + 
Sbjct: 408 TYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    + S  +Y  ++  L K    D+A+ +F E  +L   P+ + +N L+ GL+R   +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACML 527

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   GC PDI +YN +++GL +     R  E+L  +K  S   PD V+Y +
Sbjct: 528 DEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK-NSTIKPDAVSYNT 586

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           V+S     G  ++A  +  EMN+ G +   +T++ +++  GKV
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 70/157 (44%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S + Y ++++ L + G  D    +FD M   G  PN       +S   RA   D A   +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +          YN +LN L K      A+ M         +PD  ++N ++  LS  
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHA 594

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           G  ++A E   +M + G   D++TY++++  + +V++
Sbjct: 595 GMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 2/145 (1%)

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL-VPKPFMYNPVIDGFCKAGN 487
           K +N   +  T+  LI+ L    +  +  + ++++  + + V  P   + VI     A  
Sbjct: 115 KKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKM 174

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVN 546
           + +A  I  +++ ++C+P    +  +II    +G+  +   ++N+M   G C PD +T +
Sbjct: 175 IGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYS 234

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
           +LIS   K G  + A R++    E+
Sbjct: 235 ALISAFCKLGRQDSAIRLLNEMKEN 259


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 211/461 (45%), Gaps = 38/461 (8%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            LE  R   S+  S   YN ++  L +MG  D    VF+ M+ D   PN       +   
Sbjct: 330 LLERQRAKGSI-PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDML 387

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            RAGK D A  L    +   +  +    N +++ L K    DEA  MF+E       PD 
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447

Query: 262 WTFNILIQGLSRIGEVKKAFE-----------------------------------FFYD 286
            TF  LI GL ++G V  A++                                    + D
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M +  CSPD+   NT +  + +  E  +G  + +E+K +  F PD  +Y+ +I G  K G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAG 566

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
             ++   ++  M   G       +N++IDGF K G +  A  + E M + G+ P VVT+ 
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           S+IDG  +  +L++   L +E K K +  NV  ++ LI+   K  R+++A   L++L   
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            L P  + +N ++D   KA  ++EA V    M+E +C P++VT+ ILI G C   +  +A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              + +M + G  P  I+  ++IS L K G   EA  +  R
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 211/447 (47%), Gaps = 2/447 (0%)

Query: 120 KLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF 179
           K  P   + V++RL +    +++  +      L H  ++YN ++  +      D++  + 
Sbjct: 62  KPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQIL 121

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
             M   G  P+       V  C++A K      ++   R  +   +   Y +L+ A    
Sbjct: 122 GEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N++D  + +F++   L  +P    F  LI+G ++ G V  A     +M S     DIV Y
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N  I    +V +V    +   E++  +   PD VTYTS+I   CK  ++D+A  ++  + 
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIE-ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                P    +N +I G+G  G    A  + ER  + G +P V+ ++ ++    + G+++
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + LK+ +EMK K+ +PN+ T+ ILI+ LC+  +L+ A      ++   L P     N ++
Sbjct: 361 EALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK+  +DEA  +  EM+ K C PD++TF  LI G    GR+ +A  ++ KML   C 
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
            + I   SLI      G   +  +I +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYK 506



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 194/397 (48%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++  L ++G  D    V++ M       NS +    + +    G+ +    +    
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N+ ++ + K    ++   MF+E       PD  +++ILI GL + G  
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            + +E FY M   GC  D   YN +I G C+  +V + ++LL+E+K K  F P VVTY S
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGS 627

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+ ++D+A  ++ E  S  I+ + V ++ LIDGFGKVG +  A  + E ++  G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++ T++SL+D   +  ++N+ L     MK    +PN  T+ ILIN LCK  + N A 
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++   + P    Y  +I G  KAGN+ EA  +    +     PD   +  +I G 
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
               R ++A S+F +  R G    + T   L+  L K
Sbjct: 808 SNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 203/448 (45%), Gaps = 37/448 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+    D    +F+++  +  +P +      +     AGK D A  LL + 
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R      S   YN +L  L K    DEA+ +F+E  +  + P+  T+NILI  L R G++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKL 393

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AFE    M   G  P++ T N ++  LC+  ++     + +E+ +K   +PD +T+ S
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTPDEITFCS 452

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG------------------- 378
           +I G  K+G++D A  +Y +M     + +++ +  LI  F                    
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512

Query: 379 ----------------KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                           K G       M E + +  ++PD  ++S LI G  + G  N+  
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L   MK +    +   + I+I+  CK  ++N A + L+++K     P    Y  VIDG 
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K   +DEA ++  E + KR + + V ++ LI G    GR+ EA  I  ++++ G  P+ 
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
            T NSL+  L+K    NEA    Q   E
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKE 720



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 193/418 (46%), Gaps = 2/418 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           SL+     YN+ + S  ++G  D     F  + ++G  P+       +    +A + D A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +            T+ YN+++         DEA  + +      S P    +N ++  
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L ++G+V +A + F +M     +P++ TYN LI  LCR  ++    EL   ++ K+   P
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ-KAGLFP 410

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +V T   ++   CK  K+D+A  ++ EM+     P  +TF  LIDG GKVG +  A  + 
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E+ML      + + ++SLI  +  +G+   G K+  +M  +N SP++      ++ + K 
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
                 R   +++K    VP    Y+ +I G  KAG  +E   +   M+E+ C  D   +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            I+I G C  G++ +A  +  +M   G  P  +T  S+I  L K    +EA+ + + A
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 151/316 (47%), Gaps = 6/316 (1%)

Query: 267 LIQGLSRIGEVKKAFEFF--YDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +I  L R+ +V +A E+F  Y+  +     P+  +YN+L+  + R        ++L E+ 
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMS 125

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
               F P V T   ++ G  K  K+ +   +   M     +P+   +  LI  F  V + 
Sbjct: 126 VAG-FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHS 184

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                + ++M   GY P V  F++LI G+ + G+++  L L DEMK  +L  ++  + + 
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I++  K  +++ A +F  +++ N L P    Y  +I   CKA  +DEA  +   +E+ R 
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P    +  +I+G+   G+  EA S+  +    G  P  I  N +++CL K G  +EA +
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364

Query: 564 IMQRASEDQNLQLPSW 579
           + +   +D    L ++
Sbjct: 365 VFEEMKKDAAPNLSTY 380



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 5/279 (1%)

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           SF   P+ V     I  L R+ +V R  E  +  + ++E      +Y S++    +    
Sbjct: 60  SFKPQPEFV-----IGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNF 114

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D    I  EM+  G  PS  T   ++ G  K   +     + + M  F + P    +++L
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 174

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I  +      +  L L  +M+     P V+ FT LI    KE R++ A   L ++K + L
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                +YN  ID F K G VD A     E+E    KPD+VT+T +I   C   R+ EA+ 
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +F  + +    P     N++I      G  +EA+ +++R
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 4/163 (2%)

Query: 122 SPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDY 181
           S ++    + R+D   L L+ L    +   L  +  T+N ++ +L +    +   V F  
Sbjct: 662 SLIDGFGKVGRIDEAYLILEEL----MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M+     PN       ++   +  K + A     + +   +  ST  Y ++++ L K  N
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
             EA  +F  +      PD+  +N +I+GLS       AF  F
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 201/407 (49%), Gaps = 1/407 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  ++    F  M+ +G + N      FV +  + G    A  L +Q 
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   + ++ F Y  L++   K    D+A+ +  E  R     +  T+ +L+ GL +  +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +    M   G   + + Y TLI G        +   LL E+K K     D+  Y +
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG-LELDISLYGA 438

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C + K+D+A  +  +M+  G++P+ + +  ++D   K G +  A  M +++L  G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P+V+T+ +LIDG C+ G +++ +   ++M+   L PNV  +T L++ LCK   LN+A 
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    +     +Y  ++DG+ K GN+ +A  + A+M +   + D   +T  I G 
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C    M EA  +F++M+  G APD    N LIS   K G   EA  +
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 209/423 (49%), Gaps = 43/423 (10%)

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           + +++  +S     G  D A   +++ R   V  +T   N +L  L +    D +  + +
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVR 177

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
             F     P+ +TFNI+I  L + GE+ +A   F  M   GC PD+VT+N+LI G  +  
Sbjct: 178 RLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           E+    +L++E++ +S    DVVTY ++I+ +CK G+M+ A G +  M   G+  + VTF
Sbjct: 238 ELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF 296

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           +  +D F K G +  A  +  +M   G   +  T++ LIDG C+ G+L+  + L DEM  
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLK----------QLKWNDLVPKPFM------ 474
           + +  NV T+T+L++ LCKE ++ +A   L+          +L +  L+   FM      
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416

Query: 475 -------------------YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
                              Y  +I G C    +DEA  ++ +M+E   +P+ + +T ++ 
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQ 572
                G++ EAI++  K+L  G  P+ IT  +LI  L K G  +EA   F  M+    D 
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP 536

Query: 573 NLQ 575
           N+Q
Sbjct: 537 NVQ 539



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 185/376 (49%), Gaps = 1/376 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       +    + G+   A+ L S+ +          +NSL++   K    DE   +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            +E  R   + D  T+N LI    + G ++ A+ +F  M   G   ++VT++T +   C+
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              V    +L  +++ +   + +  TYT +I G CK G++D A  + +EM   G+  + V
Sbjct: 306 EGLVREAMKLFAQMRVRG-MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+ VL+DG  K   +  AE +   M   G   + + +++LI G+  N    + L L  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           K K L  ++  +  LI  LC  ++L++A+  L ++  + L P   +Y  ++D   K+G V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  ++ ++ +   +P+ +T+  LI G C  G + EAIS FNKM  +G  P+     +L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 549 ISCLLKGGMPNEAFRI 564
           +  L K G  NEA ++
Sbjct: 545 VDGLCKNGCLNEAVQL 560



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 193/419 (46%), Gaps = 2/419 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+V+  LC+ G     + +F  M+  G LP+       +    + G+ D  + L+ + 
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN+L+N   K    + A   F    R     +  TF+  +    + G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F  M   G + +  TY  LI G C+   +     LL E+  +     +VVTYT 
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM-VRQGVPLNVVTYTV 368

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK  K+ +A  +   M   G++ + + +  LI G     N   A  +   M + G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+  + +LI G C   +L++   L  +M    L PN   +T +++A  K  ++ +A 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++  +   P    Y  +IDG CKAG++DEA     +M +    P+   +T L+ G 
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           C  G + EA+ +FN+M+  G + D +   +L+   LK G  ++AF +  +   D  LQL
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI-DSGLQL 606



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 1/342 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G  D   V+ D M   G   N       V    +  K   A+ +L   
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM 389

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  +Y +L++      N+++A+ +  E      + D   +  LIQGL  + ++
Sbjct: 390 EKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKL 449

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G  P+ + Y T++    +  +V     +L+++   S F P+V+TY +
Sbjct: 450 DEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI-LDSGFQPNVITYCA 508

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G +D+A   +N+M   G+ P+   +  L+DG  K G +  A  +   M+  G
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D V +++L+DGY + G L+    L  +M    L  +++ +T  I+  C  N + +AR
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAR 628

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
               ++  + + P   +YN +I  + K GN++EA  +  EME
Sbjct: 629 EVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 1/245 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L      Y  +++ LC +   D  + +   M   G  PN  +    + +C ++GK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  +L +        +   Y +L++ L K  + DEA+  F +   L   P+   +  L+
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL + G + +A + F +M   G S D V Y  L+ G  +   +      LK     S  
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA-LKAKMIDSGL 604

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             D+  YT  ISG+C L  M +A  +++EM   GI P    +N LI  + K+GN+  A  
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAIS 664

Query: 389 MRERM 393
           +++ M
Sbjct: 665 LQDEM 669


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 209/427 (48%), Gaps = 38/427 (8%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VFD M  +G  PNS      ++     G+ D A  +L +     +  + + Y   + AL 
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
              + +EA+ +     +   +P+  T+  LI GLSR+G+++ A   ++ M   G  P+ V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 298 TYNTLISGLC-------------------------RVNEVARGHEL---------LKEVK 323
           TYN LI+ LC                           NE+ +G  L         L E  
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    P VVTY ++I+GY   G ++ A  + + M   G +P   T+N L+ GF K G +
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            SA +  + M+  G  P+ V++++LIDG+ ++G+++  L L   M+    +PNV ++  +
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           IN L KENR ++A +   ++    L+P    Y  +IDG C+ G    A  I  +ME+++C
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P+  T++ LI G C +G+  EA     +M  IGC P   T ++L+S L + G   EA +
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 670

Query: 564 IMQRASE 570
           +++   E
Sbjct: 671 LVKDMKE 677



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 211/447 (47%), Gaps = 36/447 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  + N ++  L +  + +  + ++  M + G  P+       ++   + GK   A+ +L
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           SQ    +++   F Y SL+    +  N D A  +F    +    P++ T++ LI GL   
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V +A +   +M   G  P + TY   I+ LC +       EL+  +K K    P+V T
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK-KRGCRPNVQT 340

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI-------------------D 375
           YT++ISG  +LGK++ A G+Y++M   G+ P+ VT+N LI                   +
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400

Query: 376 GFGKV----------------GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           G G +                G++  A  + E+ML  G LP VVT+++LI+GY   G +N
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
              +L D MK     P+ +T+  L++   K  +L  A  + +++    L P P  Y  +I
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG  K G VD A  ++  MEE  C P+  ++  +I G   + R  EA  I +KM+  G  
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
           P+ IT  +LI  L + G    AF+I  
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFH 607



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 216/490 (44%), Gaps = 76/490 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY L + +LC +   +    +   M+  G  PN       +S   R GK + A GL  + 
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +T  YN+L+N L        A+ +F       S  +T T+N +I+GL   G++
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVT 334
           +KA   F  M   G  P +VTYNTLI+G      VN  AR  +L+KE    +   PD  T
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE----NGCEPDEWT 480

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM----------- 383
           Y  ++SG+ K GK++ A+  + EM  CG+ P+ V++  LIDG  K G +           
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540

Query: 384 ------------------------VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                                     AE + ++M+  G LP+V+T+++LIDG CRNG+  
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600

Query: 420 QGLKLCDEMKGKNLSPNVYTFT-------------------------------ILINALC 448
              K+  +M+ +   PN+YT++                                L++ LC
Sbjct: 601 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLC 660

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           ++ R  +A + +K +K     P   +Y  ++   CK   VD A  I   +E K  +    
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIM 565
            +  LI   C  G++ EA ++F+ ML      D+I    L+  LLK G   +  +   IM
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780

Query: 566 QRASEDQNLQ 575
           +  +   N+Q
Sbjct: 781 ESKNFTPNIQ 790



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 1/310 (0%)

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           ++ N L+  L++   V+ A   +  M + G  P ++T+NTLI+ L +  +V     +L +
Sbjct: 164 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 223

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F+ + SPDV TYTS+I G+C+   +D A G+++ M   G  P++VT++ LI+G    G
Sbjct: 224 I-FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEG 282

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  M E M+  G  P V T++  I   C      + ++L   MK +   PNV T+T
Sbjct: 283 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+ L +  +L  A     ++    LVP    YN +I+  C  G    A  I   ME  
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGH 402

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               +  T+  +I G C+ G + +A+ +F KML++G  P  +T N+LI+  L  G  N A
Sbjct: 403 GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNA 462

Query: 562 FRIMQRASED 571
            R++    E+
Sbjct: 463 ARLLDLMKEN 472



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 183/408 (44%), Gaps = 32/408 (7%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN +++ LC  G  +   V+F+ M   G LP        ++  +  G  + A  LL  
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +        + YN L++   K    + A + F+E       P+  ++  LI G S+ G+
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A      M   GC+P++ +YN +I+GL + N  +   ++  ++  +    P+V+TYT
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM-VEQGLLPNVITYT 587

Query: 337 SVISGYCKLGKMDKATGIYNEM-------------------------------NSCGIKP 365
           ++I G C+ G+   A  I+++M                               +  G +P
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEP 647

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +  T++ L+ G  + G    AE + + M   G+ PD   + SL+  +C+N +++  LK+ 
Sbjct: 648 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 707

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
             ++ K    ++  +  LI ALCK  ++ +A+     +   +      ++  ++DG  K 
Sbjct: 708 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKE 767

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           G +D    ++  ME K   P+  T+ IL       G+ +E+  + +K+
Sbjct: 768 GELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 139/256 (54%), Gaps = 1/256 (0%)

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           E+ R  + L E+     F   + +  +++    K   ++ A  +Y +M + GI+PS +TF
Sbjct: 143 EIRRVADFLNEISGMG-FGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N LI+   K G +  AE +  ++  +   PDV T++SLI G+CRN  L+    + D M  
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           +   PN  T++ LIN LC E R+++A   L+++    + P  + Y   I   C   + +E
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEE 321

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +VA M+++ C+P+  T+T LI G    G++  AI +++KML+ G  P+ +T N+LI+
Sbjct: 322 AIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALIN 381

Query: 551 CLLKGGMPNEAFRIMQ 566
            L  GG  + A +I  
Sbjct: 382 ELCVGGRFSTALKIFH 397



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 149/338 (44%), Gaps = 32/338 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  +S    F  M   G  PN       +    + GK D A  LL + 
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+++N L K+N   EA  +  +       P+  T+  LI GL R G  
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 278 KKAFEFFYDM-------------------------------GSFGCSPDIVTYNTLISGL 306
           + AF+ F+DM                                  GC P + TY+TL+SGL
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGL 659

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           CR        +L+K++K +  F PD   Y S++  +CK  ++D A  I++ + + G +  
Sbjct: 660 CRKGRFYEAEQLVKDMKERG-FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLH 718

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
              +  LI    K G +  A+ + + ML   +  D + ++ L+DG  + G+L+  +KL  
Sbjct: 719 LSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLH 778

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
            M+ KN +PN+ T+ IL   L +  +  ++     +LK
Sbjct: 779 IMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 413 CRNGQ-LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           CRN + + +     +E+ G     ++Y+   L+  L K   +  AR   KQ+  + + P 
Sbjct: 138 CRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPS 197

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +N +I+   K G V EA +I++++ +    PD  T+T LI+GHC    +  A  +F+
Sbjct: 198 LLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFD 257

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +M++ GC P+ +T ++LI+ L   G  +EA  +++   E
Sbjct: 258 RMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIE 296


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 201/410 (49%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+  L   G       VFD M   G +PN       +   ++ G  +A   L  Q 
Sbjct: 18  SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM 77

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN LL+ L +    DE   +  E       PD +T++IL  GL+R GE 
Sbjct: 78  LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 137

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +     F +    G      T + L++GLC+  +VA+  ++L E+   +   P  V Y +
Sbjct: 138 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL-EMLVHTGLVPTTVIYNT 196

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYC++  +  A  I+ +M S  I+P  +T+N LI+G  K+  +  AE +   M   G
Sbjct: 197 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 256

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V TF++LID Y   GQL +   +  +M+ K +  +V +F  ++ A CK  ++ +A 
Sbjct: 257 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 316

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  + + D+ P   +YN +ID + ++G+ ++A ++V +M+        VT+ +L+ G 
Sbjct: 317 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 376

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   ++ EA  +   +   G  PD ++ N++IS     G  ++A  ++Q 
Sbjct: 377 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 205/409 (50%), Gaps = 1/409 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ +  ++ TYN ++    + G  ++   + D M  DG  PN       +S   RAG+ 
Sbjct: 43  VDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRM 102

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D  + L+ +     +    F Y+ L + L +   +   + +F E  +       +T +IL
Sbjct: 103 DETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSIL 162

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G+V KA +    +   G  P  V YNTLI+G C+V ++     + +++K +  
Sbjct: 163 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR-H 221

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD +TY ++I+G CKL  + KA  +  EM   G+ PS  TFN LID +G  G +    
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 281

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M   G   DV++F S++  +C+NG++ + + + D+M  K+++PN   +  +I+A 
Sbjct: 282 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 341

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            +      A   ++++K + +      YN ++ G C++  +DEA  ++  +  +  +PD 
Sbjct: 342 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 401

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           V++  +I   C KG   +A+ +  +M + G  P   T ++L+S L   G
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 450



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 189/398 (47%), Gaps = 5/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  D  +V+ D M S    P+            R G+      L ++ 
Sbjct: 88  TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 147

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +  +  + LLN L K     +A  + +        P T  +N LI G  ++ ++
Sbjct: 148 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 207

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF  F  M S    PD +TYN LI+GLC++  V +  +L+ E++ KS   P V T+ +
Sbjct: 208 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME-KSGVDPSVETFNT 266

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y   G+++K   + ++M   GIK   ++F  ++  F K G +  A  + + M+   
Sbjct: 267 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 326

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+   ++S+ID Y  +G   Q   L ++MK   +S ++ T+ +L+  LC+ +++++A 
Sbjct: 327 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 386

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  L+   L P    YN +I   C  G+ D+A  ++ EM +   +P   T+  L+   
Sbjct: 387 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 446

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDD----ITVNSLISC 551
              GR+ +   ++ +ML     P      I V++ + C
Sbjct: 447 ASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 484



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 180/342 (52%), Gaps = 1/342 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            F YN ++  L +     +A+ +F E   +   P+  T+N +I G  + G+++  F    
Sbjct: 16  AFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRD 75

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M   G  P+IVTYN L+SGLCR   +     L+ E+   S F PD  TY+ +  G  + 
Sbjct: 76  QMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMF-PDGFTYSILFDGLTRT 134

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G+      ++ E    G+   A T ++L++G  K G +  AE + E ++  G +P  V +
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           ++LI+GYC+   L     + ++MK +++ P+  T+  LIN LCK   +  A   + +++ 
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           + + P    +N +ID +  AG +++   ++++M++K  K D ++F  ++   C  G++ E
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           A++I + M+    AP+    NS+I   ++ G   +AF ++++
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 356



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 35/271 (12%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD  +Y  VI+G  + GK   A  +++EM   G+ P+ +T+N +IDG  K G++ +   +
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN------------- 436
           R++ML  G  P++VT++ L+ G CR G++++   L DEM   ++ P+             
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 437 ----------------------VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
                                  YT +IL+N LCK+ ++  A + L+ L    LVP   +
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +I+G+C+  ++  A  I  +M+ +  +PD +T+  LI G C    + +A  +  +M 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + G  P   T N+LI      G   + F ++
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVL 284



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 35/202 (17%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P A ++NV+I G  + G    A  + + M+  G +P+ +T++++IDG+ + G L  G +L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            D+M      PN+ T                                   YN ++ G C+
Sbjct: 74  RDQMLHDGPKPNIVT-----------------------------------YNVLLSGLCR 98

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           AG +DE  V++ EM      PD  T++IL  G    G     +S+F + L+ G      T
Sbjct: 99  AGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYT 158

Query: 545 VNSLISCLLKGGMPNEAFRIMQ 566
            + L++ L K G   +A ++++
Sbjct: 159 CSILLNGLCKDGKVAKAEQVLE 180



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/147 (20%), Positives = 61/147 (41%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  ++ S  TYNL+++ LC     D  + +   +R+ G  P+       +S+C   G  D
Sbjct: 359 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 418

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  LL +     +  +   Y++L++AL       +   ++++      +P +  + I++
Sbjct: 419 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 478

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPD 295
               R     K      +M   G + D
Sbjct: 479 DAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 31/169 (18%), Positives = 70/169 (41%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + YN ++ +  E G  +   ++ + M++ G   +       +    R+ + D A+ L+  
Sbjct: 332 QVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 391

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   +      YN++++A   + + D+A+ + +E  +   +P   T++ L+  L+  G 
Sbjct: 392 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 451

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           V      +  M      P    Y  ++    R    ++   L KE+  K
Sbjct: 452 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 500



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 38/67 (56%)

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD  ++ ++I G    G+  +A+ +F++M+ +G  P+ IT N++I   +KGG     FR+
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 565 MQRASED 571
             +   D
Sbjct: 74  RDQMLHD 80


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 205/437 (46%), Gaps = 36/437 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +  TY +++  LC++G       V+  M ++ H  ++      +    R+G  D+A  + 
Sbjct: 263 NLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVY 322

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      + +   +YNSL+    +     EA + F +           T+NI+ +GL   
Sbjct: 323 SDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA-WKFWDSTGFSGIRQITTYNIMTKGLLDS 381

Query: 275 GEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE----FS 329
           G V +A E    +     CSPD VT+ TLI GLC      R  E+L++ +   E    FS
Sbjct: 382 GMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFS 441

Query: 330 ------------------------------PDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
                                         P+   Y ++I+G+C++ K++ A  IY EM 
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMT 501

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           S G  P+ +T+N LIDG  K      A  + + ML  G+ PD+ T++SLI G CR+ +++
Sbjct: 502 SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             L++ DE+    L  +V    ILI+ LC   ++++A     ++K  +  P    YN ++
Sbjct: 562 VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM 621

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DGF + G++D+A  +   + +   KPD VT+   I G C   R  E + + N++L  G  
Sbjct: 622 DGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIM 681

Query: 540 PDDITVNSLISCLLKGG 556
           P  IT + L+  ++K G
Sbjct: 682 PTVITWSILVRAVIKYG 698



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 4/412 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TYN+++RSLC  G  D    +F  +R  G  P+       +S   +  + D A  LL
Sbjct: 157 NLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLL 216

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSR 273
            +     V      YN+LL+   +    ++A+ ++++  R   + P+  T+ +++ GL +
Sbjct: 217 DEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCK 276

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G  K+A E +  M +     D VTY  LI GLCR  +V     +  ++  K+    DV 
Sbjct: 277 LGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDM-VKAGLVLDVS 335

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRER 392
            Y S+I G+C++G+  +A   ++     GI+    T+N++  G    G +  A E +++ 
Sbjct: 336 VYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQL 394

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
                  PD VTF +LI G C NG  N+  ++ ++ +      +V++++ +IN  CK+ R
Sbjct: 395 ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGR 454

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            +DA    K +  +   P   +YN +I+GFC+   +++A  I  EM    C P  +T+  
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           LI G C   +  EA S+  +ML  G  PD  T  SLI  L +    + A RI
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRI 566



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 8/349 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEY----FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +N+LL+A V+     +A   F       F     P+  T+NI+++ L   G+V +A   F
Sbjct: 122 HNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLF 181

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G +PD VTY+TL+SGL + +++    +LL E+        D V Y +++SG  +
Sbjct: 182 SSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMP-NYGVQADAVCYNALLSGCFR 240

Query: 345 LGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
            G  +KA  ++ ++    G  P+  T+ V++DG  K+G    A  +  RM++  +  D V
Sbjct: 241 TGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTV 300

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+  LI G CR+G ++   ++  +M    L  +V  +  LI   C+  R  +A +F    
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST 360

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-EKRCKPDKVTFTILIIGHCMKGR 522
            ++  + +   YN +  G   +G V EA  ++ ++E +  C PDKVTF  LI G C  G 
Sbjct: 361 GFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGY 419

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
              A  I       G   D  + +S+I+   K G  ++A  + +   +D
Sbjct: 420 ANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 157/332 (47%), Gaps = 2/332 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN++ + L + G+      +   + +D    P+       +      G  + A  +L  
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R     +  F Y+S++N   K     +A  ++K   +   +P++  +N LI G  R+ +
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A + + +M S GC P I+TYNTLI GLC+  +      L KE+  +  F PD+ TY 
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEM-LERGFKPDIRTYA 548

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I G C+  K+D A  I++E+   G++   +  N+LI G    G +  A  +   M   
Sbjct: 549 SLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEK 608

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P++VT+++L+DG+   G +++   L   +    L P++ T+   I  LC  NR  + 
Sbjct: 609 NCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEG 668

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
              L ++    ++P    ++ ++    K G +
Sbjct: 669 VLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 153/343 (44%), Gaps = 40/343 (11%)

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSF-GCSPDIVTYNTLISGLCRVNEVARGHEL---LKE 321
           +++   SR      A   F D+ S  GC+P + ++NTL+    R    +        L  
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSH 147

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
             F    +P++ TY  ++   C  G +D+A  +++ +   G+ P  VT++ L+ G  K  
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTF 440
            + +A  + + M ++G   D V +++L+ G  R G   + +K+ +++ +    SPN+ T+
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATY 267

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            ++++ LCK  R  +A     ++  N+       Y  +I G C++G+VD A  + ++M +
Sbjct: 268 KVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEA--------------ISIFNKMLR----------- 535
                D   +  LI G C  GR  EA              I+ +N M +           
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEA 387

Query: 536 ----------IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
                       C+PD +T  +LI  L + G  N AF I++ A
Sbjct: 388 TELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDA 430



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 36/193 (18%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            +TY  ++R LC                                   R  K D A  +  
Sbjct: 544 IRTYASLIRGLC-----------------------------------RDKKVDVALRIWD 568

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     + +   ++N L++ L      DEA  ++ E       P+  T+N L+ G   IG
Sbjct: 569 EILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIG 628

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + KA   +  +   G  PDIVTYNT I GLC  N    G  LL EV   +   P V+T+
Sbjct: 629 SIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEV-LATGIMPTVITW 687

Query: 336 TSVISGYCKLGKM 348
           + ++    K G +
Sbjct: 688 SILVRAVIKYGPI 700


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 188/345 (54%), Gaps = 6/345 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+      SL+N   ++N   +AV +  +   +  +PD   +N +I  L +   
Sbjct: 151 YEPDRVTIG-----SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  AF+FF ++   G  P++VTY  L++GLC  +  +    LL ++  K + +P+V+TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYS 264

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++  + K GK+ +A  ++ EM    I P  VT++ LI+G      +  A  M + M+S 
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G L DVV++++LI+G+C+  ++  G+KL  EM  + L  N  T+  LI    +   ++ A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           + F  Q+ +  + P  + YN ++ G C  G +++A VI  +M+++    D VT+T +I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C  G++ EA S+F  +   G  PD +T  +++S L   G+ +E 
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 199/399 (49%), Gaps = 6/399 (1%)

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMS 225
           ++ L+D++ +  D ++S    P   +++F   +S+ ++  K D    L  +     +   
Sbjct: 63  DIKLNDAIDLFSDMVKSR---PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            + +N ++N          A+ +  +  +L  +PD  T   L+ G  R   V  A     
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M   G  PDIV YN +I  LC+   V    +  KE++ K    P+VVTYT++++G C  
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNS 238

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            +   A  + ++M    I P+ +T++ L+D F K G ++ A+ + E M+     PD+VT+
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           SSLI+G C + ++++  ++ D M  K    +V ++  LIN  CK  R+ D  +  +++  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             LV     YN +I GF +AG+VD+A    ++M+     PD  T+ IL+ G C  G + +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           A+ IF  M +     D +T  ++I  + K G   EA+ +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 190/397 (47%), Gaps = 1/397 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L + +   T+N+V+   C          +   M   G+ P+   I   V+   R  +   
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  L+ +            YN+++++L K    ++A   FKE  R   +P+  T+  L+ 
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL        A     DM     +P+++TY+ L+    +  +V    EL +E+  +    
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSID 292

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD+VTY+S+I+G C   ++D+A  +++ M S G     V++N LI+GF K   +     +
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G + + VT+++LI G+ + G +++  +   +M    +SP+++T+ IL+  LC 
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L  A    + ++  ++      Y  VI G CK G V+EA  +   +  K  KPD VT
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           +T ++ G C KG + E  +++ KM + G   +D T++
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 3/301 (0%)

Query: 272 SRIGEVK--KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           +R+ ++K   A + F DM      P IV +N L+S + ++ +      L K+++      
Sbjct: 59  TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG-IR 117

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            D+ T+  VI+ +C   ++  A  I  +M   G +P  VT   L++GF +   +  A  +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M+  GY PD+V ++++ID  C+  ++N       E++ K + PNV T+T L+N LC 
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +R +DA R L  +    + P    Y+ ++D F K G V EA  +  EM      PD VT
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           ++ LI G C+  R+ EA  +F+ M+  GC  D ++ N+LI+   K     +  ++ +  S
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 570 E 570
           +
Sbjct: 358 Q 358


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 189/362 (52%), Gaps = 1/362 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           ++G+   A+ LL +     V ++   YNSLL+A  ++ + D    M K       +P   
Sbjct: 155 KSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVG 214

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL+ GLS   ++ K    F +M S   S D+  Y+++I+  CR   V R  E+  E 
Sbjct: 215 TYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDEC 274

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
              +   P+  TY ++I+G+CK+G+M+ A  +  +M   G+  + + FN +IDG+ +   
Sbjct: 275 -VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNM 333

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  ++  M   G   DV T+++L  G  R  ++++   L   M  K + PN  ++T 
Sbjct: 334 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTT 393

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+  C E  + +ARR  +++  N   P    YN ++DG+ K G++ EA     EME+K 
Sbjct: 394 LISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKG 453

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD  ++  L+ GHC+ G++  A+ +F +M + G  P+ +   +LIS L K G   EAF
Sbjct: 454 LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 513

Query: 563 RI 564
           ++
Sbjct: 514 QL 515



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 156/346 (45%), Gaps = 38/346 (10%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           D  K+   F E    NLS +  F  Y+ V+ + C  G       VFD    +G  PN   
Sbjct: 228 DITKVEAVFEEMKSKNLSGDVYF--YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHT 285

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               ++   + G+ +AA+ L++  +   V ++  ++N++++   ++N  D+A+ +     
Sbjct: 286 YGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIME 345

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           ++  + D +T+N L  GL R   + +A      M   G  P+ V+Y TLIS  C   ++ 
Sbjct: 346 KMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMV 405

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               L +E+       P +VTY  ++ GY K G + +A     EM   G+          
Sbjct: 406 EARRLFREMAGNGA-EPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGL---------- 454

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
                                    +PD+ ++++L+ G+C NG+++  L+L +EMK +  
Sbjct: 455 -------------------------VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            PN+  +T LI+ L KE R  +A +    +  + L P   +Y+ ++
Sbjct: 490 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 177/340 (52%), Gaps = 1/340 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            + YN++++   K N  D A  +F         PD  T+NI+I  L   G+++ AFE   
Sbjct: 131 VYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMD 190

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           ++   GC P ++TY  LI        +    EL  E+  +    PD+ TY ++I G CK 
Sbjct: 191 ELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRG-LRPDLYTYNAIIRGICKE 249

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G  D+A      +++ G  P  V++N+L+  F         E + + M+  G  P+VVT 
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S LI  +CR G++ + + + + MK K L+P+ Y++  LI+A CKE RL+ A  +L+++  
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           +  +P    YN ++   CK G  D A  +  +++E  C P    +  +       G  ++
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           A+ + ++M+R G  PD+IT NSLISCL + G+ +EA  ++
Sbjct: 430 ALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLL 469



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 204/408 (50%), Gaps = 3/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++    +    DS   VFD MRS G  P+       + S    GK + A  ++ + 
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL 192

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   Y  L+ A + +   +EA+ +F E      +PD +T+N +I+G+ + G  
Sbjct: 193 LKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGME 252

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +F   + + GC+PD+V+YN L+      +    G  L+K++   S   P+VVT++ 
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVL-SGCEPNVVTHSI 311

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-VSAEYMRERMLSF 396
           +IS +C+ G++ +A  +   M   G+ P + +++ LI  F K G + ++ EY+ E+M+S 
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYL-EKMVSD 370

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G LPD+V +++++   C+ G  +  L + +++      P V  +  + +AL        A
Sbjct: 371 GCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKA 430

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              + ++    + P    YN +I   C+ G VDEA  ++ +ME  R +P  ++F I+++G
Sbjct: 431 LEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLG 490

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            C   R+ E I +   M+  GC P++ +   LI  +   G   EA  +
Sbjct: 491 MCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 175/339 (51%), Gaps = 2/339 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           LLN   +    +E++Y  +       +PD      LI+G      +KKA      + ++G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             PD+ +YN +ISG  + N++   +++   ++ +  FSPDVVTY  +I   C  GK++ A
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRG-FSPDVVTYNIMIGSLCSRGKLELA 185

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             + +E+   G KPS +T+ +LI+     G +  A  + + ++S G  PD+ T++++I G
Sbjct: 186 FEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRG 245

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G  ++ L     +  +  +P+V ++ IL+ +   ++R  D  R +K +  +   P 
Sbjct: 246 ICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPN 305

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              ++ +I  FC+ G V EA  ++  M+EK   PD  ++  LI   C +GR+  AI    
Sbjct: 306 VVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           KM+  GC PD +  N++++ L K G  + A  + ++  E
Sbjct: 366 KMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDE 404



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 2/299 (0%)

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R G+  ++  F   + S G  PD+V    LI G      + +   +++ ++   +  PDV
Sbjct: 74  RAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGD--PDV 131

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            +Y ++ISG+ K  ++D A  +++ M S G  P  VT+N++I      G +  A  + + 
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           +L  G  P V+T++ LI+     G++N+ L+L DE+  + L P++YT+  +I  +CKE  
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            + A  F++ L      P    YN ++  F      ++   ++ +M    C+P+ VT +I
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           LI   C +GR+ EA+++   M   G  PD  + + LIS   K G  + A   +++   D
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSD 370


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 180/350 (51%), Gaps = 6/350 (1%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   +++F   ++S  R         L  Q     +  +T+  N L+N+    N    A 
Sbjct: 6   PPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAF 65

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +  +L  QP T TF  LI+GL   G++ +A + F  M   G  PD++TY TLI+GL
Sbjct: 66  SVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGL 125

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+  ++     L  ++  K   SP+  TY+S+I G C LG   +A  ++  M    I P 
Sbjct: 126 CKDRQLTEALSLFSDMLAKG-ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 184

Query: 367 AVTFNVLIDGF---GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            +TFN L+D     G +  M  A  + E M   G +PD VT+++LI G C  G+L   + 
Sbjct: 185 QLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 244

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM      P++ T+ IL + LCK +RL +A   LK ++  +L P   +Y+ V+DG C
Sbjct: 245 LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC 304

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           +AG ++ A  + +++  K   PD  T+TI+I G C +G + EA  +F +M
Sbjct: 305 RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 173/346 (50%), Gaps = 4/346 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           ++ LL ++ +  +    + ++K+        +T+T NILI     +  +  AF    D+ 
Sbjct: 13  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 72

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P   T+ TLI GLC   ++    +L  ++  +  F PDV+TY ++I+G CK  ++
Sbjct: 73  KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG-FQPDVLTYGTLINGLCKDRQL 131

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  ++++M + GI P+  T++ LI G   +G+   A  +   M+    +PD +TF++L
Sbjct: 132 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 191

Query: 409 IDGYCRNGQ---LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +D  C+ G    +++ + L +EM  + L P+  T+  LI+ LC   RL DA     ++  
Sbjct: 192 VDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV 251

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
              +P    Y  + D  CK   + EA V++  +E     PD   ++I++ G C  G +  
Sbjct: 252 YGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEA 311

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           A  +F+K+   G  PD  T   +I+ L + G+  EA ++     E+
Sbjct: 312 ARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN 357



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 155/319 (48%), Gaps = 6/319 (1%)

Query: 154 HSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           H+  T N+++ S C +  L  +  V+ D ++  G+ P++      +      GK   A  
Sbjct: 43  HNTYTLNILINSFCHLNRLGFAFSVLGDILKL-GYQPSTATFTTLIRGLCVEGKIGEALQ 101

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L  +            Y +L+N L K     EA+ +F +       P+ +T++ LI GL 
Sbjct: 102 LFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 161

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFS 329
            +G  K+A   FY M      PD +T+NTL+  LC+   +  + +   L +E+  +    
Sbjct: 162 ILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMS-QQGLI 220

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD VTY ++I G C +G++  A  +++EM   G  P  VT+ +L D   K   +  A  +
Sbjct: 221 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 280

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + +      PD+  +S ++DG CR G+L     L  ++  K L P+V T+TI+IN LC+
Sbjct: 281 LKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQ 340

Query: 450 ENRLNDARRFLKQLKWNDL 468
           +  L +A +   ++  ND+
Sbjct: 341 QGLLAEASKLFGEMDENDI 359



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 123/241 (51%), Gaps = 3/241 (1%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P +V ++ +++   ++        +Y +M+S GI  +  T N+LI+ F  +  +  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              +L  GY P   TF++LI G C  G++ + L+L D+M G+   P+V T+  LIN LCK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           + +L +A      +    + P  F Y+ +I G C  G+  EA  +   M  ++  PD++T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 510 FTILIIGHCMKGR---MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           F  L+   C +G    M +A+ +F +M + G  PD +T N+LI  L   G   +A  +  
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 567 R 567
            
Sbjct: 248 E 248



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 5/296 (1%)

Query: 137 KLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           +LG  F     +  L    S  T+  ++R LC  G       +FD M  +G  P+     
Sbjct: 60  RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             ++   +  +   A  L S      ++ + F Y+SL++ L    +  EA+ +F      
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179

Query: 256 YSQPDTWTFNILIQGLSRIGEVK---KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
              PD  TFN L+  L + G ++   KA   F +M   G  PD VTYNTLI GLC V  +
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                L  E+    +  PD+VTY  +    CK  ++ +A  +   +    + P    +++
Sbjct: 240 RDAIALFHEMVVYGQI-PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 298

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           ++DG  + G + +A  +  ++ S G  PDV T++ +I+G C+ G L +  KL  EM
Sbjct: 299 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 40/252 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+         +F  M + G  PN+      +      G    A  L    
Sbjct: 117 TYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 176

Query: 218 RPGEVTMSTFMYNSLLNALVKQNN---ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              ++      +N+L++AL K+      D+A+ +F+E  +    PDT T+N LI GL  +
Sbjct: 177 IHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 236

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTL-------------------------------- 302
           G ++ A   F++M  +G  PD+VTY  L                                
Sbjct: 237 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 296

Query: 303 ---ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
              + G+CR  E+    +L  ++  K    PDV TYT +I+G C+ G + +A+ ++ EM+
Sbjct: 297 SIVMDGMCRAGELEAARDLFSKLSSKG-LHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 355

Query: 360 SCGIKPSAVTFN 371
              I+ S  TF+
Sbjct: 356 ENDIE-SYSTFS 366


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 198/406 (48%), Gaps = 3/406 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           +M+ L   G  +    VF++MR   +  P+   I   +    R  +      L    R  
Sbjct: 52  IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV-KK 279
              +  + Y SL++AL +     EA+  F++      QP   T+N++I    + G   + 
Sbjct: 112 GYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWEN 171

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
             E F +M + G  PD  TYNT I+     +      EL  ++K  S  +PD VTY +++
Sbjct: 172 ILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMK-SSNCTPDRVTYNALL 230

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
             Y K G  ++A  +  EM S G  P+ VT+N L+  FG+ G   +A  M++ M+S G  
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIE 290

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PDV T++SL+  Y R G++ Q +++ ++M+  N +PN +TF  LI    K    ++    
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            + ++   + P    +N ++  F K G   E   +   M++   +PDK TF ILI  +  
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGR 410

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            G   +A+SI++ ML+ GC PD  T N+L++ L + G    A  I+
Sbjct: 411 CGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELIL 456



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 201/470 (42%), Gaps = 37/470 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +    GL ++   + D M S G  P+       +S+  RAGK + A  + +Q 
Sbjct: 260 TYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQM 319

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD--TW------------- 262
           R    T ++F +N+L+    K  N  E + +F++      +PD  TW             
Sbjct: 320 RTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMY 379

Query: 263 --------------------TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                               TFNILI+   R G   +A   +  M   GC+PD+ T+NTL
Sbjct: 380 SEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTL 439

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ++ L R         +L E+  +S + P+ + Y S++  Y   G+++K   + + +++  
Sbjct: 440 LAALAREGRWEHAELILDELN-RSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIY 498

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  + +     +  + K   +  AE     M   GYL D  TF+++I  Y + G +++  
Sbjct: 499 VPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKAT 558

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                ++   L P+V T+  L+    +E         L++       P    YN VI  +
Sbjct: 559 DTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSY 618

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G +  A  I  EM     +PD  T+   +  +   G   EA+S+   M + GC PD+
Sbjct: 619 SKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDE 678

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ-RASEDQNLQLPSWKKAVPLRTNTDI 591
           +T  +L+    K G   E  RI++   S D N    ++++      + D+
Sbjct: 679 VTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAYRRIAARVDDYDL 728



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 185/408 (45%), Gaps = 2/408 (0%)

Query: 155 SFKTYNLVMRSLCEMGLH-DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           S  TYN+++    + G   +++  +F+ M++ G  P+       +++C     C+ A  L
Sbjct: 151 SLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATEL 210

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
            +Q +    T     YN+LL+   K    +EA  + KE       P+  T+N L+    R
Sbjct: 211 FTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGR 270

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G    A E    M S G  PD+ TY +L+S   R  +V +  E+  +++  S  +P+  
Sbjct: 271 AGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMR-TSNCTPNSF 329

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T+ ++I  + K     +   I+ +M +CG++P  VT+N L+  FGK G       +   M
Sbjct: 330 TFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGM 389

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G+ PD  TF+ LI+ Y R G  +Q L + D M     +P++ TF  L+ AL +E R 
Sbjct: 390 KKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRW 449

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A   L +L  +   P    Y  ++  +   G +++   +V  +        K+     
Sbjct: 450 EHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTF 509

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           ++ +     + EA   F  M   G   D  T N++IS   K GM ++A
Sbjct: 510 VLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKA 557



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 192/419 (45%), Gaps = 2/419 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L+   + R +++      T  +++R L       +V  +F  +R +G+  +       +
Sbjct: 65  ALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLI 124

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY-MFKEYFRLYS 257
           S+  R  K   A G   Q +      S   YN +++   K+  + E +  +F+E      
Sbjct: 125 SALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGI 184

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           QPD +T+N  I   +     ++A E F  M S  C+PD VTYN L+    +         
Sbjct: 185 QPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAAN 244

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +LKE++  +   P++VTY  ++S + + G  + A  + + M S GI+P   T+  L+  +
Sbjct: 245 VLKEME-SAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAY 303

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G +  A  +  +M +    P+  TF++LI  + +N   ++ + + ++M+   + P++
Sbjct: 304 SRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDI 363

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  L+ A  K    ++  +  + +K     P    +N +I+ + + G+ D+A  I   
Sbjct: 364 VTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDG 423

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           M +  C PD  TF  L+     +GR   A  I +++ R    P+DI   S++     GG
Sbjct: 424 MLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGG 482



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 159/354 (44%), Gaps = 43/354 (12%)

Query: 257 SQPDTWTFNIL--IQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVA 313
           S+P+  +  +L  ++GL R G+  KA E F  M  S    PD VT   ++  L R +++ 
Sbjct: 40  SEPNLSSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLT 99

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               L K ++ +  +  DV  YTS+IS   +  K  +A G + +M   G +PS VT+NV+
Sbjct: 100 TVSRLFKSLR-EEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVI 158

Query: 374 IDGFGKVG----NMVS--------------------------------AEYMRERMLSFG 397
           ID +GK G    N++                                 A  +  +M S  
Sbjct: 159 IDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSN 218

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+++L+D Y + G  N+   +  EM+     PN+ T+  L++A  +    N A 
Sbjct: 219 CTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAA 278

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +    + P  F Y  ++  + +AG V++A  I  +M    C P+  TF  LI  H
Sbjct: 279 EMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMH 338

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE---AFRIMQRA 568
                  E + IF  M   G  PD +T NSL+    K GM +E    FR M++A
Sbjct: 339 GKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKA 392


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 181/324 (55%), Gaps = 13/324 (4%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           N+LLN L+K+++ D    M++ Y  + S+   P   T+N+L+    R G+V +A     +
Sbjct: 155 NALLNGLLKKSSFD---IMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISE 211

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  P +V Y TLI GLC  +++     + +++K    F P++ TY  ++ GYCK  
Sbjct: 212 MVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVF-PNLYTYNVLMDGYCKTA 270

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            + +A  +Y  M   G++P+ VTF +LID   KV  +++A     +M  FG +P+VV F+
Sbjct: 271 NVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFN 330

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           SLIDGY + G  ++   L  EM+   +SP+V+T++ILI   C+   + +A   LK+++  
Sbjct: 331 SLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKE 390

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIV------AEMEEKRCKPDKVTFTILIIGHCMK 520
            +     +YN +IDG+CK GN+++A  I       ++M     +PD + + +++ GH   
Sbjct: 391 GVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNA 450

Query: 521 GRMVEAISIFNKMLRIGCAPDDIT 544
             M + + +   M+++G  P+++T
Sbjct: 451 KHMADVMMLHADMIKMGIVPNEVT 474



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/304 (34%), Positives = 158/304 (51%), Gaps = 4/304 (1%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            F +LI   S +G V +A   +  +G+F   P +   N L++GL + +      EL   +
Sbjct: 121 VFGVLIIAFSEVGLVDEALRVYLKVGAF---PAVQACNALLNGLLKKSSFDIMWELYNNM 177

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +  F P VVTY  ++   C+ G + +A  + +EM   GI+P+ V +  LI G      
Sbjct: 178 VSRRLF-PTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESK 236

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           ++ AE M  +M   G  P++ T++ L+DGYC+   + Q L L   M    L PNV TF I
Sbjct: 237 LMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGI 296

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+ALCK   L  ARRF  Q+    +VP   ++N +IDG+ KAGN  EA  ++ EME+ +
Sbjct: 297 LIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFK 356

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD  T++ILI   C  G + EA  I  +M + G   + +  NSLI    K G   +A 
Sbjct: 357 ISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKAL 416

Query: 563 RIMQ 566
            I +
Sbjct: 417 EIFK 420



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 7/292 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ + C  G     + +   M   G  P   +    +       K   A+ +  Q 
Sbjct: 188 TYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQM 247

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V  + + YN L++   K  N  +A+++++       QP+  TF ILI  L ++ E+
Sbjct: 248 KDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVREL 307

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  FF  M  FG  P++V +N+LI G  +    +   +LL E++ K + SPDV TY+ 
Sbjct: 308 LAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEME-KFKISPDVFTYSI 366

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF- 396
           +I   C+LG +++A  I   M   G+  ++V +N LIDG+ K GNM  A  + +    F 
Sbjct: 367 LIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFS 426

Query: 397 -----GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                G  PD + ++ ++ G+     +   + L  +M    + PN  T  ++
Sbjct: 427 DMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVV 478



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 5/234 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++M   C+         ++  M  DG  PN       + +  +  +  AA+    Q 
Sbjct: 258 TYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQM 317

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  ++NSL++   K  N  EA  +  E  +    PD +T++ILI+   R+G V
Sbjct: 318 AKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTV 377

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-----FSPDV 332
           ++A +    M   G   + V YN+LI G C+   + +  E+ K  KF S+       PD 
Sbjct: 378 EEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDA 437

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           + Y  ++ G+     M     ++ +M   GI P+ VT  V+  G+   G + SA
Sbjct: 438 LAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSA 491


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 196/366 (53%), Gaps = 8/366 (2%)

Query: 203 RAGKCDAAKGLLSQFR-PGEVTMSTFMYNSLLNALVKQNN---ADEAVYMFKEYFRLYSQ 258
           R G+ + AK L+ +    G V  + F YN+LLNA V + +    DE + + ++   ++S 
Sbjct: 228 RRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFS- 286

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
               T++ILIQ  S  G++++A + F +M       D+  Y+++IS   R+  + R   L
Sbjct: 287 --VATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFAL 344

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             E+  + +  P+  TY ++I G CK G+M+ A  +  EM S G+  + V FN  +DG+ 
Sbjct: 345 FDEMS-QRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYC 403

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G M  A  ++  M   G   DV T++ L +G C+  + ++   + + M  K + PNV 
Sbjct: 404 RRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVV 463

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TFT+ I   CKE  L +A R  + ++    VP    YN +ID +CK   V +A+ I +EM
Sbjct: 464 TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K   PD  T++ LI G C+ GR+ EA+ +FN+M   G   +  T  S+IS L K G  
Sbjct: 524 INKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRA 583

Query: 559 NEAFRI 564
           +EAF++
Sbjct: 584 DEAFKL 589



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 195/399 (48%), Gaps = 2/399 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           ++  LV+  LC  G  +  + + D M   G + PN       +++ +          +L 
Sbjct: 217 QSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILK 276

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                +V  S   Y+ L+       + +EA  +F+E      + D + ++ +I    R+G
Sbjct: 277 LMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLG 336

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +K+AF  F +M      P+  TY  LI G+C+  ++     LL E++ K     ++V +
Sbjct: 337 NMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG-VDLNLVIF 395

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            + + GYC+ GKMD+A  +   M   GI     T+N+L +G  K+     A+ +   M+ 
Sbjct: 396 NTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVE 455

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+VVTF+  I+ YC+ G L +  +L  +M+ K   PN+ T+  LI+A CK+ ++  
Sbjct: 456 KGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQ 515

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +   ++    L+P  + Y+ +I G C  G VDEA  +  EM  K    +  T+T +I 
Sbjct: 516 AHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMIS 575

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           G   +GR  EA  ++++M++IG  PDD    SL+    K
Sbjct: 576 GLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 179/378 (47%), Gaps = 46/378 (12%)

Query: 140 LKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           LK +E  +V  S+     TY+++++     G  +  + +F+ MR                
Sbjct: 275 LKLMEKEQVVFSV----ATYSILIQWYSSSGDIEEAEKIFEEMREKN------------- 317

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
                                 + M  ++Y+S+++   +  N   A  +F E  +    P
Sbjct: 318 ----------------------IEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVP 355

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGH 316
           +  T+  LI G+ + G+++ A     +M S G   ++V +NT + G CR   ++E  R  
Sbjct: 356 NAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALR-- 413

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
             L+ +  K   + DV TY  + +G CKL + D+A  I N M   G+KP+ VTF + I+ 
Sbjct: 414 --LQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEI 471

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           + K GN+  AE +   M   G +P+++T+++LID YC+  ++ Q  K+  EM  K L P+
Sbjct: 472 YCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPD 531

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           +YT++ LI+  C   R+++A +   +++   +      Y  +I G  K G  DEA  +  
Sbjct: 532 LYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYD 591

Query: 497 EMEEKRCKPDKVTFTILI 514
           EM +    PD   FT L+
Sbjct: 592 EMMKIGLIPDDRVFTSLV 609



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 151/315 (47%), Gaps = 8/315 (2%)

Query: 266 ILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +L+  L R GEV     FF+ M  S      + +   +I  LCR  EV +  EL+ E+  
Sbjct: 185 VLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVG 244

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDK--ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           K    P+V TY ++++ Y  +G+ D+     I   M    +  S  T+++LI  +   G+
Sbjct: 245 KGIVKPNVFTYNTLLNAY--VGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGD 302

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  AE + E M       DV  +SS+I    R G + +   L DEM  +++ PN +T+  
Sbjct: 303 IEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGA 362

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI  +CK  ++  A   L +++   +     ++N  +DG+C+ G +DEA  + A ME+K 
Sbjct: 363 LIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKG 422

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA- 561
              D  T+ IL  G C   R  EA  I N M+  G  P+ +T    I    K G   EA 
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE 482

Query: 562 --FRIMQRASEDQNL 574
             FR M++  E  N+
Sbjct: 483 RLFRDMEKKGEVPNI 497



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 3/194 (1%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N    TYN++   LC++  +D  + + + M   G  PN      F+    + G    A+
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE 482

Query: 212 GLLSQF-RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
            L     + GEV  +   YN+L++A  K+    +A  +  E       PD +T++ LI G
Sbjct: 483 RLFRDMEKKGEVP-NIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHG 541

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
              +G V +A + F +M   G + ++ TY ++ISGL +        +L  E+  K    P
Sbjct: 542 ECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEM-MKIGLIP 600

Query: 331 DVVTYTSVISGYCK 344
           D   +TS++  + K
Sbjct: 601 DDRVFTSLVGSFHK 614


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 214/442 (48%), Gaps = 32/442 (7%)

Query: 156 FKTYNLVMRSLCEMGLHDSV--------QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           +  YN+++ S+C  G  DS+        +  +  M + G + N   +  F      AGK 
Sbjct: 407 YVVYNILIGSIC--GDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKY 464

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  ++ +         T  Y+ +L  L   +  + A  +F+E  R     D +T+ I+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +    + G +++A ++F +M   GC+P++VTY  LI    +  +V+  +EL  E      
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEG 583

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK-------------------PSAV 368
             P++VTY+++I G+CK G+M+KA  I+  M  CG K                   P+ V
Sbjct: 584 CLPNIVTYSALIDGHCKAGQMEKACQIFERM--CGSKDVPDVDMYFKQYDDDNSERPNVV 641

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            +  L+DGF K+  +  A  + + M   G  P+ + + +LIDG C+ G+L++  ++  EM
Sbjct: 642 IYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEM 701

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                   +YT++ LI+   K  R + A + L ++  N   P   +Y  +IDG CK G  
Sbjct: 702 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 761

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           DEA  ++  MEEK C+P+ VT+T +I G    G++   + +  +M   G AP+ +T   L
Sbjct: 762 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVL 821

Query: 549 ISCLLKGGMPNEAFRIMQRASE 570
           I    K G  + A  +++   +
Sbjct: 822 IDHCCKNGALDVAHNLLEEMKQ 843



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 209/489 (42%), Gaps = 87/489 (17%)

Query: 137 KLGLKFLEFSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K+ L FL F  +    L     TY +++ S C+ GL +  +  F+ MR  G  PN     
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE---- 251
             + + ++A K   A  L           +   Y++L++   K    ++A  +F+     
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGS 617

Query: 252 --------YFRLY-----SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                   YF+ Y      +P+   +  L+ G  ++  V++A +    M   GC P+ + 
Sbjct: 618 KDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIV 677

Query: 299 YNTLISGLCRVNEVARGHELLKEVK----------------------------------F 324
           Y+ LI GLC+V ++    E+  E+                                    
Sbjct: 678 YDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 737

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           ++  +P+VV YT +I G CK+GK D+A  +   M   G +P+ VT+  +IDGFG++G + 
Sbjct: 738 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIE 797

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN------------------------- 419
           +   + ERM S G  P+ VT+  LID  C+NG L+                         
Sbjct: 798 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVI 857

Query: 420 --------QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW--NDLV 469
                   + L L DE+   + +P +  + +L++ L K  RL  A R L+++      LV
Sbjct: 858 EGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLV 917

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                YN +I+  C A  VD+A  + +EM +K   P+  TF  LI G     ++ EA+ +
Sbjct: 918 DYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLL 977

Query: 530 FNKMLRIGC 538
            + +  + C
Sbjct: 978 LDFISHMVC 986



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 203/488 (41%), Gaps = 95/488 (19%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LCE  L +      + MR+   LPN       +  C+   +    K +L+   
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI---------- 268
                 S  ++NSL++A     +   A  + K+  +    P    +NILI          
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSL 424

Query: 269 -------------------------------QGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                                          + L   G+ +KAF    +M   G  PD  
Sbjct: 425 SCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ ++  LC  +++     L +E+K +     DV TYT ++  +CK G +++A   +NE
Sbjct: 485 TYSKVLGYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VT+  LI  + K   +  A  + E MLS G LP++VT+S+LIDG+C+ GQ
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           + +  ++ + M G    P+V  +        K+   +++ R           P   +Y  
Sbjct: 604 MEKACQIFERMCGSKDVPDVDMYF-------KQYDDDNSER-----------PNVVIYGA 645

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS--------- 528
           ++DGFCK   V+EA  ++  M  + C+P+++ +  LI G C  G++ EA           
Sbjct: 646 LLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHG 705

Query: 529 --------------------------IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
                                     + +KML   CAP+ +    +I  L K G  +EA+
Sbjct: 706 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 765

Query: 563 RIMQRASE 570
           ++MQ   E
Sbjct: 766 KLMQMMEE 773



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 206/491 (41%), Gaps = 39/491 (7%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R   EKLS    +EV++ ++ P   + F  ++   +   H+   YN ++  +        
Sbjct: 124 RQFREKLSESLVIEVLRLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKV 183

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
            + +   +R D        +   V    R+G    A   L + +      S   YN L+ 
Sbjct: 184 PEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQ 243

Query: 235 ALVKQNNADEAVYMFKEY-----------FRLYSQ---------------------PDTW 262
           A +K +  D A  + +E             R Y+                      PDT 
Sbjct: 244 AFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTV 303

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            +  LI GL      ++A +F   M +  C P++VTY+TL+ G     ++ R   +L  +
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +  + P    + S++  YC  G    A  +  +M  CG  P  V +N+LI       +
Sbjct: 364 MMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD 422

Query: 383 MVS------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
            +S      AE     ML+ G + + +  SS     C  G+  +   +  EM G+   P+
Sbjct: 423 SLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T++ ++  LC  +++  A    +++K   LV   + Y  ++D FCKAG +++A     
Sbjct: 483 TSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM E  C P+ VT+T LI  +    ++  A  +F  ML  GC P+ +T ++LI    K G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602

Query: 557 MPNEAFRIMQR 567
              +A +I +R
Sbjct: 603 QMEKACQIFER 613


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 211/449 (46%), Gaps = 47/449 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T+  +M+   E G  ++   V   M   G       +   ++   + G+ + A G + Q 
Sbjct: 126 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 185

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P ++T     YN+ +N L + ++   A+ +     +    PD +T+NI++  L 
Sbjct: 186 IADGFEPDQIT-----YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G++++A      M   GC PDI T+NTLI+ LC  N +    +L ++V  K   SPDV
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG-VSPDV 299

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+  +I+  CK+G    A  ++ EM + G  P  VT+N LID    +G +  A  + + 
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 359

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G     +T++++IDG C+  ++ +  ++ D+M  + +S N  TF  LI+ LCK+ +
Sbjct: 360 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 419

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA   + Q+    L P    YN ++  +CK G++ +A  I+  M     + D VT+  
Sbjct: 420 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479

Query: 513 LIIGHCMKGR-----------------------------------MVEAISIFNKMLRIG 537
           LI G C  GR                                   + +A+S+F +M  +G
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539

Query: 538 CAPDDITVNSLISCLLKGGMP-NEAFRIM 565
             PD +T   +   L +GG P  EAF  M
Sbjct: 540 EPPDALTYKIVFRGLCRGGGPIKEAFDFM 568



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 208/426 (48%), Gaps = 9/426 (2%)

Query: 144 EFSRVNLSLNHSF-KTYNLVMRSLCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSC 201
           E  +V L + HSF  +Y        +    D+V ++ + ++   G   ++ +    ++  
Sbjct: 11  EGHQVKLGVVHSFLDSYE------GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVL 64

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           +   K    + + S+     +      +N+L+ AL + +    AV M +E       PD 
Sbjct: 65  VEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDE 124

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            TF  L+QG    G ++ A      M   GCS   VT N LI+G C++  V      +++
Sbjct: 125 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 184

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
            +    F PD +TY + ++G C+   +  A  + + M   G  P   T+N++++   K G
Sbjct: 185 -EIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 243

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A+ +  +M+  G LPD+ TF++LI   C   +L + L L  ++  K +SP+VYTF 
Sbjct: 244 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 303

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           ILINALCK    + A R  +++K +   P    YN +ID  C  G + +A  ++ +ME  
Sbjct: 304 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST 363

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C    +T+  +I G C K R+ EA  +F++M   G + + IT N+LI  L K    ++A
Sbjct: 364 GCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 423

Query: 562 FRIMQR 567
           F ++ +
Sbjct: 424 FELINQ 429



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 3/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++  L E      ++ V+  M + G  P+       + +  RA +   A  +L + 
Sbjct: 56  VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 115

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      + +L+   V++ + + A+ +      +       T N+LI G  ++G V
Sbjct: 116 SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 175

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL-LKEVKFKSEFSPDVVTYT 336
           + A  +     + G  PD +TYNT ++GLC+ + V  GH L + +V  +    PDV TY 
Sbjct: 176 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV--GHALKVMDVMVQEGHDPDVFTYN 233

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            V++  CK G++++A GI N+M   G  P   TFN LI        +  A  +  ++   
Sbjct: 234 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV TF+ LI+  C+ G  +  L+L +EMK    +P+  T+  LI+ LC   +L  A
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              LK ++          YN +IDG CK   ++EA  +  +M+ +    + +TF  LI G
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 413

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C   ++ +A  + N+M+  G  P++IT NS+++   K G   +A  I++
Sbjct: 414 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILE 463



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 199/409 (48%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +M++LC      +  ++ + M S G  P+       +   +  G  +AA  + ++ 
Sbjct: 91  TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 150

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +    N L+N   K    ++A+   ++      +PD  T+N  + GL +   V
Sbjct: 151 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 210

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   G  PD+ TYN +++ LC+  ++     +L ++  +    PD+ T+ +
Sbjct: 211 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL-PDITTFNT 269

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C   ++++A  +  ++   G+ P   TFN+LI+   KVG+   A  + E M + G
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+++LID  C  G+L + L L  +M+      +  T+  +I+ LCK+ R+ +A 
Sbjct: 330 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 389

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q+    +      +N +IDG CK   +D+A  ++ +M  +  +P+ +T+  ++  +
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C +G + +A  I   M   G   D +T  +LI+ L K G    A ++++
Sbjct: 450 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 498



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 119/242 (49%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              D V Y  +++   +  KM     +Y+EM + GIKP  VTFN L+    +   + +A 
Sbjct: 50  IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M E M S G  PD  TF++L+ G+   G +   L++   M     S    T  +LIN  
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  R+ DA  +++Q   +   P    YN  ++G C+  +V  A  ++  M ++   PD 
Sbjct: 170 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 229

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+ I++   C  G++ EA  I N+M+  GC PD  T N+LI+ L  G    EA  + ++
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQ 289

Query: 568 AS 569
            +
Sbjct: 290 VT 291



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 67/139 (48%)

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  +   +  L+N L + +++        ++    + P    +N ++   C+A  V  A 
Sbjct: 50  IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +++ EM  +   PD+ TFT L+ G   +G +  A+ +  +ML +GC+   +TVN LI+  
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169

Query: 553 LKGGMPNEAFRIMQRASED 571
            K G   +A   +Q+   D
Sbjct: 170 CKLGRVEDALGYIQQEIAD 188


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 204/426 (47%), Gaps = 7/426 (1%)

Query: 119 EKLSPLNSLEVI----KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           EKL+P  S E++    +    P+LG +F  ++    S   S+ T+NLV+  L +    D+
Sbjct: 56  EKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDT 114

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
              + + +++       P     +++  ++G  + A     + +        F YNS+L+
Sbjct: 115 YWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILH 174

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            +V++     A+ ++ +  +L   P+  TF IL+ GL + G+   A + F +M   G  P
Sbjct: 175 VMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPP 234

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + + Y  ++SGLC+       H LL  +K  S   PD +T  +++ G+CKLG++D+A  +
Sbjct: 235 NTMIYTIILSGLCQAKRTDDVHRLLNTMKV-SGCCPDSITCNALLDGFCKLGQIDEAFAL 293

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
                  G       ++ LIDG  +       +    +M   G  PDVV ++ LI G+C 
Sbjct: 294 LQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCE 353

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G ++  L + ++M  + LSP+ Y +  LI   C    L+ AR    ++  ND  P    
Sbjct: 354 VGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCT 413

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y  +I G C+ G +DEA  I  +ME   C P  +TF  LI G C  G + EA  +F KM 
Sbjct: 414 YTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM- 472

Query: 535 RIGCAP 540
            IG  P
Sbjct: 473 EIGKNP 478



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 174/381 (45%), Gaps = 13/381 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++  LC+    D V  + + M+  G  P+S      +    + G+ D A  LL  F 
Sbjct: 239 YTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFE 298

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                +    Y+SL++ L +    DE     ++ F+   +PD   + ILI+G   +G V 
Sbjct: 299 KEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVD 358

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     DM   G SPD   YN LI G C V  + +   L  E+  K++  P   TYT +
Sbjct: 359 YALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEIS-KNDCFPTSCTYTIL 417

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G C+ G +D+A  I+N+M + G  PS +TFN LIDG  K G +  A ++  +M   G 
Sbjct: 418 ICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGK 476

Query: 399 LPDVVTFSS--------LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
            P +    S          +G+ R  +     ++ D+M     +P+   +  L+   C++
Sbjct: 477 NPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRK 536

Query: 451 NRLNDA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +L+ A   +LK L+   L  +      + +   + G +++A   + EM  K    +   
Sbjct: 537 GKLSVAFSLWLKYLR--SLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAP 594

Query: 510 FTILIIGHCMKGRMVEAISIF 530
           +TI +IG C   R  EA+ IF
Sbjct: 595 YTIWLIGLCQARRSEEALKIF 615



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%)

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VT+  VI    K    D    I  E+ +  I+    TF+VLI  + K G    A     +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M  FG  PDV T++S++    +       L + ++M   N +PN  TF IL+N LCK  +
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            +DA +   ++    + P   +Y  ++ G C+A   D+ + ++  M+   C PD +T   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           L+ G C  G++ EA ++     + G        +SLI  L +    +E 
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEV 325



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 170/409 (41%), Gaps = 19/409 (4%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K Y+ ++  L     +D VQ     M   G  P+  +    +      G  D A  +L+ 
Sbjct: 307 KGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLND 366

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                ++  T+ YN+L+         D+A  +  E  +    P + T+ ILI G+ R G 
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS------EFSP 330
           + +A + F  M + GCSP I+T+N LI GLC+  E+     L  +++           S 
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQ 486

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA---- 386
                    +G+ ++ + + A  + ++M   G  PS+  +  L+    + G +  A    
Sbjct: 487 GADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW 546

Query: 387 -EYMRERMLSFGYLPDVVTFS-SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            +Y+R        LP     +  L + +   G+L + ++   EM  K  +  +  +TI +
Sbjct: 547 LKYLRS-------LPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWL 599

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
             LC+  R  +A +    LK   +   P     +I+G CK GN++ A  I     EK   
Sbjct: 600 IGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFM 659

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
                   L+    ++ +M  A+ + N+M   G   D+   + + S LL
Sbjct: 660 LMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLL 708



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 72/132 (54%)

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T  ++I+ L K++  +   + L++LK +++   P  ++ +I  + K+G  ++A     +M
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           ++  CKPD  T+  ++     K   + A++++N+ML++   P+  T   L++ L K G  
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217

Query: 559 NEAFRIMQRASE 570
           ++A ++    ++
Sbjct: 218 DDALKMFDEMTQ 229


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 204/395 (51%), Gaps = 4/395 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI-RAGKCDAAKGLLSQ 216
           TYNL+ R+LC+ G  +  + + + M S G   +S +    V+  + R G+ ++   L+S+
Sbjct: 373 TYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISE 432

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  +  +  +    L +     EAV ++ +        +  T N LI GL     
Sbjct: 433 MVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKN 492

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K A E    M + G   D +TYN +I G C+ +++    +L  ++  +  F PD   + 
Sbjct: 493 MKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDM-IRKGFKPDAYMFN 551

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLS 395
           S+I  YC LGKM++A  +  +M   G++P  V++  +IDG+ K  ++  A EY+ E +++
Sbjct: 552 SIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNE-LMA 610

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ V +++LI GY RNG ++  + + D M+   + P   T+  L++ +C    +++
Sbjct: 611 CGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDE 670

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+   +Q + N +      Y  +I G CK G +DEA     EM  +   P+K+T+T L+ 
Sbjct: 671 AKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMY 730

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            +C  G   EA  +F++M+  G  PD+++ N+L++
Sbjct: 731 AYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVT 765



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 244/541 (45%), Gaps = 36/541 (6%)

Query: 48  LLFFTVRPSRVRASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSS 107
           LL  T   S  R S   A+  FH L++             R S        +   L R+ 
Sbjct: 160 LLINTCVTSSARGSLRLAVDAFHVLSS------------RRASPSVKTCNALLEALARTG 207

Query: 108 YLSDTCARYL----CEKLSP--------LNSLEVIKRLDNPKLGLKFL-EFSRVNLSLNH 154
            L  TC  +     C+ ++P        + +L  + ++D+   G K L +     L  + 
Sbjct: 208 NLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDD---GFKILSDLIHAGLQQSA 264

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
               YNL+M +LC+ G  D    +   M      P+       ++   R+ +      LL
Sbjct: 265 GAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALL 324

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +T +  + N L++   ++ +  EA+ +F E      +    T+N++ + L + 
Sbjct: 325 REMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKE 384

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC----RVNEVARGHELLKEVKFKSEFSP 330
           GE+++A     +M S G +     +N++++GL     R+  V R   L+ E+  K    P
Sbjct: 385 GEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVR---LISEM-VKRGMKP 440

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +    T+     C+  +  +A GI+ +M   G+  +  T N LI G  +  NM  A  + 
Sbjct: 441 NDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVL 500

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             M++ G   D +T++ +I G C++ ++ + LKL D+M  K   P+ Y F  +I+A C  
Sbjct: 501 RTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDL 560

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            ++ +A   L Q+K   + P    Y  +IDG+CKA ++ +AN  + E+     KP+ V +
Sbjct: 561 GKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIY 620

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             LI G+   G +  AI + + M  IG  P ++T  SL+  +   G+ +EA  + +++ +
Sbjct: 621 NALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRK 680

Query: 571 D 571
           +
Sbjct: 681 N 681


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 194/378 (51%), Gaps = 41/378 (10%)

Query: 227 FMYNSLLNALVKQNNADEAV---YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           F YN+LL  L  +N + EA+   +M  +     S PD  ++N ++ G  + G+  KA+  
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
           +++M   G  PD+VTY+++I+ LC+   + +  E+L  +  K+   PD +TY S++ GYC
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYC 282

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
             G+  +A G   +M S G++P+ VT++ L++   K G    A  + + M   G  PD+ 
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+ +L+ GY   G L +   L D M    + P+ + F ILI A  K+ +++ A     ++
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG------- 516
           + + L P    Y  VID  CK+G+VD+A +   +M ++   P+ + +T LI G       
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 517 ----------------------------HCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
                                       HC +GR++E+  +F+ M+RIG  PD IT N+L
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 549 I-SCLLKGGMPNEAFRIM 565
           I  C L G M +EA +++
Sbjct: 523 IDGCCLAGKM-DEATKLL 539



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 192/395 (48%), Gaps = 1/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+    + G  D     +  M   G LP+       +++  +A   D A  +L+  
Sbjct: 203 SYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM 262

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      YNS+L+         EA+   K+      +P+  T++ L+  L + G  
Sbjct: 263 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS 322

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M   G  PDI TY TL+ G      +   H LL ++  ++   PD   +  
Sbjct: 323 TEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL-DLMVRNGIQPDHHVFNI 381

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y K  K+D+A  ++++M   G+ P+ V +  +ID   K G++  A    E+M+  G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++ ++SLI G C   + ++  +L  EM  + +  N   F  +I++ CKE R+ ++ 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    + P    YN +IDG C AG +DEA  ++A M     KPD VT+  LI G+
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           C   RM +A+++F +M+  G +P+ IT N ++  L
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 194/434 (44%), Gaps = 36/434 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ +M  LC+ G     + +FD M   G  P+       +      G       LL   
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     ++N L+ A  KQ   D+A+ +F +  +    P+   +  +I  L + G V
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +F  M   G +P+I+ Y +LI GLC  ++  +  EL+ E+        + + + S
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIFFNS 486

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK G++ ++  +++ M   G+KP  +T+N LIDG    G M  A  +   M+S G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI------------- 444
             PD+VT+ +LI+GYCR  +++  L L  EM    +SPN+ T+ I++             
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606

Query: 445 ----------------------NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                                 + LCK N  ++A R  + L   DL  +   +N +I   
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G +DEA  + A        PD  T++++      +G + E   +F  M   GC+ D 
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726

Query: 543 ITVNSLISCLLKGG 556
             +NS++  LL+ G
Sbjct: 727 RMLNSIVRKLLQRG 740



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 182/404 (45%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G           MRSDG  PN       ++   + G+   A+ +    
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +LL     +    E   +     R   QPD   FNILI   ++  +V
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G +P++V Y T+I  LC+   V     L  E       +P+++ YTS
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM-LYFEQMIDEGLTPNIIVYTS 451

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   K DKA  +  EM   GI  + + FN +ID   K G ++ +E + + M+  G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++T+++LIDG C  G++++  KL   M    + P++ T+  LIN  C+ +R++DA 
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K++  + + P    YN ++ G         A  +   + +   + +  T+ I++ G 
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C      EA+ +F  +       +  T N +I  LLK G  +EA
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 168/352 (47%), Gaps = 3/352 (0%)

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           +++   G+VT +   Y  L+    +    D          +   + D  TF  L++GL  
Sbjct: 80  MARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCA 139

Query: 274 IGEVKKAFEF-FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK--SEFSP 330
                 A +     M   GC PD+ +YN L+ GLC  N      ELL  +         P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DVV+Y +V++G+ K G  DKA   Y+EM   GI P  VT++ +I    K   M  A  + 
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVL 259

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
             M+  G +PD +T++S++ GYC +GQ  + +    +M+   + PNV T++ L+N LCK 
Sbjct: 260 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            R  +AR+    +    L P    Y  ++ G+   G + E + ++  M     +PD   F
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            ILI  +  + ++ +A+ +F+KM + G  P+ +   ++I  L K G  ++A 
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ +LC+    D    V + M  +G +P+       +     +G+   A G L + 
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V  +   Y+SL+N L K   + EA  +F    +   +PD  T+  L+QG +  G +
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGAL 357

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +       M   G  PD   +N LI    +  +V +   +  +++ +   +P+VV Y +
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR-QHGLNPNVVCYGT 416

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI   CK G +D A   + +M   G+ P+ + +  LI G         AE +   ML  G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + + F+S+ID +C+ G++ +  KL D M    + P++ T+  LI+  C   ++++A 
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L  +    + P    Y  +I+G+C+   +D+A  +  EM      P+ +T+ I++ G 
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               R   A  ++  + + G   +  T N ++  L K  + +EA R+ Q
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 167/354 (47%), Gaps = 1/354 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D   +VF  MR  G  PN       +    ++G  D A     Q     +T +  +Y SL
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++ L   +  D+A  +  E        +T  FN +I    + G V ++ + F  M   G 
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 512

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PDI+TYNTLI G C   ++    +LL  +       PD+VTY ++I+GYC++ +MD A 
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASM-VSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ EM S G+ P+ +T+N+++ G        +A+ +   +   G   ++ T++ ++ G 
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+N   ++ L++   +   +L     TF I+I AL K  R+++A+        N LVP  
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             Y+ + +   + G+++E + +   MEE  C  D      ++     +G +  A
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 3/280 (1%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            LE     + LN  F  +N ++ S C+ G     + +FD M   G  P+       +  C
Sbjct: 469 ILEMLDRGICLNTIF--FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 526

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
             AGK D A  LL+      V      Y +L+N   + +  D+A+ +FKE       P+ 
Sbjct: 527 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNI 586

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T+NI++QGL        A E +  +   G   ++ TYN ++ GLC+ N       + + 
Sbjct: 587 ITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 646

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +   ++   +  T+  +I    K G+MD+A  ++   ++ G+ P   T++++ +   + G
Sbjct: 647 LCL-TDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQG 705

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           ++   + +   M   G   D    +S++    + G + + 
Sbjct: 706 SLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    Y  +I   C+AG +D     +  + +K  + D +TFT L+ G C   R  +A+
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 528 SI-FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            I   +M  +GC PD  + N+L+  L       EA  ++   ++D+
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDR 193


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 204/428 (47%), Gaps = 11/428 (2%)

Query: 150 LSLNHSFKTY---------NLVMRSLCEM--GLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           LSL+H   ++         ++++ S C +  G       +FD M  +G  P+       +
Sbjct: 81  LSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLI 140

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           +   + G   AA  LL          + F YN+++++L K     EA  +F E       
Sbjct: 141 NGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGIS 200

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD +T+N LI  L  + E K       +M      PD+V++NT++  LC+  +V   H++
Sbjct: 201 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 260

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           + ++  +    P+V++Y ++I+GYCK+ ++DKA  ++ EM    + P  VT++ LI G  
Sbjct: 261 VDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 320

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
            V  +  A  +   M++   +P++VT+  L+D  C+N  L + + L   ++G NL P++ 
Sbjct: 321 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 380

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
              I I+ +C+   L  AR     L    L P  + Y+ +I+G C+ G +DEA+ +  EM
Sbjct: 381 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 440

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           +E  C  +   +  +  G         AI +  +M+  G + D  T+   +  L   G+ 
Sbjct: 441 DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLD 500

Query: 559 NEAFRIMQ 566
               +I++
Sbjct: 501 QSLKQILR 508



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 169/343 (49%), Gaps = 4/343 (1%)

Query: 232 LLNALVKQNNAD--EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           L+N+    N     EA+++F +      +PD  T+  LI GL ++G    A      M  
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
             C P++  YNT+I  LC+  +V     L  E+  K   SPD+ TY S+I   C L +  
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG-ISPDIFTYNSLIHALCNLCEWK 220

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG-YLPDVVTFSSL 408
               + NEM    I P  V+FN ++D   K G +  A  + ++M+  G  +P+V+++++L
Sbjct: 221 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTL 280

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+GYC+  ++++ + L  EM  + L P+  T++ LI+ LC   RL DA     ++     
Sbjct: 281 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +P    Y  ++D  CK   + EA  ++  +E     PD     I I G C  G +  A  
Sbjct: 341 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 400

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +F+ +   G  PD  T + +I+ L + G+ +EA ++ +   E+
Sbjct: 401 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDEN 443



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 167/337 (49%), Gaps = 3/337 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D A+  F    R+   P T  FN L+  ++++          + M SFG  P+I T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSE-FSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           + LI+  C +N    G  L    K   E F PDVVTY ++I+G CK+G    A  +   M
Sbjct: 100 HILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                +P+   +N +ID   K   +  A  +   M++ G  PD+ T++SLI   C   + 
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 219

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL-KQLKWNDLVPKPFMYNP 477
                L +EM    + P+V +F  +++ALCKE ++ +A   + K ++    +P    YN 
Sbjct: 220 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNT 279

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G+CK   +D+A  +  EM  +   PD VT++ LI G C   R+ +AI++F++M+   
Sbjct: 280 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 339

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
             P+ +T   L+  L K     EA  ++ +A E  NL
Sbjct: 340 QIPNLVTYRILLDYLCKNRYLAEAMALL-KAIEGSNL 375


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 215/450 (47%), Gaps = 38/450 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY L++   C+       +++F+ M S G  PN       +   I+ G  + A  +  + 
Sbjct: 313 TYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + ++   YN+++  + K     +A+ +F E      +PDTWT+N+LI G  +  ++
Sbjct: 373 ITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDM 432

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL------------------ 319
            KA E   +M +   +P   TY+ LISGLC  +++ + +E+L                  
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTL 492

Query: 320 -----KEVKFKSEFS-----------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                +E +++               PD+  Y  +I G C+  K+++A  +  +M   GI
Sbjct: 493 IKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI 552

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP+A T+   I+ + K G +  AE   + MLS G +P+ V ++ LI G+C  G   + L 
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARR-FLKQLKWNDLVPKPFMYNPVIDGF 482
               M  K L P++  ++ +I++L K  +  +A   FLK LK   +VP  F+YN +I GF
Sbjct: 613 TFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK-TGVVPDVFLYNSLISGF 671

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILI--IGHCMKGRMVEAISIFNKMLRIGCAP 540
           CK G++++A+ +  EM      P+ V +  LI   G+C  G + EA  +F++M+  G +P
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISP 731

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D      LI    K G   +A  +   A +
Sbjct: 732 DGYIYCILIDGCGKEGNLEKALSLFHEAQQ 761



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 190/399 (47%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN  +  LC+ G  D    V   M   G  P+       V    +  +   AK +    
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + F Y +L++  +K+ N +EA+ +  E      + +  T+N +I G+++ GE+
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA   F +M   G  PD  TYN LI G  + +++A+  ELL E+K + + +P   TY+ 
Sbjct: 398 AKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR-KLTPSPFTYSV 456

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG C    + KA  + ++M   G+KP+   +  LI  + +      A  + + M++ G
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD+  ++ LI G CR  ++ +   L  +M  K + PN +T+   IN   K   +  A 
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R+ K +  + +VP   +Y  +I G C  GN  EA      M EK   PD   ++ +I   
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL 636

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
              G+  EA+ +F K L+ G  PD    NSLIS   K G
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 199/443 (44%), Gaps = 37/443 (8%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N +MR L +  +      V+  M     +P+       + +  + G     K +LS+   
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK 270

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
            E   + F YN+ +  L +    DEA+ + K        PD  T+ +L+ G  +    K+
Sbjct: 271 -ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A   F  M S G +P+  TY  LI G  +   +     +  E+  +     +VVTY ++I
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG-LKLNVVTYNAMI 388

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G  K G+M KA  ++NEM   GI+P   T+N+LIDG+ K  +M  A  +   M +    
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P   T+S LI G C +  L +  ++ D+M    + PNV+ +  LI A  +E+R   A   
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK--------------- 504
           LK +  N ++P  F YN +I G C+A  V+EA +++ +M EK  K               
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 505 --------------------PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
                               P+ V +TILI GHC  G  VEA+S F  ML  G  PD   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 545 VNSLISCLLKGGMPNEAFRIMQR 567
            +++I  L K G   EA  +  +
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLK 651



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 206/418 (49%), Gaps = 8/418 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC     +  +++   M   G  PN+     F++   ++G+   A+       
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +  +Y  L+       N  EA+  FK        PD   ++ +I  LS+ G+ K
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A   F      G  PD+  YN+LISG C+  ++ +  +L  E+   +  +P++V Y ++
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM-LHNGINPNIVVYNTL 702

Query: 339 IS--GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE--YMRERML 394
           I+  GYCK G + +A  +++EM S GI P    + +LIDG GK GN+  A   +   +  
Sbjct: 703 INDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 762

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G L     F+SLID +C++G++ +  +L D+M  K L+PN+ T+TILI+A  K   + 
Sbjct: 763 SVGSLS---AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMME 819

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A +    ++  +++P    Y  ++  + + GN  +   +  +ME +    D + + ++ 
Sbjct: 820 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMA 879

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
             +C +G+ +EA+ + NK L  G   +D   ++LI  L K    +    ++    +++
Sbjct: 880 SAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEE 937



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 188/394 (47%), Gaps = 4/394 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y ++++  C++G        F  M   G +P+       + S  + GK   A G+  +F 
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ--GLSRIGE 276
              V    F+YNSL++   K+ + ++A  ++ E       P+   +N LI   G  + G 
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGN 713

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +AF+ F +M S G SPD   Y  LI G  +   + +   L  E + KS  S  +  + 
Sbjct: 714 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS--LSAFN 771

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I  +CK GK+ +A  ++++M    + P+ VT+ +LID +GK   M  AE +   M + 
Sbjct: 772 SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 831

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             +P+ +T++SL+  Y + G   + + L  +M+ + ++ +   + ++ +A CKE +  +A
Sbjct: 832 NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 891

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L +     +  +  +++ +I   CK   +     +++EM ++       T   L++G
Sbjct: 892 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 951

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
               G   EA  +   M R+G  P  +++   IS
Sbjct: 952 FYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 985



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 90/216 (41%), Gaps = 1/216 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N ++ S C+ G     + +FD M      PN       + +  +A   + A+ L 
Sbjct: 766 SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 825

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  +  +T  Y SLL +  +  N  + + +FK+        D   + ++     + 
Sbjct: 826 LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE 885

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+  +A +        G   +   ++ LI  LC+  +++   ELL E+  K E S    T
Sbjct: 886 GKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG-KEELSLSSKT 944

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
             +++ G+ K G  D+A+ +   M   G  P++++ 
Sbjct: 945 CNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSL 980


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 211/450 (46%), Gaps = 40/450 (8%)

Query: 145 FSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           FS V  +L   F+    T++ ++   C  G       + D M    + PN   +   ++ 
Sbjct: 124 FSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLING 183

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
               G+   A  L+ +        +   Y  +LN + K  N   A+ +F++      +  
Sbjct: 184 LCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKAS 243

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
              ++I+I  L + G +  A   F +M   G   D+V Y+++I GLC       G ++L+
Sbjct: 244 VVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLR 303

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+       P+VVT++++I  + K GK+ +A  +YNEM + GI P  +T++ LIDGF K 
Sbjct: 304 EM-IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKE 362

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLID------------------------------ 410
             +  A  M + M+S G  P++VT+S LI+                              
Sbjct: 363 NRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTY 422

Query: 411 -----GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
                G+C++G+LN   +L  EM  + + P+V T+ IL++ LC    L  A    ++++ 
Sbjct: 423 NTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQK 482

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           + ++    +YN +I G C A  VD+A  +   +  K  KPD +T+ ++I G C KG + E
Sbjct: 483 SRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSE 542

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           A  +F KM   GCAP D T N LI   L G
Sbjct: 543 ADMLFRKMKEDGCAPSDCTYNILIRAHLGG 572



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 203/405 (50%), Gaps = 2/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  +C+ G       +F  M       +       + S  + G  D A  L ++ 
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+S++  L      D+   M +E       P+  TF+ LI    + G++
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E + +M + G +PD +TY++LI G C+ N +   +++L ++       P++VTY+ 
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML-DLMVSKGCEPNIVTYSI 389

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+ YCK  ++D    ++ E++S G+    VT+N L+ GF + G +  A+ + + M+S G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT+  L+DG C NG+L + L++ ++M+   +   +  + I+I+ +C  ++++DA 
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I G CK G++ EA+++  +M+E  C P   T+ ILI  H
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAH 569

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
                ++ ++ +  +M   G A D  T+  ++  +L  G  ++ F
Sbjct: 570 LGGSGVISSVELIEEMKMRGFAADASTIK-MVVVMLSDGRLDKTF 613



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 211/461 (45%), Gaps = 48/461 (10%)

Query: 152 LNHSFKTYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           + H+  T N+++   C +  L  +  VV   ++  G  PN+      ++     G+   A
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKF-GFEPNTITFSTLINGFCLEGRVSEA 158

Query: 211 KGLLS-----QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             L+      ++RP  VT+     N+L+N L  +    EA+ +     +   + +  T+ 
Sbjct: 159 VALVDRMVEMKYRPNVVTV-----NTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            ++  + + G    A + F  M        +V Y+ +I  LC+   +     L  E++ K
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
                DVV Y+S+I G C  G+ D    +  EM    I P+ VTF+ LID F K G ++ 
Sbjct: 274 G-IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLE 332

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A+ +   M++ G  PD +T+SSLIDG+C+  +L +  ++ D M  K   PN+ T++ILIN
Sbjct: 333 AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           + CK  R+++  R   ++    LV     YN ++ GFC++G ++ A  +  EM  +   P
Sbjct: 393 SYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPP 452

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRI----------------------------- 536
             VT+ IL+ G C  G + +A+ IF KM +                              
Sbjct: 453 SVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLF 512

Query: 537 ------GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
                 G  PD +T N +I  L K G  +EA  + ++  ED
Sbjct: 513 CSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKED 553



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 6/356 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P  +T ST     L+N    +    EAV +      +  +P+  T N LI GL   G 
Sbjct: 135 FEPNTITFST-----LINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGR 189

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A      M  +GC  + +TY  +++ +C+    A   +L ++++ +S     VV Y+
Sbjct: 190 VTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERS-IKASVVQYS 248

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            VI   CK G +D A  ++NEM   GIK   V ++ +I G    G       M   M+  
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             +P+VVTFS+LID + + G+L +  +L +EM  + ++P+  T++ LI+  CKENRL +A
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L  +      P    Y+ +I+ +CKA  VD    +  E+  K    D VT+  L+ G
Sbjct: 369 NQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQG 428

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            C  G++  A  +F +M+  G  P  +T   L+  L   G   +A  I ++  + +
Sbjct: 429 FCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 193/392 (49%), Gaps = 7/392 (1%)

Query: 178 VFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
           +F+ M     LP+  +I+F    S+  R  + D   G   +     +  + +  N ++N 
Sbjct: 56  LFESMIQSRPLPS--LIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINC 113

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
             ++     A  +     +   +P+T TF+ LI G    G V +A      M      P+
Sbjct: 114 FCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPN 173

Query: 296 IVTYNTLISGLCRVNEVARGHELL-KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           +VT NTLI+GLC    V     L+ + VK+  E   + +TY  V++  CK G    A  +
Sbjct: 174 VVTVNTLINGLCLKGRVTEALVLIDRMVKYGCE--ANEITYGPVLNRMCKSGNTALALDL 231

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           + +M    IK S V ++++ID   K GN+  A  +   M   G   DVV +SS+I G C 
Sbjct: 232 FRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCN 291

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           +G+ + G K+  EM G+N+ PNV TF+ LI+   KE +L +A+    ++    + P    
Sbjct: 292 DGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTIT 351

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +IDGFCK   + EAN ++  M  K C+P+ VT++ILI  +C   R+   + +F ++ 
Sbjct: 352 YSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS 411

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             G   D +T N+L+    + G  N A  + Q
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQ 443



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 84/158 (53%), Gaps = 4/158 (2%)

Query: 414 RNG----QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           RNG    ++N+ + L + M      P++  F+ L +A+ +    +    F K++  N + 
Sbjct: 42  RNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIE 101

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
              +  N +I+ FC+   +  A  +V    +   +P+ +TF+ LI G C++GR+ EA+++
Sbjct: 102 HNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVAL 161

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ++M+ +   P+ +TVN+LI+ L   G   EA  ++ R
Sbjct: 162 VDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDR 199



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 57/149 (38%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++  LC+ G       +F+ M+    +    +    +     A K D A  L 
Sbjct: 453 SVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLF 512

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  V      YN ++  L K+ +  EA  +F++       P   T+NILI+     
Sbjct: 513 CSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGG 572

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
             V  + E   +M   G + D  T   ++
Sbjct: 573 SGVISSVELIEEMKMRGFAADASTIKMVV 601


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 194/385 (50%), Gaps = 4/385 (1%)

Query: 183 RSDGHLPNS--PMI-EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           R+ G  P S  P+     V    ++G+ D A+ LL +     V ++   YNSLL+  V++
Sbjct: 121 RALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRR 180

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
            +      + +       +    T+ IL+  LS  G++ K      +M +   + D+  Y
Sbjct: 181 KDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLY 240

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
             +I+  CR   V R  E+  E    +   P+  TY  +I+G+CK+G+M+ A  +  +M 
Sbjct: 241 TAVINAYCRAGNVRRASEVFDEC-VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 299

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G+  + + FN +IDG+ + G + +A  ++  M   G   DV T+++L  G CR  ++ 
Sbjct: 300 GRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMA 359

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L   M  K + PN  T+T LI+  CKE  + +ARR  +++     +P    YN ++
Sbjct: 360 EAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMM 419

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG+ K G++ EA     EME+K   PD  T+  L+ GHC+ G++  A+ +F +M   G  
Sbjct: 420 DGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTE 479

Query: 540 PDDITVNSLISCLLKGGMPNEAFRI 564
           P+ +   +LIS L K G   EAF++
Sbjct: 480 PNVVAYTALISGLAKEGRSEEAFQL 504



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 189/393 (48%), Gaps = 1/393 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           ++V+   C+ G  D  + + D M   G   N+      +   +R       + LL     
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
           G +  +   Y  L+++L    +  +   +  E        D + +  +I    R G V++
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A E F +    G  P+  TY  LI+G C++ ++     LL +++ +     + + + ++I
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRG-VGHNQIIFNTMI 314

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            GYC+ G +D A  +   M   GI+    T+N L  G  +V  M  A+ +   M+  G  
Sbjct: 315 DGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVP 374

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+ VT+++LI  +C+ G + +  +L  EM GK   P+V T+ ++++   K+  + +A RF
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            K+++   LVP  + Y  ++ G C  G VD A  +  EM+ +  +P+ V +T LI G   
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK 494

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +GR  EA  +++ ML+ G  PDD   ++L+  L
Sbjct: 495 EGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 175/350 (50%), Gaps = 3/350 (0%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           ++R D+ ++  + LE    N  +  +  TY +++ SL   G    V+ V D M++     
Sbjct: 178 VRRKDDARVQ-ELLEIME-NGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAG 235

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +  +    +++  RAG    A  +  +     +  +   Y  L+N   K    + A  + 
Sbjct: 236 DVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLL 295

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            +        +   FN +I G  R G V  A +    M   G   D+ TYNTL  GLCRV
Sbjct: 296 ADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRV 355

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
           N +A    LL  +  +    P+ VTYT++IS +CK G M +A  ++ EM   G  PS VT
Sbjct: 356 NRMAEAKTLL-HIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVT 414

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +NV++DG+ K G++  AE  R+ M   G +PDV T++SL+ G+C NG+++  LKL +EMK
Sbjct: 415 YNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 474

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            +   PNV  +T LI+ L KE R  +A +    +    L P   +Y+ ++
Sbjct: 475 HRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 141/294 (47%), Gaps = 1/294 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  V+ + C  G       VFD    +G  PN       ++   + G+ +AA+ LL+  +
Sbjct: 240 YTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 299

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  +  ++N++++   +Q   D A+ +     ++  + D +T+N L  GL R+  + 
Sbjct: 300 GRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMA 359

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A    + M   G  P+ VTY TLIS  C+  ++     L +E+  K    P VVTY  +
Sbjct: 360 EAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAM-PSVVTYNVM 418

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GY K G + +A     EM   G+ P   T+  L+ G    G +  A  + E M   G 
Sbjct: 419 MDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGT 478

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
            P+VV +++LI G  + G+  +  +L D+M    L+P+   ++ L+ +L  +NR
Sbjct: 479 EPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNR 532



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 35/264 (13%)

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAV----------------------------- 368
           V+ G+CK G++D A  + +EM   G++ +A+                             
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197

Query: 369 ------TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                 T+ +L+D     G++   E + + M +     DV  ++++I+ YCR G + +  
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRAS 257

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           ++ DE  G  + PN  T+ +LIN  CK  ++  A   L  ++   +     ++N +IDG+
Sbjct: 258 EVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGY 317

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+ G VD A  + A ME+   + D  T+  L  G C   RM EA ++ + M+  G  P+ 
Sbjct: 318 CRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNY 377

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
           +T  +LIS   K G   EA R+ +
Sbjct: 378 VTYTTLISIHCKEGDMVEARRLFR 401



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 72/166 (43%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           ++ TY  ++   C+ G     + +F  M   G +P+       +   I+ G    A+   
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFR 435

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +    + Y SL++        D A+ +F+E     ++P+   +  LI GL++ 
Sbjct: 436 KEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKE 495

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
           G  ++AF+ + DM   G +PD   Y+ L+  L   N     H+ +K
Sbjct: 496 GRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDIHHKQIK 541


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 189/362 (52%), Gaps = 1/362 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           ++G+   A+ LL +     V ++   YNSLL+A  ++ + D    M K       +P   
Sbjct: 155 KSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVG 214

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL+ GLS   ++ K    F +M S   S D+  Y+++I+  CR   V R  E+  E 
Sbjct: 215 TYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDEC 274

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
              +   P+  TY ++I+G+CK+G+M+ A  +  +M   G+  + + FN +IDG+ +   
Sbjct: 275 -VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNM 333

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  ++  M   G   DV T+++L  G  R  ++++   L   M  K + PN  ++T 
Sbjct: 334 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTT 393

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+  C E  + +ARR  +++  N   P    YN ++DG+ K G++ EA     EME+K 
Sbjct: 394 LISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKG 453

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD  ++  L+ GHC+ G++  A+ +F +M + G  P+ +   +LIS L K G   EAF
Sbjct: 454 LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 513

Query: 563 RI 564
           ++
Sbjct: 514 QL 515



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 157/346 (45%), Gaps = 38/346 (10%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           D  K+   F E    NLS +  F  Y+ V+ + C  G       VFD    +G  PN   
Sbjct: 228 DITKVEAVFEEMKSKNLSGDVYF--YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHT 285

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               ++   + G+ +AA+ L++  +   V ++  ++N++++   ++N  D+A+ +     
Sbjct: 286 YGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIME 345

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           ++  + D +T+N L  GL R   + +A      M   G  P+ V+Y TLIS  C   ++ 
Sbjct: 346 KMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMV 405

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
               L +E+       P +VTY  ++ GY K G + +A    NEM   G+          
Sbjct: 406 EARRLFREMAGNGA-EPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGL---------- 454

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
                                    +PD+ ++++L+ G+C NG+++  L+L +EMK +  
Sbjct: 455 -------------------------VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            PN+  +T LI+ L KE R  +A +    +  + L P   +Y+ ++
Sbjct: 490 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 188/345 (54%), Gaps = 6/345 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+      SL+N   ++N   +AV +  +   +  +PD   +N +I  L +   
Sbjct: 151 YEPDRVTIG-----SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  AF+FF ++   G  P++VTY  L++GLC  +  +    LL ++  K + +P+V+TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYS 264

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++  + K GK+ +A  ++ EM    I P  VT++ L++G      +  A  M + M+S 
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G L DVV++++LI+G+C+  ++  G+KL  EM  + L  N  T+  LI    +   ++ A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           + F  Q+ +  + P  + YN ++ G C  G +++A VI  +M+++    D VT+T +I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C  G++ EA S+F  +   G  PD +T  +++S L   G+ +E 
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 199/399 (49%), Gaps = 6/399 (1%)

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMS 225
           ++ L+D++ +  D ++S    P   +++F   +S+ ++  K D    L  +     +   
Sbjct: 63  DIKLNDAIDLFSDMVKSR---PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            + +N ++N          A+ +  +  +L  +PD  T   L+ G  R   V  A     
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M   G  PDIV YN +I  LC+   V    +  KE++ K    P+VVTYT++++G C  
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNS 238

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            +   A  + ++M    I P+ +T++ L+D F K G ++ A+ + E M+     PD+VT+
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           SSL++G C + ++++  ++ D M  K    +V ++  LIN  CK  R+ D  +  +++  
Sbjct: 299 SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             LV     YN +I GF +AG+VD+A    ++M+     PD  T+ IL+ G C  G + +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           A+ IF  M +     D +T  ++I  + K G   EA+ +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 190/397 (47%), Gaps = 1/397 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L + +   T+N+V+   C          +   M   G+ P+   I   V+   R  +   
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  L+ +            YN+++++L K    ++A   FKE  R   +P+  T+  L+ 
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL        A     DM     +P+++TY+ L+    +  +V    EL +E+  +    
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSID 292

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD+VTY+S+++G C   ++D+A  +++ M S G     V++N LI+GF K   +     +
Sbjct: 293 PDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G + + VT+++LI G+ + G +++  +   +M    +SP+++T+ IL+  LC 
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L  A    + ++  ++      Y  VI G CK G V+EA  +   +  K  KPD VT
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           +T ++ G C KG + E  +++ KM + G   +D T++
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 155/301 (51%), Gaps = 3/301 (0%)

Query: 272 SRIGEVK--KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           +R+ ++K   A + F DM      P IV +N L+S + ++ +      L K+++      
Sbjct: 59  TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG-IR 117

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            D+ T+  VI+ +C   ++  A  I  +M   G +P  VT   L++GF +   +  A  +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M+  GY PD+V ++++ID  C+  ++N       E++ K + PNV T+T L+N LC 
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +R +DA R L  +    + P    Y+ ++D F K G V EA  +  EM      PD VT
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           ++ L+ G C+  R+ EA  +F+ M+  GC  D ++ N+LI+   K     +  ++ +  S
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 570 E 570
           +
Sbjct: 358 Q 358


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 194/417 (46%), Gaps = 20/417 (4%)

Query: 152 LNHSFKTYNLVMRS---------------LCEMG-LHDSVQVVFDYMRSDGHLPNSPMIE 195
           + H F  + L++++               LC+   + +++ ++   M   G +PN     
Sbjct: 106 IEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCN 165

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRP---GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
             +       + + A  LL        G  T +   YN++++ L K    D A  + +  
Sbjct: 166 TLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHM 225

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
                + D  T++ +I GL +   V +A      M   G  PD+VTYNT+I GLC+   V
Sbjct: 226 IDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAV 285

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
            R   +L+ +  K    PDVVTY ++I G CK   +D+A G+   M    +KP   T+N 
Sbjct: 286 DRAEGVLQHMIDKG-VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LI G+   G         E M + G  PDVVT+S L+D  C+NG+  +  K+   M  K 
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           + PNV  + IL++       + D    L  +  N + P  +++N V+  + K   +DEA 
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            I + M +    PD VT+ ILI   C  GR+ +A+  FN+M+  G  P+ +  NSL+
Sbjct: 465 HIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLV 521



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 187/368 (50%), Gaps = 12/368 (3%)

Query: 209 AAKGLL--SQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-YMFKEYFRLYSQPDTWTFN 265
           AA GL+  + +R  EV +     N LLN L      DEA+  + +        P+  + N
Sbjct: 111 AAFGLILKTGWRVNEVVI-----NQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCN 165

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFG---CSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            L++GL     V++A E  + M   G   C+P++VTYNT+I GLC+   V R   +L+ +
Sbjct: 166 TLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHM 225

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K     DVVTY+++I G CK   +D+A G+   M   G+KP  VT+N +IDG  K   
Sbjct: 226 IDKG-VKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  AE + + M+  G  PDVVT++++IDG C+   +++   +   M  K++ P++ T+  
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+         +  R L+++    L P    Y+ ++D  CK G   EA  I   M  K 
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            KP+   + IL+ G+  +G + +   + + M+  G +P++   N ++    K  M +EA 
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464

Query: 563 RIMQRASE 570
            I  R S+
Sbjct: 465 HIFSRMSQ 472



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 197/398 (49%), Gaps = 1/398 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++      G    +  + D M ++G  PN+ +    + +  +    D A  + S+  
Sbjct: 412 YGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMS 471

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++     Y  L++AL K    D+AV  F +       P++  FN L+ GL  +   +
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA E F++M   G  P++V +NT++  LC   +V     L+  ++ +    P+V++Y ++
Sbjct: 532 KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME-RVGVRPNVISYNTL 590

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+C  G+ D+A  + + M S G+KP  ++++ L+ G+ K G + +A  +   ML  G 
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P  VT+S+++ G     + ++  +L   M       ++YT+ I++N LCK N +++A +
Sbjct: 651 TPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFK 710

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + L   DL P    +  +ID   K G   +A  + A +      P+ VT+ I++    
Sbjct: 711 IFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNII 770

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            +G + E  ++F  M + GC PD + +N++I  LL  G
Sbjct: 771 QEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRG 808



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 194/443 (43%), Gaps = 34/443 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    D  + V  +M   G  P+       +    +A   D A G+L   
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V      YN L++  +      E V   +E +     PD  T+++L+  L + G+ 
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISG-------------------------------- 305
            +A + FY M   G  P++  Y  L+ G                                
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450

Query: 306 LCRVNEVARGHELLKEVKFKSE--FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           LC   + A   E +      S+   SPDVVTY  +I   CKLG++D A   +N+M + G+
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P++V FN L+ G   V     AE +   M   G  P+VV F++++   C  GQ+    +
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L D M+   + PNV ++  LI   C   R ++A + L  +    L P    Y+ ++ G+C
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G +D A  +  EM  K   P  VT++ ++ G     R  EA  ++  M++ G   D  
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
           T N +++ L K    +EAF+I Q
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQ 713



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 192/403 (47%), Gaps = 1/403 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N+V+ +  +  + D    +F  M   G  P+       + +  + G+ D A    +Q  
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              VT ++ ++NSL+  L   +  ++A  +F E +    +P+   FN ++  L   G+V 
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A      M   G  P++++YNTLI G C         +LL +V       PD+++Y ++
Sbjct: 567 VAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLL-DVMVSVGLKPDLISYDTL 625

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GYCK G++D A  ++ EM   G+ P AVT++ ++ G         A+ +   M+  G 
Sbjct: 626 LRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             D+ T++ +++G C+   +++  K+   +  K+L PN+ TFTI+I+ L K  R  DA  
Sbjct: 686 QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMD 745

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               +  + LVP    Y  ++    + G +DE + +   ME+  C PD V    +I    
Sbjct: 746 LFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLL 805

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +G ++ A +  +K+  +  + +  T + LIS   +    N A
Sbjct: 806 GRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHA 848



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 187/384 (48%), Gaps = 15/384 (3%)

Query: 194 IEFFVSSCIRAGK--CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK---QNNADEAVYM 248
           +E  ++   R+G    D A  L  +  P     S   +N LLN + +    + ++ AV +
Sbjct: 15  LERVIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSL 74

Query: 249 FKEYFRLYS---QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           F    R  S   +PD  T++IL     R+G ++  F  F  +   G   + V  N L++G
Sbjct: 75  FNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNG 134

Query: 306 LCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG- 362
           LC    V    ++L  ++   EF   P+VV+  +++ G C   ++++A  + + M   G 
Sbjct: 135 LCDAKRVDEAMDIL--LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGG 192

Query: 363 --IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
               P+ VT+N +IDG  K   +  AE + + M+  G   DVVT+S++IDG C+   +++
Sbjct: 193 GNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDR 252

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              +   M  K + P+V T+  +I+ LCK   ++ A   L+ +    + P    YN +ID
Sbjct: 253 AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 312

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CKA  VD A+ ++  M +K  KPD  T+  LI G+   G   E +    +M   G  P
Sbjct: 313 GLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDP 372

Query: 541 DDITVNSLISCLLKGGMPNEAFRI 564
           D +T + L+  L K G   EA +I
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKI 396



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 155/355 (43%), Gaps = 37/355 (10%)

Query: 145 FSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           FSR++   L+    TY +++ +LC++G  D   + F+ M +DG  PNS +    V     
Sbjct: 467 FSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCT 526

Query: 204 AGKCDAAKGLLSQF-----RPGEVTMSTFM------------------------------ 228
             + + A+ L  +      RP  V  +T M                              
Sbjct: 527 VDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVIS 586

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN+L+         DEA  +      +  +PD  +++ L++G  + G +  A+  F +M 
Sbjct: 587 YNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREML 646

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G +P  VTY+T++ GL      +   EL   +  KS    D+ TY  +++G CK   +
Sbjct: 647 RKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM-IKSGQQWDIYTYNIILNGLCKTNCV 705

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  I+  + S  ++P+ +TF ++ID   K G    A  +   + S G +P+VVT+  +
Sbjct: 706 DEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIM 765

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           +    + G L++   L   M+    +P+      +I +L     +  A  +L ++
Sbjct: 766 MKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 133/299 (44%), Gaps = 1/299 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N +M +LC  G     Q + D M   G  PN       +     AG+ D A  LL    
Sbjct: 552 FNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMV 611

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +      Y++LL    K    D A  +F+E  R    P   T++ ++QGL       
Sbjct: 612 SVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFS 671

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A E + +M   G   DI TYN +++GLC+ N V    ++ + +  K +  P+++T+T +
Sbjct: 672 EAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK-DLRPNIITFTIM 730

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I    K G+   A  ++  + S G+ P+ VT+ +++    + G +   + +   M   G 
Sbjct: 731 IDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGC 790

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            PD V  +++I      G++ +      ++   N S    T ++LI+   +E   N A+
Sbjct: 791 TPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAK 849



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 1/267 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++   C  G  D    + D M S G  P+    +  +    + G+ D A  L  + 
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREM 645

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               VT     Y+++L  L       EA  ++    +   Q D +T+NI++ GL +   V
Sbjct: 646 LRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCV 705

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+ F  + S    P+I+T+  +I  L +        +L   +       P+VVTY  
Sbjct: 706 DEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG-LVPNVVTYCI 764

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++    + G +D+   ++  M   G  P +V  N +I      G ++ A     ++    
Sbjct: 765 MMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN 824

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           +  +  T S LI  + R    N    L
Sbjct: 825 FSLEASTTSLLISLFSREEYKNHAKSL 851



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 3/233 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ L     +Y+ ++R  C+ G  D+   +F  M   G  P +      +       + 
Sbjct: 611 VSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRF 670

Query: 208 DAAKGL-LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
             AK L L+  + G+     + YN +LN L K N  DEA  +F+       +P+  TF I
Sbjct: 671 SEAKELYLNMIKSGQ-QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I  L + G  K A + F  + S G  P++VTY  ++  + +   +     L   ++ KS
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAME-KS 788

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
             +PD V   ++I      G++ +A    ++++       A T ++LI  F +
Sbjct: 789 GCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 9/167 (5%)

Query: 414 RNGQL--NQGLKLCDEMKGKNLSPNVYTFTILIN----ALCKENRLNDARRFLKQLKW-- 465
           R+G L  +  LKL DE+       +V  F  L+N    A C          F +  +   
Sbjct: 24  RSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACS 83

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           N + P    Y+ +   FC+ G ++        + +   + ++V    L+ G C   R+ E
Sbjct: 84  NKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDE 143

Query: 526 AISIF-NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           A+ I   +M   GC P+ ++ N+L+  L       EA  ++   +ED
Sbjct: 144 AMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 189/362 (52%), Gaps = 1/362 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           ++G+   A+ LL +     V ++   YNSLL+A  ++ + D    M K       +P   
Sbjct: 79  KSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVG 138

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL+ GLS   ++ K    F +M S   S D+  Y+++I+  CR   V R  E+  E 
Sbjct: 139 TYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDEC 198

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
              +   P+  TY ++I+G+CK+G+M+ A  +  +M   G+  + + FN +IDG+ +   
Sbjct: 199 -VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNM 257

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  ++  M   G   DV T+++L  G  R  ++++   L   M  K + PN  ++T 
Sbjct: 258 VDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTT 317

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+  C E  + +ARR  +++  N   P    YN ++DG+ K G++ EA     EME+K 
Sbjct: 318 LISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKG 377

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             PD  ++  L+ GHC+ G++  A+ +F +M + G  P+ +   +LIS L K G   EAF
Sbjct: 378 LVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAF 437

Query: 563 RI 564
           ++
Sbjct: 438 QL 439



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 164/355 (46%), Gaps = 34/355 (9%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ +       D V  +   M ++G  P        V     A      + +  + +
Sbjct: 105 YNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMK 164

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++   + Y+S++NA  +  N   A  +F E      +P+  T+  LI G  +IG+++
Sbjct: 165 SKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQME 224

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL-------------------- 318
            A     DM   G   + + +NT+I G CR N V +  E+                    
Sbjct: 225 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 284

Query: 319 --------------LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                         L  +  +    P+ V+YT++IS +C  G M +A  ++ EM   G +
Sbjct: 285 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 344

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           PS VT+NV++DG+ K G++  AE  +  M   G +PD+ ++++L+ G+C NG+++  L+L
Sbjct: 345 PSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRL 404

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
            +EMK +   PN+  +T LI+ L KE R  +A +    +  + L P   +Y+ ++
Sbjct: 405 FEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 6/242 (2%)

Query: 330 PDVVTYTS---VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           PD VT  S   V+ GYCK G++  A  + +EM   G+K +A+ +N L+D + +  +    
Sbjct: 62  PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 121

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             M + M + G  P V T++ L+DG      + +   + +EMK KNLS +VY ++ +INA
Sbjct: 122 AEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINA 181

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            C+   +  A     +   N + P    Y  +I+GFCK G ++ A ++V +M+ +    +
Sbjct: 182 YCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN 241

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FR 563
           ++ F  +I G+C K  + +A+ I   M ++G   D  T N+L   L +    +EA    R
Sbjct: 242 QIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLR 301

Query: 564 IM 565
           IM
Sbjct: 302 IM 303


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 187/381 (49%), Gaps = 6/381 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH---LPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +YN V+ +LC  G HD    +   M  + H    PN+      + +       D A GLL
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              R   V      Y +L+  L      D+AV +  E      +P+   ++ L+QG  + 
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  +   + F +M   G  PD+V Y  LI  LC+V +  + H ++ ++  +    P+VVT
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM-DMMVRRGLEPNVVT 257

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I+  CK G + +A G+  +M+  G+ P  VT+N LI G   V  M  A ++ E M+
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 395 SFGYL--PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
               +  P+VVTF+S+I G C  G++ Q  ++   M+      N+ T+ +LI  L + ++
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A   + ++    L P  F Y+ +I GFCK   VD A  +++ M ++  +P+   +  
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 513 LIIGHCMKGRMVEAISIFNKM 533
           L++  C +G M  A ++FN+M
Sbjct: 438 LLVAMCEQGMMERARNLFNEM 458



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 205/422 (48%), Gaps = 3/422 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++R LC+    D    +   M   G  PN  +    +    ++G+ +    +  + 
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM 211

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     MY  L+++L K   A +A  +     R   +P+  T+N+LI  + + G V
Sbjct: 212 SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSV 271

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYT 336
           K+A      M   G +PD+VTYNTLI GL  V E+     LL+E V+ K+   P+VVT+ 
Sbjct: 272 KEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFN 331

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           SVI G C +G+M +A  +   M   G   + VT+N+LI G  +V  +  A  + + M S 
Sbjct: 332 SVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL 391

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T+S LI G+C+  Q+++   L   M+ + + P ++ +  L+ A+C++  +  A
Sbjct: 392 GLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERA 451

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R    ++  N+       Y+ +I G CKAG++  A  ++  + ++   PD VT++I+I  
Sbjct: 452 RNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
               G M  A  +  +M   G  PD    +SLI      G  N+   ++ R    +N+ L
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI-REMITKNIAL 569

Query: 577 PS 578
            S
Sbjct: 570 DS 571



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 39/358 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C                                   + G    A G+L + 
Sbjct: 257 TYNVLINCMC-----------------------------------KEGSVKEAIGVLKKM 281

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQGLSRIG 275
               V      YN+L+  L      DEA+++ +E  R  +  +P+  TFN +IQGL  IG
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +++AF+    M   GC  ++VTYN LI GL RV++V +  EL+ E+       PD  TY
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG-LEPDSFTY 400

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           + +I G+CK+ ++D+A  + + M   GI+P    +  L+    + G M  A  +   M  
Sbjct: 401 SILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-D 459

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
             +  DVV +S++I G C+ G L    +L   +  + L+P+  T++I+IN   K   +  
Sbjct: 460 NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEA 519

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           A   LKQ+  +  +P   +++ +I G+   G +++   ++ EM  K    D    + L
Sbjct: 520 ANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 4/274 (1%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKAT 352
           D V+YNT+++ LCR     R   LL+ +  +   +  P+ V+YT ++   C     D+A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+   M S G++   VT+  LI G      +  A  +   M   G  P+VV +SSL+ GY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C++G+     K+  EM  K + P+V  +T LI++LCK  +   A   +  +    L P  
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +I+  CK G+V EA  ++ +M EK   PD VT+  LI G      M EA+ +  +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 533 MLRIG--CAPDDITVNSLISCLLKGGMPNEAFRI 564
           M+R      P+ +T NS+I  L   G   +AF++
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 157/363 (43%), Gaps = 70/363 (19%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++ SLC++G       V D M   G  PN       ++   + G    A G+L +  
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQGLSRIG- 275
              V      YN+L+  L      DEA+++ +E  R  +  +P+  TFN +IQGL  IG 
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGR 342

Query: 276 ----------------------------------EVKKAFEFFYDMGSFGCSPDIVTYNT 301
                                             +V+KA E   +M S G  PD  TY+ 
Sbjct: 343 MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402

Query: 302 LISGLCRVNEVARGHELLKEVK---------------------------------FKSEF 328
           LI G C++ +V R  +LL  ++                                   + F
Sbjct: 403 LIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNF 462

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             DVV Y+++I G CK G +  A  +   +   G+ P AVT++++I+ F K G+M +A  
Sbjct: 463 PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANG 522

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + ++M + G+LPDV  F SLI GY   G++N+ L+L  EM  KN++ +    + L  +L 
Sbjct: 523 VLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582

Query: 449 KEN 451
             N
Sbjct: 583 ASN 585


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 212/454 (46%), Gaps = 35/454 (7%)

Query: 137 KLGLKFLEF--SRVNLSLNHSFKTYNL----------------VMRSLCEMGLHDSVQVV 178
           +L LKFL++   +  L L H    Y L                ++R LC+MG+    + +
Sbjct: 91  RLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGI--GSKSI 148

Query: 179 FDYMRSDGHLPNS--PMIEFFVSSCIRAGKCDAAK------GLLSQFRPGEVTMSTFMYN 230
           F  +     L NS   + +  +   ++ G  D A       GL+  F+P     S +  N
Sbjct: 149 FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVG-FKP-----SVYTCN 202

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            +L ++VK    +    +F+E       P+  TFNILI GL   G +KKA      M   
Sbjct: 203 MILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEEN 262

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  P IVTYNTL++  C+        EL+  +  K     DV TY   I   C   +  K
Sbjct: 263 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG-IEADVCTYNVFIDNLCTNHRSAK 321

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +  +M    I P+ VT+N LI+GF K G +  A  +   M  F   P+ VT+++LI 
Sbjct: 322 AYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 381

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G+C  G   + L+L D M+   L  N  T+  L+N LCK  +   A+R L++++ ND+V 
Sbjct: 382 GHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVV 441

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  +IDG CK G +DEA  +V  M +    PD +T++ LI G C  G +  A  I 
Sbjct: 442 GHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 501

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +M R G   + I  ++LI    + G   EA ++
Sbjct: 502 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 207/417 (49%), Gaps = 1/417 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G + +   + DYM   G   +      F+ +     +   A  LL + 
Sbjct: 270 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 329

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   ++ +   YN+L+N  VK+     A  +F E  +    P+  T+N LI G   +G+ 
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M + G   + VTY TL++GLC+  +      LL+ ++  ++     + YT 
Sbjct: 390 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRV-NDMVVGHIAYTV 448

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G +D+A  +   M   G+ P  +T++ LI+GF +VGN+ SA+ +  RM   G
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + + +S+LI  +C++G + + +K+   M       + +T  +L+++LC++ +L +A 
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +FL  +    LVP    Y+ +I+G+   G+   A     +M +    P   T+  L+ G 
Sbjct: 569 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           C  G +VEA    N++  I  A D +  N+L++   K G  +EA  +  +  ++  L
Sbjct: 629 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 685



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 200/412 (48%), Gaps = 1/412 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            ++L++R   + G+ D     F+ +   G  P+       ++S ++  + +    L  + 
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   +N L+N L  + N  +A  + K+       P   T+N L+    + G  
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A E    M   G   D+ TYN  I  LC  +  A+ + LLK+++ K   SP+ VTY +
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR-KEMISPNEVTYNT 343

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+ K GK+  A  ++NEM+   + P+ VT+N LI G   VG+   A  + + M + G
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + VT+ +L++G C++ +     +L + M+  ++      +T+LI+ LCK   L++A 
Sbjct: 404 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 463

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + +  +  + + P    Y+ +I+GFC+ GN+  A  I+  M       +K+ ++ LI   
Sbjct: 464 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 523

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           C  G + EA+ ++  M   G   D  T N L+S L + G   EA + +   S
Sbjct: 524 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 575



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 192/408 (47%), Gaps = 1/408 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T N+++ S+ +    + V  +F  M   G  PN       ++     G    A  LL
Sbjct: 197 SVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLL 256

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            Q        +   YN+LLN   K+     A+ +         + D  T+N+ I  L   
Sbjct: 257 KQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTN 316

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
               KA+     M     SP+ VTYNTLI+G  +  ++    ++  E+  K + SP+ VT
Sbjct: 317 HRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS-KFDLSPNCVT 375

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G+C +G  ++A  + + M + G++ + VT+  L++G  K      A+ + ERM 
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
               +   + ++ LIDG C+NG L++ ++L   M    ++P+V T++ LIN  C+   + 
Sbjct: 436 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 495

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A+  + ++  + LV    +Y+ +I  FC+ GNV EA  + A M       D  T  +L+
Sbjct: 496 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 555

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              C  G++ EA      M RIG  P+ IT + +I+     G P  AF
Sbjct: 556 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAF 603



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 193/458 (42%), Gaps = 42/458 (9%)

Query: 159  YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL-SQ 216
            YN ++   C+ G LH++V  +FD M  +  LP+S      ++   R GK   A  L  + 
Sbjct: 656  YNTLLAETCKSGNLHEAV-ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA 714

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               G +  +  MY  L++ L K  +   A Y F+E  +  + PDT  FN +I   SR G+
Sbjct: 715  MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 774

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + KA +FF  M  +G  P++ TYN L+ G  +   + R   L   +  +  F PD +T+ 
Sbjct: 775  MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF-PDKLTFH 833

Query: 337  SVISG-----------------------------------YCKLGKMDKATGIYNEMNSC 361
            S+I G                                   Y + GKM KA  + N MN+ 
Sbjct: 834  SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 893

Query: 362  GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            G+ P   T+N + +G  K      +  +   ML  G +P    + +LI+G CR G +   
Sbjct: 894  GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 953

Query: 422  LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             KL DEM+      +    + ++  L    +  DA   L  +    L+P    +  ++  
Sbjct: 954  FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHR 1013

Query: 482  FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            FC+   + EA  +   ME    K D V + +LI+G C  G    A  ++ +M      P+
Sbjct: 1014 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1073

Query: 542  DITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
              T   L+  +      N   +  +  ++ Q   L SW
Sbjct: 1074 ITTYAVLVDAI---SAANNLIQGEKLLTDLQERGLISW 1108



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 193/431 (44%), Gaps = 9/431 (2%)

Query: 141 KFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           KFL   SR+ L  N    TY+ ++     +G   +    FD M   G  P+       + 
Sbjct: 569 KFLCHMSRIGLVPNSI--TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 626

Query: 200 SCIRAGKCDAAKGLLSQFR--PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
              + G    AK  L++    PG V   + MYN+LL    K  N  EAV +F +  +   
Sbjct: 627 GLCKGGNLVEAKKFLNRLHYIPGAV--DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 684

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFF-YDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            PD++T++ L+ GL R G+   A   F   MG     P+ V Y  L+ GL +        
Sbjct: 685 LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 744

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
              +E+  K    PD V + ++I    + G+M KA   ++ M   G+ P+  T+N+L+ G
Sbjct: 745 YFFEEM-MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHG 803

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K   ++    +   M+  G  PD +TF SLI G  ++G  + G+KL  +M  +    +
Sbjct: 804 FSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 863

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +TF ILIN   +  ++  A   +  +    + P    YN + +G  K     E+ V++ 
Sbjct: 864 QFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLH 923

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM E    P    +  LI G C  G +  A  + ++M  +G    ++  ++++  LL  G
Sbjct: 924 EMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCG 983

Query: 557 MPNEAFRIMQR 567
              +A  ++  
Sbjct: 984 KTEDAMLVLDH 994



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 186/414 (44%), Gaps = 2/414 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++ + C+ G       V+  M  +GH  +       VSS  R GK   A+  L    
Sbjct: 516 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 575

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  ++  Y+ ++N      +   A   F +  +    P  +T+  L++GL + G + 
Sbjct: 576 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLV 635

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A +F   +     + D V YNTL++  C+   +     L  ++  ++   PD  TY+S+
Sbjct: 636 EAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM-VQNNVLPDSYTYSSL 694

Query: 339 ISGYCKLGKMDKATGIY-NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++G C+ GK   A  ++   M    + P+ V +  L+DG  K G+  +A Y  E M+  G
Sbjct: 695 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 754

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD V F+++ID   R GQ+ +       M+   + PN+ T+ IL++   K+  L    
Sbjct: 755 TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYL 814

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +    + P    ++ +I G  K+G  D    ++ +M  +    D+ TF ILI  +
Sbjct: 815 SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 874

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
              G+M +A  + N M  +G  PD  T N + + L K     E+  ++    E+
Sbjct: 875 SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 928



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 191/413 (46%), Gaps = 6/413 (1%)

Query: 155  SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            SF TY  +++ LC+ G     +   + +       +S M    ++   ++G    A  L 
Sbjct: 617  SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 676

Query: 215  SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSR 273
             +     V   ++ Y+SLL  L ++  A  AV +F     R    P+   +  L+ GLS+
Sbjct: 677  DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSK 736

Query: 274  IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             G  K AF FF +M   G  PD V +N +I    R  ++ + ++    +++     P++ 
Sbjct: 737  AGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG-VCPNLA 795

Query: 334  TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            TY  ++ G+ K   + +   +Y+ M   GI P  +TF+ LI G  K G       +  +M
Sbjct: 796  TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 855

Query: 394  LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            +  G L D  TF+ LI+ Y  +G++ +   L + M    + P+  T+  + N L K++  
Sbjct: 856  IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF 915

Query: 454  NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             ++   L ++  N ++PK   Y  +I+G C+ G++  A  +  EME       +V  + +
Sbjct: 916  RESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 975

Query: 514  IIG--HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            + G  HC  G+  +A+ + + MLR+   P   T  +L+    +     EA ++
Sbjct: 976  VRGLLHC--GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 1/309 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            F++LI+   + G +  A E F  +G  G  P + T N +++ + +         L +E+
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K    P+V T+  +I+G C  G + KA  +  +M   G  P+ VT+N L++ + K G 
Sbjct: 225 SDKG-ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
             +A  + + M+  G   DV T++  ID  C N +  +   L  +M+ + +SPN  T+  
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LIN   KE ++  A +   ++   DL P    YN +I G C  G+ +EA  ++  ME   
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            + ++VT+  L+ G C   +   A  +  +M         I    LI  L K GM +EA 
Sbjct: 404 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 463

Query: 563 RIMQRASED 571
           +++    +D
Sbjct: 464 QLVGNMYKD 472


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 178/359 (49%), Gaps = 20/359 (5%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P  VT     +N+LL+ L  ++   EA+ +F +      +P+  TF  L+ GL R G 
Sbjct: 46  FHPTLVT-----FNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGR 96

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A      M   G  P+ +TY T++ G+C++ +      LL++++  S   PDVV Y+
Sbjct: 97  VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYS 156

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G  K G+   A  ++ EM   GI P  VT++ +I+GF   G    A+ + + ML  
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PDVVTFS LI+   + G LN    L  EM    + PNV T   L++ LC   +L DA
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276

Query: 457 RRFLKQLK-----------WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
               K ++           +N + P    YN +I G    G   EA  +  EM  +   P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           D VT++ +I G C + R+ EA  +F+ M     +P+ +T N+LI+   K GM ++   +
Sbjct: 337 DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 209/429 (48%), Gaps = 18/429 (4%)

Query: 137 KLGLKFLEFSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL      F ++  L  + +  T+N ++  LC   + D V    D        PN     
Sbjct: 30  KLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC---VEDRVSEALDLFHQMCK-PNVVTFT 85

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             ++   R G+   A  LL +     +  +   Y ++++ + K  +   A+ + ++   L
Sbjct: 86  TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145

Query: 256 -YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
            + +PD   ++ +I GL + G    A   F +M   G  PDIVTY+ +I+G C   + + 
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSE 205

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              LL+E+  + + SPDVVT++ +I+   K G ++ A  +  EM S G+ P+ VT N L+
Sbjct: 206 AQRLLQEMLVR-KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264

Query: 375 DGFGKVGNMVSA----EYMRERMLSF-------GYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           DG    G +  A    + M++ M+         G  PDV T++ LI G    G+  +  +
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEE 324

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L +EM  + + P+  T++ +IN LCK++RL++A +    +      P    +N +I G+C
Sbjct: 325 LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC 384

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           KAG VD+   +  EM  +    + +T+  LI G    G +  ++ IF +M+  G  PD I
Sbjct: 385 KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444

Query: 544 TVNSLISCL 552
           T+ ++++ L
Sbjct: 445 TIRNMLTGL 453



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 178/362 (49%), Gaps = 18/362 (4%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +P  VT +T M     N L ++    EAV +         QP+  T+  ++ G+ ++G+ 
Sbjct: 78  KPNVVTFTTLM-----NGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 278 KKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             A      M       PD+V Y+ +I GL +         L  E++ K  F PD+VTY+
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIF-PDIVTYS 191

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G+C  GK  +A  +  EM    I P  VTF+ LI+   K G++ SA+ + + M+S 
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-----------NLSPNVYTFTILIN 445
           G  P+VVT ++L+DG C +G+L   L++   M+              + P+V T+ ILI+
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L  E +  +A    +++    +VP    Y+ +I+G CK   +DEA  +   M  K   P
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 371

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VTF  LI G+C  G + + + +F +M R G   + IT  +LI    K G  N +  I 
Sbjct: 372 NIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIF 431

Query: 566 QR 567
           Q 
Sbjct: 432 QE 433



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 179/388 (46%), Gaps = 13/388 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +M  LC  G       + D M  DG  PN       V    + G   +A  LL + 
Sbjct: 83  TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 142

Query: 218 RP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +     +Y+++++ L K     +A  +F E       PD  T++ +I G    G+
Sbjct: 143 EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGK 202

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A     +M     SPD+VT++ LI+ L +  ++    +LL+E+   S   P+VVT  
Sbjct: 203 WSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM-ISSGVCPNVVTCN 261

Query: 337 SVISGYCKLGKMDKATGIYNEMNSC-----------GIKPSAVTFNVLIDGFGKVGNMVS 385
           +++ G C  GK+  A  ++  M              G++P   T+N+LI G    G  + 
Sbjct: 262 TLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLE 321

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           AE + E M   G +PD VT+SS+I+G C+  +L++  ++ D M  K+ SPN+ TF  LI 
Sbjct: 322 AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             CK   ++D      ++    +V     Y  +I GF K GN++ +  I  EM      P
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYP 441

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKM 533
           D +T   ++ G   K  +  A+++  ++
Sbjct: 442 DTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 178/352 (50%), Gaps = 52/352 (14%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D ++FNILI+      ++  A   F  +   G  P +VT+NTL+ GLC  + V+   +L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDL- 72

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
               F     P+VVT+T++++G C+ G++ +A  + + M   G++P+ +T+  ++DG  K
Sbjct: 73  ----FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 128

Query: 380 VGNMVSAEYMRERMLSF------------------------------------GYLPDVV 403
           +G+ VSA  +  +M                                       G  PD+V
Sbjct: 129 MGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV 188

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+S +I+G+C +G+ ++  +L  EM  + +SP+V TF+ LINAL KE  LN A+  L+++
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-----------CKPDKVTFTI 512
             + + P     N ++DG C +G + +A  +   M++              +PD  T+ I
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNI 308

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           LI G   +G+ +EA  ++ +M   G  PD +T +S+I+ L K    +EA ++
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 162/353 (45%), Gaps = 11/353 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  +C+MG   S   +   M    H+ P+  +    +    + G+   A+ L  +
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +      Y+ ++N         EA  + +E       PD  TF+ LI  L + G+
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK-------EVKFKSEFS 329
           +  A +   +M S G  P++VT NTL+ GLC   ++    E+ K       ++     F+
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 330 ---PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PDV TY  +ISG    GK  +A  +Y EM   GI P  VT++ +I+G  K   +  A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             M + M S  + P++VTF++LI GYC+ G ++ GL+L  EM  + +  N  T+  LI  
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
             K   +N +    +++  + + P       ++ G      +  A  ++ E++
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 5/247 (2%)

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +K   +   D+ ++  +I  +C   K+  A   + ++   G  P+ VTFN L+ G     
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +  +M      P+VVTF++L++G CR G++ + + L D M    L PN  T+ 
Sbjct: 65  RVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 442 ILINALCKENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            +++ +CK      A   L+++ + + + P   +Y+ +IDG  K G   +A  +  EM++
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K   PD VT++ +I G C  G+  EA  +  +ML    +PD +T + LI+ L+K G  N 
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 561 AFRIMQR 567
           A  ++Q 
Sbjct: 241 AQDLLQE 247



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 4/141 (2%)

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
           G  +  ++Y+F ILI   C  ++L  A     +L      P    +N ++ G C    V 
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           EA  +  +M    CKP+ VTFT L+ G C +GR+VEA+++ ++M+  G  P+ IT  +++
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 550 SCLLKGGMPNEAFRIMQRASE 570
             + K G    A  ++++  E
Sbjct: 124 DGMCKMGDTVSALNLLRKMEE 144



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 87/191 (45%), Gaps = 7/191 (3%)

Query: 141 KFLEFSRVNLSLNHSF-------KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           K ++ S +++   H+F       +TYN+++  L   G     + +++ M   G +P++  
Sbjct: 281 KAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVT 340

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               ++   +  + D A  +         + +   +N+L+    K    D+ + +F E  
Sbjct: 341 YSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMG 400

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           R     +  T+  LI+G  ++G +  + + F +M S G  PD +T   +++GL    E+ 
Sbjct: 401 RRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 460

Query: 314 RGHELLKEVKF 324
           R   +L+E++ 
Sbjct: 461 RALAMLEELQM 471


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 170/348 (48%), Gaps = 1/348 (0%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G+ P++      ++     G+   A  L+ +        +    N+L+N L       +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           V +         QP+  T+  +++ + + G+   A E    M       D V Y+ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           LC+   +     L  E++ K  F  D++ YT++I G+C  G+ D    +  +M    I P
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             V F+ LID F K G +  AE + + M+  G  PD VT++SLIDG+C+  QL++   + 
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K   PN+ TF ILIN  CK N ++D     +++    +V     YN +I GFC+ 
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           G ++ A  +  EM  +R +PD V++ IL+ G C  G   +A+ IF K+
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 212/441 (48%), Gaps = 12/441 (2%)

Query: 137 KLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL L F    ++  L       T++ ++  LC  G       + D M   GH P    + 
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 196 FFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             V+     GK   A  L+ +     F+P EVT     Y  +L  + K      A+ + +
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT-----YGPVLKVMCKSGQTALAMELLR 236

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           +      + D   ++I+I GL + G +  AF  F +M   G   DI+ Y TLI G C   
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
               G +LL+++  K + +PDVV ++++I  + K GK+ +A  ++ EM   GI P  VT+
Sbjct: 297 RWDDGAKLLRDM-IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
             LIDGF K   +  A +M + M+S G  P++ TF+ LI+GYC+   ++ GL+L  +M  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + +  +  T+  LI   C+  +L  A+   +++    + P    Y  ++DG C  G  ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  I  ++E+ + + D   + I+I G C   ++ +A  +F  +   G  PD  T N +I 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535

Query: 551 CLLKGGMPNEAFRIMQRASED 571
            L K G  +EA  + ++  ED
Sbjct: 536 GLCKKGSLSEADLLFRKMEED 556



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 201/419 (47%), Gaps = 1/419 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V +    +  T N ++  LC  G      ++ D M   G  PN       +    ++G+ 
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  LL +    ++ +    Y+ +++ L K  + D A  +F E      + D   +  L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+G    G      +   DM     +PD+V ++ LI    +  ++    EL KE+  +  
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM-IQRG 347

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SPD VTYTS+I G+CK  ++DKA  + + M S G  P+  TFN+LI+G+ K   +    
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +M   G + D VT+++LI G+C  G+L    +L  EM  + + P++ ++ IL++ L
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C       A    ++++ + +     +YN +I G C A  VD+A  +   +  K  KPD 
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            T+ I+I G C KG + EA  +F KM   G +P+  T N LI   L  G   ++ ++++
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 203/437 (46%), Gaps = 25/437 (5%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           + ++FSR+  S+    K Y+LV+  LC+             M   G   N   +   ++ 
Sbjct: 71  RLIDFSRL-FSVVARTKQYDLVL-DLCKQ------------MELKGIAHNLYTLSIMINC 116

Query: 201 CIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           C R  K   A   + +     + P  VT ST     L+N L  +    EA+ +      +
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFST-----LINGLCLEGRVSEALELVDRMVEM 171

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +P   T N L+ GL   G+V  A      M   G  P+ VTY  ++  +C+  + A  
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            ELL++++ + +   D V Y+ +I G CK G +D A  ++NEM   G K   + +  LI 
Sbjct: 232 MELLRKME-ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           GF   G       +   M+     PDVV FS+LID + + G+L +  +L  EM  + +SP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +  T+T LI+  CKEN+L+ A   L  +      P    +N +I+G+CKA  +D+   + 
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M  +    D VT+  LI G C  G++  A  +F +M+     PD ++   L+  L   
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 556 GMPNEAFRIMQRASEDQ 572
           G P +A  I ++  + +
Sbjct: 471 GEPEKALEIFEKIEKSK 487



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 199/408 (48%), Gaps = 4/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V++ +C+ G       +   M       ++      +    + G  D A  L ++ 
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     +Y +L+         D+   + ++  +    PD   F+ LI    + G++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E   +M   G SPD VTY +LI G C+ N++ + + +L ++       P++ T+  
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNI 392

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK   +D    ++ +M+  G+    VT+N LI GF ++G +  A+ + + M+S  
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V++  L+DG C NG+  + L++ ++++   +  ++  + I+I+ +C  ++++DA 
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I G CK G++ EA+++  +MEE    P+  T+ ILI  H
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL---LKGGMPNEAF 562
             +G   ++  +  ++ R G + D  T+   +S L   LK G   + F
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVF 620



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 176/391 (45%), Gaps = 69/391 (17%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQP----------------------------- 259
           Y   L + +     D+AV +F+E  R   +P                             
Sbjct: 40  YRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME 99

Query: 260 ------DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVN 310
                 + +T +I+I    R  ++  AF     +   G  PD VT++TLI+GLC   RV+
Sbjct: 100 LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVS 159

Query: 311 E--------VARGHE-----------------------LLKEVKFKSEFSPDVVTYTSVI 339
           E        V  GH+                       LL +   ++ F P+ VTY  V+
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
              CK G+   A  +  +M    IK  AV ++++IDG  K G++ +A  +   M   G+ 
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            D++ +++LI G+C  G+ + G KL  +M  + ++P+V  F+ LI+   KE +L +A   
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            K++    + P    Y  +IDGFCK   +D+AN ++  M  K C P+  TF ILI G+C 
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              + + + +F KM   G   D +T N+LI 
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 211/499 (42%), Gaps = 81/499 (16%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRV------NLSLNHSFKTYN-------- 160
           + +C+      ++E++++++  K+ L  +++S +      + SL+++F  +N        
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279

Query: 161 -------LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
                   ++R  C  G  D    +   M      P+       +   ++ GK   A+ L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK----------------------- 250
             +     ++  T  Y SL++   K+N  D+A +M                         
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399

Query: 251 --------EYFRLYSQ----PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                   E FR  S      DT T+N LIQG   +G+++ A E F +M S    PDIV+
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y  L+ GLC   E  +  E+ ++++ KS+   D+  Y  +I G C   K+D A  ++  +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G+KP   T+N++I G  K G++  A+ +  +M   G+ P+  T++ LI  +   G  
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578

Query: 419 NQGLKLCDEMKGKNLS----------------------PNVYTFTILINALCKENRLN-- 454
            +  KL +E+K    S                      P+V+TFT L+   C E   +  
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVY 638

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA    K +K     P    YN VI G      + +   ++ +M E+ C+P+ VT +  I
Sbjct: 639 DAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFI 698

Query: 515 IGHCMKGRMVEAISIFNKM 533
            G C +     AI +  KM
Sbjct: 699 SGLCKQDLHGSAILLLRKM 717



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 148/334 (44%), Gaps = 25/334 (7%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +T+N+++   C+  L D    +F  M   G + ++      +      GK + AK L 
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     V      Y  LL+ L      ++A+ +F++  +   + D   +NI+I G+   
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            +V  A++ F  +   G  PD+ TYN +I GLC+   ++    L ++++ +   SP+  T
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME-EDGHSPNGCT 564

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGI----------------------KPSAVTFNV 372
           Y  +I  +   G   K+  +  E+  CG                       +P   TF  
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTT 624

Query: 373 LIDGF--GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           L+  F   +  ++  A  + + M + GY P+VVT++++I G      ++Q   + D+M  
Sbjct: 625 LLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFE 684

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +   PN  T +  I+ LCK++    A   L++++
Sbjct: 685 RGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 135/299 (45%), Gaps = 25/299 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  CE+G  +  + +F  M S    P+    +  +      G+ + A  +  + 
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++ +   +YN +++ +   +  D+A  +F        +PD  T+NI+I GL + G +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-------------- 323
            +A   F  M   G SP+  TYN LI       +  +  +L++E+K              
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFA 603

Query: 324 -------FKSEFSPDVVTYTSVISGYC--KLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
                   K+   PDV T+T+++  +C  +   +  A  ++  M + G KP+ VT+N +I
Sbjct: 604 LSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVI 663

Query: 375 DGFGKVGNMVS-AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
            G    GNM+S    + ++M   G  P+ VT S+ I G C+       + L  +M+  N
Sbjct: 664 KGLLN-GNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 35/171 (20%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P ++ FS L     R  Q +  L LC +M+ K ++ N+YT +I+IN  C+  +L+ A   
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLA--- 126

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
                                 F   G + +             +PD VTF+ LI G C+
Sbjct: 127 ----------------------FSAMGKIIKLGY----------EPDTVTFSTLINGLCL 154

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +GR+ EA+ + ++M+ +G  P  IT+N+L++ L   G  ++A  ++ R  E
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 48/268 (17%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEF----------SRVNLS-----------LNHS 155
           LC+   P  +LE+ ++++  K+ L    +          S+V+ +           +   
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            KTYN+++  LC+ G      ++F  M  DGH PN       + + +  G    +  L+ 
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586

Query: 216 QF-RPG-EVTMST--------------------FMYNSLLNALVKQNNAD--EAVYMFKE 251
           +  R G  V  ST                    F + +LL     + NA   +A  +FK 
Sbjct: 587 EIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKN 646

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
              +  +P+  T+N +I+GL     + +       M   GC P+ VT +T ISGLC+ + 
Sbjct: 647 MKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDL 706

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVI 339
                 LL++++  +E   DV T   ++
Sbjct: 707 HGSAILLLRKMENDNE---DVTTKKKIL 731


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 180/342 (52%), Gaps = 1/342 (0%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           F+V +  +      A  LL + R          YN L+N + K+   DEA+         
Sbjct: 87  FYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 146

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             QP+  T NI+++ +   G    A +   DM   GCSP +VT+N LI+ LCR   + R 
Sbjct: 147 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 206

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            ++L+++      +P+ ++Y  ++ G+CK  KMD+A    + M S G  P  VT+N L+ 
Sbjct: 207 IDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 265

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
              K G +  A  +  ++ S G  P ++T++++IDG  + G+  + +KL DEM+ K L P
Sbjct: 266 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 325

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           ++ T++ L++ L +E ++++A +F   L+   + P    YN ++ G CK+   D A   +
Sbjct: 326 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 385

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           A M  KRCKP + T+TILI G   +G   EA+ + N++   G
Sbjct: 386 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 158/302 (52%), Gaps = 1/302 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           F+  +Q   +   V +A +   +M + G  PD+VTYN LI+G+C+   +    + L  + 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 P+V+T+  ++   C  G+   A  + ++M   G  PS VTFN+LI+   + G +
Sbjct: 145 -SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + E+M   G  P+ ++++ L+ G+C+  ++++ ++  D M  +   P++ T+  L
Sbjct: 204 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 263

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           + ALCK+ +++ A   L QL      P    YN VIDG  K G  + A  ++ EM  K  
Sbjct: 264 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 323

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           KPD +T++ L+ G   +G++ EAI  F+ +  +G  P+ IT NS++  L K    + A  
Sbjct: 324 KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID 383

Query: 564 IM 565
            +
Sbjct: 384 FL 385



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 157/314 (50%), Gaps = 1/314 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C+ G  D      + M S G  PN       + S    G+   A+ LLS  
Sbjct: 119 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 178

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + S   +N L+N L +Q     A+ + ++       P++ ++N L+ G  +  ++
Sbjct: 179 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 238

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E+   M S GC PDIVTYNTL++ LC+  +V    E+L ++  K   SP ++TY +
Sbjct: 239 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG-CSPVLITYNT 297

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+GK ++A  + +EM   G+KP  +T++ L+ G  + G +  A      +   G
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +T++S++ G C++ Q ++ +     M  K   P   T+TILI  +  E    +A 
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 417

Query: 458 RFLKQLKWNDLVPK 471
             L +L    LV K
Sbjct: 418 DLLNELCSRGLVKK 431



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 102/200 (51%)

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           F+  +    K   +  A  + + M + G  PDVVT++ LI+G C+ G+L++ +K  + M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
                PNV T  I++ ++C   R  DA + L  +      P    +N +I+  C+ G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A  I+ +M    C P+ +++  L+ G C + +M  AI   + M+  GC PD +T N+L+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 550 SCLLKGGMPNEAFRIMQRAS 569
           + L K G  + A  I+ + S
Sbjct: 265 TALCKDGKVDVAVEILNQLS 284


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 170/348 (48%), Gaps = 1/348 (0%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G+ P++      ++     G+   A  L+ +        +    N+L+N L       +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           V +         QP+  T+  +++ + + G+   A E    M       D V Y+ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           LC+   +     L  E++ K  F  D++ YT++I G+C  G+ D    +  +M    I P
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             V F+ LID F K G +  AE + + M+  G  PD VT++SLIDG+C+  QL++   + 
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K   PN+ TF ILIN  CK N ++D     +++    +V     YN +I GFC+ 
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           G ++ A  +  EM  +R +PD V++ IL+ G C  G   +A+ IF K+
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 212/441 (48%), Gaps = 12/441 (2%)

Query: 137 KLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL L F    ++  L       T++ ++  LC  G       + D M   GH P    + 
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181

Query: 196 FFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             V+     GK   A  L+ +     F+P EVT     Y  +L  + K      A+ + +
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT-----YGPVLKVMCKSGQTALAMELLR 236

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           +      + D   ++I+I GL + G +  AF  F +M   G   DI+ Y TLI G C   
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
               G +LL+++  K + +PDVV ++++I  + K GK+ +A  ++ EM   GI P  VT+
Sbjct: 297 RWDDGAKLLRDM-IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
             LIDGF K   +  A +M + M+S G  P++ TF+ LI+GYC+   ++ GL+L  +M  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + +  +  T+  LI   C+  +L  A+   +++    + P    Y  ++DG C  G  ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  I  ++E+ + + D   + I+I G C   ++ +A  +F  +   G  PD  T N +I 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535

Query: 551 CLLKGGMPNEAFRIMQRASED 571
            L K G  +EA  + ++  ED
Sbjct: 536 GLCKKGSLSEADLLFRKMEED 556



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 201/419 (47%), Gaps = 1/419 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V +    +  T N ++  LC  G      ++ D M   G  PN       +    ++G+ 
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  LL +    ++ +    Y+ +++ L K  + D A  +F E      + D   +  L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+G    G      +   DM     +PD+V ++ LI    +  ++    EL KE+  +  
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM-IQRG 347

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SPD VTYTS+I G+CK  ++DKA  + + M S G  P+  TFN+LI+G+ K   +    
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +M   G + D VT+++LI G+C  G+L    +L  EM  + + P++ ++ IL++ L
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C       A    ++++ + +     +YN +I G C A  VD+A  +   +  K  KPD 
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            T+ I+I G C KG + EA  +F KM   G +P+  T N LI   L  G   ++ ++++
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 203/437 (46%), Gaps = 25/437 (5%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           + ++FSR+  S+    K Y+LV+  LC+             M   G   N   +   ++ 
Sbjct: 71  RLIDFSRL-FSVVARTKQYDLVL-DLCKQ------------MELKGIAHNLYTLSIMINC 116

Query: 201 CIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           C R  K   A   + +     + P  VT ST     L+N L  +    EA+ +      +
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFST-----LINGLCLEGRVSEALELVDRMVEM 171

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +P   T N L+ GL   G+V  A      M   G  P+ VTY  ++  +C+  + A  
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            ELL++++ + +   D V Y+ +I G CK G +D A  ++NEM   G K   + +  LI 
Sbjct: 232 MELLRKME-ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           GF   G       +   M+     PDVV FS+LID + + G+L +  +L  EM  + +SP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +  T+T LI+  CKEN+L+ A   L  +      P    +N +I+G+CKA  +D+   + 
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            +M  +    D VT+  LI G C  G++  A  +F +M+     PD ++   L+  L   
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 556 GMPNEAFRIMQRASEDQ 572
           G P +A  I ++  + +
Sbjct: 471 GEPEKALEIFEKIEKSK 487



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 195/398 (48%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V++ +C+ G       +   M       ++      +    + G  D A  L ++ 
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     +Y +L+         D+   + ++  +    PD   F+ LI    + G++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E   +M   G SPD VTY +LI G C+ N++ + + +L ++       P++ T+  
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNI 392

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK   +D    ++ +M+  G+    VT+N LI GF ++G +  A+ + + M+S  
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V++  L+DG C NG+  + L++ ++++   +  ++  + I+I+ +C  ++++DA 
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L    + P    YN +I G CK G++ EA+++  +MEE    P+  T+ ILI  H
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             +G   ++  +  ++ R G + D  TV  ++  L  G
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 176/391 (45%), Gaps = 69/391 (17%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQP----------------------------- 259
           Y   L + +     D+AV +F+E  R   +P                             
Sbjct: 40  YRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME 99

Query: 260 ------DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVN 310
                 + +T +I+I    R  ++  AF     +   G  PD VT++TLI+GLC   RV+
Sbjct: 100 LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVS 159

Query: 311 E--------VARGHE-----------------------LLKEVKFKSEFSPDVVTYTSVI 339
           E        V  GH+                       LL +   ++ F P+ VTY  V+
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
              CK G+   A  +  +M    IK  AV ++++IDG  K G++ +A  +   M   G+ 
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            D++ +++LI G+C  G+ + G KL  +M  + ++P+V  F+ LI+   KE +L +A   
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            K++    + P    Y  +IDGFCK   +D+AN ++  M  K C P+  TF ILI G+C 
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              + + + +F KM   G   D +T N+LI 
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 35/171 (20%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P ++ FS L     R  Q +  L LC +M+ K ++ N+YT +I+IN  C+  +L+ A   
Sbjct: 70  PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLA--- 126

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
                                 F   G + +             +PD VTF+ LI G C+
Sbjct: 127 ----------------------FSAMGKIIKLGY----------EPDTVTFSTLINGLCL 154

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +GR+ EA+ + ++M+ +G  P  IT+N+L++ L   G  ++A  ++ R  E
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 178/359 (49%), Gaps = 20/359 (5%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P  VT     +N+LL+ L  ++   EA+ +F +      +P+  TF  L+ GL R G 
Sbjct: 46  FHPTLVT-----FNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGR 96

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A      M   G  P+ +TY T++ G+C++ +      LL++++  S   PDVV Y+
Sbjct: 97  VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYS 156

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G  K G+   A  ++ EM   GI P  VT++ +I+GF   G    A+ + + ML  
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PDVVTFS LI+   + G LN    L  EM    + PNV T   L++ LC   +L DA
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276

Query: 457 RRFLKQLK-----------WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
               K ++           +N + P    YN +I G    G   EA  +  EM  +   P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           D VT++ +I G C + R+ EA  +F+ M     +P+ +T N+LI+   K GM ++   +
Sbjct: 337 DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 219/453 (48%), Gaps = 20/453 (4%)

Query: 137 KLGLKFLEFSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL      F ++  L  + +  T+N ++  LC   + D V    D        PN     
Sbjct: 30  KLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC---VEDRVSEALDLFHQMCK-PNVVTFT 85

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             ++   R G+   A  LL +     +  +   Y ++++ + K  +   A+ + ++   L
Sbjct: 86  TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145

Query: 256 -YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
            + +PD   ++ +I GL + G    A   F +M   G  PDIVTY+ +I+G C   + + 
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSE 205

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              LL+E+  + + SPDVVT++ +I+   K G ++ A  +  EM S G+ P+ VT N L+
Sbjct: 206 AQRLLQEMLVR-KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264

Query: 375 DGFGKVGNMVSA----EYMRERMLSF-------GYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           DG    G +  A    + M++ M+         G  PDV T++ LI G    G+  +  +
Sbjct: 265 DGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEE 324

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L +EM  + + P+  T++ +IN LCK++RL++A +    +      P    +N +I G+C
Sbjct: 325 LYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYC 384

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           KAG VD+   +  EM  +    + +T+  LI G    G +  ++ IF +M+  G  PD I
Sbjct: 385 KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTI 444

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ--RASEDQNL 574
           T+ ++++ L       +A  +++  + S D +L
Sbjct: 445 TIRNMLTGLWSKEELKKALAMLEELQMSMDHHL 477



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 178/352 (50%), Gaps = 52/352 (14%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D ++FNILI+      ++  A   F  +   G  P +VT+NTL+ GLC  + V+   +L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDL- 72

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
               F     P+VVT+T++++G C+ G++ +A  + + M   G++P+ +T+  ++DG  K
Sbjct: 73  ----FHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 128

Query: 380 VGNMVSAEYMRERMLSF------------------------------------GYLPDVV 403
           +G+ VSA  +  +M                                       G  PD+V
Sbjct: 129 MGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV 188

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+S +I+G+C +G+ ++  +L  EM  + +SP+V TF+ LINAL KE  LN A+  L+++
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-----------CKPDKVTFTI 512
             + + P     N ++DG C +G + +A  +   M++              +PD  T+ I
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNI 308

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           LI G   +G+ +EA  ++ +M   G  PD +T +S+I+ L K    +EA ++
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 5/247 (2%)

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +K   +   D+ ++  +I  +C   K+  A   + ++   G  P+ VTFN L+ G     
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  +  +M      P+VVTF++L++G CR G++ + + L D M    L PN  T+ 
Sbjct: 65  RVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 442 ILINALCKENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            +++ +CK      A   L+++ + + + P   +Y+ +IDG  K G   +A  +  EM++
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K   PD VT++ +I G C  G+  EA  +  +ML    +PD +T + LI+ L+K G  N 
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 561 AFRIMQR 567
           A  ++Q 
Sbjct: 241 AQDLLQE 247



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 4/141 (2%)

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
           G  +  ++Y+F ILI   C  ++L  A     +L      P    +N ++ G C    V 
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           EA  +  +M    CKP+ VTFT L+ G C +GR+VEA+++ ++M+  G  P+ IT  +++
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 550 SCLLKGGMPNEAFRIMQRASE 570
             + K G    A  ++++  E
Sbjct: 124 DGMCKMGDTVSALNLLRKMEE 144


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 197/407 (48%), Gaps = 3/407 (0%)

Query: 166 LCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
           L EM L  +   VFD + S  ++  P   + +   S  I  G  + A    S+ +   V 
Sbjct: 33  LKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVF 92

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
             T   N LL+   K    D+    FK+     ++P  +T+NI+I  + + G+V+ A   
Sbjct: 93  PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 152

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
           F +M   G  PD VTYN++I G  +V  +       +E+K      PDV+TY ++I+ +C
Sbjct: 153 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC-CEPDVITYNALINCFC 211

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K GK+      Y EM   G+KP+ V+++ L+D F K G M  A      M   G +P+  
Sbjct: 212 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 271

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T++SLID  C+ G L+   +L +EM    +  NV T+T LI+ LC   R+ +A     ++
Sbjct: 272 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 331

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               ++P    YN +I GF KA N+D A  ++ E++ +  KPD + +   I G C   ++
Sbjct: 332 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 391

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             A  + N+M   G   + +   +L+    K G P E   ++    E
Sbjct: 392 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 438



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 200/420 (47%), Gaps = 1/420 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F  ++ +   L ++G+ +     F  M+     P +      +    + GK D  K    
Sbjct: 60  FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 119

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                    + F YN +++ + K+ + + A  +F+E       PDT T+N +I G  ++G
Sbjct: 120 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 179

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +     FF +M    C PD++TYN LI+  C+  ++  G E  +E+K  +   P+VV+Y
Sbjct: 180 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK-GNGLKPNVVSY 238

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           ++++  +CK G M +A   Y +M   G+ P+  T+  LID   K+GN+  A  +   ML 
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   +VVT+++LIDG C   ++ +  +L  +M    + PN+ ++  LI+   K   ++ 
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L +LK   + P   +Y   I G C    ++ A V++ EM+E   K + + +T L+ 
Sbjct: 359 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 418

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +   G   E + + ++M  +      +T   LI  L K  + ++A     R S D  LQ
Sbjct: 419 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 478



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 203/430 (47%), Gaps = 12/430 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G        +  M+ +G  PN       V +  + G    A       
Sbjct: 202 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 261

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + + Y SL++A  K  N  +A  +  E  ++  + +  T+  LI GL     +
Sbjct: 262 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 321

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E F  M + G  P++ +YN LI G  +   + R  ELL E+K +    PD++ Y +
Sbjct: 322 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGT 380

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I G C L K++ A  + NEM  CGIK +++ +  L+D + K GN     ++ + M    
Sbjct: 381 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 440

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCKENRLNDA 456
               VVTF  LIDG C+N  +++ +   + +     L  N   FT +I+ LCK+N++  A
Sbjct: 441 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 500

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +Q+    LVP    Y  ++DG  K GNV EA  +  +M E   K D + +T L+ G
Sbjct: 501 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 560

Query: 517 --HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM------QRA 568
             HC   ++ +A S   +M+  G  PD++   S++    + G  +EA  +       Q  
Sbjct: 561 LSHC--NQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 618

Query: 569 SEDQNLQLPS 578
           + D +  LP+
Sbjct: 619 TSDNDNALPN 628



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 170/336 (50%), Gaps = 2/336 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           NS+L  +V  + AD  V+      R    P    F+ L   L  +G +++A + F  M  
Sbjct: 30  NSVLKEMV-LSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKR 88

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
           F   P   + N L+    ++ +        K++   +   P V TY  +I   CK G ++
Sbjct: 89  FRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM-IGAGARPTVFTYNIMIDCMCKEGDVE 147

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A G++ EM   G+ P  VT+N +IDGFGKVG +       E M      PDV+T+++LI
Sbjct: 148 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 207

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           + +C+ G+L  GL+   EMKG  L PNV +++ L++A CKE  +  A +F   ++   LV
Sbjct: 208 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 267

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P  + Y  +ID  CK GN+ +A  +  EM +   + + VT+T LI G C   RM EA  +
Sbjct: 268 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 327

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           F KM   G  P+  + N+LI   +K    + A  ++
Sbjct: 328 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 363


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 197/409 (48%), Gaps = 4/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ ++C     +    V D MR+ G  PN       ++   R G+ D A+ LL++ 
Sbjct: 180 TYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRL 239

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T  Y +LL  L      D+   +F E       P+  TF++LI+   R G V
Sbjct: 240 PSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMV 299

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M   GC+ +    N +I+ +C+   V    +LL ++      +PD ++YT+
Sbjct: 300 ERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG-CNPDTISYTT 358

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G C+  + D A  + NEM      P+ VTFN  I    + G +  A  + E+M   G
Sbjct: 359 VLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG 418

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               VVT+++L++G+C  G ++  L+L   M  K   PN  T+T L+  LC   RL+ A 
Sbjct: 419 CTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAA 475

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++   D  P    +N ++  FC+ G ++EA  +V +M E  C P+ +T+  L+ G 
Sbjct: 476 ELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGI 535

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
                  +A+ + + ++  G +PD IT +S+I  L K     EA ++  
Sbjct: 536 TKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFH 584



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 192/387 (49%), Gaps = 4/387 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++R  C  G+ +    V + M   G   N+ +    ++S  + G+ D A  LL+  
Sbjct: 285 TFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM 344

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T  Y ++L  L +    D+A  +  E  R    P+  TFN  I  L + G +
Sbjct: 345 GSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLI 404

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   GC+  +VTYN L++G C    +    EL + +  K    P+ +TYT+
Sbjct: 405 EQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK----PNTITYTT 460

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C   ++D A  +  EM      P+ VTFNVL+  F + G +  A  + E+M+  G
Sbjct: 461 LLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG 520

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++T+++L+DG  ++      L+L   +  K +SP+V TF+ +I  L KE+R+ +A 
Sbjct: 521 CTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAV 580

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    ++   + PK  +YN ++ G CK   +D A    A M    C P++ T+ ILI G 
Sbjct: 581 QLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGL 640

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDIT 544
             +G + EA  + + +   G    ++T
Sbjct: 641 AHEGLLKEAQDLLSVLCSRGVLNKNLT 667



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 4/396 (1%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           L  +V++V      DG  P+  +    + +  R G+   A  +L         +  F YN
Sbjct: 56  LAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYN 115

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           +L+    +  + D A  +      +   PD +T+  LI+ L   G V  A     DM   
Sbjct: 116 TLVAGYCRYGHLDAARRLIGS---MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR 172

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           GC P++VTY  L+  +CR +   +   +L E++ K   +P++VTY  +I+G C+ G++D 
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDD 231

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  + N + S G +P  V++  L+ G          E +   M+    +P+ VTF  LI 
Sbjct: 232 ARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR 291

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
            +CR G + + +++ ++M     + N     I+IN++CK+ R++DA + L  +      P
Sbjct: 292 FFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNP 351

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  V+ G C+A   D+A  ++ EM    C P++VTF   I   C KG + +AI + 
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 411

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +M   GC    +T N+L++     G  + A  + +
Sbjct: 412 EQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFR 447



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 201/441 (45%), Gaps = 36/441 (8%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++R+LC  G       V       G   +       V+   R G  DAA+ L+       
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---P 138

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V    + Y  L+  L  +    +A+ +  +  R   QP+  T+ +L++ + R    ++A 
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M + GC+P+IVTYN +I+G+CR   V    ELL  +     F PD V+YT+++ G
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG-FQPDTVSYTTLLKG 257

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C   + D    ++ EM      P+ VTF++LI  F + G +  A  + E+M   G   +
Sbjct: 258 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATN 317

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
               + +I+  C+ G+++   KL ++M     +P+  ++T ++  LC+  R +DA+  L 
Sbjct: 318 TTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLN 377

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK-------------------- 501
           ++  N+  P    +N  I   C+ G +++A +++ +M E                     
Sbjct: 378 EMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQG 437

Query: 502 ------------RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
                        CKP+ +T+T L+ G C   R+  A  +  +MLR  C P+ +T N L+
Sbjct: 438 HIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLV 497

Query: 550 SCLLKGGMPNEAFRIMQRASE 570
           S   + G   EA  ++++  E
Sbjct: 498 SFFCQKGFLEEAIELVEQMME 518



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 185/368 (50%), Gaps = 16/368 (4%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           R+G CD           GE     ++   L+  L ++    +A  + +      S  D +
Sbjct: 65  RSGSCD-----------GEAP-DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVF 112

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            +N L+ G  R G +  A      +GS   +PD  TY  LI  LC    VA    LL ++
Sbjct: 113 AYNTLVAGYCRYGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 169

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +    P+VVTYT ++   C+    ++A  + +EM + G  P+ VT+NV+I+G  + G 
Sbjct: 170 -LRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 228

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  +  R+ S+G+ PD V++++L+ G C + + +   +L  EM  KN  PN  TF +
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI   C+   +  A + L+Q+  +       + N VI+  CK G VD+A  ++ +M    
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C PD +++T ++ G C   R  +A  + N+M+R  C P+++T N+ I  L + G+  +A 
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 408

Query: 563 RIMQRASE 570
            ++++ SE
Sbjct: 409 MLIEQMSE 416


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 223/456 (48%), Gaps = 20/456 (4%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           N  + +K L  S+  LSL  S  TYN +++  C+ G  D  + +   M S G   N    
Sbjct: 374 NKAIEIKDLMVSK-GLSLTSS--TYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSF 430

Query: 195 EFFVSSCIRAGKCDAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
              +         D+A     + LL    PG   ++T     L++ L K     +AV ++
Sbjct: 431 TSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTT-----LISGLCKHGKHSKAVELW 485

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            ++       DT T N L+ GL   G++++ F    ++   G   D V+YNTLISG C  
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++      + E+  K    PD  TY+ +I G   + K+++A   + +    G+ P   T
Sbjct: 546 KKLDEAFMFMDEM-VKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYT 604

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           ++V+IDG  K       + + + M+S    P+ V ++ LI  YCR+G+L+  L+L ++MK
Sbjct: 605 YSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMK 664

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            K +SPN  T+T LI  +   +R+ +A+  L++++   L P  F Y  +IDG+ K G + 
Sbjct: 665 HKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMV 724

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +   ++ EM  K   P+K+T+T++I G+   G + EA  + ++M   G  PD IT    I
Sbjct: 725 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFI 784

Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQ--LPSWKKAV 583
              LK G   +AF    + S+++N    +  W K +
Sbjct: 785 YGYLKQGGVLQAF----KGSDEENYAAIIEGWNKLI 816



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 190/395 (48%), Gaps = 20/395 (5%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMYNSLL 233
           VF  + + G  P+       ++S +RA +    C+A   +     P       +++ + +
Sbjct: 205 VFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSP-----DVYLFTTAI 259

Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           NA  K    +EA+ +F +       P+  T+N +I GL   G   +AF F   M   G  
Sbjct: 260 NAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVE 319

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P ++TY+ L+ GL +   +   + +LKE+  K  F P+V+ Y ++I    + G ++KA  
Sbjct: 320 PTLITYSILVKGLTKAKRIGDAYCVLKEMTEKG-FPPNVIVYNNLIDSLIEAGSLNKAIE 378

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           I + M S G+  ++ T+N LI G+ K G    AE + + MLS G+  +  +F+S+I   C
Sbjct: 379 IKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLC 438

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
            +   +  L+   EM  +N+SP     T LI+ LCK  + + A        W   + K F
Sbjct: 439 SHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVEL-----WLKFLNKGF 493

Query: 474 MY-----NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +      N ++ G C+AG ++E   I  E+  +    D+V++  LI G C   ++ EA  
Sbjct: 494 LVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFM 553

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             ++M++ G  PD+ T + LI  LL      EA +
Sbjct: 554 FMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQ 588



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 184/425 (43%), Gaps = 34/425 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +   + + C+ G  +    +F  M   G +PN       +     +G+ D A     +  
Sbjct: 255 FTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMV 314

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  +   Y+ L+  L K     +A  + KE       P+   +N LI  L   G + 
Sbjct: 315 ERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLN 374

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE----------------- 321
           KA E    M S G S    TYNTLI G C+  +      LLKE                 
Sbjct: 375 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVI 434

Query: 322 ------------VKFKSE-----FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
                       ++F  E      SP     T++ISG CK GK  KA  ++ +  + G  
Sbjct: 435 CLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFL 494

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
               T N L+ G  + G +     +++ +L  G++ D V++++LI G C N +L++    
Sbjct: 495 VDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMF 554

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEM  K L P+ YT++ILI  L   N++ +A +F    K N ++P  + Y+ +IDG CK
Sbjct: 555 MDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCK 614

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           A   +E   +  EM     +P+ V +  LI  +C  GR+  A+ +   M   G +P+  T
Sbjct: 615 AERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSAT 674

Query: 545 VNSLI 549
             SLI
Sbjct: 675 YTSLI 679



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 2/336 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N LL +LV+     +    F    +  S PD + F   I    + G+V++A E F  M  
Sbjct: 222 NILLTSLVRATEFQKCCEAFHVVCKGVS-PDVYLFTTAINAFCKGGKVEEAIELFSKMEE 280

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  P++VTYNT+I GL           + KE   +    P ++TY+ ++ G  K  ++ 
Sbjct: 281 AGVVPNVVTYNTVIDGLGMSGRYDEAF-MFKEKMVERGVEPTLITYSILVKGLTKAKRIG 339

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  +  EM   G  P+ + +N LID   + G++  A  +++ M+S G      T+++LI
Sbjct: 340 DAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 399

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            GYC++GQ +   +L  EM     + N  +FT +I  LC  +  + A RF+ ++   ++ 
Sbjct: 400 KGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMS 459

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P   +   +I G CK G   +A  +  +   K    D  T   L+ G C  G++ E   I
Sbjct: 460 PGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRI 519

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             ++L  G   D ++ N+LIS        +EAF  M
Sbjct: 520 QKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFM 555



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 116/237 (48%), Gaps = 14/237 (5%)

Query: 338 VISGYCKLGKMDK---ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +I  YC   K D    A  ++  + + G+ PS  T N+L+       ++V A   ++   
Sbjct: 186 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLT------SLVRATEFQKCCE 239

Query: 395 SF-----GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           +F     G  PDV  F++ I+ +C+ G++ + ++L  +M+   + PNV T+  +I+ L  
Sbjct: 240 AFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGM 299

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R ++A  F +++    + P    Y+ ++ G  KA  + +A  ++ EM EK   P+ + 
Sbjct: 300 SGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIV 359

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +  LI      G + +AI I + M+  G +    T N+LI    K G  + A R+++
Sbjct: 360 YNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLK 416



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 1/143 (0%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           +  K + P+  T  IL+ +L +             +    + P  +++   I+ FCK G 
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGK 267

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           V+EA  + ++MEE    P+ VT+  +I G  M GR  EA     KM+  G  P  IT + 
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327

Query: 548 LISCLLKGGMPNEAFRIMQRASE 570
           L+  L K     +A+ +++  +E
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTE 350


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 209/403 (51%), Gaps = 13/403 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K  ++++ +L  +G  +    VF+  +  G   N       VS+  R+G+C  A  +   
Sbjct: 200 KLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQA 259

Query: 217 FRPGEVTMSTFMYNSLLNALVKQN-NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            +      +   YN++++A  K   +  +A+ +F+E  +   +PD  TFN LI   SR  
Sbjct: 260 MKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGS 319

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             + +   F +M   G   DI TYNTLI  +C+  ++     ++  ++ K+  SP+VVTY
Sbjct: 320 LWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKN-ISPNVVTY 378

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +++I GY KLG  ++A G+Y++M   G++P  V++N LID + K+G    A    + M  
Sbjct: 379 STMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMER 438

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   DVVT+++LID Y + G+      L D+MK + L PNV T++ LI+A  K     D
Sbjct: 439 VGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQD 498

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     + K   L P   +Y+ +ID  CK G V++A V++ EM +   +P+ VT+  LI 
Sbjct: 499 ATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLID 558

Query: 516 GHCMKGRM--VEA------ISIFNKMLRIGCAPDDITVNSLIS 550
            +   G++  VEA      I++FNK   +G    +I   +L S
Sbjct: 559 AYGRNGQVDNVEAAKGNMPINVFNK---VGDRSTEIICKTLTS 598



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 211/424 (49%), Gaps = 16/424 (3%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPN--SPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           ++R L   G  +     +++M   GHL +  S +    +S+  R GK + A  + ++ + 
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 227

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG-EVK 278
                + + Y+++++A  +     EA+ +F+   +   +P+  T+N +I    + G ++K
Sbjct: 228 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLK 287

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA + F +M   G  PD +T+N+LI+   R +       +  E++ +     D+ TY ++
Sbjct: 288 KALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRG-IEQDIFTYNTL 346

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I   CK G+M+ A  I + M    I P+ VT++ +IDG+GK+G    A  +   M   G 
Sbjct: 347 IDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGV 406

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD V++++LID Y + G+ +  L  C +M+   L  +V T+  LI+A  K+ +  DA  
Sbjct: 407 RPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAG 466

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++K   LVP    Y+ +ID + KAG   +A  I  E +    KPD V ++ LI   C
Sbjct: 467 LFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCC 526

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL-----------LKGGMPNEAF-RIMQ 566
             G + +A+ +  +M + G  P+ +T NSLI               KG MP   F ++  
Sbjct: 527 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGD 586

Query: 567 RASE 570
           R++E
Sbjct: 587 RSTE 590



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 10/318 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ ++C+ G  +    +   MR     PN       +    + G  + A GL    
Sbjct: 342 TYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDM 401

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V      YN+L++   K    D+A+   K+  R+  + D  T+N LI    + G+ 
Sbjct: 402 KESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKY 461

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A   F  M + G  P+++TY+ LI    +         +  E K ++   PDVV Y+S
Sbjct: 462 KDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFK-RAGLKPDVVLYSS 520

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--S 395
           +I   CK G ++ A  +  EM   GI+P+ VT+N LID +G+ G + + E  +  M    
Sbjct: 521 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINV 580

Query: 396 FGYLPD------VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           F  + D        T +S  +     G L   + +  EM+   L PNV TF+ ++NA  +
Sbjct: 581 FNKVGDRSTEIICKTLTSQQNANDHTGVL-AAVSVFHEMQQFGLKPNVVTFSAILNACSR 639

Query: 450 ENRLNDARRFLKQLKWND 467
            + L +A   L+Q+++ D
Sbjct: 640 CSSLQEASVLLEQMRFFD 657


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 212/454 (46%), Gaps = 35/454 (7%)

Query: 137  KLGLKFLEF--SRVNLSLNHSFKTYNL----------------VMRSLCEMGLHDSVQVV 178
            +L LKFL++   +  L L H    Y L                ++R LC+MG+    + +
Sbjct: 842  RLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGI--GSKSI 899

Query: 179  FDYMRSDGHLPNS--PMIEFFVSSCIRAGKCDAAK------GLLSQFRPGEVTMSTFMYN 230
            F  +     L NS   + +  +   ++ G  D A       GL+  F+P     S +  N
Sbjct: 900  FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVG-FKP-----SVYTCN 953

Query: 231  SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
             +L ++VK    +    +F+E       P+  TFNILI GL   G +KKA      M   
Sbjct: 954  MILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEEN 1013

Query: 291  GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
            G  P IVTYNTL++  C+        EL+  +  K     DV TY   I   C   +  K
Sbjct: 1014 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG-IEADVCTYNVFIDNLCTNHRSAK 1072

Query: 351  ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
            A  +  +M    I P+ VT+N LI+GF K G +  A  +   M  F   P+ VT+++LI 
Sbjct: 1073 AYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIG 1132

Query: 411  GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
            G+C  G   + L+L D M+   L  N  T+  L+N LCK  +   A+R L++++ ND+V 
Sbjct: 1133 GHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVV 1192

Query: 471  KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
                Y  +IDG CK G +DEA  +V  M +    PD +T++ LI G C  G +  A  I 
Sbjct: 1193 GHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252

Query: 531  NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             +M R G   + I  ++LI    + G   EA ++
Sbjct: 1253 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 208/420 (49%), Gaps = 3/420 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYN ++   C+ G + +   + DYM   G   +      F+ +     +   A  LL + 
Sbjct: 1021 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 1080

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            R   ++ +   YN+L+N  VK+     A  +F E  +    P+  T+N LI G   +G+ 
Sbjct: 1081 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 1140

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++A      M + G   + VTY TL++GLC+  +      LL+ ++  ++     + YT 
Sbjct: 1141 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRV-NDMVVGHIAYTV 1199

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I G CK G +D+A  +   M   G+ P  +T++ LI+GF +VGN+ SA+ +  RM   G
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             + + + +S+LI  +C++G + + +K+   M       + +T  +L+++LC++ +L +A 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            +FL  +    LVP    Y+ +I+G+   G+   A     +M +    P   T+  L+ G 
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379

Query: 518  CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
            C  G +VEA    N++  I  A D +  N+L++   K G  +EA  +  +    QN  LP
Sbjct: 1380 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV--QNNVLP 1437



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 200/412 (48%), Gaps = 1/412 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
             ++L++R   + G+ D     F+ +   G  P+       ++S ++  + +    L  + 
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +  +   +N L+N L  + N  +A  + K+       P   T+N L+    + G  
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            K A E    M   G   D+ TYN  I  LC  +  A+ + LLK+++ K   SP+ VTY +
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR-KEMISPNEVTYNT 1094

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I+G+ K GK+  A  ++NEM+   + P+ VT+N LI G   VG+   A  + + M + G
Sbjct: 1095 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 1154

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               + VT+ +L++G C++ +     +L + M+  ++      +T+LI+ LCK   L++A 
Sbjct: 1155 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 1214

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            + +  +  + + P    Y+ +I+GFC+ GN+  A  I+  M       +K+ ++ LI   
Sbjct: 1215 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 1274

Query: 518  CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            C  G + EA+ ++  M   G   D  T N L+S L + G   EA + +   S
Sbjct: 1275 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 1326



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 192/408 (47%), Gaps = 1/408 (0%)

Query: 155  SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            S  T N+++ S+ +    + V  +F  M   G  PN       ++     G    A  LL
Sbjct: 948  SVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLL 1007

Query: 215  SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
             Q        +   YN+LLN   K+     A+ +         + D  T+N+ I  L   
Sbjct: 1008 KQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTN 1067

Query: 275  GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
                KA+     M     SP+ VTYNTLI+G  +  ++    ++  E+  K + SP+ VT
Sbjct: 1068 HRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMS-KFDLSPNCVT 1126

Query: 335  YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            Y ++I G+C +G  ++A  + + M + G++ + VT+  L++G  K      A+ + ERM 
Sbjct: 1127 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186

Query: 395  SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                +   + ++ LIDG C+NG L++ ++L   M    ++P+V T++ LIN  C+   + 
Sbjct: 1187 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 1246

Query: 455  DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
             A+  + ++  + LV    +Y+ +I  FC+ GNV EA  + A M       D  T  +L+
Sbjct: 1247 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 1306

Query: 515  IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
               C  G++ EA      M RIG  P+ IT + +I+     G P  AF
Sbjct: 1307 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAF 1354



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 193/458 (42%), Gaps = 42/458 (9%)

Query: 159  YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL-SQ 216
            YN ++   C+ G LH++V  +FD M  +  LP+S      ++   R GK   A  L  + 
Sbjct: 1407 YNTLLAETCKSGNLHEAV-ALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA 1465

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               G +  +  MY  L++ L K  +   A Y F+E  +  + PDT  FN +I   SR G+
Sbjct: 1466 MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 1525

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + KA +FF  M  +G  P++ TYN L+ G  +   + R   L   +  +  F PD +T+ 
Sbjct: 1526 MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF-PDKLTFH 1584

Query: 337  SVISG-----------------------------------YCKLGKMDKATGIYNEMNSC 361
            S+I G                                   Y + GKM KA  + N MN+ 
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 1644

Query: 362  GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            G+ P   T+N + +G  K      +  +   ML  G +P    + +LI+G CR G +   
Sbjct: 1645 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 1704

Query: 422  LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             KL DEM+      +    + ++  L    +  DA   L  +    L+P    +  ++  
Sbjct: 1705 FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHR 1764

Query: 482  FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            FC+   + EA  +   ME    K D V + +LI+G C  G    A  ++ +M      P+
Sbjct: 1765 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1824

Query: 542  DITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
              T   L+  +      N   +  +  ++ Q   L SW
Sbjct: 1825 ITTYAVLVDAI---SAANNLIQGEKLLTDLQERGLISW 1859



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 195/436 (44%), Gaps = 19/436 (4%)

Query: 141  KFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
            KFL   SR+ L  N    TY+ ++     +G   +    FD M   G  P+     FF  
Sbjct: 1320 KFLCHMSRIGLVPNSI--TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS-----FFTY 1372

Query: 200  SCIRAGKCDA-----AKGLLSQFR--PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
              +  G C       AK  L++    PG V   + MYN+LL    K  N  EAV +F + 
Sbjct: 1373 GSLLKGLCKGGNLVEAKKFLNRLHYIPGAV--DSVMYNTLLAETCKSGNLHEAVALFDKM 1430

Query: 253  FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF-YDMGSFGCSPDIVTYNTLISGLCRVNE 311
             +    PD++T++ L+ GL R G+   A   F   MG     P+ V Y  L+ GL +   
Sbjct: 1431 VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 1490

Query: 312  VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
                    +E+  K    PD V + ++I    + G+M KA   ++ M   G+ P+  T+N
Sbjct: 1491 PKAAFYFFEEM-MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 1549

Query: 372  VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            +L+ GF K   ++    +   M+  G  PD +TF SLI G  ++G  + G+KL  +M  +
Sbjct: 1550 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 1609

Query: 432  NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                + +TF ILIN   +  ++  A   +  +    + P    YN + +G  K     E+
Sbjct: 1610 GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 1669

Query: 492  NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             V++ EM E    P    +  LI G C  G +  A  + ++M  +G    ++  ++++  
Sbjct: 1670 TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 1729

Query: 552  LLKGGMPNEAFRIMQR 567
            LL  G   +A  ++  
Sbjct: 1730 LLHCGKTEDAMLVLDH 1745



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 186/414 (44%), Gaps = 2/414 (0%)

Query: 159  YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            Y+ ++ + C+ G       V+  M  +GH  +       VSS  R GK   A+  L    
Sbjct: 1267 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 1326

Query: 219  PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
               +  ++  Y+ ++N      +   A   F +  +    P  +T+  L++GL + G + 
Sbjct: 1327 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLV 1386

Query: 279  KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            +A +F   +     + D V YNTL++  C+   +     L  ++  ++   PD  TY+S+
Sbjct: 1387 EAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM-VQNNVLPDSYTYSSL 1445

Query: 339  ISGYCKLGKMDKATGIY-NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            ++G C+ GK   A  ++   M    + P+ V +  L+DG  K G+  +A Y  E M+  G
Sbjct: 1446 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 1505

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              PD V F+++ID   R GQ+ +       M+   + PN+ T+ IL++   K+  L    
Sbjct: 1506 TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYL 1565

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                 +    + P    ++ +I G  K+G  D    ++ +M  +    D+ TF ILI  +
Sbjct: 1566 SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 1625

Query: 518  CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
               G+M +A  + N M  +G  PD  T N + + L K     E+  ++    E+
Sbjct: 1626 SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 1679



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 189/411 (45%), Gaps = 2/411 (0%)

Query: 155  SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            SF TY  +++ LC+ G     +   + +       +S M    ++   ++G    A  L 
Sbjct: 1368 SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 1427

Query: 215  SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSR 273
             +     V   ++ Y+SLL  L ++  A  AV +F     R    P+   +  L+ GLS+
Sbjct: 1428 DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSK 1487

Query: 274  IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             G  K AF FF +M   G  PD V +N +I    R  ++ + ++    +++     P++ 
Sbjct: 1488 AGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG-VCPNLA 1546

Query: 334  TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            TY  ++ G+ K   + +   +Y+ M   GI P  +TF+ LI G  K G       +  +M
Sbjct: 1547 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 1606

Query: 394  LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            +  G L D  TF+ LI+ Y  +G++ +   L + M    + P+  T+  + N L K++  
Sbjct: 1607 IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF 1666

Query: 454  NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             ++   L ++  N ++PK   Y  +I+G C+ G++  A  +  EME       +V  + +
Sbjct: 1667 RESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 1726

Query: 514  IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            + G    G+  +A+ + + MLR+   P   T  +L+    +     EA ++
Sbjct: 1727 VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 169/371 (45%), Gaps = 18/371 (4%)

Query: 218  RPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY--------SQPDTW------ 262
            +PG E+   T MY    + LVK    D A  + +   ++         +  DT+      
Sbjct: 854  QPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSI 913

Query: 263  --TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
               F++LI+   + G +  A E F  +G  G  P + T N +++ + +         L +
Sbjct: 914  PSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFR 973

Query: 321  EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            E+  K    P+V T+  +I+G C  G + KA  +  +M   G  P+ VT+N L++ + K 
Sbjct: 974  EMSDKG-ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKK 1032

Query: 381  GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
            G   +A  + + M+  G   DV T++  ID  C N +  +   L  +M+ + +SPN  T+
Sbjct: 1033 GRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTY 1092

Query: 441  TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
              LIN   KE ++  A +   ++   DL P    YN +I G C  G+ +EA  ++  ME 
Sbjct: 1093 NTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 1152

Query: 501  KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
               + ++VT+  L+ G C   +   A  +  +M         I    LI  L K GM +E
Sbjct: 1153 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 1212

Query: 561  AFRIMQRASED 571
            A +++    +D
Sbjct: 1213 AVQLVGNMYKD 1223


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 187/381 (49%), Gaps = 6/381 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH---LPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +YN V+ +LC  G HD    +   M  + H    PN+      + +       D A GLL
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              R   V      Y +L+  L      D+AV +  E      +P+   ++ L+QG  + 
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  +   + F +M   G  PD+V Y  LI  LC+V +  + H ++ ++  +    P+VVT
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM-DMMVRRGLEPNVVT 257

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I+  CK G + +A G+  +M+  G+ P  VT+N LI G   V  M  A ++ E M+
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 395 SFGYL--PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
               +  P+VVTF+S+I G C  G++ Q  ++   M+      N+ T+ +LI  L + ++
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A   + ++    L P  F Y+ +I GFCK   VD A  +++ M ++  +P+   +  
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 513 LIIGHCMKGRMVEAISIFNKM 533
           L++  C +G M  A ++FN+M
Sbjct: 438 LLVAMCEQGMMERARNLFNEM 458



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 205/422 (48%), Gaps = 3/422 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++R LC+    D    +   M   G  PN  +    +    ++G+ +    +  + 
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM 211

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     MY  L+++L K   A +A  +     R   +P+  T+N+LI  + + G V
Sbjct: 212 SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSV 271

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYT 336
           K+A      M   G +PD+VTYNTLI GL  V E+     LL+E V+ K+   P+VVT+ 
Sbjct: 272 KEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFN 331

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           SVI G C +G+M +A  +   M   G   + VT+N+LI G  +V  +  A  + + M S 
Sbjct: 332 SVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL 391

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T+S LI G+C+  Q+++   L   M+ + + P ++ +  L+ A+C++  +  A
Sbjct: 392 GLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERA 451

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           R    ++  N+       Y+ +I G CKAG++  A  ++  + ++   PD VT++I+I  
Sbjct: 452 RNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
               G M  A  +  +M   G  PD    +SLI      G  N+   ++ R    +N+ L
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI-REMITKNIAL 569

Query: 577 PS 578
            S
Sbjct: 570 DS 571



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 169/368 (45%), Gaps = 39/368 (10%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  +  TYN+++  +C                                   + G  
Sbjct: 247 VRRGLEPNVVTYNVLINCMC-----------------------------------KEGSV 271

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFN 265
             A G+L +     V      YN+L+  L      DEA+++ +E  R  +  +P+  TFN
Sbjct: 272 KEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFN 331

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            +IQGL  IG +++AF+    M   GC  ++VTYN LI GL RV++V +  EL+ E+   
Sbjct: 332 SVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL 391

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PD  TY+ +I G+CK+ ++D+A  + + M   GI+P    +  L+    + G M  
Sbjct: 392 G-LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   M    +  DVV +S++I G C+ G L    +L   +  + L+P+  T++I+IN
Sbjct: 451 ARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              K   +  A   LKQ+  +  +P   +++ +I G+   G +++   ++ EM  K    
Sbjct: 510 MFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIAL 569

Query: 506 DKVTFTIL 513
           D    + L
Sbjct: 570 DSKIISTL 577



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 157/363 (43%), Gaps = 70/363 (19%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++ SLC++G       V D M   G  PN       ++   + G    A G+L +  
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMS 282

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQGLSRIG- 275
              V      YN+L+  L      DEA+++ +E  R  +  +P+  TFN +IQGL  IG 
Sbjct: 283 EKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGR 342

Query: 276 ----------------------------------EVKKAFEFFYDMGSFGCSPDIVTYNT 301
                                             +V+KA E   +M S G  PD  TY+ 
Sbjct: 343 MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402

Query: 302 LISGLCRVNEVARGHELLKEVK---------------------------------FKSEF 328
           LI G C++ +V R  +LL  ++                                   + F
Sbjct: 403 LIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNF 462

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             DVV Y+++I G CK G +  A  +   +   G+ P AVT++++I+ F K G+M +A  
Sbjct: 463 PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANG 522

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + ++M + G+LPDV  F SLI GY   G++N+ L+L  EM  KN++ +    + L  +L 
Sbjct: 523 VLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582

Query: 449 KEN 451
             N
Sbjct: 583 ASN 585



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 139/274 (50%), Gaps = 4/274 (1%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKAT 352
           D V+YNT+++ LCR     R   LL+ +  +   +  P+ V+YT ++   C     D+A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+   M S G++   VT+  LI G      +  A  +   M   G  P+VV +SSL+ GY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C++G+     K+  EM  K + P+V  +T LI++LCK  +   A   +  +    L P  
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +I+  CK G+V EA  ++ +M EK   PD VT+  LI G      M EA+ +  +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 533 MLRIG--CAPDDITVNSLISCLLKGGMPNEAFRI 564
           M+R      P+ +T NS+I  L   G   +AF++
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 182/397 (45%), Gaps = 5/397 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++R+LC        Q     M   G  P++      +    R  + D A+ L  + 
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKM 190

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +     Y +L+    +    DEA+ +F+E      QPD +T   L++GL      
Sbjct: 191 PLRGFSQDAVSYAALIEGFCETGRVDEALELFREL----EQPDMYTHAALVKGLCDARRG 246

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++       M   G  P    Y  L+   CR  +     ++L E+ F +   P  VT T+
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEM-FDNGLVPCAVTCTA 305

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V++ YC+ G+M  A  ++  M   G +P+  T+N ++ GF  VG +  A  + ++M   G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT++ LI G C +G +    +L   M+G  L+ + YT+ +LI+ALCK  ++++A 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L++  + P    +N VI+G CK G  D A   + +M    C PD  T++  I   
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           C      E +S  ++ML+    P  +    +I  L K
Sbjct: 486 CKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFK 522



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 182/387 (47%), Gaps = 1/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +++ LC+    +    +   M+  G  P +      V    R  K + A+ +L++ 
Sbjct: 232 THAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +        +++NA  ++     AV +F+       +P+ WT+N ++QG   +G+V
Sbjct: 292 FDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKV 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      M   G  PD+VTYN LI G C    +     LL+ ++  +  + D  TY  
Sbjct: 352 YKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLME-GNGLAADQYTYNV 410

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK GK+D+A  +++ +   GI+P++VTFN +I+G  K G    A    E+M+S G
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T+S  I+  C+     +GL   DEM  K++ P+   +TI+I+ L KE     A 
Sbjct: 471 CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLAT 530

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R   Q+      P    Y   +  +C  G + EA  +V EM++     D + +  LI GH
Sbjct: 531 RIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGH 590

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDIT 544
              G+   A++I   M  +   P+  T
Sbjct: 591 TSIGKTDHAVTILKHMTGVASMPNHFT 617



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 159/318 (50%), Gaps = 9/318 (2%)

Query: 248 MFKEYFRLYSQ----PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           M + +  +Y      P   T+N LI+ L R  +++ A  +   M   G  PD  T+N+LI
Sbjct: 112 MLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLI 171

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            G CR  ++    +L  ++  +  FS D V+Y ++I G+C+ G++D+A  ++ E+     
Sbjct: 172 LGYCRTQQLDVAQDLFDKMPLRG-FSQDAVSYAALIEGFCETGRVDEALELFRELE---- 226

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P   T   L+ G           YM ++M   G+ P    +++L+D +CR  +  +  K
Sbjct: 227 QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEK 286

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           + +EM    L P   T T ++NA C+E R++ A R  + +K     P  + YN ++ GFC
Sbjct: 287 MLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFC 346

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             G V +A  ++ +M E   +PD VT+ +LI G C+ G +  A  +   M   G A D  
Sbjct: 347 NVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQY 406

Query: 544 TVNSLISCLLKGGMPNEA 561
           T N LI  L K G  +EA
Sbjct: 407 TYNVLIDALCKTGKVDEA 424



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 165/328 (50%), Gaps = 5/328 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN+L+ AL ++ +   A        R   +PD +TFN LI G  R  ++  A + F  M 
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G S D V+Y  LI G C    V    EL +E++      PD+ T+ +++ G C   + 
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELE-----QPDMYTHAALVKGLCDARRG 246

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++   +  +M   G +P+   +  L+D + +      AE M   M   G +P  VT +++
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ++ YCR G+++  +++ + MK K   PNV+T+  ++   C   ++  A   L Q++   +
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I G C  G+++ A  ++  ME      D+ T+ +LI   C  G++ EA S
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +F+ +   G  P+ +T N++I+ L KGG
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKGG 454



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 179/425 (42%), Gaps = 17/425 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C +G       + D MR  G  P+       +      G  ++A  LL   
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM 396

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + YN L++AL K    DEA  +F        +P++ TFN +I GL + G+ 
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKF 456

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  F   M S GC+PD  TY+  I  LC+      G   + E+  + +  P  V YT 
Sbjct: 457 DVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEM-LQKDVKPSTVNYTI 515

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI    K      AT I+ +M S G  P  VT+   +  +   G +  AE +   M   G
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL-------------- 443
            + D + +++LIDG+   G+ +  + +   M G    PN +TF IL              
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVP 635

Query: 444 --INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
               ++ K   L D     + +K N +      Y  +++GF +   +DE   +V+ M+E 
Sbjct: 636 LKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKED 695

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               ++  +T L+   C      +A ++   M+  G  P+ I+   L+S     G  + A
Sbjct: 696 DLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRA 755

Query: 562 FRIMQ 566
             I +
Sbjct: 756 KEIFR 760



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 170/414 (41%), Gaps = 20/414 (4%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKL------------------GLKFLEFSRVNLSLNHSFKT 158
            CE      +LE+ + L+ P +                  GL  L+  +  L    + + 
Sbjct: 209 FCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMK-ELGWRPATRA 267

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++   C     +  + + + M  +G +P +      V++  R G+   A  +    +
Sbjct: 268 YAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMK 327

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 + + YN+++          +A+ +  +      +PD  T+N+LI+G    G ++
Sbjct: 328 LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIE 387

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            AF     M   G + D  TYN LI  LC+  +V     L   ++++    P+ VT+ +V
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG-IRPNSVTFNTV 446

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+G CK GK D A     +M S G  P   T++  I+   K           + ML    
Sbjct: 447 INGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV 506

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P  V ++ +ID   +        ++  +M     SP+V T+T  + A C E RL++A  
Sbjct: 507 KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN 566

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
            + ++K   ++     YN +IDG    G  D A  I+  M      P+  TF I
Sbjct: 567 VVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFI 620



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/413 (22%), Positives = 165/413 (39%), Gaps = 64/413 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ +LC+ G  D    +FD +   G  PNS      ++   + GK D A   L + 
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKM 466

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T+ Y+  +  L K   + E +    E  +   +P T  + I+I  L +    
Sbjct: 467 VSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNY 526

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   +  M S GCSPD+VTY T +   C    +     ++ E+K K     D + Y +
Sbjct: 527 GLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK-KGGIIVDAMAYNT 585

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKP-------------------------------- 365
           +I G+  +GK D A  I   M      P                                
Sbjct: 586 LIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTI 645

Query: 366 -------------------SAVTFNVLIDGFGK------VGNMVSAEYMRERMLSFGYLP 400
                              SA  +  +++GF +      V ++VS  +M+E  L      
Sbjct: 646 ELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVS--HMKEDDLPLN--E 701

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D+  ++SL++ +C+         L   M G    PN+ ++  L++    E + + A+   
Sbjct: 702 DI--YTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIF 759

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + L+W +      ++  +IDG  + G+ D  + +++ +E+ +CKP   T+ +L
Sbjct: 760 RGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAML 812



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 131/273 (47%), Gaps = 4/273 (1%)

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+ +L++   R         L   +      +P   TY ++I   C+   +  A    + 
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G +P A TFN LI G+ +   +  A+ + ++M   G+  D V++++LI+G+C  G+
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +++ L+L  E++     P++YT   L+  LC   R  +    L+++K     P    Y  
Sbjct: 215 VDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++D +C+    +EA  ++ EM +    P  VT T ++  +C +GRM  A+ +F  M   G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C P+  T N+++      G   +A  ++ +  E
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRE 363



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/328 (20%), Positives = 127/328 (38%), Gaps = 24/328 (7%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           GL F++   +   +  S   Y +V+  L +   +     ++  M S G  P+       V
Sbjct: 494 GLSFID-EMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSV 552

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
            +    G+   A+ ++ + + G + +    YN+L++        D AV + K    + S 
Sbjct: 553 RAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASM 612

Query: 259 PDTWTFNIL----------------IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           P+ +TF IL                   + +  E+   FE F  M           Y  +
Sbjct: 613 PNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAI 672

Query: 303 ISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + G     R++EV      +KE       + D+  YTS+++ +CKL     A  +   M 
Sbjct: 673 LEGFSEERRLDEVTSLVSHMKEDDLP--LNEDI--YTSLVNCFCKLRMYPDAWALLCSMI 728

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G  P+ +++  L+ GF   G    A+ +   +    Y  D + +  +IDG  R G  +
Sbjct: 729 GHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPD 788

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINAL 447
               +   ++     P+  T+ +L   L
Sbjct: 789 MCHDMISILEQMKCKPSDETYAMLTEEL 816



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 2/124 (1%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           +L LN     Y  ++   C++ ++     +   M   G LPN    ++ +S     G+ D
Sbjct: 696 DLPLNEDI--YTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQAD 753

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            AK +    R  E      ++  +++ L++Q + D    M     ++  +P   T+ +L 
Sbjct: 754 RAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLT 813

Query: 269 QGLS 272
           + LS
Sbjct: 814 EELS 817


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 210/434 (48%), Gaps = 6/434 (1%)

Query: 138 LGLKFLEFSRVNLSLNHS-----FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           LG +  E  R+   + H+       T N+++  LC+    +    +F+     G  P+  
Sbjct: 400 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 459

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +    + G+ D A  L  +        +  +Y SL+         ++   +FKE 
Sbjct: 460 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 519

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            R   +PD    N  +  + + GEV+K    F D+ S+G  PD+ +Y+ LI GL +  + 
Sbjct: 520 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 579

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                +   +K +  F+ D   Y +V+ G+CK GK+ KA  I  EM    ++P+  T+  
Sbjct: 580 RETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 638

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           ++DG  K+  +  A  + E   S G   +VV +SSLIDG+ + G++++   + +EM  K 
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 698

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L+PNVYT+  L++AL K   +N+A    + +K     P  + Y+ +I+G C+    ++A 
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           V   +M+++   P+ VT+T +I G    G + +A S+F +    G  PD  + N+LI  +
Sbjct: 759 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 818

Query: 553 LKGGMPNEAFRIMQ 566
                  EA+++ +
Sbjct: 819 SNANRAMEAYQVFE 832



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 194/395 (49%), Gaps = 4/395 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L + G  D    +F+ M   GH  N  +    + +    G+ +    +  + 
Sbjct: 460 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 519

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     + N+ ++ + K    ++   +F++       PD  +++ILI GL++ G+ 
Sbjct: 520 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 579

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++    F+ M   G + D   YN ++ G C+  +V + +E+L+E+K K    P V TY +
Sbjct: 580 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC-VQPTVATYGA 638

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G  K+ ++D+A  ++ E  S GI+ + V ++ LIDGFGKVG +  A  + E M+  G
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 698

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++SL+D   +  ++N+ L     MK     PN YT++ILIN LC+  + N A 
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F + ++   LVP    Y  +I G  K GN+ +A  +    +     PD  +F  LI G 
Sbjct: 759 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 818

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               R +EA  +F +    GC    I + S IS L
Sbjct: 819 SNANRAMEAYQVFEETRLRGC---RINIKSCISLL 850



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 194/410 (47%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  +    + D M      PN   +   V    +A K + A  +    
Sbjct: 390 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 449

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y SL++ L K+   DEA  +F++        +   +  LI+     G  
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 509

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   + F ++   GC PD+   NT +  + +  EV +G  + ++++    F PDV +Y+ 
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR-SYGFLPDVRSYSI 568

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K G+  + + I++ M   G    A  +N ++DGF K G +  A  + E M    
Sbjct: 569 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 628

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V T+ +++DG  +  +L++   L +E K K +  NV  ++ LI+   K  R+++A 
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 688

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    L P  + +N ++D   KA  ++EA V    M+E +C P+  T++ILI G 
Sbjct: 689 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 748

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   +  +A   +  M + G  P+ +T  ++IS L K G   +A+ + +R
Sbjct: 749 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 798



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 205/447 (45%), Gaps = 35/447 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G     + +F  M ++  +P +      +     AG+ + A  LL + 
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK--------------------------- 250
           R      S   +NS+L  L K+   DEA+ +F+                           
Sbjct: 346 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVE 405

Query: 251 EYFRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           E +R+  +       P+  T NI++  L +  ++++A++ F      GC+PD VTY +LI
Sbjct: 406 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLI 465

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GL +  +V   + L +++   +  + + V YTS+I  +   G+ +    I+ E+   G 
Sbjct: 466 DGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 524

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP     N  +D   K G +     + E + S+G+LPDV ++S LI G  + GQ  +   
Sbjct: 525 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 584

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +   MK +  + +   +  +++  CK  +++ A   L+++K   + P    Y  ++DG  
Sbjct: 585 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 644

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K   +DEA ++  E + K  + + V ++ LI G    GR+ EA  I  +M++ G  P+  
Sbjct: 645 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 704

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASE 570
           T NSL+  L+K    NEA    Q   E
Sbjct: 705 TWNSLLDALVKAEEINEALVCFQSMKE 731



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 192/398 (48%), Gaps = 6/398 (1%)

Query: 172 HD--SVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
           HD  +++ V + M   G+ LPN        ++ +RA + D A   ++  R  +   +   
Sbjct: 123 HDLAALEKVLEEMAVLGYGLPNQACAHL-AAALVRARRLDDAVLAVAVMRRLKFRPAFSA 181

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y  L+ AL +    + A+ + ++   +  +     F  L++ L+R G+V  A     ++ 
Sbjct: 182 YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK 241

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                PDIV YN  I    +   V    +   E+K +    PD V+YTS+I   CK G++
Sbjct: 242 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG-LKPDDVSYTSMIWVLCKAGRL 300

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  ++ +M +    P A  +N +I G+G  G    A  + ER+   G +P VV+F+S+
Sbjct: 301 GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSI 360

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +    +  ++++ L L + MK K+  PN  T+ I+I+ LC   R+ +A R L +++   L
Sbjct: 361 LTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 419

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P     N ++D  CKA  ++EA  I     ++ C PD VT+  LI G   KG++ EA  
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 479

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +F KML  G   + +   SLI      G   +  +I +
Sbjct: 480 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 517



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 182/386 (47%), Gaps = 3/386 (0%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           L D+V  V   MR     P        + +   A + + A  LL Q +     +   ++ 
Sbjct: 160 LDDAVLAV-AVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 218

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           +L+ AL ++    +A+ +  E      +PD   +N+ I    + G V  A++FF+++ + 
Sbjct: 219 TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQ 278

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  PD V+Y ++I  LC+   +    EL  +++ +    P    Y ++I GY   G+ + 
Sbjct: 279 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFED 337

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +   +   G  PS V+FN ++   GK   +  A  + E M      P+  T++ +ID
Sbjct: 338 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNIIID 396

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
             C  G++ +  ++ DEM+  +L PN+ T  I+++ LCK  +L +A +  +        P
Sbjct: 397 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 456

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  +IDG  K G VDEA  +  +M +     + V +T LI    + GR  +   IF
Sbjct: 457 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIF 516

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGG 556
            +++R GC PD   +N+ + C+ K G
Sbjct: 517 KELIRRGCKPDLTLLNTYMDCVFKAG 542



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 2/336 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L  ALV+    D+AV       RL  +P    + +LI  L+     ++A E    M   G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
               +  + TL+  L R  +VA    L+ EVK  S   PD+V Y   I  + K G +D A
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVK-GSCLEPDIVLYNVCIDCFGKAGNVDMA 268

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
              ++E+ + G+KP  V++  +I    K G +  AE +  +M +   +P    ++++I G
Sbjct: 269 WKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 328

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y   G+     KL + ++ +   P+V +F  ++  L K+ ++++A    + +K  D  P 
Sbjct: 329 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPN 387

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +ID  C  G V+EA  I+ EME     P+ +T  I++   C   ++ EA  IF 
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              + GC PD +T  SLI  L K G  +EA+R+ ++
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK 483



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 191/419 (45%), Gaps = 9/419 (2%)

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           H F T   ++R+L   G       + D ++     P+  +    +    +AG  D A   
Sbjct: 215 HLFTT---LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKF 271

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             + +   +      Y S++  L K     EA  +F +     S P  + +N +I G   
Sbjct: 272 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 331

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G  + A++    +   GC P +V++N++++ L +  +V     L + +K  +E  P+  
Sbjct: 332 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE--PNSS 389

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY  +I   C  G++++A  I +EM    + P+ +T N+++D   K   +  A  + E  
Sbjct: 390 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 449

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALCKEN 451
              G  PD VT+ SLIDG  + GQ+++  +L ++M   G N +P VYT   LI       
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS--LIRNFFIHG 507

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R  D  +  K+L      P   + N  +D   KAG V++  +I  ++      PD  +++
Sbjct: 508 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 567

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ILI G    G+  E  +IF+ M + G A D    N+++    K G  ++A+ I++   E
Sbjct: 568 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 626



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 150/300 (50%), Gaps = 1/300 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++Y++++  L + G       +F  M+  G   ++      V    ++GK   A  +L +
Sbjct: 564 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 623

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   V  +   Y ++++ L K +  DEA  +F+E      + +   ++ LI G  ++G 
Sbjct: 624 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 683

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A+    +M   G +P++ T+N+L+  L +  E+       + +K + +  P+  TY+
Sbjct: 684 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK-EMKCPPNTYTYS 742

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G C++ K +KA   + +M   G+ P+ VT+  +I G  KVGN+  A  + ER  + 
Sbjct: 743 ILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKAN 802

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD  +F++LI+G     +  +  ++ +E + +    N+ +   L++AL K   L  A
Sbjct: 803 GGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 8/270 (2%)

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           R+++      +++ +KF+  FS     YT +I    +  + ++A  +  +M   G +   
Sbjct: 159 RLDDAVLAVAVMRRLKFRPAFS----AYTVLIGALAEARRPERALELLRQMQEVGYEVGV 214

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             F  L+    + G +  A  + + +      PD+V ++  ID + + G ++   K   E
Sbjct: 215 HLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHE 274

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           +K + L P+  ++T +I  LCK  RL +A     Q++    VP  + YN +I G+  AG 
Sbjct: 275 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 334

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            ++A  ++  + E+ C P  V+F  ++     K ++ EA+S+F ++++    P+  T N 
Sbjct: 335 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNI 393

Query: 548 LISCLLKGGMPNEAFRI---MQRASEDQNL 574
           +I  L  GG   EA+RI   M+ AS   NL
Sbjct: 394 IIDMLCLGGRVEEAYRILDEMEHASLFPNL 423


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 188/361 (52%), Gaps = 7/361 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMR---SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           Y  VM  LC+ G     Q  FD +R        P++ +    + +  + G  D A  LL+
Sbjct: 181 YGTVMDGLCKKG---HTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLN 237

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + +   +      Y SL++ L K +  ++   +F E   L   PD  TFN +I GL + G
Sbjct: 238 EMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEG 297

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +V+ A E    M   G  P+ +TYN ++ G C   ++ R   +   +  K    PD+++Y
Sbjct: 298 KVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG-IEPDIISY 356

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I+GY +  KMDKA  ++ E++  G+KPS VT +VL+ G  +VG    A+   + M +
Sbjct: 357 TALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQA 416

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G++P++ T  +L+ GY +NG + + +    +++ +    N+  +T +IN LCK  +L+ 
Sbjct: 417 AGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDK 476

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    ++L    L P    Y  +I G+C+ G +DEA  ++ +ME+  C PD  T+ +++ 
Sbjct: 477 AHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVR 536

Query: 516 G 516
           G
Sbjct: 537 G 537



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 190/354 (53%), Gaps = 7/354 (1%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P EV     MY ++++ L K+ +  +A  + +   +  ++PDT  +NI+I    + G +
Sbjct: 175 EPDEV-----MYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGML 229

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M      PDI+TY +LI GL ++++  +   L  E+       PDV T+ S
Sbjct: 230 DGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEM-IHLNIYPDVCTFNS 288

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G CK GK++ A  I   M   G++P+ +T+NV++DG+   G M  A  + + M+  G
Sbjct: 289 VIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG 348

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++++++LI+GY    ++++ ++L  E+    L P++ T ++L+  L +  R   A+
Sbjct: 349 IEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAK 408

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F  +++    +P  + +  ++ G+ K G V+EA     ++E +R   +   +T +I G 
Sbjct: 409 IFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGL 468

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C  G++ +A + F K+  IG  PD IT  ++IS   + G+ +EA + M R  ED
Sbjct: 469 CKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA-KDMLRKMED 521



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 187/408 (45%), Gaps = 5/408 (1%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D    +F  M +   LP++      + + +      +   +  +     + +  F  +++
Sbjct: 54  DDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTV 113

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG- 291
           +N+    +  D    +   +F+     +  TF  LI+GL    +VK A   F  +     
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C PD V Y T++ GLC+     +  +LL+ ++ +    PD   Y  VI  +CK G +D A
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLME-QGITKPDTCIYNIVIDAFCKDGMLDGA 232

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
           T + NEM    I P  +T+  LIDG GK+        +   M+     PDV TF+S+IDG
Sbjct: 233 TSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDG 292

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G++    ++   M  K + PN  T+ ++++  C   ++  ARR    +    + P 
Sbjct: 293 LCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPD 352

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              Y  +I+G+ +   +D+A  +  E+ +   KP  VT ++L+ G    GR   A   F+
Sbjct: 353 IISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFD 412

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQL 576
           +M   G  P+  T  +L+    K G+  EA   F  ++R  ED N+Q+
Sbjct: 413 EMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 177/383 (46%), Gaps = 4/383 (1%)

Query: 196 FFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           F VS+     KC D A  L  Q    +   S   ++ LL ALV   +    V +F+E  +
Sbjct: 41  FGVSNEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHK 100

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           L    D +  + ++     +      F         G   + VT+ TLI GL   N+V  
Sbjct: 101 LRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKD 160

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              L K++  ++   PD V Y +V+ G CK G   KA  +   M     KP    +N++I
Sbjct: 161 AVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVI 220

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           D F K G +  A  +   M      PD++T++SLIDG  +  Q  +   L  EM   N+ 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY 280

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+V TF  +I+ LCKE ++ DA   +  +    + P    YN V+DG+C  G +  A  I
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              M +K  +PD +++T LI G+  K +M +A+ +F ++ + G  P  +T + L+  L +
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400

Query: 555 GGMPNEA---FRIMQRASEDQNL 574
            G    A   F  MQ A    NL
Sbjct: 401 VGRTECAKIFFDEMQAAGHIPNL 423



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 164/337 (48%), Gaps = 11/337 (3%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           L + L  L+  E ++ L        FLE   ++L++     T+N V+  LC+ G  +  +
Sbjct: 254 LIDGLGKLSQWEKVRTL--------FLEM--IHLNIYPDVCTFNSVIDGLCKEGKVEDAE 303

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            +  YM   G  PN       +      G+   A+ +        +      Y +L+N  
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGY 363

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
           V++   D+A+ +F+E  +   +P   T ++L++GL  +G  + A  FF +M + G  P++
Sbjct: 364 VEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNL 423

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            T+ TL+ G  +   V        +++ + E   ++  YT+VI+G CK GK+DKA   + 
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRRE-DTNIQIYTAVINGLCKNGKLDKAHATFE 482

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           ++   G+ P  +T+  +I G+ + G +  A+ M  +M   G LPD  T++ ++ G+ R+ 
Sbjct: 483 KLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSS 542

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           ++++      E+ GK+ S    T  +L++ + ++  L
Sbjct: 543 KVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSL 579


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 211/443 (47%), Gaps = 39/443 (8%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T ++++  LCE   L D++  + D  +  G  P+   I   +S   + G  D A+     
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNKVVG--PSIVSINTIMSKFCKVGLIDVARSFFCL 296

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +   +F YN LL+ L    + DEA+    +  +   +PD  T+N L +G   +G 
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGL 356

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A +    M   G +PD+VTY TLI G C++  +    +L +E      F  +V+ Y 
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQET-LSRGFKLNVIFYN 415

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM--- 393
            ++S  CK+G++++A  +++EM +  ++P  + +++LI G  K G +  A  + E+M   
Sbjct: 416 MLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLK 475

Query: 394 --------------------------------LSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
                                                + DVV ++ +IDGY R   + + 
Sbjct: 476 RKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           ++L  +M  + ++P+V TF  LIN  C+   L +AR+ L+ ++   LVP    Y  +++ 
Sbjct: 536 MQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA 595

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +C+ GN+ E    + EME     P  VT+T+LI G C + +M E++ +   M   G  PD
Sbjct: 596 YCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPD 655

Query: 542 DITVNSLISCLLKGGMPNEAFRI 564
            +T N++I C  KG    +A ++
Sbjct: 656 SVTYNTIIQCFCKGKEITKALQL 678



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 210/430 (48%), Gaps = 12/430 (2%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-----NSPMIEFFVSSCIRAGK 206
           L H   +YN+++  LC  G  D      D M   G  P     N+    F +   +   +
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
               K LL    P  VT     Y +L+    +  N +EA+ + +E      + +   +N+
Sbjct: 362 KVVQKMLLQGLNPDLVT-----YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L+  L ++G +++A   F +M +    PD + Y+ LI GLC+   V R ++L ++++ K 
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           +F P      +V+ G  K G + +A   ++      +    V +N++IDG+ ++  +  A
Sbjct: 477 KF-PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +  +M+  G  P VVTF++LI+G+CR G L +  K+ + ++ K L P+V T+T L+NA
Sbjct: 536 MQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA 595

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            C+   + +   FL +++ N +VP    Y  +I G C+   + E+  ++  M  K   PD
Sbjct: 596 YCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPD 655

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            VT+  +I   C    + +A+ ++N ML   C P  +T   LI+ L   G   +  R M 
Sbjct: 656 SVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR-MV 714

Query: 567 RASEDQNLQL 576
            + ED+N+ L
Sbjct: 715 VSIEDRNITL 724



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 202/439 (46%), Gaps = 36/439 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN + +    +GL    + V   M   G  P+       +    + G  + A  L  + 
Sbjct: 343 TYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQET 402

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++   YN LL+ L K    +EA+ +F E   L  +PD   ++ILI GL + G V
Sbjct: 403 LSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFV 462

Query: 278 KKAFEFFYDM-----------------GSF------------------GCSPDIVTYNTL 302
           ++A++ +  M                 G F                      D+V YN +
Sbjct: 463 QRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIM 522

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G  R++ +A   +L  ++  +   +P VVT+ ++I+G+C+ G + +A  +   +   G
Sbjct: 523 IDGYVRLDGIAEAMQLYYKM-IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + PS VT+  L++ + +VGNM    +    M +   +P  VT++ LI G CR  ++++ L
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESL 641

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L + M  K L P+  T+  +I   CK   +  A +    +  ++  P    Y  +I+  
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G++ + + +V  +E++     KVT+  +I  HC KG++ +A+  FN+ML  G     
Sbjct: 702 CIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISI 761

Query: 543 ITVNSLISCLLKGGMPNEA 561
              +++I+ L K G+  EA
Sbjct: 762 RDYSAVINRLCKRGLITEA 780



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 167/394 (42%), Gaps = 38/394 (9%)

Query: 151 SLNHSFKT----YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           +L+  FK     YN+++  LC++G  +    +FD M +    P+  +    +    + G 
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A  L  Q R        F   ++L  L K  N  EA   F  + R+    D   +NI
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNI 521

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK- 325
           +I G  R+  + +A + +Y M   G +P +VT+NTLI+G CR  ++    ++L+ ++ K 
Sbjct: 522 MIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 326 ---------------------------------SEFSPDVVTYTSVISGYCKLGKMDKAT 352
                                            +   P  VTYT +I G C+  KM ++ 
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESL 641

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +   M + G+ P +VT+N +I  F K   +  A  +   ML     P  VT+  LI+  
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C  G L    ++   ++ +N++    T+  +I A C + +++ A  +  Q+     V   
Sbjct: 702 CIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISI 761

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
             Y+ VI+  CK G + EA      M  +   PD
Sbjct: 762 RDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 163/357 (45%), Gaps = 14/357 (3%)

Query: 234 NALVKQNNADEAVY--MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           N +V Q     ++   +  E FR +   +   +++L    SR   +  A      M    
Sbjct: 142 NLIVDQGLGSASIICDLLLEKFRNWD-SNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLN 200

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEV--KFKSEFSPDVVTYTSV-ISGYCKLGKM 348
               + TYN+L+  +       R  +++ +V  + K   +P     TS+ I G C+  K+
Sbjct: 201 FQASVPTYNSLLHNM-------RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKL 253

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A    ++ N   + PS V+ N ++  F KVG +  A      M+  G L D  +++ L
Sbjct: 254 EDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNIL 312

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           + G C  G +++ L   D+M+   + P+V T+  L         ++ AR+ ++++    L
Sbjct: 313 LHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGL 372

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  +I G C+ GN++EA  +  E   +  K + + + +L+   C  GR+ EA++
Sbjct: 373 NPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALT 432

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPL 585
           +F++M  +   PD I  + LI  L K G    A+++ ++    +       ++AV L
Sbjct: 433 LFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 128/285 (44%), Gaps = 2/285 (0%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           RLD     ++ L +  +   +  S  T+N ++   C  G     + + + +R  G +P+ 
Sbjct: 528 RLDGIAEAMQ-LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV 586

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +++    G        L +     V  +   Y  L+  L +QN   E++ + + 
Sbjct: 587 VTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEY 646

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
            +     PD+ T+N +IQ   +  E+ KA + +  M    C P  VTY  LI+ LC   +
Sbjct: 647 MYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGD 706

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +     ++  ++ ++  +   VTY ++I  +C  G++ KA G +N+M + G   S   ++
Sbjct: 707 LKDVDRMVVSIEDRN-ITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYS 765

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            +I+   K G +  A+Y    MLS G  PD     ++++ + + G
Sbjct: 766 AVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 131/303 (43%), Gaps = 3/303 (0%)

Query: 159 YNLVMRSLCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           YN+++     + G+ +++Q+ +  M   G  P+       ++   R G    A+ +L   
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYK-MIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  S   Y +L+NA  +  N  E  +   E       P   T+ +LI+GL R  ++
Sbjct: 578 RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKM 637

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++ +    M + G  PD VTYNT+I   C+  E+ +  +L   +   +   P  VTY  
Sbjct: 638 HESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN-CDPTQVTYKV 696

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C  G +     +   +    I    VT+  +I      G +  A     +ML+ G
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++  +  +S++I+  C+ G + +       M  + ++P+      ++NA  ++   +   
Sbjct: 757 FVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVF 816

Query: 458 RFL 460
            FL
Sbjct: 817 EFL 819


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 192/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+  L D  + VF  M  +G  PN+      +   +  GK      +L + 
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + Y SLLN L K     EA + F    R   +P   T+ ILI G +  G +
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGAL 355

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +   F   M   G SPD   +N   S   +   + +  ++  +++ +   SP+VV Y +
Sbjct: 356 SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR-QHGLSPNVVNYGA 414

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CKLG++D A   +N+M + G+ P+ V FN L+ G   V     AE +   ML  G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V F++LI   C  G++ +G +L D M+   + P+ +++T LI+  C   R ++A 
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    L P    YN ++ G+C A  +D+A  +  EM  K   P  VT+  ++ G 
Sbjct: 535 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               R  EA  ++  M+  G   D  T N +++ L K    +EAF++ Q
Sbjct: 595 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ 643



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 189/404 (46%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y++V+      G  D    +F  M   G  P+       +    +A   D A+G+  Q 
Sbjct: 201 SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQM 260

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + + YN L++  +      E V M +E      +PD +T+  L+  L + G  
Sbjct: 261 IDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRC 320

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A  FF  M   G  P + TY  LI G      ++  H  L ++  ++  SPD   +  
Sbjct: 321 REARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFL-DLMVENGLSPDHHIFNI 379

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
             S Y K G +DKA  I+N+M   G+ P+ V +  LID   K+G +  AE    +M++ G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P++V F+SL+ G C   +  +  +L  EM  + + PN   F  LI  LC   R+ + R
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R +  ++   + P  F Y P+I G+C  G  DEA  +   M      P +VT+  L+ G+
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGY 559

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C   R+ +A  +F +MLR G  P  +T N+++  L +    +EA
Sbjct: 560 CSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 603



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 203/430 (47%), Gaps = 1/430 (0%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           +F   S +   +     TY +++      G    +    D M  +G  P+  +   F S+
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             + G  D A  + ++ R   ++ +   Y +L++AL K    D+A   F +       P+
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 443

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
              FN L+ GL  + + ++A E  Y+M   G  P+ V +NTLI  LC V  V  G  L+ 
Sbjct: 444 IVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLID 503

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            ++      PD  +YT +ISGYC  G+ D+A  +++ M S G+ P+ VT+N L+ G+   
Sbjct: 504 LMEHVG-VRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 562

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             +  A  +   ML  G  P VVT+++++ G  +  + ++  +L   M       ++YT+
Sbjct: 563 SRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTY 622

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            I++N LCK N +++A +  + L    L      +  +I    K G  ++A  + A +  
Sbjct: 623 NIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPA 682

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
               P+ VT+ ++      +G + E  S+F+ M + G AP+   +N+L+  LL  G  + 
Sbjct: 683 NGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISR 742

Query: 561 AFRIMQRASE 570
           A   + +  E
Sbjct: 743 AGAYLSKLDE 752



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 187/402 (46%), Gaps = 10/402 (2%)

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR------PGEV 222
           +GL D++++ FD +       +       +++  RA    A++  +S F         +V
Sbjct: 28  LGLDDALKL-FDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKV 86

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
             +   Y+ L+    +  + +     F    +   + D    N L++GL     V +A +
Sbjct: 87  APNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMD 146

Query: 283 FFYD-MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK--FKSEFSPDVVTYTSVI 339
                M   GC PD V+Y  L+ GLC         ELL  +         P+VV+Y+ VI
Sbjct: 147 VLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVI 206

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +G+   G++DK   ++ EM   GI P  VT+  +IDG  K      AE + ++M+  G+ 
Sbjct: 207 NGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+  T++ LI GY   G+  + +++ +EM  + L P+ YT+  L+N LCK  R  +AR F
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
              +    + PK   Y  +I G+   G + E +  +  M E    PD   F I    +  
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            G + +A+ IFNKM + G +P+ +   +LI  L K G  ++A
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 169/367 (46%), Gaps = 13/367 (3%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVK---QNNADEAVYMFKEYFRLYSQ---PDTWTFNI 266
           LL   RP  V      +N LL A+ +    + ++ AV  F    R  S    P+  T++I
Sbjct: 40  LLHHARPASVRA----FNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSI 95

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI    R+G ++  F  F  +   G   D +  N L+ GLC    V    ++L +   + 
Sbjct: 96  LIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPEL 155

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIK--PSAVTFNVLIDGFGKVGNM 383
              PD V+YT ++ G C   + ++A  + + M +  G +  P+ V+++++I+GF   G +
Sbjct: 156 GCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQV 215

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                +   M+  G  PDVVT++++IDG C+    ++   +  +M      PN YT+  L
Sbjct: 216 DKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCL 275

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+      +  +  + L+++    L P  + Y  +++  CK G   EA      M  K  
Sbjct: 276 IHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGI 335

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           KP   T+ ILI G+  KG + E  S  + M+  G +PD    N   S   K GM ++A  
Sbjct: 336 KPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 395

Query: 564 IMQRASE 570
           I  +  +
Sbjct: 396 IFNKMRQ 402



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 150/324 (46%), Gaps = 17/324 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK----GLL 214
           +N ++ +LC +G     + + D M   G  P++      +S     G+ D A+    G++
Sbjct: 482 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMV 541

Query: 215 S-QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           S    P EVT     YN+LL+     +  D+A  +F+E  R    P   T+N ++ GL +
Sbjct: 542 SIGLSPTEVT-----YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 596

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
                +A E + +M + G   DI TYN +++GLC+ N V    ++ + +  K     +++
Sbjct: 597 TKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG-LQLNII 655

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T+T +I    K G+ + A  ++  + + G+ P+ VT+ ++ +   + G++   + +   M
Sbjct: 656 TFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAM 715

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P+    ++L+      G +++      ++  +N S    T ++L++    +   
Sbjct: 716 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQ 775

Query: 454 NDAR------RFLKQLKWNDLVPK 471
           + A+       FL +   + L+ K
Sbjct: 776 HHAKSLPEKYHFLNEANSSALIKK 799



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK-------ENRLNDARRFLKQLKWN 466
           R+  L+  LKL DE+       +V  F  L+ A+ +       E  ++   R +++   +
Sbjct: 26  RSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECS-D 84

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            + P    Y+ +I  FC+ G+++        + +   + D +    L+ G C   R+ EA
Sbjct: 85  KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144

Query: 527 ISIF-NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           + +   +M  +GC PD ++   L+  L       EA  ++   ++D   + P
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCP 196



 Score = 38.9 bits (89), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 30/164 (18%), Positives = 68/164 (41%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K L  + +N        TYN+++  LC+    D    +F  + S G   N       + +
Sbjct: 604 KELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 663

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            ++ G+ + A  L +      +  +   Y  +   L+++ + +E   +F    +  + P+
Sbjct: 664 LLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 723

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           +   N L++ L   G++ +A  +   +     S +  T + L+S
Sbjct: 724 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMS 767


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 215/451 (47%), Gaps = 35/451 (7%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSV---QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           L L  +  T N ++++L       SV   + +F  +   G   N+      +  C    K
Sbjct: 4   LHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENK 63

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A GL+ + +          YN++L+ L K+   +EA  +  +       P+  TFNI
Sbjct: 64  LSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNI 123

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L+ G  ++G +K+A E    M      PD+ TY TLI GLC+  ++     L  E++   
Sbjct: 124 LVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME-NL 182

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           +  P VVTY  +I+G  +     K   + +EM   G+KP+AVT+NV++  + K G M +A
Sbjct: 183 KLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 242

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
                +M   G+ PD VTF++L +GYC+ G+L++  ++ DEM  K L  N  T   +++ 
Sbjct: 243 GNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHT 302

Query: 447 LCKENRLNDARRFLK-------------------------------QLKWNDLVPKPFMY 475
           LC E +L+DA + L                                ++K  +++P    Y
Sbjct: 303 LCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITY 362

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
             +I G C++G  D++     E+ E    PD+ T+  +I+G+C +G++ +A    NKM++
Sbjct: 363 GTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVK 422

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               PD  T N L+  L   GM ++A ++ +
Sbjct: 423 KSFKPDLFTCNILVRGLCTEGMLDKALKLFK 453



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 206/416 (49%), Gaps = 7/416 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN ++  LC+ G L+++  ++ D M+++G  PN       VS   + G    A  ++  
Sbjct: 85  SYNTILDVLCKKGKLNEARDLLLD-MKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDI 143

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V      Y +L+  L K    DEA  +  E   L   P   T+N+LI G      
Sbjct: 144 MARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSS 203

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             K FE   +M   G  P+ VTYN ++    +  ++      L++++ +S FSPD VT+ 
Sbjct: 204 SLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKME-ESGFSPDCVTFN 262

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++ +GYCK G++ +A  + +EM+  G+K ++VT N ++        +  A  +       
Sbjct: 263 TLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKR 322

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           GY  D V++ +LI GY + G+        DEMK K + P++ T+  +I  LC+  + + +
Sbjct: 323 GYFVDEVSYGTLIMGYFKVGKSXX----WDEMKEKEIIPSIITYGTMIGGLCRSGKTDQS 378

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                +L  + LVP    YN +I G+C+ G VD+A     +M +K  KPD  T  IL+ G
Sbjct: 379 IDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRG 438

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            C +G + +A+ +F   +  G A D +T N++IS L + G   EAF ++    E +
Sbjct: 439 LCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKK 494



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 174/320 (54%), Gaps = 4/320 (1%)

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAF---EFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           RL+ +P+  T N LI+ L R       +     F D+   G   +  T+N LI G C  N
Sbjct: 3   RLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIEN 62

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           +++    L+ ++K  S F PD V+Y +++   CK GK+++A  +  +M + G+ P+  TF
Sbjct: 63  KLSEAIGLIGKMKHFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTF 121

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N+L+ G+ K+G +  A  + + M     LPDV T+++LI G C++G++++  +L DEM+ 
Sbjct: 122 NILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMEN 181

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
             L P+V T+ +LIN   + +        + +++   + P    YN V+  + K G +D 
Sbjct: 182 LKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDN 241

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A   + +MEE    PD VTF  L  G+C  GR+ EA  + ++M R G   + +T+N+++ 
Sbjct: 242 AGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILH 301

Query: 551 CLLKGGMPNEAFRIMQRASE 570
            L      ++A++++  AS+
Sbjct: 302 TLCGERKLDDAYKLLSSASK 321



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 176/385 (45%), Gaps = 5/385 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TY  ++  LC+ G  D    + D M +   LP+       ++ C           L+ +
Sbjct: 154 RTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDE 213

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +   YN ++   VK+   D A    ++       PD  TFN L  G  + G 
Sbjct: 214 MEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGR 273

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +AF    +M   G   + VT NT++  LC   ++   ++LL     +  F  D V+Y 
Sbjct: 274 LSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF-VDEVSYG 332

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GY K+GK    +  ++EM    I PS +T+  +I G  + G    +      +L  
Sbjct: 333 TLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLES 388

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PD  T++++I GYCR GQ+++     ++M  K+  P+++T  IL+  LC E  L+ A
Sbjct: 389 GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKA 448

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  K             +N +I G C+ G  +EA  ++AEMEEK+  PD  T   ++  
Sbjct: 449 LKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSA 508

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPD 541
               GRM EA    + ++  G   D
Sbjct: 509 LADAGRMKEAEEFMSGIVEQGKLQD 533



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 183/429 (42%), Gaps = 28/429 (6%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           NL L     TYN+++    E         + D M   G  PN+      V   ++ GK D
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A   L +      +     +N+L N   K     EA  M  E  R   + ++ T N ++
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             L    ++  A++        G   D V+Y TLI G  +V +     E+ ++     E 
Sbjct: 301 HTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEK-----EI 355

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P ++TY ++I G C+ GK D++    NE+   G+ P   T+N +I G+ + G +  A +
Sbjct: 356 IPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFH 415

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
            R +M+   + PD+ T + L+ G C  G L++ LKL      K  + +  TF  +I+ LC
Sbjct: 416 FRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLC 475

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK------- 501
           +E R  +A   L +++   L P  + +N ++     AG + EA   ++ + E+       
Sbjct: 476 EEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQT 535

Query: 502 ----------------RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
                              P+ V F+  I   C +G+  +A+ +  +  + G      T 
Sbjct: 536 ISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTY 595

Query: 546 NSLISCLLK 554
            SL+  L+K
Sbjct: 596 ISLMEGLIK 604


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 212/447 (47%), Gaps = 2/447 (0%)

Query: 120 KLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF 179
           K  P   + V++RL +    +++  +      L H  ++YN ++  +      D++  + 
Sbjct: 62  KPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQIL 121

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
             M   G  P+       V SC++A K      ++   R  +   +   Y +L+ A    
Sbjct: 122 GEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAV 181

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N++D  + +F++   L  +P    F  LI+G ++ G V  A     +M S     DIV Y
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N  I    +V +V    +   E++  +   PD VTYTS+I   CK  ++D+A  ++  + 
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIE-ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                P    +N +I G+G  G    A  + ER  + G +P V+ ++ ++    + G+++
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L++ +EMK K+ +PN+ T+ ILI+ LC+  +L+ A      ++   L P     N ++
Sbjct: 361 EALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMV 419

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK+  +DEA  I  +M+ K C PD++TF  LI G    GR+ +A  I+ KML   C 
Sbjct: 420 DRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCR 479

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
            + I   SLI      G   +  +I +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYK 506



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 194/397 (48%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++  L ++G  D    +++ M       NS +    + +    G+ +    +    
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +    + N+ ++ + K    ++   MF+E       PD  +++ILI GL + G  
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFA 568

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            + +E FY M   GC  D   YN +I G C+  +V + ++LL+E+K K  F P VVTY S
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGS 627

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+ ++D+A  ++ E  S  I+ + V ++ LIDGFGKVG +  A  + E ++  G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++SL+D   +  ++N+ L     MK    +PN  T+ ILIN LCK  + N A 
Sbjct: 688 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F ++++   + P    Y  +I G  KAGN+ EA  +    +     PD   +  +I G 
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
               R ++A S+F +  R G    + T   L+  L K
Sbjct: 808 SNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHK 844



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 213/441 (48%), Gaps = 3/441 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L  ++++      L+  E  + + + N S  TYN+++  LC  G  D    + D M+  G
Sbjct: 350 LTCLRKMGKVDEALRVFEEMKKDAAPNLS--TYNILIDMLCRAGKLDCAFELRDSMQKAG 407

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
             PN   +   V    ++ K D A  +  Q      T     + SL++ L K    D+A 
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            ++++      + ++  +  LI+     G  +   + + DM +  CSPD+   NT +  +
Sbjct: 468 KIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCM 527

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
            +  E  +G  + +E+K +  F PD  +Y+ +I G  K G  ++   ++  M   G    
Sbjct: 528 FKAGEPEKGRAMFEEIKSR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
              +N++IDGF K G +  A  + E M + G+ P VVT+ S+IDG  +  +L++   L +
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           E K K +  NV  ++ LI+   K  R+++A   L++L    L P  + +N ++D   KA 
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAE 706

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            ++EA V    M+E +C P++VT+ ILI G C   +  +A   + +M + G  P  I+  
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
           ++IS L K G   EA  +  R
Sbjct: 767 TMISGLAKAGNIAEAGALFDR 787



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 203/448 (45%), Gaps = 37/448 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC+    D    +F+++  +  +P +      +     AGK D A  LL + 
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R      S   YN +L  L K    DEA+ +F+E  +  + P+  T+NILI  L R G++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEE-MKKDAAPNLSTYNILIDMLCRAGKL 393

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AFE    M   G  P++ T N ++  LC+  ++     + +++ +K   +PD +T+ S
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKV-CTPDEITFCS 452

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG------------------- 378
           +I G  K+G++D A  IY +M     + +++ +  LI  F                    
Sbjct: 453 LIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQN 512

Query: 379 ----------------KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                           K G       M E + S  ++PD  ++S LI G  + G  N+  
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETY 572

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L   MK +    +   + I+I+  CK  ++N A + L+++K     P    Y  VIDG 
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K   +DEA ++  E + KR + + V ++ LI G    GR+ EA  I  ++++ G  P+ 
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNV 692

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
            T NSL+  L+K    NEA    Q   E
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKE 720



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 192/418 (45%), Gaps = 2/418 (0%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           SL+     YN+ + S  ++G  D     F  + ++G  P+       +    +A + D A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +            T+ YN+++         DEA  + +      S P    +N ++  
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L ++G+V +A   F +M     +P++ TYN LI  LCR  ++    EL   ++ K+   P
Sbjct: 353 LRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQ-KAGLFP 410

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           +V T   ++   CK  K+D+A  I+ +M+     P  +TF  LIDG GKVG +  A  + 
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIY 470

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E+ML      + + ++SLI  +  +G+   G K+  +M  +N SP++      ++ + K 
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKA 530

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
                 R   +++K    VP    Y+ +I G  KAG  +E   +   M+E+ C  D   +
Sbjct: 531 GEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            I+I G C  G++ +A  +  +M   G  P  +T  S+I  L K    +EA+ + + A
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 150/316 (47%), Gaps = 6/316 (1%)

Query: 267 LIQGLSRIGEVKKAFEFF--YDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +I  L R+ +V +A E+F  Y+  +     P+  +YN+L+  + R        ++L E+ 
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMS 125

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
               F P V T   ++    K  K+ +   +   M     +P+   +  LI  F  V + 
Sbjct: 126 VAG-FGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHS 184

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                + ++M   GY P V  F++LI G+ + G+++  L L DEMK  +L  ++  + + 
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I++  K  +++ A +F  +++ N L P    Y  +I   CKA  +DEA  +   +E+ R 
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P    +  +I+G+   G+  EA S+  +    G  P  I  N +++CL K G  +EA R
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALR 364

Query: 564 IMQRASEDQNLQLPSW 579
           + +   +D    L ++
Sbjct: 365 VFEEMKKDAAPNLSTY 380



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 153/343 (44%), Gaps = 34/343 (9%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN + +   +  N  M  + + G  +  + +F+ ++S   +P++      +   I+AG  
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFA 568

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +    L    +     + T  YN +++   K    ++A  + +E      +P   T+  +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE------ 321
           I GL++I  + +A+  F +  S     ++V Y++LI G  +V  +   + +L+E      
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 322 ------------------------VKFKS----EFSPDVVTYTSVISGYCKLGKMDKATG 353
                                   V F+S    + +P+ VTY  +I+G CK+ K +KA  
Sbjct: 689 TPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
            + EM   G+KPS +++  +I G  K GN+  A  + +R  + G +PD   ++++I+G  
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              +      L +E + + L  +  T  +L++ L K + L  A
Sbjct: 809 NGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 183/362 (50%), Gaps = 12/362 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC++G  +    +   MRSD   P +      ++   R+G+ + A  L ++  
Sbjct: 231 YNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEME 290

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP----DTWTFNILIQGLSRI 274
             ++  +    N+L++ + K N    AV    E+FR+  Q     +  T+ + I     +
Sbjct: 291 NAQIEPNVITLNTLVDGMCKHNRISTAV----EFFRVMQQKGLKGNNVTYTVFINAFCNV 346

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             + KA EF  +M   GC PD V Y TLI GL +   +     ++ ++K ++ F  D V 
Sbjct: 347 NNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLK-EAGFCLDRVC 405

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-VSAEYMRERM 393
           Y  +IS +CK  K+D+A    NEM   G+KP +VT+N LI  F K+GN  ++ ++M++  
Sbjct: 406 YNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMT 465

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILINALCKEN 451
              G  P V T+ +LI  YC N  +++ +K+  EM      + PN   + ILI++LCK+ 
Sbjct: 466 EEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQT 525

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++N A   L  +K+  ++P    YN +         +D+A  ++  M E+ C PD +T  
Sbjct: 526 QVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITME 585

Query: 512 IL 513
           IL
Sbjct: 586 IL 587



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 5/374 (1%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D   GL+S+F    +   T     L++ L +  N + A  +      L    D    N
Sbjct: 97  KEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCN 156

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            L+ GL +  E  K       M      P ++T+  LI+ LC+   +    E+ +++K +
Sbjct: 157 ALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGE 216

Query: 326 SE-----FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            E      +PD + Y ++I G CK+G+ ++A  +  +M S    P+  TFN LI+G+ + 
Sbjct: 217 KEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRS 276

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  +   M +    P+V+T ++L+DG C++ +++  ++    M+ K L  N  T+
Sbjct: 277 GEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTY 336

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           T+ INA C  N +N A  FL ++  +   P   +Y  +I G  +AG +D+A+ +V++++E
Sbjct: 337 TVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKE 396

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
                D+V + +LI   C K ++  A    N+M   G  PD +T N+LIS   K G    
Sbjct: 397 AGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKL 456

Query: 561 AFRIMQRASEDQNL 574
           A + M++ +E++ L
Sbjct: 457 AHKFMKKMTEEEGL 470



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 178/352 (50%), Gaps = 4/352 (1%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V   T MYN+L++ L K    +EA+ +  +       P T TFN LI G  R GE++ A 
Sbjct: 224 VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAH 283

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           + F +M +    P+++T NTL+ G+C+ N ++   E  + ++ K     + VTYT  I+ 
Sbjct: 284 KLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKG-LKGNNVTYTVFINA 342

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +C +  M+KA    +EM+  G  P AV +  LI G  + G +  A  +  ++   G+  D
Sbjct: 343 FCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLD 402

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            V ++ LI  +C+  +L++  +  +EM+   + P+  T+  LI+   K      A +F+K
Sbjct: 403 RVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462

Query: 462 QLKWND-LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK--PDKVTFTILIIGHC 518
           ++   + L P  F Y  +I  +C   N+DEA  I  EM     K  P+ V + ILI   C
Sbjct: 463 KMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLC 522

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            + ++  A+S+ + M   G  P+  T NS+   L      ++AF++M R  E
Sbjct: 523 KQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVE 574



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 2/154 (1%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--P 189
           ++ N KL  KF++       L+ +  TY  ++ + C     D    +F  M +      P
Sbjct: 450 KIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPP 509

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N+ +    + S  +  + + A  LL   +   V  +T  YNS+  AL  +N  D+A  + 
Sbjct: 510 NTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLM 569

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
                    PD  T  IL + LS +GE+ K  +F
Sbjct: 570 DRMVEQACNPDYITMEILTEWLSAVGEITKLKKF 603



 Score = 45.4 bits (106), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 44/90 (48%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T +YN L+++L KQ   + A+ +  +       P+T T+N + + L     + KAF+  
Sbjct: 510 NTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLM 569

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
             M    C+PD +T   L   L  V E+ +
Sbjct: 570 DRMVEQACNPDYITMEILTEWLSAVGEITK 599


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 198/408 (48%), Gaps = 3/408 (0%)

Query: 157 KTYNLVMR-SLCEMGLHDSVQVVFDYM-RSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGL 213
           +T N V+R  L   G     +  FD M R+ G + P+       V  C R G+ + A  L
Sbjct: 144 ETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADAL 203

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L+        + +     ++ A  +Q        +F+    + + P+   ++  I GL  
Sbjct: 204 LAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCE 263

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G VK+AF    +M   G  P++ T+ +LI GLC++  + R   L  ++   S + P+V 
Sbjct: 264 RGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVH 323

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TYT +I GYCK GK+ +A  +   M   G+ P+  T+  LI G  K G+   A  +  +M
Sbjct: 324 TYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKM 383

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G+LP++ T++++I G+C+ G++ +  K+      + L  +  T+TILI   CK+  +
Sbjct: 384 KLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHI 443

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A    KQ+      P    Y  +I  +C+   ++++  +  +       P K T+T +
Sbjct: 444 TCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSM 503

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           I G+C  G++  A+ +F +M++ GC PD IT  +LIS L K     EA
Sbjct: 504 IAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEA 551



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 189/393 (48%), Gaps = 2/393 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +++  ++   C  G  +    +   M + G   +S      V +  R G+      L  +
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y++ ++ L ++    +A ++ +E      +P+ +T   LI GL +IG 
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 277 VKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +++AF  F  +  S    P++ TY  +I G C+  ++AR   LL  +  +   +P+  TY
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM-VEQGLAPNTNTY 360

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+CK G  D+A  + N+M   G  P+  T+N +I GF K G +  A  +     S
Sbjct: 361 TTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATS 420

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D VT++ LI  +C+ G +   L L  +M  K+  P+++T+T +I   C++ ++  
Sbjct: 421 QGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQ 480

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           +++   +     LVP    Y  +I G+C+ G +  A  +   M +  C PD +T+  LI 
Sbjct: 481 SQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALIS 540

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
             C + R+ EA ++F  ML     P D+T  +L
Sbjct: 541 SLCKESRLEEARALFETMLDKHLVPCDVTRVTL 573



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 179/377 (47%), Gaps = 2/377 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T  +V+R+ C  G   +V  +F  M   G  PN      ++      G    A  +L + 
Sbjct: 218 TCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEM 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
               +  + + + SL++ L K    + A  +F +  +  S +P+  T+ ++I G  + G+
Sbjct: 278 VGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGK 337

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A      M   G +P+  TY TLI G C+     R  EL+ ++K +  F P++ TY 
Sbjct: 338 LARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEG-FLPNIYTYN 396

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+CK GK+ +A  +     S G+    VT+ +LI    K G++  A  + ++M   
Sbjct: 397 AIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEK 456

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD+ T++++I  YC+  Q+ Q  +L D+     L P   T+T +I   C+  +L  A
Sbjct: 457 SCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSA 516

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  +++  +  +P    Y  +I   CK   ++EA  +   M +K   P  VT   L   
Sbjct: 517 LKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYE 576

Query: 517 HCMKGRMVEAISIFNKM 533
           +C + ++  A+S  +++
Sbjct: 577 YCRRDKITIAVSFLDRL 593



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 181/368 (49%), Gaps = 5/368 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           V   L  +  T+  ++  LC++G +  + ++    ++S  + PN       +    + GK
Sbjct: 278 VGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGK 337

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A+ LL +     +  +T  Y +L++   K  + D A  +  +       P+ +T+N 
Sbjct: 338 LARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNA 397

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I G  + G++++A++      S G   D VTY  LI+  C+   +    +L K++  KS
Sbjct: 398 IIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKS 457

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD+ TYT++I+ YC+  +M+++  ++++  S G+ P+  T+  +I G+ ++G + SA
Sbjct: 458 -CHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSA 516

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + ERM+  G LPD +T+ +LI   C+  +L +   L + M  K+L P   T   L   
Sbjct: 517 LKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYE 576

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            C+ +++  A  FL +L   D   +    + ++      GN+D A++ +  + +K    D
Sbjct: 577 YCRRDKITIAVSFLDRL---DKRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVD 633

Query: 507 KVTFTILI 514
             T+T  I
Sbjct: 634 HATYTSFI 641



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 124/295 (42%), Gaps = 4/295 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G  D    + + M+ +G LPN       +    + GK   A  +L   
Sbjct: 359 TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMA 418

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    Y  L+    KQ +   A+ +FK+       PD  T+  +I    +  ++
Sbjct: 419 TSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQM 478

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +++ + F    S G  P   TY ++I+G CR+ ++    ++ + +  +    PD +TY +
Sbjct: 479 EQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERM-VQHGCLPDSITYGA 537

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +IS  CK  ++++A  ++  M    + P  VT   L   + +   +  A    +R+    
Sbjct: 538 LISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRL---D 594

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
                 T  +L+      G L+        +  K+ + +  T+T  IN+  + NR
Sbjct: 595 KRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNR 649


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 196/406 (48%), Gaps = 1/406 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +T N V+R+  + G     + VFD M + G L P++      +  C R G+ +    LL+
Sbjct: 150 ETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLT 209

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             +     +       ++    ++    +   +F+    + + P+   +   I GL +  
Sbjct: 210 VMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRA 269

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            VK+AF    +M + G  P++ T+ +LI+GLC++    R   L  ++   S + P+V TY
Sbjct: 270 YVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTY 329

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I GYCK GK+ +A  +   M   G+ P+  T+  LI G  K G+   A  +  +M  
Sbjct: 330 TVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRR 389

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G+ P++ T+++LIDG C+ G++ +  K+      + L  +  T+T++I   CK+  +  
Sbjct: 390 EGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITY 449

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     ++  N   P    Y  +I  +C+   ++E+  +  +       P K T+T +I 
Sbjct: 450 ALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIA 509

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           G+C  G+   A+ +F +M++ GC  D IT  +LIS L K     EA
Sbjct: 510 GYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEA 555



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 194/412 (47%), Gaps = 5/412 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T  +++R  C+ G    V  +F  M   G  PN      ++    +      A  +L + 
Sbjct: 222 TCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEM 281

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
               +  + + + SL+N L K    + A  +F +  +  S +P+  T+ ++I G  + G+
Sbjct: 282 VAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGK 341

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A      M   G +P+  TY TLISG C+        EL+ +++ +  F P++ TY 
Sbjct: 342 LARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMR-REGFQPNIYTYN 400

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G CK GK+ +A  +    N+ G++   VT+ V+I    K G++  A  +  RM   
Sbjct: 401 ALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAEN 460

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD+ T+++LI  YC+  Q+ +  KL D+     L P   T+T +I   CK  +   A
Sbjct: 461 GCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSA 520

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R  +++  N        Y  +I G CK   ++EA  +   M +KR  P +VT   L   
Sbjct: 521 LRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFE 580

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           +C + + V A+SI +   R+     + TVN L+  L   G   +A   +++A
Sbjct: 581 YCRREKAVVAVSILD---RLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKA 629



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 2/311 (0%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           ++   +  G + +A +  ++M S G    + T N ++         A   ++   +  + 
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD  ++ ++I G C+ G+M++   +   M   G      T  V++  F + G     
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +  RML  G  P+VV +++ IDG C+   + Q   + +EM  K L PNVYT T LIN 
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 447 LCKENRLNDA-RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           LCK      A R FLK +K +   P    Y  +I G+CK G +  A +++  M E+   P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +  T+T LI GHC +G    A  + NKM R G  P+  T N+LI  L K G   EA++++
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 566 QRASEDQNLQL 576
            R + +Q LQL
Sbjct: 420 -RMANNQGLQL 429



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 150/400 (37%), Gaps = 82/400 (20%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           +L LK ++ S    S   +  TY +++   C+ G     +++   M   G  PN+     
Sbjct: 311 RLFLKLIKSS----SYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTT 366

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +S   + G  + A  L+++ R      + + YN+L++ L K+    EA  + +      
Sbjct: 367 LISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQG 426

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI------------- 303
            Q D  T+ ++I    + G +  A + F  M   GC PDI TY TLI             
Sbjct: 427 LQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQ 486

Query: 304 ----------------------SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                                 +G C+V +      + + +  ++    D +TY ++ISG
Sbjct: 487 KLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERM-VQNGCQADSITYGALISG 545

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            CK  ++++A  +Y                                   E ML    +P 
Sbjct: 546 LCKESRLEEARALY-----------------------------------EGMLDKRLVPC 570

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            VT  +L   YCR  +    + + D +  +  +   +T  +L+  L     + DA  FLK
Sbjct: 571 EVTPVTLAFEYCRREKAVVAVSILDRLDKRRKN---HTVNVLVRKLSAIGHVEDASLFLK 627

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           +    DL      Y   I+  C A   ++   +  E+ EK
Sbjct: 628 KALDVDLAVDRLAYTSFINS-CYA---NKKYALATEISEK 663


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 206/415 (49%), Gaps = 8/415 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPN-SPMIEFFVSSCIRAGKCDAAKGLLS 215
           ++N+++++L   G L D+ Q  FD M S   +     M+  +   C+R G+ + A  LL 
Sbjct: 257 SHNILLKALLSAGRLKDACQH-FDEMSSPPDVVTYGTMVHGY---CVR-GELENAVKLLD 311

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  +  +Y S++  L  +    +A+ + ++        D   F  +I G    G
Sbjct: 312 EMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKG 371

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++  A   F +M   G + D VT+  LI+GLCR  E+     +L+E+  K     DVVTY
Sbjct: 372 DLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG-LDVDVVTY 430

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I GYCK G M +A  ++NEM    + P+ VT+  L DG  K G++ +A  +   M +
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   +V T++SLI+G C+ G L Q +++  EM+      +VYT+T LI+ LCK    + 
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR 550

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L+++    + P    YN +++GFC +G V+    ++  M EK  +P+ VT+  L+ 
Sbjct: 551 AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMK 610

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +C+   M     I+  M     AP++ T N LI    K     EA    Q   E
Sbjct: 611 QYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIE 665



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 181/380 (47%), Gaps = 3/380 (0%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           Y  V+  LC  G + D+++V+ D M   G   ++ +    +S     G   AA+ L  + 
Sbjct: 325 YTSVIALLCNKGQVSDALRVLED-MTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEM 383

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +      + +L+N L +     EA  + +E        D  T+ +LI G  + G +
Sbjct: 384 QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM 443

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF    +M     +P++VTY  L  GLC+  +V   +ELL E+  K     +V TY S
Sbjct: 444 VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG-LELNVYTYNS 502

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK G +++A  I  EM + G +    T+  LID   K G    A  M + ML  G
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P + T++ L++G+C +G++  G KL + M  KN+ PNV T+  L+   C +  +    
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +   ++ P    YN +I G CKA N+ EA     EM EK  +    +++ LI   
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL 682

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             K +  EA   F+KM   G
Sbjct: 683 NKKKKFSEARVFFDKMRNEG 702



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 17/345 (4%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            K  + V++ + + GL   V VV   +  DG+     M+E F       G+         
Sbjct: 408 LKEADRVLQEMVDKGL--DVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGR--------- 456

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +  P  VT     Y +L + L KQ +   A  +  E      + + +T+N LI GL + G
Sbjct: 457 RVAPNVVT-----YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFG 511

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +++A     +M + G   D+ TY TLI  LC+  E  R H +L+E+  K    P + TY
Sbjct: 512 NLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG-IKPSIATY 570

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +++G+C  G+++    +   M    ++P+ VT+N L+  +    NM S   + + M S
Sbjct: 571 NVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHS 630

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               P+  T++ LI G+C+   + + L    EM  K L     +++ LI  L K+ + ++
Sbjct: 631 QEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSE 690

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           AR F  +++   L  +P +Y+  +D      N++    +  E+ E
Sbjct: 691 ARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/280 (20%), Positives = 102/280 (36%), Gaps = 36/280 (12%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L  +  TYN ++  LC+ G  +    +   M + GH  +       + +  ++G+ D
Sbjct: 490 NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  +L +     +  S   YN L+N        +    + +       +P+  T+N L+
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +       +K   E +  M S   +P+  TYN LI                         
Sbjct: 610 KQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI------------------------- 644

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
                       G+CK   M +A   + EM   G++ +A +++ LI    K      A  
Sbjct: 645 -----------KGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARV 693

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
             ++M + G   +   +S  +D       L   + LCDE+
Sbjct: 694 FFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDEL 733


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 199/408 (48%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++ +L +  L    + +   M+S G  PN       V    R G    A  ++   
Sbjct: 250 SYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIM 309

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + + YN L+N        DEA  +  E  ++   PD  T+N LI G S+  + 
Sbjct: 310 TRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDS 369

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            + +    +M   G   + VTYN ++  +C+   +      L +++ ++  SPD VTY +
Sbjct: 370 SEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKME-ENGLSPDCVTYNT 428

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YCK GKM KA  + +EM S G+K    T N ++        +  A  +       G
Sbjct: 429 LIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRG 488

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y+ D V++  LI GY ++ + ++ L L DEMK + + P+  T+  +I  LC+  +++ A 
Sbjct: 489 YILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAI 548

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++  N LVP    YN +I GFC  GNV++A     EM E   KPD  T  IL+ G 
Sbjct: 549 DKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGL 608

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +G + +A+ +FN ++  G   D +T N++IS L K G    A+ ++
Sbjct: 609 CREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLL 656



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 219/473 (46%), Gaps = 44/473 (9%)

Query: 132 RLDNPKLGLK-FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV----QVVFDYMRSDG 186
           ++D P L  + F +  R+N   N    T N +M SL       S+    QV+ D ++  G
Sbjct: 152 QMDQPHLATQIFNKMKRLNYRPN--LLTCNTLMNSLVRYPSSSSILLARQVLKDSIKL-G 208

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
            +PN+      +       K   A   +++         T  YN++L+AL+K+    EA 
Sbjct: 209 VVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEAR 268

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +       P+  T+N+L+ G  R+G +K+A +    M      P + TYN L++G 
Sbjct: 269 DLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGF 328

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C   ++     +  E++ K    PDVVTY ++I G  +     +   +  EM+  G+K +
Sbjct: 329 CNDGKIDEAFRIRDEME-KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCN 387

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           AVT+N+++    K GNM  A    ++M   G  PD VT+++LI  YC+ G++ +  ++ D
Sbjct: 388 AVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMD 447

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFL-------------------------- 460
           EM  K L  + +T   +++ LC E +L++A   L                          
Sbjct: 448 EMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDE 507

Query: 461 ---------KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
                     ++K   ++P    YN VI G C++  VD+A   + EM E    PD+ T+ 
Sbjct: 508 KGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN 567

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           I+I G C++G + +A    N+M+     PD  T N L+  L + GM  +A ++
Sbjct: 568 IIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKL 620



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 186/359 (51%), Gaps = 9/359 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADE---AVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           +RP  +T      N+L+N+LV+  ++     A  + K+  +L   P+T +FNILI G   
Sbjct: 171 YRPNLLTC-----NTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCL 225

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             +VK A ++   M  FGC PD V+YNT++  L +   +    +LL ++K K   SP+  
Sbjct: 226 ESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG-LSPNKH 284

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY  ++ GYC+LG + +AT +   M    + P+  T+N+L++GF   G +  A  +R+ M
Sbjct: 285 TYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEM 344

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                LPDVVT+++LIDG  +    ++   L +EM  K +  N  T+ I++  +CK+  +
Sbjct: 345 EKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNM 404

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A   L +++ N L P    YN +I  +CKAG + +A  ++ EM  K  K D  T   +
Sbjct: 405 TEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTI 464

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +   C++ ++ EA ++     + G   D+++   LI    K    + A  +     E Q
Sbjct: 465 LHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQ 523



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 175/352 (49%), Gaps = 5/352 (1%)

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           SLL + +  +   E   +     R   +P     +  I    ++ +   A + F  M   
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL 169

Query: 291 GCSPDIVTYNTLISGLCRV---NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              P+++T NTL++ L R    + +    ++LK+   K    P+  ++  +I GYC   K
Sbjct: 170 NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKD-SIKLGVVPNTNSFNILIYGYCLESK 228

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +  A    N+M+  G  P  V++N ++D   K   +  A  +   M S G  P+  T++ 
Sbjct: 229 VKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNM 288

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+ GYCR G L +  K+ + M   NL P V+T+ +L+N  C + ++++A R   +++  +
Sbjct: 289 LVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMN 348

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           ++P    YN +IDG  +  +  E   ++ EM++K  K + VT+ I++   C KG M EA 
Sbjct: 349 VLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEAT 408

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           +  +KM   G +PD +T N+LI    K G   +AFR+M   +  + L++ +W
Sbjct: 409 TTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT-SKGLKIDTW 459



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 162/378 (42%), Gaps = 36/378 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C  G  D    + D M     LP+       +  C +         L+ + 
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN +L  + K+ N  EA     +       PD  T+N LI    + G++
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEV--------ARGHELLKEVKF-- 324
            KAF    +M S G   D  T NT++  LC   +++E          RG+ +L EV +  
Sbjct: 440 GKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGY-ILDEVSYGI 498

Query: 325 ----------------------KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                                 + +  P  +TY SVI G C+  K+D+A    NEM   G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P   T+N++I GF   GN+  A      M+   + PDV T + L+ G CR G L + L
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL + +  K    +V T+  +I++LCKE +  +A   L +++   L P  + Y  +I   
Sbjct: 619 KLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678

Query: 483 CKAGNVDEANVIVAEMEE 500
             AG + EA     +M E
Sbjct: 679 TDAGRIKEAEEFTLKMVE 696


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 205/436 (47%), Gaps = 28/436 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+NL++R+LC+    D+ + +FD M   G  PN       V    +AG  D    LL+  
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  +YN+++++  ++   D++  M ++       PD  TFN  I  L + G+V
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268

Query: 278 KKAFEFFYDMG---SFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             A   F DM      G   P+ +TYN ++ G C+V  +     L + ++   + +  + 
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS-LQ 327

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y   + G  + GK  +A  +  +M   GI PS  ++N+L+DG  K+G +  A+ +   M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  PD VT+  L+ GYC  G+++    L  EM   N  PN YT  IL+++L K  R+
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-------------- 499
           ++A   L+++            N ++DG C +G +D+A  IV  M               
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507

Query: 500 ---------EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
                    E  C PD +T++ L+ G C  GR  EA ++F +M+     PD +  N  I 
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567

Query: 551 CLLKGGMPNEAFRIMQ 566
              K G  + AFR+++
Sbjct: 568 HFCKQGKISSAFRVLK 583



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 219/473 (46%), Gaps = 65/473 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++R  C+ GL D    + + M S G LPN  +    VSS  R G+ D ++ ++ + 
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK-----EYFRLYSQPDTWTFNILIQGLS 272
           R   +      +NS ++AL K+    +A  +F      EY  L  +P++ T+N++++G  
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL-PRPNSITYNLMLKGFC 302

Query: 273 RIGEVKKAFEFFY------DMGSF-----------------------------GCSPDIV 297
           ++G ++ A   F       D+ S                              G  P I 
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           +YN L+ GLC++  ++    ++  +K ++   PD VTY  ++ GYC +GK+D A  +  E
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMK-RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M      P+A T N+L+    K+G +  AE +  +M   GY  D VT + ++DG C +G+
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481

Query: 418 LNQGLKLC-----------------------DEMKGKNLSPNVYTFTILINALCKENRLN 454
           L++ +++                        D +   N  P++ T++ L+N LCK  R  
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A+    ++    L P    YN  I  FCK G +  A  ++ +ME+K C     T+  LI
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +G  +K ++ E   + ++M   G +P+  T N+ I  L +G    +A  ++  
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 194/382 (50%), Gaps = 5/382 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+  +    + SCI+  + +    L        +   T+ +N L+ AL   +  D A  +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F E      +P+ +TF IL++G  + G   K  E    M SFG  P+ V YNT++S  CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN---SCGI-K 364
                   +++++++ +    PD+VT+ S IS  CK GK+  A+ I+++M      G+ +
Sbjct: 230 EGRNDDSEKMVEKMR-EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+++T+N+++ GF KVG +  A+ + E +     L  + +++  + G  R+G+  +   +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             +M  K + P++Y++ IL++ LCK   L+DA+  +  +K N + P    Y  ++ G+C 
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G VD A  ++ EM    C P+  T  IL+      GR+ EA  +  KM   G   D +T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468

Query: 545 VNSLISCLLKGGMPNEAFRIMQ 566
            N ++  L   G  ++A  I++
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVK 490



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 221/455 (48%), Gaps = 17/455 (3%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNL-----VMRSLCEMGLHDSVQVVFDYMR 183
           ++K  +NP+L  +   F R+  S +      +L     + R L    +H+ +Q + + + 
Sbjct: 9   LLKNTNNPRLAWRI--FKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLIL 66

Query: 184 SDGHLPNSPMIEFF--VSSCIRAGKCDAA--KGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           S   +  + +      VS   ++   D A  +  L + R  E   S ++YN LL + +K+
Sbjct: 67  SSS-IQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKE 125

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
              +   +++K+       P T+TFN+LI+ L     V  A E F +M   GC P+  T+
Sbjct: 126 RRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTF 185

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
             L+ G C+     +G ELL  ++      P+ V Y +++S +C+ G+ D +  +  +M 
Sbjct: 186 GILVRGYCKAGLTDKGLELLNAMESFGVL-PNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL----PDVVTFSSLIDGYCRN 415
             G+ P  VTFN  I    K G ++ A  +   M    YL    P+ +T++ ++ G+C+ 
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G L     L + ++  +   ++ ++ I +  L +  +  +A   LKQ+    + P  + Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N ++DG CK G + +A  IV  M+     PD VT+  L+ G+C  G++  A S+  +M+R
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             C P+  T N L+  L K G  +EA  ++++ +E
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 196/449 (43%), Gaps = 30/449 (6%)

Query: 141 KFLEFSRV-----NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KF+E   V     +  +  S  +YN++M  LC++G+    + +   M+ +G  P++    
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG 400

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +      GK DAAK LL +        + +  N LL++L K     EA  + ++    
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM--------GSFG---------------C 292
               DT T NI++ GL   GE+ KA E    M        G+ G               C
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PD++TY+TL++GLC+    A    L  E+    +  PD V Y   I  +CK GK+  A 
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEM-MGEKLQPDSVAYNIFIHHFCKQGKISSAF 579

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +  +M   G   S  T+N LI G G    +     + + M   G  P++ T+++ I   
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C   ++     L DEM  KN++PNV++F  LI A CK    + A+    +   +    K 
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKE 698

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            +Y+ + +    AG + +A  ++  + ++  +     +  L+   C K  +  A  I +K
Sbjct: 699 GLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           M+  G   D   +  +I  L K G   EA
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEA 787



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 198/454 (43%), Gaps = 58/454 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL+++  C++GL +  + +F+ +R +  L +      ++   +R GK   A+ +L Q 
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 218 RPGEVTMSTFMYNSLLNALVKQN-----------------------------------NA 242
               +  S + YN L++ L K                                       
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D A  + +E  R    P+ +T NIL+  L ++G + +A E    M   G   D VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFS----------------------PDVVTYTSVIS 340
           + GLC   E+ +  E++K ++     +                      PD++TY+++++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G CK G+  +A  ++ EM    ++P +V +N+ I  F K G + SA  + + M   G   
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
            + T++SLI G     Q+ +   L DEMK K +SPN+ T+   I  LC+  ++ DA   L
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++   ++ P  F +  +I+ FCK  + D A  +  E     C   +  ++++       
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAA 711

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           G++++A  +   +L  G          L+  L K
Sbjct: 712 GQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 172/387 (44%), Gaps = 52/387 (13%)

Query: 228 MYNSLLNALVKQ-NNADEAVYMFKEYFRLYSQPDTWTFNILIQG---LSRIGEVKKAFEF 283
           M  SL+ AL+K  NN   A  +FK   R++S P   +  I +     ++RI    K  E 
Sbjct: 1   MEQSLVKALLKNTNNPRLAWRIFK---RIFSSPSEESHGISLDATPTIARILVRAKMHEE 57

Query: 284 FYDMGSFGCSPDIVTYN-----TLISGLCRVNEVARGHELLKEVKFK-SEFSPDVVTYTS 337
             ++ +   S  I         +++S   + N + +     + V+ +  E  P V  Y  
Sbjct: 58  IQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNL 117

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN-------------------------- 371
           ++    K  +++  + +Y +M  CGI P   TFN                          
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177

Query: 372 ---------VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                    +L+ G+ K G       +   M SFG LP+ V +++++  +CR G+ +   
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL--VPKP--FMYNPV 478
           K+ ++M+ + L P++ TF   I+ALCKE ++ DA R    ++ ++   +P+P    YN +
Sbjct: 238 KMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           + GFCK G +++A  +   + E        ++ I + G    G+ +EA ++  +M   G 
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIM 565
            P   + N L+  L K GM ++A  I+
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIV 384



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 73/145 (50%)

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           ++P  YTF +LI ALC  + ++ AR    ++      P  F +  ++ G+CKAG  D+  
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++  ME     P+KV +  ++   C +GR  ++  +  KM   G  PD +T NS IS L
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262

Query: 553 LKGGMPNEAFRIMQRASEDQNLQLP 577
            K G   +A RI      D+ L LP
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLP 287



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 105/279 (37%), Gaps = 33/279 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+ G     + +F  M  +   P+S     F+    + GK  +A  +L   
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YNSL+  L  +N   E   +  E       P+  T+N  IQ L    +V
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV---------------------------- 309
           + A     +M     +P++ ++  LI   C+V                            
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMF 705

Query: 310 NEVARGHELLK-----EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           NE+    +LLK     E      F      Y  ++   CK  +++ A+GI ++M   G  
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG 765

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
                   +IDG GK+GN   A    ++M+    + +V 
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVA 804


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 193/375 (51%), Gaps = 20/375 (5%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T   +++ LC  G +H+++    D++ + G   N       ++   + G+  AA  +L +
Sbjct: 120 TLTTLIKGLCLNGKVHEALHF-HDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRK 178

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +  MY++++++L K+    EA  ++ +       PD  TF+ LI G   +G+
Sbjct: 179 IDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQ 238

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR-----------------VNEVARGHELL 319
            K+AF  F++M     +PD+ T+N L+  LC+                 VN+V +   + 
Sbjct: 239 FKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVF 298

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
             +  K   +PDV +YT +I   CK+  +D+A  ++NEM   GI P  VT++ LIDG  K
Sbjct: 299 NIIG-KRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCK 357

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              +  A  + ++M + G   DV+T++S +   C+N Q+++ + L  ++K + + PN+ T
Sbjct: 358 SERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINT 417

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + ILI+ LCKE R  +A+   + L         + YN +I+G C  G  DEA  ++ +ME
Sbjct: 418 YNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKME 477

Query: 500 EKRCKPDKVTFTILI 514
           +  C PD VT+  +I
Sbjct: 478 DNGCTPDVVTYETII 492



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 222/490 (45%), Gaps = 93/490 (18%)

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCD--AAKGLLSQFRPGEVT 223
            + +HD++   +  +R +   P+  +IEF   + S +++   +   A  L  + +   +T
Sbjct: 24  HVDVHDAISSFYRMLRMN---PSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAIT 80

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
            S   +N+++N        D A  +  +  ++   PDT T   LI+GL   G+V +A  F
Sbjct: 81  PSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHF 140

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK------------------ 325
              + + G   + V+Y  LI+GLC++ E     ++L+++  K                  
Sbjct: 141 HDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCK 200

Query: 326 ----------------SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
                            + SPDVVT++++I G+C +G+  +A G+++EM    I P   T
Sbjct: 201 EKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCT 260

Query: 370 FNVLIDGFGKVGNM-----VSAEYMRE--------------------------------- 391
           FN+L+D   K G+      V A  M+E                                 
Sbjct: 261 FNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320

Query: 392 --------------RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
                          M   G  PD VT+SSLIDG C++ +++   +L D+M  +    +V
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADV 380

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+T  ++ALCK ++++ A   +K++K   + P    YN +IDG CK G  + A VI  +
Sbjct: 381 ITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQD 440

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           +  K  K    T+ I+I G C++G   EA+++  KM   GC PD +T  ++I  L K   
Sbjct: 441 LLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDE 500

Query: 558 PNEAFRIMQR 567
            ++A ++++ 
Sbjct: 501 NHKAEKLLRE 510



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 2/247 (0%)

Query: 329 SPDVVTYTSVISGYCKLGKMDK--ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           SP ++ +  ++    K    +   A  +Y+ +    I PS VTFN +I+ +  +G M  A
Sbjct: 43  SPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFA 102

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +  ++L  GY PD +T ++LI G C NG++++ L   D +  +    N  ++ ILIN 
Sbjct: 103 FSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILING 162

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK      A + L+++    +     MY+ +ID  CK   V EA  + ++M  K+  PD
Sbjct: 163 LCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPD 222

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            VTF+ LI G CM G+  EA  +F++M+     PD  T N L+  L K G   E   ++ 
Sbjct: 223 VVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLA 282

Query: 567 RASEDQN 573
              ++ N
Sbjct: 283 VMMKEVN 289


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 202/375 (53%), Gaps = 5/375 (1%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           +++  +S     G  D A   L++ R   V  +T   N +L  L ++ +++ A  +F++ 
Sbjct: 130 VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQL 189

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
                 P+ +TFNI+I  L + G++ +A      M + GCSPD+VTYN+LI G  +  E+
Sbjct: 190 ----PAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGEL 245

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               +L+ E++      PDVVTY ++++ +CK G+M++A   + EM   G+  + VTF+ 
Sbjct: 246 EEVEKLVGEMR-GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFST 304

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
            +D F K G +  A  +  +M   G  P+ VT++ L+DG C+ G+L+  L L +EM  + 
Sbjct: 305 FVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQG 364

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  NV T+T+L++ LCKE ++ +A    + ++   +     +Y  +I G     N + A 
Sbjct: 365 VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERAL 424

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +++EM++K  + D   +  LI G C   ++ EA S+ NKM   G  P+++   +++   
Sbjct: 425 SLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDAC 484

Query: 553 LKGGMPNEAFRIMQR 567
            K    +EA  ++Q+
Sbjct: 485 FKARKESEAIALLQK 499



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 200/418 (47%), Gaps = 12/418 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  +     F  M+ +G + N      FV +  + G    A  L +Q 
Sbjct: 266 TYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQM 325

Query: 218 R-----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           R     P EVT     Y  L++   K    D+A+ +  E  +     +  T+ +L+ GL 
Sbjct: 326 RMKGMKPNEVT-----YTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLC 380

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G+V +A + F  M   G   + + Y TLI G        R   LL E+K K     DV
Sbjct: 381 KEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKG-MELDV 439

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             Y ++I G C L K+D+A  + N+M+ CG+KP+ V +  ++D   K      A  + ++
Sbjct: 440 SLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQK 499

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G+ P++VT+ +L+DG C+ G +++ +   ++M    L PNV  +T L++ LCK  R
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L+ A   L ++    +     +   ++DG  K GN+ +A  + A+M     + D   +T 
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTC 619

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            + G C    + EA  + ++M+  G  PD +  N LI+   K G   EA  I+Q   E
Sbjct: 620 FVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEA-AILQNEME 676



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 186/373 (49%), Gaps = 5/373 (1%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           MI+F      + G    A+ LL++ +    +     YNSL++   K    +E   +  E 
Sbjct: 200 MIDFLC----KEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
                +PD  T+N L+    + G +++A+ +F +M   G   ++VT++T +   C+   V
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMV 315

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               +L  +++ K    P+ VTYT ++ G CK G++D A  + NEM   G+  + VT+ V
Sbjct: 316 REAMKLFAQMRMKG-MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTV 374

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L+DG  K G +  AE +   M   G   + + +++LI G+       + L L  EMK K 
Sbjct: 375 LVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKG 434

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  +V  +  LI  LC   +L++A+  L ++    L P   +Y  ++D   KA    EA 
Sbjct: 435 MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAI 494

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            ++ +M +   +P+ VT+  L+ G C  G + EAIS FNKM+ +G  P+     +L+  L
Sbjct: 495 ALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554

Query: 553 LKGGMPNEAFRIM 565
            K G  ++A  ++
Sbjct: 555 CKNGRLDKAVLLL 567



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 11/243 (4%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL---- 214
           Y  ++  LC +   D  + + + M   G  PN+ +    + +C +A K   A  LL    
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501

Query: 215 -SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
            S FRP  VT     Y +L++ L K  + DEA+  F +   L  +P+   +  L+ GL +
Sbjct: 502 DSGFRPNIVT-----YCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCK 556

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G + KA     +M   G S D V   +L+ G  +   +     L K     S    D+ 
Sbjct: 557 NGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFAL-KAKMINSGLQLDLY 615

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            YT  + G+C L  + +A  + +EM   GI P AV +N LI+   K+GNM  A  ++  M
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675

Query: 394 LSF 396
            S 
Sbjct: 676 ESL 678


>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Brachypodium distachyon]
          Length = 746

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 203/407 (49%), Gaps = 11/407 (2%)

Query: 152 LNHSFKTYNLVMRSLC--------EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           L  +  ++NL+++ +C        ++ L  +++VV   + +   +P+       VS+   
Sbjct: 267 LAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALAD 326

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG+ D A  L+ +     V  +   +N +L A+++  +   A  +F         P   T
Sbjct: 327 AGRVDDAVALVHEMVVDGVVAAE-AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAAT 385

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N+L+ GL   G  K A      M      P ++TY  ++ GL R   +    ++++E++
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMR 445

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    P+   ++ VI+G+CKLG++D+A+ +++ M + GIKP+ V ++ +IDG  + G M
Sbjct: 446 SKG-LVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKM 504

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             AE +   M+    +P+++T+SS++ GY + G  +Q L   ++M     +PN  T+++L
Sbjct: 505 TEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVL 564

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK-R 502
           IN LC   R  DA    K +     VP    Y  +I GFC +G VD    +  +M  +  
Sbjct: 565 INGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGD 624

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             PD + + +L+ G      +  A+ + N+ML   C PD +T N+ +
Sbjct: 625 THPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFL 671



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 164/330 (49%), Gaps = 3/330 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F Y+++++AL      D+AV +  E   +        FN ++  + R G+V  A + F  
Sbjct: 315 FTYSTVVSALADAGRVDDAVALVHEMV-VDGVVAAEAFNPVLGAMLRTGDVTGAAKLFSF 373

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   GC+P   TYN L+ GL           +++ ++ ++E  P V+TY +V+ G  + G
Sbjct: 374 MQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRME-RAEVVPGVMTYGAVVDGLVRCG 432

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           +++ A  +  EM S G+ P+   F+ +I GF K+G +  A  + + M++ G  P+VV +S
Sbjct: 433 RLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYS 492

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           ++IDG  R G++ +   L  EM      PN+ T++ ++    +    + A  F + +   
Sbjct: 493 AMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRI 552

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    Y+ +I+G C  G   +A ++   M  + C PD + +T +I G C+ G +   
Sbjct: 553 GCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAG 612

Query: 527 ISIFNKMLRIG-CAPDDITVNSLISCLLKG 555
           + +F  ML  G   PD I  N L+  LL+ 
Sbjct: 613 LRLFYDMLARGDTHPDVICYNVLLDGLLRA 642



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 167/333 (50%), Gaps = 22/333 (6%)

Query: 249 FKEYFRLYSQ--PDTWTFNILIQGLSRIGEVKKAFEFFYDMG---------SFGCSPDIV 297
           F    R +++  P   +FN+L++ +     V +  + + ++          ++   PD  
Sbjct: 257 FSHSLRRFTRLAPTLLSFNLLLKCVCS-SLVPRNHQLYLELALRVVHRSIPAWKLVPDKF 315

Query: 298 TYNTLISGLC---RVNE-VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           TY+T++S L    RV++ VA  HE++ +    +E       +  V+    + G +  A  
Sbjct: 316 TYSTVVSALADAGRVDDAVALVHEMVVDGVVAAE------AFNPVLGAMLRTGDVTGAAK 369

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +++ M   G  PSA T+NVL+ G    G   +A  +  RM     +P V+T+ +++DG  
Sbjct: 370 LFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLV 429

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           R G+L    K+ +EM+ K L PN + F+ +I   CK   ++ A R    +    + P   
Sbjct: 430 RCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVV 489

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           +Y+ +IDG  + G + EA ++  EM E +C P+ +T++ ++ G+   G   +A+S +  M
Sbjct: 490 LYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDM 549

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           LRIGC P+ +T + LI+ L   G   +A  + +
Sbjct: 550 LRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWK 582



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 148/306 (48%), Gaps = 2/306 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD +T++ ++  L+  G V  A    ++M   G       +N ++  + R  +V    +L
Sbjct: 312 PDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAAKL 370

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
              ++ K   +P   TY  ++ G    G+   A G+   M    + P  +T+  ++DG  
Sbjct: 371 FSFMQLKG-CAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLV 429

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G +  A  + E M S G +P+   FS +I G+C+ G++++  ++ D M    + PNV 
Sbjct: 430 RCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVV 489

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            ++ +I+ L +  ++ +A    +++     VP    Y+ ++ G+ + G+  +A     +M
Sbjct: 490 LYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDM 549

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
               C P+ VT+++LI G C  GR  +A+ ++  ML  GC PD I   S+I      GM 
Sbjct: 550 LRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMV 609

Query: 559 NEAFRI 564
           +   R+
Sbjct: 610 DAGLRL 615



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 150/315 (47%), Gaps = 21/315 (6%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  V+  L   G L D+ +V+ + MRS G +PN  +    ++   + G+ D A  +   
Sbjct: 420 TYGAVVDGLVRCGRLEDACKVI-EEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDT 478

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  +  +Y+++++ L +     EA  +F+E       P+  T++ +++G  +IG+
Sbjct: 479 MVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGD 538

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A  F+ DM   GC+P+ VTY+ LI+GLC V        + K +  +    PD + YT
Sbjct: 539 SSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCV-PDTIAYT 597

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           S+I G+C  G +D    ++ +M + G   P  + +NVL+DG  +  ++  A  +  +ML 
Sbjct: 598 SMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLD 657

Query: 396 FGYLPDVV---TFSSLIDGYCRNGQLNQGL--KLCDE------------MKGKNLSPNVY 438
               PD V   TF   I+   +  +  +GL  +LC+             M  K + P   
Sbjct: 658 QACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAA 717

Query: 439 TFTILINALCKENRL 453
              +++  +C+  R+
Sbjct: 718 VLEMVVRGVCRRKRV 732



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 9/143 (6%)

Query: 433 LSPNVYTFTILINALCKENRLNDARRFL--------KQLKWNDLVPKPFMYNPVIDGFCK 484
           L+P + +F +L+  +C      + + +L        + +    LVP  F Y+ V+     
Sbjct: 267 LAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALAD 326

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           AG VD+A  +V EM        +  F  ++      G +  A  +F+ M   GCAP   T
Sbjct: 327 AGRVDDAVALVHEMVVDGVVAAE-AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAAT 385

Query: 545 VNSLISCLLKGGMPNEAFRIMQR 567
            N L+  LL  G    A  +M+R
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRR 408


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 208/416 (50%), Gaps = 1/416 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S ++YN ++  L    + D ++ V+  M +D  +PN   +   V++  + G    A   +
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     ++  +F Y SL+    + N+ + A  +F        + +  ++  +I GL   
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +    F  M    C P + TY  +I  L   +    G +L  E++ +S   P+V T
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERS-CEPNVHT 356

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT ++   CK  K+D++  I NEM   G+ PS VT+N LI G+ + G + +A  +   M 
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLME 416

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S    P+  T++ LI G+ +   +++ + L  +M    L+P++ T+  LI+  CK    +
Sbjct: 417 SNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFD 476

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + L  LK N LVP  + Y+  ID  CK+  ++EA  +   ++EK  K ++V +T LI
Sbjct: 477 SAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALI 536

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            GHC  G++ EAIS+  +M    C P+  T NSLI  + K G   E   +++  S+
Sbjct: 537 DGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSK 592



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 192/395 (48%), Gaps = 1/395 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +TY +++ +L     +     +F+ MR     PN       V +  +  K D ++ +L
Sbjct: 318 TVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRIL 377

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++     +  S   YN+L+    ++   + A+ +         +P+  T+N LI G S+ 
Sbjct: 378 NEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKR 437

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             V KA      M     +P +VTYN+LI   C+       ++LL  +K ++   PD  T
Sbjct: 438 KHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLK-ENGLVPDQWT 496

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+  I   CK  +M++A  ++N +   GIK + V +  LIDG  K G +  A  + ERM 
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMH 556

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S   LP+  T++SLI G C+ G++ +GL + + M    + P V T+TILI  + +E   +
Sbjct: 557 SEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFD 616

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A R   Q+      P  + Y   I  +C +GNV EA  ++A M E    PD +T+T+LI
Sbjct: 617 HANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLI 676

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             +   G   +A ++  +ML  GC P     N+LI
Sbjct: 677 SAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 191/410 (46%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LCE G  D    +F  MR D   P        + +     +      L ++ 
Sbjct: 286 SYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM 345

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R      +   Y  +++A+ K+   DE+  +  E       P   T+N LI+G    G +
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E    M S  C P+  TYN LI G  +   V +   LL ++  +S+ +P +VTY S
Sbjct: 406 EAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM-LESKLTPSLVTYNS 464

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G  D A  + + +   G+ P   T++V ID   K   M  A  +   +   G
Sbjct: 465 LIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKG 524

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + V +++LIDG+C+ G++++ + L + M  ++  PN  T+  LI  +CKE ++ +  
Sbjct: 525 IKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGL 584

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++ +    + P    Y  +I+   + G+ D AN +  +M     KPD  T+T  I  +
Sbjct: 585 SMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTY 644

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C  G + EA  +  +M+  G  PD +T   LIS   + G+  +AF +++R
Sbjct: 645 CTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKR 694



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 190/356 (53%), Gaps = 18/356 (5%)

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR---IGEVKKAF-EFFYDMGSFG 291
            ++Q N D+    FK   R        ++N L+  L+R   I E+K+ + E   DM    
Sbjct: 162 FLRQMNRDDNDIKFKLSVR--------SYNELLMMLARFLMIDEMKRVYTEMLNDM---- 209

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P+I T NT+++   ++  +   +  + ++ F++  SPD  TYTS+I GYC+   ++ A
Sbjct: 210 IVPNIYTLNTMVNAYSKMGNIVEANLYVSKI-FQAGLSPDSFTYTSLILGYCRNNDVNSA 268

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++N M + G + + V++  +I G  + G +     + ++M      P V T++ +I  
Sbjct: 269 YKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHA 328

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
              N +  +G+ L +EM+ ++  PNV+T+T++++A+CKE +L+++RR L ++    LVP 
Sbjct: 329 LFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPS 388

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I G+C+ G ++ A  I+  ME   C+P++ T+  LI G   +  + +A+++ +
Sbjct: 389 VVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLS 448

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRT 587
           KML     P  +T NSLI    K G  + A++++    E+  L    W  +V + T
Sbjct: 449 KMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKEN-GLVPDQWTYSVFIDT 503



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 130/262 (49%), Gaps = 9/262 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  S  TYN ++   C+ G  DS   + D ++ +G +P+      F+ +  ++ + + A 
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC 514

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILI 268
            L +  +   +  +  MY +L++   K    DEA+ + +   R++S+   P++ T+N LI
Sbjct: 515 DLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLE---RMHSEDCLPNSSTYNSLI 571

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSE 327
            G+ + G+V++      +M   G  P + TY  LI  + R  +    + +  + V F  +
Sbjct: 572 YGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHK 631

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TYT+ I  YC  G + +A G+   M   G+ P ++T+ +LI  + ++G    A 
Sbjct: 632 --PDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAF 689

Query: 388 YMRERMLSFGYLPDVVTFSSLI 409
            + +RML  G  P    +++LI
Sbjct: 690 NVLKRMLDAGCDPSHPIWNNLI 711


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 4/381 (1%)

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           S G  P+  +    + +  R G+   A  +L         +  F YN+L+    +    D
Sbjct: 67  SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLD 126

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A  +      +   PD +T+  +I+GL   G V  A     DM   GC P +VTY  L+
Sbjct: 127 AARRLIAS---MPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLL 183

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             +C+ +       +L E++ K   +P++VTY  +I+G C+ G++D A  I N ++S G 
Sbjct: 184 EAVCKSSGFGEAMNVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGF 242

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P  V++  ++ G          + +   M+    +P+ VTF  L+  +CR G + + ++
Sbjct: 243 QPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQ 302

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +  +M     +PN     I+INA+CK+ R++DA  FL  +      P    Y  V+ G C
Sbjct: 303 VLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC 362

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           +AG  + A  ++ EM  K C P++VTF   I   C KG + +AI +   M   GC+   +
Sbjct: 363 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV 422

Query: 544 TVNSLISCLLKGGMPNEAFRI 564
           T N+L+      G  + A  +
Sbjct: 423 TYNALVHGFCVQGRVDSALEL 443



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 201/421 (47%), Gaps = 5/421 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++ ++C+         V D MR+ G  PN       ++   R G+ D AK +L
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 234

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++            Y ++L  L      D+   +F E       P+  TF++L++   R 
Sbjct: 235 NRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRG 294

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A +    M   GC+P+    N +I+ +C+   V   ++ L  +      +PD ++
Sbjct: 295 GMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG-CNPDTIS 353

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT+V+ G C+ G+ + A  +  EM      P+ VTFN  I    + G +  A  + E M 
Sbjct: 354 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 413

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            +G    +VT+++L+ G+C  G+++  L+L + +  +   PN  T+T L+  LC   RL+
Sbjct: 414 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLD 470

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L  +   D       +N ++  FC+ G V+EA  +V +M E  C P+ +TF  L+
Sbjct: 471 AAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 530

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G        EA+ + + ++  G + D IT +S++  L +     EA +++  A +D  +
Sbjct: 531 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH-AVQDMGM 589

Query: 575 Q 575
           +
Sbjct: 590 R 590



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 178/363 (49%), Gaps = 5/363 (1%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +AA+ + +    GE     ++   L+  L ++    +A  + +      +  D + +N L
Sbjct: 57  EAARLVETSSSRGEAP-DVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTL 115

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + G  R G +  A      + S    PD  TY  +I GLC    V     LL ++  +  
Sbjct: 116 VAGYCRYGRLDAARRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDM-LQRG 171

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P VVTYT ++   CK     +A  + +EM + G  P+ VT+NV+I+G  + G +  A+
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  R+ S+G+ PD+V++++++ G C   + +    L  EM  K   PN  TF +L+   
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+   +  A + L+Q+  +   P   + N VI+  CK G VD+A   +  M    C PD 
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 351

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +++T ++ G C  GR   A  +  +M+R  C P+++T N+ I  L + G+  +A ++++ 
Sbjct: 352 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 411

Query: 568 ASE 570
             E
Sbjct: 412 MPE 414



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 185/380 (48%), Gaps = 4/380 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++R  C  G+ +    V   M   G  PN+ +    +++  + G+ D A   L+  
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T  Y ++L  L +    + A  +  E  R    P+  TFN  I  L + G +
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLI 402

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M  +GCS  IVTYN L+ G C    V    EL   +  +    P+ +TYT+
Sbjct: 403 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE----PNTITYTT 458

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C   ++D A  +   M       +AVTFNVL+  F + G +  A  +  +M+  G
Sbjct: 459 LLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 518

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++TF++L+DG  ++    + L+L   +  K +S +  T++ +++ L +E+R  +A 
Sbjct: 519 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 578

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L  ++   + PK  MYN ++   CK    D+A    A M    C P++ T+ ILI G 
Sbjct: 579 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G + EA  + +++   G
Sbjct: 639 AHEGLLKEARYVLSELYAKG 658



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 195/411 (47%), Gaps = 10/411 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V++ LC     D V+V+F  M     +PN    +  V    R G  + A  +L Q 
Sbjct: 248 SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 307

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
                T +T + N ++NA+ KQ   D+A Y F     +Y   PDT ++  +++GL R G 
Sbjct: 308 SQHGCTPNTTLCNIVINAICKQGRVDDA-YDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 366

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF--SPDVVT 334
            + A E   +M    C P+ VT+NT I  LC+   +    + +K ++   E+  S  +VT
Sbjct: 367 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLI---EQAIKLIELMPEYGCSVGIVT 423

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +++ G+C  G++D A  ++N +     +P+ +T+  L+ G      + +A  +   M+
Sbjct: 424 YNALVHGFCVQGRVDSALELFNNLPC---EPNTITYTTLLTGLCHAERLDAAAELLAGMI 480

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 + VTF+ L+  +C+ G + + ++L ++M     +PN+ TF  L++ + K+    
Sbjct: 481 QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSE 540

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A   L  L    +      Y+ V+D   +    +EA  ++  +++   +P    +  ++
Sbjct: 541 EALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 600

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              C +    +AI  F  M+  GC P++ T   LI  L   G+  EA  ++
Sbjct: 601 FALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVL 651



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L +  +L +    +  +P+VY  T LI  LC+  R +DA R L+  + +      F YN 
Sbjct: 55  LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++ G+C+ G +D A  ++A M      PD  T+T +I G C +GR+ +A+++ + ML+ G
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C P  +T   L+  + K     EA  ++
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVL 199


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 211/443 (47%), Gaps = 39/443 (8%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T ++++  LCE   L D++  + D  +  G  P+   I   +S   + G  D A+     
Sbjct: 239 TTSILIHGLCEQSKLEDAISFLHDSNKVVG--PSIVSINTIMSKFCKVGLIDVARSXFCL 296

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +   +F YN LL+ L    + DEA+    +  +   +PD  T+N L +G   +G 
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGL 356

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A +    M   G +PD+VTY TLI G C++  +    +L +E      F  +V+ Y 
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQET-LSRGFKLNVIFYN 415

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM--- 393
            ++S  CK+G++++A  +++EM +  ++P  + +++LI G  K G +  A  + E+M   
Sbjct: 416 MLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLK 475

Query: 394 --------------------------------LSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
                                                + DVV ++ +IDGY R   + + 
Sbjct: 476 RKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           ++L  +M  + ++P+V TF  LIN  C+   L +AR+ L+ ++   LVP    Y  +++ 
Sbjct: 536 MQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA 595

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +C+ GN+ E    + EME     P  VT+T+LI G C + +M E++ +   M   G  PD
Sbjct: 596 YCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPD 655

Query: 542 DITVNSLISCLLKGGMPNEAFRI 564
            +T N++I C  KG    +A ++
Sbjct: 656 SVTYNTIIQCFCKGKEITKALQL 678



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 210/430 (48%), Gaps = 12/430 (2%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-----NSPMIEFFVSSCIRAGK 206
           L H   +YN+++  LC  G  D      D M   G  P     N+    F +   +   +
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
               K LL    P  VT     Y +L+    +  N +EA+ + +E      + +   +N+
Sbjct: 362 KVVQKMLLQGLNPDLVT-----YTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L+  L ++G +++A   F +M +    PD + Y+ LI GLC+   V R ++L ++++ K 
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKR 476

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           +F P      +V+ G  K G + +A   ++      +    V +N++IDG+ ++  +  A
Sbjct: 477 KF-PHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEA 535

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +  +M+  G  P VVTF++LI+G+CR G L +  K+ + ++ K L P+V T+T L+NA
Sbjct: 536 MQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNA 595

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            C+   + +   FL +++ N +VP    Y  +I G C+   + E+  ++  M  K   PD
Sbjct: 596 YCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPD 655

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            VT+  +I   C    + +A+ ++N ML   C P  +T   LI+ L   G   +  R M 
Sbjct: 656 SVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR-MV 714

Query: 567 RASEDQNLQL 576
            + ED+N+ L
Sbjct: 715 VSIEDRNITL 724



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 201/439 (45%), Gaps = 36/439 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN + +    +GL    + V   M   G  P+       +    + G  + A  L  + 
Sbjct: 343 TYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQET 402

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++   YN LL+ L K    +EA+ +F E   L  +PD   ++ILI GL + G V
Sbjct: 403 LSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFV 462

Query: 278 KKAFEFFYDM-----------------GSF------------------GCSPDIVTYNTL 302
           ++A++ +  M                 G F                      D+V YN +
Sbjct: 463 QRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIM 522

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G  R++ +A   +L  ++  +   +P VVT+ ++I+G+C+ G + +A  +   +   G
Sbjct: 523 IDGYVRLDGIAEAMQLYYKM-IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + PS VT+  L++ + +VGNM    +    M +   +P  VT++ LI G CR  ++++ L
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESL 641

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L + M  K L P+  T+  +I   CK   +  A +    +  ++  P    Y  +I+  
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G++ + + +V  +E++     K T+  +I  HC KG++ +A+  FN+ML  G     
Sbjct: 702 CIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISI 761

Query: 543 ITVNSLISCLLKGGMPNEA 561
              +++I+ L K G+  EA
Sbjct: 762 RDYSAVINRLCKRGLITEA 780



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 167/394 (42%), Gaps = 38/394 (9%)

Query: 151 SLNHSFKT----YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           +L+  FK     YN+++  LC++G  +    +FD M +    P+  +    +    + G 
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A  L  Q R        F   ++L  L K  N  EA   F  + R+    D   +NI
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNI 521

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK- 325
           +I G  R+  + +A + +Y M   G +P +VT+NTLI+G CR  ++    ++L+ ++ K 
Sbjct: 522 MIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKG 581

Query: 326 ---------------------------------SEFSPDVVTYTSVISGYCKLGKMDKAT 352
                                            +   P  VTYT +I G C+  KM ++ 
Sbjct: 582 LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESL 641

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +   M + G+ P +VT+N +I  F K   +  A  +   ML     P  VT+  LI+  
Sbjct: 642 QLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C  G L    ++   ++ +N++    T+  +I A C + +++ A  +  Q+     V   
Sbjct: 702 CIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISI 761

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
             Y+ VI+  CK G + EA      M  +   PD
Sbjct: 762 RDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 157/339 (46%), Gaps = 14/339 (4%)

Query: 234 NALVKQNNADEAVY--MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           N +V Q     ++   +  E FR +   +   +++L    SR   +  A      M    
Sbjct: 142 NLIVDQGLGSASIICDLLLEKFRNWD-SNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLN 200

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEV--KFKSEFSPDVVTYTSV-ISGYCKLGKM 348
               + TYN+L+  +       R  +++ +V  + K   +P     TS+ I G C+  K+
Sbjct: 201 FQASVPTYNSLLHNM-------RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKL 253

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A    ++ N   + PS V+ N ++  F KVG +  A      M+  G L D  +++ L
Sbjct: 254 EDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNIL 312

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           + G C  G +++ L   D+M+   + P+V T+  L         ++ AR+ ++++    L
Sbjct: 313 LHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGL 372

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  +I G C+ GN++EA  +  E   +  K + + + +L+   C  GR+ EA++
Sbjct: 373 NPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALT 432

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +F++M  +   PD I  + LI  L K G    A+++ ++
Sbjct: 433 LFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQ 471



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 127/285 (44%), Gaps = 2/285 (0%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           RLD     ++ L +  +   +  S  T+N ++   C  G     + + + +R  G +P+ 
Sbjct: 528 RLDGIAEAMQ-LYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV 586

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 +++    G        L +     V  +   Y  L+  L +QN   E++ + + 
Sbjct: 587 VTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEY 646

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
            +     PD+ T+N +IQ   +  E+ KA + +  M    C P  VTY  LI+ LC   +
Sbjct: 647 MYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGD 706

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           +     ++  ++ ++  +    TY ++I  +C  G++ KA G +N+M + G   S   ++
Sbjct: 707 LKDVDRMVVSIEDRN-ITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYS 765

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            +I+   K G +  A+Y    MLS G  PD     ++++ + + G
Sbjct: 766 AVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQG 810



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 130/303 (42%), Gaps = 3/303 (0%)

Query: 159 YNLVMRSLCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           YN+++     + G+ +++Q+ +  M   G  P+       ++   R G    A+ +L   
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYK-MIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  S   Y +L+NA  +  N  E  +   E       P   T+ +LI+GL R  ++
Sbjct: 578 RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKM 637

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            ++ +    M + G  PD VTYNT+I   C+  E+ +  +L   +   +   P  VTY  
Sbjct: 638 HESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN-CDPTQVTYKV 696

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C  G +     +   +    I     T+  +I      G +  A     +ML+ G
Sbjct: 697 LINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKG 756

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++  +  +S++I+  C+ G + +       M  + ++P+      ++NA  ++   +   
Sbjct: 757 FVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVF 816

Query: 458 RFL 460
            FL
Sbjct: 817 EFL 819


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 204/405 (50%), Gaps = 4/405 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA-GK 206
           V+  +  +  TYNL+ ++LC+ G  +  + + D M   G + +  +    V+  +R  G+
Sbjct: 343 VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGR 402

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            D    L+ +     +  +  +  + +  L K    +EA  ++ +        +  T N 
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI GL +   +K+A +    M + G   D +TYN +I G C+ +++    +L  ++  K 
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM-IKR 521

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
            F PD+ T+   +  YC LGK+++   + ++M S G+KP  VT+  +IDG+ K  +M  A
Sbjct: 522 GFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKA 581

Query: 387 -EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
            EY+ E M + G  P+ V +++LI GY RNG ++  + + D MK   + P   T+  L+ 
Sbjct: 582 NEYLTELMKN-GLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMY 640

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            +C    + + +    Q    D+      Y  +I GFCK G +DEA +   EM  +   P
Sbjct: 641 WMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPP 700

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           +K+T+T L+  +   G   EA  +F++M+ +G  PD ++ N+LIS
Sbjct: 701 NKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLIS 745



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 204/447 (45%), Gaps = 6/447 (1%)

Query: 126 SLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDY---M 182
           SL   +RL +  L    L  +   ++ +H   T +L++R+        S+    D    +
Sbjct: 107 SLPSARRLVSRLLRFNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFLEL 166

Query: 183 RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE-VTMSTFMYNSLLNALVKQNN 241
            + G  P+       V +    G+ D A+ +  + R G+ V      Y +++ AL +   
Sbjct: 167 SARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGE 226

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
            D A  M  E  R   QP   T+N+L+  L + G V++AF     M      P IVT+  
Sbjct: 227 IDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGI 286

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LISGL R  +      +L+E++     +P+ V Y  +I  +C+ G   +A  +++EM S 
Sbjct: 287 LISGLARGQQFGEVGAVLQEMQGFG-ITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSK 345

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR-NGQLNQ 420
           GIK + VT+N++     K G M  AE + + ML  G +     F+S++  + R  G+L+ 
Sbjct: 346 GIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDL 405

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L+L  EM  + L PN    T  I  LCK  +  +A     Q+    L       N +I 
Sbjct: 406 VLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIH 465

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G C+  N+ EA  ++  M     + D++T+ I+I G C   +M EAI + + M++ G  P
Sbjct: 466 GLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKP 525

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           D  T N  +      G   E   ++ +
Sbjct: 526 DLFTFNIFLHTYCNLGKVEEILHLLDQ 552



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 198/462 (42%), Gaps = 42/462 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVS 199
           FLE S    S   S KT ++++ +L   G  D  + VF  MR DG    P+       + 
Sbjct: 163 FLELSARGAS--PSIKTCSILVEALGCGGQLDVARKVFGEMR-DGKTVAPDVHTYTAMIK 219

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           +  RAG+ DAA  +L++ R   +  +   YN L++AL K    +EA  +         +P
Sbjct: 220 ALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRP 279

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
              TF ILI GL+R  +  +      +M  FG +P+ V YN +I   CR    +   +L 
Sbjct: 280 SIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLF 339

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG----------------- 362
            E+  K      VVTY  +    CK G+M+ A  I +EM   G                 
Sbjct: 340 DEMVSKG-IKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLR 398

Query: 363 -------------------IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
                              +KP+       I    K G    A  +  ++L  G   +V 
Sbjct: 399 GTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVA 458

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T ++LI G C+   + +  K+   M    +  +  T+ I+I   CK +++++A +    +
Sbjct: 459 TSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM 518

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                 P  F +N  +  +C  G V+E   ++ +M+ +  KPD VT+  +I G+C    M
Sbjct: 519 IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDM 578

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +A     ++++ G  P+ +  N+LI    + G  ++A  I+
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL 620



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 170/372 (45%), Gaps = 20/372 (5%)

Query: 90  SNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVN 149
           + E WF +V+   L  +   S+     LC+  +   + +V+K + N  +     E  R+ 
Sbjct: 441 AAEIWF-QVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV-----ELDRI- 493

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
                   TYN++++  C+    D    + D M   G  P+      F+ +    GK + 
Sbjct: 494 --------TYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEE 545

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
              LL Q +   +      Y ++++   K  +  +A     E  +   +P+   +N LI 
Sbjct: 546 ILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIG 605

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  R G +  A      M   G  P  VTYN+L+  +C    V     +  +   K +  
Sbjct: 606 GYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVK-DIE 664

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
             V+ YT +I G+CK+GK+D+A   + EM+S GI P+ +T+  L+  + K GN   A  +
Sbjct: 665 LGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKL 724

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL-- 447
            + M+S G +PD V++++LI G+C    L++ ++   EM  + L  +  ++   ++ +  
Sbjct: 725 FDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITT 784

Query: 448 --CKENRLNDAR 457
             C++  +++A 
Sbjct: 785 PWCQKEAVSNAE 796


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 208/447 (46%), Gaps = 37/447 (8%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S V L L+ +  T+NL++ + C  G           M+  G  P++      +++  R G
Sbjct: 194 SIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKG 253

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
               A+ LL++ +   V  +   YN+L++A  +     +A  + +       +PD WT+N
Sbjct: 254 MLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYN 313

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCS-PDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +L  GL + G+V +AF    +M   G   PD+VTYNTL     +    +    LL+E++ 
Sbjct: 314 VLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMRE 373

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K      +VT+  VI G CK G+++ A G  N+M   G+ P  +T+N LI    K GN+ 
Sbjct: 374 KG-VKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIA 432

Query: 385 SAEYMRERML-----------------------------------SFGYLPDVVTFSSLI 409
            A  + + M+                                     G++PD V++ +++
Sbjct: 433 KAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVM 492

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
             Y +       L+L DEM  K L+P++ T+  LI  L +  RL +A   L +L    LV
Sbjct: 493 AAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLV 552

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN +I  +CK G+++ A     +M E   KPD VT   L+ G C+ G++ +A+ +
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKL 612

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGG 556
           F   +  G   D IT N+LI  + K G
Sbjct: 613 FESWVEKGKKVDVITYNTLIQTMCKDG 639



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 200/449 (44%), Gaps = 4/449 (0%)

Query: 126 SLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD 185
           +L    RL  P L  + L   R  + +  S +  N V+ +L       S Q   D  RS 
Sbjct: 137 ALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALAR-SPSTSPQASLDAFRSI 195

Query: 186 GHL---PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
             L   PN       V +    G    A   LS  +   ++     YN+LLNA  ++   
Sbjct: 196 VALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGML 255

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            EA  +     +    P   T+N L+   +R+G +K+A +    M + G  PD+ TYN L
Sbjct: 256 GEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVL 315

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
            +GLC+  +V     L  E++      PDVVTY ++     K      A  +  EM   G
Sbjct: 316 AAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKG 375

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +K + VT N++I G  K G +  A     +M   G  PDV+T+++LI  +C+ G + +  
Sbjct: 376 VKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAY 435

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L DEM  + L  + +T   ++  LCKE R  +A+  L+       +P    Y  V+  +
Sbjct: 436 TLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAY 495

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K  N + A  +  EM EK+  P   T+  LI G    GR+ EAI   N+++  G  PDD
Sbjct: 496 FKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDD 555

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
            T N +I    K G    AF+   +  E+
Sbjct: 556 TTYNIIIHAYCKEGDLENAFQFHNKMVEN 584



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 2/418 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +   +G       V + M ++G  P+        +   +AGK D A  L  + 
Sbjct: 276 TYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM 335

Query: 218 -RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G +      YN+L +A  K   + +A+ + +E      +    T NI+I+GL + GE
Sbjct: 336 ERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGE 395

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++ A      M   G +PD++TYNTLI   C+   +A+ + L+ E+  +     D  T  
Sbjct: 396 LEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM-VRRGLKLDTFTLN 454

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +V+   CK  + ++A G+       G  P  V++  ++  + K  N   A  + + M+  
Sbjct: 455 TVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEK 514

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P + T+++LI G  R G+L + +   +E+  K L P+  T+ I+I+A CKE  L +A
Sbjct: 515 KLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENA 574

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +F  ++  N   P     N +++G C  G +D+A  +     EK  K D +T+  LI  
Sbjct: 575 FQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQT 634

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            C  G +  A+  F  M   G  PD  T N ++S L + G   EA  ++ + +E   L
Sbjct: 635 MCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTL 692



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 204/421 (48%), Gaps = 12/421 (2%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L+ LE  R    +  +  T+N+V++ LC+ G  +      + M  DG  P+       +
Sbjct: 364 ALRLLEEMREK-GVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLI 422

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
            +  +AG    A  L+ +     + + TF  N++L  L K+   +EA  + +   +    
Sbjct: 423 HAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  ++  ++    +    + A   + +M     +P I TYNTLI GL R+  +    + 
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E+  K    PD  TY  +I  YCK G ++ A   +N+M     KP  VT N L++G  
Sbjct: 543 LNELMEKG-LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLC 601

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
             G +  A  + E  +  G   DV+T+++LI   C++G ++  L    +M+ + L P+ +
Sbjct: 602 LNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAF 661

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV-IVAE 497
           T+ ++++AL +  R  +A+  L +L  +  + + F  +P++    K  +VDEA     A+
Sbjct: 662 TYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSF-SSPLL----KPSSVDEAESGKDAK 716

Query: 498 MEEKRCKPDKVT----FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
            EE+  +  + +    +T L+ G C  G+  EA +I ++M++ G + D  T  +L+  L+
Sbjct: 717 TEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLV 776

Query: 554 K 554
           K
Sbjct: 777 K 777



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 147/335 (43%), Gaps = 37/335 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N V+ +LC+   ++  Q +       G +P+       +++  +    + A  L  + 
Sbjct: 452 TLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEM 511

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++T S   YN+L+  L +     EA+    E       PD  T+NI+I    + G++
Sbjct: 512 IEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDL 571

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF+F   M      PD+VT NTL++GLC   ++ +  +L +    K +   DV+TY +
Sbjct: 572 ENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK-KVDVITYNT 630

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G +D A   + +M + G++P A T+NV++    + G    A+ M  ++   G
Sbjct: 631 LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG 690

Query: 398 YL----------PDVV-------------------------TFSSLIDGYCRNGQLNQGL 422
            L          P  V                          ++ L++G C +GQ  +  
Sbjct: 691 TLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAK 750

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCK-ENRLNDA 456
            + DEM  K +S +  T+  L+  L K + RL  A
Sbjct: 751 AILDEMMQKGMSVDSSTYITLMEGLVKRQKRLTHA 785


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 201/434 (46%), Gaps = 33/434 (7%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L+   +F   N +M  + EM +                 PN       ++   +  + D 
Sbjct: 315 LAREGNFNRMNELMEKMVEMDIQ----------------PNVVTFGILINHMCKFRRVDD 358

Query: 210 AKGLLSQFRPGE--------VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--- 258
           A  +L +   G+        V     +YN+L++ L K     E + + +   R+ SQ   
Sbjct: 359 ALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLME---RMRSQKGC 415

Query: 259 -PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            PDT T+N LI G  + GE++K  E F +M   G +P++VT NTL+ G+CR   V+    
Sbjct: 416 APDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVN 475

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
              E + +     D VTYT++I+ +C +   +KA  ++NEM   G  P A+ +  LI GF
Sbjct: 476 FFVEAQRRG-MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGF 534

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G M  A ++   +   G  PD V +++LI G+CR  + ++  ++  EM+   L P+ 
Sbjct: 535 SQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDT 594

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  LI    K   L  A++ ++++    +VP    Y  VI+ +C  GN +EA  I  +
Sbjct: 595 ITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKD 654

Query: 498 ME-EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           M+   +  P+ V + ILI   C   ++  A+S+   M   G  P+  T N++   L    
Sbjct: 655 MKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEK 714

Query: 557 MPNEAFRIMQRASE 570
              + F  M R  E
Sbjct: 715 DLEKVFEFMDRMIE 728



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 194/400 (48%), Gaps = 9/400 (2%)

Query: 116 YLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
           ++C+     ++LEV++++   K      E   +++S+      YN ++  LC++G     
Sbjct: 349 HMCKFRRVDDALEVLEKMSGGK------ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEG 402

Query: 176 QVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
             + + MRS  G  P++      +    +AG+ +  K L  +     V  +    N+L+ 
Sbjct: 403 LGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVG 462

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            + +      AV  F E  R   + D  T+  LI     +   +KA E F +M   GCSP
Sbjct: 463 GMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSP 522

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D + Y TLISG  +   +A    +L E+K K    PD V Y ++I G+C+  K  +   +
Sbjct: 523 DAIVYYTLISGFSQAGRMADASFVLAELK-KLGIRPDTVCYNTLIGGFCRTNKFHRVFEM 581

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
             EM   G+KP  +T+N LI    K G++  A+ +  +M+  G +P V T+ ++I+ YC 
Sbjct: 582 LKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCL 641

Query: 415 NGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           NG  N+ +++  +MK  + + PN   + ILIN+LCK N++  A   ++ +K   + P   
Sbjct: 642 NGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTT 701

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            YN +  G     ++++    +  M E  C PD +T  IL
Sbjct: 702 TYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEIL 741



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 179/368 (48%), Gaps = 8/368 (2%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    L+ +F    V +S+F    L+  L +    +    +F E  +L +  ++   N L
Sbjct: 252 DEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSL 311

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL+R G   +  E    M      P++VT+  LI+ +C+   V    E+L+++    E
Sbjct: 312 LTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKE 371

Query: 328 -------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC-GIKPSAVTFNVLIDGFGK 379
                    PDVV Y ++I G CK+G+  +  G+   M S  G  P  +T+N LIDGF K
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + + + M   G  P+VVT ++L+ G CR G+++  +    E + + +  +  T
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T LINA C  N    A     ++  +   P   +Y  +I GF +AG + +A+ ++AE++
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           +   +PD V +  LI G C   +      +  +M   G  PD IT N+LI+   K G   
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611

Query: 560 EAFRIMQR 567
            A ++M++
Sbjct: 612 FAQKVMRK 619



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 116/263 (44%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ + C +   +    +F+ M   G  P++ +    +S   +AG+   A  +L++ 
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +   T  YN+L+    + N       M KE      +PDT T+N LI   S+ G++
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A +    M   G  P + TY  +I+  C         E+ K++K  S+  P+ V Y  
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNI 670

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK  K+  A  +  +M   G+ P+  T+N +  G     ++       +RM+   
Sbjct: 671 LINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHA 730

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQ 420
             PD +T   L +     G++ +
Sbjct: 731 CNPDYITMEILTEWLSAVGEIER 753


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 187/344 (54%), Gaps = 5/344 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N LLN L+K N  D+   ++KE  R+   P+++TFNIL     + G+V K  +F   M  
Sbjct: 218 NCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEE 277

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  PDIVTYNTLIS  CR   +     L + + ++    PD+V+YT++++G CK GK+ 
Sbjct: 278 EGFEPDIVTYNTLISCYCRKGRLDDAFYLYR-IMYRRNVLPDLVSYTALMNGLCKEGKVR 336

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  +++ M   G+ P  V+FN LI G+ K G M  +  +   M+  G  PD VT   LI
Sbjct: 337 EAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLI 396

Query: 410 DGYCRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           +GY +  ++   L L  E++  G  +S ++Y +  L+ ++C+E R   A+  L+++    
Sbjct: 397 EGYRKEARIVSALNLVVELERFGVPISTDIYDY--LMVSICEEGRPFAAKSLLQRISQRG 454

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
            VP   +YN +I+  CK+ ++ +A ++ +EM  +  KP  +T+  LI   C   R +EA 
Sbjct: 455 YVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAE 514

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           S+  +ML+ G  PD     +L+    K     +A  ++Q  +++
Sbjct: 515 SLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKE 558



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 189/396 (47%), Gaps = 1/396 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N ++  L ++   D    V+  M   G  PNS           + G  D     L +   
Sbjct: 218 NCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEE 277

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
                    YN+L++   ++   D+A Y+++  +R    PD  ++  L+ GL + G+V++
Sbjct: 278 EGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVRE 337

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A + F+ M   G +PDIV++NTLI G C+  ++     LL E+   S   PD VT   +I
Sbjct: 338 AHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEM-IGSGICPDKVTCQVLI 396

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            GY K  ++  A  +  E+   G+  S   ++ L+    + G   +A+ + +R+   GY+
Sbjct: 397 EGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYV 456

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P V  ++ LI+  C++  +   L +  EM  +N+ P+  T+  LI  LC+ +R  +A   
Sbjct: 457 PGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESL 516

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           ++++  + ++P P +   ++  +CK  ++ +A  ++    ++    D  ++  L+  +C 
Sbjct: 517 MEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCE 576

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
                  + + ++ML++G AP+  T   +I  L K 
Sbjct: 577 DADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKA 612



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 166/332 (50%), Gaps = 20/332 (6%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDM------GSFG-------------CSPDIVT 298
           QP    +  L+  L+   E K+A +F  ++       SF              C+ D V 
Sbjct: 122 QPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVI 181

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           ++ L+    R   +  G    +++  +    P V++   +++G  KL ++D+   +Y EM
Sbjct: 182 FDMLVKAYVREGMIKEGFTTFRKI-VEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEM 240

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              GI P++ TFN+L   F + G++       ERM   G+ PD+VT+++LI  YCR G+L
Sbjct: 241 ARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRL 300

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           +    L   M  +N+ P++ ++T L+N LCKE ++ +A +   ++    L P    +N +
Sbjct: 301 DDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTL 360

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I G+CK G + E+  ++ EM      PDKVT  +LI G+  + R+V A+++  ++ R G 
Sbjct: 361 ICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGV 420

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                  + L+  + + G P  A  ++QR S+
Sbjct: 421 PISTDIYDYLMVSICEEGRPFAAKSLLQRISQ 452



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 160/394 (40%), Gaps = 7/394 (1%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           LN L  + R+D  +    + E +RV +  N    T+N++    C+ G  D V    + M 
Sbjct: 221 LNGLLKLNRID--QCWQVYKEMARVGIHPNSY--TFNILTHVFCQDGDVDKVNDFLERME 276

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
            +G  P+       +S   R G+ D A  L        V      Y +L+N L K+    
Sbjct: 277 EEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVR 336

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           EA  +F         PD  +FN LI G  + G+++++    ++M   G  PD VT   LI
Sbjct: 337 EAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLI 396

Query: 304 SGLCRVNEVARGHELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
            G  +   +     L+ E+ +F    S D+  Y  V    C+ G+   A  +   ++  G
Sbjct: 397 EGYRKEARIVSALNLVVELERFGVPISTDIYDYLMV--SICEEGRPFAAKSLLQRISQRG 454

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P    +N LI+   K  ++  A  ++  M      P  +T+ +LI   CR  +  +  
Sbjct: 455 YVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAE 514

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L +EM    + P+      L++  CKE  +  A   L+       +     YN ++  +
Sbjct: 515 SLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTY 574

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           C+  +      +   M +    P+  TF  +I G
Sbjct: 575 CEDADATRLMELQDRMLKVGFAPNIQTFRQMIHG 608



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/158 (18%), Positives = 66/158 (41%), Gaps = 19/158 (12%)

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQL-------KWNDLVPK------------PF 473
           L P++  +  L++ L       +A +FL +L        +N+ V +            P 
Sbjct: 121 LQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPV 180

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           +++ ++  + + G + E      ++ E  C P  ++   L+ G     R+ +   ++ +M
Sbjct: 181 IFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEM 240

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            R+G  P+  T N L     + G  ++    ++R  E+
Sbjct: 241 ARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEE 278


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 220/453 (48%), Gaps = 47/453 (10%)

Query: 155 SFKTYNLVMRSLC-----EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  TY ++M   C     ++G     +++   +R+DG + N+    F    C      +A
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNT----FLKCLCYAKRTDEA 219

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILI 268
              LL +          F YN+++ +L   + + EA+ M     +     PD  ++ ++I
Sbjct: 220 LSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVI 279

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL   GE+ KA   F +M   G  P++VTYN+++  LC+   + +   +L+++ F +  
Sbjct: 280 HGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM-FDNSI 338

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD VTYT++I GY  LG+  +A  ++ EM   G+ P  VTFN L+D   K      A  
Sbjct: 339 QPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAE 398

Query: 389 MRERMLSFGYLPDVVTFSSLIDGY-----------------------------------C 413
           +   + + G+ PD++++S L+ GY                                    
Sbjct: 399 IFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHA 458

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           + G +++ L +  EM+G+ +SPNV T+  +I ALC+  RL DA   L Q+    L P   
Sbjct: 459 KRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTV 518

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRC-KPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           +Y+ +I GFC  G++ +A  +V+EM ++   +P+   F+ +I   C +GR++ A  +FN 
Sbjct: 519 VYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNL 578

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           ++ IG  PD  T NSLI      G  ++AF ++
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVL 611



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 211/450 (46%), Gaps = 38/450 (8%)

Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN V++SLC      +++ ++    + DG  P+       +      G+   A  L ++
Sbjct: 238 SYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNE 297

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                V  +   YNS+++AL K    D+A  + ++ F    QPD  T+  +I G S +G 
Sbjct: 298 MVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGR 357

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            K+A + F +M   G  PDIVT+N+L+  LC+        E+   +  K    PD+++Y+
Sbjct: 358 WKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGH-KPDIISYS 416

Query: 337 SVISGYC-----------------------------------KLGKMDKATGIYNEMNSC 361
            ++ GY                                    K G MD+A  I+ EM   
Sbjct: 417 ILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ 476

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+ P+ VT+  +I    ++G +  A     +M+S G  P+ V + SLI G+C +G L + 
Sbjct: 477 GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA 536

Query: 422 LKLCDEMKGKNL-SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            +L  EM  + +  PN+  F+ +I++LC E R+ +A+     +      P  F +N +ID
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLID 596

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+C  G +D+A  ++  M     +PD VT++ LI G+   GR+ + + +F +ML     P
Sbjct: 597 GYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKP 656

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +T + ++  L + G  + A ++     E
Sbjct: 657 TTVTYSLVLDGLFRAGRTSAAKKMFHEMIE 686



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 201/434 (46%), Gaps = 35/434 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +M SLC+         +F  + + GH P+       +      G+      L    
Sbjct: 379 TFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSM 438

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +   +  +N L+NA  K+   DEA+ +F E       P+  T+  +I  L R+G +
Sbjct: 439 TDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRL 498

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E    M S G  P+ V Y++LI G C   ++ +  EL+ E+  +    P++  ++S
Sbjct: 499 ADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSS 558

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C  G++  A  ++N +   G +P   TFN LIDG+  VG M  A  + + M+S G
Sbjct: 559 IIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAG 618

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+S+LI+GY ++G+++ GL L  EM  K + P   T++++++ L +  R + A+
Sbjct: 619 TEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAK 678

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA--------------------NVIVAE 497
           +   ++  +        Y  ++ G C+    DEA                     +I A 
Sbjct: 679 KMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHAL 738

Query: 498 MEEKRCK---------------PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            + KR +               P+  T+ ++II    +G + EA  +F+ M + GCAP  
Sbjct: 739 YKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSS 798

Query: 543 ITVNSLISCLLKGG 556
             +N +I  LL+ G
Sbjct: 799 RLLNDIIRMLLQKG 812



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 207/452 (45%), Gaps = 45/452 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGL 213
           TYN ++ +LC+    D  ++V   M  +   P+    + MI  +  SC+   K +AAK  
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGY--SCLGRWK-EAAKMF 365

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT---------- 263
               R G +      +NSL+++L K   + EA  +F        +PD  +          
Sbjct: 366 KEMTREGLIP-DIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424

Query: 264 -------------------------FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
                                    FNILI   ++ G + +A   F +M   G SP++VT
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y T+I+ LCR+  +A   E L ++       P+ V Y S+I G+C  G + KA  + +EM
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQM-ISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEM 543

Query: 359 NSCGI-KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
              GI +P+   F+ +I      G +++A+ +   ++  G  PD+ TF+SLIDGYC  G+
Sbjct: 544 MDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGK 603

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +++   + D M      P+V T++ LIN   K  R++D     +++    + P    Y+ 
Sbjct: 604 MDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSL 663

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           V+DG  +AG    A  +  EM E        T+TI++ G C      EAI++F+K+  + 
Sbjct: 664 VLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMN 723

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
              +   +N++I  L K     EA  +    S
Sbjct: 724 LKFEIAILNTMIHALYKVKRREEAHDLFASVS 755



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 195/408 (47%), Gaps = 2/408 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N+++ +  + G+ D   ++F  MR  G  PN       +++  R G+   A   LSQ  
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGEV 277
              +  +T +Y+SL+       +  +A  +  E   +   +P+   F+ +I  L   G V
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  +   G  PDI T+N+LI G C V ++ +   +L +    +   PDVVTY++
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVL-DAMVSAGTEPDVVTYST 628

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GY K G++D    ++ EM    +KP+ VT+++++DG  + G   +A+ M   M+  G
Sbjct: 629 LINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESG 688

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               + T++ ++ G CRN   ++ + L  ++   NL   +     +I+AL K  R  +A 
Sbjct: 689 TAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAH 748

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  + LVP    Y  +I    K G+V+EA+++ + ME+  C P       +I   
Sbjct: 749 DLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRML 808

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             KG +V+A    +K+     + +  T + LIS     G   E  + +
Sbjct: 809 LQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 162/353 (45%), Gaps = 4/353 (1%)

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
           P  V ++   Y  L++   +    D     F    R   + D    N  ++ L       
Sbjct: 158 PRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTD 217

Query: 279 KAFE-FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +A     + M   GC PD  +YNT+I  LC  +      ++L  +      SPDVV+YT 
Sbjct: 218 EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTM 277

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G    G++ KA  ++NEM   G+ P+ VT+N ++    K   M  AE +  +M    
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT++++I GY   G+  +  K+  EM  + L P++ TF  L+++LCK  R  +A 
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +      P    Y+ ++ G+   G   + N +   M +     D   F ILI  H
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +G M EA+ IF +M   G +P+ +T  ++I+ L + G   +A   M++ S+
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADA---MEKLSQ 507



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 3/176 (1%)

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA-RRFL 460
           V T+  L+D  CR  + + G      +    L  +       +  LC   R ++A    L
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGHCM 519
            ++     VP  F YN VI   C      EA  ++  M +   C PD V++T++I G  M
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           +G + +A ++FN+M++ G  P+ +T NS++  L K    ++A  ++ R   D ++Q
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA-ELVLRQMFDNSIQ 339


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 165/345 (47%), Gaps = 34/345 (9%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P   ++N +I GL+ I ++ +A++FF  M   GC PD++ + TLI G C+  +   GH+
Sbjct: 4   EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLG------------------------------- 346
           LL +      F PDV  YTSVI GYCK G                               
Sbjct: 64  LLNQA--LKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121

Query: 347 -KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            ++D+A  ++ E+ + G  P+ V +  +IDG  K G +       E M     +P   T+
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           + +IDG C+   L    K+ ++M  K   P+  T+T LI+   K +++++AR+ L  +  
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    Y  ++ GFCK   ++EA  ++A+M E+ C+P    FT L+  +  KGR  E
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           A  +  +M   GCAPD I   SLI  L   G   EA  +     E
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 346



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 184/369 (49%), Gaps = 2/369 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++    +    D  + + D M + G  P +      V    +    + AK +++Q 
Sbjct: 215 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 274

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R        F++ SLL+  + +  A+EA  +  E       PD   +  LI  L   G V
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 334

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   GC+PD +TY T+I    ++  V    E+L E+  KS   PD   Y S
Sbjct: 335 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL-ELMAKSGVGPDCFAYNS 393

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY KL ++D+A G+Y+ M + GIKP+AVTFNVL+ G  K G    A  + + ML   
Sbjct: 394 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKE 453

Query: 398 YLP-DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            +P  +V+++ LIDG  + G++++      EM  + + P  +T+T LI +L K  R+ +A
Sbjct: 454 EVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 513

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++ ++ +    + P    Y+ +I G   +  VD A  +  EM ++ C P++VT+ +L  G
Sbjct: 514 KKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRG 573

Query: 517 HCMKGRMVE 525
               GR ++
Sbjct: 574 FRAAGRALD 582



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 199/448 (44%), Gaps = 32/448 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           +YN V+  L  +   D     F+ M  +G  P+       +    +AG+      LL+Q 
Sbjct: 9   SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQA 68

Query: 217 ---FRPG---------------------------EVTMSTFMYNSLLNALVKQNNADEAV 246
              FRP                            + ++    Y +++  L      DEA 
Sbjct: 69  LKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEAC 128

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F+E       P+   +  +I GL + G ++   + F +M    C P   TY  +I GL
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+   +    ++ +++  K    PD +TYT++I G+ K  KMD+A  + + M + G +P+
Sbjct: 189 CKAQMLPDACKVFEQMVQKG-CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 247

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           AVT+  ++ GF K+  +  A+ +  +M   G  P +  F+SL+  Y   G+  +  ++  
Sbjct: 248 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 307

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM  +  +P+V  +T LI+ L    R+ +AR     +      P    Y  +I  F K G
Sbjct: 308 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 367

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           NV+ A  I+  M +    PD   +  L+ G+    R+ +A  ++++M+  G  P+ +T N
Sbjct: 368 NVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN 427

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQNL 574
            L+  L K G  + AF + +   E + +
Sbjct: 428 VLMHGLFKDGKTDRAFSLFKEMLEKEEV 455



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 206/445 (46%), Gaps = 35/445 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V++ L +    D    +F+ +++ G  PN       +   ++AG+ +       + 
Sbjct: 110 SYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM 169

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y  +++ L K     +A  +F++  +    PDT T+  LI G S+  ++
Sbjct: 170 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 229

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK----------FKSE 327
            +A +    M + G  P  VTY +++ G C+++ +    E++ +++          F S 
Sbjct: 230 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 289

Query: 328 FS------------------------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            S                        PDV+ YTS+I      G++ +A  +++ M   G 
Sbjct: 290 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 349

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P A+T+  +I  F K+GN+ +A  + E M   G  PD   ++SL+DGY +  +++Q   
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 409

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM-YNPVIDGF 482
           + D M    + PN  TF +L++ L K+ + + A    K++   + VP   + Y  +IDG 
Sbjct: 410 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGL 469

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            KAG V EA +   EM ++   P+  T+T LI      GR+ EA  +   M+++G  PD 
Sbjct: 470 GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 529

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQR 567
              ++LI+ L+   M + A+ + Q 
Sbjct: 530 QAYSALITGLIDSSMVDTAWDVFQE 554



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 192/392 (48%), Gaps = 2/392 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +V+  LC+  +      VF+ M   G +P++      +    +A K D A+ LL   
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y S+++   K +  +EA  +  +      +P  + F  L+      G  
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A++   +M + GC+PD++ Y +LI  L     V     +   +  K   +PD +TY +
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG-CAPDALTYGT 358

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  + K+G ++ A  I   M   G+ P    +N L+DG+ K+  +  A  + +RM++ G
Sbjct: 359 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 418

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINALCKENRLNDA 456
             P+ VTF+ L+ G  ++G+ ++   L  EM + + + P + ++TILI+ L K  R+++A
Sbjct: 419 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +++    ++P+   Y  +I    KAG + EA  +V +M +    PD   ++ LI G
Sbjct: 479 FLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 538

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
                 +  A  +F +M++ GCAP+++T   L
Sbjct: 539 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 33/236 (13%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G +P+ V++N +I G   +  M  A      M+  G  PDV+ F++LI G+C+ GQ   G
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCK-------------------------------- 449
            KL ++   K   P+V+ +T +I+  CK                                
Sbjct: 62  HKLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R+++A    ++LK     P    Y  VIDG  KAG +++      EM    C P + T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +T++I G C    + +A  +F +M++ GC PD IT  +LI    K    +EA +++
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 2/236 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++++  ++G  ++   + + M   G  P+       +   ++  + D A G+  + 
Sbjct: 355 TYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRM 414

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-TFNILIQGLSRIGE 276
               +  +   +N L++ L K    D A  +FKE       P T  ++ ILI GL + G 
Sbjct: 415 VASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGR 474

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +AF  F +M   G  P+  TY +LI  L +   +    +L++++  K   +PDV  Y+
Sbjct: 475 VSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM-VKLGVNPDVQAYS 533

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           ++I+G      +D A  ++ EM   G  P+ VT+ VL  GF   G  +  E +++ 
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQH 589



 Score = 45.8 bits (107), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 33/66 (50%)

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C+P  V++  +I G     +M EA   FN M+  GC PD I   +LI    K G P    
Sbjct: 3   CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGH 62

Query: 563 RIMQRA 568
           +++ +A
Sbjct: 63  KLLNQA 68


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 185/362 (51%), Gaps = 2/362 (0%)

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
           CD     L + + G V++ ++ +  L++A  K   A++AV  F        +PD +T+N+
Sbjct: 108 CDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNV 167

Query: 267 LIQGLSRIGEV-KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           +++ + R       AF  + +M    CSP++ T+  L+ GL +    +   ++  ++  +
Sbjct: 168 ILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR 227

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              SP+ VTYT +ISG C+ G  + A  ++ EM + G  P +V  N L+DGF K+G MV 
Sbjct: 228 G-ISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVE 286

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +       G++  +  +SSLIDG  R  +  Q  +L   M  +N+ P++  +TILI 
Sbjct: 287 AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQ 346

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            L K  ++ DA + L+ +    + P  + YN VI   C  G ++E   +  EM E    P
Sbjct: 347 GLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  T TILI   C  G + +A  IF ++ + GC+P   T N+LI  L K G   EA  ++
Sbjct: 407 DACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466

Query: 566 QR 567
            +
Sbjct: 467 HK 468



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 218/511 (42%), Gaps = 77/511 (15%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           VIK   N +LG +F  ++     L  S +++ LV+  L E    D      + ++S G  
Sbjct: 66  VIKEEVNRQLGFRFFIWASRRERL-RSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 124

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY- 247
            +S      +S+  + G  + A     + +  +     F YN +L  +++++      + 
Sbjct: 125 VDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFA 184

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           ++ E  +    P+ +TF IL+ GL + G    A + F DM   G SP+ VTY  LISGLC
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM------------------- 348
           +        +L  E+K    + PD V + +++ G+CKLG+M                   
Sbjct: 245 QRGSPEDARKLFYEMKASGNY-PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGL 303

Query: 349 ----------------DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
                            +A  +Y  M    IKP  + + +LI G  K G +  A  +   
Sbjct: 304 RGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRS 363

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G  PD   ++++I   C  G L +G  L  EM      P+  T TILI ++C+   
Sbjct: 364 MPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC--------- 503
           +  A     +++ +   P    +N +IDG CK+G + EA +++ +ME  R          
Sbjct: 424 VRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAH 483

Query: 504 ------------------------------KPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
                                          PD V++ +LI G C +G +  A+ + N +
Sbjct: 484 SGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVL 543

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              G +PD +T N+LI+ L + G   EAF++
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 140/315 (44%), Gaps = 35/315 (11%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D++ F +LI   +++G  +KA E F  M  F C PD+ TYN ++  + R           
Sbjct: 126 DSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMR----------- 174

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           ++V F   F+                        +YNEM  C   P+  TF +L+DG  K
Sbjct: 175 EDVFFMLAFA------------------------VYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G    A+ M + M   G  P+ VT++ LI G C+ G      KL  EMK     P+   
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVA 270

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
              L++  CK  R+ +A   L+  + +  V     Y+ +IDG  +A    +A  + A M 
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           ++  KPD + +TILI G    G++ +A+ +   M   G  PD    N++I  L   G+  
Sbjct: 331 KRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLE 390

Query: 560 EAFRIMQRASEDQNL 574
           E   +    SE ++ 
Sbjct: 391 EGRSLQLEMSETESF 405



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 164/382 (42%), Gaps = 45/382 (11%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+  +    +    +AGK + A  LL       +T  T+ YN+++ AL  +   +E   +
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSL 395

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
             E     S PD  T  ILI  + R G V+KA E F ++   GCSP + T+N LI GLC+
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCK 455

Query: 309 VNEVARGH---------------------------------ELLKEVKFKSEF-----SP 330
             E+                                      +LK  K  + F     SP
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSP 515

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+V+Y  +I+G+C+ G +D A  + N +   G+ P +VT+N LI+G  +VG    A  + 
Sbjct: 516 DIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
                F + P V  + SL+   CR  +L     L  +   K    +  T    I    KE
Sbjct: 576 YAKDDFRHSPAV--YRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETAN-EIEQCFKE 632

Query: 451 NRLNDARRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
                A R L +L  + ++L   P  Y   + G C++G   EA ++ + + EK+      
Sbjct: 633 GETERALRRLIELDTRKDELTLGP--YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPP 690

Query: 509 TFTILIIGHCMKGRMVEAISIF 530
           +   LI G C + ++  AI +F
Sbjct: 691 SCVKLIHGLCKREQLDAAIDVF 712


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 207/407 (50%), Gaps = 3/407 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRS-DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           N +++ L E    D  + ++D M   D    N          C+     +  K + +++ 
Sbjct: 173 NRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWG 232

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
            G +    F YN L++   ++ +    + +  E       P   T+  LI  L + G+++
Sbjct: 233 AGCIPHVVF-YNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLE 291

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           K    F +M   G SP++  YN++I  LC+     +   +LK++ F S   PD++T+ ++
Sbjct: 292 KIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM-FASGCDPDIITFNTL 350

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+G C  G + KA     E     + P+ +++  LI GF   G +++A  +   M+  G+
Sbjct: 351 ITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGH 410

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PDVVTF +LI G    G++++ L + ++M  + + P+V  + +LI+ LCK++ L  A+ 
Sbjct: 411 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKN 470

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L+++   ++ P  F+Y  +IDGF ++ N+ +A  I   ME K  +PD V+   +I G+C
Sbjct: 471 ILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYC 530

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             G M EAI   + M ++GC PD+ T  ++IS   K G  N A R +
Sbjct: 531 QFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 577



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 198/406 (48%), Gaps = 11/406 (2%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           +++R LC  G  +    + +     G +P+       +    R G  D  +GLL     G
Sbjct: 209 VLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRG--DMGRGLLLL---G 263

Query: 221 EVTMSTFM-----YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           E+    F+     Y SL+N L K+ + ++   +F E  +    P+   +N +I  L +  
Sbjct: 264 EMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCW 323

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
              +A      M + GC PDI+T+NTLI+GLC    V +    L+E   + E +P+ ++Y
Sbjct: 324 SATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA-IRRELNPNQLSY 382

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I G+C  G++  A+ +  EM   G  P  VTF  LI G    G +  A  +RE+M  
Sbjct: 383 TPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 442

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               PDV  ++ LI G C+   L     + +EM  KN+ P+ + +  LI+   +   L D
Sbjct: 443 RQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGD 502

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           AR+  + ++   + P     N +I G+C+ G + EA + ++ M +  C PD+ T+T +I 
Sbjct: 503 ARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVIS 562

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           G+  +G +  A+     M++  C P+ +T +SLI+   K G  + A
Sbjct: 563 GYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSA 608



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 207/452 (45%), Gaps = 41/452 (9%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           GLK +E +R           YN+++   C  G      ++   M + G LP        +
Sbjct: 223 GLKLIE-ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLI 281

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           +   + G  +    L  + R   ++ +  +YNS+++AL K  +A +A+ + K+ F     
Sbjct: 282 NCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCD 341

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFF---------------------------------- 284
           PD  TFN LI GL   G V+KA  F                                   
Sbjct: 342 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDL 401

Query: 285 -YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
             +M   G +PD+VT+  LI GL    +V+    +++E   + +  PDV  Y  +ISG C
Sbjct: 402 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL-IVREKMTERQVFPDVNIYNVLISGLC 460

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K   +  A  I  EM    ++P    +  LIDGF +  N+  A  + E M   G  PD+V
Sbjct: 461 KKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIV 520

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           + +++I GYC+ G +++ +     M+     P+ +T+T +I+   K+  LN A R+L  +
Sbjct: 521 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 580

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                 P    Y+ +I+G+CK G+ D A  + A M+ +   P+ VT+TILI     K ++
Sbjct: 581 IKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 640

Query: 524 VEAISIFNKMLRIGCAPDDIT----VNSLISC 551
           + A   F  ML   C+P+D+T    VN L SC
Sbjct: 641 LRAGLYFETMLLNHCSPNDVTLHYLVNGLTSC 672



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 214/467 (45%), Gaps = 16/467 (3%)

Query: 112 TCARYLCEKL-SPLNSLEV---IKRLDNPKLGLKFLEFSRVNLSLNHSFK-------TYN 160
           T AR L   L SPL+   +   +  L +P L +  L +S+   S +H           ++
Sbjct: 46  TWARSLAALLPSPLSDAHLAAAVSSLPDPDLAVALLSWSQ---SPDHHVALQDPTPLAHS 102

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
            ++R L      D+V      M   G  P    +   V++   AG    A  +  + R  
Sbjct: 103 TLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQ 162

Query: 221 EVTMSTFMY-NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             ++    + N LL  LV+Q   D+A  ++ E     S  D ++  +L++GL   G V++
Sbjct: 163 YGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEE 222

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
             +        GC P +V YN LI G CR  ++ RG  LL E++ K  F P +VTY S+I
Sbjct: 223 GLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKG-FLPTLVTYGSLI 281

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +   K G ++K   ++ EM   G+ P+   +N +ID   K  +   A  + ++M + G  
Sbjct: 282 NCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCD 341

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD++TF++LI G C  G + +      E   + L+PN  ++T LI+  C    L  A   
Sbjct: 342 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDL 401

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L ++      P    +  +I G   AG V EA ++  +M E++  PD   + +LI G C 
Sbjct: 402 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 461

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           K  +  A +I  +ML     PD+    +LI   ++     +A +I +
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 508



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 195/468 (41%), Gaps = 51/468 (10%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           K+ D  K+G  FLE  +  LS N   + YN V+ +LC+        V+   M + G  P+
Sbjct: 286 KKGDLEKIGSLFLEMRKRGLSPN--VQIYNSVIDALCKCWSATQAMVILKQMFASGCDPD 343

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                  ++     G    A+  L +    E+  +   Y  L++    +     A  +  
Sbjct: 344 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLM 403

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
           E       PD  TF  LI GL   G+V +A      M      PD+  YN LISGLC+ +
Sbjct: 404 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKH 463

Query: 311 EVARGHELLKEVKFKS----------------------------EF------SPDVVTYT 336
            +     +L+E+  K+                            EF       PD+V+  
Sbjct: 464 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCN 523

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GYC+ G M +A    + M   G  P   T+  +I G+ K GN+  A      M+  
Sbjct: 524 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 583

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+VVT+SSLI+GYC+ G  +    L   M+ + LSPNV T+TILI +L K++++  A
Sbjct: 584 KCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 643

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGF------------CKAGNV---DEANVIVAEMEEK 501
             + + +  N   P     + +++G             C    V   D   V+  ++   
Sbjct: 644 GLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFD 703

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
              P    +  +I   C    + EA+   N+M + G  P+ IT  SL+
Sbjct: 704 IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 751



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 176/390 (45%), Gaps = 24/390 (6%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           LN +  +Y  ++   C  G   +   +   M   GH P+       +   + AGK   A 
Sbjct: 375 LNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 434

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +  +    +V     +YN L++ L K++    A  + +E      QPD + +  LI G 
Sbjct: 435 IVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGF 494

Query: 272 SR---IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            R   +G+ +K FEF   M   G  PDIV+ N +I G C+   ++     +  ++ K   
Sbjct: 495 IRSENLGDARKIFEF---MEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMR-KVGC 550

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD  TYT+VISGY K G ++ A     +M     KP+ VT++ LI+G+ K G+  SAE 
Sbjct: 551 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEG 610

Query: 389 MRERMLSFGYLPDVVTFSSLIDG-YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
           +   M +    P+VVT++ LI   + ++  L  GL   + M   + SPN  T   L+N L
Sbjct: 611 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYF-ETMLLNHCSPNDVTLHYLVNGL 669

Query: 448 ------------CKENRLNDARRFL---KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
                       C  + ++     L   K+L ++   P+   YN +I   C+   + EA 
Sbjct: 670 TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 729

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
                M +K   P+ +TF  L+ G C  G+
Sbjct: 730 DFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 142/366 (38%), Gaps = 60/366 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++  L   G      +V + M      P+  +    +S   +     AAK +L + 
Sbjct: 416 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEM 475

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    F+Y +L++  ++  N  +A  +F+       +PD  + N +I+G  + G +
Sbjct: 476 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMM 535

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   GC PD  TY T+ISG  +   +      L ++  K +  P+VVTY+S
Sbjct: 536 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM-IKRKCKPNVVTYSS 594

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK G  D A G++  M +  + P+ VT+ +LI    K   ++ A    E ML   
Sbjct: 595 LINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 654

Query: 398 YLPDVVTFSSLIDGY--------------------------------------------- 412
             P+ VT   L++G                                              
Sbjct: 655 CSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNA 714

Query: 413 -----CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
                CR+  L + L   + M  K   PN  TF  L+   C            K + W  
Sbjct: 715 IIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG---------KSMNWRT 765

Query: 468 LVPKPF 473
           ++P  F
Sbjct: 766 ILPNEF 771



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSS 407
           D        M+  G  P+      L+  +   G +  A  M ER+   +G LP+V   + 
Sbjct: 115 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNR 174

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+       + +   KL DEM G++   + Y+  +L+  LC E R+ +  + ++      
Sbjct: 175 LLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAG 234

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
            +P    YN +IDG+C+ G++    +++ EME K   P  VT+  LI     KG + +  
Sbjct: 235 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 294

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           S+F +M + G +P+    NS+I  L K     +A  I+++
Sbjct: 295 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQ 334



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA-----KG 212
           TY+ ++   C+ G  DS + +F  M+++   PN       + S  +  K   A       
Sbjct: 591 TYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETM 650

Query: 213 LLSQFRPGEVTMSTFM----------YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           LL+   P +VT+   +           NS+     + +  D  + +FK+       P   
Sbjct: 651 LLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNS 710

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            +N +I  L R   +++A +F   M   G  P+ +T+ +L+ G C V +      +L   
Sbjct: 711 AYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNE 770

Query: 323 KFKSEF 328
             + EF
Sbjct: 771 FQQEEF 776


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 203/412 (49%), Gaps = 1/412 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T ++ +   C +G       V   +   G+ PN+  +   +      G+   A    
Sbjct: 118 SIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFH 177

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  + +    Y +L+N L K   + +A  + +E      +P+   +N++I    + 
Sbjct: 178 DNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKD 237

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
               KA + +  +   G  PDI+TY +LI G CR  +     +L+ E+  K+  +P+V T
Sbjct: 238 ELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN-INPNVYT 296

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           +  +I  +C+ GKM +A G++N M   G +P  VTFN LI G    GN++ A  + + + 
Sbjct: 297 FNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVF 356

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G LPDV +++ LI GYC+  ++++ + L +EM+ KN+  ++  ++ LI+ LCK  R++
Sbjct: 357 ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRIS 416

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A      +  +   P    YN +ID FCK  ++D    +   M  K   P  +T+ ILI
Sbjct: 417 YAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 476

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G+C   R+ EA+++ + M     APD IT NSL   L K G  ++A+ + +
Sbjct: 477 NGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFK 528



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 181/347 (52%), Gaps = 1/347 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   +N+++ ++VK  +   A+ + K+       P  +T +I I     +GE+  AF   
Sbjct: 83  SVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVL 142

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G  P+ +T  T++ GLC   EV +  +    V  +     D V Y ++I+G CK
Sbjct: 143 GIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLL-DEVCYGTLINGLCK 201

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +G+   A  +  EM    +KP+ V +N++ID F K      A  +  +++  G  PD++T
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++SLI G+CR GQ  +  +L  EM  KN++PNVYTF +LI+A C++ ++ +A+     + 
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
                P    +N +I G C  GNV EA  +   + E+   PD  ++TILIIG+C   R+ 
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           EA+S+FN+M       D +  +SLI  L K G  + A+ +    + D
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 167/330 (50%), Gaps = 1/330 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++ S C+  L    + ++  +   G  P+       +    R G+    K L+ +  
Sbjct: 227 YNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV 286

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + +N L++A  ++    EA  MF    +   QPD  TFN LI G    G V 
Sbjct: 287 NKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVL 346

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A + F  +   G  PD+ +Y  LI G C+   +     L  E++ K+    D+V Y+S+
Sbjct: 347 EARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKN-MVLDIVLYSSL 405

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G++  A  +++ +N+ G  P+ +T+N+LID F K+ ++     + + M   G 
Sbjct: 406 IDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGL 465

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P V+T++ LI+GYC++ ++ + + L   M+ KNL+P+  T+  L + LCK  R++DA  
Sbjct: 466 TPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWE 525

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             K +           YN ++D FCKA +V
Sbjct: 526 LFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 149/304 (49%), Gaps = 5/304 (1%)

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           Y F ++ R +S        IL    S    +  A   F  + +    P ++ +NT+I  +
Sbjct: 39  YAFHKFLRFFSHCPKQNAKIL----SSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSV 94

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
            ++        LLK++ FK   +P + T +  I+ YC LG+M  A  +   +   G +P+
Sbjct: 95  VKMKHCPVAISLLKQMVFKG-VTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPN 153

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            +T   ++ G    G +  A    + + + G L D V + +LI+G C+ G+     +L  
Sbjct: 154 NITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQ 213

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM+G+ + PN+  + ++I++ CK+     AR    ++    + P    Y  +I GFC+ G
Sbjct: 214 EMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTG 273

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
              E   ++ EM  K   P+  TF +LI   C KG+M+EA  +FN M++ G  PD +T N
Sbjct: 274 QWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFN 333

Query: 547 SLIS 550
           +LIS
Sbjct: 334 TLIS 337



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 100/218 (45%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A  ++N + +    PS + FN +I    K+ +   A  + ++M+  G  P + T S 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
            I+ YC  G++     +   +  +   PN  T T ++  LC    +  A  F   +    
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           ++     Y  +I+G CK G   +A  ++ EME +  KP+ V + ++I   C      +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            ++ K++ +G  PD +T  SLI    + G   E  ++M
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLM 282



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 64/155 (41%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++  LC+ G       +F  + +DG  PN       + +  +    D    L     
Sbjct: 402 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC 461

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +T +   YN L+N   K     EA+ +          PD+ T+N L  GL + G + 
Sbjct: 462 GKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRIS 521

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
            A+E F  M   G   D+ TYN L+   C+  +VA
Sbjct: 522 DAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 556


>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
          Length = 967

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 207/402 (51%), Gaps = 13/402 (3%)

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE-VTMSTF 227
           M L  + Q+  +Y + +   P+  +    + +CI AG  +    LL++ +  + + +   
Sbjct: 353 MDLRLAFQLFEEYKQYNQ--PDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQSIQLDEI 410

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            YN+L+    ++   +EA+ +F+E  ++  +P+  +FN L+    +  ++  A+ +F +M
Sbjct: 411 TYNTLIKGCGRKKRLNEAISLFEEMKQIGIKPNRISFNSLLDSCVKCNKMNVAWRYFEEM 470

Query: 288 -GSFGCSPDIVTYNTLISGL----CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
              +G  PD  TY+ L++G+       +E+ R   LL++++   +F PD + Y S+I   
Sbjct: 471 RKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDAC 530

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            K  ++ K   ++ EM +  I+PS+VT+ +LI  +GK+ ++  A  M E M       + 
Sbjct: 531 VKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKIPIND 590

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VT+  L+D   RN +L+Q L+  ++MK +NL  N   +T +I   CK N+  +A ++   
Sbjct: 591 VTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLYTTIIKGFCKLNQTEEAMKYFSL 650

Query: 463 LKWNDLV-PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           +K N    P    YN ++DG  K G +++A+ +  E+ E   KPD +TF+ L+ GHC +G
Sbjct: 651 MKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELVESTIKPDLITFSTLLKGHCRRG 710

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            M         ML     PD+    SL+  +L+  +  + + 
Sbjct: 711 NMKRLNETVQTMLHYQINPDE----SLLQLILESCLNQQQYH 748



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 218/481 (45%), Gaps = 57/481 (11%)

Query: 140 LKFLEFSRVNLSLNHSF-----KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           LKF     +N S+   F     K  ++++R L E+   ++  V    +    HL +S + 
Sbjct: 216 LKFKLSKEINESIKDEFEKTAQKICDMLLRQLIELSNSNNHWVSLICI----HLISSSIS 271

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
           +  + S     K      LL+  R   ++  +    N++++   K N  D+A   F+   
Sbjct: 272 QLIMPS--ENNKSQWLNFLLTFMRDNAKIQPTIVTINTMIDQYFKNNQKDKAWKTFENLK 329

Query: 254 RLYSQPDTWTFNILIQGL--SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
              ++PD +T+  LI GL  S   +++ AF+ F +   +   PD + YN L+       +
Sbjct: 330 LTSTKPDNFTYTTLINGLKNSDNMDLRLAFQLFEEYKQYN-QPDQIIYNCLLDACINAGD 388

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           + RG +LL E+K       D +TY ++I G  +  ++++A  ++ EM   GIKP+ ++FN
Sbjct: 389 LNRGFQLLNEMKQSQSIQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIKPNRISFN 448

Query: 372 VLIDGFGKVGNM-VSAEYMRERMLSFG--------------------------------- 397
            L+D   K   M V+  Y  E    +G                                 
Sbjct: 449 SLLDSCVKCNKMNVAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLE 508

Query: 398 -------YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
                  + PD + ++SLID   +  ++ +G++L  EMK K++ P+  T+ ILI A  K 
Sbjct: 509 QIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKM 568

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
           N LN A R  +++K   +      Y  ++D   +   +D+A   + +M+ +    + V +
Sbjct: 569 NDLNGAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKSQNLPINTVLY 628

Query: 511 TILIIGHCMKGRMVEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           T +I G C   +  EA+  F+ M +     P+ IT NSL+  L+K G+ N+A ++ Q   
Sbjct: 629 TTIIKGFCKLNQTEEAMKYFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELV 688

Query: 570 E 570
           E
Sbjct: 689 E 689



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 132/250 (52%), Gaps = 7/250 (2%)

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           QF+P E+     +YNSL++A VK N   + + +FKE      +P + T+ ILI+   ++ 
Sbjct: 515 QFKPDEI-----LYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYGILIKAYGKMN 569

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++  AF  F +M       + VTY  L+    R + + +  + ++++K ++    + V Y
Sbjct: 570 DLNGAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKSQN-LPINTVLY 628

Query: 336 TSVISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           T++I G+CKL + ++A   ++ M  +    P+ +T+N L+DG  K G M  A+ + + ++
Sbjct: 629 TTIIKGFCKLNQTEEAMKYFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQELV 688

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                PD++TFS+L+ G+CR G + +  +    M    ++P+     +++ +   + + +
Sbjct: 689 ESTIKPDLITFSTLLKGHCRRGNMKRLNETVQTMLHYQINPDESLLQLILESCLNQQQYH 748

Query: 455 DARRFLKQLK 464
           +  +   Q +
Sbjct: 749 NGVQIYDQFQ 758



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 7/111 (6%)

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG----HCMKGRMVE 525
           P     N +ID + K    D+A      ++    KPD  T+T LI G      M  R+  
Sbjct: 300 PTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGLKNSDNMDLRL-- 357

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           A  +F +  +    PD I  N L+   +  G  N  F+++    + Q++QL
Sbjct: 358 AFQLFEEYKQYN-QPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQSIQL 407


>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 214/446 (47%), Gaps = 51/446 (11%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI-RAGKCDAAKGLLSQFRP- 219
           V ++L  + +     + F+++   G   ++P   F +   + R    + A+  L      
Sbjct: 88  VFQTLRHIKVPTKAFLFFNWIHEKG-FSHNPQTYFIMLEILGREKNLNIARNFLYSIEKR 146

Query: 220 --GEVTMSTFMYNSLLNA-----------------------------------LVKQNNA 242
             GEV +    +NSL+ +                                   L+K+   
Sbjct: 147 SNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRT 206

Query: 243 DEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
           + A  ++ E  + Y  +PDT+T+NILI+G  +   V + F FF +M SF C PD+VTYNT
Sbjct: 207 NMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNT 266

Query: 302 LISGLCRVNEVARGHELLKEVKFK-SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           L+ GLCR  ++   H L+  +  K  + SPDVVTYT++I GYC+  ++D+A  I  EMN 
Sbjct: 267 LVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNG 326

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLN 419
            G+KP+ VT+N LI G  +       + + E+M    G +PD  TF++LI+ +C  G L+
Sbjct: 327 RGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLD 386

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV-----PKPFM 474
           +  K+ + MK   +S +  ++++LI  LC++     A     +L   +++     PKP  
Sbjct: 387 EAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLA 446

Query: 475 --YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             Y  +    C+ G   +A  ++ ++  KR   D +++ I+I+GHC +G       +   
Sbjct: 447 ASYKCMFQYLCENGKTKKAERVLRQL-MKRGTQDPLSYQIVILGHCKEGSYENGYGLLVW 505

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMP 558
           MLR    PD    + LI   L+   P
Sbjct: 506 MLRRDFLPDIDIYDYLIDGFLRKDKP 531



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 164/326 (50%), Gaps = 22/326 (6%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN LI+     G  K++ + F +M   G SP +VT+N+++  L +        E+  E+ 
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG-- 381
                 PD  TY  +I G+CK   +D+    + EM S    P  VT+N L+DG  + G  
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKI 277

Query: 382 ----NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
               N+V+    + + LS    PDVVT+++LI GYCR  ++++ L + +EM G+ L PN+
Sbjct: 278 KVAHNLVNGMSKKCKDLS----PDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNI 333

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            T+  LI  LC+  + +  +  L+Q+K +   +P    +N +I+  C AGN+DEA  +  
Sbjct: 334 VTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFE 393

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR-------IGCAPDDITVNSLI 549
            M++     D  ++++LI   C KG   +A  +F+++          G  P   +   + 
Sbjct: 394 NMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMF 453

Query: 550 SCLLKGGMPNEAFRI----MQRASED 571
             L + G   +A R+    M+R ++D
Sbjct: 454 QYLCENGKTKKAERVLRQLMKRGTQD 479



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 203/487 (41%), Gaps = 48/487 (9%)

Query: 127 LEVIKRLDNPKLGLKFLEF--SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
           LE++ R  N  +   FL     R N  +    + +N ++RS  E GL      +F+ M+ 
Sbjct: 124 LEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKL 183

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNAD 243
            G  P        +   ++ G+ + AK +  +  +   V   T+ YN L+    K +  D
Sbjct: 184 IGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVD 243

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG---------------------------- 275
           E  Y FKE       PD  T+N L+ GL R G                            
Sbjct: 244 EGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTT 303

Query: 276 ---------EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
                    EV +A +   +M   G  P+IVTYNTLI GLC   +  +  E+L+++K   
Sbjct: 304 LIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDG 363

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD  T+ ++I+ +C  G +D+A  ++  M    +   + +++VLI    + G+   A
Sbjct: 364 GSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKA 423

Query: 387 EYMRERML-------SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           E + + +        S+G  P   ++  +    C NG+  +  ++  ++  +  + +  +
Sbjct: 424 EMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRG-TQDPLS 482

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + I+I   CKE    +    L  +   D +P   +Y+ +IDGF +      A   + +M 
Sbjct: 483 YQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKML 542

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           +   KP   T+  ++     +G + E+  +   ML      +       +  L   G+ +
Sbjct: 543 KSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQD 602

Query: 560 EAFRIMQ 566
           +AF+I +
Sbjct: 603 KAFKITE 609


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 189/397 (47%), Gaps = 1/397 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+ G  +   V+F  ++  G LP        ++   + GK +    LL +  
Sbjct: 210 YNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMS 269

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + +S  +YN++++A  K     EA        +    PD  T+NILI G    GEV 
Sbjct: 270 ERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVH 329

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA +        G  P+ V+Y  LI   C+  E  R  +LL ++  +    PD+VTY ++
Sbjct: 330 KAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGH-KPDLVTYAAL 388

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G    G++D A  + N+M   G+ P A  +NVL+ G  K G + +A+ +   ML    
Sbjct: 389 IHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNV 448

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD    ++L+DG+ R+G   +  KL +    K + P V  +  +I   CK   + DA  
Sbjct: 449 APDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALL 508

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K++      P  F Y+ +IDG+ K  ++  A  +   M +  CKP+ VT+T+LI G C
Sbjct: 509 CFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFC 568

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           + G +  A   F +ML +   P+ +T   LI C  KG
Sbjct: 569 LSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKG 605



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 208/442 (47%), Gaps = 4/442 (0%)

Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNL--VMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           ++ +P++GL+F  ++    +  +    ++   ++R L    L   V+ +   M+S   +P
Sbjct: 40  QIHDPEMGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMP 99

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQF-RPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
                   +S     G  D A      F +        F  NSLLN LVK    + A  +
Sbjct: 100 TREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKV 159

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           + E      + D +T  I+++GL + G+V+  ++        GC P+IV YNTLI G C+
Sbjct: 160 YDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCK 219

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             +  R + L KE+K K  F P V TY ++I+G+CK GK +    +  EM+  G+  S  
Sbjct: 220 KGDTERANVLFKELKMKG-FLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIH 278

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            +N +ID   K G  + A      M+  G  PD+ T++ LI G C  G++++  +L ++ 
Sbjct: 279 IYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQA 338

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             + L PN  ++T LI+  CK+     A   L ++      P    Y  +I G   AG V
Sbjct: 339 IKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEV 398

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           D A  +  +M EK   PD   + +L+ G C KGR+  A  +  +ML    APD     +L
Sbjct: 399 DVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATL 458

Query: 549 ISCLLKGGMPNEAFRIMQRASE 570
           +   ++ G   EA ++ +   E
Sbjct: 459 VDGFIRHGDFEEAKKLFELTIE 480



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 166/335 (49%), Gaps = 5/335 (1%)

Query: 242 ADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
            D A+  ++ + +++   PD ++ N L+  L + G+V+ A + + +M       D  T  
Sbjct: 117 VDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVC 176

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            ++ GLC+  +V  G +L+ E ++     P++V Y ++I GYCK G  ++A  ++ E+  
Sbjct: 177 IMVKGLCKEGKVEDGWKLI-EKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKM 235

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G  P+  T+  +I+GF K G     + +   M   G    +  ++++ID   ++G   +
Sbjct: 236 KGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIE 295

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
                  M      P++ T+ ILI   C    ++ A + L+Q     L+P    Y P+I 
Sbjct: 296 AADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIH 355

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            +CK G    A  ++ +M E+  KPD VT+  LI G  + G +  A+++ NKM+  G  P
Sbjct: 356 NYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLP 415

Query: 541 DDITVNSLISCLLKGG-MPNEAFRIMQRASEDQNL 574
           D    N L+S L K G +P  A +++     DQN+
Sbjct: 416 DANIYNVLMSGLCKKGRLP--AAKVLLAEMLDQNV 448



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 188/432 (43%), Gaps = 15/432 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++ + C+ G +     +   M   GH P+       +   I AG+ D A  + ++ 
Sbjct: 349 SYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKM 408

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V     +YN L++ L K+     A  +  E       PD +    L+ G  R G+ 
Sbjct: 409 VEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDF 468

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F      G  P +V YN +I G C+   +       K +  +   SPD  TY++
Sbjct: 469 EEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRM-IQGLHSPDEFTYST 527

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GY K+  +  A  ++  M     KP+ VT+ +LI+GF   G++  AE   ++MLS  
Sbjct: 528 IIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLR 587

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT++ LI  +C+   L +     ++M  +   PN  T+  L+N L        + 
Sbjct: 588 LKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISN 647

Query: 458 RFLKQLKWNDLVPKPF-------------MYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +  +Q + N LV + F              YN ++   C+   V  A  +  +M  K   
Sbjct: 648 QRSEQTE-NSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFL 706

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           PD V+   L+ G C++GR  +  ++ +  L        +  +  +   L  G  +EA  I
Sbjct: 707 PDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLI 766

Query: 565 MQRASEDQNLQL 576
           +   ++  +LQ+
Sbjct: 767 LHSLADQFSLQM 778


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 226/508 (44%), Gaps = 49/508 (9%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKL-------------GLKFLEFSRVNLSLNHSFK 157
           D+  R+     +P     ++KRL +PKL              L   +            +
Sbjct: 31  DSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIR 90

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++ +L E    D  +  F Y  + G  PN       +    R  + D AK LL+  
Sbjct: 91  SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 150

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +   F Y +L+N+L K     +A+ +F E       PD   +NILI G  + G++
Sbjct: 151 WGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDI 210

Query: 278 KKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             A E +  +       P+I +YN +I+GLC+  +     E+   +K K+E   D+ TY+
Sbjct: 211 LNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK-KNERGQDLYTYS 269

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G C  G +D AT +Y EM   G+ P  V +N +++G+ + G +     + + M   
Sbjct: 270 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 329

Query: 397 G----------------------------YLP------DVVTFSSLIDGYCRNGQLNQGL 422
           G                             LP      D +T+  L+ G C+NG LN+ L
Sbjct: 330 GCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 389

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +E +      + + ++ +IN LC+E RL++    L Q+  +   P P++ N VI+GF
Sbjct: 390 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGF 449

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            +A  +++A      M  K C P  VT+  LI G     R  EA ++  +ML+ G  P+ 
Sbjct: 450 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNM 509

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
           IT + L++ L +G   + A  +  +A E
Sbjct: 510 ITYSLLMNGLCQGKKLDMALNLWCQALE 537



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 196/398 (49%), Gaps = 6/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++  LC+ G  D    ++  M+ +    +       +     +G  D A  +  + 
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+    +YN++LN  ++    +E + ++K   +   +    ++NILI+GL    +V
Sbjct: 292 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKV 350

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   +  +    C  D +TY  L+ GLC+   + +   +L+E +       D   Y+S
Sbjct: 351 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE-NGRGDLDTFAYSS 409

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C+ G++D+  G+ ++M   G KP+    N +I+GF +   +  A      M+S G
Sbjct: 410 MINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKG 469

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT+++LI+G  +  + ++   L  EM  K   PN+ T+++L+N LC+  +L+ A 
Sbjct: 470 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMAL 529

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q       P   M+N +I G C +G V++A  + +EM+++ C P+ VT   L+ G 
Sbjct: 530 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGF 589

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD----DITVNSLISC 551
                   A  I++ +L+ G  PD    +IT+  L SC
Sbjct: 590 YKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSC 627



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 216/459 (47%), Gaps = 40/459 (8%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FL F  + LS N   +TYN++++  C     D  + + ++M   G  P+       ++S 
Sbjct: 112 FLYFETMGLSPN--LQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSL 169

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPD 260
            + G    A  L  +     VT     YN L++   K+ +   A  +++   +  S  P+
Sbjct: 170 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPN 229

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             ++N++I GL + G+  ++FE ++ M       D+ TY+TLI GLC    +     + K
Sbjct: 230 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 289

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF--- 377
           E+  ++  SPDVV Y ++++GY + G++++   ++  M   G + + V++N+LI G    
Sbjct: 290 EMA-ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFEN 347

Query: 378 GKVGNMVSA-EYMRER-----MLSFGYLP--------------------------DVVTF 405
            KV   +S  E + E+      +++G L                           D   +
Sbjct: 348 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 407

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           SS+I+G CR G+L++   + D+M      PN Y    +IN   + ++L DA RF   +  
Sbjct: 408 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVS 467

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    YN +I+G  KA    EA  +V EM +K  KP+ +T+++L+ G C   ++  
Sbjct: 468 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDM 527

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           A++++ + L  G  PD    N +I  L   G   +A ++
Sbjct: 528 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 566



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 208/456 (45%), Gaps = 12/456 (2%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGL-------KFLEFSRVNLSLNHSFKTY---NLVMRSLCE 168
           + LSP   ++++K   NP   L       +F  +S      +H  K      LV  +  +
Sbjct: 6   KSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAK 65

Query: 169 MGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
             + D    +F  M    G  P        +++ I + K D A+     F    ++ +  
Sbjct: 66  NSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQ 125

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            YN L+    ++   D+A  +    +     PD +++  LI  L++ G +  A + F +M
Sbjct: 126 TYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 185

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G +PD+  YN LI G  +  ++    E+ + +       P++ +Y  +I+G CK GK
Sbjct: 186 PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 245

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            D++  I++ M          T++ LI G    GN+  A  + + M   G  PDVV +++
Sbjct: 246 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 305

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           +++GY R G++ + L+L   M+ K     V ++ ILI  L +  ++++A    + L   D
Sbjct: 306 MLNGYLRAGRIEECLELWKVME-KEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKD 364

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
                  Y  ++ G CK G +++A  I+ E E  R   D   ++ +I G C +GR+ E  
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 424

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            + ++M + GC P+    N++I+  ++     +A R
Sbjct: 425 GVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALR 460



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 193/402 (48%), Gaps = 4/402 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC  G  D    V+  M  +G  P+  +    ++  +RAG+ +    L  + 
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KV 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E   +   YN L+  L +    DEA+ +++         D+ T+ +L+ GL + G +
Sbjct: 326 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 385

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA     +  +     D   Y+++I+GLCR   +     +L ++  K    P+     +
Sbjct: 386 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT-KHGCKPNPYVCNA 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+ +  K++ A   +  M S G  P+ VT+N LI+G  K      A  + + ML  G
Sbjct: 445 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P+++T+S L++G C+  +L+  L L  +   K   P+V    I+I+ LC   ++ DA 
Sbjct: 505 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 564

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++K  + VP    +N +++GF K  + + A+ I   + +   +PD +++ I + G 
Sbjct: 565 QLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGL 624

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS--CLLKGGM 557
           C   R+ +A+   N  +  G  P  IT N L+     LKG M
Sbjct: 625 CSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYM 666



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 168/342 (49%), Gaps = 1/342 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++R L E    D    +++ +       +S      V    + G  + A  +L + 
Sbjct: 336 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 395

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G   + TF Y+S++N L ++   DE   +  +  +   +P+ +  N +I G  R  ++
Sbjct: 396 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKL 455

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A  FF +M S GC P +VTYNTLI+GL +    +  + L+KE+  +  + P+++TY+ 
Sbjct: 456 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM-LQKGWKPNMITYSL 514

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C+  K+D A  ++ +    G KP     N++I G    G +  A  +   M    
Sbjct: 515 LMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRN 574

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P++VT ++L++G+ +     +  K+ D +    L P++ ++ I +  LC  +R++DA 
Sbjct: 575 CVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAV 634

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
            FL       ++P    +N ++ G+       E   + A M+
Sbjct: 635 GFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASMK 676


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 197/381 (51%), Gaps = 3/381 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV-SSCIRAGKCDAAKGLLSQ 216
           T + ++R LC  G   +   V D M     +P+       + ++C R+G   A K LL +
Sbjct: 162 TCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK-LLDE 220

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R    T     YN ++N + ++   D+A+   K       +P+T ++NI+++GL     
Sbjct: 221 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A E   +MG  GC P++VT+N LIS LCR   V    E+L+++  K   SP+ ++Y 
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP-KYGCSPNSLSYN 339

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++  +CK  KMDKA    + M S G  P  V++N L+    + G +  A  +  ++   
Sbjct: 340 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 399

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P +++++++IDG  + G+  + L+L +EM  K L P++ T++ +   LC+E+R+ DA
Sbjct: 400 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 459

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R   +++   + P   +YN +I G CK      A  + A M    C P++ T+TILI G
Sbjct: 460 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 519

Query: 517 HCMKGRMVEAISIFNKMLRIG 537
              +G + EA  + +++   G
Sbjct: 520 LAYEGLIKEARDLLDELCSRG 540



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 186/376 (49%), Gaps = 23/376 (6%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG+ DAA+   ++     V    +  ++L+  L  +     A+ +  E  R    PD  T
Sbjct: 141 AGQVDAARRWCAER---AVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVT 197

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV- 322
           + IL++   +    K+A +   +M   GC+PDIVTYN +++G+C+   V    E LK + 
Sbjct: 198 YTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLP 257

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
            +  E  P+ V+Y  V+ G C   + + A  +  EM   G  P+ VTFN+LI    + G 
Sbjct: 258 SYGCE--PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 315

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  + E++  +G  P+ ++++ L+  +C+  ++++ +   D M  +   P++ ++  
Sbjct: 316 VEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 375

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L+ ALC+   ++ A   L QLK     P    YN VIDG  KAG   EA  ++ EM  K 
Sbjct: 376 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 435

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK-------- 554
            +PD +T++ +  G C + R+ +AI  F K+  +G  P+ +  N++I  L K        
Sbjct: 436 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 495

Query: 555 ---------GGMPNEA 561
                    G MPNE+
Sbjct: 496 DLFAYMIGNGCMPNES 511



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 198/418 (47%), Gaps = 4/418 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV  +       YN +M   C  G  D+ +    +        ++   +  +     
Sbjct: 116 EARRVLAACGPDVMAYNAMMAGYCGAGQVDAAR---RWCAERAVERDAYTCDTLIRGLCG 172

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G+   A  +L +            Y  LL A  K++   +A+ +  E       PD  T
Sbjct: 173 RGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVT 232

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N+++ G+ + G V  A EF  ++ S+GC P+ V+YN ++ GLC         EL+ E+ 
Sbjct: 233 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 292

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    P+VVT+  +IS  C+ G ++ A  +  ++   G  P+++++N L+  F K   M
Sbjct: 293 QKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKM 351

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A    + M+S G  PD+V++++L+   CR+G+++  ++L  ++K K  +P + ++  +
Sbjct: 352 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 411

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ L K  +  +A   L ++    L P    Y+ +  G C+   +++A     ++++   
Sbjct: 412 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 471

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +P+ V +  +I+G C +     AI +F  M+  GC P++ T   LI  L   G+  EA
Sbjct: 472 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 196/409 (47%), Gaps = 15/409 (3%)

Query: 163 MRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +RSL   G L +++++V    R     P++      +     +G+   A+ +L+   P  
Sbjct: 74  LRSLVRRGELDEALRLVGSARR-----PDAGTCAALIKKLSASGRTAEARRVLAACGP-- 126

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
                  YN+++         D A     E      + D +T + LI+GL   G    A 
Sbjct: 127 ---DVMAYNAMMAGYCGAGQVDAARRWCAER---AVERDAYTCDTLIRGLCGRGRTANAL 180

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M    C PD+VTY  L+   C+ +   +  +LL E++ K   +PD+VTY  V++G
Sbjct: 181 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNG 239

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C+ G++D A      + S G +P+ V++N+++ G         AE +   M   G  P+
Sbjct: 240 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 299

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VVTF+ LI   CR G +   L++ +++     SPN  ++  L++A CK+ +++ A  FL 
Sbjct: 300 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLD 359

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +      P    YN ++   C++G VD A  ++ ++++K C P  +++  +I G    G
Sbjct: 360 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  EA+ + N+M+  G  PD IT +++ + L +     +A R   +  +
Sbjct: 420 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 468



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++ +LC  G  D    +   ++  G  P        +    +AGK   A  LL++ 
Sbjct: 372 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 431

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+++   L +++  ++A+  F +   +  +P+T  +N +I GL +  E 
Sbjct: 432 VSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 491

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
             A + F  M   GC P+  TY  LI GL     +    +LL E+  + E
Sbjct: 492 HSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGE 541


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 197/411 (47%), Gaps = 2/411 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ + C++ L    +     MR  G  P++      +    RAG   AA GL  Q 
Sbjct: 92  TYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQM 151

Query: 218 -RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R        + Y  L+  L      D+A  +F +  R + +P   T+ +L+ GL ++  
Sbjct: 152 PRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRR 211

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A     +M + G  P++VTYN LI GLC+        +LL++++ +   SPD  TYT
Sbjct: 212 VGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRH-SPDCWTYT 270

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            V+ G CK GK+     + +E    G+    +T+N LI+G+ K G+M +A  + + M   
Sbjct: 271 QVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRN 330

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P V TF+ +I G+C  G++++ +    +M G  LSPN  TF  LI+  C       A
Sbjct: 331 RVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIA 390

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R L  ++   ++P    Y   ID  C  G ++EA+ + + +  K  K   V +T L+ G
Sbjct: 391 LRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHG 450

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +C  G +  A  +  KM    C PD  T N+LI  L K    + A  ++ +
Sbjct: 451 YCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDK 501



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 183/397 (46%), Gaps = 2/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM-RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN +M  LC  GL  +   +F  M R  G   +       +     AG+ D A  + ++
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G        Y  LL+ L K     EA  +  E       P+  T+N LI GL + G 
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
                +    M     SPD  TY  ++ GLC+  +V  G ++L E   K   + +V+TY 
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKG-VALEVLTYN 305

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I+GYCK G M  A  +   M    + P   TFN +I GF   G +  A     +M   
Sbjct: 306 ALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGA 365

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+ VTF+SLI G C  G+    L+L D M+   + P+  T+ I I+ALC E +L +A
Sbjct: 366 GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEA 425

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                 L    +     +Y  ++ G+C+ G++D A  ++ +M  + C PD  T+  LI G
Sbjct: 426 HSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDG 485

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
            C   R+  AI + +KM + G  P   T N LI  +L
Sbjct: 486 LCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQML 522



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 188/393 (47%), Gaps = 1/393 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y ++++ LC  G  D    VF  M      P        +    +  +   A+ LL + 
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN+L+  L ++   D+   + ++       PD WT+  ++ GL + G+V
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               +  ++    G + +++TYN LI+G C+  ++    ++L+ +K ++  +P V T+  
Sbjct: 283 GHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMK-RNRVNPGVQTFNE 341

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G+C  GK+ KA     +M   G+ P+ VTFN LI G   VG    A  + + M  +G
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD  T++  ID  C  GQL +   L   +  K +  +   +T L++  C+   ++ A 
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             ++++   + +P    YN +IDG CK   +D A  ++ +M+++  +P   TF ILI   
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
               +  +A  ++ +M+  GC PD  T    IS
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTYTLKIS 554



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 191/405 (47%), Gaps = 3/405 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +  +  TYN ++  LC+ G  D V  + + M    H P+       V    + GK 
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
                +L +     V +    YN+L+N   K  +   A+ + +   R    P   TFN +
Sbjct: 283 GHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEV 342

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G    G+V KA  F   M   G SP+ VT+N+LISG C V E      LL ++  +  
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLL-DLMEEYG 401

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD  TY   I   C  G++++A  +++ +   GIK   V +  L+ G+ +VG++ SA 
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E+M S   +PDV T+++LIDG C+  +L++ + L D+MK + + P   TF ILI  +
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVI--DGFCKAGNVDEANVIVAEMEEKRCKP 505
             + +  DA +  +Q+  +   P    Y   I  D F  A   +  ++ V EM E    P
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFP 581

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           D  T+  +I  +   G   +A     KML +   PD  T + L++
Sbjct: 582 DVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN 626



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 184/395 (46%), Gaps = 3/395 (0%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           F  M   G  PN       +++  +      A+  L + R   +   TF YN L+  L +
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 239 QNNADEAVYMFKEYFRLYSQP-DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
                 A  +F +  R +    D +++ ILI+GL   G +  A   F  M    C P + 
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY  L+ GLC+V  V     LL E+  K    P+VVTY ++I G C+ G+ D  T +  +
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKG-VVPNVVTYNALIGGLCQEGRFDDVTKLLEK 256

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M      P   T+  ++ G  K G +     +    +  G   +V+T+++LI+GYC+ G 
Sbjct: 257 MEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGD 316

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +   L +   MK   ++P V TF  +I+  C   +++ A  FL Q+    L P    +N 
Sbjct: 317 MKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNS 376

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I G C  G    A  ++  MEE    PD+ T+ I I   C +G++ EA S+F+ +   G
Sbjct: 377 LISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKG 436

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQR-ASED 571
               ++   SL+    + G  + AF +M++ ASE+
Sbjct: 437 IKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN 471



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 157/334 (47%), Gaps = 35/334 (10%)

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS--------------------------- 304
           SR   +      F  M   G  P+  TYNTLI+                           
Sbjct: 66  SRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDT 125

Query: 305 --------GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
                   GLCR   +A    L  ++  +     D  +YT +I G C  G++D A  ++ 
Sbjct: 126 FTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFA 185

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M+    +P   T+ VL+DG  KV  +  AE +   M++ G +P+VVT+++LI G C+ G
Sbjct: 186 KMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEG 245

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           + +   KL ++M+ +  SP+ +T+T +++ LCK  ++    + L +     +  +   YN
Sbjct: 246 RFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYN 305

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I+G+CK G++  A  ++  M+  R  P   TF  +I G C  G++ +A++   +M   
Sbjct: 306 ALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGA 365

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G +P+ +T NSLIS     G    A R++    E
Sbjct: 366 GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 179/432 (41%), Gaps = 33/432 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++   C +G       + D M   G LP+      F+ +    G+ + A  L S  
Sbjct: 373 TFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCL 432

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     +Y SL++   +  + D A  + ++       PD  T+N LI GL ++  +
Sbjct: 433 PMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRL 492

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +    M   G  P   T+N LI  +    + A   ++ +++   S   PD  TYT 
Sbjct: 493 DRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM-ISSGCKPDKQTYTL 551

Query: 338 VIS-----GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            IS     G  K   +D A     EM+  G+ P   T+N +I  +   G    A +   +
Sbjct: 552 KISTDWFEGATKEENIDMAV---VEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVK 608

Query: 393 MLSFGYLPDVVTFSSLIDGYC-------------------RNGQLNQGLKLCDEMKGKNL 433
           MLS    PD  T+S L++  C                   RN Q     +L ++M   + 
Sbjct: 609 MLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQ-----ELFEQMCESDA 663

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P + T+  L+  LC + RL +    L +++ N ++    M + ++  +C      EA  
Sbjct: 664 APGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACE 723

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
               M  +  +P   +  +L+ G C  G    A+SIF+ ML +G   D++    LI CL 
Sbjct: 724 QFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLH 783

Query: 554 KGGMPNEAFRIM 565
           + G       ++
Sbjct: 784 EKGHAGACLEML 795



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/348 (21%), Positives = 124/348 (35%), Gaps = 56/348 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAKG---- 212
           TYN ++  LC++   D    + D M+  G  P +      +   +   K  DAAK     
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           + S  +P + T +  +         K+ N D AV    E       PD  T+N +I+   
Sbjct: 538 ISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVF---PDVETYNAIIKAYV 594

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV-------------ARGHELL 319
             G  +KAF     M S    PD  TY+ L++ +C  ++               R  + L
Sbjct: 595 DAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQEL 654

Query: 320 KEVKFKSEFSPDVVTYTSVISG-----------------------------------YCK 344
            E   +S+ +P + TY +++ G                                   YC 
Sbjct: 655 FEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCN 714

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           L    +A   +  M     +P   +  +L+ G    G+   A  +   ML  GY  D V 
Sbjct: 715 LEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVV 774

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           +  LID     G     L++   M  K    +  T+  L+  + + N 
Sbjct: 775 WKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAELNE 822


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 206/435 (47%), Gaps = 27/435 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++  LC     +    +   M+  G  P+  ++   +  C  + + D  + +  + 
Sbjct: 300 VYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYC--SEEVDIYRLIEERL 357

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVY--------------------MFKEYFRLYS 257
              +      +YNS+LN LV   + D+A Y                    M KE  R   
Sbjct: 358 EDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVR--- 414

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P T +F+I+I GL   G++  A   F DM   GC  +++ YN LI  L   N +   + 
Sbjct: 415 -PXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYL 473

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           LLKE+K  S F P   T+ S+    C+   +  A  +  EM   G +P    + +L+   
Sbjct: 474 LLKEMK-GSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQL 532

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K      A      M+  G+LPD+V +S+ IDG+ +   ++Q L++  ++  +   P+V
Sbjct: 533 CKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDV 592

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
             +  LIN  CK  R+++A   L ++    LVP    YN +IDG+CK G++D+A   ++ 
Sbjct: 593 VAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSR 652

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K  +P+ +T+T LI G C  GR  +AI ++N+M   GC+P+ I+  +LI  L K G 
Sbjct: 653 MVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGW 712

Query: 558 PNEAFRIMQRASEDQ 572
           P+ A    +   E +
Sbjct: 713 PDAALLYFREMGERE 727



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 172/376 (45%), Gaps = 2/376 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D+ +V   +M  +   P +      +      GK D A  L           +  +YN+L
Sbjct: 399 DNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNL 458

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++ L   N  +E   + KE      +P  +T N +   L R  +V  A +   +M   G 
Sbjct: 459 IDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGH 518

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P I  Y  L+  LC+    A     L E+  +  F PD+V Y++ I G+ K+  +D+A 
Sbjct: 519 EPWIKHYTLLVKQLCKRKRSAEACNFLAEM-VREGFLPDIVAYSAAIDGFVKIKAVDQAL 577

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            I+ ++ + G  P  V +N LI+GF KV  +  A  + + M++ G +P VVT++ LIDG+
Sbjct: 578 EIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGW 637

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+NG ++Q       M GK   PNV T+T LI+ LC   R +DA     +++     P  
Sbjct: 638 CKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNR 697

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             +  +I G CK G  D A +   EM E+   PD + +  LI           A  I  +
Sbjct: 698 ISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFISNKNPTLAFEILKE 756

Query: 533 MLRIGCAPDDITVNSL 548
           M+  G  PD +  N L
Sbjct: 757 MVAKGKFPDPLDKNDL 772



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 176/349 (50%), Gaps = 2/349 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++++V+  LC  G  D    +F  M   G   N  +    +     + + +    LL + 
Sbjct: 419 SFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM 478

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      + F +NS+   L ++ +   A+ M +E      +P    + +L++ L +    
Sbjct: 479 KGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRS 538

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A  F  +M   G  PDIV Y+  I G  ++  V +  E+ +++  +  + PDVV Y +
Sbjct: 539 AEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARG-YCPDVVAYNT 597

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+CK+ ++ +A  I +EM + G+ PS VT+N+LIDG+ K G++  A +   RM+   
Sbjct: 598 LINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKE 657

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V+T+++LIDG C  G+ +  + L +EM+GK  SPN  +F  LI+ LCK    + A 
Sbjct: 658 REPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAAL 717

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            + +++   +  P   +Y  +I  F    N   A  I+ EM  K   PD
Sbjct: 718 LYFREMGERE-TPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPD 765



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/554 (22%), Positives = 208/554 (37%), Gaps = 117/554 (21%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNL--------------------VMRSLCE 168
           V+  L + K+  +F  ++      NH+  TYN                     ++ S C 
Sbjct: 101 VLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCA 160

Query: 169 M-----------GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           M           G  D V++    M   G  P+   +   + +   + K D A  + ++ 
Sbjct: 161 MSPGALGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEI 220

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G   +   + + L+    K    D+A  + +    L  + +  TF +LI G  R   V
Sbjct: 221 Y-GRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRV 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV----- 332
            KA + F  M   G +PD+  Y+ LI GLC   E+ +   LL E+K +    PD+     
Sbjct: 280 DKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMK-ELGIDPDIQILSK 338

Query: 333 ----------------------------VTYTSVISGYCKLGKMDKATGIYNEMNSCG-- 362
                                       + Y SV++G      +DKA  +   M      
Sbjct: 339 LIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYT 398

Query: 363 --------------IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
                         ++P   +F+++IDG    G +  A  +   M+  G   +V+ +++L
Sbjct: 399 DNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNL 458

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT----------------------------- 439
           ID    + +L +   L  EMKG    P  +T                             
Sbjct: 459 IDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGH 518

Query: 440 ------FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
                 +T+L+  LCK  R  +A  FL ++     +P    Y+  IDGF K   VD+A  
Sbjct: 519 EPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALE 578

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           I  ++  +   PD V +  LI G C   R+ EA  I ++M+  G  P  +T N LI    
Sbjct: 579 IFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWC 638

Query: 554 KGGMPNEAFRIMQR 567
           K G  ++AF  + R
Sbjct: 639 KNGDIDQAFHCLSR 652



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 16/166 (9%)

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK-WNDLVPKPFMYNPVID----G 481
           EM      P+ YT T ++ A C      ++R+F K L  +N++  + ++   V+      
Sbjct: 184 EMCDSGWEPDKYTLTSVLQAYC------NSRKFDKALSVFNEIYGRGWVDGHVLSILVLT 237

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           F K G VD+A  ++  ME+   + ++ TF +LI G   + R+ +A+ +F KM + G APD
Sbjct: 238 FSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPD 297

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE---DQNLQLPSWKKAVP 584
               ++LI  L       +A  ++    E   D ++Q+ S  K +P
Sbjct: 298 VSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILS--KLIP 341



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 83/225 (36%), Gaps = 45/225 (20%)

Query: 111 DTCARYLCEKLSPLNSLE----VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL 166
           D CAR  C  +   N+L      +KR+      L  +    V   L  S  TYNL++   
Sbjct: 582 DICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEM----VAKGLVPSVVTYNLLIDGW 637

Query: 167 CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           C                                   + G  D A   LS+    E   + 
Sbjct: 638 C-----------------------------------KNGDIDQAFHCLSRMVGKEREPNV 662

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
             Y +L++ L      D+A++++ E       P+  +F  LI GL + G    A  +F +
Sbjct: 663 ITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFRE 722

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           MG    +PD + Y  LI+            E+LKE+  K +F PD
Sbjct: 723 MGERE-TPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKF-PD 765


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 178/343 (51%), Gaps = 1/343 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +  +L  L K  +   A+ + K+      +P+  T NILI     +G++  +F     + 
Sbjct: 55  FGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKIL 114

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P+ +T  TL+ GLC   EV +      +V  +  F  + V+Y ++++G CK+G+ 
Sbjct: 115 KLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG-FQMNQVSYGTLLNGLCKIGET 173

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A      +       + V +N +IDG  K   +  A      M + G  P+V+T+++L
Sbjct: 174 RCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTL 233

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G+C  GQL     L +EM  KN++PNVYT+ ILI+ALCKE ++ +A+  L ++ +   
Sbjct: 234 IGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQ 293

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                 Y  ++DGFCK  N+D+A  +  +M+E   +P+K T+T LI G C  GR+ +A  
Sbjct: 294 PADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQK 353

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +F  +L  GC  D  T N +I  L K GM +EA  I  +  ++
Sbjct: 354 LFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDN 396



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 181/358 (50%), Gaps = 11/358 (3%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ----- 216
           ++  L +M  + +   +   M   G  PN   +   ++     G+   +  +L +     
Sbjct: 58  ILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLG 117

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           ++P  +T++T M       L  +    ++V+   +      Q +  ++  L+ GL +IGE
Sbjct: 118 YQPNTITLTTLM-----KGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGE 172

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A +F   +       ++V YNT+I GLC+   V   ++   E+  +  F P+V+TYT
Sbjct: 173 TRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIF-PNVITYT 231

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+C  G++  A  + NEM    I P+  T+ +LID   K G +  A+ +   M   
Sbjct: 232 TLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYR 291

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   DVVT++SL+DG+C+N  L++   L  +MK   + PN YT+T LI+ LCK  RL DA
Sbjct: 292 GQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDA 351

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           ++  + L           YN +I G CK G +DEA  I ++ME+  C P+ VTF I+I
Sbjct: 352 QKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIII 409



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 192/391 (49%), Gaps = 5/391 (1%)

Query: 179 FDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
           F+ M    H P  P++EF   +    +      A  L  Q     +  +    N L+N  
Sbjct: 40  FNGMLLMHHTP--PIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCF 97

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
                   +  +  +  +L  QP+T T   L++GL   GEV+K+  F   + + G   + 
Sbjct: 98  CHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQ 157

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           V+Y TL++GLC++ E     + L+ ++  S    +VV Y ++I G CK   +++A   Y+
Sbjct: 158 VSYGTLLNGLCKIGETRCAIKFLRMIE-DSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYS 216

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EMN+ GI P+ +T+  LI GF   G +  A  +   M+     P+V T++ LID  C+ G
Sbjct: 217 EMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEG 276

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++ +   L  EM  +    +V T+T L++  CK   L+ A     ++K   + P  + Y 
Sbjct: 277 KVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYT 336

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +IDG CK G + +A  +  ++  K C  D  T+ ++I G C +G + EA++I +KM   
Sbjct: 337 ALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDN 396

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           GC P+ +T   +I  L K    ++A +++  
Sbjct: 397 GCIPNVVTFEIIIRSLFKKDENDKAEKLLHE 427



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 1/306 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T   +M+ LC  G         D + + G   N       ++   + G+   A   L   
Sbjct: 124 TLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMI 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++  MYN++++ L K    +EA   + E       P+  T+  LI G    G++
Sbjct: 184 EDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQL 243

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AF    +M     +P++ TY  LI  LC+  +V     LL E+ ++ +   DVVTYTS
Sbjct: 244 TGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQ-PADVVTYTS 302

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+CK   +DKAT ++ +M   GI+P+  T+  LIDG  K G +  A+ + + +L  G
Sbjct: 303 LLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKG 362

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              DV T++ +I G C+ G L++ L +  +M+     PNV TF I+I +L K++  + A 
Sbjct: 363 CCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAE 422

Query: 458 RFLKQL 463
           + L ++
Sbjct: 423 KLLHEM 428



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 162/344 (47%), Gaps = 1/344 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++   C +G       V   +   G+ PN+  +   +      G+   +     + 
Sbjct: 89  TLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKV 148

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 M+   Y +LLN L K      A+   +      +  +   +N +I GL +   V
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLV 208

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++F+ +M + G  P+++TY TLI G C   ++     LL E+  K+  +P+V TY  
Sbjct: 209 NEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKN-INPNVYTYAI 267

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK GK+ +A  +  EM+  G     VT+  L+DGF K  N+  A  +  +M  +G
Sbjct: 268 LIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWG 327

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+  T+++LIDG C+ G+L    KL  ++  K    +V T+ ++I  LCKE  L++A 
Sbjct: 328 IQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEAL 387

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
               +++ N  +P    +  +I    K    D+A  ++ EM  K
Sbjct: 388 AIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAK 431



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 1/241 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+  L +     +  M + G  PN       +     AG+   A  LL++  
Sbjct: 195 YNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMI 254

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + Y  L++AL K+    EA  +  E        D  T+  L+ G  +   + 
Sbjct: 255 LKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLD 314

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA   F  M  +G  P+  TY  LI GLC+   +    +L +++  K     DV TY  +
Sbjct: 315 KATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKG-CCIDVCTYNVM 373

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G +D+A  I ++M   G  P+ VTF ++I    K      AE +   M++ G 
Sbjct: 374 IGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433

Query: 399 L 399
           L
Sbjct: 434 L 434



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 100/249 (40%), Gaps = 35/249 (14%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A   +N M      P  V F  ++    K+ +  +A  + ++M   G  P++VT + 
Sbjct: 33  VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+ +C  GQ++    +  ++      PN  T T L+  LC +  +  +  F  ++    
Sbjct: 93  LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152

Query: 468 LVPKPFMYNPVIDGFCKAGN-----------------------------------VDEAN 492
                  Y  +++G CK G                                    V+EA 
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              +EM  +   P+ +T+T LI G C+ G++  A S+ N+M+     P+  T   LI  L
Sbjct: 213 DFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDAL 272

Query: 553 LKGGMPNEA 561
            K G   EA
Sbjct: 273 CKEGKVKEA 281



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 1/143 (0%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P +  F  ++  L K    + A    KQ++   + P     N +I+ FC  G +  +  
Sbjct: 49  TPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFS 108

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ ++ +   +P+ +T T L+ G C+KG + +++   +K++  G   + ++  +L++ L 
Sbjct: 109 VLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLC 168

Query: 554 KGGMPNEAFRIMQRASEDQNLQL 576
           K G    A + + R  ED +  L
Sbjct: 169 KIGETRCAIKFL-RMIEDSSTGL 190


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 209/413 (50%), Gaps = 14/413 (3%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSD--GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           ++R L ++G  D     F  +R+      P+ P+    + S +R  +      L S    
Sbjct: 84  MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLA 143

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             V   T+ +N L+++L +    D A+ +F++  +    P+ +T  IL++GL R G VK+
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQ 203

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRV---NEVARGHELLKEVKFKSEFSPDVVTYT 336
           A E   +  S   +  +V YNTL+S  CR    NE  R  E + E+       PDVVT+ 
Sbjct: 204 ALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLVERMNELGV----LPDVVTFN 258

Query: 337 SVISGYCKLGKMDKATGIYNEMN---SCGI-KPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           S IS  C+ GK+ +A+ I+ +M      G+ +P+ VTFN+++ GF K G M  A  + E 
Sbjct: 259 SRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVET 318

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G    +  ++  + G  RNG+L +   + DEM  K + PN YT+ I+++ LC+ + 
Sbjct: 319 MKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHM 378

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L+DAR  +  +  N + P    Y+ ++ G+C  G V EA  ++ EM    C+P+  T   
Sbjct: 379 LSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNT 438

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           L+     +GR +EA  +  KM      PD +T N +++ L + G  ++A  I+
Sbjct: 439 LLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIV 491



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 210/442 (47%), Gaps = 41/442 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++   C   +++  + + + M   G LP+       +S+  RAGK   A  +    
Sbjct: 221 VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM 280

Query: 218 ---------RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
                    RP  VT     +N +L    K     +A  + +   ++ +      +NI +
Sbjct: 281 QMDAELGLPRPNVVT-----FNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWL 335

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV--ARGHELLKEVKFKS 326
            GL R GE+ +A     +M + G  P+  TYN ++ GLCR + +  ARG   L ++  ++
Sbjct: 336 MGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARG---LMDLMMRN 392

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD V Y++++ GYC  GK+ +A  + +EM   G +P+  T N L+    K G  + A
Sbjct: 393 GVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEA 452

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM---------KGKNLS--- 434
           E M ++M    Y PD VT + +++G CRNG+L++  ++  EM         KG + +   
Sbjct: 453 EEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLI 512

Query: 435 ----------PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
                     P+  T+T LIN LCK  RL +A++   ++   +L P    Y+  I  FCK
Sbjct: 513 NSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCK 572

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G +  A  ++ +ME   C     T+  LI+G     ++ E   + ++M   G +PD  T
Sbjct: 573 QGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICT 632

Query: 545 VNSLISCLLKGGMPNEAFRIMQ 566
            N++I+CL +GG   +A  ++ 
Sbjct: 633 YNNIITCLCEGGKAKDAISLLH 654



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 13/392 (3%)

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAA----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
           H+ +  +I   V    + G  D A    K L +QF    ++ S  +YN LL + ++ +  
Sbjct: 75  HIAHPSLISM-VRVLAQLGHVDDAITHFKSLRAQF--PSLSPSLPLYNLLLRSTLRHHRP 131

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
               +++ +       P T+TFN+LI  L        A + F  M   GC P+  T   L
Sbjct: 132 GFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGIL 191

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + GLCR   V +  EL+      S    + V Y +++S +C+    ++A  +   MN  G
Sbjct: 192 VRGLCRAGLVKQALELVN--NNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELG 249

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL----PDVVTFSSLIDGYCRNGQL 418
           + P  VTFN  I    + G ++ A  +   M     L    P+VVTF+ ++ G+C++G +
Sbjct: 250 VLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMM 309

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
                L + MK      ++  + I +  L +   L +AR  L ++    + P  + YN +
Sbjct: 310 GDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIM 369

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           +DG C+   + +A  ++  M      PD V ++ L+ G+C +G++ EA S+ ++M+R GC
Sbjct: 370 MDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGC 429

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            P+  T N+L+  L K G   EA  ++Q+ +E
Sbjct: 430 QPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNE 461



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 196/401 (48%), Gaps = 22/401 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+NL+++  C+ G+    + + + M+  G+  +      ++   +R G+   A+ +L + 
Sbjct: 295 TFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEM 354

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + + YN +++ L + +   +A  +     R    PDT  ++ L+ G    G+V
Sbjct: 355 VAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKV 414

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A    ++M   GC P+  T NTL+  L +        E+L+++  K  + PD VT   
Sbjct: 415 FEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKC-YQPDTVTCNI 473

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAV----TFNVLIDGFGKVGNMVSAEYMRERM 393
           V++G C+ G++DKA+ I +EM + G  P+++    +F  LI+    V N           
Sbjct: 474 VVNGLCRNGELDKASEIVSEMWTNG--PTSLDKGNSFASLINSIHNVSNC---------- 521

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                LPD +T+++LI+G C+ G+L +  K   EM  KNL P+  T+   I + CK+ ++
Sbjct: 522 -----LPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKI 576

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A R LK ++ N        YN +I G      + E   +  EM+EK   PD  T+  +
Sbjct: 577 SSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNI 636

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           I   C  G+  +AIS+ ++ML  G +P+  +   LI    K
Sbjct: 637 ITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSK 677



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 190/435 (43%), Gaps = 57/435 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++M  LC   +    + + D M  +G  P++      +      GK   AK +L + 
Sbjct: 365 TYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEM 424

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T+  N+LL++L K+    EA  M ++      QPDT T NI++ GL R GE+
Sbjct: 425 IRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGEL 484

Query: 278 KKAFEFFYDMGSFG----------------------CSPDIVTYNTLISGLCRVNEVARG 315
            KA E   +M + G                      C PD +TY TLI+GLC+V  +   
Sbjct: 485 DKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEA 544

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            +   E+  K+   PD VTY + I  +CK GK+  A  +  +M   G   +  T+N LI 
Sbjct: 545 KKKFIEMLAKN-LRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALIL 603

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G G    +     +++ M   G  PD+ T++++I   C  G+    + L  EM  K +SP
Sbjct: 604 GLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISP 663

Query: 436 NVYTFTILINALCKENRLNDA-------------RRFLKQLKWNDLVP------------ 470
           NV +F ILI A  K +    A             +  L  L +N+L+             
Sbjct: 664 NVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFE 723

Query: 471 ---------KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
                    K FMY  +I   C+   + +AN ++ ++ +K    D  +F  +I G   +G
Sbjct: 724 VSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRG 783

Query: 522 RMVEAISIFNKMLRI 536
              +A  +  +M+ +
Sbjct: 784 NKRQADELAKRMMEL 798



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 183/397 (46%), Gaps = 22/397 (5%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S + YN+ +  L   G     ++V D M + G  PN+      +    R      A+GL+
Sbjct: 327 SLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLM 386

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  V   T  Y++LL+    +    EA  +  E  R   QP+T+T N L+  L + 
Sbjct: 387 DLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKE 446

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV------------ 322
           G   +A E    M      PD VT N +++GLCR  E+ +  E++ E+            
Sbjct: 447 GRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGN 506

Query: 323 KFKSEFS---------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
            F S  +         PD +TYT++I+G CK+G++++A   + EM +  ++P +VT++  
Sbjct: 507 SFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTF 566

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I  F K G + SA  + + M   G    + T+++LI G   N Q+ +   L DEMK K +
Sbjct: 567 IWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGI 626

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           SP++ T+  +I  LC+  +  DA   L ++    + P    +  +I  F K+ +   A  
Sbjct: 627 SPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACE 686

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
           +  E+    C   +  ++++       G++ EA  +F
Sbjct: 687 LF-EVALNICGRKEALYSLMFNELLAGGQLSEAKELF 722


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 192/405 (47%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +T N V+R   E G     + VFD M   G  P +      V  C R GK +    LL+ 
Sbjct: 39  ETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAA 98

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 ++       ++ +L ++    +    F+      + P+   +   I GL +   
Sbjct: 99  MWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRY 158

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           VK+AF    +M   G  P++ T+ TLI GLC++    R   L  ++   S + P+V TYT
Sbjct: 159 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 218

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I GYC+ GK+ +A  +   M   G+KP+  T+  LI G  K G+   A  +  +M   
Sbjct: 219 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 278

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+LP++ T++++IDG+C+ G++ +  K+      + L  +  T+TILI   CK+  +  A
Sbjct: 279 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 338

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                ++  N   P    Y  +I  +C+   ++E+     +       P K T+T +I G
Sbjct: 339 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 398

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +C  GR   A+ +F +M++ GC  D IT  +LIS L K     EA
Sbjct: 399 YCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEA 443



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 194/430 (45%), Gaps = 39/430 (9%)

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           R   SL+++  T  +V+RSLCE G    V   F  M   G  PN                
Sbjct: 101 RYGFSLDNA--TCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPN---------------- 142

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
                                 Y + ++ L K+    +A ++ +E      +P+ +T   
Sbjct: 143 -------------------VVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 183

Query: 267 LIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           LI GL +IG  ++AF  F  +  S    P++ TY  +I G CR  ++AR   LL  +  +
Sbjct: 184 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM-VE 242

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               P+  TYT++I G+CK G  D+A  + N+M   G  P+  T+N +IDGF K G +  
Sbjct: 243 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 302

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +     S G   D +T++ LI  +C+ G +   L L D M      P++  +T LI+
Sbjct: 303 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 362

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C++ ++ ++++F  +     L+P    Y  +I G+CK G    A  +   M +  C  
Sbjct: 363 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA 422

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D +T+  LI G C + R+ EA +++  ML     P ++T  +L     +    + A  ++
Sbjct: 423 DSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL 482

Query: 566 QRASEDQNLQ 575
            R  + Q + 
Sbjct: 483 DRLDKRQQVH 492



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 167/348 (47%), Gaps = 2/348 (0%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG+   A  ++ + R   + +     N +L   ++  +   A  +F    R    P    
Sbjct: 16  AGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRG 75

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           F  L+    R G+V++       M  +G S D  T   ++  LC         E  + + 
Sbjct: 76  FGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM- 134

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            ++   P+VV YT+ I G CK   + +A  +  EM   G+KP+  T   LIDG  K+G  
Sbjct: 135 LETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 194

Query: 384 VSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
             A  +  +++ S  Y P+V T++ +I GYCR G+L +   L   M  + L PN  T+T 
Sbjct: 195 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 254

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI   CK    + A   + ++K    +P  + YN VIDGFCK G + EA  ++     + 
Sbjct: 255 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 314

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            K DK+T+TILI  HC +G +  A+ +F++M+  GC PD     SLIS
Sbjct: 315 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 362



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 114/270 (42%), Gaps = 36/270 (13%)

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++ + + G++ +A  +  EM S G+     T N ++    + G+ V A  + + M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P    F +L+   CR G++ +   L   M     S +  T T+++ +LC++ R  D  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM------------------- 498
            F +++      P    Y   IDG CK   V +A  ++ EM                   
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 499 -----------------EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
                            +    KP+  T+T++I G+C +G++  A  +  +M+  G  P+
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASED 571
             T  +LI    KGG  + AF +M +  ++
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQE 278


>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g13040, mitochondrial; Flags: Precursor
 gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
 gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 193/404 (47%), Gaps = 37/404 (9%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
           F+S   +  K D    LLS           + +N  L+ L ++N    AV  F    +  
Sbjct: 85  FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG 144

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            +PD  ++ ILI GL R G+V  A E +  M   G SPD      L+ GLC   +V   +
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           E++ E    +      V Y ++ISG+CK G+++KA  + + M+  G +P  VT+NVL++ 
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264

Query: 377 F----------GKVGNMVSA--------------------------EYMRERMLSFGYLP 400
           +          G +  MV +                           +M + M   G+  
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC- 323

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           DVV++S+LI+ +CR     +  +L +EM+ K +  NV T+T LI A  +E   + A++ L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            Q+    L P    Y  ++D  CK+GNVD+A  +  +M E    PD +++  LI G C  
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           GR+ EAI +F  M    C PD++T   +I  L++G   + A+++
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 199/445 (44%), Gaps = 37/445 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y   + +L + G+ D+   VFD MR   +   S     F+   +R  + + A+ +    
Sbjct: 11  AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +P   ++  F Y+  ++ L K    D    +  +   L   PD W FN+ +  L R  +V
Sbjct: 71  KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F+ M   G  PD+V+Y  LI+GL R  +V    E+   +  +S  SPD     +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM-IRSGVSPDNKACAA 189

Query: 338 VISGYCKLGKMDKATG-IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++ G C   K+D A   +  E+ S  +K S V +N LI GF K G +  AE ++  M   
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQ-----------GLKL--------------------C 425
           G  PD+VT++ L++ Y  N  L +           G++L                    C
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309

Query: 426 DEMKGKNLSP----NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
                K + P    +V +++ LI   C+ +    A R  ++++   +V     Y  +I  
Sbjct: 310 YNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           F + GN   A  ++ +M E    PD++ +T ++   C  G + +A  +FN M+     PD
Sbjct: 370 FLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPD 429

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQ 566
            I+ NSLIS L + G   EA ++ +
Sbjct: 430 AISYNSLISGLCRSGRVTEAIKLFE 454



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 176/367 (47%), Gaps = 12/367 (3%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +Y +++  L   G + D+V++    +RS G  P++      V     A K D A  ++++
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALVVGLCHARKVDLAYEMVAE 209

Query: 217 -FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             +   V +ST +YN+L++   K    ++A  +     ++  +PD  T+N+L+       
Sbjct: 210 EIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNN 269

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP----D 331
            +K+A     +M   G   D  +YN L+   CRV+   + +  + +     E  P    D
Sbjct: 270 MLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK-----EMEPRGFCD 324

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           VV+Y+++I  +C+     KA  ++ EM   G+  + VT+  LI  F + GN   A+ + +
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M   G  PD + +++++D  C++G +++   + ++M    ++P+  ++  LI+ LC+  
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+ +A +  + +K  +  P    +  +I G  +   +  A  +  +M +K    D+    
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504

Query: 512 ILIIGHC 518
            LI   C
Sbjct: 505 TLIKASC 511



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 36/269 (13%)

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           + Y S I+   K G +D A  +++EM     +  +  +N  I    +      AE +   
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G+     T+S  I G C+  + +    L  +M+     P+++ F + ++ LC+EN+
Sbjct: 70  MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129

Query: 453 LNDA-RRFLKQLK-----------------------------WNDLV-----PKPFMYNP 477
           +  A + F   ++                             WN ++     P       
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189

Query: 478 VIDGFCKAGNVDEANVIVA-EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
           ++ G C A  VD A  +VA E++  R K   V +  LI G C  GR+ +A ++ + M +I
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           GC PD +T N L++      M   A  +M
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 1/199 (0%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R  C+ +S    +E   R  N +   +  E  R    +  +  TY  ++++    G    
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK-GMVMNVVTYTSLIKAFLREGNSSV 378

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
            + + D M   G  P+       +    ++G  D A G+ +     E+T     YNSL++
Sbjct: 379 AKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            L +     EA+ +F++       PD  TF  +I GL R  ++  A++ +  M   G + 
Sbjct: 439 GLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL 498

Query: 295 DIVTYNTLISGLCRVNEVA 313
           D    +TLI   C ++  A
Sbjct: 499 DRDVSDTLIKASCSMSADA 517


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 170/314 (54%), Gaps = 1/314 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y+ +++ L K  N +EA+ +F E      QP+  TF++LI  L + G+V KA +    M 
Sbjct: 240 YSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMI 299

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P++ TY +LI G C V ++    EL   +  K  + PDV++Y  +I+GYCK  K+
Sbjct: 300 QIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKG-YEPDVISYNMLINGYCKTLKV 358

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++A  ++NEM   G+ P   T  VL+      G +  A+ +   +  +    D+      
Sbjct: 359 EEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIF 418

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +DG C+NG + + +KL +E++  N+  ++ TF  LI+ LCK  +L  A    ++L    +
Sbjct: 419 LDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGI 478

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y+ +I GFCK G VD+AN++  +MEE  C PD +T++IL+ G     ++ + + 
Sbjct: 479 QPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQ 538

Query: 529 IFNKMLRIGCAPDD 542
           + ++M+     PDD
Sbjct: 539 LLHRMIEKDVWPDD 552



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 187/382 (48%), Gaps = 40/382 (10%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N L+N L   N  +E +       R    PD  TF  LI+GL     + +A + F  M  
Sbjct: 130 NILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQK 189

Query: 290 FGCSPDIVTYNTLISGLC---RVNEVARGH-ELLKEVK-FKSEFSPDVVTYTSVISGYCK 344
            GC+P++VTY TLI GLC    +N   + H E+L +   +     P+V++Y+ +I G CK
Sbjct: 190 LGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCK 249

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +G  ++A  ++NEM   G++P+ VTF+VLID   K G ++ A+ + E M+  G +P++ T
Sbjct: 250 VGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFT 309

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL- 463
           ++SLI G+C  G LN   +L   M  K   P+V ++ +LIN  CK  ++ +A +   ++ 
Sbjct: 310 YTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEML 369

Query: 464 ---KWNDL------------------------VPKPFMYNP-------VIDGFCKAGNVD 489
               W D+                        V KP+            +DG CK G + 
Sbjct: 370 HVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIF 429

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           EA  +  E+E    K D  TF  LI G C  G++  A  +F K+   G  PD +  +S+I
Sbjct: 430 EAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMI 489

Query: 550 SCLLKGGMPNEAFRIMQRASED 571
               K G  ++A  + Q+  E+
Sbjct: 490 HGFCKKGQVDKANILFQKMEEN 511



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 1/327 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y++++  LC++G  +    +F+ M   G  PN       +    + G+   AK LL   
Sbjct: 239 SYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM 298

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + F Y SL+       + + A  +F        +PD  ++N+LI G  +  +V
Sbjct: 299 IQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKV 358

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F +M   G  PD+ T   L+  L    +V    EL + +K       D+     
Sbjct: 359 EEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIK-PYAMPKDLCICCI 417

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            + G CK G + +A  ++NE+ S  +K    TF  LIDG  K G + +A  + E++   G
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD + +SS+I G+C+ GQ+++   L  +M+    SP++ T++IL+    + N+L    
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCK 484
           + L ++   D+ P   +Y  V D  CK
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCK 564



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 162/342 (47%), Gaps = 50/342 (14%)

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A +FF  M        I ++N L++GL ++   ++   L K++     + PD++T  
Sbjct: 77  VTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLW-PDLLTLN 130

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+  C + ++++       +   G  P  VTF  LI G      ++ A  +  RM   
Sbjct: 131 ILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKL 190

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLK-----------------------------LC-- 425
           G  P+VVT+ +LI G C  G +N  LK                             LC  
Sbjct: 191 GCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKV 250

Query: 426 ----------DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
                     +EM  + + PNV TF++LI+ LCKE ++  A++ L+ +    +VP  F Y
Sbjct: 251 GNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTY 310

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
             +I GFC  G+++ A  +   M  K  +PD +++ +LI G+C   ++ EA+ +FN+ML 
Sbjct: 311 TSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLH 370

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
           +G  PD  T   L+  L   G  ++A   FR+++  +  ++L
Sbjct: 371 VGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDL 412



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 148/317 (46%), Gaps = 10/317 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++  LC+ G     + + + M   G +PN       +      G  ++AK L    
Sbjct: 274 TFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM 333

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN L+N   K    +EA+ +F E   +   PD  T  +L++ L   G+V
Sbjct: 334 PSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  +  +    D+      + GLC+   +    +L  E++       D+ T+  
Sbjct: 394 DDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELE-SYNMKLDIETFGC 452

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK GK++ A  ++ ++   GI+P A+ ++ +I GF K G +  A  + ++M   G
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++T+S L+ G+  + +L + ++L   M  K++ P+   + I+ + +CK+ +  +  
Sbjct: 513 CSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKE-- 570

Query: 458 RFLKQLKWNDLVPKPFM 474
                  W DL+ + F+
Sbjct: 571 -------WLDLLQRFFV 580


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 187/362 (51%), Gaps = 1/362 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  +YN ++   C+ G  D    V + +   G  PN+      +    + G C+ A  + 
Sbjct: 465 SLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMF 524

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            Q     +  + + +NS++N L K     EA      + +    P + T+N +I G  + 
Sbjct: 525 DQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKE 584

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +  A   + +M     SP+++TY +LI+G C+ N++    ++  ++K K     D+  
Sbjct: 585 GAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG-LELDITV 643

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I+G+CK+  M+ A   ++++   G+ P+ + +N++I  +  + NM +A  + + M+
Sbjct: 644 YATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMI 703

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +     D+  ++SLIDG  + G+L+  L L  EM  + + P+++ + +LIN LC   +L 
Sbjct: 704 NNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLE 763

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A + LK++  N++ P   +YN +I G  K GN+ EA  +  EM +K   PD  T+ IL+
Sbjct: 764 NAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILV 823

Query: 515 IG 516
            G
Sbjct: 824 NG 825



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 194/396 (48%), Gaps = 1/396 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN+V+  LCE+G  +    ++D M   G  P+       +    + G  D A  ++
Sbjct: 430 SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVM 489

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +      +  +   Y  L+    K+ + + A  MF +       P  +TFN +I GL ++
Sbjct: 490 NGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKV 549

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V +A +           P  +TYN +I G  +   +     + +E+  +SE SP+V+T
Sbjct: 550 GRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREM-CRSEISPNVIT 608

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YTS+I+G+CK  KMD A  ++++M   G++     +  LI GF K+ +M +A     ++L
Sbjct: 609 YTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLL 668

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+ + ++ +I  Y     +   L L  EM    +  ++  +T LI+ L KE +L+
Sbjct: 669 EVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLS 728

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A     ++    +VP  FMYN +I+G C  G ++ A  I+ EM+     P  + +  LI
Sbjct: 729 FALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLI 788

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            GH  +G + EA  + ++ML  G  PDD T + L++
Sbjct: 789 AGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 239/526 (45%), Gaps = 30/526 (5%)

Query: 41  GVGLPMTLLFFTVRPSRVRASTIA-AIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVV 99
           G  L  + +F  +  S VRA+ I  A+  F  +   G  P+              FV V+
Sbjct: 146 GFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPW------------VPFVNVL 193

Query: 100 CTLLLRSSYLSDTCARYLCEKLSPLN------SLEVIKRLDNPKLGLKFLEFSR-----V 148
            T ++R + + D  A  L ++++         +L+V+ R      G KF+E  R      
Sbjct: 194 LTAMIRRNMVED--AHRLFDEMAERRIYGDCYTLQVLMR--ACLKGGKFVEAERYFGQAA 249

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
              L     +Y++V++++C     D    + +     G +P+       + +C+R G   
Sbjct: 250 GRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFG 309

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  L  +     V ++  +  SL+     + + + A+ +F E   +   P+   F++LI
Sbjct: 310 EALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLI 369

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           +  S+IG V+KA E +  M   G  P +   N L+ G  + N +   + LL         
Sbjct: 370 EWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA 429

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           S  VVTY  V+   C+LGK+++A  ++++M   GI PS V++N +I G  K G M  A  
Sbjct: 430 S--VVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHE 487

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   ++  G  P+ +T++ L++G  + G       + D+M    + P  YTF  +IN LC
Sbjct: 488 VMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLC 547

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R+++AR  L        +P    YN +IDG+ K G +D A  +  EM      P+ +
Sbjct: 548 KVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVI 607

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           T+T LI G C   +M  A+ + + M R G   D     +LI+   K
Sbjct: 608 TYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCK 653



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 206/441 (46%), Gaps = 37/441 (8%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +++  C  G  +S   +FD +   G  PN  +    +  C + G  + A  L ++ +   
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMG 392

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +  + F+ N LL    KQN  + A Y+  +           T+NI++  L  +G+V +A 
Sbjct: 393 LQPTVFILNFLLKGFRKQNLLENA-YLLLDGAVENGIASVVTYNIVLLWLCELGKVNEAC 451

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT----- 336
             +  M   G +P +V+YN +I G C+   +   HE++  +  +S   P+ +TYT     
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI-IESGLKPNAITYTILMEG 510

Query: 337 ------------------------------SVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
                                         S+I+G CK+G++ +A    N        P+
Sbjct: 511 SFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPT 570

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           ++T+N +IDG+ K G + SAE +   M      P+V+T++SLI+G+C++ +++  LK+ D
Sbjct: 571 SMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHD 630

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +MK K L  ++  +  LI   CK   + +A +F  +L    L P   +YN +I  +    
Sbjct: 631 DMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLN 690

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           N++ A  +  EM   +   D   +T LI G   +G++  A+ ++++ML  G  PD    N
Sbjct: 691 NMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYN 750

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
            LI+ L   G    A +I++ 
Sbjct: 751 VLINGLCNHGQLENAGKILKE 771



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 176/381 (46%), Gaps = 4/381 (1%)

Query: 188 LPNSPMIEFFVSSCIRAGK-CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           L +S +  + + S +RA K  +A +   +    G V    F+ N LL A++++N  ++A 
Sbjct: 149 LSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFV-NVLLTAMIRRNMVEDAH 207

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F E        D +T  +L++   + G+  +A  +F      G   D  +Y+ +I  +
Sbjct: 208 RLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAV 267

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           CR +++    +L+ E   +  + P   TY +VI    +LG   +A  + +EM    +  +
Sbjct: 268 CRGSDLDLASKLV-EGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVN 326

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
                 LI G+   G++ SA  + + ++  G  P+V  FS LI+   + G + +  +L  
Sbjct: 327 VAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYT 386

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            MK   L P V+    L+    K+N L +A   L     N  +     YN V+   C+ G
Sbjct: 387 RMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG-IASVVTYNIVLLWLCELG 445

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            V+EA  +  +M  K   P  V++  +I+GHC KG M +A  + N ++  G  P+ IT  
Sbjct: 446 KVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYT 505

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
            L+    K G    AF +  +
Sbjct: 506 ILMEGSFKKGDCEHAFNMFDQ 526



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 127/316 (40%), Gaps = 36/316 (11%)

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
           +   D+  FN L+    R  ++ +A E F  M   G  P +   N L++ + R N V   
Sbjct: 147 FKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDA 206

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           H L  E+  +  +  D  T   ++    K GK  +A   + +    G+K  A +++++I 
Sbjct: 207 HRLFDEMAERRIYG-DCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQ 265

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
              +  ++  A  + E     G++P   T++++I    R G   + L+L DEM    +  
Sbjct: 266 AVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPV 325

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV   T LI                                    G+C  G+V+ A  + 
Sbjct: 326 NVAVATSLIK-----------------------------------GYCVRGDVNSALRLF 350

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            E+ E    P+   F++LI      G + +A  ++ +M  +G  P    +N L+    K 
Sbjct: 351 DEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQ 410

Query: 556 GMPNEAFRIMQRASED 571
            +   A+ ++  A E+
Sbjct: 411 NLLENAYLLLDGAVEN 426



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 7/255 (2%)

Query: 317 ELLKEVKFKSEFS-PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           ELL E   +  F   D   +  ++  Y +  K+ +A   +  M   G+ P     NVL+ 
Sbjct: 136 ELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLT 195

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
              +   +  A  + + M       D  T   L+    + G+  +  +   +  G+ L  
Sbjct: 196 AMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKL 255

Query: 436 NVYTFTILINALCKENRLNDARRFLK---QLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           +  +++I+I A+C+ + L+ A + ++   +L W   VP    Y  VI    + GN  EA 
Sbjct: 256 DAASYSIVIQAVCRGSDLDLASKLVEGDEELGW---VPSEGTYAAVIGACVRLGNFGEAL 312

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  EM + R   +    T LI G+C++G +  A+ +F++++ +G  P+    + LI   
Sbjct: 313 RLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWC 372

Query: 553 LKGGMPNEAFRIMQR 567
            K G   +A  +  R
Sbjct: 373 SKIGNVEKANELYTR 387


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 203/422 (48%), Gaps = 4/422 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV  S      +YN ++   C  G  D+ + +   M  +   P++      +     
Sbjct: 108 EARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCG 164

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G+ D A  +L              Y  LL A  K++   +AV +  E       PD  T
Sbjct: 165 RGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVT 224

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N+++ G+ + G V  A EF   + S+GC P+ V+YN ++ GLC         +L+ E+ 
Sbjct: 225 YNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 284

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K    P+VVT+  +IS  C+ G ++ A  I +++   G  P+++++N ++  F K   M
Sbjct: 285 RKGR-PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKM 343

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A    E M+S G  PD+V++++L+   CR G+++  ++L  ++K K  +P + ++  +
Sbjct: 344 DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 403

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ L K  +  +A   L ++    L P    Y+ +  G C+ G ++EA     ++++   
Sbjct: 404 IDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGI 463

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           +P+ V +  +++G C +     AI +F  M+  GC P++ T   LI  L   G+  EA  
Sbjct: 464 RPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEARE 523

Query: 564 IM 565
           +M
Sbjct: 524 MM 525



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 163/341 (47%), Gaps = 1/341 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ + C+   +     + D MR  G  P+       V+   + G+ D A   L   
Sbjct: 189 TYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSL 248

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T  YN +L  L      ++A  +  E  R    P+  TFN+LI  L R G V
Sbjct: 249 PSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLV 308

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E    +  +GC+P+ ++YN ++   C+  ++ R    + E+   S   PD+V+Y +
Sbjct: 309 EPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV-ELMVSSGCYPDIVSYNT 367

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++  C+ G++D A  + +++   G  P  +++N +IDG  K G    A  +   M++ G
Sbjct: 368 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG 427

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++T+S++  G CR G++ + +K   +++   + PN   +  ++  LCK    + A 
Sbjct: 428 LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAI 487

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
                +  N  +P    Y  +I+G    G V EA  ++AE+
Sbjct: 488 DLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 166/350 (47%), Gaps = 12/350 (3%)

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-TFNILIQGLSRIGEV 277
           P  V   +   N  L  LV++ + +EA+ + +    L  +P        LI+ L   G  
Sbjct: 49  PNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGL--EPSAAGPCAALIKKLCASGRT 106

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A           C PD+++YN +++G C   ++     L+  +  +    PD  TY +
Sbjct: 107 AEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME----PDTYTYNT 157

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C  G+ D A  + ++M   G  P  VT+ +L++   K      A  + + M   G
Sbjct: 158 LIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG 217

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT++ +++G C+ G+++  ++    +      PN  ++ I++  LC   R  DA 
Sbjct: 218 CAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 277

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + + ++      P    +N +I   C+ G V+ A  I+ ++ +  C P+ +++  ++   
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C + +M  A++    M+  GC PD ++ N+L++ L +GG  + A  ++ +
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 42/233 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++ + C+    D      + M S G  P+       +++  R G+ DAA  LL Q 
Sbjct: 329 SYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 388

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    T     YN++++ L K    +EA+ +  E      QPD  T++ +  GL R G +
Sbjct: 389 KDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRI 448

Query: 278 KKAFEFF---YDMG--------------------------------SFGCSPDIVTYNTL 302
           ++A + F    DMG                                S GC P+  TY  L
Sbjct: 449 EEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTIL 508

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL--GKMDKATG 353
           I GL     V    E++ E+      S  VV+ T V  G  +L  G M  + G
Sbjct: 509 IEGLAYEGLVKEAREMMAEL-----CSRGVVSKTLVNKGAIRLLDGTMHTSKG 556


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 197/404 (48%), Gaps = 6/404 (1%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           +D+V  V+  M S   LP    +     S +       A  +LS        ++ +  N 
Sbjct: 58  YDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNL 117

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           +L    +    D+A+ +F +  R Y    PD  T+N L+ G  +   + +A   F  M  
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKK 177

Query: 290 FG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            G C P++VTY+ LI   C+  EV  G  LL+E++ +     DV  Y+S+IS +C  G +
Sbjct: 178 GGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEME-REGLKADVFVYSSLISAFCGEGDI 236

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           +    +++EM    + P+ VT++ L+ G G+ G    A  M + M + G  PDVV ++ L
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
            DG C+NG+    +K+ D M  K   P   T+ +++N LCKE+R++DA   ++ +     
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK 356

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            P    YN ++ G C AG + EA  +   +  E+   KPD  T   LI G C +GR+ +A
Sbjct: 357 KPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDA 416

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             I + M+ +G   + +T N LI   L      EA ++ + A E
Sbjct: 417 ARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 205/448 (45%), Gaps = 39/448 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TYN ++   C+       +V+F+ M+  G   PN       +    ++G+     GLL +
Sbjct: 151 TYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEE 210

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +    F+Y+SL++A   + + +    +F E  R    P+  T++ L+QGL R G 
Sbjct: 211 MEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR 270

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            ++A E   DM + G  PD+V Y  L  GLC+        ++L  +  K E  P  +TY 
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGE-EPGTLTYN 329

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS- 395
            V++G CK  +MD A G+   M   G KP AVT+N L+ G    G +  A  + + +LS 
Sbjct: 330 VVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE 389

Query: 396 -FGYLPDVVTFSSLIDGYCRNGQLN----------------------------------- 419
            F   PDV T ++LI G C+ G+++                                   
Sbjct: 390 KFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLI 449

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + LKL         SPN  T++++IN LCK   L+ AR    ++K + + P    YN ++
Sbjct: 450 EALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALM 509

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
              C+  ++++A  +  EM       D V+F I+I G    G +  A  + ++M  +   
Sbjct: 510 TSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLV 569

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQR 567
           PD +T + LI+   K GM +EA  + ++
Sbjct: 570 PDAVTFSILINRFSKLGMLDEAMGLYEK 597



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 11/401 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQ 216
           TY+ +M+ L   G       +   M + G  P+            + G+  DA K L   
Sbjct: 257 TYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLM 316

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            + GE    T  YN ++N L K++  D+A  + +   +   +PD  T+N L++GL   G+
Sbjct: 317 VQKGEEP-GTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGK 375

Query: 277 VKKAFEFFYDMGS--FGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPD 331
           + +A + +  + S  F   PD+ T N LI GLC   RV++ AR H  + E+  +     +
Sbjct: 376 IHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQG----N 431

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           +VTY  +I GY    K+ +A  ++      G  P+++T++V+I+G  K+  +  A  +  
Sbjct: 432 IVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFC 491

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M   G  P V+ +++L+   CR   L Q   L  EM+  N + +V +F I+I+   K  
Sbjct: 492 KMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAG 551

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            +  A+  L ++   DLVP    ++ +I+ F K G +DEA  +  +M      P  V F 
Sbjct: 552 DVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFD 611

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            L+ G+ +KG   + IS+ ++M       D    +++++CL
Sbjct: 612 SLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACL 652



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 156/313 (49%), Gaps = 4/313 (1%)

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           S P     + LI  L +  +       ++ M S    P   + + L       +  +   
Sbjct: 38  SPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAF 97

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLI 374
            +L  +  K  F  +V     V+ G+C+ G+ DKA  ++++M  N   + P  VT+N L+
Sbjct: 98  SVL-SLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLV 156

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           +GF K   +  A  + E M   G   P++VT+S LID YC++G++ +GL L +EM+ + L
Sbjct: 157 NGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGL 216

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
             +V+ ++ LI+A C E  +   R    ++    + P    Y+ ++ G  + G   EA+ 
Sbjct: 217 KADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASE 276

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ +M  +  +PD V +T+L  G C  GR  +AI + + M++ G  P  +T N +++ L 
Sbjct: 277 MLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLC 336

Query: 554 KGGMPNEAFRIMQ 566
           K    ++AF +++
Sbjct: 337 KEDRMDDAFGVVE 349



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 3/169 (1%)

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S+LID   +  Q +  + +  +M    + P   + + L  +    +  + A   L  +  
Sbjct: 46  STLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTK 105

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR--CKPDKVTFTILIIGHCMKGRM 523
                  +  N V+ GFC++G  D+A  + ++M+       PD VT+  L+ G C   R+
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRL 165

Query: 524 VEAISIFNKMLRIG-CAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            EA  +F  M + G C P+ +T + LI C  K G   E   +++    +
Sbjct: 166 AEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 76/176 (43%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN +M SLC     +  + +F  MR+  H  +       +   ++AG   +AK LLS+  
Sbjct: 505 YNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMF 564

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++      ++ L+N   K    DEA+ ++++       P    F+ L++G    GE +
Sbjct: 565 MMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETE 624

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           K     + M       D    +T+++ LC ++      ++L +   +SE +    T
Sbjct: 625 KIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQSEHTSKGTT 680


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 196/406 (48%), Gaps = 4/406 (0%)

Query: 157 KTYNLVMRSLCEMGLH-DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +T N V+R       H    +  FD M   G  P++      V  C + G+ + A  LL+
Sbjct: 149 ETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRALVLGCCQEGRFEEADALLA 205

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                  ++ +     ++ A  +Q    +   +F     + + P+   +   + GL + G
Sbjct: 206 AMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRG 265

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            VK+AF    +M   G  P++ T+ +LI GLC++    R   L  ++   S + P+V TY
Sbjct: 266 YVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTY 325

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I GYCK GK+ +A  +   M   G+ P+  T+  LIDG  + G+   A  +  +M  
Sbjct: 326 TVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKL 385

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G+LP++ T++++I G+C+ G++ Q  K+      + L P+  T+T+LI   CK+  +  
Sbjct: 386 EGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITY 445

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     Q+  N   P    Y  +I  +C+   ++++  +  +       P K T+T +I 
Sbjct: 446 ALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIA 505

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           G+C  G+   A+ +F +M++ GC PD IT  +LIS L K     EA
Sbjct: 506 GYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEA 551



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 172/331 (51%), Gaps = 6/331 (1%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           M++E F L    D+ T  ++++   R G  +     F  M   G  P++V Y   + GLC
Sbjct: 207 MWREGFSL----DSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLC 262

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKPS 366
           +   V +   +L+E+  K    P+V T+TS+I G CK+G  ++A  ++ ++  S   KP+
Sbjct: 263 KRGYVKQAFHVLEEMVGKG-LKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPN 321

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+ V+I G+ K G +  AE +  RM+  G  P+  T+++LIDG+CR G  ++  +L +
Sbjct: 322 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMN 381

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +MK +   PN+YT+  +I   CK+ ++  A + L+      L P    Y  +I   CK G
Sbjct: 382 KMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQG 441

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           ++  A  +  +M E  C PD  T+T +I  +C + +M ++  +F+K L IG  P   T  
Sbjct: 442 HITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYT 501

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           S+I+   + G    A ++ +R  +   L  P
Sbjct: 502 SMIAGYCRVGKSTSALKVFERMVQHGCLPDP 532



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 189/393 (48%), Gaps = 2/393 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +++  ++   C+ G  +    +   M  +G   +S      V +  R G+     GL  +
Sbjct: 182 RSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGR 241

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   Y + ++ L K+    +A ++ +E      +P+ +T   LI GL +IG 
Sbjct: 242 MVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 277 VKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            ++AF  F  +  S    P++ TY  +I G C+  ++AR   LL  +  +   +P+  TY
Sbjct: 302 TERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRM-VEQGLAPNTNTY 360

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G+C+ G  D+A  + N+M   G  P+  T+N +I GF K G +  A  +     S
Sbjct: 361 TTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATS 420

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD VT++ LI  +C+ G +   L L ++M   +  P++ T+T +I   C++ ++  
Sbjct: 421 QGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQ 480

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           +++   +     LVP    Y  +I G+C+ G    A  +   M +  C PD +T+  LI 
Sbjct: 481 SQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALIS 540

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           G C + R+ EA ++F  ML     P D+T  +L
Sbjct: 541 GLCKESRLEEARALFETMLDKHMVPCDVTCVTL 573



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 179/377 (47%), Gaps = 2/377 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T  +V+R+ C  G    V  +F  M   G+ PN      +V    + G    A  +L + 
Sbjct: 218 TCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEM 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
               +  + + + SL++ L K    + A  +F +  +  S +P+  T+ ++I G  + G+
Sbjct: 278 VGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGK 337

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A      M   G +P+  TY TLI G CR     R  EL+ ++K +  F P++ TY 
Sbjct: 338 LARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEG-FLPNIYTYN 396

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G+CK GK+ +A  +     S G+ P  VT+ +LI    K G++  A  +  +M   
Sbjct: 397 AIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAEN 456

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD+ T++++I  YC+  Q+ Q  +L D+     L P   T+T +I   C+  +   A
Sbjct: 457 SCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSA 516

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  +++  +  +P P  Y  +I G CK   ++EA  +   M +K   P  VT   L   
Sbjct: 517 LKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYE 576

Query: 517 HCMKGRMVEAISIFNKM 533
           +C + +   A+S  + +
Sbjct: 577 YCRRDKTTIAVSFLDGL 593



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 178/368 (48%), Gaps = 5/368 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           V   L  +  T+  ++  LC++G  + + ++    ++S  + PN       +    + GK
Sbjct: 278 VGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGK 337

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A+ LL +     +  +T  Y +L++   +  + D A  +  +       P+ +T+N 
Sbjct: 338 LARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNA 397

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I G  + G++++A++      S G  PD VTY  LI+  C+   +    +L  ++  ++
Sbjct: 398 IIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMA-EN 456

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD+ TYT++I+ YC+  +M+++  ++++  S G+ P+  T+  +I G+ +VG   SA
Sbjct: 457 SCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSA 516

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + ERM+  G LPD +T+ +LI G C+  +L +   L + M  K++ P   T   L   
Sbjct: 517 LKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYE 576

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            C+ ++   A  FL  L   D   +    + ++       N+D A++ +  + +K    D
Sbjct: 577 YCRRDKTTIAVSFLDGL---DKRQQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVD 633

Query: 507 KVTFTILI 514
             T+T  I
Sbjct: 634 HATYTSFI 641


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 179/348 (51%), Gaps = 6/348 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           +RP  +T +T     L++ L   N A EAV +     +   QP+  T+ +++ GL + G+
Sbjct: 110 YRPDTITFTT-----LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 164

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  AF     M +     D+V +NT+I  LC+   V     L KE++ K    P+VVTY+
Sbjct: 165 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG-IRPNVVTYS 223

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+IS  C  G+   A+ + ++M    I P+ VTFN LID F K G  V AE + + M+  
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 283

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD+ T++SLI+G+C + +L++  ++ + M  K+  P++ T+  LI   CK  R+ D 
Sbjct: 284 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 343

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +++    LV     Y  +I G    G+ D A  +  +M      PD +T++IL+ G
Sbjct: 344 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            C  G++ +A+ +F+ M +     D     ++I  + K G  ++ + +
Sbjct: 404 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 451



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 179/355 (50%), Gaps = 9/355 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+S     SLLN         +AV +  +   +  +PDT TF  LI GL    +
Sbjct: 75  YEPSIVTLS-----SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 129

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             +A      M   GC P++VTY  +++GLC+  ++     LL +++  ++   DVV + 
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-AAKIEADVVIFN 188

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I   CK   +D A  ++ EM + GI+P+ VT++ LI      G    A  +   M+  
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P++VTF++LID + + G+  +  KL D+M  +++ P+++T+  LIN  C  +RL+ A
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 308

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++  + +   D  P    YN +I GFCK+  V++   +  EM  +    D VT+T LI G
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQRA 568
               G    A  +F +M+  G  PD +T + L+  L   G      E F  MQ++
Sbjct: 369 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 423



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 186/379 (49%), Gaps = 1/379 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + D M   G  PN       V+   + G  D A  LL++    ++     ++N+++++L 
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K  + D+A+ +FKE      +P+  T++ LI  L   G    A +   DM     +P++V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+N LI    +  +     +L  ++  K    PD+ TY S+I+G+C   ++DKA  ++  
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDM-IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 314

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S    P   T+N LI GF K   +     +   M   G + D VT+++LI G   +G 
Sbjct: 315 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 374

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   K+  +M    + P++ T++IL++ LC   +L  A      ++ +++    ++Y  
Sbjct: 375 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 434

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G CKAG VD+   +   +  K  KP+ VT+  +I G C K  + EA ++  KM   G
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494

Query: 538 CAPDDITVNSLISCLLKGG 556
             PD  T N+LI   L+ G
Sbjct: 495 PLPDSGTYNTLIRAHLRDG 513



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 174/368 (47%), Gaps = 3/368 (0%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV--YMFKEYFRLYSQPDTWT 263
           K D A GL           S F +N LL+A+ K    D  +   +  +  +L  +P   T
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            + L+ G      +  A      M   G  PD +T+ TLI GL   N+ +    L+  + 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM- 140

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +    P++VTY  V++G CK G +D A  + N+M +  I+   V FN +ID   K  ++
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + + M + G  P+VVT+SSLI   C  G+ +   +L  +M  K ++PN+ TF  L
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+A  KE +  +A +    +    + P  F YN +I+GFC    +D+A  +   M  K C
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            PD  T+  LI G C   R+ +   +F +M   G   D +T  +LI  L   G  + A +
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 564 IMQRASED 571
           + ++   D
Sbjct: 381 VFKQMVSD 388


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 224/450 (49%), Gaps = 5/450 (1%)

Query: 121 LSPLNSLEVIKRLDNPKL-GLKFLEFSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           ++P+   +VI+ L N K+ G     F ++       + + YN ++  L   G ++ V  +
Sbjct: 157 VTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL 216

Query: 179 FDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           ++ M ++GH  P++      +S+  + G+ D+A  LL++ +   +  +  +Y  +++   
Sbjct: 217 YNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFF 276

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K +N   A+ +F+E   +Y +PD +T+  LI+GL + G + +A+ F+++M    C PD V
Sbjct: 277 KLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTV 336

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG-YCKLGKMDKATGIYN 356
             N +I+ L +   +  G +L +E+   S   P+VVTY ++I   +    ++ +    + 
Sbjct: 337 VMNNMINFLGKAGRLDDGLKLFEEMGV-SHCIPNVVTYNTIIKALFESKSRVSEVFSWFE 395

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M   GI PS  T+++LIDGF K   +  A  + E M   G+ P    + SLID   +  
Sbjct: 396 RMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 455

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           + +   +L  E+K    S +   + ++I  L K  RL+DA     ++      P  + YN
Sbjct: 456 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYN 515

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G  +A  +DEA   + +M+E  C PD  ++ I++ G    G    A+ +   M   
Sbjct: 516 ALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNS 575

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              PD ++ N+++S L   GM  EA  +M+
Sbjct: 576 TIKPDAVSYNTVLSALSHAGMFEEAAELMK 605



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 174/345 (50%), Gaps = 5/345 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRL-YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           YNS++  L+ +   ++   ++ E     +  PDT T++ LI    ++G    A     +M
Sbjct: 197 YNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEM 256

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  P    Y  +IS   +++ V     L +E+++     PDV TYT +I G  K G+
Sbjct: 257 KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY-CRPDVFTYTELIRGLGKAGR 315

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D+A   Y+EM     KP  V  N +I+  GK G +     + E M     +P+VVT+++
Sbjct: 316 IDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNT 375

Query: 408 LIDG-YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +I   +    ++++     + MKG  +SP+ +T++ILI+  CK NR+  A   L+++   
Sbjct: 376 IIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEK 435

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK-GRMVE 525
              P P  Y  +ID   KA   D A  +  E++E  C         ++I H  K GR+ +
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN-CGSSSARVYAVMIKHLGKAGRLDD 494

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           AI++F++M ++GC P+    N+L+S L +  M +EA   M++  E
Sbjct: 495 AINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQE 539



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 172/396 (43%), Gaps = 43/396 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ + C++G  DS   + + M+ +G  P + +    +S   +      A  L  + 
Sbjct: 232 TYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM 291

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R        F Y  L+  L K    DEA + + E  R   +PDT   N +I  L + G +
Sbjct: 292 RYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRL 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGL----CRVNEVARGHELLKEVKFKSEFSPDVV 333
               + F +MG   C P++VTYNT+I  L     RV+EV    E +K     S  SP   
Sbjct: 352 DDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMK----GSGISPSPF 407

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKP---------------------------- 365
           TY+ +I G+CK  +++KA  +  EM+  G  P                            
Sbjct: 408 TYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467

Query: 366 -------SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                  SA  + V+I   GK G +  A  + + M   G  P+V  +++L+ G  R   L
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACML 527

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++ L    +M+     P++ ++ I++N L K    + A   L  +K + + P    YN V
Sbjct: 528 DEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTV 587

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +     AG  +EA  ++ EM     + D +T++ ++
Sbjct: 588 LSALSHAGMFEEAAELMKEMNALGFEYDLITYSSIL 623



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 1/223 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++   C+    +   ++ + M   G  P        + +  +A + D A  L  + 
Sbjct: 408 TYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    + S  +Y  ++  L K    D+A+ +F E  +L   P+ + +N L+ GL+R   +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACML 527

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   GC PDI +YN +++GL +     R  E+L  +K  S   PD V+Y +
Sbjct: 528 DEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK-NSTIKPDAVSYNT 586

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           V+S     G  ++A  +  EMN+ G +   +T++ +++  GKV
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 70/157 (44%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S + Y ++++ L + G  D    +FD M   G  PN       +S   RA   D A   +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +          YN +LN L K      A+ M         +PD  ++N ++  LS  
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHA 594

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           G  ++A E   +M + G   D++TY++++  + +V++
Sbjct: 595 GMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 2/145 (1%)

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL-VPKPFMYNPVIDGFCKAGN 487
           K +N   +  T+  LI+ L    +  +  + ++++  + + V  P   + VI     A  
Sbjct: 115 KKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKM 174

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVN 546
           + +A  I  +++ ++C+P    +  +II    +G+  +   ++N+M   G C PD +T +
Sbjct: 175 IGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYS 234

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
           +LIS   K G  + A R++    E+
Sbjct: 235 ALISAFCKLGRQDSAIRLLNEMKEN 259


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 197/406 (48%), Gaps = 9/406 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL------PNSPMIEFFVSSCIRAGKCD 208
           S  T+ +++  LC+    D    VFD +R  G        P+  +    +    + GK +
Sbjct: 315 SVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEE 374

Query: 209 AAKGLLSQFRPGEVTM-STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
               LL + + G +   +T  YN L++   K  N D A  +F++      QP+  T N L
Sbjct: 375 DGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTL 434

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G V +A EFF +M   G   +  TY  LIS  C VN + R  +  +E+   S 
Sbjct: 435 VDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEM-LSSG 493

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SPD V Y S+ISG C  G+M+ A+ + +++   G       +NVLI GF K   +    
Sbjct: 494 CSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVY 553

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M   G  PD +T+++LI    + G      K+ ++M  + L P+V T+  +I+A 
Sbjct: 554 ELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAY 613

Query: 448 CKENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           C +  +++  +   ++   + + P   +YN +ID  C+  +VD A  ++ +M+ KR +P+
Sbjct: 614 CSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPN 673

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             T+  ++ G   K  + +A  + ++M+   C PD IT+  L   L
Sbjct: 674 TTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 190/382 (49%), Gaps = 9/382 (2%)

Query: 195 EFFVSSCIRAGKC---DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
           E      +R+G+        GL+++     V    F    L+  L        A  +   
Sbjct: 212 EIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHC 271

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
             RL    D  + N L+  L R  ++K+  E   +M      P +VT+  L++ LC+   
Sbjct: 272 VMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARR 331

Query: 312 VARGHELLKEVKFKSE-----FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI-KP 365
           +    ++   ++ K         PDVV + ++I G CK+GK +    +  EM    I +P
Sbjct: 332 IDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRP 391

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           + VT+N LIDGF K GN   A  +  +M   G  P+V+T ++L+DG C++G++++ ++  
Sbjct: 392 NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF 451

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           +EMKGK L  N  T+T LI+A C  N +N A +  +++  +   P   +Y  +I G C A
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIA 511

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +++A+V+V++++      D+  + +LI G C K ++     +  +M   G  PD IT 
Sbjct: 512 GRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITY 571

Query: 546 NSLISCLLKGGMPNEAFRIMQR 567
           N+LIS L K G    A ++M++
Sbjct: 572 NTLISYLGKTGDFATASKVMEK 593



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 169/346 (48%), Gaps = 3/346 (0%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEY-FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           ++N+L++ L K    ++ + + +E      ++P+T T+N LI G  + G   +A E F  
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  P+++T NTL+ GLC+   V R  E   E+K K     +  TYT++IS +C + 
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG-LKGNAATYTALISAFCGVN 477

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +++A   + EM S G  P AV +  LI G    G M  A  +  ++   G+  D   ++
Sbjct: 478 NINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYN 537

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            LI G+C+  +L +  +L  EM+   + P+  T+  LI+ L K      A + ++++   
Sbjct: 538 VLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKE 597

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMKGRMVE 525
            L P    Y  +I  +C   NVDE   I  EM    +  P+ V + ILI   C    +  
Sbjct: 598 GLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDR 657

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           AIS+   M      P+  T N+++  +    M ++AF +M R  E+
Sbjct: 658 AISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEE 703



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 175/365 (47%), Gaps = 15/365 (4%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS---------QPDTWT 263
           LL++    ++  S   +  L+N L K    DEA+ +F    RL           +PD   
Sbjct: 303 LLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFD---RLRGKGGSNWVGVEPDVVL 359

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCS-PDIVTYNTLISGLCRVNEVARGHELLKEV 322
           FN LI GL ++G+ +       +M     + P+ VTYN LI G  +     R HEL +++
Sbjct: 360 FNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQM 419

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +    P+V+T  +++ G CK G++ +A   +NEM   G+K +A T+  LI  F  V N
Sbjct: 420 N-EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A    E MLS G  PD V + SLI G C  G++N    +  ++K    S +   + +
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+  CK+ +L      L +++   + P    YN +I    K G+   A+ ++ +M ++ 
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVNSLISCLLKGGMPNEA 561
            +P  VT+  +I  +C K  + E + IF +M       P+ +  N LI  L +    + A
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658

Query: 562 FRIMQ 566
             +M+
Sbjct: 659 ISLME 663



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 142/340 (41%), Gaps = 37/340 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  D    +F  M  +G  PN   +   V    + G+   A    ++ 
Sbjct: 395 TYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM 454

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF------------- 264
           +   +  +   Y +L++A    NN + A+  F+E       PD   +             
Sbjct: 455 KGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRM 514

Query: 265 ----------------------NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                 N+LI G  +  ++++ +E   +M   G  PD +TYNTL
Sbjct: 515 NDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTL 574

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           IS L +  + A   ++++++  K    P VVTY ++I  YC    +D+   I+ EM S  
Sbjct: 575 ISYLGKTGDFATASKVMEKM-IKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTS 633

Query: 363 -IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            + P+ V +N+LID   +  ++  A  + E M      P+  T+++++ G      L++ 
Sbjct: 634 KVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKA 693

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            +L D M  +   P+  T  +L   L     +   + F++
Sbjct: 694 FELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVE 733



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 1/133 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-NSPMIEFFVSSCIRAGKCDAA 210
           L  S  TY  ++ + C     D    +F  M S   +P N+ +    + +  R    D A
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L+   +   V  +T  YN++L  +  +    +A  +         +PD  T  +L + 
Sbjct: 659 ISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEW 718

Query: 271 LSRIGEVKKAFEF 283
           LS +GE++K   F
Sbjct: 719 LSAVGEIEKLKHF 731


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 195/403 (48%), Gaps = 6/403 (1%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           +LC+MG ++    +F  M++ G  PN       +S    +G    A GL  +     V  
Sbjct: 499 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 558

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  YN+L+N LV+      A  +     R     +  T+N +I+G   +G+ KKA    
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM 618

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G S ++VTYNT+I G C          +L  ++      PD  +YT +I G+CK
Sbjct: 619 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR-DGGCKPDEWSYTELICGFCK 677

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           + KM+ A G++NEM   G+ P+ VT+  LIDG+ K   + +A  + E M   G  P+V T
Sbjct: 678 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 737

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++ LI G  +    +   +LC  M  + + PNV T+T +I+ LCK    + A     ++ 
Sbjct: 738 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 797

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
               +P    Y+ +I    + G V+EA  + AE+E     PD++T+  +I  + M G++ 
Sbjct: 798 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 857

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            A +   +M++ GC P   T   LI      G+ NE     QR
Sbjct: 858 HAFNFLGRMIKAGCQPTLWTYGVLIK-----GLKNEYLLADQR 895



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 213/473 (45%), Gaps = 69/473 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ ++  L  +G+  +V   +  M S+G  PN  +    +++  + G    A+ ++ + 
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E++  TF Y S++    ++++ D A+ +F +  +   +P+T T++ LI GL   G V
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471

Query: 278 KKAFE-----------------------------------FFYDMGSFGCSPDIVTYNTL 302
            +AF+                                    F DM + GC P++ TY  L
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 531

Query: 303 ISGLCRVN--EVARG--HELLKEVKFKSEFS----------------------------- 329
           ISGLC     +VA G  H + ++  F +  +                             
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL 591

Query: 330 -PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
             ++VTY  +I GYC LG   KA  + N M   G   + VT+N +I G+   GN  SA  
Sbjct: 592 FTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G  PD  +++ LI G+C+  ++     L +EM    L PN  T+T LI+  C
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ +L+ A   L+ +K +   P    YN +I G  K  N   A  +   M E+   P+ V
Sbjct: 712 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 771

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           T+T +I G C  G    A+ +FNKM+  GC P+ +T +SLI  L + G   EA
Sbjct: 772 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 824



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 197/413 (47%), Gaps = 7/413 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRS---DGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           TY+ ++  LC+ G    V   FD +R     G LP +      + +    G  + A  L 
Sbjct: 457 TYSTLINGLCDSG---RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF 513

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              +      + + Y +L++ L        A+ +F    R    P+T T+N LI  L   
Sbjct: 514 VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 573

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             +K AF     MG  G   +IVTYN +I G C + +  +   ++  +  +   S ++VT
Sbjct: 574 RRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVT 632

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I GYC  G    A  I + M   G KP   ++  LI GF K+  M SA  +   M+
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P+ VT+++LIDGYC++ +L+    L + MK     PNV T+ +LI+ L K+N  +
Sbjct: 693 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 752

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A    K +    + P    Y  +IDG CK G+   A  +  +M E+ C P+ +T++ LI
Sbjct: 753 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 812

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
                +G++ EA ++F ++ R G  PD+IT   +I   +  G    AF  + R
Sbjct: 813 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 168/334 (50%), Gaps = 5/334 (1%)

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDT----WTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L+K  ++ EA+     +  + SQ       + ++ L+  LSR+G      + ++ M S G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P+++ YN +I+ LC+   VA    ++K+V F+SE SPD  TYTS+I G+C+   +D A
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKV-FESEMSPDTFTYTSMILGHCRKHDLDSA 439

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++N+M   G +P+ VT++ LI+G    G +  A  +   M+  G LP   T +  I  
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C  G      +L  +MK K   PNVYT+T LI+ LC    L  A     ++  + + P 
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +I+   +   +  A V++  M       + VT+  +I G+C+ G   +A+ + N
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            ML+ G + + +T N++I      G    A RI+
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 653



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 182/471 (38%), Gaps = 63/471 (13%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYN +++  C +G      +V + M   GH  N       +     +G   +A  +L   
Sbjct: 597  TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 656

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            R G      + Y  L+    K +  + A  +F E       P+  T+  LI G  +  ++
Sbjct: 657  RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 716

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
              A      M   GC P++ TYN LI GL + N  +   EL K V  +    P+VVTYT+
Sbjct: 717  DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK-VMIEEGIFPNVVTYTA 775

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I G CK G    A  ++N+M   G  P+ +T++ LI   G+ G +  AE +   +   G
Sbjct: 776  MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 835

Query: 398  YLPDVVTFSSLIDGYCRNGQ-------------------------LNQGLK----LCDE- 427
             +PD +T+  +I+ Y  +G+                         L +GLK    L D+ 
Sbjct: 836  LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 895

Query: 428  ---------------------------MKGKNLSP--NVYTFTILINALCKENRLNDARR 458
                                        K   L P  +V     L++ L    R  +A  
Sbjct: 896  LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANE 955

Query: 459  FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             L  +    L P    YN ++    +  NVD A  +   M  + C+     +  LI   C
Sbjct: 956  LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 1015

Query: 519  MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQ 566
               R  EA   F  ML     PDD+    LI  LL+ G  +   E   IM+
Sbjct: 1016 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIME 1066



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 144/357 (40%), Gaps = 12/357 (3%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            +TYN+++  L +       + +   M  +G  PN       +    + G    A  + ++
Sbjct: 736  QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 795

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                    +   Y+SL+ AL ++   +EA  +F E  R    PD  T+  +I+     G+
Sbjct: 796  MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 855

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            V+ AF F   M   GC P + TY  LI GL       +   LL + +  +   PDVV   
Sbjct: 856  VEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-------KNEYLLADQRLAA--LPDVVPNC 906

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            S   GY +    D  + +  ++       S    N L+      G    A  +   M+S 
Sbjct: 907  SF--GY-QTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQ 963

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            G  PD   ++SL+    R   ++  + +   M  +    ++  +  LI ALC+ +R  +A
Sbjct: 964  GLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEA 1023

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            R   + +      P   +   +IDG  + G  D     +  ME +R  P    +TIL
Sbjct: 1024 RITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 120/317 (37%), Gaps = 25/317 (7%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY  ++  LC+ G       +F+ M   G LPN       + +  + GK + A+ L ++ 
Sbjct: 772  TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 831

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL------ 271
                +      Y  ++ A +     + A        +   QP  WT+ +LI+GL      
Sbjct: 832  ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 891

Query: 272  -----SRIGEVKKAFEFFYD-------------MGSFGCSPDIVTYNTLISGLCRVNEVA 313
                 + + +V     F Y              +        +   N L+S L       
Sbjct: 892  ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 951

Query: 314  RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              +ELL  +       PD   Y S++    ++  +D A G++  M++ G +     +  L
Sbjct: 952  EANELLGSM-ISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 1010

Query: 374  IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            I    ++     A    E ML   + PD V  + LIDG  R+G  +  ++    M+ +  
Sbjct: 1011 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRY 1070

Query: 434  SPNVYTFTILINALCKE 450
             P+ + +TIL     K+
Sbjct: 1071 MPSFHIYTILAREASKK 1087


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 201/403 (49%), Gaps = 17/403 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TY  +++ LC         ++F  M+  G  PN+      +    R G    A  L  + 
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227

Query: 217 ----------FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
                     F+P  ++     Y+ +++AL K    DEA  +F+E       P   ++  
Sbjct: 228 LNDSSLYGINFKPVVIS-----YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTS 282

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI G    G+ ++A   F +M + G  P++VT+N LI  LC+  +V    +LL EV  + 
Sbjct: 283 LIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL-EVMIQR 341

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              P+++TY S+I G+C +G ++ A  ++  M S G +P  + + VLI+G+ K   +  A
Sbjct: 342 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 401

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   ML  G  PDV T+ +L+ G  + G++    KL   MK   +  ++Y + I +N 
Sbjct: 402 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 461

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK   L +A     +LK  ++      +N +IDG CKAG ++ A  +  ++ ++  +PD
Sbjct: 462 LCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPD 521

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            VT+ I+I   C  G++V+A  +F KM + GC PD IT  +LI
Sbjct: 522 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 564



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 191/384 (49%), Gaps = 7/384 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL------PNSPMIEFFVSSCIRAGKCDAAK 211
           TY  +M+ LC  G       +   M +D  L      P        + +  +  + D A+
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEAR 262

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  + +   +T +   Y SL++        +EA  +F E      QP+  TFN+LI  L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 322

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G+V +A +    M   G  P+++TYN+LI G C V ++    EL   +  K    PD
Sbjct: 323 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG-CEPD 381

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V+ YT +I+GYCK  K+++A  +YN M   G +P   T+  L+ G  + G +  A+ +  
Sbjct: 382 VICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFG 441

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M  +G   D+  +   ++G C+NG L + ++L +++K  N+  ++  F  LI+ LCK  
Sbjct: 442 VMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAG 501

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +L  A    ++L   +L P    YN +I  FC+ G V +AN++  +ME+  C PDK+T+ 
Sbjct: 502 KLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYA 561

Query: 512 ILIIGHCMKGRMVEAISIFNKMLR 535
            LI G     ++ + + + + M++
Sbjct: 562 TLIRGFFESKKLEKVVELLHMMVQ 585



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 186/401 (46%), Gaps = 42/401 (10%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L +Q R   ++      N LLN L   N   E + +     R    PD  T+  LI+GL 
Sbjct: 118 LYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLC 177

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA------------------- 313
               + KA   F  M   GC+P+ +TY TL+ GLCR   ++                   
Sbjct: 178 MEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGIN 237

Query: 314 ----------------------RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
                                    +L +E+K +   +P V++YTS+I G+C  GK ++A
Sbjct: 238 FKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG-MTPTVISYTSLIHGFCCGGKWEEA 296

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++NEM + G++P+ VTFNVLID   K G ++ A+ + E M+  G +P+++T++SLI+G
Sbjct: 297 KRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 356

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           +C  G LN   +L   M  K   P+V  +T+LIN  CK +++ +A +    +      P 
Sbjct: 357 FCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPD 416

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              Y  ++ G  + G V +A  +   M+      D   + I + G C  G + EA+ +FN
Sbjct: 417 VKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 476

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           K+       D    N LI  L K G    A+ + ++  +++
Sbjct: 477 KLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE 517



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 171/349 (48%), Gaps = 1/349 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y++++ +LC+    D  + +F+ M+  G  P        +      GK + AK L ++ 
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   +N L++ L K+    EA  + +   +    P+  T+N LI+G   +G++
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M S GC PD++ Y  LI+G C+ ++V    +L   +  +    PDV TY +
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM-LQVGKRPDVKTYGA 422

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G  + GK+  A  ++  M   GI      + + ++G  K G +  A  +  ++ S+ 
Sbjct: 423 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 482

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+  F+ LIDG C+ G+L    +L +++  + L P+V T+ I+I+  C+  ++  A 
Sbjct: 483 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 542

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
              ++++ N   P    Y  +I GF ++  +++   ++  M ++    D
Sbjct: 543 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 140/290 (48%), Gaps = 1/290 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +  +  T+N+++  LC+ G     + + + M   G +PN       +      G  
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           ++A+ L               Y  L+N   K +  +EA+ ++    ++  +PD  T+  L
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G+V  A + F  M  +G   D+  Y   ++GLC+   +    EL  ++K    
Sbjct: 424 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK-SYN 482

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              D+  +  +I G CK GK++ A  ++ ++    ++P  VT+N++I  F + G +V A 
Sbjct: 483 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 542

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + ++M   G  PD +T+++LI G+  + +L + ++L   M  +++S +V
Sbjct: 543 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 2/173 (1%)

Query: 413 CRNGQLN--QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           C+ G +   Q  +    M   N +P + +FT L++ L K    +       Q++ + + P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
                N +++  C    V E   ++A +  +   PD VT+T LI G CM+ R+ +A  +F
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
            +M ++GC P+ IT  +L+  L + G  + A ++ Q    D +L   ++K  V
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVV 242


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 216/414 (52%), Gaps = 10/414 (2%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           N ++++L E    + + + +D+   M+S G   N+ +I  F+S     G  D    LL +
Sbjct: 190 NSLLKALLE---SEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLME 246

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +      Y  ++++L K +   EA  +  +  ++    D+ + + ++ G  ++G+
Sbjct: 247 MKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGK 306

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            ++A +    +  F  SP+I  +N+ IS LC    + +  ++ +++  +    PD  +YT
Sbjct: 307 SEEAMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDM-CEMGLIPDCFSYT 362

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++++GYCK+  +  A     +M   GI+PS  T+ +LID   K GNM  AEY+ +RM++ 
Sbjct: 363 TMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITE 422

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +PDVV++++L++GY + G L +  +L   M+   +SP++ T+ ILI+ L K   +N+A
Sbjct: 423 GLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEA 482

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +  L +L      P    +  +I GF   GN +EA ++   M E   +PD VT + L+ G
Sbjct: 483 KDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNG 542

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +C    M EA  +F+KML  G   D I  NSLI      G  ++A  ++    E
Sbjct: 543 YCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIE 596



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 177/360 (49%), Gaps = 4/360 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y +V+ SLC+M L      +   M   G   +S  +   V    + GK + A  +L  F
Sbjct: 258 AYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF 317

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ + F++NS ++ L    N  +A  +F++   +   PD +++  ++ G  ++ ++
Sbjct: 318 N---LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDI 374

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A ++   M   G  P + TY  LI   C+   +     L + +       PDVV+Y +
Sbjct: 375 SNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRM-ITEGLVPDVVSYNT 433

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GY K G + KA  + + M S G+ P  VT+N+LI G  K G +  A+ + + +   G
Sbjct: 434 LMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRG 493

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + PDVVTF+++I G+   G   +   L   M   +L P+V T + L+N  C+   + +A 
Sbjct: 494 FSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEAN 553

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    L     +YN +I GFC  GN+D+A  +V+ M E    P+ +T   L++G+
Sbjct: 554 VLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGY 613



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 173/377 (45%), Gaps = 33/377 (8%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           +Y  L+N  VK+N    A+ +  +   L   P     N L++ L    ++  A++F  +M
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            S G   +    +  ISG C    +  G +LL E+K+     PDVV YT VI   CK+  
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLG-IKPDVVAYTIVIDSLCKMSL 271

Query: 348 MDKATGIYNEMNSCGI--------------------------------KPSAVTFNVLID 375
           + +AT I  +M   G+                                 P+   FN  I 
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFIS 331

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
                GNM+ A  + + M   G +PD  ++++++ GYC+   ++  LK   +M  + + P
Sbjct: 332 KLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRP 391

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +V T+T+LI++ CK   +  A    +++    LVP    YN +++G+ K G++ +A  ++
Sbjct: 392 SVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELL 451

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           + M      PD VT+ ILI G   +G + EA  I +++ R G +PD +T  ++I      
Sbjct: 452 SMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNK 511

Query: 556 GMPNEAFRIMQRASEDQ 572
           G   EAF +    SE  
Sbjct: 512 GNFEEAFLLFFYMSEHH 528



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 7/199 (3%)

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           +++N   +G+  +   +   + + R+L          +  L++ Y +       LKL  +
Sbjct: 124 ISYNSGEEGWHNIFLKIHETHTKRRVLE-------TVYGMLVNCYVKENMTQVALKLICK 176

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+  N+ P +     L+ AL +  +LN A  FLK++K   L     + +  I G+C  GN
Sbjct: 177 MRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGN 236

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +D    ++ EM+    KPD V +TI+I   C    + EA SI  KM ++G   D ++V+S
Sbjct: 237 IDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSS 296

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           ++    K G   EA  +++
Sbjct: 297 VVDGYCKVGKSEEAMDVLE 315


>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g38730-like [Brachypodium distachyon]
          Length = 599

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 190/374 (50%), Gaps = 1/374 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++ +L    +  +   VF+ M   G   N+ +    +  C++A     A+GL+++     
Sbjct: 152 LLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAG 211

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V +  F +N+++   V++    EA+ + +       +PD  T+N +I GL + G +K+A 
Sbjct: 212 VPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAA 271

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +   DM +    PD VTY TL+ G CR+ +V    +L +E++      P V TY ++I  
Sbjct: 272 QLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEME-AGGMVPGVATYNAIIRK 330

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C+ GKM +  G+ +EM+   ++   VT N LI+ + K G+M SA  +++RM+  G   D
Sbjct: 331 LCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLD 390

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T+ +LI G+C+  +L++  +   EM G+  SPN   F+ L++  CK+N  +       
Sbjct: 391 QFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPD 450

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           +L    L P   +Y  +I   CK G VD A  ++ +M+ K  + D + +  L   H   G
Sbjct: 451 ELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAG 510

Query: 522 RMVEAISIFNKMLR 535
           ++  A  I N+M R
Sbjct: 511 KVAAASDILNEMAR 524



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 186/396 (46%), Gaps = 37/396 (9%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           HD+ +V FD MR+ G  P++      +++  RA     A  + ++     V M+T +YN+
Sbjct: 128 HDAARV-FDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNA 186

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           +L+  +K  +A  A  +           D ++FN +I        V+K  ++        
Sbjct: 187 MLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALY-----VRKGMQY-------- 233

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
                         +C           ++E        PD+VT+ +VI G CK G+M +A
Sbjct: 234 ------------EAMC-----------VRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEA 270

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             +  +M +  ++P  VT+  L+DG+ ++G++  A  +RE M + G +P V T++++I  
Sbjct: 271 AQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRK 330

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C +G++ +   L  EM G+ +  +  T   LIN+  K   +  A +  K++  + L   
Sbjct: 331 LCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLD 390

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            F Y  +I GFCKA  +DEA   + EM  +   P+   F+ L+ G C K      + I +
Sbjct: 391 QFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPD 450

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++++ G  PD     SLI  L K G+ + A +++ +
Sbjct: 451 ELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQ 486



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 149/314 (47%), Gaps = 5/314 (1%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P   ++ +L    S       A   F  M + G +PD      L++ L R    A  H+
Sbjct: 108 EPHVPSWLLLALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHK 167

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +  E+  ++  + +   Y +++    K     +A G+   M++ G+     +FN +I  +
Sbjct: 168 VFNEMG-RAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALY 226

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G    A  +RERM   G  PD+VT++++I G C+ G++ +  +L  +M    + P+ 
Sbjct: 227 VRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDT 286

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+T L++  C+   + +A +  ++++   +VP    YN +I   C+ G + E N +++E
Sbjct: 287 VTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSE 346

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M+ ++ + D VT   LI  +  +G M  A  +  +M+  G   D  T  +LI    K   
Sbjct: 347 MDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKE 406

Query: 558 PNEA----FRIMQR 567
            +EA    F +M R
Sbjct: 407 LDEAKEALFEMMGR 420



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 34/282 (12%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N++++ L K+    EA  +  +      +PDT T+  L+ G  RIG+V +A +   +M 
Sbjct: 254 WNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEME 313

Query: 289 SFGCSPDIVTYNTLISGLCR-----------------------------VNEVARGHELL 319
           + G  P + TYN +I  LC                              +N  A+  ++ 
Sbjct: 314 AGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMT 373

Query: 320 KEVKFK-----SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              K K     S    D  TY ++I G+CK  ++D+A     EM   G  P+   F+ L+
Sbjct: 374 SACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLV 433

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           DGF K  N  +   + + ++  G  PD   + SLI   C+ G ++   K+  +M+GK L 
Sbjct: 434 DGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLE 493

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            +   +  L  A     ++  A   L ++    +   P +YN
Sbjct: 494 VDCLVYATLAYAHLTAGKVAAASDILNEMARKQMSVTPQIYN 535



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 93/256 (36%), Gaps = 36/256 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C +G       + + M + G +P        +      GK     GLLS+ 
Sbjct: 288 TYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEM 347

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V       N+L+N+  K+ +   A  + K       Q D +T+  LI G  +  E+
Sbjct: 348 DGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKEL 407

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E  ++M   G SP+   ++ L+ G C+ N       L+ +   K    PD   Y S
Sbjct: 408 DEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNT-DAVLLIPDELIKRGLPPDKSVYRS 466

Query: 338 VISGYCK-----------------------------------LGKMDKATGIYNEMNSCG 362
           +I   CK                                    GK+  A+ I NEM    
Sbjct: 467 LIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEMARKQ 526

Query: 363 IKPSAVTFNVLIDGFG 378
           +  +   +N L   +G
Sbjct: 527 MSVTPQIYNCLCTSYG 542


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 182/348 (52%), Gaps = 36/348 (10%)

Query: 252 YFRLYSQPD--TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           +  +YS P     +F  L+ GL++I    + F  +  M   G SPD  T N L++ LC V
Sbjct: 85  HLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNV 144

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
           N V  G  ++  +  +  + PD+VTYT++I G C   ++ KA  ++  M   G  P+A+T
Sbjct: 145 NRVGEGLAVMAGI-LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAIT 203

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLS------FGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +  L+ G  + GN+  A  + + ML+        + P V+++S +ID  C++ + ++   
Sbjct: 204 YGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARD 263

Query: 424 LCDEMKGKNLS---------------------------PNVYTFTILINALCKENRLNDA 456
           L +EMK + ++                           PNV TF +LI+ LCKE ++ +A
Sbjct: 264 LFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEA 323

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +  L+ +    +VP    YN +I+GFC  G+++ A  +   M  K C+PD + +T+LI G
Sbjct: 324 KDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLING 383

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +C   ++ EA+ ++N ML++G  PD  T  +L++ L +GG   +A ++
Sbjct: 384 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 190/384 (49%), Gaps = 15/384 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL------PNSPMIEFFVSSCIRAGKCDAAK 211
           TY  +M+ LC  G       +   M +D  L      P        + +  +  + D A+
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEAR 262

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L  + +   +T +   Y SL+         +EA  +F E      QP+  TFN+LI  L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 314

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G+V +A +    M   G  P+++TYN+LI G C V ++    EL   +  K    PD
Sbjct: 315 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG-CEPD 373

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V+ YT +I+GYCK  K+++A  +YN M   G +P   T+  L+ G  + G +  A+ +  
Sbjct: 374 VICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFG 433

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M  +G   D+  +   ++G C+NG L + ++L +++K  N+  ++  F  LI+ LCK  
Sbjct: 434 VMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAG 493

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +L  A    ++L   +L P    YN +I  FC+ G V +AN++  +ME+  C PDK+T+ 
Sbjct: 494 KLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYA 553

Query: 512 ILIIGHCMKGRMVEAISIFNKMLR 535
            LI G     ++ + + + + M++
Sbjct: 554 TLIRGFFESKKLEKVVELLHMMVQ 577



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 198/403 (49%), Gaps = 25/403 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TY  +++ LC         ++F  M+  G  PN+      +    R G    A  L  + 
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227

Query: 217 ----------FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
                     F+P  ++     Y+ +++AL K    DEA  +F+E       P   ++  
Sbjct: 228 LNDSSLYGINFKPVVIS-----YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTS 282

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L+         ++A   F +M + G  P++VT+N LI  LC+  +V    +LL EV  + 
Sbjct: 283 LMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL-EVMIQR 333

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              P+++TY S+I G+C +G ++ A  ++  M S G +P  + + VLI+G+ K   +  A
Sbjct: 334 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 393

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   ML  G  PDV T+ +L+ G  + G++    KL   MK   +  ++Y + I +N 
Sbjct: 394 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 453

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK   L +A     +LK  ++      +N +IDG CKAG ++ A  +  ++ ++  +PD
Sbjct: 454 LCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPD 513

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            VT+ I+I   C  G++V+A  +F KM + GC PD IT  +LI
Sbjct: 514 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 556



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 182/392 (46%), Gaps = 32/392 (8%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L +Q R   ++      N LLN L   N   E + +     R    PD  T+  LI+GL 
Sbjct: 118 LYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLC 177

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE----- 327
               + KA   F  M   GC+P+ +TY TL+ GLCR   ++   +L +E+   S      
Sbjct: 178 MEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGIN 237

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIY---------------------------NEMNS 360
           F P V++Y+ +I   CK  + D+A  ++                           NEM +
Sbjct: 238 FKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVN 297

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G++P+ VTFNVLID   K G ++ A+ + E M+  G +P+++T++SLI+G+C  G LN 
Sbjct: 298 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 357

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             +L   M  K   P+V  +T+LIN  CK +++ +A +    +      P    Y  ++ 
Sbjct: 358 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 417

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G  + G V +A  +   M+      D   + I + G C  G + EA+ +FNK+       
Sbjct: 418 GLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKL 477

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           D    N LI  L K G    A+ + ++  +++
Sbjct: 478 DIECFNCLIDGLCKAGKLETAWELFEKLPQEE 509



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 172/349 (49%), Gaps = 9/349 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y++++ +LC+    D  + +F+ M+  G  P   +I +       +   + AK L ++ 
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPT--VISY------TSLMWEEAKRLFNEM 295

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   +N L++ L K+    EA  + +   +    P+  T+N LI+G   +G++
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M S GC PD++ Y  LI+G C+ ++V    +L   +  +    PDV TY +
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM-LQVGKRPDVKTYGA 414

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G  + GK+  A  ++  M   GI      + + ++G  K G +  A  +  ++ S+ 
Sbjct: 415 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 474

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+  F+ LIDG C+ G+L    +L +++  + L P+V T+ I+I+  C+  ++  A 
Sbjct: 475 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 534

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
              ++++ N   P    Y  +I GF ++  +++   ++  M ++    D
Sbjct: 535 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 140/290 (48%), Gaps = 1/290 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +  +  T+N+++  LC+ G     + + + M   G +PN       +      G  
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           ++A+ L               Y  L+N   K +  +EA+ ++    ++  +PD  T+  L
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 415

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G+V  A + F  M  +G   D+  Y   ++GLC+   +    EL  ++K    
Sbjct: 416 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK-SYN 474

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              D+  +  +I G CK GK++ A  ++ ++    ++P  VT+N++I  F + G +V A 
Sbjct: 475 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 534

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + ++M   G  PD +T+++LI G+  + +L + ++L   M  +++S +V
Sbjct: 535 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 2/173 (1%)

Query: 413 CRNGQLN--QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           C+ G +   Q  +    M   N +P + +FT L++ L K    +       Q++ + + P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
                N +++  C    V E   ++A +  +   PD VT+T LI G CM+ R+ +A  +F
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
            +M ++GC P+ IT  +L+  L + G  + A ++ Q    D +L   ++K  V
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVV 242


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 196/384 (51%), Gaps = 7/384 (1%)

Query: 179 FDYMRSDGHLPNSPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
           F+ M   G    +P +  +   +  C  AG+ D     L         +   ++N LL  
Sbjct: 75  FNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKG 134

Query: 236 LVKQNNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG--SFGC 292
           L      D+A+  + +    L   P+ ++  I+++GL      ++A E  + M     GC
Sbjct: 135 LCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGC 194

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P++V+Y+T+I GL +  +  + +   +E+       P+VV Y+S+I+  CK   MDKA 
Sbjct: 195 LPNVVSYSTVIDGLLKGGDPDKAYATYREM-LDRRILPNVVIYSSIIAALCKGQAMDKAM 253

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +++ M   G+ P+  T+  L+ GF   G +  A    E+M S G  P+VVT+SS +D  
Sbjct: 254 EVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYL 313

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+NG+  +  K+ D M  + L P++ T++ L++    E  L +       +  +D+ P  
Sbjct: 314 CKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDH 373

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           +++N +I    K G VDEA ++ ++M ++  KP+ VT++ LI G+C   RM  A+++F +
Sbjct: 374 YVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQE 433

Query: 533 MLRIGCAPDDITVNSLISCLLKGG 556
           M+  G +P+ IT N ++  L + G
Sbjct: 434 MVSNGVSPNFITYNIMLQGLFRTG 457



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 193/414 (46%), Gaps = 16/414 (3%)

Query: 134 DNPKLGL-KFLEFSRVNLSL-NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           DNP   + +F   +R   S+   +  TY +++   C  G  D       ++   G     
Sbjct: 66  DNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKG-FRVE 124

Query: 192 PMI--EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           P+I        C      DA   +L          + F +  +L  L  +N + EA+   
Sbjct: 125 PIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEAL--- 181

Query: 250 KEYFRLYSQ------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            E   + +       P+  +++ +I GL + G+  KA+  + +M      P++V Y+++I
Sbjct: 182 -ELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSII 240

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           + LC+   + +  E+   +  K+  +P+  TYTS++ G+C  G++ +A     +M S G+
Sbjct: 241 AALCKGQAMDKAMEVHDRM-VKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGV 299

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P+ VT++  +D   K G    A  + + M+  G  PD+ T+SSL+ GY   G L +   
Sbjct: 300 EPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHG 359

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L D M   ++ P+ Y F  LI A  K+ ++++A     +++   L P    Y+ +I+G+C
Sbjct: 360 LFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYC 419

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           K   ++ A  +  EM      P+ +T+ I++ G    GR   A   + ++++ G
Sbjct: 420 KITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSG 473



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           A V ++N   AV  F    R  +    P   T+ ILI      G +   F     +   G
Sbjct: 61  ADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKG 120

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
              + + +N L+ GLC         +++     +    P+V ++T ++ G C   +  +A
Sbjct: 121 FRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEA 180

Query: 352 TGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
             + + M  +  G  P+ V+++ +IDG  K G+   A      ML    LP+VV +SS+I
Sbjct: 181 LELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSII 240

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
              C+   +++ +++ D M    ++PN +T+T L++  C   +L +A +FL+++  N + 
Sbjct: 241 AALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVE 300

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y+  +D  CK G   EA  I   M ++  KPD  T++ L+ G+ ++G +VE   +
Sbjct: 301 PNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGL 360

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           F+ M++    PD    N+LI    K G  +EA  +  +
Sbjct: 361 FDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSK 398



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 1/207 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C  G         + M S+G  PN      F+    + G+C  A+ +    
Sbjct: 270 TYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSM 329

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+SLL+    +    E   +F    +   QPD + FN LI   ++ G+V
Sbjct: 330 VKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKV 389

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  P+ VTY+TLI+G C++  +     L +E+   +  SP+ +TY  
Sbjct: 390 DEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEM-VSNGVSPNFITYNI 448

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIK 364
           ++ G  + G+   A   Y ++   G K
Sbjct: 449 MLQGLFRTGRTATAKEFYVQIIKSGKK 475


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 231/493 (46%), Gaps = 81/493 (16%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAK 211
           + S  TY  ++  LC+ G  D+ Q +   M   G  PN       +    +A +  DA +
Sbjct: 7   DASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQ 66

Query: 212 GLLSQFRPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
            +    R G E  + T  YNSL++ L   N  D+A  + +E  R    P+  T++ L+  
Sbjct: 67  TVKRMLRSGCEPDLVT--YNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124

Query: 271 LSRIGEVKKAFEFFYDM---GS-----------FG-----CS------------------ 293
             R   + +A     +M   GS           FG     C                   
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRI 184

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           PD+VTYNT ISGLC+  ++ +G E+L+E+  +    PDVVT+ S+ISG CK  ++D A  
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMD-RGGIPPDVVTFCSIISGLCKANRIDDAFQ 243

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF----------------- 396
           ++  M   G  P ++T+++++D   +   + + + + E M +                  
Sbjct: 244 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGA 303

Query: 397 --------------------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL-SP 435
                               G LP++++++ +IDG C++G ++   KL  +M       P
Sbjct: 304 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 363

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDL-VPKPFMYNPVIDGFCKAGNVDEANVI 494
           +V  F  LI+  CK  RL+ A + L ++K  ++ VP    YN +IDG  K G++ +A ++
Sbjct: 364 DVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLL 423

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           + EM+   CKP+ VT+  LI G+   G   EA S+F++M   GC PD IT N+++S   K
Sbjct: 424 LQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSK 483

Query: 555 GGMPNEAFRIMQR 567
            GM ++A  + Q+
Sbjct: 484 AGMMSKAEGVYQQ 496



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 188/395 (47%), Gaps = 8/395 (2%)

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           D M   G +P+      F+S   +AGK D    +L +   G +      + S+++ L K 
Sbjct: 176 DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKA 235

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF--GCSPDIV 297
           N  D+A  +FK        PD+ T++I++  LSR   +    E    M +   GC  ++ 
Sbjct: 236 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVY 295

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+N  I  LCR  +      +L  +  +S   P++++Y  VI G CK G +D A  +  +
Sbjct: 296 THNAFIGALCRSGKFPLAKNILLGM-IESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 358 MNSCGI-KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY-LPDVVTFSSLIDGYCRN 415
           M   G  KP  + FN LI GF K G +  A  +   M +    +PDVVT+++LIDG  + 
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKF 414

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G L Q   L  EM+     PNV T+  LIN   K     +A     ++      P    Y
Sbjct: 415 GSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITY 474

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKR--CKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
           N V+  F KAG + +A  +  +++ K   C PD +T+ ILI G+C      + +++  +M
Sbjct: 475 NTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEM 534

Query: 534 LRIGCAPDDITVNSLISCLLKG-GMPNEAFRIMQR 567
              G + D  T N LI+ L +   +P++A  + Q+
Sbjct: 535 TARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQ 569



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 180/385 (46%), Gaps = 41/385 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++  LC+    D    VF  M   G +P+S      + +  RA + D    +L   
Sbjct: 224 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHM 283

Query: 218 RPGEV--TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +  +    M  + +N+ + AL +      A  +        S P+  ++N +I GL + G
Sbjct: 284 QAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSG 343

Query: 276 EVKKAFEFFYDMGSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            V  A++    M   GC  PD++ +NTLISG C+   +++ H+LL E+K K+   PDVVT
Sbjct: 344 NVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVT 403

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G  K G + +A  +  EM + G KP+ VT+  LI+G+ K G    AE + + M 
Sbjct: 404 YNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMS 463

Query: 395 SFGYLPDVVTFSS-------------------------------------LIDGYCRNGQ 417
           + G  PD++T+++                                     LIDGYCR   
Sbjct: 464 AKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAED 523

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL-NDARRFLKQLKWNDLVPKPFMYN 476
             QGL L  EM  +  S + YT+ +LI  L +   + + A    +Q+   D VP   ++N
Sbjct: 524 TEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFN 583

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEK 501
            ++  F + G+V+ A  +V EM EK
Sbjct: 584 SLVRLFLRTGDVNSARSMVQEMNEK 608



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 192/426 (45%), Gaps = 40/426 (9%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M ++G+  +       +    ++G  DAA+ LL +        +   Y +L++ L K   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
             +A+   K   R   +PD  T+N LI GL     +  A     ++   G +P+ +TY+T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFS-------------------------------- 329
           L+   CR   + +   L++E+  +                                    
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 330 ----PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PDVVTY + ISG CK GK+DK   +  EM+  GI P  VTF  +I G  K   +  
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS--PNVYTFTIL 443
           A  + + ML  G +PD +T+S ++D   R  +L+   ++ + M+         VYT    
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKR 502
           I ALC+  +   A+  L  +  +  +P    YN VIDG CK+GNVD+A  +  +M +   
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKM-LRIGCAPDDITVNSLISCLLKGGMPNEA 561
           CKPD + F  LI G C  GR+ +A  +  +M  +  C PD +T N+LI    K G   +A
Sbjct: 361 CKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQA 420

Query: 562 FRIMQR 567
             ++Q 
Sbjct: 421 KLLLQE 426


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 173/325 (53%), Gaps = 4/325 (1%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           + N+ ++ + K  + ++   +F++       PD  +++ILI GL++ G+ ++    F+ M
Sbjct: 26  LLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM 85

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G + D   YN ++ G C+  +V + +E L+E+K K    P V TY S+I G  K+ +
Sbjct: 86  KQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVK-HVPPTVATYGSIIDGLAKIDR 144

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D+A  ++ E  S GI+ + + ++ LIDGFGKVG +  A  + E M+  G  P+V T++S
Sbjct: 145 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNS 204

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L+D   +  ++N+ L     MK    SPN YT++ILIN LC+  + N A  F ++++   
Sbjct: 205 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 264

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           LVP    Y  +I G  K GN+ +A  +    +     PD  +F  LI G     R +EA 
Sbjct: 265 LVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAY 324

Query: 528 SIFNKMLRIGCAPDDITVNSLISCL 552
            +F +    GC    I V + IS L
Sbjct: 325 HVFEETRLRGC---RINVKACISLL 346



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 167/319 (52%), Gaps = 1/319 (0%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +FKE  R   QPD    N  +  + + G+V+K    F D+  +G  PD+ +Y+ LI GL 
Sbjct: 11  IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  +      +   +K +  F+ D   Y +V+ G+CK GK+DKA     EM    + P+ 
Sbjct: 71  KAGQARETSSIFHAMKQRG-FALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTV 129

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T+  +IDG  K+  +  A  + E   S G   +V+ +SSLIDG+ + G++++   + +E
Sbjct: 130 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 189

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  K L+PNVYT+  L++AL K   +N+A    + +K     P  + Y+ +I+G C+   
Sbjct: 190 MMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 249

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            ++A V   EM+++   P+ VT+T +I G    G + +A S+F +    G  PD  + N+
Sbjct: 250 YNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNA 309

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           LI  +       EA+ + +
Sbjct: 310 LIEGMSHANRAIEAYHVFE 328



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 150/293 (51%), Gaps = 1/293 (0%)

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  +   + F +M   GC PD+   NT +  + +  +V +G  + +++K    F PDV +
Sbjct: 3   GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYG-FLPDVRS 61

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G  K G+  + + I++ M   G    A  +N ++DGF K G +  A    E M 
Sbjct: 62  YSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMK 121

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                P V T+ S+IDG  +  +L++   L +E K K +  NV  ++ LI+   K  R++
Sbjct: 122 VKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRID 181

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A   L+++    L P  + +N ++D   KA  ++EA +    M+E +C P+  T++ILI
Sbjct: 182 EAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILI 241

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            G C   +  +A   + +M + G  P+ +T  ++IS L K G   +A  + +R
Sbjct: 242 NGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFER 294



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 150/303 (49%), Gaps = 7/303 (2%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++Y++++  L + G       +F  M+  G   ++      V    ++GK D A   L +
Sbjct: 60  RSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEE 119

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   V  +   Y S+++ L K +  DEA  +F+E      + +   ++ LI G  ++G 
Sbjct: 120 MKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 179

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG---HELLKEVKFKSEFSPDVV 333
           + +A+    +M   G +P++ T+N+L+  L +  E+       + +KE+K     SP+  
Sbjct: 180 IDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKC----SPNTY 235

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+ +I+G C++ K +KA   + EM   G+ P+ VT+  +I G  KVGN+  A  + ER 
Sbjct: 236 TYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERF 295

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + G +PD  +F++LI+G     +  +   + +E + +    NV     L++AL K   +
Sbjct: 296 KANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECI 355

Query: 454 NDA 456
             A
Sbjct: 356 EQA 358



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 153/341 (44%), Gaps = 1/341 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N  M  + + G  +  + +F+ ++  G LP+       +    +AG+      +    + 
Sbjct: 28  NTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQ 87

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
               +    YN++++   K    D+A    +E    +  P   T+  +I GL++I  + +
Sbjct: 88  RGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDE 147

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A+  F +  S G   +++ Y++LI G  +V  +   + +L+E+  K   +P+V T+ S++
Sbjct: 148 AYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM-MKKGLAPNVYTWNSLM 206

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
               K  ++++A   +  M      P+  T+++LI+G  +V     A    + M   G +
Sbjct: 207 DALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLV 266

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+VVT++++I G  + G +     L +  K     P+  +F  LI  +   NR  +A   
Sbjct: 267 PNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHV 326

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            ++ +             ++D   KA  +++A V+ A + E
Sbjct: 327 FEETRLRGCRINVKACISLLDALNKAECIEQAAVVGAVLRE 367



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 111/225 (49%)

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G+ +    I+ EMN  G +P     N  +D   K G++     + E +  +G+LPDV ++
Sbjct: 3   GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S LI G  + GQ  +   +   MK +  + +   +  +++  CK  +++ A   L+++K 
Sbjct: 63  SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             + P    Y  +IDG  K   +DEA ++  E + K  + + + ++ LI G    GR+ E
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 182

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           A  I  +M++ G AP+  T NSL+  L+K    NEA    Q   E
Sbjct: 183 AYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKE 227



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 65/154 (42%)

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           +G+   G K+  EM  +   P++      ++ + K   +   R   + +K    +P    
Sbjct: 2   HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 61

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +I G  KAG   E + I   M+++    D   +  ++ G C  G++ +A     +M 
Sbjct: 62  YSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMK 121

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
                P   T  S+I  L K    +EA+ + + A
Sbjct: 122 VKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA 155


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 183/358 (51%), Gaps = 27/358 (7%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           ++LLN L++    ++ + +F +      QPD + ++ +++ L  + +  KA E  + M  
Sbjct: 100 SALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEF 159

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHE--------------------------LLKEVK 323
             C   IV YN LI GLC+   +    E                          L KE+ 
Sbjct: 160 NQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMG 219

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K     + +TY+ +I  +C+ G+MD A G  ++M    I+ +   +N LI+G+ K+GN 
Sbjct: 220 EKG-LCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNA 278

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            +A+Y  + M+  G  P VVT++SLI GYC  G+ ++  K+ +EM  K +SPN YTFT +
Sbjct: 279 SAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAI 338

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LC+ N + +A R   ++K   ++P    YN +I+G C++GN+ EA  ++ EM  K  
Sbjct: 339 ISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGF 398

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            PD  T+  LI G C  GR+ EA    + + +     +++  ++L+    K G   +A
Sbjct: 399 VPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDA 456



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 203/448 (45%), Gaps = 35/448 (7%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S+  +   YN ++   C++G   + +  FD M   G  P        +S     G+   A
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             + ++     ++ +T+ + ++++ L + N   EA+ +F E       P   T+N++I+G
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEG 376

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             R G + +AF    +M   G  PD  TY  LISGLC V  V+   E + ++  K     
Sbjct: 377 HCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLH-KDHHKL 435

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           + + Y++++ GYCK G+   A      M   G+    V + +LIDG  +  +  +   + 
Sbjct: 436 NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLL 495

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + M + G  PD V ++++ID + + G L +   L D M  +   PNV T+T LIN LCK 
Sbjct: 496 KEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKA 555

Query: 451 NRLNDARRFLKQLKWNDLVP-----------------------------KPFM-----YN 476
             ++ A    K+   +D+ P                             K F+     YN
Sbjct: 556 GLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYN 615

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I GFC+ G ++EA  ++  M +    PD +T++ +I   C +  + EAI +++ ML  
Sbjct: 616 ILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDK 675

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G  PD +  + L+      G   +AF +
Sbjct: 676 GLKPDTLAYSFLVHGCCIAGELEKAFEL 703



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 198/438 (45%), Gaps = 45/438 (10%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ V+RSLCE+   +  + +  +M       N   +   V + +  G C + +     + 
Sbjct: 134 YSAVVRSLCELKDFNKAKEMIHWMEF-----NQCKLSIVVYNVLIHGLCKSRR----IWE 184

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             E+           N +      +EA  +FKE        +  T++ILI    R GE+ 
Sbjct: 185 ALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMD 244

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A  F   M        +  YN+LI+G C++   +       E+  K   +P VVTYTS+
Sbjct: 245 NAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG-LTPTVVTYTSL 303

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ISGYC  G+  KA  +YNEM + GI P+  TF  +I G  +   M  A  +   M     
Sbjct: 304 ISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKI 363

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P  VT++ +I+G+CR+G +++   L DEM GK   P+ YT+  LI+ LC   R+++A+ 
Sbjct: 364 MPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKE 423

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA----NVIVA------------------ 496
           F+  L  +        Y+ ++ G+CK G   +A     V+V                   
Sbjct: 424 FVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTA 483

Query: 497 -------------EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
                        EM     +PD V +T +I  H   G + EA  +++ M+  GC P+ +
Sbjct: 484 REHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVV 543

Query: 544 TVNSLISCLLKGGMPNEA 561
           T  +LI+ L K G+ ++A
Sbjct: 544 TYTALINGLCKAGLMDKA 561



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 132/315 (41%), Gaps = 33/315 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC +G     +   D +  D H  N+      V    + G+   A       
Sbjct: 404 TYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVM 463

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V M    Y  L++   ++++      + KE      +PD   +  +I   S+ G +
Sbjct: 464 VERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNL 523

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR----------------------------- 308
           K+AF  +  M   GC P++VTY  LI+GLC+                             
Sbjct: 524 KEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCF 583

Query: 309 VNEVARGHELLKEVKFKSE----FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           ++ + RG  + K V+        F    V+Y  +I G+C+LGK+++AT + + M    I 
Sbjct: 584 LDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDIL 643

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  +T++ +I    K  N+  A  +   ML  G  PD + +S L+ G C  G+L +  +L
Sbjct: 644 PDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703

Query: 425 CDEMKGKNLSPNVYT 439
            DEM  + +  N  T
Sbjct: 704 RDEMIRRGMRSNHVT 718



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           MK  NL P V T + L+N L +  R ND       +   ++ P  ++Y+ V+   C+  +
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            ++A  ++  ME  +CK   V + +LI G C   R+ EA+ I N +++ G   + +T
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVT 203


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 204/436 (46%), Gaps = 29/436 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+NL++ +LCEMG  ++ + VFD M   G  PN   +   V    RAG       LL + 
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R      +   YN+++++L  +    EA  + ++   +   PD  TFN  I  L + G++
Sbjct: 215 RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQI 274

Query: 278 KKAFEFFYDMG---SFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            +A   F DM      G   P+ VTYN ++ G C          +   +K     S  + 
Sbjct: 275 LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLS--LR 332

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y   + G  + GK+ +A  I NEM    IKP+  ++N+L+ G  K G    A  +   M
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  PD VT+S+L+ GYCR G++ +   +  EM      PN+YT  IL+++L KE R 
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--------------- 498
           ++A   L+ +            N +I+G CKAGN+D+A  IV+ M               
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 499 --------EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
                     K+C PD +T+  +I G C  GR+ EA     +M+    +PD +  ++ I 
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIY 572

Query: 551 CLLKGGMPNEAFRIMQ 566
              K G  + AFR+++
Sbjct: 573 NYCKQGKLSSAFRVLK 588



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 214/411 (52%), Gaps = 10/411 (2%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF---VSSCIRAGKCDAAKGLLSQFR 218
           ++R+L ++GL ++    F  +R D    + P I F+       ++  + D    L     
Sbjct: 87  LVRTLADLGLLENAISQFRSLR-DRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +V   T+ +N L++AL +    + A  +F +      +P+ ++  IL++G  R G   
Sbjct: 146 VAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              +   +M S G  P+ V YNT+IS LC   +     +L+++++ +   SPD+VT+   
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMR-EVGLSPDIVTFNCR 264

Query: 339 ISGYCKLGKMDKATGIYNEMN---SCGI-KPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           I+  CK G++ +A+ I+ +M      G+ KP+ VT+N++++GF   G    A  + + M 
Sbjct: 265 IAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMK 324

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +   L  + +++  + G  R+G+L +   + +EM  KN+ PN+Y++ IL++ LCK    +
Sbjct: 325 NSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DAR  L  ++ + + P    Y+ ++ G+C+ G + EAN ++ EM +  C P+  T  IL+
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILL 443

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                +GR  EA  +   M   G   D++T N++I+ L K G  ++A  I+
Sbjct: 444 HSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIV 494



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 183/441 (41%), Gaps = 58/441 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++  LC+ G+    + +   MR  G  P++      +    R GK   A  +L + 
Sbjct: 368 SYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREM 427

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + +  N LL++L K+  A EA  + +         D  T N +I GL + G +
Sbjct: 428 IQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNL 487

Query: 278 KKAFEFFYDMGSFG-----------------------CSPDIVTYNTLISGLCRVNEVAR 314
            KA E    M + G                       C PD +TY T+I GLC+V  V  
Sbjct: 488 DKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDE 547

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             + L E+  K + SPD + + + I  YCK GK+  A  +  EM   G   S  T+N LI
Sbjct: 548 AKKKLLEMIGK-KLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G G    +     + + M   G  P+V T++++I      G+L     L DEM  K +S
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGIS 666

Query: 435 PNVYTFTILINALCKENRLNDARRF-------------LKQLKWNDLVP----------- 470
           PN+YTF ILI A  K      A+               L    +N+L+            
Sbjct: 667 PNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELF 726

Query: 471 ----------KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
                     K F+Y  +I+  CK G +D+A+ I+ +M +K+   D  +F  +I     +
Sbjct: 727 EAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKR 786

Query: 521 GRMVEAISIFNKMLRIGCAPD 541
           G    A     +M+ +    D
Sbjct: 787 GSKHAADEFAERMMEMASETD 807



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 191/440 (43%), Gaps = 23/440 (5%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S ++YN+ M  L   G      ++ + M      PN       V    + G    A+ +L
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              R   V   T  Y++LL+   ++    EA Y+ +E  ++   P+ +T NIL+  L + 
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS----- 329
           G   +A +    M   G   D VT NT+I+GLC+   + +  E++  +  +   S     
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLG 509

Query: 330 -----------------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                            PD +TY ++I G CK+G++D+A     EM    + P ++ F+ 
Sbjct: 510 NSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDT 569

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
            I  + K G + SA  + + M   G    + T++SLI G     Q+ +   L DEMK + 
Sbjct: 570 FIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERG 629

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           + PNVYT+  +I+ L +  +L DA   L ++    + P  + +  +I  F KA +   A 
Sbjct: 630 IFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQ 689

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  E+    C   +  ++ +       G  ++A  +F   L    A  +     LI  L
Sbjct: 690 ELF-EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKL 748

Query: 553 LKGGMPNEAFRIMQRASEDQ 572
            K G  ++A  I+ +  + Q
Sbjct: 749 CKDGKLDDASFILHKMMDKQ 768



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 5/215 (2%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLI-DGYCRNGQLNQGL 422
           PS  +    +   G + N +S    +R+R   F + P  ++F +L+     +  +++  +
Sbjct: 82  PSGFSLVRTLADLGLLENAISQFRSLRDR---FPHDPPPISFYNLLFRCSLKESRVDCVI 138

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  +M    + P  YTF +LI+ALC+   L +AR    ++      P  F    ++ G+
Sbjct: 139 WLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGY 198

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+AG       ++ EM      P++V +  +I   C +G+ VEA  +  KM  +G +PD 
Sbjct: 199 CRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDI 258

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           +T N  I+ L K G   EA RI +    D+ + LP
Sbjct: 259 VTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLP 293


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 229/447 (51%), Gaps = 19/447 (4%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF-DYMRSDGH 187
           + K  ++P+L L+F ++     S+ HS ++  +V+  L     +D    +  + M  +G 
Sbjct: 14  ICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFIMGNLMNVNGI 73

Query: 188 LP---------------NSPMI-EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
            P               +SP + +  V +C + G  + A  ++++ +     ++   +N+
Sbjct: 74  SPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNN 133

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
            L+ L+K N+ +    M+KE        +  TFN++I  L + G + +A    Y     G
Sbjct: 134 FLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTG 193

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMD 349
             P++VT+N +I G  ++  +    +L+++++  S  S  PD VTY S ++G+CK+G + 
Sbjct: 194 IWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLA 253

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A     EM    I+P+  T+  L+DG+ +VG++ +A  + + ++  G LP+ V ++S+I
Sbjct: 254 VAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSII 313

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
                 G +     L  +M  K + P+ +T++I+I  LC+   LN+A +FL+ +    LV
Sbjct: 314 HWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLV 373

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
              F +N VI+  C++ N+  A  ++A M  +   PD VTF  LI  HC  G++  AI +
Sbjct: 374 RDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQV 433

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGG 556
           + KM++ G  P+ +  NS+I+   K G
Sbjct: 434 YEKMIKTGEKPNLLIYNSVINGFAKEG 460



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 192/416 (46%), Gaps = 17/416 (4%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+NL++ +L + G L ++V V++  +++ G  PN       +   I+ G  D A  L+ +
Sbjct: 165 TFNLIIYALGKEGRLVEAVSVIYRSLKT-GIWPNVVTFNMIIDGAIKMGAMDLALKLVRK 223

Query: 217 F--------RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
                    +P  VT     YNS +N   K  N   A    KE      +P+  T+  L+
Sbjct: 224 MEVMSGCSVKPDSVT-----YNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLV 278

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G +R+G ++ AF    ++   G  P+ V YN++I  L    ++  G  LL         
Sbjct: 279 DGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDM-EGASLLLSDMIDKRI 337

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD  TY+ VI G C+ G +++A      +    +   A + NV+I+   +  N+  A+ 
Sbjct: 338 YPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQ 397

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M   G +PDVVTF +LID +C++G++   +++ ++M      PN+  +  +IN   
Sbjct: 398 LLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFA 457

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           KE   + A   +  L+   L      YN +I G+C  G +D+A  + +EM         V
Sbjct: 458 KEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHV 516

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T+  LI   C  G +++A  +   M+  G  PD +T   LI+   K   P E   +
Sbjct: 517 TYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIEL 572



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 177/358 (49%), Gaps = 2/358 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN  +   C++G     +     M      PN       V    R G  + A  L  + 
Sbjct: 238 TYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDEL 297

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  ++ +YNS+++ L  + + + A  +  +       PD +T++I+I+GL R G +
Sbjct: 298 VEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYL 357

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF+F   +       D  ++N +I+ LCR N +A   +LL  +  +    PDVVT+ +
Sbjct: 358 NEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRG-LVPDVVTFGT 416

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK GK++ A  +Y +M   G KP+ + +N +I+GF K G+   A  + + +   G
Sbjct: 417 LIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMG 476

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            L DVVT+++LI GYC  G+++Q   L  EM+   +  +  T+  LIN+LCK   +  A+
Sbjct: 477 -LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAK 535

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
             +K +    L+P    Y  +I  F K  + +E   +   M  K   PD+ T+  ++I
Sbjct: 536 ELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVI 593



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 149/306 (48%), Gaps = 9/306 (2%)

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + G+S + EV  A    YD+    C      ++ L+    ++      +E++ +++    
Sbjct: 70  VNGISPL-EVLDALISSYDI----CKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDG- 123

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F   V  + + +S   KL  +++   +Y EM S G   +  TFN++I   GK G +V A 
Sbjct: 124 FWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAV 183

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK---GKNLSPNVYTFTILI 444
            +  R L  G  P+VVTF+ +IDG  + G ++  LKL  +M+   G ++ P+  T+   +
Sbjct: 184 SVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFV 243

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           N  CK   L  A  F K++   ++ P    Y  ++DG+ + G+++ A  +  E+ EK   
Sbjct: 244 NGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLL 303

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P+ V +  +I    M+G M  A  + + M+     PD  T + +I  L + G  NEAF+ 
Sbjct: 304 PNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKF 363

Query: 565 MQRASE 570
           +Q   E
Sbjct: 364 LQMILE 369



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 138/292 (47%), Gaps = 2/292 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  L   G  +   ++   M      P+       +    R G  + A   L    
Sbjct: 309 YNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMIL 368

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    F +N ++N L + NN   A  +    +     PD  TF  LI    + G+V+
Sbjct: 369 EMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVE 428

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A + +  M   G  P+++ YN++I+G  +         L+  ++    F  DVVTY ++
Sbjct: 429 NAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF--DVVTYNTL 486

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYC  GK+D+A  +++EM + GI  S VT+N LI+   K G+++ A+ + + M+  G 
Sbjct: 487 IHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGL 546

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           +PD VT++ LI  + +     + ++L D M  K + P+  T+  ++  L +E
Sbjct: 547 IPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQE 598



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 1/154 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN V+    + G  D   ++ D +R  G L +       +      GK D A  L S+ R
Sbjct: 449 YNSVINGFAKEGSFDPAILLIDTLRRMG-LFDVVTYNTLIHGYCNCGKIDQAFALFSEMR 507

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  S   YN+L+N+L K  +  +A  + K        PD  T+ ILI   S+    +
Sbjct: 508 NSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPE 567

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
           +  E    M   G  PD  TY T++  L +   V
Sbjct: 568 EVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESV 601


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 204/440 (46%), Gaps = 37/440 (8%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +M+  C  G   S  V+ + +   G +PN       +  C + G  + A    S+ +   
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 328

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +  S +  NS+L   +K  +   A  MF +        + +TFN L+  L + G++ +A 
Sbjct: 329 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALE-SGLANVFTFNTLLSWLCKEGKMNEAC 387

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             + ++ + G SP++V+YN +I G CR + +    ++ KE+   + F+P+ VT+T ++ G
Sbjct: 388 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM-LDNGFTPNAVTFTILMDG 446

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVT-------------------------------- 369
           Y K G ++ A  I++ M    I P+  T                                
Sbjct: 447 YFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPT 506

Query: 370 ---FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
              +N +IDGF K GN+  A  +   M   G  P  VT++SLIDG+C+   ++  LKL +
Sbjct: 507 CMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLN 566

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +MK K L  ++  +  LI+  CK   +  A   L +L+   L P  F+YN +I GF    
Sbjct: 567 DMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN 626

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           NV+EA  +  +M  +    D  T+T LI G    GR++ A  I  +ML  G  PDD    
Sbjct: 627 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 686

Query: 547 SLISCLLKGGMPNEAFRIMQ 566
            LI+ L   G    A +I++
Sbjct: 687 VLINGLCNKGQFENARKILE 706



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 205/450 (45%), Gaps = 10/450 (2%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           ++ R  +P   LK+ E  +  +          +++  L         Q +FD   S   +
Sbjct: 88  LLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQYLFDQFASGKSV 147

Query: 189 PNSPMIEFFVSSC--------IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
             S +++  V           I+ G    A+    Q +   V +    Y+  ++ L  + 
Sbjct: 148 RFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKP 207

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           N+  A+ + +E       P   TF  +I    + G V +A     DM + G S ++    
Sbjct: 208 NSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVAT 267

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           +L+ G C    +     L+ E+  +S   P+ VTY+ +I G CK G ++KA   Y+EM +
Sbjct: 268 SLMKGYCMQGNLRSALVLVNEIS-ESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKT 326

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            GI+ S  + N +++G+ K  +  +A  M    L  G L +V TF++L+   C+ G++N+
Sbjct: 327 KGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNE 385

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              L DE+  K +SPNV ++  +I   C+++ +N A +  K++  N   P    +  ++D
Sbjct: 386 ACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMD 445

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+ K G+++ A  I   M++    P   T  I+I G C  GR  E   +FNK +  G  P
Sbjct: 446 GYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVP 505

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +  N++I   +K G  N A  + +   E
Sbjct: 506 TCMPYNTIIDGFIKEGNINLASNVYREMCE 535



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 183/398 (45%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ G  +    ++D + + G  PN       +    R    +AA  +  + 
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 428

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   +  L++   K+ + + A  +F         P   T  I+I+GL + G  
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +  + F    S G  P  + YNT+I G  +   +     + +E+  +   +P  VTYTS
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM-CEVGITPSTVTYTS 547

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK   +D A  + N+M   G+K     +  LIDGF K  +M SA  +   +   G
Sbjct: 548 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 607

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+   ++S+I G+     + + + L  +M  + +  ++ T+T LI+ L K  RL  A 
Sbjct: 608 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYAS 667

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    ++P    +  +I+G C  G  + A  I+ +M  K   P  + +  LI GH
Sbjct: 668 DIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGH 727

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             +G + EA  + ++ML  G  PD+IT + L++   KG
Sbjct: 728 FKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 765



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 51/123 (41%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +    KTY  ++  L + G       +   M S G LP+       ++     G+ 
Sbjct: 639 VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQF 698

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A+ +L       +  S  +YN+L+    K+ N  EA  +  E       PD  T++IL
Sbjct: 699 ENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDIL 758

Query: 268 IQG 270
           + G
Sbjct: 759 VNG 761


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  VMR LC          +   M++ G   +       +     A + DAA  LL + 
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  +Y+ LL    +     +   +F++  R   +PD   F  LI  L + G+ 
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA +    M   G  P++VTYN LI+ LC+   V     L KE+  K   +PDVVTY +
Sbjct: 245 GKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKG-VAPDVVTYNT 303

Query: 338 VISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +I+G   + +MD+A     EM      ++P  VTFN +I G  K+G M  A  +RE M  
Sbjct: 304 LIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAE 363

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G + ++VT++ LI G+ R  ++   + L DE+    L P+ +T++ILIN   K   ++ 
Sbjct: 364 RGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDR 423

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +FL  ++   +  + F Y P++   C+ G ++ A  +  EM +K C  D + ++ +I 
Sbjct: 424 AEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIH 482

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           G C  G M     +   ML  G APD +T + LI+   K G   EA R++++ +
Sbjct: 483 GACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMT 536



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 202/416 (48%), Gaps = 14/416 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC------DAAK 211
           TY  ++R LC+    D+   + D M   G  PN       V SC+  G C      D  K
Sbjct: 160 TYGTLIRGLCDASELDAALELLDEMCGSGVQPN-----VVVYSCLLRGYCRSGRWQDVGK 214

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
                 R G +     M+  L++ L K+    +A  +     +   +P+  T+N+LI  L
Sbjct: 215 VFEDMSRRG-IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSL 273

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSP 330
            + G V++A     +M   G +PD+VTYNTLI+GL  V E+      L+E ++  +   P
Sbjct: 274 CKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEP 333

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DVVT+ SVI G CK+G+M +A  +   M   G   + VT+N LI GF +V  +  A  + 
Sbjct: 334 DVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLM 393

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           + +   G  PD  T+S LI+G+ +  ++++  K    M+ + +   ++ +  L+ A+C++
Sbjct: 394 DELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQ 453

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             +  A     ++  N  +     Y+ +I G CK+G++     ++ +M ++   PD VT+
Sbjct: 454 GMMERAMGLFNEMDKNCGL-DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTY 512

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           ++LI  +   G + EA  +  +M   G  PD    +SLI      G  ++  +++ 
Sbjct: 513 SMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIH 568



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 148/282 (52%), Gaps = 6/282 (2%)

Query: 295 DIVTYNTLISGLCRV--NEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDK 350
           D V+YNT+++ LCR   + + +   LL ++  ++  +  P+ V+YT+V+ G C   +  +
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +   M + G++   VT+  LI G      + +A  + + M   G  P+VV +S L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           GYCR+G+     K+ ++M  + + P+V  FT LI+ LCKE +   A +    +    L P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               YN +I+  CK G+V EA  +  EM++K   PD VT+  LI G      M EA+S  
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 531 NKMLR--IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +M++      PD +T NS+I  L K G   +A ++ +  +E
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAE 363



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 41/334 (12%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  +  TYN+++ SLC+ G       +   M   G  P+       ++      + 
Sbjct: 255 VQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEM 314

Query: 208 DAAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNADEAV------------------- 246
           D A   L +   G+  +      +NS+++ L K     +AV                   
Sbjct: 315 DEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYN 374

Query: 247 YMFKEYFRLYS----------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           Y+   + R++                 +PD++T++ILI G S++ EV +A +F   M   
Sbjct: 375 YLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQR 434

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   ++  Y  L++ +C+   + R   L  E+        D + Y+++I G CK G M  
Sbjct: 435 GIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTMIHGACKSGDMKT 492

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
              +  +M   G+ P AVT+++LI+ + K+G++  AE + ++M + G++PDV  F SLI 
Sbjct: 493 VKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIK 552

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLS--PNVYTFTI 442
           GY   GQ ++ LKL  EM+ KN++  P + +  I
Sbjct: 553 GYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 210/450 (46%), Gaps = 5/450 (1%)

Query: 128 EVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           +++ R  +P     FL  S    +      T+N ++ +L   G    +  +F  MR    
Sbjct: 103 KLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASV 162

Query: 188 LPNSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPG-EVTMSTFMYNSLLNALVKQNNADEA 245
            P+       ++   +AG   DA K L     PG +V     + N++++ L K     +A
Sbjct: 163 KPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDA 222

Query: 246 VYMFKEYFRLYS--QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           +    E  R      P+T T+N L     R+G++  A +    M   G +P+++T NT++
Sbjct: 223 IVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIV 282

Query: 304 SGLCRVNEVARGHELLKEVKFK-SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
            GLCRV  V    +  +E +    E   + VTY++++S +     +  A  +++EM   G
Sbjct: 283 GGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQG 342

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P AV +  +I G  + G +V A  +   M   G+  D   ++ LI G+CR  +L++  
Sbjct: 343 YPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAH 402

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L +EMKG  L P+VYT+  L++ LCK    +     L  +  +   P    +  ++ G+
Sbjct: 403 QLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGY 462

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CKAG  DEA  I   M E R +P+ V +  LI   C    +  AI +F++M       + 
Sbjct: 463 CKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANV 522

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            T N+L+  L    MP +AF +M +  E++
Sbjct: 523 TTYNALLKGLQDKNMPEKAFELMDQMKEER 552



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 176/359 (49%), Gaps = 5/359 (1%)

Query: 160 NLVMRSLCEMG-LHDSVQVVFDYMRS-DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           N V+  LC++G L D++  V + MR   G  PN+        +C R G  D A  ++ + 
Sbjct: 207 NTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERM 266

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR--LYSQPDTWTFNILIQGLSRIG 275
               VT +    N+++  L +      A+  F+E     L ++ +  T++ L+       
Sbjct: 267 EKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCN 326

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V  A E F++M   G  PD V Y T+ISGL +   +     +   +K K+ F  D   Y
Sbjct: 327 NVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMK-KAGFKLDRKAY 385

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I G+C+  ++ +A  ++ EM   G++P   T+N L+    K G+  + + +   M+ 
Sbjct: 386 NILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMID 445

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P VVTF +L+ GYC+ G+ ++ LK+   M    + PN   +  LI+ LCK   ++ 
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDV 505

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           A +   +++ N++      YN ++ G       ++A  ++ +M+E+RC PD VT  +L+
Sbjct: 506 AIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLM 564


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 204/420 (48%), Gaps = 2/420 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F  ++ +     E+G+ +     F  M      P +     F+    + GK D +     
Sbjct: 182 FGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFR 241

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                 +  S F YN ++  + K+ +   A  +F +  ++   PD  T+N LI G  ++G
Sbjct: 242 DMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLG 301

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            + ++F  F +M   GC PD++TYN LI+  C+  ++ +    L E+K  S   P+VVTY
Sbjct: 302 LLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMK-NSGLKPNVVTY 360

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +++I   CK   + +A     +M   G+ P+  T+  LID   K G +  A  + + ML 
Sbjct: 361 STLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQ 420

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                +VVT+++L+DG C+ G++ +   L   M    ++PN+ T+T L++   K  R+ +
Sbjct: 421 VQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVEN 480

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   LK++K   + P   +Y  +I G C    ++E   +++EM+    + + V +TI + 
Sbjct: 481 ALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMD 540

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +   G+ VEA+++  +M  +G     +T   LI  L K G+  EA     R + D NLQ
Sbjct: 541 AYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMA-DFNLQ 599



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 194/373 (52%), Gaps = 3/373 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G    AK L  Q +   +T     YNSL++   K    DE+  +F+E   +  +PD  
Sbjct: 264 KEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVI 323

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+N LI    +  ++ KAF F ++M + G  P++VTY+TLI  LC+ + + +  + L ++
Sbjct: 324 TYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDM 383

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           + +   SP+  TYTS+I   CK G +  A  + +EM    +  + VT+  L+DG  K G 
Sbjct: 384 R-RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGR 442

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M+ AE +   M+  G  P++ T+++L+ G+ +N ++   L+L  E+K K + P++  +  
Sbjct: 443 MMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGT 502

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I  LC +N+L +    + ++K   +     +Y   +D + K G   EA  ++ EM +  
Sbjct: 503 IIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLG 562

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV-NSLISCLLKGGMPNEA 561
            +   VTF +LI G C KG + EAI  F +M      P+++ V  +LI  L K      A
Sbjct: 563 VEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAA 622

Query: 562 FRIMQRASEDQNL 574
            ++     +D+N+
Sbjct: 623 KKLFDEM-QDKNM 634



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 207/451 (45%), Gaps = 72/451 (15%)

Query: 114 ARYLCEKLSPLNSLEVIKRL-DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLH 172
            R++   L P+    V+  L  +PKL LKF  +++       + ++Y L++  L      
Sbjct: 86  VRFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKFGFCLTTESYCLLVHIL------ 139

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF----- 227
                 +  M  D +        FF+   I      +++ +L  F   EV  ST      
Sbjct: 140 -----FYARMYFDAN--------FFLKELI------SSRRILPGFDVFEVLWSTRNVCVP 180

Query: 228 ---MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
              ++++L +  ++    +EA   F    R    P   + N  +  L++ G+   + +FF
Sbjct: 181 GFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFF 240

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY-C 343
            DM   G +  + TYN +I                                     GY C
Sbjct: 241 RDMVGAGIAQSVFTYNIMI-------------------------------------GYMC 263

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G M  A  ++++M   G+ P  VT+N LIDG+GK+G +  +  + E M   G  PDV+
Sbjct: 264 KEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVI 323

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T+++LI+ +C+  Q+ +      EMK   L PNV T++ LI+ALCKE+ L  A +FL  +
Sbjct: 324 TYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDM 383

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +   L P  F Y  +ID  CKAG + +A  +  EM + +   + VT+T L+ G C +GRM
Sbjct: 384 RRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRM 443

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +EA  +F  M++ G  P+  T  +L+   +K
Sbjct: 444 MEAEDLFRAMIKAGVTPNLKTYTALVHGHIK 474



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 197/428 (46%), Gaps = 13/428 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+             M++ G  PN       + +  +      A   L   
Sbjct: 324 TYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDM 383

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   ++ + F Y SL++A  K     +A+ +  E  ++    +  T+  L+ GL + G +
Sbjct: 384 RRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRM 443

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M   G +P++ TY  L+ G  + N+       L +   + +  PD++ Y +
Sbjct: 444 MEAEDLFRAMIKAGVTPNLKTYTALVHGHIK-NKRVENALELLKEIKEKKIKPDLLLYGT 502

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   K+++   + +EM +CGI+ ++V + + +D + K G  V A  + + M   G
Sbjct: 503 IIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLG 562

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN-VYTFTILINALCKENRLNDA 456
               +VTF  LIDG C+ G + + +     M   NL PN V   T LI+ LCK N +  A
Sbjct: 563 VEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAA 622

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++   +++  ++VP    Y  +IDG  K  +  EA  I + M E   + D   +T L+ G
Sbjct: 623 KKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWG 682

Query: 517 HCMKGRMVEAISIF-NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---------MQ 566
              +G +V+   +F N+M+  G  PD+I    L+    + G  +EA  +         + 
Sbjct: 683 -LSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKKVPLD 741

Query: 567 RASEDQNL 574
              E+QNL
Sbjct: 742 ELLEEQNL 749


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 180/360 (50%), Gaps = 1/360 (0%)

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           EF ++  +  G+ +           G   +     N +L  +  QN+   A   F    R
Sbjct: 241 EFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVR 300

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           +  +P+  TF+ LI    + G + KAF  F  M   G +PD++ Y+ LI GL +   +  
Sbjct: 301 IGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLED 360

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
           G  LL  V        DVV ++S +  Y K+G + +   IY  M + GI P+ V+ ++LI
Sbjct: 361 GQRLLL-VALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILI 419

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            GF + G ++ A  +  ++L  G+ P ++T+S+LI G+C++G L  G  L ++M  K   
Sbjct: 420 KGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCE 479

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+   +++LIN LCK+  + DA RF  Q     L P  F  N ++D FC+   +  A  +
Sbjct: 480 PDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKV 539

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              M     K D VT+TILI G    GR+ EA+ +F +ML+    PD IT  +LI  L K
Sbjct: 540 YYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCK 599



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 201/403 (49%), Gaps = 8/403 (1%)

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           M +  ++G    V  ++  M ++G  PN       +    + G+   A GL  Q      
Sbjct: 384 MDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGF 443

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
             S   Y++L+    K  N  +  Y++++  +   +PDT  +++LI GL + G V  A  
Sbjct: 444 EPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALR 503

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVA---RGHELLKEVKFKSEFSPDVVTYTSVI 339
           FF+   + G SP++ T NTL+   CR+  +    + + L+  +  K+    D VTYT +I
Sbjct: 504 FFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKA----DTVTYTILI 559

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G  + G++D+A  ++ +M     KP  +T+  LIDG  K+    +   + + M      
Sbjct: 560 KGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVA 619

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD+  ++ LI+ + R G L   L L   +  +   P+V+TF  +I   C   RL+DA + 
Sbjct: 620 PDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQL 679

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++    L P    +  +ID FC+ G +D+A ++ ++M E+  +P+ VT++ LI G+  
Sbjct: 680 FAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFK 739

Query: 520 KGRMVEA-ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              M+E+ + ++N+ML    AP+ ++ + LI  L K G+  EA
Sbjct: 740 SQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEA 782



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 200/414 (48%), Gaps = 1/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++ + C+ G  D   V+FD M  +G  P+  +    +    +AG+ +  + LL   
Sbjct: 309 TFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVA 368

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    ++S ++A VK  +    + ++K        P+  + +ILI+G  + G +
Sbjct: 369 LDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRI 428

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  +   G  P I+TY+ LI+G C+   +  G  L +++  K    PD + Y+ 
Sbjct: 429 LEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM-IKKRCEPDTIVYSV 487

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK G +  A   + +  + G+ P+  T N L+D F ++  +V A  +   M    
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D VT++ LI G  + G++++ L L  +M  K+  P+V T+  LI+ LCK  + +   
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGL 607

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  N + P   +YN +I+   + G+++ A  +   + E+  KPD  TF  +I  +
Sbjct: 608 CIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCY 667

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C   R+ +A+ +F KM      P+ IT   LI    + G  ++A  +  +  E+
Sbjct: 668 CNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 181/367 (49%), Gaps = 3/367 (0%)

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +S +  F + S  R G  D +  +        + +S  +   LL +L+  +  +  V  +
Sbjct: 166 HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKY 225

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            E      +     +  ++      GEV+    F   +   G   DI+T N ++ G+   
Sbjct: 226 GELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQ 285

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
           N++    +    V  +    P+VVT++++I  YCK G +DKA  +++ M   G+ P  + 
Sbjct: 286 NDIGVADDYFNMV-VRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIV 344

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +++LIDG  K G +   + +    L  G   DVV FSS +D Y + G L + +++   M 
Sbjct: 345 YSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRML 404

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            + +SPNV + +ILI   C+  R+ +A     Q+      P    Y+ +I GFCK+GN+ 
Sbjct: 405 NEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLR 464

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +   +  +M +KRC+PD + +++LI G C +G + +A+  F + +  G +P+  T+N+L+
Sbjct: 465 DGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLL 524

Query: 550 S--CLLK 554
              C LK
Sbjct: 525 DSFCRLK 531



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 187/396 (47%), Gaps = 37/396 (9%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           + L    S  TY+ ++   C+ G L D   +  D ++     P++ +    ++   + G 
Sbjct: 439 LKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCE-PDTIVYSVLINGLCKQGL 497

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A     Q     ++ + F  N+LL++  +      A+ ++     L  + DT T+ I
Sbjct: 498 VGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTI 557

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL------- 319
           LI+G ++ G V +A   F+ M      PD++TY TLI GLC++ + + G  +        
Sbjct: 558 LIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNA 617

Query: 320 ----------------KEVKFKSEFS-----------PDVVTYTSVISGYCKLGKMDKAT 352
                           +E   ++              PDV T+ ++I  YC   ++D A 
Sbjct: 618 VAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAV 677

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ +M S  ++P+A+TF +LID F + G M  A  M  +ML  G  P++VT+S LI GY
Sbjct: 678 QLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGY 737

Query: 413 CRN-GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            ++   +  GLKL +EM   N++PN+ +++ILI+ LCK   + +A    +      L+P 
Sbjct: 738 FKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPD 797

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
              Y  +I G+CK G + EA ++   M   R  PD+
Sbjct: 798 VIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDR 833



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 178/394 (45%), Gaps = 1/394 (0%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           F+ +   G  PN       + +  + G  D A  L        VT    +Y+ L++ L K
Sbjct: 295 FNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFK 354

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
               ++   +         + D   F+  +    +IG++ +  + +  M + G SP++V+
Sbjct: 355 AGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVS 414

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
            + LI G C+   +     L  ++  K  F P ++TY+++I+G+CK G +     +Y +M
Sbjct: 415 CSILIKGFCQNGRILEACGLFVQI-LKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                +P  + ++VLI+G  K G +  A     + ++ G  P+V T ++L+D +CR   +
Sbjct: 474 IKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCI 533

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
              +K+   M   N+  +  T+TILI    +  R+++A     Q+   D  P    Y  +
Sbjct: 534 VGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTL 593

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           IDG CK         I   M +    PD   + +LI  H  +G +  A+ +F  ++  G 
Sbjct: 594 IDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGP 653

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            PD  T N++I C       ++A ++  + + +Q
Sbjct: 654 KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ 687


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 205/440 (46%), Gaps = 36/440 (8%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           +++ R   +  + DS   VFDY R  G   +      F+ +  R+G  +     L Q   
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 181

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             + +    + ++++ L K+     A  +  E      +P   T+N L+ G   I +V  
Sbjct: 182 SGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGG 241

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
             E    M       ++ TY  LI    R +++    +L  E+  K    PDV  YTS+I
Sbjct: 242 VNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM-LKKGIEPDVYIYTSII 300

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +  CK G M +A  +++EM    + P+A T+  LI+G  K G M +AE M   M S G  
Sbjct: 301 NWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVD 360

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN--------------------------- 432
            + V F++L+DGYC+ G +++ L+L + M+ K                            
Sbjct: 361 VNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRL 420

Query: 433 --------LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
                   ++PNV +F+ILI+  CKE    +ARR  K ++     P    YN  I+ +CK
Sbjct: 421 LLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCK 480

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G ++EA  ++ EM+E+   PD  T+T LI G    G +  A+ +FN+M ++G   + +T
Sbjct: 481 KGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVT 540

Query: 545 VNSLISCLLKGGMPNEAFRI 564
              +IS L K G  +EAF++
Sbjct: 541 YTVIISGLSKDGRADEAFKL 560



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 205/430 (47%), Gaps = 2/430 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L  +KR  N +L ++FL    V+  +     ++  V+  LC+ G     + + D +   G
Sbjct: 160 LLALKRSGNMELCVEFLR-QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG 218

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
             P+       ++  I          +LS      V  +   Y  L+    + +  +EA 
Sbjct: 219 FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAE 278

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F E  +   +PD + +  +I    + G +K+AF  F +M      P+  TY  LI+G 
Sbjct: 279 KLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 338

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+  E+     ++ +++ K     + V + +++ GYCK G +D+A  + N M   G +  
Sbjct: 339 CKAGEMKAAEMMVNDMQSKG-VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 397

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           A T N++  GF +      A+ +   M   G  P+VV+FS LID YC+     +  +L  
Sbjct: 398 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 457

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M+ K  +P+V T+   I   CK+ ++ +A + + +++   L+P  + Y  +IDG   +G
Sbjct: 458 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 517

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           NVD A  +  EM +     + VT+T++I G    GR  EA  ++++M + G  PDD   +
Sbjct: 518 NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYS 577

Query: 547 SLISCLLKGG 556
           SLI+ L K G
Sbjct: 578 SLIASLHKVG 587



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 1/266 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G   + +++ + M+S G   N  +    +    + G  D A  L +  
Sbjct: 330 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 389

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +     +  F  N + +   + N  +EA  +          P+  +F+ILI    +    
Sbjct: 390 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 449

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G +P +VTYN  I   C+  ++   ++L+ E++ +    PD  TYTS
Sbjct: 450 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG-LMPDTYTYTS 508

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G    G +D+A  ++NEM   G+  + VT+ V+I G  K G    A  + + M   G
Sbjct: 509 LIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEG 568

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLK 423
            +PD   +SSLI    + G L  GL+
Sbjct: 569 IVPDDGIYSSLIASLHKVGPLVSGLE 594



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 77/157 (49%)

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           R+G +   ++   +M    +   V ++T +++ LCK+  +  A+  + +L      P   
Sbjct: 165 RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVI 224

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN +++G+ +  +V   N I++ ME+     +  T+T+LI  +    ++ EA  +F++M
Sbjct: 225 TYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM 284

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           L+ G  PD     S+I+   K G    AF +    +E
Sbjct: 285 LKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTE 321



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 55/132 (41%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN  +   C+ G  +    + + M+  G +P++      +     +G  D A  L 
Sbjct: 467 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELF 526

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++     +  +   Y  +++ L K   ADEA  ++ E  +    PD   ++ LI  L ++
Sbjct: 527 NEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 586

Query: 275 GEVKKAFEFFYD 286
           G +    E   D
Sbjct: 587 GPLVSGLENVVD 598


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 205/440 (46%), Gaps = 36/440 (8%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           +++ R   +  + DS   VFDY R  G   +      F+ +  R+G  +     L Q   
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 185

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             + +    + ++++ L K+     A  +  E      +P   T+N L+ G   I +V  
Sbjct: 186 SGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGG 245

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
             E    M       ++ TY  LI    R +++    +L  E+  K    PDV  YTS+I
Sbjct: 246 VNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM-LKKGIEPDVYIYTSII 304

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +  CK G M +A  +++EM    + P+A T+  LI+G  K G M +AE M   M S G  
Sbjct: 305 NWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVD 364

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN--------------------------- 432
            + V F++L+DGYC+ G +++ L+L + M+ K                            
Sbjct: 365 VNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRL 424

Query: 433 --------LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
                   ++PNV +F+ILI+  CKE    +ARR  K ++     P    YN  I+ +CK
Sbjct: 425 LLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCK 484

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G ++EA  ++ EM+E+   PD  T+T LI G    G +  A+ +FN+M ++G   + +T
Sbjct: 485 KGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVT 544

Query: 545 VNSLISCLLKGGMPNEAFRI 564
              +IS L K G  +EAF++
Sbjct: 545 YTVIISGLSKDGRADEAFKL 564



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 205/430 (47%), Gaps = 2/430 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L  +KR  N +L ++FL    V+  +     ++  V+  LC+ G     + + D +   G
Sbjct: 164 LLALKRSGNMELCVEFLR-QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG 222

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
             P+       ++  I          +LS      V  +   Y  L+    + +  +EA 
Sbjct: 223 FKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAE 282

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F E  +   +PD + +  +I    + G +K+AF  F +M      P+  TY  LI+G 
Sbjct: 283 KLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGA 342

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+  E+     ++ +++ K     + V + +++ GYCK G +D+A  + N M   G +  
Sbjct: 343 CKAGEMKAAEMMVNDMQSKG-VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 401

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
           A T N++  GF +      A+ +   M   G  P+VV+FS LID YC+     +  +L  
Sbjct: 402 AFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFK 461

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M+ K  +P+V T+   I   CK+ ++ +A + + +++   L+P  + Y  +IDG   +G
Sbjct: 462 VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASG 521

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           NVD A  +  EM +     + VT+T++I G    GR  EA  ++++M + G  PDD   +
Sbjct: 522 NVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYS 581

Query: 547 SLISCLLKGG 556
           SLI+ L K G
Sbjct: 582 SLIASLHKVG 591



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 1/266 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+ G   + +++ + M+S G   N  +    +    + G  D A  L +  
Sbjct: 334 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 393

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +     +  F  N + +   + N  +EA  +          P+  +F+ILI    +    
Sbjct: 394 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNF 453

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G +P +VTYN  I   C+  ++   ++L+ E++ +    PD  TYTS
Sbjct: 454 AEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG-LMPDTYTYTS 512

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G    G +D+A  ++NEM   G+  + VT+ V+I G  K G    A  + + M   G
Sbjct: 513 LIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEG 572

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLK 423
            +PD   +SSLI    + G L  GL+
Sbjct: 573 IVPDDGIYSSLIASLHKVGPLVSGLE 598



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 77/157 (49%)

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           R+G +   ++   +M    +   V ++T +++ LCK+  +  A+  + +L      P   
Sbjct: 169 RSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVI 228

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN +++G+ +  +V   N I++ ME+     +  T+T+LI  +    ++ EA  +F++M
Sbjct: 229 TYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM 288

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           L+ G  PD     S+I+   K G    AF +    +E
Sbjct: 289 LKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTE 325



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/132 (21%), Positives = 55/132 (41%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN  +   C+ G  +    + + M+  G +P++      +     +G  D A  L 
Sbjct: 471 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELF 530

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++     +  +   Y  +++ L K   ADEA  ++ E  +    PD   ++ LI  L ++
Sbjct: 531 NEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 590

Query: 275 GEVKKAFEFFYD 286
           G +    E   D
Sbjct: 591 GPLVSGLENVVD 602


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 204/436 (46%), Gaps = 29/436 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+NL++ +LCEMG  ++ + VFD M   G  PN   +   V    RAG       LL + 
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R      +   YN+++++L  +    EA  + ++   +   PD  TFN  I  L + G++
Sbjct: 215 RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQI 274

Query: 278 KKAFEFFYDMG---SFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            +A   F DM      G   P+ VTYN ++ G C          +   +K     S  + 
Sbjct: 275 LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLS--LR 332

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y   + G  + GK+ +A  I NEM    IKP+  ++N+L+ G  K G    A  +   M
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  PD VT+S+L+ GYCR G++ +   +  EM      PN+YT  IL+++L KE R 
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--------------- 498
           ++A   L+ +            N +I+G CKAGN+D+A  IV+ M               
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSF 512

Query: 499 --------EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
                     K+C PD +T+  +I G C  GR+ EA     +M+    +PD +  ++ I 
Sbjct: 513 IDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIY 572

Query: 551 CLLKGGMPNEAFRIMQ 566
              K G  + AFR+++
Sbjct: 573 NYCKQGKLSSAFRVLK 588



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 213/411 (51%), Gaps = 10/411 (2%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF---VSSCIRAGKCDAAKGLLSQFR 218
           ++R+L ++GL ++    F  +R D    + P I F+       ++  + D    L     
Sbjct: 87  LVRTLADLGLLENAISQFRSLR-DRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V   T+ +N L++AL +    + A  +F +      +P+ ++  IL++G  R G   
Sbjct: 146 VARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              +   +M S G  P+ V YNT+IS LC   +     +L+++++ +   SPD+VT+   
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMR-EVGLSPDIVTFNCR 264

Query: 339 ISGYCKLGKMDKATGIYNEMN---SCGI-KPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           I+  CK G++ +A+ I+ +M      G+ KP+ VT+N++++GF   G    A  + + M 
Sbjct: 265 IAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMK 324

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +   L  + +++  + G  R+G+L +   + +EM  KN+ PN+Y++ IL++ LCK    +
Sbjct: 325 NSETL-SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DAR  L  ++ + + P    Y+ ++ G+C+ G + EAN ++ EM +  C P+  T  IL+
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILL 443

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                +GR  EA  +   M   G   D++T N++I+ L K G  ++A  I+
Sbjct: 444 HSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIV 494



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 183/441 (41%), Gaps = 58/441 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++  LC+ G+    + +   MR  G  P++      +    R GK   A  +L + 
Sbjct: 368 SYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREM 427

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + +  N LL++L K+  A EA  + +         D  T N +I GL + G +
Sbjct: 428 IQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNL 487

Query: 278 KKAFEFFYDMGSFG-----------------------CSPDIVTYNTLISGLCRVNEVAR 314
            KA E    M + G                       C PD +TY T+I GLC+V  V  
Sbjct: 488 DKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDE 547

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             + L E+  K + SPD + + + I  YCK GK+  A  +  EM   G   S  T+N LI
Sbjct: 548 AKKKLLEMIGK-KLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G G    +     + + M   G  P+V T++++I      G+L     L DEM  K +S
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGIS 666

Query: 435 PNVYTFTILINALCKENRLNDARRF-------------LKQLKWNDLVP----------- 470
           PN+YTF ILI A  K      A+               L    +N+L+            
Sbjct: 667 PNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELF 726

Query: 471 ----------KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
                     K F+Y  +I+  CK G +D+A+ I+ +M +K+   D  +F  +I     +
Sbjct: 727 EAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKR 786

Query: 521 GRMVEAISIFNKMLRIGCAPD 541
           G    A     +M+ +    D
Sbjct: 787 GSKHAADEFAERMMEMASETD 807



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 191/440 (43%), Gaps = 23/440 (5%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S ++YN+ M  L   G      ++ + M      PN       V    + G    A+ +L
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              R   V   T  Y++LL+   ++    EA Y+ +E  ++   P+ +T NIL+  L + 
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS----- 329
           G   +A +    M   G   D VT NT+I+GLC+   + +  E++  +  +   S     
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLG 509

Query: 330 -----------------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                            PD +TY ++I G CK+G++D+A     EM    + P ++ F+ 
Sbjct: 510 NSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDT 569

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
            I  + K G + SA  + + M   G    + T++SLI G     Q+ +   L DEMK + 
Sbjct: 570 FIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERG 629

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           + PNVYT+  +I+ L +  +L DA   L ++    + P  + +  +I  F KA +   A 
Sbjct: 630 IFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQ 689

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  E+    C   +  ++ +       G  ++A  +F   L    A  +     LI  L
Sbjct: 690 ELF-EIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKL 748

Query: 553 LKGGMPNEAFRIMQRASEDQ 572
            K G  ++A  I+ +  + Q
Sbjct: 749 CKDGKLDDASFILHKMMDKQ 768



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 5/215 (2%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLI-DGYCRNGQLNQGL 422
           PS  +    +   G + N +S    +R+R   F + P  ++F +L+     +  +++  +
Sbjct: 82  PSGFSLVRTLADLGLLENAISQFRSLRDR---FPHDPPPISFYNLLFRCSLKESRVDCVI 138

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  +M    + P  YTF +LI+ALC+   L +AR    ++      P  F    ++ G+
Sbjct: 139 WLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGY 198

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+AG       ++ EM      P++V +  +I   C +G+ VEA  +  KM  +G +PD 
Sbjct: 199 CRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDI 258

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           +T N  I+ L K G   EA RI +    D+ + LP
Sbjct: 259 VTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLP 293


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 218/456 (47%), Gaps = 17/456 (3%)

Query: 138 LGLKFLEFSRVNLSLNHS-----FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           LG +  E  R+   + H+       T N+++  LC+    +    +F+     G  P+  
Sbjct: 266 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 325

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +    + G+ D A  L  +        +  +Y SL+         ++   +FKE 
Sbjct: 326 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKEL 385

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            R   +PD    N  +  + + GEV+K    F D+ S+G  PD+ +Y+ LI GL +  + 
Sbjct: 386 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 445

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                +   +K +  F+ D   Y +V+ G+CK GK+ KA  I  EM    ++P+  T+  
Sbjct: 446 RETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 504

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           ++DG  K+  +  A  + E   S G   +VV +SSLIDG+ + G++++   + +EM  K 
Sbjct: 505 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 564

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L+PNVYT+  L++AL K   +N+A    + +K     P  + Y+ +I+G C+    ++A 
Sbjct: 565 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 624

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           V   +M+++   P+ VT+T +I G    G + +A S+F +    G  PD  + N+LI   
Sbjct: 625 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE-- 682

Query: 553 LKGGMPNEAFRIMQRASEDQNLQLP----SWKKAVP 584
              GM N A R M+ A +    QL     SW   VP
Sbjct: 683 ---GMSN-ANRAME-AYQTTVYQLSSSSCSWNFLVP 713



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 200/429 (46%), Gaps = 3/429 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L   E  + +   N S  TYN+++  LC  G  +    + D M      PN   +   V
Sbjct: 239 ALSLFEVMKKDAEPNSS--TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 296

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               +A K + A  +               Y SL++ L K+   DEA  +F++       
Sbjct: 297 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 356

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            +   +  LI+     G  +   + F ++   GC PD+   NT +  + +  EV +G  +
Sbjct: 357 ANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 416

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            ++++    F PDV +Y+ +I G  K G+  + + I++ M   G    A  +N ++DGF 
Sbjct: 417 FEDIR-SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 475

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G +  A  + E M      P V T+ +++DG  +  +L++   L +E K K +  NV 
Sbjct: 476 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            ++ LI+   K  R+++A   L+++    L P  + +N ++D   KA  ++EA V    M
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 595

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           +E +C P+  T++ILI G C   +  +A   +  M + G  P+ +T  ++IS L K G  
Sbjct: 596 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 655

Query: 559 NEAFRIMQR 567
            +A+ + +R
Sbjct: 656 TDAYSLFER 664



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 205/447 (45%), Gaps = 35/447 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G     + +F  M ++  +P +      +     AG+ + A  LL + 
Sbjct: 152 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 211

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK--------------------------- 250
           R      S   +NS+L  L K+   DEA+ +F+                           
Sbjct: 212 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVE 271

Query: 251 EYFRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           E +R+  +       P+  T NI++  L +  ++++A++ F      GC+PD VTY +LI
Sbjct: 272 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLI 331

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GL +  +V   + L +++   +  + + V YTS+I  +   G+ +    ++ E+   G 
Sbjct: 332 DGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC 390

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP     N  +D   K G +     + E + S+G+LPDV ++S LI G  + GQ  +   
Sbjct: 391 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 450

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +   MK +  + +   +  +++  CK  +++ A   L+++K   + P    Y  ++DG  
Sbjct: 451 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 510

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K   +DEA ++  E + K  + + V ++ LI G    GR+ EA  I  +M++ G  P+  
Sbjct: 511 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 570

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASE 570
           T NSL+  L+K    NEA    Q   E
Sbjct: 571 TWNSLLDALVKAEEINEALVCFQSMKE 597



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 183/379 (48%), Gaps = 3/379 (0%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           LPN    +   ++ +RA + D A   ++  R  +   +   Y  L+ AL +    + A+ 
Sbjct: 8   LPNQACADL-AAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           + ++   +  +     F  L++ L+R G+V  A     ++      PDIV YN  I    
Sbjct: 67  LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFG 126

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +   V    +   E+K +    PD V+YTS+I   CK G++ +A  ++ +M +    P A
Sbjct: 127 KAGNVDMACKFFHELKAQG-LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCA 185

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             +N +I G+G  G    A  + ER+   G +P VV+F+S++    +  ++++ L L + 
Sbjct: 186 YAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV 245

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           MK K+  PN  T+ I+I+ LC   R+ +A R L +++   L P     N ++D  CKA  
Sbjct: 246 MK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 304

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           ++EA  I     ++ C PD VT+  LI G   KG++ EA  +F KML  G   + +   S
Sbjct: 305 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           LI      G   +  ++ +
Sbjct: 365 LIRNFFIHGRKEDGHKVFK 383



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 181/386 (46%), Gaps = 3/386 (0%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           L D+V  V   MR     P        + +   A + + A  LL Q +     +   ++ 
Sbjct: 26  LDDAVLAV-AVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 84

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           +L+ AL ++    +A+ +  E      +PD   +N+ I    + G V  A +FF+++ + 
Sbjct: 85  TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  PD V+Y ++I  LC+   +    EL  +++ +    P    Y ++I GY   G+ + 
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFED 203

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +   +   G  PS V+FN ++   GK   +  A  + E M      P+  T++ +ID
Sbjct: 204 AYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNIIID 262

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
             C  G++ +  ++ DEM+  +L PN+ T  I+++ LCK  +L +A +  +        P
Sbjct: 263 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 322

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  +IDG  K G VDEA  +  +M +     + V +T LI    + GR  +   +F
Sbjct: 323 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVF 382

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGG 556
            +++R GC PD   +N+ + C+ K G
Sbjct: 383 KELIRRGCKPDLTLLNTYMDCVFKAG 408



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 2/336 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           L  ALV+    D+AV       RL  +P    + +LI  L+     ++A E    M   G
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
               +  + TL+  L R  +VA    L+ EVK  S   PD+V Y   I  + K G +D A
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVK-GSCLEPDIVLYNVCIDCFGKAGNVDMA 134

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
              ++E+ + G+KP  V++  +I    K G +  AE +  +M +   +P    ++++I G
Sbjct: 135 CKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 194

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y   G+     KL + ++ +   P+V +F  ++  L K+ ++++A    + +K  D  P 
Sbjct: 195 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPN 253

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN +ID  C  G V+EA  I+ EME     P+ +T  I++   C   ++ EA  IF 
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              + GC PD +T  SLI  L K G  +EA+R+ ++
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK 349



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 191/419 (45%), Gaps = 9/419 (2%)

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           H F T   ++R+L   G       + D ++     P+  +    +    +AG  D A   
Sbjct: 81  HLFTT---LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKF 137

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             + +   +      Y S++  L K     EA  +F +     S P  + +N +I G   
Sbjct: 138 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 197

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G  + A++    +   GC P +V++N++++ L +  +V     L + +K  +E  P+  
Sbjct: 198 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE--PNSS 255

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY  +I   C  G++++A  I +EM    + P+ +T N+++D   K   +  A  + E  
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALCKEN 451
              G  PD VT+ SLIDG  + GQ+++  +L ++M   G N +P VY  T LI       
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY--TSLIRNFFIHG 373

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R  D  +  K+L      P   + N  +D   KAG V++  +I  ++      PD  +++
Sbjct: 374 RKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 433

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ILI G    G+  E  +IF+ M + G A D    N+++    K G  ++A+ I++   E
Sbjct: 434 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 492



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 8/270 (2%)

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           R+++      +++ +KF+  FS     YT +I    +  + ++A  +  +M   G +   
Sbjct: 25  RLDDAVLAVAVMRRLKFRPAFS----AYTVLIGALAEARRPERALELLRQMQEVGYEVGV 80

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             F  L+    + G +  A  + + +      PD+V ++  ID + + G ++   K   E
Sbjct: 81  HLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHE 140

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           +K + L P+  ++T +I  LCK  RL +A     Q++    VP  + YN +I G+  AG 
Sbjct: 141 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 200

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            ++A  ++  + E+ C P  V+F  ++     K ++ EA+S+F ++++    P+  T N 
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNI 259

Query: 548 LISCLLKGGMPNEAFRI---MQRASEDQNL 574
           +I  L  GG   EA+RI   M+ AS   NL
Sbjct: 260 IIDMLCLGGRVEEAYRILDEMEHASLFPNL 289


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 180/398 (45%), Gaps = 7/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+RSLC      S       M   G  P++      +    R  + D A+ L  + 
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y +L+    +    DEAV +F E      QPD   +  L++GL + G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRG 128

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++       M   G  P    Y  ++   C   +     E+L+E+ F+   +P VVT T+
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEM-FEKGLAPCVVTCTA 187

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+ YCK G+M  A  +   M   G KP+  T+N L+ GF   G +  A  +  +M   G
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT++ LI G C +G +    +L   M+G  L  + YT+  LINALCK+ R + A 
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L+   + P    +N +I+G CK+G VD A   + +M    C PD  T++  I   
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL 367

Query: 518 C-MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           C MKG   E +S   +ML+    P  +    +I  LLK
Sbjct: 368 CKMKGSQ-EGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 404



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 5/299 (1%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+N +I+ L R  ++  A  +   M   G  PD  T+N+LI G CR N+V    +L  ++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +  F+ DVV+Y ++I G+C+ G++D+A  ++ EM+    +P    +  L+ G  K G 
Sbjct: 73  PLRG-FAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGR 127

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
                 M  RM   G+ P    +++++D  C   +  +  ++  EM  K L+P V T T 
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +INA CKE R++DA R L+ +K     P  + YN ++ GFC  G V +A  ++ +M    
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             PD VT+ +LI G C+ G +  A  +   M   G   D  T N+LI+ L K G  ++A
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 306



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 188/396 (47%), Gaps = 1/396 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  +++ LC+ G  +   ++   M+  G  P++      V       K   A+ +L +  
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +        +++NA  K+    +A+ + +       +P+ WT+N L+QG    G+V 
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA      M   G +PD VTYN LI G C    +     LL+ ++     + D  TY ++
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA-DQYTYNAL 293

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+  CK G+ D+A  +++ + + GIKP+AVTFN LI+G  K G +  A    E+M+S G 
Sbjct: 294 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGC 353

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD  T+SS I+  C+     +GL    EM  K++ P+   +TI+I+ L KE       R
Sbjct: 354 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 413

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++  +   P    Y   +  +C  G ++EA  ++ EM +     D + +  L+ GH 
Sbjct: 414 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 473

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             G+   A+SI  +M  +   P+  T   L+  L++
Sbjct: 474 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR 509



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 187/414 (45%), Gaps = 9/414 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++   CE G  D    +F  M      P+  M    V    +AG+    +GLL   
Sbjct: 83  SYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGR--GEEGLLMLR 136

Query: 218 RPGEVTM--STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           R  E+    ST  Y ++++    +  A EA  M +E F     P   T   +I    + G
Sbjct: 137 RMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEG 196

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A      M   GC P++ TYN L+ G C   +V +   LL +++     +PD VTY
Sbjct: 197 RMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV-CGVNPDAVTY 255

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I G C  G ++ A  +   M   G+     T+N LI+   K G    A  + + + +
Sbjct: 256 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 315

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ VTF+SLI+G C++G+++   K  ++M     +P+ YT++  I  LCK     +
Sbjct: 316 RGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 375

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
              F+ ++   D+ P    Y  VI    K  N         EM    C PD VT+T  + 
Sbjct: 376 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 435

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            +C++GR+ EA ++  +M + G   D +  N+L+      G  + A  I+++ +
Sbjct: 436 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 489



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 192/441 (43%), Gaps = 19/441 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C  G       + + MR  G  P++      +      G  ++A  LL   
Sbjct: 219 TYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 278

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + YN+L+NAL K    D+A  +F        +P+  TFN LI GL + G+V
Sbjct: 279 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKV 338

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A++F   M S GC+PD  TY++ I  LC++     G   + E+  + +  P  V YT 
Sbjct: 339 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEM-LQKDVKPSTVNYTI 397

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI    K          + EM S G  P  VT+   +  +   G +  AE +   M   G
Sbjct: 398 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 457

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC--------- 448
              D + +++L+DG+   GQ +  + +  +M      PN +T+ IL+  L          
Sbjct: 458 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVL 517

Query: 449 --------KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
                   K   L D       +K N+ +P    Y+ +++GF + G  +EA  +V+ M+E
Sbjct: 518 PLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 577

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
                ++  +T L+   C   R ++A  +   M++ G  P  ++   L+S L+  G  ++
Sbjct: 578 DSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDK 637

Query: 561 AFRI-MQRASEDQNLQLPSWK 580
           A  I M    +D +     WK
Sbjct: 638 AKEIFMNSRWKDYSPDEIVWK 658



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 142/276 (51%), Gaps = 9/276 (3%)

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TYN +I  LCR  ++A     L  +  +S + PD  T+ S+I GYC+  ++D A  ++++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLS-LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDK 71

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL--PDVVTFSSLIDGYCRN 415
           M   G     V++  LI+GF + G +  A  +      FG +  PD+  +++L+ G C+ 
Sbjct: 72  MPLRGFAQDVVSYAALIEGFCETGRIDEAVEL------FGEMDQPDMHMYAALVKGLCKA 125

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G+  +GL +   MK     P+   +  +++  C E +  +A   L+++    L P     
Sbjct: 126 GRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTC 185

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
             VI+ +CK G + +A  ++  M+ + CKP+  T+  L+ G C +G++ +A+++ NKM  
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G  PD +T N LI      G    AFR+++    D
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 281



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/340 (21%), Positives = 140/340 (41%), Gaps = 23/340 (6%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           +E + ++   + GL F+    +   +  S   Y +V+  L +   +  V   +  M S G
Sbjct: 364 IEHLCKMKGSQEGLSFIG-EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 422

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
             P+       + +    G+ + A+ +L +     VT+ T  YN+L++        D AV
Sbjct: 423 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 482

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRI-----------GEVKKAFEFFYDMGSFGCS-- 293
            + K+   + S P+ +T+ IL++ L R+             V KA E     G F     
Sbjct: 483 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 542

Query: 294 ----PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               P+  TY++++ G            L+  +K  S  S +   YT++++ +CK  +  
Sbjct: 543 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDS-ISLNEDIYTALVTCFCKSKRYL 601

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE--YMRERMLSFGYLPDVVTFSS 407
            A  +   M   G  P  +++  L+ G    G    A+  +M  R     Y PD + +  
Sbjct: 602 DAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKD--YSPDEIVWKV 659

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
           +IDG  + G  +   ++   ++  N  P+  T+ +L   L
Sbjct: 660 IIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 699


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 213/449 (47%), Gaps = 36/449 (8%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K ++L+ R   +  +       F++M   G   +      ++ +  R G+ D+      +
Sbjct: 156 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 215

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               +V ++ +    +L+ L K+ + +    +  E      + +  T+N  I+G  +  +
Sbjct: 216 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +    E    M   G + ++VTY  LI G   + ++     L +E++ K     DV  YT
Sbjct: 276 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG-IEADVYVYT 334

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+IS  C+ G + +A  +++EM   G+ PSA T+  LI G  K G M +A+ +   M   
Sbjct: 335 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 394

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLK-----------------------LC-----DEM 428
           G   + V F++LIDGYC +G +++ L+                       LC     DE 
Sbjct: 395 GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 454

Query: 429 KG-------KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           KG       + +SPN  +FT LI+  CKE    +A+R  ++++    VP    YN +IDG
Sbjct: 455 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 514

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           + K GN+ EA+ +  E+E +   PD  T T LI G C+ G++  A+ +F++M + G  P+
Sbjct: 515 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 574

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +T  ++IS L K G   EAF++     E
Sbjct: 575 VVTYTAMISGLSKDGRSEEAFKLYDEMKE 603



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 166/343 (48%), Gaps = 7/343 (2%)

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
           V  +   M  +G   N       +      GK + A+ L  + R   +    ++Y S+++
Sbjct: 279 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 338

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
              +  N   A+ +F E       P   T+  LI G+ + G+++ A     +M   G   
Sbjct: 339 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 398

Query: 295 DIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           + V +NTLI G C    V+E  R    L+ V  K     DV  Y S+ SG CKL + D+A
Sbjct: 399 NPVIFNTLIDGYCESGMVDEALR----LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 454

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
            G+   M   G+ P+ ++F  LID + K GN V A+ +   M   G +P+++T++ LIDG
Sbjct: 455 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 514

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y + G + +  KL DE++ + L P+VYT T LI+  C + +++ A +   ++    LVP 
Sbjct: 515 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 574

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              Y  +I G  K G  +EA  +  EM+E    PD   ++ L+
Sbjct: 575 VVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 189/406 (46%), Gaps = 3/406 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VNL +  +  +  +V+  LC+ G  +  + + D + + G   N      F+    +    
Sbjct: 217 VNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDL 276

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
                +L+      V  +   Y  L++        +EA  +F+E      + D + +  +
Sbjct: 277 GGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 336

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS- 326
           I    R G VK+A   F +M   G  P   TY  LI G+C+  ++     L+ E++ K  
Sbjct: 337 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGI 396

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           + +P  V + ++I GYC+ G +D+A  +   M   G++     +N +  G  K+     A
Sbjct: 397 DLNP--VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 454

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + +   M+  G  P+ ++F++LID YC+ G   +  ++  EM+ K   PN+ T+ +LI+ 
Sbjct: 455 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 514

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
             K   + +A +   +L+   L+P  +    +I G C  G VD A  +  EM ++   P+
Sbjct: 515 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 574

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            VT+T +I G    GR  EA  ++++M   G  PDD   +SL+  L
Sbjct: 575 VVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 161/334 (48%), Gaps = 8/334 (2%)

Query: 248 MFKEYFRLYSQPDTWTFNI-------LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           MF E    +   +   F+I        +  L R G+V     FF  M +      + +  
Sbjct: 170 MFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLT 229

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            ++ GLC+  +V  G +L+ EV  K     +VVTY + I GY K   +     I   M  
Sbjct: 230 IVLDGLCKRGDVEMGRKLMDEVAAKG-VKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 288

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+  + VT+ +LI GF  +G +  A+ + E M   G   DV  ++S+I   CR+G + +
Sbjct: 289 EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 348

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L L DEM  K L P+ +T+  LI+ +CK  ++  A+  + +++   +   P ++N +ID
Sbjct: 349 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 408

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+C++G VDEA  +   ME+K  + D   +  +  G C   R  EA  +   M+  G +P
Sbjct: 409 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 468

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           + ++  +LI    K G   EA R+ +   E  N+
Sbjct: 469 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 502



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 150/388 (38%), Gaps = 70/388 (18%)

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           L S  ++ T ++++   + I   +   +FF+ +      PD+  Y TLI  L R  +  +
Sbjct: 48  LLSSLNSQTVHLILS--NHILTAESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDK 105

Query: 315 GHELLKEVKFKSEFS---------PDVVTYTSVISGYCKLGKMDKAT------------- 352
            H+  K  + +  F+           V    S++   C   K ++A              
Sbjct: 106 LHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVY 165

Query: 353 ----------GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
                       +  M   G      +  V +    + G + S      RM++      V
Sbjct: 166 ADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTV 225

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP--------------------------- 435
            + + ++DG C+ G +  G KL DE+  K +                             
Sbjct: 226 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL 285

Query: 436 --------NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
                   NV T+T+LI+      ++ +A+R  ++++   +    ++Y  +I   C++GN
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           V  A V+  EM +K   P   T+  LI G C  G+M  A  + N+M   G   + +  N+
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 405

Query: 548 LISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           LI    + GM +EA R +Q   E + L+
Sbjct: 406 LIDGYCESGMVDEALR-LQVVMEKKGLE 432



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 74/172 (43%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           N K   K L FS V   ++ +  ++  ++   C+ G     + VF  M   G++PN    
Sbjct: 449 NRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITY 508

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              +    + G    A  L  +     +    +   SL++        D A+ +F E  +
Sbjct: 509 NVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ 568

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
               P+  T+  +I GLS+ G  ++AF+ + +M   G +PD   Y++L+  L
Sbjct: 569 RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 208/431 (48%), Gaps = 6/431 (1%)

Query: 138 LGLKFLEFSRVNLSLNHS-----FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           LG +  E  R+   + H+       T N+++  LC+    +    +F+     G  P+  
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +    + G+ D A  L  +        +  +Y SL+         ++   +FKE 
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            R   +PD    N  +  + + GEV+K    F D+ S+G  PD+ +Y+ LI GL +  + 
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                +   +K +  F+ D   Y +V+ G+CK GK+ KA  I  EM    ++P+  T+  
Sbjct: 314 RETSNIFHAMK-QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 372

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           ++DG  K+  +  A  + E   S G   +VV +SSLIDG+ + G++++   + +EM  K 
Sbjct: 373 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 432

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L+PNVYT+  L++AL K   +N+A    + +K     P  + Y+ +I+G C+    ++A 
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 492

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           V   +M+++   P+ VT+T +I G    G + +A S+F +    G  PD  + N+LI  +
Sbjct: 493 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552

Query: 553 LKGGMPNEAFR 563
                  EA++
Sbjct: 553 SNANRAMEAYQ 563



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 194/410 (47%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC  G  +    + D M      PN   +   V    +A K + A  +    
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y SL++ L K+   DEA  +F++        +   +  LI+     G  
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   + F ++   GC PD+   NT +  + +  EV +G  + ++++    F PDV +Y+ 
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR-SYGFLPDVRSYSI 302

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K G+  + + I++ M   G    A  +N ++DGF K G +  A  + E M    
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 362

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V T+ +++DG  +  +L++   L +E K K +  NV  ++ LI+   K  R+++A 
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 422

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    L P  + +N ++D   KA  ++EA V    M+E +C P+  T++ILI G 
Sbjct: 423 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 482

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C   +  +A   +  M + G  P+ +T  ++IS L K G   +A+ + +R
Sbjct: 483 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 532



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 205/447 (45%), Gaps = 35/447 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G     + +F  M ++  +P +      +     AG+ + A  LL + 
Sbjct: 20  SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 79

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMF---------------------------K 250
           R      S   +NS+L  L K+   DEA+ +F                           +
Sbjct: 80  RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVE 139

Query: 251 EYFRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           E +R+  +       P+  T NI++  L +  ++++A++ F      GC+PD VTY +LI
Sbjct: 140 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLI 199

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GL +  +V   + L +++   +  + + V YTS+I  +   G+ +    I+ E+   G 
Sbjct: 200 DGLGKKGQVDEAYRLFEKM-LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 258

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           KP     N  +D   K G +     + E + S+G+LPDV ++S LI G  + GQ  +   
Sbjct: 259 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 318

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +   MK +  + +   +  +++  CK  +++ A   L+++K   + P    Y  ++DG  
Sbjct: 319 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 378

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K   +DEA ++  E + K  + + V ++ LI G    GR+ EA  I  +M++ G  P+  
Sbjct: 379 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 438

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASE 570
           T NSL+  L+K    NEA    Q   E
Sbjct: 439 TWNSLLDALVKAEEINEALVCFQSMKE 465



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 139/277 (50%), Gaps = 2/277 (0%)

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A++FF+++ + G  PD V+Y ++I  LC+   +    EL  +++ +    P    Y ++I
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMI 60

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            GY   G+ + A  +   +   G  PS V+FN ++   GK   +  A  + E M      
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE- 119

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+  T++ +ID  C  G++ +  ++ DEM+  +L PN+ T  I+++ LCK  +L +A + 
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            +        P    Y  +IDG  K G VDEA  +  +M +     + V +T LI    +
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            GR  +   IF +++R GC PD   +N+ + C+ K G
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 276



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 125/240 (52%), Gaps = 1/240 (0%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD V+YTS+I   CK G++ +A  ++ +M +    P A  +N +I G+G  G    A 
Sbjct: 14  LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 73

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + ER+   G +P VV+F+S++    +  ++++ L L + MK K+  PN  T+ I+I+ L
Sbjct: 74  KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDML 132

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C   R+ +A R L +++   L P     N ++D  CKA  ++EA  I     ++ C PD 
Sbjct: 133 CLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 192

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+  LI G   KG++ EA  +F KML  G   + +   SLI      G   +  +I + 
Sbjct: 193 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 252



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 152/348 (43%), Gaps = 37/348 (10%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PD  ++  +I  L + G + +A E F  M +    P    YNT+I G          ++
Sbjct: 15  KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYK 74

Query: 318 LLKEVK---------------------------------FKSEFSPDVVTYTSVISGYCK 344
           LL+ ++                                  K +  P+  TY  +I   C 
Sbjct: 75  LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCL 134

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++++A  I +EM    + P+ +T N+++D   K   +  A  + E     G  PD VT
Sbjct: 135 GGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVT 194

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           + SLIDG  + GQ+++  +L ++M   G N +P VY  T LI       R  D  +  K+
Sbjct: 195 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY--TSLIRNFFIHGRKEDGHKIFKE 252

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           L      P   + N  +D   KAG V++  +I  ++      PD  +++ILI G    G+
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             E  +IF+ M + G A D    N+++    K G  ++A+ I++   E
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 360



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 1/217 (0%)

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A   ++E+ + G+KP  V++  +I    K G +  AE +  +M +   +P    ++++I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           GY   G+     KL + ++ +   P+V +F  ++  L K+ ++++A    + +K  D  P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 120

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               YN +ID  C  G V+EA  I+ EME     P+ +T  I++   C   ++ EA  IF
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
               + GC PD +T  SLI  L K G  +EA+R+ ++
Sbjct: 181 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK 217



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 4/155 (2%)

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           K   E+K + L P+  ++T +I  LCK  RL +A     Q++    VP  + YN +I G+
Sbjct: 4   KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
             AG  ++A  ++  + E+ C P  V+F  ++     K ++ EA+S+F ++++    P+ 
Sbjct: 64  GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNS 122

Query: 543 ITVNSLISCLLKGGMPNEAFRI---MQRASEDQNL 574
            T N +I  L  GG   EA+RI   M+ AS   NL
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL 157



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 3/118 (2%)

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +F  +LK   L P    Y  +I   CKAG + EA  + A+ME +R  P    +  +I+
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASE 570
           G+   GR  +A  +  ++   GC P  ++ NS+++CL K    +EA   F +M++ +E
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE 119


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 202/418 (48%), Gaps = 4/418 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAG 205
           + L +  S  TYN ++ S  + G  D + ++   M + G   LPN       ++   R G
Sbjct: 223 LQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKG 282

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
             + A  L+ + R  +   S+F YN L+  L+ +    +   +  E       P   T+N
Sbjct: 283 YLEEAAELVEEMRLSK-KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYN 341

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            +I GL + G+++ A   F +M + G  PD++TYN+L++G C+         L  +++ +
Sbjct: 342 AMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLR-R 400

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           +  +P V+TY  +I GYC+LG +++A  +  EM   G  P   T+ +L+ G   V ++  
Sbjct: 401 AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAM 460

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
                + MLS G  PD   +++ I      G +++  +L + +  + +S +  T+ ILI+
Sbjct: 461 TREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILID 520

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
            LCK   L DA   + Q+  N L P    Y  +I   C+ G + EA     +M      P
Sbjct: 521 GLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPP 580

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             VT+T++I  +C +G +  A   F KML  G  P++IT N LI  L + G    A+R
Sbjct: 581 SAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYR 638



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 177/369 (47%), Gaps = 1/369 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + LS   S  TYN ++  L   G    V  +   M ++G +P        +   +++G+ 
Sbjct: 294 MRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQI 353

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +AA+    + R   +      YNSLLN   K  N  EA+ +F +  R    P   T+NIL
Sbjct: 354 EAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNIL 413

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  R+G++++A     +M   GC PD+ TY  L+ G   V  +A   E   E+  K  
Sbjct: 414 IDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKG- 472

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD   Y + I     LG + K+  +   +   GI    VT+N+LIDG  K GN+  AE
Sbjct: 473 LRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAE 532

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  +M+S G  PD +T++ LI  +C  G L +  K  ++M    L P+  T+T++I+A 
Sbjct: 533 ELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAY 592

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+   L  A  + +++    + P    YN +I   C+ G    A     EM E+   P+K
Sbjct: 593 CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNK 652

Query: 508 VTFTILIIG 516
            T+T+LI G
Sbjct: 653 YTYTLLIDG 661



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 164/352 (46%), Gaps = 8/352 (2%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           +K++D+       L+    N  +  +  TYN ++  L + G  ++ Q  F  MR+ G LP
Sbjct: 318 VKKVDD-------LQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLP 370

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +       ++   +AG    A  L    R   +  +   YN L++   +  + +EA  + 
Sbjct: 371 DVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLK 430

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           +E       PD +T+ IL++G   +  +    EFF +M S G  PD   YNT I     +
Sbjct: 431 EEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITL 490

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++++  + L+EV      S D VTY  +I G CK G +  A  +  +M S G++P  +T
Sbjct: 491 GDISKSFQ-LREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCIT 549

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +  LI    + G +  A      M+S G  P  VT++ +I  YCR G L        +M 
Sbjct: 550 YTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKML 609

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            + + PN  T+ +LI+ALC+  R   A R   ++    LVP  + Y  +IDG
Sbjct: 610 EEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 164/340 (48%), Gaps = 4/340 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +L  L      D+   +  E  +L  +P   T+N L+   S+ G   K      +M +
Sbjct: 200 NKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEA 259

Query: 290 FG--CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            G  C P+ VTYN +I+GL R   +    EL++E++   + S    TY  +I+G    G 
Sbjct: 260 RGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKAS--SFTYNPLITGLLARGF 317

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           + K   +  EM + GI P+ VT+N +I G  + G + +A+     M + G LPDV+T++S
Sbjct: 318 VKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNS 377

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L++GYC+ G   + L L  +++   L+P V T+ ILI+  C+   L +ARR  +++    
Sbjct: 378 LLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 437

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
            +P  + Y  ++ G     ++        EM  K  +PD   +   I      G + ++ 
Sbjct: 438 CLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSF 497

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +   ++  G + D +T N LI  L K G   +A  +M +
Sbjct: 498 QLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQ 537



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 36/257 (14%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +PDV     V+       + D  + ++ EM   GI+PS VT+N L+D F K G     + 
Sbjct: 193 APDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDM 252

Query: 389 MRERMLSFGY--LPDVVTFSSLIDGYCRNG------------------------QLNQGL 422
           + + M + G   LP+ VT++ +I G  R G                         L  GL
Sbjct: 253 LLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGL 312

Query: 423 -------KLCD---EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
                  K+ D   EM+ + + P V T+  +I+ L +  ++  A+    +++   L+P  
Sbjct: 313 LARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDV 372

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +++G+CKAGN  EA ++  ++      P  +T+ ILI G+C  G + EA  +  +
Sbjct: 373 ITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEE 432

Query: 533 MLRIGCAPDDITVNSLI 549
           M+  GC PD  T   L+
Sbjct: 433 MVEQGCLPDVYTYTILM 449



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 3/210 (1%)

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           + EM S G+ P     N ++              +   ML  G  P +VT+++L+D + +
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 415 NGQLNQGLKLCDEMKGKNLS--PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            G+ ++   L  EM+ +  S  PN  T+ ++I  L ++  L +A   +++++ +      
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKA-SS 302

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           F YNP+I G    G V + + +  EME +   P  VT+  +I G    G++  A + F +
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVE 362

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           M  +G  PD IT NSL++   K G   EA 
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEAL 392


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 177/346 (51%), Gaps = 4/346 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +  LLN + K    D  + + K    +    D +T N+L+    +  +   A  F   + 
Sbjct: 74  FTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLM 133

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PDI T+ +LI+G C  N +     ++ ++  +    PDVV YT++I   CK G +
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQM-VEMGIKPDVVIYTTIIDSLCKNGHV 192

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D A  ++N+M + GI+P  V +  L++G    G    A+ +   M+     PDV+TF++L
Sbjct: 193 DNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID + + G+L    +L +EM   +++PN++T+T LIN LC E RL++AR+    ++    
Sbjct: 253 IDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGC 312

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y  +I+GFCK   V++A  I  EM +K    + +T+T LI G  + G+   A  
Sbjct: 313 FPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQE 372

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI---MQRASED 571
           +F  M+  G  P+  T N L+ CL   G  N+A  I   MQ+   D
Sbjct: 373 VFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREID 418



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 190/379 (50%), Gaps = 4/379 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++   C     +    + + M   G  P+  +    + S  + G  D A  L +Q 
Sbjct: 143 TFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQM 202

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     MY SL+N L       +A  + +   +   +PD  TFN LI    + G++
Sbjct: 203 ENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKL 262

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E + +M     +P+I TY +LI+GLC    +    ++   ++ K  F PDVV YTS
Sbjct: 263 LDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCF-PDVVAYTS 321

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+CK  K++ A  I+ EM+  G+  + +T+  LI GFG VG    A+ +   M+S G
Sbjct: 322 LINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRG 381

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS---PNVYTFTILINALCKENRLN 454
             P++ T++ L+   C NG++N+ L + ++M+ + +    PN+ T+ +L++ LC   +L 
Sbjct: 382 VPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLE 441

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A      ++  D+      Y  +I G CKAG V +A  +   +  K  KP+ VT+T +I
Sbjct: 442 KALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMI 501

Query: 515 IGHCMKGRMVEAISIFNKM 533
            G   +G M+EA  +F KM
Sbjct: 502 SGLFREGLMLEAHVLFRKM 520



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 202/445 (45%), Gaps = 21/445 (4%)

Query: 141 KFLEFSRVNLSLN---HSFKTYNLVMRSLCEMGLHDSVQV-----VFDYMRSDGHLPNSP 192
           K L FSR+ L L+    +F  Y  ++R+    GLH S+Q      +F +M     LP+  
Sbjct: 19  KALSFSRL-LGLSFWVRAFCNYREILRN----GLH-SLQFNEALDLFSHMVESRPLPSII 72

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                ++   +  K D    L    +   V+   +  N L+N   + +    A     + 
Sbjct: 73  DFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL 132

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
            +L  +PD +TF  LI G      +++A      M   G  PD+V Y T+I  LC+   V
Sbjct: 133 MKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHV 192

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                L  +++      PDVV YTS+++G C  G+   A  +   M    IKP  +TFN 
Sbjct: 193 DNALSLFNQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNA 251

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LID F K G ++ A+ +   M+     P++ T++SLI+G C  G+L++  ++   M+ K 
Sbjct: 252 LIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKG 311

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             P+V  +T LIN  CK  ++ DA +   ++    L      Y  +I GF   G  + A 
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ 371

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI---GCAPDDITVNSLI 549
            +   M  +   P+  T+ +L+   C  G++ +A+ IF  M +    G  P+  T N L+
Sbjct: 372 EVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLL 431

Query: 550 SCLLKGGMPNEAFRI---MQRASED 571
             L   G   +A  +   MQ+   D
Sbjct: 432 HGLCYNGKLEKALMVFGDMQKRDMD 456



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 186/383 (48%), Gaps = 39/383 (10%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F + SL+N     N  +EA+ M  +   +  +PD   +  +I  L + G V  A   F  
Sbjct: 142 FTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQ 201

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M ++G  PD+V Y +L++GLC      R  +LL     K +  PDV+T+ ++I  + K G
Sbjct: 202 MENYGIRPDVVMYTSLVNGLCNSGR-WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEG 260

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           K+  A  +YNEM    I P+  T+  LI+G    G +  A  M   M + G  PDVV ++
Sbjct: 261 KLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYT 320

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLS-------------------------------- 434
           SLI+G+C+  ++   +K+  EM  K L+                                
Sbjct: 321 SLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSR 380

Query: 435 ---PNVYTFTILINALCKENRLNDARRFLKQLKWNDL---VPKPFMYNPVIDGFCKAGNV 488
              PN+ T+ +L++ LC   ++N A    + ++  ++    P    YN ++ G C  G +
Sbjct: 381 GVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKL 440

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           ++A ++  +M+++      +T+TI+I G C  G++ +A+++F  +   G  P+ +T  ++
Sbjct: 441 EKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTM 500

Query: 549 ISCLLKGGMPNEAFRIMQRASED 571
           IS L + G+  EA  + ++  ED
Sbjct: 501 ISGLFREGLMLEAHVLFRKMKED 523



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 4/280 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++ +  + G     + +++ M      PN       ++     G+ D A+ +    
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y SL+N   K    ++A+ +F E  +     +T T+  LIQG   +G+ 
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKP 367

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS---PDVVT 334
             A E F  M S G  P+I TYN L+  LC   +V +   + ++++ K E     P++ T
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ-KREIDGVPPNIRT 426

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  ++ G C  GK++KA  ++ +M    +    +T+ ++I G  K G +  A  +   + 
Sbjct: 427 YNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLP 486

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           S G  P+VVT++++I G  R G + +   L  +MK   +S
Sbjct: 487 SKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 4/249 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + +S+  +  TY  ++  LC  G  D  + +F  M + G  P+       ++   +  K 
Sbjct: 273 IQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 332

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  +  +     +T +T  Y +L+         + A  +F         P+  T+N+L
Sbjct: 333 EDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVL 392

Query: 268 IQGLSRIGEVKKAFEFFYDMGSF---GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           +  L   G+V KA   F DM      G  P+I TYN L+ GLC   ++ +   +  +++ 
Sbjct: 393 LHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQ- 451

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K +    ++TYT +I G CK GK+  A  ++  + S G+KP+ VT+  +I G  + G M+
Sbjct: 452 KRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLML 511

Query: 385 SAEYMRERM 393
            A  +  +M
Sbjct: 512 EAHVLFRKM 520


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 201/462 (43%), Gaps = 10/462 (2%)

Query: 95  FVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEV-IKRLDNPKLGLKFLEFSRVNLSLN 153
            + V   ++LR   LS    R L ++  P  SL   + R     L L+       +    
Sbjct: 93  LLAVALPVVLRLHSLSPPPLRPLFDR--PFASLLAHLSRFALAPLALRLFAHMHRHAPPA 150

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
            +  TYN V+RSLC              M   G  P++      +    R  + D A+ L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +            Y +L+  L +    DEAV +F E      QPD   +  L++GL  
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCN 266

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
               ++       M   G  P    Y  ++   CR  +     E+L+E+ F+   +P VV
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM-FEKGLAPCVV 325

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T T+VI+ YCK G+M  A  +   M   G KP+  T+N L+ GF   G +  A  +  +M
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + G  PD VT++ LI G C +G +    +L   M+G  L  + YT+  LINALCK+ R 
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 445

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A      L+   + P    +N +I+G CK+G  D A   + +M    C PD  T++  
Sbjct: 446 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 505

Query: 514 IIGHC-MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           I   C MKG   E +S   +ML+    P  +    +I  LLK
Sbjct: 506 IEHLCKMKGSQ-EGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 546



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 168/334 (50%), Gaps = 6/334 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           + SLL  L +   A  A+ +F    R     P   T+N +I+ L R  ++ +A  +   M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  PD  T+N+LI G CR N+V    +L  ++  +  F+ DVV+Y ++I G C+ G+
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG-FAQDVVSYATLIEGLCEAGR 238

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D+A  ++ EM+    +P    +  L+ G            M  RM   G+ P    +++
Sbjct: 239 IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 294

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           ++D  CR  +  +  ++  EM  K L+P V T T +INA CKE R++DA R L+ +K   
Sbjct: 295 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 354

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P  + YN ++ GFC  G V +A  ++ +M      PD VT+ +LI G C+ G +  A 
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +   M   G   D  T N+LI+ L K G  ++A
Sbjct: 415 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 448



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 221/505 (43%), Gaps = 28/505 (5%)

Query: 59  RASTIAAIAHFHGLANGGSRP----FDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSD--- 111
           RA    A+ +   +   G RP    F+   V Y  +N+    + +   +    +  D   
Sbjct: 166 RADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVS 225

Query: 112 --TCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEM 169
             T    LCE      ++E+   +D P + +                  Y  +++ LC  
Sbjct: 226 YATLIEGLCEAGRIDEAVELFGEMDQPDMHM------------------YAALVKGLCNA 267

Query: 170 GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMY 229
              +   ++   M+  G  P++      V    R  K   A+ +L +     +       
Sbjct: 268 ERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTC 327

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
            +++NA  K+    +A+ + +       +P+ WT+N L+QG    G+V KA      M +
Sbjct: 328 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 387

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G +PD VTYN LI G C    +     LL+ ++     + D  TY ++I+  CK G+ D
Sbjct: 388 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA-DQYTYNALINALCKDGRTD 446

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  +++ + + GIKP+AVTFN LI+G  K G    A    E+M+S G  PD  T+SS I
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +  C+     +GL    EM  K++ P+   +TI+I+ L KE       R   ++  +   
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y   +  +C  G ++EA  ++ EM +     D + +  L+ GH   G+   A+SI
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 626

Query: 530 FNKMLRIGCAPDDITVNSLISCLLK 554
             +M  +   P+  T   L+  L++
Sbjct: 627 LKQMTSVASVPNQFTYFILLRHLVR 651



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 171/339 (50%), Gaps = 5/339 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN+++ +L ++ +   A+       R   +PD +TFN LI G  R  +V  A + F  M 
Sbjct: 156 YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 215

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G + D+V+Y TLI GLC    +    EL  E+       PD+  Y +++ G C   + 
Sbjct: 216 LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD-----QPDMHMYAALVKGLCNAERG 270

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           ++   +   M   G +PS   +  ++D   +      AE M + M   G  P VVT +++
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAV 330

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+ YC+ G+++  L++ + MK +   PNV+T+  L+   C E +++ A   L +++   +
Sbjct: 331 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGV 390

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I G C  G+++ A  ++  ME      D+ T+  LI   C  GR  +A S
Sbjct: 391 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 450

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +F+ +   G  P+ +T NSLI+ L K G  + A++ +++
Sbjct: 451 LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 489



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 190/417 (45%), Gaps = 15/417 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG---LL 214
           +Y  ++  LCE G  D    +F  M       + P +  + +  +  G C+A +G   LL
Sbjct: 225 SYATLIEGLCEAGRIDEAVELFGEM-------DQPDMHMYAA--LVKGLCNAERGEEGLL 275

Query: 215 SQFRPGEVTM--STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              R  E+    ST  Y ++++   ++  A EA  M +E F     P   T   +I    
Sbjct: 276 MLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYC 335

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G +  A      M   GC P++ TYN L+ G C   +V +   LL +++     +PD 
Sbjct: 336 KEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR-ACGVNPDA 394

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTY  +I G C  G ++ A  +   M   G+     T+N LI+   K G    A  + + 
Sbjct: 395 VTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS 454

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           + + G  P+ VTF+SLI+G C++G+ +   K  ++M     +P+ YT++  I  LCK   
Sbjct: 455 LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 514

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
             +   F+ ++   D+ P    Y  VI    K  N         EM    C PD VT+T 
Sbjct: 515 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTT 574

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            +  +C++GR+ EA ++  +M + G   D +  N+L+      G  + A  I+++ +
Sbjct: 575 SMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 631



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 186/424 (43%), Gaps = 18/424 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C  G       + + MR+ G  P++      +      G  ++A  LL   
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 420

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + YN+L+NAL K    D+A  +F        +P+  TFN LI GL + G+ 
Sbjct: 421 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A++F   M S GC+PD  TY++ I  LC++     G   + E+  + +  P  V YT 
Sbjct: 481 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEM-LQKDVKPSTVNYTI 539

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI    K          + EM S G  P  VT+   +  +   G +  AE +   M   G
Sbjct: 540 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 599

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC--------- 448
              D + +++L+DG+   GQ +  + +  +M      PN +T+ IL+  L          
Sbjct: 600 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVL 659

Query: 449 --------KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
                   K   L D       +K N+ +P    Y+ +++GF + G  +EA  +V+ M+E
Sbjct: 660 PLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 719

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
                ++  +T L+   C   R ++A  +   M++ G  P  ++   L+S L+  G  ++
Sbjct: 720 DSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDK 779

Query: 561 AFRI 564
           A  I
Sbjct: 780 AKEI 783



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 14/320 (4%)

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC-SPDIVTYNTLISGLCRVNEVA 313
           L+ +P    F  L+  LSR      A   F  M      +P   TYN +I  LCR  ++A
Sbjct: 115 LFDRP----FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLA 170

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
           R    L  +  +S + PD  T+ S+I GYC+  ++D A  ++++M   G     V++  L
Sbjct: 171 RALRYLS-LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATL 229

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYL--PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           I+G  + G +  A  +      FG +  PD+  +++L+ G C   +  +GL +   MK  
Sbjct: 230 IEGLCEAGRIDEAVEL------FGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKEL 283

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              P+   +  +++  C+E +  +A   L+++    L P       VI+ +CK G + +A
Sbjct: 284 GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 343

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++  M+ + CKP+  T+  L+ G C +G++ +A+++ NKM   G  PD +T N LI  
Sbjct: 344 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 403

Query: 552 LLKGGMPNEAFRIMQRASED 571
               G    AFR+++    D
Sbjct: 404 QCIDGHIESAFRLLRLMEGD 423



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 133/312 (42%), Gaps = 54/312 (17%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N    TY   MR+ C                          IE         G+ + A+ 
Sbjct: 566 NPDVVTYTTSMRAYC--------------------------IE---------GRLNEAEN 590

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           +L +     VT+ T  YN+L++        D AV + K+   + S P+ +T+ IL++ L 
Sbjct: 591 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 650

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           R+  V+              +P         +G+ +  E+     L   +K K+EF P+ 
Sbjct: 651 RMRLVEDVLPL---------TP---------AGVWKAIELTDVFGLFDVMK-KNEFLPNS 691

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY+S++ G+ + G+ ++AT + + M    I  +   +  L+  F K    + A  +   
Sbjct: 692 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 751

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G++P ++++  L+ G    GQ ++  ++    + K+ SP+   + ++I+ L K+  
Sbjct: 752 MIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGH 811

Query: 453 LNDARRFLKQLK 464
            + +R  +  L+
Sbjct: 812 SDISREMIIMLE 823



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/340 (21%), Positives = 140/340 (41%), Gaps = 23/340 (6%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           +E + ++   + GL F+    +   +  S   Y +V+  L +   +  V   +  M S G
Sbjct: 506 IEHLCKMKGSQEGLSFIG-EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 564

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
             P+       + +    G+ + A+ +L +     VT+ T  YN+L++        D AV
Sbjct: 565 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 624

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRI-----------GEVKKAFEFFYDMGSFGCS-- 293
            + K+   + S P+ +T+ IL++ L R+             V KA E     G F     
Sbjct: 625 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 684

Query: 294 ----PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               P+  TY++++ G            L+  +K  S  S +   YT++++ +CK  +  
Sbjct: 685 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDS-ISLNEDIYTALVTCFCKSKRYL 743

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE--YMRERMLSFGYLPDVVTFSS 407
            A  +   M   G  P  +++  L+ G    G    A+  +M  R     Y PD + +  
Sbjct: 744 DAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKD--YSPDEIVWKV 801

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
           +IDG  + G  +   ++   ++  N  P+  T+ +L   L
Sbjct: 802 IIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 1/406 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C +   ++   + D M   G  P    +   V    + GK D A  L+ + 
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKV 356

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + F+YN+L+N+L K  + D+A  ++     +  +P+  T++ILI    R G +
Sbjct: 357 GRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRL 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  +F  M   G    +  YN+LI+G C+  +++    L  E+  K    P   T+TS
Sbjct: 417 DVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG-VEPTATTFTS 475

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGYCK  ++ KA  +YN+M   GI P+  TF  LI G      M  A  + + ++   
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT++ LI+GYCR+G++++  +L ++M  K L P+ YT+  LI+ LC   R++ A+
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK 595

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F+  L   ++      Y+ ++ G+C+ G + EA     EM ++    D V   +LI G 
Sbjct: 596 DFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             +        +   M   G  PD++   S+I    K G   +AF 
Sbjct: 656 LKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 200/441 (45%), Gaps = 35/441 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++   C+ G   + + +F  M + G  P +      +S   +  +   A  L ++ 
Sbjct: 437 AYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKM 496

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +T + + + +L++ L   N   EA  +F E      +P   T+N+LI+G  R G++
Sbjct: 497 IDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKI 556

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAFE   DM   G  PD  TY  LISGLC    V++  + + ++  K     + + Y++
Sbjct: 557 DKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLH-KQNVKLNEMCYSA 615

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC+ G++ +A     EM   GI    V   VLIDG  K  +  +   + + M   G
Sbjct: 616 LLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQG 675

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD V ++S+ID Y + G   +  +  D M  +   PNV T+T L+N LCK   ++ A 
Sbjct: 676 LRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAG 735

Query: 458 RFLKQLKWNDLVPKPFMY----------------------------------NPVIDGFC 483
              K+++  ++ P    Y                                  N +I GFC
Sbjct: 736 LLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFC 795

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G   EA  +++EM E    PD VT++ LI  +C  G +  ++ +++ ML  G  PD +
Sbjct: 796 KLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLV 855

Query: 544 TVNSLISCLLKGGMPNEAFRI 564
             N LI      G  ++AF +
Sbjct: 856 AYNLLIYGCCVNGELDKAFEL 876



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 196/405 (48%), Gaps = 1/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + V+RS+CE+      +    +M ++G   +       +    +  +   A  +    
Sbjct: 227 TCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSL 286

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +L+    +    +  + +  E   L   P     + L+ GL + G++
Sbjct: 287 GGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKI 346

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+E    +G FG  P++  YN LI+ LC+  ++ +  ELL          P+ +TY+ 
Sbjct: 347 DDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKA-ELLYSNMSLMNLRPNGITYSI 405

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +C+ G++D A   ++ M   GI  +   +N LI+G  K G++ +AE +   M + G
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P   TF+SLI GYC++ Q+ +  KL ++M    ++PNVYTFT LI+ LC  N++ +A 
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +L    + P    YN +I+G+C+ G +D+A  ++ +M +K   PD  T+  LI G 
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C  GR+ +A    + + +     +++  ++L+    + G   EA 
Sbjct: 586 CSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEAL 630



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 219/461 (47%), Gaps = 22/461 (4%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
           ++  LD+ KL L+F  F  ++ ++NHS  +Y +++ +L    L      +   +      
Sbjct: 76  LMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESH 135

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKG--------LLSQFRPGEVTMSTFMY----------- 229
           P      F  S   +  K  +  G        +LS      V +   M+           
Sbjct: 136 PKCVFSHFLDS--YKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTL 193

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           ++LLN L+K         +F E      +PD +T + +++ +  + +  +A E    M +
Sbjct: 194 SALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEA 253

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G    IVTYN LI GLC+ + V+   E+ + +  K   + DVVTY +++ G+C+L + +
Sbjct: 254 NGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKG-LAADVVTYCTLVLGFCRLQQFE 312

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
               + +EM   G  P+    + L+DG  K G +  A  +  ++  FG++P++  +++LI
Sbjct: 313 AGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALI 372

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +  C+ G L++   L   M   NL PN  T++ILI++ C+  RL+ A  +  ++  + + 
Sbjct: 373 NSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIG 432

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
              + YN +I+G CK G++  A  +  EM  K  +P   TFT LI G+C   ++ +A  +
Sbjct: 433 ETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKL 492

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +NKM+  G  P+  T  +LIS L       EA  +     E
Sbjct: 493 YNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVE 533



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 200/449 (44%), Gaps = 37/449 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++ SLC+ G  D  ++++  M      PN       + S  R+G+ D A     + 
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + + YNSL+N   K  +   A  +F E      +P   TF  LI G  +  +V
Sbjct: 427 IQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQV 486

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +KAF+ +  M   G +P++ T+  LISGLC  N++A   EL  E+  + +  P  VTY  
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDEL-VERKIKPTEVTYNV 545

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC+ GK+DKA  +  +M+  G+ P   T+  LI G    G +  A+   + +    
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLK---------------------------------- 423
              + + +S+L+ GYC+ G+L + L                                   
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFF 665

Query: 424 -LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  +M  + L P+   +T +I+   KE     A      +   +  P    Y  +++G 
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGL 725

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CKAG +D A ++   M+     P+ +T+   +     +G M EAI + + ML+ G   + 
Sbjct: 726 CKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANT 784

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
           +T N +I    K G  +EA +++   +E+
Sbjct: 785 VTHNIIIRGFCKLGRFHEATKVLSEMTEN 813



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 1/304 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+N+LI GL +   V +A E    +G  G + D+VTY TL+ G CR+ +   G +L+ E+
Sbjct: 262 TYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEM 321

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +  FSP     + ++ G  K GK+D A  +  ++   G  P+   +N LI+   K G+
Sbjct: 322 -VELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGD 380

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  AE +   M      P+ +T+S LID +CR+G+L+  +   D M    +   VY +  
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNS 440

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LIN  CK   L+ A     ++    + P    +  +I G+CK   V +A  +  +M +  
Sbjct: 441 LINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNG 500

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             P+  TFT LI G C   +M EA  +F++++     P ++T N LI    + G  ++AF
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAF 560

Query: 563 RIMQ 566
            +++
Sbjct: 561 ELLE 564



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 154/348 (44%), Gaps = 37/348 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C  G  D    + + M   G +P++      +S     G+   AK  +   
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR----------------LYSQPDT 261
               V ++   Y++LL+   ++    EA+    E  +                   QPD 
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR 661

Query: 262 WTFNILI-----QGL--------------SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            TF  L+     QGL              S+ G  KKAFE +  M +  C P++VTY  L
Sbjct: 662 KTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTAL 721

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ++GLC+  E+ R   L K ++  +   P+ +TY   +    K G M +A G+++ M   G
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQ-AANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-G 779

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  + VT N++I GF K+G    A  +   M   G  PD VT+S+LI  YCR+G +   +
Sbjct: 780 LLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV 839

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           KL D M  + L P++  + +LI   C    L+ A      +    ++P
Sbjct: 840 KLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 213/449 (47%), Gaps = 36/449 (8%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           K ++L+ R   +  +       F++M   G   +      ++ +  R G+ D+      +
Sbjct: 160 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 219

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               +V ++ +    +L+ L K+ + +    +  E      + +  T+N  I+G  +  +
Sbjct: 220 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 279

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +    E    M   G + ++VTY  LI G   + ++     L +E++ K     DV  YT
Sbjct: 280 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG-IEADVYVYT 338

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+IS  C+ G + +A  +++EM   G+ PSA T+  LI G  K G M +A+ +   M   
Sbjct: 339 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 398

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLK-----------------------LC-----DEM 428
           G   + V F++LIDGYC +G +++ L+                       LC     DE 
Sbjct: 399 GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 458

Query: 429 KG-------KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           KG       + +SPN  +FT LI+  CKE    +A+R  ++++    VP    YN +IDG
Sbjct: 459 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 518

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           + K GN+ EA+ +  E+E +   PD  T T LI G C+ G++  A+ +F++M + G  P+
Sbjct: 519 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 578

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +T  ++IS L K G   EAF++     E
Sbjct: 579 VVTYTAMISGLSKDGRSEEAFKLYDEMKE 607



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 166/343 (48%), Gaps = 7/343 (2%)

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
           V  +   M  +G   N       +      GK + A+ L  + R   +    ++Y S+++
Sbjct: 283 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 342

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
              +  N   A+ +F E       P   T+  LI G+ + G+++ A     +M   G   
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 402

Query: 295 DIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           + V +NTLI G C    V+E  R    L+ V  K     DV  Y S+ SG CKL + D+A
Sbjct: 403 NPVIFNTLIDGYCESGMVDEALR----LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 458

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
            G+   M   G+ P+ ++F  LID + K GN V A+ +   M   G +P+++T++ LIDG
Sbjct: 459 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 518

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y + G + +  KL DE++ + L P+VYT T LI+  C + +++ A +   ++    LVP 
Sbjct: 519 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 578

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              Y  +I G  K G  +EA  +  EM+E    PD   ++ L+
Sbjct: 579 VVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 189/406 (46%), Gaps = 3/406 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VNL +  +  +  +V+  LC+ G  +  + + D + + G   N      F+    +    
Sbjct: 221 VNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDL 280

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
                +L+      V  +   Y  L++        +EA  +F+E      + D + +  +
Sbjct: 281 GGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 340

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS- 326
           I    R G VK+A   F +M   G  P   TY  LI G+C+  ++     L+ E++ K  
Sbjct: 341 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGI 400

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           + +P  V + ++I GYC+ G +D+A  +   M   G++     +N +  G  K+     A
Sbjct: 401 DLNP--VIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 458

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + +   M+  G  P+ ++F++LID YC+ G   +  ++  EM+ K   PN+ T+ +LI+ 
Sbjct: 459 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 518

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
             K   + +A +   +L+   L+P  +    +I G C  G VD A  +  EM ++   P+
Sbjct: 519 YSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPN 578

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            VT+T +I G    GR  EA  ++++M   G  PDD   +SL+  L
Sbjct: 579 VVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 161/334 (48%), Gaps = 8/334 (2%)

Query: 248 MFKEYFRLYSQPDTWTFNI-------LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           MF E    +   +   F+I        +  L R G+V     FF  M +      + +  
Sbjct: 174 MFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLT 233

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            ++ GLC+  +V  G +L+ EV  K     +VVTY + I GY K   +     I   M  
Sbjct: 234 IVLDGLCKRGDVEMGRKLMDEVAAKG-VKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 292

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+  + VT+ +LI GF  +G +  A+ + E M   G   DV  ++S+I   CR+G + +
Sbjct: 293 EGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 352

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L L DEM  K L P+ +T+  LI+ +CK  ++  A+  + +++   +   P ++N +ID
Sbjct: 353 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 412

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+C++G VDEA  +   ME+K  + D   +  +  G C   R  EA  +   M+  G +P
Sbjct: 413 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 472

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           + ++  +LI    K G   EA R+ +   E  N+
Sbjct: 473 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNV 506



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 11/234 (4%)

Query: 159 YNLVMRSLCEMGLHDS---VQVVFDY--MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           +N ++   CE G+ D    +QVV +   + SD    NS       S   +  + D AKGL
Sbjct: 407 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS-----IASGLCKLNRKDEAKGL 461

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L       V+ +T  + +L++   K+ N  EA  +F+E     + P+  T+N+LI G S+
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 521

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G +K+A +   ++ + G  PD+ T  +LI G C   +V    +L  E+  +    P+VV
Sbjct: 522 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG-LVPNVV 580

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           TYT++ISG  K G+ ++A  +Y+EM   G+ P    ++ L+         +S +
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQ 634



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 150/388 (38%), Gaps = 70/388 (18%)

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           L S  ++ T ++++   + I   +   +FF+ +      PD+  Y TLI  L R  +  +
Sbjct: 52  LLSSLNSQTVHLILS--NHILTAESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDK 109

Query: 315 GHELLKEVKFKSEFS---------PDVVTYTSVISGYCKLGKMDKAT------------- 352
            H+  K  + +  F+           V    S++   C   K ++A              
Sbjct: 110 LHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVY 169

Query: 353 ----------GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
                       +  M   G      +  V +    + G + S      RM++      V
Sbjct: 170 ADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTV 229

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP--------------------------- 435
            + + ++DG C+ G +  G KL DE+  K +                             
Sbjct: 230 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL 289

Query: 436 --------NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
                   NV T+T+LI+      ++ +A+R  ++++   +    ++Y  +I   C++GN
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           V  A V+  EM +K   P   T+  LI G C  G+M  A  + N+M   G   + +  N+
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 409

Query: 548 LISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           LI    + GM +EA R +Q   E + L+
Sbjct: 410 LIDGYCESGMVDEALR-LQVVMEKKGLE 436



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 76/177 (42%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
           N K   K L FS V   ++ +  ++  ++   C+ G     + VF  M   G++PN    
Sbjct: 453 NRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITY 512

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              +    + G    A  L  +     +    +   SL++        D A+ +F E  +
Sbjct: 513 NVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQ 572

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
               P+  T+  +I GLS+ G  ++AF+ + +M   G +PD   Y++L+  L   +E
Sbjct: 573 RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADE 629


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 202/379 (53%), Gaps = 22/379 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRA------------ 204
           T N+++    ++G +     VF  +   G+ PN   +   +   C++             
Sbjct: 97  TLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKV 156

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G+  AA  LL +     V  +  MYN++++++ K    +EA  ++ E       PD  T+
Sbjct: 157 GQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTY 216

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           + LI G   +G++K A + F  M      PD+ T+N L+ G C+  ++  G  +   +  
Sbjct: 217 SALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF-AMMM 275

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K    P+VVTY S++ GYC + +++KA  I+N M   G+ P   ++N++I+GF K+  + 
Sbjct: 276 KQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVD 335

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  + ++M     +P+VVT++SLIDG C++G+++  LKL DEM  + + P++ T++ ++
Sbjct: 336 EAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSIL 395

Query: 445 NALCKENRLNDARRFLKQLK---WNDLVPK-----PFMYNPVIDGFCKAGNVDEANVIVA 496
           +ALCK ++++ A   L +LK   + DL  K      + Y  +I GFC  G  +EA  +++
Sbjct: 396 DALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLS 455

Query: 497 EMEEKRCKPDKVTFTILII 515
           +ME+    PD  T+ I+I+
Sbjct: 456 KMEDNGRIPDAKTYEIIIL 474



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 191/371 (51%), Gaps = 17/371 (4%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL Q  P   T   F +  +L +LVK N    A+ + ++        +  T NILI   S
Sbjct: 50  LLHQKNP---TPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVT-------------YNTLISGLCRVNEVARGHELL 319
           ++G+   +F  F ++   G  P+++T             Y TLI+GLC+V +     +LL
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLL 166

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           + V  K    P+VV Y ++I   CK+  +++A  +Y+EM S GI P  VT++ LI GF  
Sbjct: 167 RRVDGKL-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFI 225

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
           VG +  A  +  +M+     PDV TF+ L+DG+C++G++ +G  +   M  + + PNV T
Sbjct: 226 VGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 285

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L++  C   ++N A      +    + P    YN +I+GFCK   VDEA  +  +M 
Sbjct: 286 YCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMH 345

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K   P+ VT+T LI G C  G++  A+ + ++M   G  PD IT +S++  L K    +
Sbjct: 346 CKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVD 405

Query: 560 EAFRIMQRASE 570
           +A  ++ +  +
Sbjct: 406 KAIALLTKLKD 416



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 194/367 (52%), Gaps = 17/367 (4%)

Query: 217 FRPGEVTMSTFM--------YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           + P  +T++T +        Y +L+N L K   A  A+ + +       QP+   +N +I
Sbjct: 126 YDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTII 185

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             + ++  V +AF+ + +M S G SPD+VTY+ LISG   V ++    +L  ++  ++  
Sbjct: 186 DSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILEN-I 244

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PDV T+  ++ G+CK GKM +   ++  M   GIKP+ VT+  L+DG+  V  +  A  
Sbjct: 245 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANS 304

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M   G  PD  +++ +I+G+C+  ++++ + L  +M  KN+ PNV T+T LI+ LC
Sbjct: 305 IFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLC 364

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-------- 500
           K  +++ A + + ++    + P    Y+ ++D  CK   VD+A  ++ ++++        
Sbjct: 365 KSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFV 424

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           K    D   +T++I G C+KG   EA+++ +KM   G  PD  T   +I  L K    + 
Sbjct: 425 KGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDM 484

Query: 561 AFRIMQR 567
           A ++++ 
Sbjct: 485 AEKLLRE 491



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 153/313 (48%), Gaps = 9/313 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ S+C++ L +    ++  M S+G  P+       +S     GK   A  L ++  
Sbjct: 181 YNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMI 240

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +    + +N L++   K     E   +F    +   +P+  T+  L+ G   + +V 
Sbjct: 241 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 300

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA   F  M   G +PD  +YN +I+G C++ +V     L K++  K+   P+VVTYTS+
Sbjct: 301 KANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKN-IIPNVVTYTSL 359

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA--------EYMR 390
           I G CK GK+  A  + +EM+  G+ P  +T++ ++D   K   +  A        + + 
Sbjct: 360 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVF 419

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           E +   GY  DV  ++ +I G+C  G  N+ L L  +M+     P+  T+ I+I +L K+
Sbjct: 420 EDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKK 479

Query: 451 NRLNDARRFLKQL 463
           +  + A + L+++
Sbjct: 480 DENDMAEKLLREM 492



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 7/249 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C+ G     + VF  M   G  PN       +       + + A  + +  
Sbjct: 250 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTM 309

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G V   T  YN ++N   K    DEA+ +FK+       P+  T+  LI GL + G++
Sbjct: 310 AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI 369

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-------FKSEFSP 330
             A +   +M   G  PDI+TY++++  LC+ ++V +   LL ++K       F   ++ 
Sbjct: 370 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNL 429

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DV  YT +I G+C  G  ++A  + ++M   G  P A T+ ++I    K      AE + 
Sbjct: 430 DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLL 489

Query: 391 ERMLSFGYL 399
             M++ G L
Sbjct: 490 REMIARGLL 498


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 221/488 (45%), Gaps = 36/488 (7%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R  C +   L++++   +   P   L   +        N   +++N ++ +  E      
Sbjct: 73  RCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWRE 132

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
            ++ F Y ++ G  PN       +    +  + +  KGLL+      +      Y +L+N
Sbjct: 133 AELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLIN 192

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD-MGSFGCS 293
           AL K  N  +AV +F E       PD   +NILI G  R G+  KA E +   +      
Sbjct: 193 ALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVY 252

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P + TYN +I+GLC++ ++    E+   +K K+E SPD+ T++S+I G  K G  + A  
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMK-KNEKSPDLFTFSSMIHGLSKAGNFNAAEK 311

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVG------------------NMVSAEYMRERML- 394
           ++ EM   G+ P   T+N ++ G  + G                  N+VS   + + +L 
Sbjct: 312 VFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLD 371

Query: 395 ---------------SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
                            G   D  T+  LI+G C+NG LN+ L++ +E + +    + + 
Sbjct: 372 NKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFA 431

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           ++ +++ LCK+  L  A   + Q+K N       ++N +I+G+ +A  ++EA  ++ EM+
Sbjct: 432 YSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMK 491

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            K C P  V++  +I G C   R  +A     +ML  G  PD IT + LI  L +G   +
Sbjct: 492 SKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVD 551

Query: 560 EAFRIMQR 567
            A  +  +
Sbjct: 552 MALNLWHQ 559



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 232/530 (43%), Gaps = 88/530 (16%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
           +SP   L+++K   NP   L   + +  +    H    ++ ++R L +  L   V  + D
Sbjct: 8   ISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVD 67

Query: 181 YMRSDGHLPNSPMIEFFVSSCIRA-GKCDAAKGLLSQFR---------PGEVTMSTFMYN 230
            MR+          E    S I+A  KC      L+ F+         PG  +     +N
Sbjct: 68  LMRAQ----RCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRS-----FN 118

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ--------------------- 269
           S+LNA ++ N   EA   F  +      P+  T+NILI+                     
Sbjct: 119 SMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFEN 178

Query: 270 --------------GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
                          L++ G +  A E F +M   G +PD++ YN LI G  R  +  + 
Sbjct: 179 GLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKA 238

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           +E+ K +  +S   P V TY  +I+G CKLGK+D++  ++N M      P   TF+ +I 
Sbjct: 239 NEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIH 298

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN--- 432
           G  K GN  +AE + + M+  G  PDV T+++++ G  R G+LN+  +L + M   N   
Sbjct: 299 GLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCN 358

Query: 433 -------------------------------LSPNVYTFTILINALCKENRLNDARRFLK 461
                                          L  +  T+ +LIN LCK   LN A R L+
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           + +        F Y+ ++ G CK G +++A  ++ +M++ R K +   F  LI G+    
Sbjct: 419 EAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF 478

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           ++ EAIS+  +M    CAP  ++ N++I+ L K    ++A+  ++   E+
Sbjct: 479 KLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEE 528



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 202/433 (46%), Gaps = 35/433 (8%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +TYN+++  LC++G  D    +++ M+ +   P+       +    +AG  +AA+ + 
Sbjct: 254 SVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVF 313

Query: 215 SQ--------------------FRPGEV--------TMS------TFMYNSLLNALVKQN 240
            +                    FR G++         MS         YN L+  L+   
Sbjct: 314 QEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNK 373

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
             ++A+  ++       + D+ T+ +LI GL + G + KA     +  + G   D   Y+
Sbjct: 374 KVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYS 433

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           +++ GLC+   + +  EL+ ++K K+    +   + S+I+GY +  K+++A  +  EM S
Sbjct: 434 SMVHGLCKKGMLEQAVELIHQMK-KNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKS 492

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
               P+ V++N +I+G  K      A    + ML  G  PD++T+S LIDG CR  +++ 
Sbjct: 493 KDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDM 552

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L L  +   K L P++    I+I+ LC   +++ A     Q++  + VP    +N +++
Sbjct: 553 ALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIME 612

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G  KAG+  EA  I   + E   +PD +++ I   G C   R+ +AI      L  G  P
Sbjct: 613 GLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILP 672

Query: 541 DDITVNSLISCLL 553
           +  T N L+  ++
Sbjct: 673 NAPTWNVLVRAVV 685



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 139/296 (46%), Gaps = 1/296 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY L++  LC+ G  +    + +   ++G   ++      V    + G  + A  L+ Q 
Sbjct: 396 TYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQM 455

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +     +++ ++NSL+N  V+    +EA+ + +E       P   ++N +I GL +    
Sbjct: 456 KKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERF 515

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A+    +M   G  PD++TY+ LI GLCR  +V     L  +        PD+  +  
Sbjct: 516 SDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQC-INKRLKPDLQMHNI 574

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   K+D A  I+ +M      P  VT N +++G  K G+ V A  + +R+L  G
Sbjct: 575 IIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG 634

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
             PD+++++    G C   +++  ++   +   + + PN  T+ +L+ A+  +  L
Sbjct: 635 LQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPL 690



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 1/178 (0%)

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           FG  P + +F+S+++ +  + Q  +        +   +SPN+ T+ ILI   CK+ +   
Sbjct: 108 FGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEK 167

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
            +  L  +  N L P    Y  +I+   K+GN+ +A  +  EM  +   PD + + ILI 
Sbjct: 168 GKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILID 227

Query: 516 GHCMKGRMVEAISIFNKML-RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           G   KG  V+A  I+ ++L      P   T N +I+ L K G  +E+  +  R  +++
Sbjct: 228 GFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNE 285


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 198/397 (49%), Gaps = 6/397 (1%)

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMS 225
           ++ LHD++ +  + +++    P   +++F   +S+ ++  K D    L  +     +   
Sbjct: 63  DIKLHDAINLFREMVKTR---PFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRND 119

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            + +N ++N          A+ +  +  +L  +PD  T   L+ G  R   V  A     
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
            M   G  PDIV YN +I  LC+   V    +  KE+  K    P+VVTYT++++G C  
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG-IRPNVVTYTALVNGLCNS 238

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G+ + A  +  +M    I P+ +T++ L+D F K G ++ A+ + E M+     PD+VT+
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           SSLI+G C + ++++  ++ D M  K   P+V ++  LIN  CK  R+ D  +  +++  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             LV     YN +I GF + G+VD+A    ++M+     PD  T+ IL+ G C  G + +
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEK 418

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           A+ IF  M +     D +T  ++I  + K G   +A+
Sbjct: 419 ALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAW 455



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 189/348 (54%), Gaps = 12/348 (3%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  VT+      SL+N   ++N   +AV +  +   +  +PD   +N +I  L +   
Sbjct: 151 YEPDRVTIG-----SLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRR 205

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVV 333
           V  A +FF ++G  G  P++VTY  L++GLC   R N+ AR   LL+++  K + +P+V+
Sbjct: 206 VNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR---LLRDM-IKRKITPNVI 261

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY++++  + K GK+ +A  I+ EM    I P  VT++ LI+G      +  A  M + M
Sbjct: 262 TYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +S G  PDVV++++LI+G+C+  ++  G+KL  +M  + L  N  T+  LI    +   +
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A+ F  Q+    + P  + YN ++ G C  G +++A VI  +M++     D VT+T +
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTV 441

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           I G C  G++ +A  +F  +   G  PD +T  +++S L   G+ +E 
Sbjct: 442 IQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEV 489



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 182/349 (52%), Gaps = 4/349 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N LL+A+VK    D  + + K+   L  + D +TFNI+I       +V  A      M 
Sbjct: 88  FNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKML 147

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD VT  +L++G CR N V+    L+ ++  +  + PD+V Y ++I   CK  ++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM-VEIGYRPDIVAYNAIIDSLCKTRRV 206

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A   + E+   GI+P+ VT+  L++G    G    A  +   M+     P+V+T+S+L
Sbjct: 207 NDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSAL 266

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +D + +NG++ +  ++ +EM   ++ P++ T++ LIN LC  +R+++A +    +     
Sbjct: 267 LDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I+GFCKA  V++   +  +M ++    + VT+  LI G    G + +A  
Sbjct: 327 FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE 386

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
            F++M   G +PD  T N L+  L   G+  +A   F  MQ++  D ++
Sbjct: 387 FFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDI 435



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 195/398 (48%), Gaps = 11/398 (2%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L + +   T+N+V+   C          V   M   G+ P+   I   V+   R  +   
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 210 AKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           A  L+ +     +RP  V      YN+++++L K    ++A+  FKE  R   +P+  T+
Sbjct: 174 AVSLVDKMVEIGYRPDIVA-----YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTY 228

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
             L+ GL   G    A     DM     +P+++TY+ L+    +  +V    E+ +E+  
Sbjct: 229 TALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM-V 287

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +    PD+VTY+S+I+G C   ++D+A  +++ M S G  P  V++N LI+GF K   + 
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
               +  +M   G + + VT+++LI G+ + G +++  +   +M    +SP+++T+ IL+
Sbjct: 348 DGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
             LC    L  A    + ++ +++      Y  VI G CK G V++A  +   +  K  K
Sbjct: 408 GGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLK 467

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           PD VT+T ++ G C KG   E  +++ KM + G   +D
Sbjct: 468 PDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND 505



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 156/301 (51%), Gaps = 3/301 (0%)

Query: 272 SRIGEVK--KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           +R+ ++K   A   F +M      P IV +N L+S + ++ +      L K+++      
Sbjct: 59  TRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLG-IR 117

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            D+ T+  VI+ +C   ++  A  +  +M   G +P  VT   L++GF +   +  A  +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M+  GY PD+V ++++ID  C+  ++N  L    E+  K + PNV T+T L+N LC 
Sbjct: 178 VDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCN 237

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             R NDA R L+ +    + P    Y+ ++D F K G V EA  I  EM      PD VT
Sbjct: 238 SGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVT 297

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           ++ LI G C+  R+ EA  +F+ M+  GC PD ++ N+LI+   K     +  ++ ++ S
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS 357

Query: 570 E 570
           +
Sbjct: 358 Q 358



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 161/317 (50%), Gaps = 1/317 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++ SLC+    +     F  +   G  PN       V+    +G+ + A  LL   
Sbjct: 192 AYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDM 251

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              ++T +   Y++LL+A VK     EA  +F+E  R+   PD  T++ LI GL     +
Sbjct: 252 IKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M S GC PD+V+YNTLI+G C+   V  G +L +++  +     + VTY +
Sbjct: 312 DEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG-LVNNTVTYNT 370

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ ++G +DKA   +++M+S G+ P   T+N+L+ G    G +  A  + E M    
Sbjct: 371 LIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSE 430

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+VT++++I G C+ G++     L   +  K L P++ T+T +++ LC +   ++  
Sbjct: 431 MDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVE 490

Query: 458 RFLKQLKWNDLVPKPFM 474
               ++K   L+    M
Sbjct: 491 ALYTKMKQEGLMKNDSM 507


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 3/343 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           S +  N++L ++VK    D +V+ F KE  +    PD  TFNILI  L   G  KK+   
Sbjct: 157 SVYTCNAILGSIVKSCE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYL 215

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G +P IVTYNT++   C+        ELL  +  K   + DV TY  +I   C
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKG-VNADVCTYNMLIHDLC 274

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           +  +  K   +  +M    I P+ VT+N L++GF   G ++ A  +   ML+FG  P+ V
Sbjct: 275 RSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHV 334

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           TF++LIDG+   G   + LK+   M+ K L     ++ +L++ LCK    + AR F  ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           K N +      Y  +IDG CK G +DEA V++ EM +    PD VT++ LI G C  GR+
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRL 454

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             A  I  ++ R+G +P+ I  ++LI    + G   E  RI +
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYE 497



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 198/413 (47%), Gaps = 1/413 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +++++R     G+      +F  M   G  P+       + S +++ +  +    L +  
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEML 185

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             ++      +N L+N L  + +  ++ Y+ ++  +    P   T+N ++    + G  K
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A E    M   G + D+ TYN LI  LCR N  A+G+ LL++++ K    P+ VTY ++
Sbjct: 246 AAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMR-KRMIHPNEVTYNTL 304

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ++G+   GK+  A  + NEM + G+ P+ VTFN LIDG    GN   A  M   M + G 
Sbjct: 305 LNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGL 364

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +   V++  L+DG C+N + +        MK   +     T+T +I+ LCK   L++A  
Sbjct: 365 IGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L ++  + + P    Y+ +I+GFC+ G +  A  IV  +      P+ + ++ LI   C
Sbjct: 425 MLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             G + E I I+  M+  G  PD  T N L++ L K G   EA   M+  + D
Sbjct: 485 RMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 199/409 (48%), Gaps = 5/409 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+   C+ G   +   + D+M   G   +       +    R+ +      LL   
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  +   YN+LLN    +     A  +  E       P+  TFN LI G    G  
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE--VARGHELLKEVKFKSEFSPDVVTY 335
           K+A + F+ M + G     V+Y  L+ GLC+  E  +ARG  +  +   ++      +TY
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK---RNGVCVGRITY 406

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I G CK G +D+A  + NEM+  GI P  VT++ LI+GF +VG + +A+ +  R+  
Sbjct: 407 TGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYR 466

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ + +S+LI   CR G L + +++ + M  +  +P+ +TF +L+ +LCK  ++ +
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAE 526

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A  F++ +  + ++P    ++ +I+G+  +G   +A  +  EM +    P   T+  L+ 
Sbjct: 527 AEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G C  G ++ A      +  +  A D +  N+LI+ + K G  ++A  +
Sbjct: 587 GLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSL 635



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 183/412 (44%), Gaps = 4/412 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++      G     + + + M + G  PN       +   I  G    A  +    
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMM 359

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y  LL+ L K    D A   +    R        T+  +I GL + G +
Sbjct: 360 EAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M   G  PDIVTY+ LI+G CRV  +    E++  + ++   SP+ + Y++
Sbjct: 420 DEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRI-YRVGLSPNGIIYST 478

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C++G + +   IY  M   G  P   TFNVL+    K G +  AE     M S G
Sbjct: 479 LIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+ V+F  LI+GY  +G+  +   + DEM      P  +T+  L+  LCK   L  A 
Sbjct: 539 ILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAE 598

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +FLK L+         M N +I   CK+GN+D+A  +  EM ++   PD  T+T LI G 
Sbjct: 599 KFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGL 658

Query: 518 CMKGRMVEAISIFNK--MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C KG+ V AI +F K    R    P+ +     +  + K G     F   Q+
Sbjct: 659 CRKGKTVIAI-LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQ 709



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 200/426 (46%), Gaps = 4/426 (0%)

Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           RV LS N     Y+ ++ + C MG       +++ M  +G+ P+       V+S  +AGK
Sbjct: 466 RVGLSPNGII--YSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGK 523

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
              A+  +       +  +   ++ L+N         +A  +F E  ++   P  +T+  
Sbjct: 524 VAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           L++GL + G +  A +F   + +   + D V  NTLI+ +C+   + +   L  E+  +S
Sbjct: 584 LLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRS 643

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVS 385
              PD  TYTS+ISG C+ GK   A     E  + G + P+ V +   +DG  K G   +
Sbjct: 644 IL-PDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKA 702

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
             Y R++M   G   DVVT +++IDGY R G++ +   L  EM  +N  PN+ T+ IL++
Sbjct: 703 GFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLH 762

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              K   ++ +    + +  + ++P       +I G C++  ++    I+     +  + 
Sbjct: 763 GYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEV 822

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D+ TF +LI   C  G +  A  + N M  +G + D  T ++++S L +     E+  ++
Sbjct: 823 DRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVL 882

Query: 566 QRASED 571
              S+ 
Sbjct: 883 HEMSKQ 888



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/477 (23%), Positives = 199/477 (41%), Gaps = 70/477 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++ SLC+ G     +     M SDG LPN+   +  ++    +G+   A  +  + 
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEM 569

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + F Y SLL  L K  +   A    K    + +  DT   N LI  + + G +
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNL 629

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV-----------ARGH---------- 316
            KA   F +M      PD  TY +LISGLCR  +            ARG+          
Sbjct: 630 DKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTC 689

Query: 317 ---ELLKEVKFKSEF-----------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
               + K  ++K+ F           + DVVT  ++I GY ++GK++K   +  EM +  
Sbjct: 690 FVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQN 749

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P+  T+N+L+ G+ K  ++ ++  +   M+  G LPD +T  S+I G C +  L  GL
Sbjct: 750 QGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGL 809

Query: 423 KLCDEMKGKNLSPNVYTFTILINALC---------------------------------- 448
           K+      + +  + +TF +LI+  C                                  
Sbjct: 810 KILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVL 869

Query: 449 -KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            + +R  ++R  L ++    + P+   Y  +++G C+ G++  A V+  EM   +  P  
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           V  + ++      G+  EA  +   ML++   P   +  +L+    K G   EA  +
Sbjct: 930 VAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALEL 986



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 198/477 (41%), Gaps = 72/477 (15%)

Query: 178  VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            VFD M   GH P        +    + G   AA+  L   +     + T M N+L+ A+ 
Sbjct: 565  VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMC 624

Query: 238  KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDI 296
            K  N D+AV +F E  +    PD++T+  LI GL R G+   A  F  +  + G   P+ 
Sbjct: 625  KSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNK 684

Query: 297  VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            V Y   + G+ +  +   G    +++  K   + DVVT  ++I GY ++GK++K   +  
Sbjct: 685  VMYTCFVDGMFKAGQWKAGFYFRQQMD-KLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLF 743

Query: 357  EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT------------ 404
            EM +    P+  T+N+L+ G+ K  ++ ++  +   M+  G LPD +T            
Sbjct: 744  EMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESN 803

Query: 405  -----------------------FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
                                   F+ LI   C NG++N    + + M    +S +  T  
Sbjct: 804  MLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCD 863

Query: 442  ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV------------- 488
             +++ L + +R  ++R  L ++    + P+   Y  +++G C+ G++             
Sbjct: 864  AIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAH 923

Query: 489  ----------------------DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
                                  DEA++++  M + +  P   +FT L+   C  G + EA
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEA 983

Query: 527  ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
            + +   M   G   D ++ N LI+ L   G    AF + +    D  L   +  KA+
Sbjct: 984  LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKAL 1040



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 178/433 (41%), Gaps = 37/433 (8%)

Query: 160  NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
            N ++ ++C+ G  D    +F  M     LP+S      +S   R GK   A     +   
Sbjct: 617  NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 220  -GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             G +  +  MY   ++ + K        Y  ++  +L    D  T N +I G SR+G+++
Sbjct: 677  RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 279  KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            K  +  ++MG+    P++ TYN L+ G  +   V+    L + +   S   PD +T  S+
Sbjct: 737  KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMIL-SGILPDKLTCYSI 795

Query: 339  ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID----------GFGKVGNMVS--- 385
            I G C+   ++    I       G++    TFN+LI            F  V  M S   
Sbjct: 796  ILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI 855

Query: 386  -----------------AEYMRERMLSF-----GYLPDVVTFSSLIDGYCRNGQLNQGLK 423
                               +   RM+       G  P+   +  L++G CR G +     
Sbjct: 856  SLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFV 915

Query: 424  LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
            + +EM    + P     + ++ AL K  + ++A   L+ +    LVP    +  ++  FC
Sbjct: 916  VKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFC 975

Query: 484  KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
            K GNV EA  +   M     K D V++ +LI G C KG M  A  +F +M R G   +  
Sbjct: 976  KNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVT 1035

Query: 544  TVNSLISCLLKGG 556
            T  +L+  +L  G
Sbjct: 1036 TYKALVGGILSQG 1048



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 99/448 (22%), Positives = 177/448 (39%), Gaps = 57/448 (12%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVF-DYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            TY  ++  LC  G    + ++F     + G+L PN  M   FV    +AG+  A      
Sbjct: 650  TYTSLISGLCRKG-KTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQ 708

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            Q     +T      N++++   +    ++   +  E       P+  T+NIL+ G S+  
Sbjct: 709  QMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRK 768

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             V  +F  +  M   G  PD +T  ++I G+C  N +  G ++LK    +     D  T+
Sbjct: 769  HVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRG-VEVDRHTF 827

Query: 336  TSVISGYCKLGKMDKATGIYNEM---------NSC------------------------- 361
              +IS  C  G+++ A  + N M         N+C                         
Sbjct: 828  NMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSK 887

Query: 362  -GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
             GI P +  +  L++G  +VG++ +A  ++E M++    P  V  S+++    + G+ ++
Sbjct: 888  QGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 421  GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
               L   M    L P + +FT L++  CK   + +A      +    L      YN +I 
Sbjct: 948  ASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLIT 1007

Query: 481  GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI----------- 529
            G C  G++  A  +  EM+      +  T+  L+ G   +G       I           
Sbjct: 1008 GLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGFI 1067

Query: 530  ----FNKMLRIGCAPDDITVNSLISCLL 553
                FN M+     P  I+VN+ +  L 
Sbjct: 1068 TAMSFNHMINF---PQQISVNAYLKHLF 1092



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 11/340 (3%)

Query: 143  LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
            L F   N +   +  TYN+++    +     +  +++  M   G LP+       +    
Sbjct: 741  LLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGIC 800

Query: 203  RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
             +   +    +L  F    V +    +N L++        + A  M      L    D  
Sbjct: 801  ESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKN 860

Query: 263  TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            T + ++  L+R    +++    ++M   G SP+   Y  L++GLCRV ++     ++KE 
Sbjct: 861  TCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAF-VVKEE 919

Query: 323  KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                +  P  V  ++++    K GK D+A+ +   M    + P+  +F  L+  F K GN
Sbjct: 920  MIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGN 979

Query: 383  MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
            +  A  +R  M + G   D+V+++ LI G C  G +    +L +EMK      NV T+  
Sbjct: 980  VTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKA 1039

Query: 443  LINALCKENR--------LND--ARRFLKQLKWNDLVPKP 472
            L+  +  +          L D  AR F+  + +N ++  P
Sbjct: 1040 LVGGILSQGTEFSGTDIILKDLLARGFITAMSFNHMINFP 1079


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 185/334 (55%), Gaps = 1/334 (0%)

Query: 229  YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
            YN L++ L+  N  ++A+ +F++     + P+ +T+N+L+    +   + K ++ + +M 
Sbjct: 799  YNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR 858

Query: 289  SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            S GC P+ +T+N +IS L + N + +  +L  E+    +FSP   TY  +I G  K G+ 
Sbjct: 859  SRGCEPNAITHNIIISALVKSNNLNKALDLYYEL-MSGDFSPTPCTYGPLIDGLLKAGRS 917

Query: 349  DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            ++A  I+ EM   G  P++V +N+LI+GFGK G +  A  + ++M+  G  PD+ +++ L
Sbjct: 918  EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTIL 977

Query: 409  IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
            ++  C  G++++ ++  +E+K   L P+  ++  +IN L K  RL++A     ++K   +
Sbjct: 978  VECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGI 1037

Query: 469  VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
             P  + YN +I     AG VD A  +  E++    +P   T+  LI GH + G   +A S
Sbjct: 1038 SPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFS 1097

Query: 529  IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            +F KM+ +GC+P+  T   L +   + G+ +  F
Sbjct: 1098 VFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPF 1131



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 211/442 (47%), Gaps = 4/442 (0%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           + ++K + +P     + +      +  H+    N ++  L E    + +  VFD M+   
Sbjct: 102 MTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKV 161

Query: 187 HLPN-SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
              N +  +  F +  I+ G   A   L      G + ++ + YN L++ L+     +EA
Sbjct: 162 IYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFI-LNAYSYNGLIHLLLP-GFCNEA 219

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
           + ++K       +P   T++ L+  L R G+ +K      +M S G  P+I TY   I  
Sbjct: 220 LKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRA 279

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           L R   +     + KE+       PDV+TYT +I   C  GK+DKA  +Y +M +    P
Sbjct: 280 LGRARRIDDAWGIFKEMD-DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSP 338

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             VT+  L+D FGKVG++ + +     M   GY PDVVT++ LI+  C++G +++   + 
Sbjct: 339 DRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDML 398

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K + PN++T+  +I  L K  RL++A   L+ ++   + P  F Y   ID + K+
Sbjct: 399 DVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKS 458

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G+  +A      M+++   P        +      GR+ EA  IFN + + G +PD +T 
Sbjct: 459 GDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTY 518

Query: 546 NSLISCLLKGGMPNEAFRIMQR 567
           N L+ C  K G  ++A +++  
Sbjct: 519 NMLMKCYSKAGQIDKATQLLSE 540



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 204/415 (49%), Gaps = 1/415 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S KTY+ +M +L   G    +  + + M+S G  PN       + +  RA + D A G+ 
Sbjct: 234 SMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIF 293

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +            Y  L++AL      D+A  ++ +       PD  T+  L+    ++
Sbjct: 294 KEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKV 353

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+++    F+ +M   G +PD+VTY  LI  LC+  +V R  ++L  +  K  F P++ T
Sbjct: 354 GDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIF-PNLHT 412

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I G  K  ++D+A  +   M S G+KP+A ++ + ID +GK G+   A    E M 
Sbjct: 413 YNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMK 472

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G +P +   ++ +      G++++   + +++    LSP+  T+ +L+    K  +++
Sbjct: 473 KRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQID 532

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A + L ++      P   + N +I+   KAG VD A  +   ++  +  P  VT+ IL+
Sbjct: 533 KATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILL 592

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            G   +G++++A+ +F  M   GC P+ IT NSL+ CL K    + A ++  R +
Sbjct: 593 TGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMT 647



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 205/464 (44%), Gaps = 35/464 (7%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           ++ L  +  TY + +R+L      D    +F  M  +G  P+       + +   AGK D
Sbjct: 263 SIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLD 322

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            AK L  + R    +     Y +L++   K  + +     + E       PD  T+ ILI
Sbjct: 323 KAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILI 382

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK-------- 320
           + L + G+V +AF+    M + G  P++ TYNT+I GL +   +    ELL+        
Sbjct: 383 EALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVK 442

Query: 321 --------------------------EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
                                     E   K    P +    + +    + G++ +A  I
Sbjct: 443 PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDI 502

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           +N+++ CG+ P +VT+N+L+  + K G +  A  +   M+S G  PDV+  +SLI+   +
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYK 562

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G+++   K+   +K   L+P V T+ IL+  L KE ++  A      +  +   P    
Sbjct: 563 AGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTIT 622

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           +N ++D   K   VD A  +   M    C PD +T+  +I G   +GR+  A   F++M 
Sbjct: 623 FNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK 682

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
           +   +PD +T+ +LI  +++ G   +A +++        LQ  S
Sbjct: 683 KF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNS 725



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 199/398 (50%), Gaps = 2/398 (0%)

Query: 171  LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
            + D+++VV +++       NS      +   +   + + A           V     +  
Sbjct: 705  VEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVML 764

Query: 231  SLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
             L+  L K+  A +A  +F ++ + L   P   ++N L+ GL      +KA E F DM S
Sbjct: 765  PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS 824

Query: 290  FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
             G  P+  TYN L+    +   + + ++L  E++ +    P+ +T+  +IS   K   ++
Sbjct: 825  AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRG-CEPNAITHNIIISALVKSNNLN 883

Query: 350  KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            KA  +Y E+ S    P+  T+  LIDG  K G    A  + E ML +G  P+ V ++ LI
Sbjct: 884  KALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILI 943

Query: 410  DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            +G+ ++G+++   +L  +M  + + P++ ++TIL+  LC   R+++A ++ ++LK   L 
Sbjct: 944  NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD 1003

Query: 470  PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
            P    YN +I+G  K+  +DEA  + +EM+ +   PD  T+  LI+   + G++  A+ +
Sbjct: 1004 PDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKM 1063

Query: 530  FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            + ++  +G  P   T N+LI      G  ++AF + ++
Sbjct: 1064 YEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKK 1101



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 186/426 (43%), Gaps = 5/426 (1%)

Query: 145 FSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           F R+ NL L  +  TYN+++  L + G       +F  M   G  PN+      +    +
Sbjct: 573 FGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSK 632

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
               D A  +  +            YN+++  L+++   D A + F +  +  S PD  T
Sbjct: 633 NDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLS-PDYVT 691

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEV 322
              LI G+ R G V+ A +   +     C   +   +  L+  +    E+        E+
Sbjct: 692 LCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAIS-FAEI 750

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVG 381
              +    D      +I   CK  K   A  ++++   + GI P+  ++N L+DG     
Sbjct: 751 LVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSN 810

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
               A  + E M S G  P+  T++ L+D + ++ ++N+   L  EM+ +   PN  T  
Sbjct: 811 FTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHN 870

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           I+I+AL K N LN A     +L   D  P P  Y P+IDG  KAG  ++A  I  EM + 
Sbjct: 871 IIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY 930

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C P+ V + ILI G    G +  A  +F KM++ G  PD  +   L+ CL   G  +EA
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990

Query: 562 FRIMQR 567
            +  + 
Sbjct: 991 VQYFEE 996



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%)

Query: 156  FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             K+Y +++  LC  G  D     F+ ++  G  P++    F ++   ++ + D A  L S
Sbjct: 971  LKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            + +   ++   + YN+L+  L      D AV M++E   +  +P  +T+N LI+G S  G
Sbjct: 1031 EMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSG 1090

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTL 302
               +AF  F  M   GCSP+  T+  L
Sbjct: 1091 NKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 52/124 (41%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +YN ++  L +    D    +F  M++ G  P+       +     AGK D A  +  + 
Sbjct: 1008 SYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEEL 1067

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            +   +  S F YN+L+       N D+A  +FK+   +   P+T TF  L     R G V
Sbjct: 1068 QLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLV 1127

Query: 278  KKAF 281
               F
Sbjct: 1128 HNPF 1131


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 224/450 (49%), Gaps = 5/450 (1%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLE-FSRVNL-SLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
           ++P+   ++I+ L N K+  K +  F ++ +     + + YN ++  L   G ++ V  +
Sbjct: 153 VTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHEL 212

Query: 179 FDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           ++ M ++GH  P++      +S+  + G+ D+A  LL++ +   +  +  +Y  L+    
Sbjct: 213 YNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFF 272

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K NN   A+ +F+E    Y +PD +T+  LI+GL + G   +A+ FF++M   GC PD V
Sbjct: 273 KLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTV 332

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG-YCKLGKMDKATGIYN 356
             N +I+ L +   +    +L +E+    +  P VVTY ++I   +    ++ + +  + 
Sbjct: 333 VINNMINFLGKAGRLDDAVKLFEEMG-TLQCIPSVVTYNTIIKALFESKSRISEISSWFE 391

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M   GI PS  T+++LIDGF K      A  + E M   G+ P    + SLID   +  
Sbjct: 392 RMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 451

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           + +   +L  E+K    S +   + ++I  L K  RL+DA     ++      P  + YN
Sbjct: 452 RYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYN 511

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G  +AG +DEA   +  M+E  C PD  ++ I++ G    G    A+ + + M + 
Sbjct: 512 ALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 571

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              PD ++ N+++  +   G+  EA ++M+
Sbjct: 572 AIKPDAVSYNTVLGAMSHAGLFEEAAKLMK 601



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 188/401 (46%), Gaps = 8/401 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ + C++G  DS   + + M+ +G  P + +    ++   +      A GL  + 
Sbjct: 228 TYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEM 287

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R        F Y  L+  L K    DEA   F E  R   +PDT   N +I  L + G +
Sbjct: 288 RHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRL 347

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGL----CRVNEVARGHELLKEVKFKSEFSPDVV 333
             A + F +MG+  C P +VTYNT+I  L     R++E++   E +K     S  SP   
Sbjct: 348 DDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMK----GSGISPSPF 403

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+ +I G+CK  + +KA  +  EM+  G  P    +  LID  GK      A  + + +
Sbjct: 404 TYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQEL 463

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                      ++ +I    + G+L+  + L DEM     +PNVY +  L++ L +   L
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGML 523

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A   +++++ +  +P    YN +++G  K G    A  +++ M++   KPD V++  +
Sbjct: 524 DEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTV 583

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +      G   EA  +  +M  +G   D IT +S++  + K
Sbjct: 584 LGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 169/375 (45%), Gaps = 71/375 (18%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +I+ L     + KA   FY +    C P    YN++I  L    +  + HEL  E+  + 
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD VTY+++IS +CKLG+ D A  + NEM   G++P+A  + +LI  F K+ N+  A
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + E M      PDV T++ LI G  + G+ ++      EM+ +   P+      +IN 
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINF 340

Query: 447 LCKENRLNDARR------------------------------------FLKQLKWNDLVP 470
           L K  RL+DA +                                    + +++K + + P
Sbjct: 341 LGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISP 400

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI---------------- 514
            PF Y+ +IDGFCK    ++A +++ EM+EK   P    +  LI                
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELF 460

Query: 515 ------------------IGHCMK-GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
                             I H  K GR+ +A+++F++M ++GC P+    N+L+S L + 
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARA 520

Query: 556 GMPNEAFRIMQRASE 570
           GM +EA   M+R  E
Sbjct: 521 GMLDEALTTMRRMQE 535



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++   C+    +   ++ + M   G  P        + +  +A + D A  L  + 
Sbjct: 404 TYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQEL 463

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    + S  +Y  ++  L K    D+AV +F E  +L   P+ + +N L+ GL+R G +
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGML 523

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   GC PDI +YN +++GL +     R  E+L  +K +S   PD V+Y +
Sbjct: 524 DEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK-QSAIKPDAVSYNT 582

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           V+      G  ++A  +  EMN  G +   +T++ +++  GKV +
Sbjct: 583 VLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 70/157 (44%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S + Y ++++ L + G  D    +FD M   G  PN       +S   RAG  D A   +
Sbjct: 471 SARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTM 530

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +          YN +LN L K      A+ M     +   +PD  ++N ++  +S  
Sbjct: 531 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHA 590

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           G  ++A +   +M   G   D++TY++++  + +V+ 
Sbjct: 591 GLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 2/145 (1%)

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL-VPKPFMYNPVIDGFCKAGN 487
           K +N   +  T+  LI  L    +  +  + ++++  N + V  P   + +I     A  
Sbjct: 111 KKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKM 170

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVN 546
           + +A  I  +++ ++C+P    +  +II    +G+  +   ++N+M   G C PD +T +
Sbjct: 171 ISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYS 230

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
           +LIS   K G  + A R++    ++
Sbjct: 231 ALISAFCKLGRQDSAIRLLNEMKDN 255


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 197/400 (49%), Gaps = 18/400 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LCE G     + +FD M+  G  PN       +S   +    ++A  L  + 
Sbjct: 215 TYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQEL 274

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +  ++ +L++   K     EA  MF++  R    P    +N L+ G  R G+ 
Sbjct: 275 LNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDA 334

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   + +M   G  PD  T + ++ GLC   ++      L+ V+ +   + +   Y +
Sbjct: 335 QEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR-EDGVNLNAAAYNA 393

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YC+ G +++A      M   G++P+ V+++ LIDG  K+G M  A  +   M++ G
Sbjct: 394 LIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKG 453

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT+++LI G+ +NG ++   +   EM    +SPN  T ++L++ LC+ENR+ DA 
Sbjct: 454 IEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAV 513

Query: 458 RFLKQ---LKWND--------------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           RF+ +   +K++D              L+P   +Y  +I G    G   EA  + + M +
Sbjct: 514 RFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRK 573

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
                D  T+T+LI G CM G ++ A+ ++  M++IG  P
Sbjct: 574 SGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 177/342 (51%), Gaps = 1/342 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N++L+ LVK   +  A  +F E  R    P   T+N LI      G V KA E +  M +
Sbjct: 147 NAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVA 206

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               P+++TY ++I  LC    +     L   +K ++   P+  TY  ++SG+C+   ++
Sbjct: 207 RQIDPNVITYTSMICVLCEEGCIGDAERLFDAMK-EAGMRPNQYTYNVLMSGHCQGDDVN 265

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  +Y E+ + G+ P+AV F  LIDGF K      A+ M   M  FG  P V  ++SL+
Sbjct: 266 SAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLM 325

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG  R+G   + L L  EM    L P+ +T +I++  LC   ++  A RFL+ ++ + + 
Sbjct: 326 DGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVN 385

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                YN +ID +C+ GN++EA      M E   +P+ V+++ LI GH   G+M  A++I
Sbjct: 386 LNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAI 445

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + +M+  G  P+ +T  +LI    K G  + AFR  +   E+
Sbjct: 446 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIEN 487



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 184/405 (45%), Gaps = 4/405 (0%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           +L +MGL D    VF   R    LP  P     +   ++A +   A  L  +     +  
Sbjct: 120 ALSQMGLLDEALYVF---RRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVP 176

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   YN+L+NA   Q    +A  M+ +       P+  T+  +I  L   G +  A   F
Sbjct: 177 SVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLF 236

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M   G  P+  TYN L+SG C+ ++V     L +E+   S   P+ V +T++I G+CK
Sbjct: 237 DAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQEL-LNSGLIPNAVVFTTLIDGFCK 295

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
             +  +A  ++ +M   G+ P+   +N L+DG  + G+   A  + + M   G  PD  T
Sbjct: 296 AKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFT 355

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
            S ++ G C  GQ+    +  + ++   ++ N   +  LI+  C+   L +A     ++ 
Sbjct: 356 CSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMT 415

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    Y+ +IDG  K G +  A  I  EM  K  +P+ VT+T LI GH   G + 
Sbjct: 416 EVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID 475

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            A     +M+  G +P+ ITV+ L+  L +     +A R +   S
Sbjct: 476 AAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHS 520



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 124/242 (51%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P +    +V+ G  K  +   A  +++EM   G+ PS VT+N LI+     G +  A+ M
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            ++M++    P+V+T++S+I   C  G +    +L D MK   + PN YT+ +L++  C+
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            + +N A    ++L  + L+P   ++  +IDGFCKA    EA  +  +M      P    
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  L+ G    G   EA+S++ +M R+G  PD+ T + ++  L  GG    A R ++   
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380

Query: 570 ED 571
           ED
Sbjct: 381 ED 382



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 97/246 (39%), Gaps = 19/246 (7%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
           ++  +FLE  R +  +N +   YN ++   C  G  +        M   G  PN      
Sbjct: 370 QVAARFLEGVRED-GVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSS 428

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +    + GK   A  + ++     +  +   Y +L++   K    D A    KE     
Sbjct: 429 LIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENG 488

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEF--------FYDMGSFGCS---------PDIVTY 299
             P+  T ++L+ GL R   V+ A  F        + D+ SF  +         P+   Y
Sbjct: 489 ISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIY 548

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
            TLI GL    +     +L   ++ KS    D  TYT +I G C LG +  A  +Y +M 
Sbjct: 549 MTLIYGLYLDGQHYEAGKLFSYMR-KSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMM 607

Query: 360 SCGIKP 365
             G+KP
Sbjct: 608 KIGVKP 613


>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 208/458 (45%), Gaps = 40/458 (8%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N   + S   ++ +MR LC  G  D+   + + M   G +P   M    ++   + G  +
Sbjct: 112 NFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIE 171

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A GL+ + R    + +   YN+L+  L   NN D+A+Y+F    +   +P+  T NI++
Sbjct: 172 KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIV 231

Query: 269 QGLS---------------------------------------RIGEVKKAFEFFYDMGS 289
             L                                        + G V +A E + +M  
Sbjct: 232 HALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQ 291

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
                D V YN +I GLC    +   +  + ++  K   +PDV TY ++IS  CK GK D
Sbjct: 292 KNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDM-VKRGVNPDVFTYNTLISALCKAGKFD 350

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  ++  M + G+ P  +++ V+I G    G++  A    + ML    LP+V+ ++ +I
Sbjct: 351 VACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVI 410

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DGY R G  +  L + + M    + PNVYT   LI+   K  RL DA     +++   + 
Sbjct: 411 DGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 470

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YN ++   C  G++  A  +  EM ++ C+PD +T+T L+ G C KGR+ EA S+
Sbjct: 471 PDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESL 530

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            ++M   G   D +    L+    +   P+EA+ + ++
Sbjct: 531 LSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLVYKK 568



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 184/398 (46%), Gaps = 13/398 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC--DAAKGLLS 215
           +YN +++ LC +   D    +F  +   G  PN       V +  + G    +  K L  
Sbjct: 191 SYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEE 250

Query: 216 QFRPGEVT--MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
                +V   +       L+++  K  N  +A+ ++KE  +     D+  +N++I+GL  
Sbjct: 251 ILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCS 310

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G +  A+ F  DM   G +PD+ TYNTLIS LC+  +     +L   ++     +PD +
Sbjct: 311 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQ-NVGVAPDQI 369

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y  +I G C  G +D+A      M    + P  + +NV+IDG+G+ G+   A  +   M
Sbjct: 370 SYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLM 429

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           LS+G  P+V T ++LI GY + G+L     + +EM+   + P+  T+ +L+ A C    L
Sbjct: 430 LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHL 489

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A +   ++      P    Y  ++ G C  G + EA  +++ M+      D V F IL
Sbjct: 490 RLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLIL 549

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
           +  +    R  EA  ++ K L        +T N  +SC
Sbjct: 550 VKKYTRLQRPDEAYLVYKKWL--------VTRNGGVSC 579



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 1/233 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   +N    TYN ++ +LC+ G  D    +   M++ G  P+    +  +      G  
Sbjct: 325 VKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDV 384

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A   L       +     ++N +++   +  +   A+ +         +P+ +T N L
Sbjct: 385 DRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNAL 444

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  + G +  A+    +M S    PD  TYN L+   C +  +    +L  E+  K  
Sbjct: 445 IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEM-LKRG 503

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
             PD++TYT ++ G C  G++ +A  + + M   GI    V F +L+  + ++
Sbjct: 504 CQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRL 556



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 10/183 (5%)

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           +F Y   +   SS++   C  G+++  L L ++M      P +     L+N LCK   + 
Sbjct: 112 NFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIE 171

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   +++++     P    YN +I G C   NVD+A  + + + +   KP++VT  I++
Sbjct: 172 KADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIV 231

Query: 515 IGHCMKG-------RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              C KG       +++E I   ++   +    D +T   L+    K G   +A  + + 
Sbjct: 232 HALCQKGVIGNNNTKLLEEILDSSQ---VNAPLDIVTCTILMDSCFKNGNVVQALEVWKE 288

Query: 568 ASE 570
            S+
Sbjct: 289 MSQ 291


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 223/457 (48%), Gaps = 19/457 (4%)

Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKT---------YNLVMRSLCEMGL 171
           ++P    +V++ L N K+        R  +++ +  KT         YN ++  L   G 
Sbjct: 124 VTPTELSDVVRMLGNAKM-------VRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQ 176

Query: 172 HDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           ++ V  +++ M ++GH  P++      +S+  + G+ D+A  LL++ +   +  +T +Y 
Sbjct: 177 YEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYT 236

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            L+    K N+A  A+ +F+E    Y +PD +T+  LI+GL + G + +A+ FF +M   
Sbjct: 237 MLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQRE 296

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG-YCKLGKMD 349
           GC PD V  N +I+ L +   +    +L +E++      P VVTY ++I   +    +  
Sbjct: 297 GCRPDTVFMNNMINFLGKAGRLDDAMKLFQEME-TLRCIPSVVTYNTIIKALFESKSRAS 355

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +    +  M   GI PS+ T+++LIDGF K   M  A  + E M   G+ P    + SLI
Sbjct: 356 EVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLI 415

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           D   +  + +   +L  E+K    S +   + ++I  L K  RL+DA     ++      
Sbjct: 416 DALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCA 475

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P  + YN ++ G  + G +DEA   +  M+E  C PD  ++ I++ G    G    A+ +
Sbjct: 476 PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEM 535

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            + M +    PD ++ N+++  L   GM  EA ++M+
Sbjct: 536 LSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMK 572



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 170/365 (46%), Gaps = 71/365 (19%)

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V++A   FY + +  C P    YN++I  L    +  + H+L  E+  +    PD VTY+
Sbjct: 142 VRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYS 201

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSA----------------------------- 367
           ++IS +CKLG+ D A  + NEM   G++P+                              
Sbjct: 202 ALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQ 261

Query: 368 ------VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
                  T+  LI G GK G +  A +    M   G  PD V  +++I+   + G+L+  
Sbjct: 262 YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 321

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCK-ENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
           +KL  EM+     P+V T+  +I AL + ++R ++   + +++K + + P  F Y+ +ID
Sbjct: 322 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 381

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI-------------------------- 514
           GFCK   +++A +++ EM+EK   P    +  LI                          
Sbjct: 382 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 441

Query: 515 --------IGHCMK-GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                   I H  K GR+ +AI++F++M ++GCAPD    N+L+S L + GM +EA   M
Sbjct: 442 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 501

Query: 566 QRASE 570
           +R  E
Sbjct: 502 RRMQE 506



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 1/225 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++   C+    +   ++ + M   G  P        + +  +A + D A  L  + 
Sbjct: 375 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 434

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    + S  +Y  ++  L K    D+A+ MF E  +L   PD + +N L+ GL+R G +
Sbjct: 435 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGML 494

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   GC PDI +YN +++GL +     R  E+L  +K +S   PDVV+Y +
Sbjct: 495 DEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK-QSTVRPDVVSYNT 553

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           V+      G  ++A+ +  EMN+ G +   +T++ +++  GKV +
Sbjct: 554 VLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 598



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S + Y ++++ L + G  D    +FD M   G  P+       +S   R G  D A   +
Sbjct: 442 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 501

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +          YN +LN L K      A+ M     +   +PD  ++N ++  LS  
Sbjct: 502 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 561

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           G  ++A +   +M + G   D++TY++++  + +V+ 
Sbjct: 562 GMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 598



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 2/144 (1%)

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL-VPKPFMYNPVIDGFCKAGN 487
           K +N   +  T+  LI+ L    +  +  + ++++  N + V  P   + V+     A  
Sbjct: 82  KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKM 141

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVN 546
           V +A  I  +++ ++C+P    +  +II    +G+  +   ++N+M   G C PD +T +
Sbjct: 142 VRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYS 201

Query: 547 SLISCLLKGGMPNEAFRIMQRASE 570
           +LIS   K G  + A +++    E
Sbjct: 202 ALISAFCKLGRRDSAIQLLNEMKE 225


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 203/407 (49%), Gaps = 11/407 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD-AAKGL 213
           +  T+   + +LC+MG  +    +F  M+  G  PN     +  +S I   +    A GL
Sbjct: 332 TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNV----YTYTSLISGQRVSRMAIGL 387

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +     V  +T  YN+L+N L++    D A+ +F    +    P+T ++N LI+G   
Sbjct: 388 FHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCT 447

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           IG+ +KA     +M     +P +VTYN +I G C   +      +L+ +K      PD  
Sbjct: 448 IGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG-CQPDEW 506

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +YT +ISG+CK+ KM+ A+G++NEM   G+ P+ VT+  LI G+ K   +  A  M ERM
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P+V T++ LI G  +    +   +LC  M  + +SP+V T++ +IN LC    +
Sbjct: 567 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAI 626

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A     ++  +  +P    Y+ +I    + G V+EA  + +E++++   PD+VT+  +
Sbjct: 627 PLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKM 686

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           I    M G++  A     +M+  GC P   T + LI      G+ NE
Sbjct: 687 IEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIK-----GLQNE 728



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 190/405 (46%), Gaps = 4/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC  G  +        M   G LP        + +    G+ + A  +    
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDM 359

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      + + Y SL++    Q  +  A+ +F    R    P+T T+N L+  L    E+
Sbjct: 360 KKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  MG  GC P+  +YN LI G C + +  +   +L  +  K   +P +VTY  
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM-LKGRPTPTLVTYNI 475

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I GYC  G  D A  +   M + G +P   ++  LI GF K+  M  A  M   M+  G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ VT+++LI GYC++ +L+   ++ + MK     PNV T+ +LI+ L K+N  + A 
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 595

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K +    + P    Y+ VI+G C  G +  A  +  +M +  C P+  T++ LI   
Sbjct: 596 ELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             +GR+ EA  +F+++ + G  PD++T   +I   +  G  + AF
Sbjct: 656 GQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 204/435 (46%), Gaps = 33/435 (7%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN V+ +LC+ G     + + + +   G  P++      +    R    D+A  + ++  
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   Y++L+N L      +EA+    E  R    P   TF   I  L  +G ++
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIE 350

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG---------------------HE 317
            A++ F DM   GC P++ TY +LISG  RV+ +A G                     + 
Sbjct: 351 DAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRMAIGLFHRMSRDGVVPNTVTYNALMNV 409

Query: 318 LLKEVKFKSEFS-----------PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           L++ ++  S              P+  +Y  +I GYC +G  +KA  +   M      P+
Sbjct: 410 LMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPT 469

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT+N++I G+   G+   A  + E M + G  PD  +++ LI G+C+  ++     + +
Sbjct: 470 LVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFN 529

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM  + L PN  T+T LI+  CK+ +L+ A R L+++K +   P    YN +I G  K  
Sbjct: 530 EMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQN 589

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           N   A  +   M E++  PD VT++ +I G C  G +  A+ +FNKM++ GC P+  T +
Sbjct: 590 NFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYS 649

Query: 547 SLISCLLKGGMPNEA 561
           SLI  L + G   EA
Sbjct: 650 SLIQALGQEGRVEEA 664



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 174/341 (51%), Gaps = 4/341 (1%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
            +YNS++NAL K  N  +A  +  + F+   +PDT+T+  +I G  R  ++  AFE F  
Sbjct: 229 LIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNR 288

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   GC P+  TY+TLI+GLC    V    + + E+  +    P V T+T+ I   C +G
Sbjct: 289 MDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMT-RHGVLPTVHTFTAPIVALCDMG 347

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           +++ A  I+ +M   G KP+  T+  LI G  +V  M    +   RM   G +P+ VT++
Sbjct: 348 RIEDAWKIFIDMKKKGCKPNVYTYTSLISG-QRVSRMAIGLF--HRMSRDGVVPNTVTYN 404

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +L++    N +++  L + + M      PN  ++  LI   C       A   L  +   
Sbjct: 405 ALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKG 464

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    YN +I G+C +G+ D A  ++  M+   C+PD+ ++T LI G C   +M  A
Sbjct: 465 RPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELA 524

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             +FN+M+  G  P+++T  +LIS   K    + A R+++R
Sbjct: 525 SGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLER 565



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 192/451 (42%), Gaps = 25/451 (5%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           L   L+P  +  V  R   P   L+FL F    LS  HS K Y     +   M L +S  
Sbjct: 98  LLASLTPEKAAFVAARCLVPVRALEFLLF----LSREHSHK-YGPDTFAKVAMRLLESRD 152

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
                 R+  H+         + SC    +   A   L  F      M  F Y +LL  L
Sbjct: 153 RPAAVGRARIHM---------IKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQL 203

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K N     +  + +  R   QP+   +N +I  L + G V+ A      +   G  PD 
Sbjct: 204 NKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDT 263

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            TY ++I G CR  ++    E+   +  +    P+  TY+++I+G C  G++++A    +
Sbjct: 264 FTYTSMILGYCRNRDLDSAFEIFNRMD-EEGCEPNAATYSTLINGLCNSGRVNEALDFIS 322

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EM   G+ P+  TF   I     +G +  A  +   M   G  P+V T++SLI G  R  
Sbjct: 323 EMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVS 381

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++  G  L   M    + PN  T+  L+N L +   ++ A      +  +  +P    YN
Sbjct: 382 RMAIG--LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYN 439

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I G+C  G+ ++A  ++  M + R  P  VT+ I+I G+C  G    AI +   M   
Sbjct: 440 ELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKAN 499

Query: 537 GCAPDDITVNSLISCL-------LKGGMPNE 560
           GC PD+ +   LIS         L  GM NE
Sbjct: 500 GCQPDEWSYTELISGFCKISKMELASGMFNE 530



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 190/491 (38%), Gaps = 93/491 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M  L E    DS  +VF+ M   G LPN+      +      G  + A  +L+  
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G  T +   YN ++       + D A+ + +       QPD W++  LI G  +I ++
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521

Query: 278 KKAFEFFYDM-----------------------------------GSFGCSPDIVTYNTL 302
           + A   F +M                                      GC P++ TYN L
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I GL + N  +   EL K V  + + SPDVVTY++VI+G C  G +  A  ++N+M   G
Sbjct: 582 IHGLTKQNNFSGAEELCK-VMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P+  T++ LI   G+ G +  AE M   +   G +PD VT+  +I+    +G++++  
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKE-------------------------------- 450
               EM      P + T+ +LI  L  E                                
Sbjct: 701 DFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS 760

Query: 451 -----------NRLNDA--RRFLKQLKW---NDL---------VPKPFMYNPVIDGFCKA 485
                       +L DA   R  +  +W   N+L          P    Y   +    +A
Sbjct: 761 SKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRA 820

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
             VD A  +   M ++RC+     +  LI   C   R  EA  +F KML      D+I  
Sbjct: 821 LKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVW 880

Query: 546 NSLISCLLKGG 556
             LI+ LL  G
Sbjct: 881 TILINGLLGAG 891



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 97/448 (21%), Positives = 165/448 (36%), Gaps = 93/448 (20%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++++  C+ G  D    V + M+++G  P+       +S   +  K + A G+ ++ 
Sbjct: 472 TYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEM 531

Query: 218 R-----PGEVTMSTFM------------------------------YNSLLNALVKQNNA 242
                 P EVT +  +                              YN L++ L KQNN 
Sbjct: 532 MDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNF 591

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
             A  + K        PD  T++ +I GL   G +  A E F  M   GC P++ TY++L
Sbjct: 592 SGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSL 651

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA----------- 351
           I  L +   V    E+  E+K K    PD VTY  +I      GK+D+A           
Sbjct: 652 IQALGQEGRVEEAEEMFSELK-KQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAG 710

Query: 352 ------------TGIYNEM--NSCGIKPSAVT---------------------------- 369
                        G+ NEM  +     P+A +                            
Sbjct: 711 CQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFEL 770

Query: 370 ----FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
               ++ L+    + G    A  +   M+S    P+  T+   +    R  +++  + + 
Sbjct: 771 SRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVF 830

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
             M  +    ++  +  LI  LC+ +R  +AR   +++    L     ++  +I+G   A
Sbjct: 831 KHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGA 890

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           G  D     +  ME  R  P     TIL
Sbjct: 891 GYKDLCMEFLHIMETNRRNPSSHARTIL 918



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 73/134 (54%)

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + L PN+  +  +INALCK+  + DA   + ++  + + P  F Y  +I G+C+  ++D 
Sbjct: 222 EGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDS 281

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  I   M+E+ C+P+  T++ LI G C  GR+ EA+   ++M R G  P   T  + I 
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIV 341

Query: 551 CLLKGGMPNEAFRI 564
            L   G   +A++I
Sbjct: 342 ALCDMGRIEDAWKI 355



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 1/151 (0%)

Query: 413 CRN-GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           C N  ++ Q L   D    +     ++T+T L+  L K N  +       Q+    L P 
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
             +YN VI+  CK GNV +A  I+ ++ +   KPD  T+T +I+G+C    +  A  IFN
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           +M   GC P+  T ++LI+ L   G  NEA 
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEAL 318



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/315 (20%), Positives = 121/315 (38%), Gaps = 23/315 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC  G       +F+ M   G LPN       + +  + G+ + A+ + S+ 
Sbjct: 612 TYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL 671

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +      Y  ++   V     D A     E      QP   T+++LI+GL      
Sbjct: 672 KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVY 731

Query: 278 KK--AFEFFYDMGSFG---CSPDIVT-----------------YNTLISGLCRVNEVARG 315
            K  A        +F     + D+++                 Y+ L+S L R       
Sbjct: 732 HKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEA 791

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           + L + +  +S+  P+  TY   +    +  K+D A  ++  M+    +     +  LI 
Sbjct: 792 NNLYRSMVSQSQ-CPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELIC 850

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
              ++     A ++ E+MLS     D + ++ LI+G    G  +  ++    M+    +P
Sbjct: 851 TLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNP 910

Query: 436 NVYTFTILINALCKE 450
           + +  TIL     KE
Sbjct: 911 SSHARTILAREALKE 925



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 52/138 (37%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L    S + Y+ ++  L   G       ++  M S    PN    + F+ S +RA K D 
Sbjct: 766 LDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDL 825

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +          +    Y  L+  L + +   EA ++F++        D   + ILI 
Sbjct: 826 AMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILIN 885

Query: 270 GLSRIGEVKKAFEFFYDM 287
           GL   G      EF + M
Sbjct: 886 GLLGAGYKDLCMEFLHIM 903


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 200/408 (49%), Gaps = 2/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++ SLC  G     + +   M+S  H+ NS      +   ++ G+  AA  +L   
Sbjct: 228 TCNILLNSLCTNGEFRKAEDMLQKMKS-CHISNSVTYNTILHWYVKKGRFKAALCVLEDM 286

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    + YN +++ L +   +  A  + K   +    PD  T+N LI G  R G++
Sbjct: 287 ERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKI 346

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  M      P + TY T+I G CR   + +   +L E++  +   P  +TY++
Sbjct: 347 NHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQI-TGVMPSELTYSA 405

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYCK+  +  A  +  ++ S GI  +     +LIDGF +VG +  A+ + + M   G
Sbjct: 406 LLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDG 465

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV+T+S+LI+G CR  ++++  ++   M+   + PN   +T LI   CK   + +A 
Sbjct: 466 IDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEAL 525

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    LV  P ++N ++  F + G + EA      M       D V+F  +I  +
Sbjct: 526 KHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSY 585

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +G +V A S+++ M+R G +P+  T  +L+  L +GG   +A + M
Sbjct: 586 CHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFM 633



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 181/375 (48%), Gaps = 4/375 (1%)

Query: 190 NSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           N  + E  V + ++  K  DAA  +L     G    S    N++LNALV++  +      
Sbjct: 155 NHVVFELLVKAYVKERKVLDAAVAVLFMDDCG-FKASPVSCNTILNALVEEGESKHVWLF 213

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            +E           T NIL+  L   GE +KA +    M S   S + VTYNT++    +
Sbjct: 214 LRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVK 272

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
                    +L++++ +     DV TY  +I   C++ +  +A  +   M    + P   
Sbjct: 273 KGRFKAALCVLEDME-RDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDEC 331

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+N LI+GF + G +  A Y+   ML    +P V T++++IDGYCRN ++++ L +  EM
Sbjct: 332 TYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEM 391

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           +   + P+  T++ L+N  CK + L  A   ++ LK   +     M   +IDGFC+ G +
Sbjct: 392 QITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEI 451

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            +A  I+  M E    PD +T++ LI G C   +M E   I ++M + G  P+D+   +L
Sbjct: 452 SKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 511

Query: 549 ISCLLKGGMPNEAFR 563
           I    K G   EA +
Sbjct: 512 ICYYCKAGYVKEALK 526



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 171/340 (50%), Gaps = 2/340 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N LLN+L       +A  M ++  +     ++ T+N ++    + G  K A     DM  
Sbjct: 230 NILLNSLCTNGEFRKAEDMLQK-MKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMER 288

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
                D+ TYN +I  LCR+    R   LLK ++ K + +PD  TY ++I+G+ + GK++
Sbjct: 289 DSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMR-KDDLTPDECTYNTLINGFFREGKIN 347

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  ++N M    + PS  T+  +IDG+ +   +  A  +   M   G +P  +T+S+L+
Sbjct: 348 HARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALL 407

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +GYC+   L   + L +++K + ++ N    TILI+  C+   ++ A++ LK +  + + 
Sbjct: 408 NGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGID 467

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y+ +I+G C+   + E   I++ M++    P+ V +T LI  +C  G + EA+  
Sbjct: 468 PDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKH 527

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           F  + R G   + +  N+L+    + GM  EA    Q  S
Sbjct: 528 FVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMS 567



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 201/427 (47%), Gaps = 5/427 (1%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
            SR+N+S +    ++N ++ S C  G       V+D M   G+ PN    +  +    + 
Sbjct: 566 MSRMNISFDSV--SFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQG 623

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G    A+  +S        +    +N+LL  + +    DEA+ + ++  +    PD  T+
Sbjct: 624 GHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTY 683

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            IL+ G  R G++  A      M   G  PD V Y  L++GL    +V     +  E+  
Sbjct: 684 TILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIIC 743

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K     D + Y S+++GY K   ++    + ++M    + P++ ++N+L+ G+ K G   
Sbjct: 744 KEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFS 803

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            + Y+ + M+  G  PD VT+  LI G    G ++  +K  ++M  + + P+   F ILI
Sbjct: 804 KSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILI 863

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
            A  +++++++A +    +KW  + P    ++ +I+G  + G +D ++ ++ EM +   +
Sbjct: 864 TAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQ 923

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA--- 561
           P+   +  L+   C  G +  A  +  +M  IG  P ++  +S+I  L + G   EA   
Sbjct: 924 PNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIV 983

Query: 562 FRIMQRA 568
           F  M R+
Sbjct: 984 FSSMMRS 990



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 198/425 (46%), Gaps = 4/425 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY +++   C  G      V+   M   G +P++      ++  I  G+  AA  +  + 
Sbjct: 682  TYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEI 741

Query: 218  RPGE-VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               E +      YNSL+N  +K  N +    M  + ++    P++ ++NIL+ G  + G+
Sbjct: 742  ICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQ 801

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              K+   +  M   G  PD VTY  LI GL     +    + L+++  +  F PD + + 
Sbjct: 802  FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIF-PDRLVFD 860

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
             +I+ + +  KM  A  ++N M    + PS+ TF+ +I+G  + G +  +  +   ML  
Sbjct: 861  ILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQV 920

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            G  P+   + +L++  CR G++++  +L +EMK   + P     + +I  LC+  +L +A
Sbjct: 921  GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 980

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                  +  + +VP    +  ++   CK   + +A  +   ME  R + D V++ +LI G
Sbjct: 981  VIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITG 1040

Query: 517  HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
             C    + +A+ ++ +M   G  P+  T  +L   +   G       +++   E++ L +
Sbjct: 1041 LCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDI-EERGL-I 1098

Query: 577  PSWKK 581
            P++K+
Sbjct: 1099 PAYKQ 1103



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/446 (21%), Positives = 199/446 (44%), Gaps = 37/446 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++   C++ +      + + ++S G   N  M    +    + G+   AK +L   
Sbjct: 402 TYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSM 461

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y++L+N + +     E   +     +    P+   +  LI    + G V
Sbjct: 462 FEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYV 521

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A + F D+   G   + V +N L+    R   +    E  ++   +   S D V++  
Sbjct: 522 KEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEA-EHFRQYMSRMNISFDSVSFNR 580

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YC  G +  A  +Y++M   G  P+  T+  L+ G  + G++V A      +L   
Sbjct: 581 IIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIP 640

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +  D  TF++L+ G CR G L++ L LC++M   N  P+++T+TIL++  C++ ++  A 
Sbjct: 641 FAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPAL 700

Query: 458 RFLKQLKWNDLVPKP------------------------------------FMYNPVIDG 481
             L+ +    +VP                                        YN +++G
Sbjct: 701 VILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNG 760

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           + K+ NV+    ++++M +    P+  ++ IL+ G+  +G+  +++ ++  M+R G  PD
Sbjct: 761 YLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPD 820

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQR 567
           ++T   LI  L + G+ + A + +++
Sbjct: 821 NVTYRLLILGLSECGLIDIAVKFLEK 846



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 179/409 (43%), Gaps = 6/409 (1%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            KT+N ++  +C  G  D    + + M  +  LP+       +S   R GK   A  +L  
Sbjct: 646  KTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQM 705

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF---RLYSQPDTWTFNILIQGLSR 273
                 V   T  Y  LLN L+ +     A Y+F E      LY+  D   +N L+ G  +
Sbjct: 706  MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYA--DCIAYNSLMNGYLK 763

Query: 274  IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
               V        DM      P+  +YN L+ G  +  + ++   L K +  K    PD V
Sbjct: 764  SRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG-IRPDNV 822

Query: 334  TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            TY  +I G  + G +D A     +M   GI P  + F++LI  F +   M +A  +   M
Sbjct: 823  TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCM 882

Query: 394  LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                  P   TFS++I+G  R G L+   K+  EM    L PN   +  L+NA C+   +
Sbjct: 883  KWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEI 942

Query: 454  NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            + A R  +++K   +VP     + +I G C+ G ++EA ++ + M      P   TFT L
Sbjct: 943  DRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTL 1002

Query: 514  IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            +   C + ++ +A+ +   M       D ++ N LI+ L K    ++A 
Sbjct: 1003 MHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDAL 1051



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 199/451 (44%), Gaps = 37/451 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++      G  +  + VF++M     +P+       +    R  + D A  +LS+ 
Sbjct: 332 TYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEM 391

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYM----------------------------- 248
           +   V  S   Y++LLN   K +    A+Y+                             
Sbjct: 392 QITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEI 451

Query: 249 ------FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                  K  F     PD  T++ LI G+ R+ ++ +  E    M   G  P+ V Y TL
Sbjct: 452 SKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 511

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I   C+   V    +   ++ ++     + V + +++  + + G + +A      M+   
Sbjct: 512 ICYYCKAGYVKEALKHFVDI-YRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMN 570

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I   +V+FN +ID +   GN+V A  + + M+ +GY P+V T+ +L+ G C+ G L Q  
Sbjct: 571 ISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQAR 630

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +    +     + +  TF  L+  +C+   L++A    +++  N+ +P    Y  ++ GF
Sbjct: 631 QFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGF 690

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML-RIGCAPD 541
           C+ G +  A VI+  M EK   PD V +T L+ G   +G++  A  +F++++ + G   D
Sbjct: 691 CRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYAD 750

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            I  NSL++  LK    N   R+M    +++
Sbjct: 751 CIAYNSLMNGYLKSRNVNTIKRMMSDMYQNE 781



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 139/320 (43%), Gaps = 39/320 (12%)

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
            F D   F  SP  V+ NT+++ L    E       L+E     +F   V T   +++  
Sbjct: 180 LFMDDCGFKASP--VSCNTILNALVEEGESKHVWLFLRE-SLARKFPLGVTTCNILLNSL 236

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C  G+  KA  +  +M SC I  S VT+N ++  + K G   +A  + E M       DV
Sbjct: 237 CTNGEFRKAEDMLQKMKSCHISNS-VTYNTILHWYVKKGRFKAALCVLEDMERDSVQADV 295

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
            T++ +ID  CR  +  +   L   M+  +L+P+  T+  LIN   +E ++N AR     
Sbjct: 296 YTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNH 355

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF------------ 510
           +   +LVP    Y  +IDG+C+   +D+A  I++EM+     P ++T+            
Sbjct: 356 MLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSM 415

Query: 511 -----------------------TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
                                  TILI G C  G + +A  I   M   G  PD IT ++
Sbjct: 416 LGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSA 475

Query: 548 LISCLLKGGMPNEAFRIMQR 567
           LI+ + +    +E   I+ R
Sbjct: 476 LINGMCRMAKMHETKEILSR 495



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 1/217 (0%)

Query: 150  LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
            L ++ S KT++ ++  L   G  D    V   M   G  PN       V++  R G+ D 
Sbjct: 885  LHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDR 944

Query: 210  AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            A  L  + +   +  +    +S++  L +    +EAV +F    R    P   TF  L+ 
Sbjct: 945  AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMH 1004

Query: 270  GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
             L +  ++  A      M       D+V+YN LI+GLC+   ++   +L  E+K K  + 
Sbjct: 1005 SLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLW- 1063

Query: 330  PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
            P++ TY ++       G++     +  ++   G+ P+
Sbjct: 1064 PNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPA 1100


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 220/473 (46%), Gaps = 65/473 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+ +++R  C+ GL D    + + M S G LPN  +    VSS  R G+ D ++ L+ + 
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKM 243

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK-----EYFRLYSQPDTWTFNILIQGLS 272
           R   +      +NS ++AL K+    +A  +F      EY  L  +P++ T+N++++G  
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL-PRPNSITYNLMLKGFC 302

Query: 273 RIGEVKKAFEFFYDM----------------------GSF-------------GCSPDIV 297
           ++G ++ A   F  +                      G F             G  P I 
Sbjct: 303 KVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIY 362

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           +YN L+ GLC++  ++    ++  +K ++  SPD VTY  ++ GYC +GK+D A  +  E
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMK-RNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M      P+A T N+L+     +G +  AE +  +M   GY  D VT + ++DG C +G+
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481

Query: 418 LNQGLKLC-----------------------DEMKGKNLSPNVYTFTILINALCKENRLN 454
           L++ +++                        D +   N  P++ T++ L+N LCK  R  
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A+    ++    L P    YN  I  FCK G +  A  ++ +ME+K C     T+  LI
Sbjct: 542 EAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +G  +K ++ E   + ++M   G +P+  T N+ I  L +GG   +A  ++  
Sbjct: 602 LGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDE 654



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 202/396 (51%), Gaps = 11/396 (2%)

Query: 179 FDYMRSDGHLP-NSPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
           F ++RS    P N P I  +   + SCIR  + +    L        ++  T+ +N L+ 
Sbjct: 98  FQFVRS--RFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIR 155

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           AL   +  D A  +F E      +P+ +TF IL++G  + G   K  E    M SFG  P
Sbjct: 156 ALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLP 215

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + V YNT++S  CR        +L+++++ +    PD+VT+ S IS  CK GK+  A+ I
Sbjct: 216 NKVVYNTIVSSFCREGRNDDSEKLVEKMR-EEGLVPDIVTFNSRISALCKEGKVLDASRI 274

Query: 355 YNEMN---SCGI-KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           +++M      G+ +P+++T+N+++ GF KVG +  A+ + E +     L  + +++  + 
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQ 334

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G  R+G+  +   +  +M  K + P++Y++ IL++ LCK   L+DA+  +  +K N + P
Sbjct: 335 GLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSP 394

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  ++ G+C  G VD A  ++ EM    C P+  T  IL+      GR+ EA  + 
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELL 454

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            KM   G   D +T N ++  L   G  ++A  I++
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 203/436 (46%), Gaps = 28/436 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+NL++R+LC+    D+ + +FD M   G  PN       V    +AG  D    LL+  
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSM 208

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +  +YN+++++  ++   D++  + ++       PD  TFN  I  L + G+V
Sbjct: 209 ESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKV 268

Query: 278 KKAFEFFYDM---GSFGC-SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             A   F DM      G   P+ +TYN ++ G C+V  +     L + ++   +    + 
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVS-LQ 327

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +Y   + G  + GK  +A  +  +M   GI PS  ++N+L+DG  K+G +  A+ +   M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  PD VT+  L+ GYC  G+++    L  EM   N  PN YT  IL+++L    R+
Sbjct: 388 KRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRI 447

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME-------------- 499
           ++A   L+++            N ++DG C +G +D+A  IV  M               
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507

Query: 500 ---------EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
                    E  C PD +T++ L+ G C  GR  EA ++F +M+     PD +  N  I 
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIH 567

Query: 551 CLLKGGMPNEAFRIMQ 566
              K G  + AFR+++
Sbjct: 568 HFCKQGKISSAFRVLK 583



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 178/348 (51%), Gaps = 5/348 (1%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           ++YN LL + +++   +   +++K+       P+T+TFN+LI+ L     V  A E F +
Sbjct: 113 YLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDE 172

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   GC P+  T+  L+ G C+     +G ELL  ++      P+ V Y +++S +C+ G
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVL-PNKVVYNTIVSSFCREG 231

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL----PDV 402
           + D +  +  +M   G+ P  VTFN  I    K G ++ A  +   M    YL    P+ 
Sbjct: 232 RNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           +T++ ++ G+C+ G L     L + ++  +   ++ ++ I +  L +  +  +A   LKQ
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQ 351

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    + P  + YN ++DG CK G + +A  IV  M+     PD VT+  L+ G+C  G+
Sbjct: 352 MIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGK 411

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  A S+  +M+R  C P+  T N L+  L   G  +EA  ++++ +E
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNE 459



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 196/446 (43%), Gaps = 25/446 (5%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           ++  +  S  +YN++M  LC++G+    + +   M+ +G  P++      +      GK 
Sbjct: 353 IDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKV 412

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           DAAK LL +        + +  N LL++L       EA  + ++        DT T NI+
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 268 IQGLSRIGEVKKAFEFFYDM--------GSFG---------------CSPDIVTYNTLIS 304
           + GL   GE+ KA E    M        G+ G               C PD++TY+TL++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           GLC+    A    L  E+    +  PD + Y   I  +CK GK+  A  +  +M   G  
Sbjct: 533 GLCKAGRFAEAKTLFAEM-MGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH 591

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
            S  T+N LI G G    +     + + M   G  P++ T+++ I   C  G++     L
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNL 651

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEM  KN++PNV++F  LI A CK    + A+    +   +    K  +Y+ + +    
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLA 710

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           AG + +A  ++  + ++  +     +  L++  C K  +  A  I +KM+  G   D   
Sbjct: 711 AGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAA 770

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASE 570
           +  +I  L K G   EA    ++  E
Sbjct: 771 LMPVIDGLGKMGNKKEANNFAEKMME 796



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 192/437 (43%), Gaps = 58/437 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL+++  C++GL +  + +F+ +R +  L +      ++   +R GK   A+ +L Q 
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 218 RPGEVTMSTFMYNSLLNALVKQN-----------------------------------NA 242
               +  S + YN L++ L K                                       
Sbjct: 353 IDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKV 412

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D A  + +E  R    P+ +T NIL+  L  +G + +A E    M   G   D VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFS----------------------PDVVTYTSVIS 340
           + GLC   E+ +  E++K ++     +                      PD++TY+++++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G CK G+  +A  ++ EM    ++P ++ +N+ I  F K G + SA  + + M   G   
Sbjct: 533 GLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
            + T++SLI G     Q+ +   L DEM+ K +SPN+ T+   I  LC+  ++ DA   L
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLL 652

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            ++   ++ P  F +  +I  FCK  + D A  +  E     C   +  ++++       
Sbjct: 653 DEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAA 711

Query: 521 GRMVEAISIFNKMLRIG 537
           G++++A  +   +L  G
Sbjct: 712 GQLLKATELLEAVLDRG 728



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 86/178 (48%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P +  ++ L++   R  ++     L  +M    +SP  YTF +LI ALC  + ++ AR  
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++      P  F +  ++ G+CKAG  D+   ++  ME     P+KV +  ++   C 
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           +GR  ++  +  KM   G  PD +T NS IS L K G   +A RI      D+ L LP
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 106/279 (37%), Gaps = 33/279 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC+ G     + +F  M  +   P+S     F+    + GK  +A  +L   
Sbjct: 526 TYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDM 585

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S   YNSL+  L  +N   E   +  E       P+  T+N  IQ L   G+V
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKV 645

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV---------------------------- 309
           + A     +M     +P++ ++  LI   C+V                            
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMF 705

Query: 310 NEVARGHELLK-----EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           NE+    +LLK     E      F      Y  ++   CK  +++ A+GI ++M   G  
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYG 765

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
                   +IDG GK+GN   A    E+M+    + +V 
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVA 804


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 204/418 (48%), Gaps = 8/418 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS--CIRAGKCDAAKG 212
           SF++YN+V+  L     H     ++  M     +P +    F V++    R G+ D A  
Sbjct: 138 SFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPT-TFTFGVAARALCRLGRADEALA 196

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           LL             +Y ++++AL  Q    EA  +  E   +    D  TF+ +++G+ 
Sbjct: 197 LLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMC 256

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            +G V++A      M + GC P ++TY  L+ GLCRV +      +L  V        +V
Sbjct: 257 GLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP-----ELNV 311

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           V + +VI G    GK+ +AT +Y  M   G +P A T+++L+ G  K+G + SA  +   
Sbjct: 312 VLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLRE 371

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G+ P+VVT++ ++  +C+NG  +    L +EM  K L+ N   +  +I ALCK+ R
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 431

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A   +++++     P    YN +I   C    ++EA  +   + E+    + +T+  
Sbjct: 432 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 491

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +I      GR  +A+ +  +M+  GC+ D ++ N LI  + K G  + +  +++  +E
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 194/427 (45%), Gaps = 40/427 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ V+R +C +G       + D M + G +P      F +    R  + D A+ +L + 
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++  ++N+++   + +    EA  +++       QPD  T++IL+ GL ++G +
Sbjct: 307 ----PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M   G +P++VTY  ++   C+         LL+E+  K   + +   Y  
Sbjct: 363 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG-LTLNSQGYNG 421

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G+MD+A G+  EM S G  P   ++N +I        M  AE+M E +L  G
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 398 YLP-----------------------------------DVVTFSSLIDGYCRNGQLNQGL 422
            +                                    DVV+++ LI   C++G +++ L
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L +EM  K + PN  ++ ILI+ LCKE R+ DA    KQ+    L P    YN +I+G 
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G +  A  ++ ++  +   PD +T+ ILI  HC    + +A  + N+ +   C   D
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGD 661

Query: 543 ITVNSLI 549
             +  ++
Sbjct: 662 RRIMQIL 668



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 1/205 (0%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N    +YN ++  LC     +  + +F+ +  +G + N       + + +R G+   A  
Sbjct: 448 NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVR 507

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L  +      ++    YN L+ A+ K  N D ++ + +E      +P+  ++NILI  L 
Sbjct: 508 LAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELC 567

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   V+ A E    M + G +PDIVTYNTLI+GLC++  +     LL+++       PD+
Sbjct: 568 KERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL-HNENVHPDI 626

Query: 333 VTYTSVISGYCKLGKMDKATGIYNE 357
           +TY  +IS +CK+  +D A  + N 
Sbjct: 627 ITYNILISWHCKVRLLDDAAMLLNR 651


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 216/435 (49%), Gaps = 31/435 (7%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ----- 216
           ++ SL ++  + +V  +F  +  +G  PN   +   ++     G+   A  + ++     
Sbjct: 77  ILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMG 136

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  +T++T +    LN  VK     EA++       L    +  ++  LI GL +IGE
Sbjct: 137 YHPNTITLTTLVKGFCLNHKVK-----EALHFHDHVLALGFHFNQVSYGTLINGLCKIGE 191

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A +    +     S D+V Y+T+I GLC+   V   +EL  E+  K   SP VVT  
Sbjct: 192 TRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITK-RISPTVVTLN 250

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I GYC +G+  +A G+  EM    I P   TFN+L+D   K G +  A+     M+  
Sbjct: 251 SLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKE 310

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQG-------------LKLCD-------EMKGKNLSPN 436
           G +PDVVT+SSL+DGYC   ++N+              +K+ D       EM+ + ++P+
Sbjct: 311 GVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPD 370

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T+  LI+ LCK  R++ A   + +++ +        YN +ID  CK  +VD+A  +V 
Sbjct: 371 TVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVK 430

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +++++  + D  T+ ILI G C +GR+ +A  IF  +L  G      T   +I+ L   G
Sbjct: 431 KIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEG 490

Query: 557 MPNEAFRIMQRASED 571
           + NEA  ++ +  ++
Sbjct: 491 LLNEAETLLSKMEDN 505



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 197/388 (50%), Gaps = 16/388 (4%)

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           D++ + G   N       ++   + G+  AA  +L Q     V+    MY+++++ L K 
Sbjct: 165 DHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKD 224

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
              ++A  ++ E       P   T N LI G   +G+ K+AF    +M     +PD+ T+
Sbjct: 225 KLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTF 284

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N L+  LC+  ++      +  V  K    PDVVTY+S++ GYC + +++KA  +Y+   
Sbjct: 285 NILVDALCKEGKIKEAKSGI-AVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYS--- 340

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
                       ++I+GF K+  +  A  +   M      PD VT++SLIDG C++G+++
Sbjct: 341 ------------IVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRIS 388

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
              +L DEM+      ++ T+  LI+ALCK + ++ A   +K++K   +    + YN +I
Sbjct: 389 YAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILI 448

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG CK G + +A VI  ++  K       T+TI+I G C++G + EA ++ +KM   GC 
Sbjct: 449 DGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCV 508

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQR 567
           PD +T  ++I  L +      A ++++ 
Sbjct: 509 PDAVTCETIIRALFENDKNERAEKLLRE 536



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 188/378 (49%), Gaps = 28/378 (7%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   +  +L++LVK  +    + +F +      +P+  + +ILI     +G+++ AF  F
Sbjct: 70  SVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIF 129

Query: 285 YDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             +   G  P+ +T  TL+ G C   +V E    H+ +  + F      + V+Y ++I+G
Sbjct: 130 AKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHF----NQVSYGTLING 185

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            CK+G+   A  +  ++    +    V ++ +IDG  K   +  A  +   M++    P 
Sbjct: 186 LCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPT 245

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VVT +SLI GYC  GQ  +   L  EM  KN++P+VYTF IL++ALCKE ++ +A+  + 
Sbjct: 246 VVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIA 305

Query: 462 QLKWNDLVP--------------------KPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            +    ++P                       +Y+ VI+GFCK   VD+A  +  EM  +
Sbjct: 306 VMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCR 365

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           R  PD VT+  LI G C  GR+  A  + ++M   G   D IT NSLI  L K    ++A
Sbjct: 366 RIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKA 425

Query: 562 FRIMQRASEDQNLQLPSW 579
             ++++  +DQ +QL  +
Sbjct: 426 IALVKKI-KDQGIQLDMY 442



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 140/266 (52%), Gaps = 1/266 (0%)

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
           F+ M     +P ++ +  ++S L ++        L  +++F     P++V+ + +I+ YC
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNG-IKPNIVSLSILINCYC 117

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
            LG+M  A  I+ ++   G  P+ +T   L+ GF     +  A +  + +L+ G+  + V
Sbjct: 118 HLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQV 177

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           ++ +LI+G C+ G+    L++  +++GK +S +V  ++ +I+ LCK+  +NDA     ++
Sbjct: 178 SYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEM 237

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P     N +I G+C  G   EA  ++ EM  K   PD  TF IL+   C +G++
Sbjct: 238 ITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKI 297

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLI 549
            EA S    M++ G  PD +T +SL+
Sbjct: 298 KEAKSGIAVMMKEGVMPDVVTYSSLM 323



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 119/233 (51%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P V+ +  ++S   KL        ++ ++   GIKP+ V+ ++LI+ +  +G M  A  
Sbjct: 68  APSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFS 127

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  ++L  GY P+ +T ++L+ G+C N ++ + L   D +       N  ++  LIN LC
Sbjct: 128 IFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLC 187

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K      A + L+Q++   +     MY+ +IDG CK   V++A  + +EM  KR  P  V
Sbjct: 188 KIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVV 247

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           T   LI G+C+ G+  EA  +  +M+     PD  T N L+  L K G   EA
Sbjct: 248 TLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEA 300



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 16/283 (5%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+N+++ +LC+ G     +     M  +G +P     +    S +  G C   
Sbjct: 276 NINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMP-----DVVTYSSLMDGYC--- 327

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
                     EV  +  +Y+ ++N   K    D+A+ +F E       PDT T+N LI G
Sbjct: 328 -------LVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDG 380

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G +  A+E   +M   G   DI+TYN+LI  LC+ + V +   L+K++K +     
Sbjct: 381 LCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQG-IQL 439

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+ TY  +I G CK G++  A  I+ ++   G   +  T+ ++I+G    G +  AE + 
Sbjct: 440 DMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLL 499

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +M   G +PD VT  ++I     N +  +  KL  EM  + L
Sbjct: 500 SKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 69/136 (50%)

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
           N +P+V  F  ++++L K            QL++N + P     + +I+ +C  G +  A
Sbjct: 66  NPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFA 125

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             I A++ +    P+ +T T L+ G C+  ++ EA+   + +L +G   + ++  +LI+ 
Sbjct: 126 FSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLING 185

Query: 552 LLKGGMPNEAFRIMQR 567
           L K G    A +++++
Sbjct: 186 LCKIGETRAALQMLRQ 201


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 3/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++NLV++++C++GL D    VF  M      P+       +    +  + D A  LL + 
Sbjct: 190 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 249

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      S+  +N L+N L K+ +      +    F     P+  T+N +I GL   G++
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      M +  C P+ VTY TLI+GL +      G  LL  ++ +   + +   Y++
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE-YAYST 368

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG  K  K ++A G++ +M   G +P+ V ++ LIDG  + G +  A+ +   M++ G
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+  T+SSLI G+ + G   + +++  EM   N  PN   +++LI+ LC++ +L +A 
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 488

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPDKVTFTILII 515
                +    L P    Y+ +I G C AG+V+    +  EM  +E   +PD VT+ IL+ 
Sbjct: 489 MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLR 548

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             C +  +  AI + N ML  GC PD IT N  ++ L
Sbjct: 549 ALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 178/335 (53%), Gaps = 1/335 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           ++ +   +N ++ A+ K    D A+ +F+E      +PD +T+  L+ GL +   + +A 
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M   GC P  VT+N LI+GLC+  ++ R  +L+  +  K    P+ VTY ++I+G
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG-CVPNEVTYNTIING 302

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C  GK+DKA  + + M +    P+ VT+  LI+G  K G  V   ++   +   G+  +
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 362

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
              +S+LI G  +  +  + + L  +M  K   PN+  ++ LI+ LC+E +L++A+  L 
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 422

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++      P  F Y+ +I GF K GN  +A  +  EM +  C P+++ +++LI G C  G
Sbjct: 423 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 482

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++ EA+ ++  ML  G  PD +  +S+I  L   G
Sbjct: 483 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 517



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 181/335 (54%), Gaps = 3/335 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYF--RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           +NS+LN ++++     A+  ++     +    P+  +FN++I+ + ++G V +A E F +
Sbjct: 154 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 213

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M    C PD+ TY TL+ GLC+ + +     LL E++ +  F P  VT+  +I+G CK G
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF-PSSVTFNVLINGLCKKG 272

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            M + T + + M   G  P+ VT+N +I+G    G +  A  + +RM++   +P+ VT+ 
Sbjct: 273 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 332

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +LI+G  + G+   G+ L   ++ +    N Y ++ LI+ L KE +  +A    K++   
Sbjct: 333 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 392

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P   +Y+ +IDG C+ G +DEA  I+ EM  K C P+  T++ LI G    G   +A
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           I ++ +M +  C P++I  + LI  L + G   EA
Sbjct: 453 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 487



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 173/312 (55%), Gaps = 5/312 (1%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFG---CSPDIVTYNTLISGLCRVNEVARGHELL 319
           +FN ++  + + G   +A EF Y+ G  G    SP+++++N +I  +C++  V R  E+ 
Sbjct: 153 SFNSVLNVIIQEGLFHRALEF-YECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVF 211

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  + +  PDV TY +++ G CK  ++D+A  + +EM   G  PS+VTFNVLI+G  K
Sbjct: 212 REMAIQ-KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 270

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G+MV    + + M   G +P+ VT++++I+G C  G+L++ + L D M      PN  T
Sbjct: 271 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 330

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  LIN L K+ R  D    L  L+        + Y+ +I G  K    +EA  +  +M 
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           EK C+P+ V ++ LI G C +G++ EA  I  +M+  GC P+  T +SLI    K G   
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450

Query: 560 EAFRIMQRASED 571
           +A R+ +  +++
Sbjct: 451 KAIRVWKEMAKN 462



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 190/401 (47%), Gaps = 21/401 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC+ G    V  + D M   G +PN       ++     GK D A  LL + 
Sbjct: 260 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 319

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   Y +L+N LVKQ  + + V++           + + ++ LI GL +  + 
Sbjct: 320 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 379

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   +  M   GC P+IV Y+ LI GLCR  ++    E+L E+  K   +P+  TY+S
Sbjct: 380 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG-CTPNAFTYSS 438

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ K G   KA  ++ EM      P+ + ++VLI G  + G +  A  M   ML  G
Sbjct: 439 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 498

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALCKENRLND 455
             PDVV +SS+I G C  G +  GLKL +EM  +  +  P+V T+ IL+ ALCK+N ++ 
Sbjct: 499 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 558

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD--KVTFTIL 513
           A   L               N ++D  C   ++   N+ +  + EK   P   +     L
Sbjct: 559 AIDLL---------------NSMLDRGCNP-DLITCNIFLNALREKLNPPQDGREFLDEL 602

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           ++    + R+V A  I   ML+    P+  T   +I  L K
Sbjct: 603 VVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 149/354 (42%), Gaps = 57/354 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  D    + D M +   +PN       ++  ++ G+      LLS  
Sbjct: 295 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 354

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + + Y++L++ L K+  ++EA+ ++K+      QP+   ++ LI GL R G++
Sbjct: 355 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 414

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGL--------------------CRVNEVARG-- 315
            +A E   +M + GC+P+  TY++LI G                     C  NE+     
Sbjct: 415 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL 474

Query: 316 -HELLKEVKFKSE-----------FSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSC 361
            H L ++ K +               PDVV Y+S+I G C  G ++    ++NEM     
Sbjct: 475 IHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQES 534

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT----------------- 404
             +P  VT+N+L+    K  ++  A  +   ML  G  PD++T                 
Sbjct: 535 DSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQD 594

Query: 405 ----FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                  L+    +  ++    K+ + M  K L PN  T+  +I  LCK  ++ 
Sbjct: 595 GREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 191/392 (48%), Gaps = 45/392 (11%)

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAK-GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           HL  SP +   + +   A +  A      +Q +   V +     + LL++L     +  A
Sbjct: 45  HLAASPSLPHLLLTASAAARPHATSLRFYAQLKSLSVPIPVASLHPLLSSL----PSAPA 100

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             +F + +RL     T TFNI+++ L   G+  +A E    M      P+ VTYNT+I+G
Sbjct: 101 FALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAG 156

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IK 364
            C    V    E+++E++ +   +PD  TY ++ISG+CK+G+M+ A  +++EM + G + 
Sbjct: 157 FCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVA 216

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           PSAV +N LI G+   G +  A   RE M+  G    V T++ L+     +G+ +    +
Sbjct: 217 PSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAV 276

Query: 425 CDEMKGKNLSPNVYTFTILINALCKE---------------------------------- 450
            +EM+   LSP+V+T+ ILIN  CKE                                  
Sbjct: 277 LEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSR 336

Query: 451 -NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             ++ +  R  K      + P   MYN +I+  C  G+++ A  I+AEME+KR  PD VT
Sbjct: 337 KGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVT 396

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +  LI G C+ GR+ EA  + ++M + G  PD
Sbjct: 397 YNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD 428



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 163/318 (51%), Gaps = 10/318 (3%)

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEV---KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            R Y+Q  + +  I +  L  +        AF  F D+          T+N ++  LC  
Sbjct: 70  LRFYAQLKSLSVPIPVASLHPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLCAT 129

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS-CGIKPSAV 368
            +  R  ELL+++       P+ VTY +VI+G+C  G++  A  +  EM    GI P   
Sbjct: 130 GKPVRALELLRQMP-----RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKY 184

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           T+  LI G+ K+G M  A  + + ML+ G + P  V +++LI GYC  G+L+  L+  ++
Sbjct: 185 TYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYRED 244

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  + ++  V T+ +L++AL  + R +DA   L++++ N L P  F YN +I+G+CK GN
Sbjct: 245 MVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGN 304

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             +A  +  EM  K  +   VT+T LI     KG++ E   +F   ++ G  PD +  N+
Sbjct: 305 EKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364

Query: 548 LISCLLKGGMPNEAFRIM 565
           LI+    GG    AF IM
Sbjct: 365 LINSHCAGGDMERAFEIM 382



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 17/377 (4%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F +  R+ L L  +  T+N+++R LC  G       +   M     +  + +I  F   C
Sbjct: 104 FADIYRLRLPLCTT--TFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGF---C 158

Query: 202 IRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQP 259
            R G+  AA  ++ + R  G +    + Y +L++   K    ++A  +F E   +    P
Sbjct: 159 AR-GRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAP 217

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
               +N LI G    G++  A ++  DM   G +  + TYN L+  L      +  + +L
Sbjct: 218 SAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVL 277

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E++ ++  SPDV TY  +I+GYCK G   KA  ++ EM+  G++ +AVT+  LI  F +
Sbjct: 278 EEMQ-RNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSR 336

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +   + + +  +  G  PDVV +++LI+ +C  G + +  ++  EM+ K + P+  T
Sbjct: 337 KGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVT 396

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  LI   C   RL++AR  + ++    + P          G CK G  D+A  ++ EM 
Sbjct: 397 YNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMV 448

Query: 500 EKRCKPDKVTFTILIIG 516
            K   PD  T+  LI G
Sbjct: 449 GKGITPDDSTYISLIEG 465



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 157/352 (44%), Gaps = 28/352 (7%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNP------------------KLGLKFLEFSRVNLSLNHSF 156
           R+LC    P+ +LE+++++  P                  +  L+ +   R    +    
Sbjct: 124 RHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDK 183

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            TY  ++   C++G  +    VFD M + G + P++ M    +      GK D A     
Sbjct: 184 YTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYRE 243

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                 V M+   YN L++AL     A +A  + +E  R    PD +T+NILI G  + G
Sbjct: 244 DMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEG 303

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             KKA E F +M   G     VTY +LI    R  +V     L K V  K    PDVV Y
Sbjct: 304 NEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFK-VAVKKGIRPDVVMY 362

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I+ +C  G M++A  I  EM    I P  VT+N LI GF  +G +  A  + + M  
Sbjct: 363 NALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTK 422

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            G  PD+        G C+NGQ +    L  EM GK ++P+  T+  LI  L
Sbjct: 423 RGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 6/239 (2%)

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMR 390
             T+  ++   C  GK  +A  +  +M     +P+AVT+N +I GF   G + +A E MR
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCK 449
           E     G  PD  T+++LI G+C+ G++    K+ DEM  +  ++P+   +  LI   C 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             +L+ A ++ + +    +      YN ++      G   +A  ++ EM+     PD  T
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           + ILI G+C +G   +A+ +F +M R G     +T  SLI    + G   E  R+ + A
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVA 350



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            TFN+++      G  V A  +  +M      P+ VT++++I G+C  G++   L++  E
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMRE 172

Query: 428 MKGKN-LSPNVYTFTILINALCKENRLNDARR-FLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           M+ +  ++P+ YT+  LI+  CK  R+ DA + F + L   ++ P   MYN +I G+C  
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDR 232

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D A     +M ++       T+ +L+    M GR  +A ++  +M R G +PD  T 
Sbjct: 233 GKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTY 292

Query: 546 NSLISCLLKGGMPNEAFRIMQRAS 569
           N LI+   K G   +A  + +  S
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMS 316


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 187/395 (47%), Gaps = 1/395 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++ S+ +M  + +V  +   M S G  P+   +   ++S     +   A  +L++     
Sbjct: 118 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 177

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
                  +N+L+  L  +    EA+++F +      QPD  T+  L+ GL ++G    A 
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                M    C P+++ YNT+I  LC+  +V     L  E+  K   SPD+ TY S+I  
Sbjct: 238 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKG-ISPDIFTYNSLIHA 296

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C L +    T + NEM +  I P+ V F+ ++D   K G +  A  + + M+  G  PD
Sbjct: 297 LCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPD 356

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VVT+++L+DG+C   ++++ +K+ D M  K   PNV ++ ILIN  C+  R++ A   L+
Sbjct: 357 VVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLE 416

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q+    L+     YN +I G C  G +  A  +  EM      PD VT+ IL+   C   
Sbjct: 417 QMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH 476

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            + EA+ +   +       D +  N  I  + + G
Sbjct: 477 HLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAG 511



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 173/330 (52%), Gaps = 1/330 (0%)

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
           N  D+A+  F     ++  P T  F  L+  ++++            M SFG  PD+ T 
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N LI+  C +  +     +L ++  K    PD  T+ ++I G C  GK+ +A  ++++  
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKL-LKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G +P  VT+  L++G  KVGN  +A  +   M+     P+V+ ++++ID  C++ Q+ 
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L  EM  K +SP+++T+  LI+ALC           L ++  + ++P   +++ V+
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           D  CK G +  A+ +V  M ++  +PD VT+T L+ GHC++  M EA+ +F+ M+  GC 
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           P+  + N LI+   +    ++A  ++++ S
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMS 419



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 178/349 (51%), Gaps = 2/349 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            +  N L+N+         A  +  +  +L  QPD  TFN LI+GL   G++ +A   F 
Sbjct: 147 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFD 206

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
                G  PD+VTY TL++GLC+V   +    LL+ +  +    P+V+ Y ++I   CK 
Sbjct: 207 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM-VQKNCRPNVIAYNTIIDSLCKD 265

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            ++ +A  +++EM + GI P   T+N LI     +        +   M++   +P+VV F
Sbjct: 266 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           S+++D  C+ G +     + D M  + + P+V T+T L++  C  + +++A +    +  
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
              VP    YN +I+G+C+   +D+A  ++ +M  +    D VT+  LI G C  GR+  
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           AI++F++M+  G  PD +T   L+  L K     EA  ++ +A E  NL
Sbjct: 446 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM-VLLKAIEGSNL 493



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 172/334 (51%), Gaps = 1/334 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++R LC  G       +FD    +G  P+       ++   + G   AA  LL   
Sbjct: 184 TFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM 243

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   YN+++++L K     EA  +F E       PD +T+N LI  L  + E 
Sbjct: 244 VQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEW 303

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K       +M +    P++V ++T++  LC+   +A  H+++ ++  K    PDVVTYT+
Sbjct: 304 KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV-DMMIKRGVEPDVVTYTA 362

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G+C   +MD+A  +++ M   G  P+  ++N+LI+G+ ++  M  A  + E+M   G
Sbjct: 363 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 422

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + D VT+++LI G C  G+L   + L  EM      P++ T+ IL++ LCK + L +A 
Sbjct: 423 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 482

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
             LK ++ ++L     +YN  IDG C+AG ++ A
Sbjct: 483 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 516



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 157/343 (45%), Gaps = 1/343 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           ST  +  LL ++ K  +    + +  +       PD +T NILI     +  +  AF   
Sbjct: 111 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 170

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   GC PD  T+NTLI GLC   ++     L  +      F PDVVTY ++++G CK
Sbjct: 171 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT-IGEGFQPDVVTYGTLMNGLCK 229

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
           +G    A  +   M     +P+ + +N +ID   K   +  A  +   M++ G  PD+ T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++SLI   C   +      L +EM    + PNV  F+ +++ALCKE  +  A   +  + 
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              + P    Y  ++DG C    +DEA  +   M  K C P+  ++ ILI G+C   RM 
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +A+ +  +M   G   D +T N+LI  L   G    A  +   
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           T N+++ S C +        V   +   G  P++      +      GK   A  L  + 
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P  VT     Y +L+N L K  N   A+ + +   +   +P+   +N +I  L 
Sbjct: 209 IGEGFQPDVVT-----YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLC 263

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +  +V +AF  F +M + G SPDI TYN+LI  LC + E      LL E+   S+  P+V
Sbjct: 264 KDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM-VNSKIMPNV 322

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           V +++V+   CK G +  A  + + M   G++P  VT+  L+DG      M  A  + + 
Sbjct: 323 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 382

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G +P+V +++ LI+GYC+  ++++ + L ++M  + L  +  T+  LI+ LC   R
Sbjct: 383 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 442

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L  A     ++  +  +P    Y  ++D  CK  ++ EA V++  +E      D + + I
Sbjct: 443 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 502

Query: 513 LIIGHCMKGRMVEAISIFNKM 533
            I G C  G +  A  +F+ +
Sbjct: 503 AIDGMCRAGELEAARDLFSNL 523



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 58/169 (34%), Gaps = 35/169 (20%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +M   C     D    VFD M   G +PN       ++   +  + D A GLL Q 
Sbjct: 359 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 418

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF------------- 264
               +   T  YN+L++ L        A+ +F E       PD  T+             
Sbjct: 419 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 478

Query: 265 ----------------------NILIQGLSRIGEVKKAFEFFYDMGSFG 291
                                 NI I G+ R GE++ A + F ++   G
Sbjct: 479 AEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 181/368 (49%), Gaps = 18/368 (4%)

Query: 217 FRPGEVTMSTFMYNSLL-----------NALVKQNNADE---AVYMFKEYFRLYSQPDTW 262
           FR GEVT +   +  ++           N ++K  + D+   A  M          P+  
Sbjct: 120 FRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLSVDQIEVASRMLSLVLDCGPAPNVV 179

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           TF  LI G  + GE+ +AFE F  M   G +PD++ Y+TLI G  +   +  GH+L  + 
Sbjct: 180 TFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 239

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K     DVV ++S I  Y K G +  A  +Y  M   GI P+ VT+ +LI G  + G 
Sbjct: 240 LHKG-VKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGR 298

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  +  ++L  G  P VVT+SSLIDG+C+ G L  G  L ++M      P+V  + +
Sbjct: 299 IYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGV 358

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L++ LCK+  +  A RF  +     + P   ++N +IDG+C+    DEA  +   M    
Sbjct: 359 LVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYG 418

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN--- 559
            KPD  T T L+    M+GR+ E + +F +M ++G  PD +   +L+    K   P    
Sbjct: 419 IKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGL 478

Query: 560 EAFRIMQR 567
           + F +MQR
Sbjct: 479 QLFDLMQR 486



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 194/488 (39%), Gaps = 98/488 (20%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++   C+ G  D    +F  M   G  P+       +    +AG       L SQ 
Sbjct: 180 TFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 239

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +   +++S ++  VK      A  ++K        P+  T+ ILI+GL + G +
Sbjct: 240 LHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRI 299

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF  +  +   G  P +VTY++LI G C+   +  G  L +++  K  + PDVV Y  
Sbjct: 300 YEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDM-IKMGYPPDVVIYGV 358

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV----------------- 380
           ++ G CK G M  A     +     I+P+ V FN LIDG+ ++                 
Sbjct: 359 LVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYG 418

Query: 381 ------------------GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                             G +    ++  RM   G  PD V F +L+D +C+N +   GL
Sbjct: 419 IKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGL 478

Query: 423 KLCDEM--------------------KGKN---------------LSPNVYTFTILINAL 447
           +L D M                    KG++               + P++ T+  +I   
Sbjct: 479 QLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGY 538

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVI---------------------------D 480
           C   RL++A R  + LK+    P       +I                           D
Sbjct: 539 CSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIID 598

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK G VDEA  I  +  + +  PD V + ILI G C  GR+VEA  ++  MLR G  P
Sbjct: 599 GLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKP 658

Query: 541 DDITVNSL 548
           DD+   +L
Sbjct: 659 DDLLQRAL 666



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 2/300 (0%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           ++  L R GEV KA +F   +   G   DIV+ N ++ GL  V+++     +L  V    
Sbjct: 115 VLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGL-SVDQIEVASRMLSLV-LDC 172

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             +P+VVT+ ++I+G+CK G+MD+A  ++  M   GI P  + ++ LIDG+ K G +   
Sbjct: 173 GPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMG 232

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +  + L  G   DVV FSS ID Y + G L     +   M  + +SPNV T+TILI  
Sbjct: 233 HKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKG 292

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LC++ R+ +A     Q+    L P    Y+ +IDGFCK GN+     +  +M +    PD
Sbjct: 293 LCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPD 352

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            V + +L+ G C +G M+ A+    K L     P+ +  NSLI    +    +EA ++ +
Sbjct: 353 VVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFR 412



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 172/413 (41%), Gaps = 36/413 (8%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  PN       ++   + G+ D A  L        +      Y++L++   K       
Sbjct: 173 GPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMG 232

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             +F +      + D   F+  I    + G +  AF+ +  M   G SP++VTY  LI G
Sbjct: 233 HKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKG 292

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           LC+   +     +  ++  K    P VVTY+S+I G+CK G +     +Y +M   G  P
Sbjct: 293 LCQDGRIYEAFGIYCQI-LKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPP 351

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             V + VL+DG  K G M+ A     + L     P+VV F+SLIDG+CR  + ++ LK+ 
Sbjct: 352 DVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVF 411

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC-- 483
             M    + P+V T T L+     E RL +      ++    L P    +  ++D FC  
Sbjct: 412 RLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKN 471

Query: 484 ---------------------------------KAGNVDEANVIVAEMEEKRCKPDKVTF 510
                                            K  +V+EA+     + E + +PD VT+
Sbjct: 472 MKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTY 531

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             +I G+C   R+ EA  IF  +      P+ +T+  LI  L K    + A R
Sbjct: 532 NTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALR 584



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 4/146 (2%)

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KLC   +G  +   V     +++AL ++  +  A  F + +            N ++ G 
Sbjct: 98  KLC---RGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGL 154

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
                ++ A+ +++ + +    P+ VTF  LI G C +G M  A  +F  M + G APD 
Sbjct: 155 -SVDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDL 213

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRA 568
           I  ++LI    K GM     ++  +A
Sbjct: 214 IAYSTLIDGYFKAGMLGMGHKLFSQA 239


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 204/440 (46%), Gaps = 37/440 (8%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +M+  C  G   S  V+ + +   G +PN       +  C + G  + A    S+ +   
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +  S +  NS+L   +K  +   A  MF +        + +TFN L+  L + G++ +A 
Sbjct: 211 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALE-SGLANVFTFNTLLSWLCKEGKMNEAC 269

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             + ++ + G SP++V+YN +I G CR + +    ++ KE+   + F+P+ VT+T ++ G
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM-LDNGFTPNAVTFTILMDG 328

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVT-------------------------------- 369
           Y K G ++ A  I++ M    I P+  T                                
Sbjct: 329 YFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPT 388

Query: 370 ---FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
              +N +IDGF K GN+  A  +   M   G  P  VT++SLIDG+C+   ++  LKL +
Sbjct: 389 CMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLN 448

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           +MK K L  ++  +  LI+  CK   +  A   L +L+   L P  F+YN +I GF    
Sbjct: 449 DMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN 508

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           NV+EA  +  +M  +    D  T+T LI G    GR++ A  I  +ML  G  PDD    
Sbjct: 509 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 568

Query: 547 SLISCLLKGGMPNEAFRIMQ 566
            LI+ L   G    A +I++
Sbjct: 569 VLINGLCNKGQFENARKILE 588



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 198/416 (47%), Gaps = 2/416 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S +  N+++ ++    +    + + + M   G   +   +   + +C++ G    A+   
Sbjct: 4   SIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHF 63

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            Q +   V +    Y+  ++ L  + N+  A+ + +E       P   TF  +I    + 
Sbjct: 64  LQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKE 123

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V +A     DM + G S ++    +L+ G C    +     L+ E+  +S   P+ VT
Sbjct: 124 GNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEIS-ESGLVPNKVT 182

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+ +I G CK G ++KA   Y+EM + GI+ S  + N +++G+ K  +  +A  M    L
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G L +V TF++L+   C+ G++N+   L DE+  K +SPNV ++  +I   C+++ +N
Sbjct: 243 ESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 301

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A +  K++  N   P    +  ++DG+ K G+++ A  I   M++    P   T  I+I
Sbjct: 302 AACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 361

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            G C  GR  E   +FNK +  G  P  +  N++I   +K G  N A  + +   E
Sbjct: 362 KGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCE 417



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 183/398 (45%), Gaps = 1/398 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ G  +    ++D + + G  PN       +    R    +AA  +  + 
Sbjct: 251 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 310

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +   +  L++   K+ + + A  +F         P   T  I+I+GL + G  
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +  + F    S G  P  + YNT+I G  +   +     + +E+  +   +P  VTYTS
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM-CEVGITPSTVTYTS 429

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK   +D A  + N+M   G+K     +  LIDGF K  +M SA  +   +   G
Sbjct: 430 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 489

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+   ++S+I G+     + + + L  +M  + +  ++ T+T LI+ L K  RL  A 
Sbjct: 490 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYAS 549

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    ++P    +  +I+G C  G  + A  I+ +M  K   P  + +  LI GH
Sbjct: 550 DIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGH 609

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             +G + EA  + ++ML  G  PD+IT + L++   KG
Sbjct: 610 FKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 647



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 63/132 (47%)

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           ++P++    IL+ A+ ++N   +AR    ++    +    F  + ++    K GN+ EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
               + + +  + D+  ++I +   C+K     A+S+  +M   G  P + T  S+I+  
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 553 LKGGMPNEAFRI 564
           +K G   EA R+
Sbjct: 121 VKEGNVAEALRL 132



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 51/123 (41%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  +    KTY  ++  L + G       +   M S G LP+       ++     G+ 
Sbjct: 521 VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQF 580

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A+ +L       +  S  +YN+L+    K+ N  EA  +  E       PD  T++IL
Sbjct: 581 ENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDIL 640

Query: 268 IQG 270
           + G
Sbjct: 641 VNG 643


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 180/339 (53%), Gaps = 3/339 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y +LLN L K      A+ + +      ++P+   ++ +I GL +   V +A++ + +M 
Sbjct: 118 YGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMD 177

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           +    P+++TYNTLI   C   ++     LL E+  K+  +PDV T++ +I   CK GK 
Sbjct: 178 AREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN-INPDVYTFSILIDALCKEGK- 235

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  I++ M   G+ P+  ++N++I+G  K   +  A  +   ML    +PD VT++SL
Sbjct: 236 -NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 294

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG C++G++   L L +EM  +    +V T+T L++ALCK   L+ A     ++K   +
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  + Y  +IDG CK G +  A  +   +  K C  D  T+T++I G C +G   EA++
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 414

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           I +KM   GC P+ +T   +I  L +    ++A +++  
Sbjct: 415 IKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHE 453



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 174/357 (48%), Gaps = 3/357 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  +M+ LC  G    +    D + +     N       ++   + G+   A  LL   
Sbjct: 82  TWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMI 141

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  MY+++++ L K    +EA  ++ E       P+  T+N LI      G++
Sbjct: 142 EDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQL 201

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AF   ++M     +PD+ T++ LI  LC+  + A+    +     +   +P+V +Y  
Sbjct: 202 MGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQ---IFHAMVQMGVNPNVYSYNI 258

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G CK  ++D+A  +  EM    + P  VT+N LIDG  K G + SA  +   M   G
Sbjct: 259 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 318

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              DVVT++SL+D  C+N  L++   L  +MK + + P +YT+T LI+ LCK  RL +A+
Sbjct: 319 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQ 378

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              + L         + Y  +I G CK G  DEA  I ++ME+  C P+ VTF I+I
Sbjct: 379 ELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 435



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 199/413 (48%), Gaps = 3/413 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++ SL ++  + +V  +   M   G   N   +   ++     G+   +  LL +  
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +T  + +L+  L  +    + ++   +      Q +  ++  L+ GL + GE +
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A +    +      P++V Y+ +I GLC+   V   ++L  E+  +  F P+V+TY ++
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF-PNVITYNTL 191

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I  +C  G++  A  + +EM    I P   TF++LID   K G   +A+ +   M+  G 
Sbjct: 192 ICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGV 249

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+V +++ +I+G C+  ++++ + L  EM  KN+ P+  T+  LI+ LCK  R+  A  
Sbjct: 250 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 309

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            + ++           Y  ++D  CK  N+D+A  +  +M+E+  +P   T+T LI G C
Sbjct: 310 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC 369

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             GR+  A  +F  +L  GC  D  T   +IS L K GM +EA  I  +  ++
Sbjct: 370 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 422



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 119/228 (52%), Gaps = 1/228 (0%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP ++ +  ++    KL        +  +M+  GI+ + VT ++LI+ F  +G M  +  
Sbjct: 8   SP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  ++L  GY P+ +T+++L+ G C  G++ + L   D++  +    N  ++  L+N LC
Sbjct: 67  LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K      A + L+ ++     P   MY+ +IDG CK   V+EA  + +EM+ +   P+ +
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           T+  LI   C+ G+++ A S+ ++M+     PD  T + LI  L K G
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG 234



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 3/276 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ + C  G       +   M      P+       + +  + GK   AK +    
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAM 244

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  + + YN ++N L K    DEA+ + +E       PDT T+N LI GL + G +
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M   G   D+VTY +L+  LC+   + +   L  ++K +    P + TYT+
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG-IQPTMYTYTA 363

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G++  A  ++  +   G      T+ V+I G  K G    A  ++ +M   G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +P+ VTF  +I       + ++  KL  EM  K L
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 3/249 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           ++N    T+++++ +LC+ G   + + +F  M   G  PN       ++   +  + D A
Sbjct: 215 NINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             LL +     +   T  YNSL++ L K      A+ +  E        D  T+  L+  
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 332

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L +   + KA   F  M   G  P + TY  LI GLC+   +    EL + +  K     
Sbjct: 333 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG-CCI 391

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DV TYT +ISG CK G  D+A  I ++M   G  P+AVTF ++I    +      AE + 
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLL 451

Query: 391 ERMLSFGYL 399
             M++ G L
Sbjct: 452 HEMIAKGLL 460



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 90/200 (45%)

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           + FN ++    K+   ++   + ++M   G   ++VT S LI+ +C  GQ+     L  +
Sbjct: 11  IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           +      PN  T+T L+  LC +  +     F  ++           Y  +++G CK G 
Sbjct: 71  ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
              A  ++  +E++  +P+ V ++ +I G C    + EA  ++++M      P+ IT N+
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT 190

Query: 548 LISCLLKGGMPNEAFRIMQR 567
           LI      G    AF ++  
Sbjct: 191 LICAFCLAGQLMGAFSLLHE 210


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 160/287 (55%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAM 203

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A G+++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 263

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++MLS   LPD++T+++LI G C+ G L Q   L DEM  K L P+ +T+T L
Sbjct: 264 DLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 323

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T+++   C KG + +   +  +M R G AP  +T N L++
Sbjct: 384 KPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 207/431 (48%), Gaps = 28/431 (6%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N +  H+  +Y  ++  LC   L    +                +IE  VS   R G
Sbjct: 9   SPANSTFRHTLHSYCTMIHFLCTHQLLSEAK---------------SLIEVVVS---RKG 50

Query: 206 KCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-- 262
           K  A+    +     G      ++++ L+ A ++     +A+    E +RL  +   W  
Sbjct: 51  KGSASAVFAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAI----ECYRLTREHKLWVP 106

Query: 263 --TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T   +++ L ++   K  + F+ ++   G    +  +N L+   C+  ++     +  
Sbjct: 107 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 166

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  K    P VV+Y ++++GY +LG +D+   + + M + G++P   T++VLI+G  K 
Sbjct: 167 AIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKE 225

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             M  A  + + ML  G +P+ VTF++LIDG+C+NG+++  +++  +M  ++L P++ T+
Sbjct: 226 SKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITY 285

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI  LCK+  L  A   + ++    L P  F Y  +IDG CK G++D A      M +
Sbjct: 286 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 345

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  + D V +T LI G C +GR V+A  +  +ML +G  PD  T   +++   K G   +
Sbjct: 346 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWK 405

Query: 561 AFRIMQRASED 571
             ++++    D
Sbjct: 406 GSKLLKEMQRD 416



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 158/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   + L  E+  K    P+ VT+T++I G+CK
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKG-LVPNGVTFTTLIDGHCK 259

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++  A  + + M   G  PD  T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 319

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +++ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 380 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 68/148 (45%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G       + D M   G  P+       +  C + G  D A     + 
Sbjct: 284 TYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRM 343

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    Y +L++ L ++  + +A  M +E   +  +PDT T+ +++    + G+V
Sbjct: 344 IQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDV 403

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISG 305
            K  +   +M   G +P +VTYN L++G
Sbjct: 404 WKGSKLLKEMQRDGHAPSVVTYNVLMNG 431


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 3/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++NLV++++C++GL D    VF  M      P+       +    +  + D A  LL + 
Sbjct: 174 SFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 233

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      S+  +N L+N L K+ +      +    F     P+  T+N +I GL   G++
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      M +  C P+ VTY TLI+GL +      G  LL  ++ +   + +   Y++
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE-YAYST 352

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG  K  K ++A G++ +M   G +P+ V ++ LIDG  + G +  A+ +   M++ G
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+  T+SSLI G+ + G   + +++  EM   N  PN   +++LI+ LC++ +L +A 
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 472

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPDKVTFTILII 515
                +    L P    Y+ +I G C AG+V+    +  EM  +E   +PD VT+ IL+ 
Sbjct: 473 MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLR 532

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             C +  +  AI + N ML  GC PD IT N  ++ L
Sbjct: 533 ALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 178/335 (53%), Gaps = 1/335 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           ++ +   +N ++ A+ K    D A+ +F+E      +PD +T+  L+ GL +   + +A 
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M   GC P  VT+N LI+GLC+  ++ R  +L+  +  K    P+ VTY ++I+G
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG-CVPNEVTYNTIING 286

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C  GK+DKA  + + M +    P+ VT+  LI+G  K G  V   ++   +   G+  +
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 346

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
              +S+LI G  +  +  + + L  +M  K   PN+  ++ LI+ LC+E +L++A+  L 
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++      P  F Y+ +I GF K GN  +A  +  EM +  C P+++ +++LI G C  G
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDG 466

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++ EA+ ++  ML  G  PD +  +S+I  L   G
Sbjct: 467 KLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAG 501



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 181/335 (54%), Gaps = 3/335 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYF--RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           +NS+LN ++++     A+  ++     +    P+  +FN++I+ + ++G V +A E F +
Sbjct: 138 FNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 197

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M    C PD+ TY TL+ GLC+ + +     LL E++ +  F P  VT+  +I+G CK G
Sbjct: 198 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF-PSSVTFNVLINGLCKKG 256

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            M + T + + M   G  P+ VT+N +I+G    G +  A  + +RM++   +P+ VT+ 
Sbjct: 257 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 316

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +LI+G  + G+   G+ L   ++ +    N Y ++ LI+ L KE +  +A    K++   
Sbjct: 317 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 376

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P   +Y+ +IDG C+ G +DEA  I+ EM  K C P+  T++ LI G    G   +A
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           I ++ +M +  C P++I  + LI  L + G   EA
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 471



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 173/312 (55%), Gaps = 5/312 (1%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFG---CSPDIVTYNTLISGLCRVNEVARGHELL 319
           +FN ++  + + G   +A EF Y+ G  G    SP+++++N +I  +C++  V R  E+ 
Sbjct: 137 SFNSVLNVIIQEGLFHRALEF-YECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVF 195

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E+  + +  PDV TY +++ G CK  ++D+A  + +EM   G  PS+VTFNVLI+G  K
Sbjct: 196 REMAIQ-KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 254

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G+MV    + + M   G +P+ VT++++I+G C  G+L++ + L D M      PN  T
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  LIN L K+ R  D    L  L+        + Y+ +I G  K    +EA  +  +M 
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           EK C+P+ V ++ LI G C +G++ EA  I  +M+  GC P+  T +SLI    K G   
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 560 EAFRIMQRASED 571
           +A R+ +  +++
Sbjct: 435 KAIRVWKEMAKN 446



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 190/401 (47%), Gaps = 21/401 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC+ G    V  + D M   G +PN       ++     GK D A  LL + 
Sbjct: 244 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 303

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   Y +L+N LVKQ  + + V++           + + ++ LI GL +  + 
Sbjct: 304 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 363

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   +  M   GC P+IV Y+ LI GLCR  ++    E+L E+  K   +P+  TY+S
Sbjct: 364 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG-CTPNAFTYSS 422

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ K G   KA  ++ EM      P+ + ++VLI G  + G +  A  M   ML  G
Sbjct: 423 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 482

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM--KGKNLSPNVYTFTILINALCKENRLND 455
             PDVV +SS+I G C  G +  GLKL +EM  +  +  P+V T+ IL+ ALCK+N ++ 
Sbjct: 483 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 542

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD--KVTFTIL 513
           A   L               N ++D  C   ++   N+ +  + EK   P   +     L
Sbjct: 543 AIDLL---------------NSMLDRGCNP-DLITCNIFLNALREKLNPPQDGREFLDEL 586

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           ++    + R+V A  I   ML+    P+  T   +I  L K
Sbjct: 587 VVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 149/354 (42%), Gaps = 57/354 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  D    + D M +   +PN       ++  ++ G+      LLS  
Sbjct: 279 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 338

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + + Y++L++ L K+  ++EA+ ++K+      QP+   ++ LI GL R G++
Sbjct: 339 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 398

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGL--------------------CRVNEVARG-- 315
            +A E   +M + GC+P+  TY++LI G                     C  NE+     
Sbjct: 399 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL 458

Query: 316 -HELLKEVKFKSE-----------FSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSC 361
            H L ++ K +               PDVV Y+S+I G C  G ++    ++NEM     
Sbjct: 459 IHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQES 518

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT----------------- 404
             +P  VT+N+L+    K  ++  A  +   ML  G  PD++T                 
Sbjct: 519 DSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQD 578

Query: 405 ----FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                  L+    +  ++    K+ + M  K L PN  T+  +I  LCK  ++ 
Sbjct: 579 GREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/289 (35%), Positives = 162/289 (56%), Gaps = 1/289 (0%)

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           + FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K 
Sbjct: 125 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KS 183

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
               +   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G
Sbjct: 184 AMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNG 243

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + +RMLS   LPD++T+++LI G C+NG L Q   L DEM  K L P+ +T+T
Sbjct: 244 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYT 303

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+  CKE  L+ A +  K++   ++      Y  +I G C+ G   +A  ++ EM   
Sbjct: 304 TLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSV 363

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             KPD  T+T++I   C KG + +   +  +M R G AP  +T N L++
Sbjct: 364 GLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 412



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 158/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 123 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK
Sbjct: 183 SAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LIPNGVTFTTLIDGHCK 241

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY  M S  + P  +T+N LI G  K G++  A  + + M   G  PD  T
Sbjct: 242 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFT 301

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   K    M  +N+  +   +T LI+ LC+E +  DA + L+++ 
Sbjct: 302 YTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREML 361

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 362 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 186/369 (50%), Gaps = 13/369 (3%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
           +I+  VS   R GK  A+    +     G      ++++ L+ A ++     +A+    E
Sbjct: 23  LIQLVVS---RKGKGSASVVFATILETKGTQRSDIYVFSGLITAYLESGFLRDAI----E 75

Query: 252 YFRLYSQPDTW----TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
            +RL  +   W    T   +++ L ++   K  + F+ ++   G    +  +N L+   C
Sbjct: 76  CYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFC 135

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  ++     +   +  K    P VV+Y ++++GY +LG +D+   + + M + G++P  
Sbjct: 136 KDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDV 194

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T++VLI+G  K   M  A  + + ML  G +P+ VTF++LIDG+C+NG+++  +++   
Sbjct: 195 YTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKR 254

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  ++L P++ T+  LI  LCK   L  A   + ++    L P  F Y  +IDG CK G+
Sbjct: 255 MLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 314

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +D A      M ++  + D V +T LI G C +G+ V+A  +  +ML +G  PD  T   
Sbjct: 315 LDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTM 374

Query: 548 LISCLLKGG 556
           +I+   K G
Sbjct: 375 IINEFCKKG 383



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 145/292 (49%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 123 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  + 
Sbjct: 183 SAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKN 242

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S    PD++TYNTLI GLC+  ++ + H+L+ E+  K    PD  T
Sbjct: 243 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKG-LKPDKFT 301

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   ML
Sbjct: 302 YTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREML 361

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           S G  PD+ T++ +I+ +C+ G + +G KL  EM+    +P+V T+ +L+N 
Sbjct: 362 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 130/225 (57%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +CK G +  A  +++ +   G++PS V++N L++G+ ++G++     ++  ML+ G  PD
Sbjct: 134 FCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPD 193

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V T+S LI+G C+  +++   +L DEM  K L PN  TFT LI+  CK  R++ A    K
Sbjct: 194 VYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYK 253

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++    L+P    YN +I G CK G++ +A+ ++ EM  K  KPDK T+T LI G C +G
Sbjct: 254 RMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 313

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +  A     +M++     DD+   +LIS L + G   +A ++++
Sbjct: 314 DLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLR 358



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 124/224 (55%), Gaps = 1/224 (0%)

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G Y E+  CG   S   FN+L+  F K G++  A+ + + +  +G  P VV++++L++GY
Sbjct: 110 GFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGY 169

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            R G L++G +L   M    + P+VYT+++LIN LCKE++++DA     ++    L+P  
Sbjct: 170 IRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNG 229

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             +  +IDG CK G VD A  I   M  +   PD +T+  LI G C  G + +A  + ++
Sbjct: 230 VTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDE 289

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           M   G  PD  T  +LI    K G  + AF+  +R  + +N++L
Sbjct: 290 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQ-ENIRL 332


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 185/354 (52%), Gaps = 6/354 (1%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           RP  V +  F     L ++ K+      V +  +        + +T NILI  L R+  +
Sbjct: 83  RPSFVELGKF-----LGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHI 137

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A      M   G  PD VT+ TLI+GLC    +    EL  E+  +    P+ VT+T 
Sbjct: 138 HFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM-PNTVTFTI 196

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK G + +A  ++  M   G++P+  T+N L++G+     M  A  + E M+  G
Sbjct: 197 LVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKG 256

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P V ++S LI+GYC++ ++++   L  +M  K L PN  T+  L+  LC  + L +A+
Sbjct: 257 CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQ 316

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K++  + ++P    Y+ ++DG CK G+++EA  ++  M+E++ +PD V + ILI G 
Sbjct: 317 ELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGM 376

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            + G++  A  +F+K+   G  P   T N +I  LLK G+ +EA+++ ++  +D
Sbjct: 377 FIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDD 430



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 215/431 (49%), Gaps = 15/431 (3%)

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMS 225
           ++G+ D++   +  +  +   P    +E   F+ S  +  +      L +Q     V  +
Sbjct: 64  DIGIDDAMASFYRMIHMN---PRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHN 120

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
            +  N L+N+L + ++   AV +  + F+L  QPD+ TF  LI GL   G +K+A E F 
Sbjct: 121 DYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFN 180

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
           +M      P+ VT+  L+  LC+   V+    + + +  K    P++ TY ++++GYC  
Sbjct: 181 EMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKG-VEPNIYTYNALMNGYCLR 239

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
            +M+ A+ ++  M   G  PS  ++++LI+G+ K   +  A+ +  +M     +P+ VT+
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTY 299

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           ++L+ G C    L +  +L  +M    + PN+ T++IL++ LCK   L +A + L  ++ 
Sbjct: 300 NTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQE 359

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L P   +YN +I G   AG ++ A  + +++     +P   T+ I+I G   +G   E
Sbjct: 360 RKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDE 419

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM-----QRASEDQNLQLPSWK 580
           A  +F KM   G  PD  + N +I   L+   P+ A +++     +R S D +    ++K
Sbjct: 420 AYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSS----TFK 475

Query: 581 KAVPLRTNTDI 591
             + L ++ +I
Sbjct: 476 MLLDLESHDEI 486



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 3/289 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGKCDAAKGLLSQ 216
           T+ +++  LC+ G+    + VF+ M   G  PN       ++  C+R    DA+K     
Sbjct: 193 TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM 252

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G    S   Y+ L+N   K    DEA  +  +       P+T T+N L+QGL     
Sbjct: 253 VGKG-CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASS 311

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A E F  M S G  P++ TY+ L+ GLC+   +    +LL  ++ + +  PD+V Y 
Sbjct: 312 LLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ-ERKLEPDIVLYN 370

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G    GK++ A  +++++ + GI+PS  T+N++I G  K G    A  +  +M   
Sbjct: 371 ILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDD 430

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           G+LPD  +++ +I G+ +N   +  ++L DEM G+  S +  TF +L++
Sbjct: 431 GFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 198/406 (48%), Gaps = 24/406 (5%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N +F T+N+++   C++GL      V   +   G+ P+   +  F+      G+   A 
Sbjct: 99  INPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQAL 158

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
               +       +    Y +L+N L K      A+ + +       Q +   +N +I G+
Sbjct: 159 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGM 218

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           S+   V  AF+ + +M +   SPD+VTY+ LI G   V ++    +L  ++  ++   PD
Sbjct: 219 SKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILEN-IKPD 277

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V T+  ++ G+CK G++ KA  + + M    IKP+  TFN L+DGF K   M   + +  
Sbjct: 278 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFA 337

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G  P+VVT+ SL+DGYC   Q+N+  K+ + M  + ++ NV+++ I+IN  CK  
Sbjct: 338 MMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIK 397

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF- 510
           +++ A +   ++    ++P    YN +IDG CK+G +  A  +V EM ++   P+ +T+ 
Sbjct: 398 KVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYN 457

Query: 511 ----------------------TILIIGHCMKGRMVEAISIFNKML 534
                                 TILI G C  G++  A  +F  +L
Sbjct: 458 SILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 206/411 (50%), Gaps = 16/411 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
           +N ++ SL +   + +V  +   M  +G  PN       ++   + G    A  +L++  
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
              + P  +T++TF+    L   + Q     A+    +   L    D  ++  LI GL +
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQ-----ALNFHDKLVALGFHLDQVSYGTLINGLCK 185

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +GE + A +    +       + V YNT+I G+ +   V    +L  E+  K   SPDVV
Sbjct: 186 VGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAK-RISPDVV 244

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+++I G+  +GK+  A  ++N+M    IKP   TFN+L+DGF K G +  A+ + + M
Sbjct: 245 TYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMM 304

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +     P+V TF++L+DG+C++ ++ +G  +   M  + + PNV T+  L++  C   ++
Sbjct: 305 MIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQV 364

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           N A++    +    +      YN +I+GFCK   VD+A  +  EM  K   PD VT+  L
Sbjct: 365 NKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSL 424

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL-----KGGMPN 559
           I G C  G++  A  + N+M   G  P+ IT NS+++ LL     +G  PN
Sbjct: 425 IDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPN 475



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 198/411 (48%), Gaps = 42/411 (10%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +S+   +   D A  L +       T++ F +N +L +LVK  +    + + ++      
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVAR 314
            P+  TFNILI    ++G +  AF     +   G  PDI+T NT I G C   ++++   
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
            H+ L  + F      D V+Y ++I+G CK+G+   A  +   ++   ++ +AV +N +I
Sbjct: 160 FHDKLVALGF----HLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVI 215

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           DG  K  ++  A  +   M++    PDVVT+S+LI G+   G+L   + L ++M  +N+ 
Sbjct: 216 DGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIK 275

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+VYTF IL++  CKE RL  A+  L  +   D+ P    +N ++DGFCK   + E   +
Sbjct: 276 PDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA--------------- 539
            A M ++  KP+ VT+  L+ G+C+  ++ +A  IFN M + G                 
Sbjct: 336 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCK 395

Query: 540 --------------------PDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
                               PD +T NSLI  L K G  + AF+++    +
Sbjct: 396 IKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHD 446



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 168/346 (48%), Gaps = 5/346 (1%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F+  S ++     N+ D AV +F            + FN ++  L +             
Sbjct: 34  FIPYSSISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQ 93

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G +P+ VT+N LI+  C++  +     +L ++  K  + PD++T  + I G+C  G
Sbjct: 94  MEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKI-LKMGYEPDIITLNTFIKGFCLKG 152

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           ++ +A   ++++ + G     V++  LI+G  KVG   +A  +  R+       + V ++
Sbjct: 153 QIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYN 212

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           ++IDG  ++  +N    L  EM  K +SP+V T++ LI       +L DA     ++   
Sbjct: 213 TVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILE 272

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           ++ P  + +N ++DGFCK G + +A  ++  M  +  KP+  TF  L+ G C   +M E 
Sbjct: 273 NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEG 332

Query: 527 ISIFNKMLRIGCAPDDITVNSLIS--CLLKGGMPNEAFRIMQRASE 570
            ++F  M++ G  P+ +T  SL+   CL+K    N+A +I    S+
Sbjct: 333 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVK--QVNKAKKIFNTMSQ 376


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 160/287 (55%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAM 184

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A G+++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 185 LASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 244

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++MLS   LPD++T+++LI G C+ G L Q   L DEM  K L P+ +T+T L
Sbjct: 245 DLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 304

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 305 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 364

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T+++   C KG + +   +  +M R G AP  +T N L++
Sbjct: 365 KPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 411



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 194/384 (50%), Gaps = 13/384 (3%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
           +IE  VS   R GK  A+    +     G      ++++ L+ A ++     +A+    E
Sbjct: 22  LIEVVVS---RKGKGSASAVFAAVLETXGNQRSDIYVFSGLITAYLESGFLRDAI----E 74

Query: 252 YFRLYSQPDTW----TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
            +RL  +   W    T   +++ L ++   K  + F+ ++   G    +  +N L+   C
Sbjct: 75  CYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC 134

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  ++     +   +  K    P VV+Y ++++GY +LG +D+   + + M + G++P  
Sbjct: 135 KDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDV 193

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T++VLI+G  K   M  A  + + ML  G +P+ VTF++LIDG+C+NG+++  +++  +
Sbjct: 194 YTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 253

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  ++L P++ T+  LI  LCK+  L  A   + ++    L P  F Y  +IDG CK G+
Sbjct: 254 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 313

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +D A      M ++  + D V +T LI G C +GR V+A  +  +ML +G  PD  T   
Sbjct: 314 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 373

Query: 548 LISCLLKGGMPNEAFRIMQRASED 571
           +++   K G   +  ++++    D
Sbjct: 374 IVNEFCKKGDVWKGSKLLKEMQRD 397



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 158/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   + L  E+  K    P+ VT+T++I G+CK
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKG-LVPNGVTFTTLIDGHCK 240

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++  A  + + M   G  PD  T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 300

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +++ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 361 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 143/292 (48%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D A  +F E       P+  TF  LI G  + 
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S    PD++TYNTLI GLC+  ++ + H+L+ E+  K    PD  T
Sbjct: 242 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG-LKPDKFT 300

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   ML
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           S G  PD  T++ +++ +C+ G + +G KL  EM+    +P+V T+ +L+N 
Sbjct: 361 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 1/260 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  S  +YN +M     +G  D    +   M + G  P+       ++   +  K D A 
Sbjct: 154 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGAN 213

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           GL  +     +  +   + +L++   K    D A+ ++K+       PD  T+N LI GL
Sbjct: 214 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 273

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G++K+A +   +M   G  PD  TY TLI G C+  ++    E  K +  +     D
Sbjct: 274 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRM-IQENIRLD 332

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            V YT++ISG C+ G+   A  +  EM S G+KP   T+ ++++ F K G++     + +
Sbjct: 333 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLK 392

Query: 392 RMLSFGYLPDVVTFSSLIDG 411
            M   G+ P VVT++ L++G
Sbjct: 393 EMQRDGHAPSVVTYNVLMNG 412


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 191/371 (51%), Gaps = 6/371 (1%)

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G  D A   L++ R   V  +T   N +L  L +         + +  F     P+ +TF
Sbjct: 147 GLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG----LVRRLFEHLPAPNVFTF 202

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           NI+I  L + GE+ +A   F  M + GCSPD+VTYN+LI G  +  E+     L+ E++ 
Sbjct: 203 NIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR- 261

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           KS  + DVVTY ++I+ + K G ++KA   + EM   G+  + VT +  +D F K G + 
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  +  +M   G +P+  T++SL+DG C+ G+L+  + L DEM  + L PNV T+T+++
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           + LCKE ++  A   L  ++   +     +Y  +I G     N + A  ++ EM+ K  +
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            D   +  LI G C   ++ EA S+ +KM   G  P+ +   +++    K G  +EA  +
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501

Query: 565 MQRASEDQNLQ 575
           + +   D  LQ
Sbjct: 502 LHKIP-DSGLQ 511



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 191/404 (47%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G  +     F  M+  G + N   +  FV +  + G    A  L +Q 
Sbjct: 271 TYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM 330

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + F Y SL++   K    D+A+ +  E       P+  T+ +++ GL + G+V
Sbjct: 331 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 390

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M   G   + + Y TLI G        R  +LL E+K K     DV  Y +
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG-MELDVSLYGT 449

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK+ K+D+A  + ++M+ CG++P+ V +  ++D F K G    A  +  ++   G
Sbjct: 450 LIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSG 509

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VVT+ +LIDG C+ G + + +   D+M+   L PNV  +T LI+  CK   L+ A 
Sbjct: 510 LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAV 569

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++    +     +Y  +IDG  K G++  A  + A+M E   + D   +T  I G 
Sbjct: 570 HLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGF 629

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C    M EA  + ++M+  G  PD    N LI    K G   EA
Sbjct: 630 CNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEA 673



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 190/381 (49%), Gaps = 3/381 (0%)

Query: 187 HLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           HLP   +  F   +    + G+   A+ L  + +    +     YNSL++   K    +E
Sbjct: 193 HLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEE 252

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
              +  E  +     D  T+N LI   S+ G ++KA+ +F +M   G   ++VT +T + 
Sbjct: 253 VELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVD 312

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
             C+   V    +L  +++ +    P+  TYTS++ G CK G++D A  + +EM   G+ 
Sbjct: 313 AFCKEGLVREAMKLFAQMRVRG-MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 371

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ VT+ V++DG  K G +  A+ +   M   G   + + +++LI G+  N    + L L
Sbjct: 372 PNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDL 431

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            +EMK K +  +V  +  LI  LCK  +L++A+  L ++    L P   +Y  ++D F K
Sbjct: 432 LNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFK 491

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           AG   EA  ++ ++ +   +P+ VT+  LI G C  G + EAIS F+KM  +G  P+   
Sbjct: 492 AGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQV 551

Query: 545 VNSLISCLLKGGMPNEAFRIM 565
             +LI    K G  ++A  +M
Sbjct: 552 YTTLIDGFCKIGSLSKAVHLM 572



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR---IGEVKKAFEFF 284
           ++++LL+ L      D+AV       +L   P+T T N ++  L+R    G V++ FE  
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
                   +P++ T+N +I  LC+  E+     L   +K     SPDVVTY S+I GY K
Sbjct: 195 P-------APNVFTFNIVIDFLCKQGELVEARALFVRMKAMG-CSPDVVTYNSLIDGYGK 246

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++++   + +EM   G     VT+N LI+ F K G +  A      M   G + +VVT
Sbjct: 247 CGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
            S+ +D +C+ G + + +KL  +M+ + + PN +T+T L++  CK  RL+DA   L ++ 
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              LVP    Y  ++DG CK G V  A+ +++ ME    K +++ +T LI GH M     
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            A+ + N+M   G   D     +LI  L K    +EA  ++ +  +
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDD 472



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 196/419 (46%), Gaps = 2/419 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+V+  LC+ G     + +F  M++ G  P+       +    + G+ +  + L+S+ 
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN+L+N   K    ++A   F E  RL    +  T +  +    + G V
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLV 320

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F  M   G  P+  TY +L+ G C+   +     LL E+  +    P+VVTYT 
Sbjct: 321 REAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG-LVPNVVTYTV 379

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK GK+  A  + + M   G+K + + +  LI G     N   A  +   M + G
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              DV  + +LI G C+  +L++   L  +M    L PN   +T +++A  K  + ++A 
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV 499

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++  + L P    Y  +IDG CKAG++ EA     +M E    P+   +T LI G 
Sbjct: 500 ALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGF 559

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           C  G + +A+ + N+M+  G + D +   SLI   +K G    AF +  +  E   LQL
Sbjct: 560 CKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIE-TGLQL 617



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 170/361 (47%), Gaps = 2/361 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            +K     RV   + + F TY  ++   C+ G  D   V+ D M   G +PN       V
Sbjct: 323 AMKLFAQMRVRGMMPNEF-TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               + GK   A  +LS      V  +  +Y +L++      N++ A+ +  E      +
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            D   +  LI GL ++ ++ +A    + M   G  P+ V Y T++    +  + +    L
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L ++   S   P+VVTY ++I G CK G + +A   +++M   G+ P+   +  LIDGF 
Sbjct: 502 LHKIP-DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFC 560

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K+G++  A ++   M+  G   D V ++SLIDG+ + G L     L  +M    L  ++Y
Sbjct: 561 KIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLY 620

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +T  I+  C  N + +AR  L ++    + P    YN +I  + K GN++EA+ +  EM
Sbjct: 621 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680

Query: 499 E 499
           E
Sbjct: 681 E 681



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 1/237 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++  LC++   D  + +   M   G  PN+ +    + +  +AGK   A  LL +  
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIP 506

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +   Y +L++ L K  +  EA+  F +   L   P+   +  LI G  +IG + 
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA     +M   G S D V Y +LI G  +  ++ +G   LK    ++    D+  YT  
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDL-QGAFALKAKMIETGLQLDLYCYTCF 625

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           ISG+C +  M +A G+ +EM   GI P    +N LI  + K+GNM  A  ++  M S
Sbjct: 626 ISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 211/414 (50%), Gaps = 4/414 (0%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N+++    + G + DS +++ D + S G   +S + +  VSS   AG+ D A  LL +
Sbjct: 389 TFNILVWGHYKYGRIEDSDRLLKDLIVS-GLFLDSSLYDVMVSSLCWAGRLDEAMKLLQE 447

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +T+S   +NSL+ A  +    D+A   ++   R    P + T N L+ GL R G 
Sbjct: 448 LLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGW 507

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A    Y M   G   + V Y  L+ G  ++N +     L KE+K +  + PD V +T
Sbjct: 508 LQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIY-PDAVAFT 566

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G  K G +++A  ++ EM++ G  P+   +N LI G    G +  A  + + M   
Sbjct: 567 ALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQK 626

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G L D  TF+ +IDG+CR GQ+   ++   +M+   L P+++TF ILI   CK   +  A
Sbjct: 627 GLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGA 686

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              + ++    L P    YN  + G+C+   +++A +I+ ++      PD VT+  ++ G
Sbjct: 687 GEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSG 746

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            C    +  A+ +  K+L++G  P+ IT N L+S   K GMP +A    Q+  E
Sbjct: 747 IC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLRE 799



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 194/392 (49%), Gaps = 1/392 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN +M    +        ++++ MR+ G  P+       V    + G+ + +  LL    
Sbjct: 355 YNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLI 414

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + + + +Y+ ++++L      DEA+ + +E            FN LI   SR G   
Sbjct: 415 VSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLED 474

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KAFE +  M   G +P   T N+L+ GLCR   +     LL  +  +  F  + V YT +
Sbjct: 475 KAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRM-LEKGFPINKVAYTVL 533

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GY K+  ++ A  ++ EM   GI P AV F  LIDG  K GN+  A  +   M + G+
Sbjct: 534 LDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGF 593

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P+   ++SLI G C  G++ + LKL  EM+ K L  + +TF I+I+  C+  ++  A  
Sbjct: 594 VPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIE 653

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               ++   L+P  F +N +I G+CKA ++  A  IV +M      PD  T+   + G+C
Sbjct: 654 TFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYC 713

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              +M +A+ I ++++  G  PD +T N+++S
Sbjct: 714 RMRKMNQAVIILDQLISAGIVPDTVTYNTMLS 745



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 182/395 (46%), Gaps = 7/395 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDY---MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           T+N+++ + C  G      V  D+   M   G  P+       + +  R G    A+ L 
Sbjct: 284 TFNILINACCIGG---RTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLF 340

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              +   +  +  +YN+L++   K     +A  +++E       PD  TFNIL+ G  + 
Sbjct: 341 DGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKY 400

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G ++ +     D+   G   D   Y+ ++S LC    +    +LL+E+  +   +  VV 
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQEL-LEKGLTLSVVA 459

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           + S+I  Y + G  DKA   Y  M  CG  PS+ T N L+ G  + G +  A  +  RML
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRML 519

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G+  + V ++ L+DGY +   L     L  EMK + + P+   FT LI+ L K   + 
Sbjct: 520 EKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVE 579

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A     ++     VP  F YN +I G C  G V EA  +  EM +K    D  TF I+I
Sbjct: 580 EAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIII 639

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            G C +G+M  AI  F  M RIG  PD  T N LI
Sbjct: 640 DGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILI 674



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 183/376 (48%), Gaps = 2/376 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  S   +N ++ +    GL D     +  M   G  P+S      +    R G    A+
Sbjct: 453 LTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEAR 512

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            LL +       ++   Y  LL+   K NN + A +++KE       PD   F  LI GL
Sbjct: 513 ILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGL 572

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           S+ G V++A+E F +M + G  P+   YN+LI GLC    V    +L KE++ K   S D
Sbjct: 573 SKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLS-D 631

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
             T+  +I G+C+ G+M  A   + +M   G+ P   TFN+LI G+ K  +MV A  +  
Sbjct: 632 TFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVN 691

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M S G  PD+ T+++ + GYCR  ++NQ + + D++    + P+  T+  +++ +C + 
Sbjct: 692 KMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD- 750

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L+ A     +L     +P     N ++  FCK G  ++A +   ++ E     D++++ 
Sbjct: 751 ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYR 810

Query: 512 ILIIGHCMKGRMVEAI 527
           IL   +C+    VE +
Sbjct: 811 ILDQAYCLMQDDVELV 826



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 166/341 (48%), Gaps = 1/341 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+LL   +      EA+ + +    +  +P   +  IL++ L RIG+    ++ F DM  
Sbjct: 181 NTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIF 240

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  P  +T+N +I G CR + V  G  LL  +  K   SPDVVT+  +I+  C  G+  
Sbjct: 241 KGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMP-KFMCSPDVVTFNILINACCIGGRTW 299

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A    + M   G++PS  TF  ++    + GN+V A  + + +   G  P+   +++L+
Sbjct: 300 VAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLM 359

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DGY +  ++ Q   L +EM+   +SP+  TF IL+    K  R+ D+ R LK L  + L 
Sbjct: 360 DGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLF 419

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
               +Y+ ++   C AG +DEA  ++ E+ EK      V F  LI  +   G   +A   
Sbjct: 420 LDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEA 479

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +  M+R G  P   T NSL+  L + G   EA  ++ R  E
Sbjct: 480 YRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE 520



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 1/276 (0%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D    NTL+ G   V       E+L+ ++      P + + T ++    ++G       +
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMR-GVGVRPGLSSITILLRLLLRIGDYGSVWKL 234

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           + +M   G +PS +TFN +I GF +   +V  E +   M  F   PDVVTF+ LI+  C 
Sbjct: 235 FKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCI 294

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G+    +     M    + P+V TFT +++ALC+E  + +AR+    ++   + P   +
Sbjct: 295 GGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAI 354

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN ++DG+ KA  V +A+++  EM      PD VTF IL+ GH   GR+ ++  +   ++
Sbjct: 355 YNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLI 414

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             G   D    + ++S L   G  +EA +++Q   E
Sbjct: 415 VSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLE 450


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 216/429 (50%), Gaps = 20/429 (4%)

Query: 104 LRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVM 163
           L + ++ +T   +LC++     + E++ ++++  +G   +              +YN VM
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV--------------SYNNVM 485

Query: 164 RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
              C     D  ++VF  +   G  PN+      +  C R      A  +++      + 
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545

Query: 224 MSTFMYNSLLNALVK---QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           ++  +Y +++N L K    + A E +    E  RL       ++N +I G  + GE+  A
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS--CMSYNSIIDGFFKEGEMDSA 603

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
              + +M   G SP+++TY +L++GLC+ N + +  E+  E+K K     D+  Y ++I 
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG-VKLDIPAYGALID 662

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G+CK   M+ A+ +++E+   G+ PS   +N LI GF  +GNMV+A  + ++ML  G   
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D+ T+++LIDG  ++G L    +L  EM+   L P+   +T+++N L K+ +     +  
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           +++K N++ P   +YN VI G  + GN+DEA  +  EM +K   PD  TF IL+ G    
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842

Query: 521 GRMVEAISI 529
            + V A S+
Sbjct: 843 LQPVRAASL 851



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 192/393 (48%), Gaps = 1/393 (0%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           H+    +FD     G L N  +    +S   + GK D A  LLS+     +  +   YN+
Sbjct: 425 HEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           ++    +Q N D A  +F        +P+ +T++ILI G  R  + + A E    M S  
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
              + V Y T+I+GLC+V + ++  ELL  +  +       ++Y S+I G+ K G+MD A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
              Y EM   GI P+ +T+  L++G  K   M  A  MR+ M + G   D+  + +LIDG
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           +C+   +     L  E+  + L+P+   +  LI+       +  A    K++  + L   
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              Y  +IDG  K GN+  A+ +  EM+     PD++ +T+++ G   KG+ V+ + +F 
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           +M +    P+ +  N++I+   + G  +EAFR+
Sbjct: 784 EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 178/368 (48%), Gaps = 3/368 (0%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           +P+       + + ++ G  D A  L  +     ++M+     SL+    K N+   A+ 
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +F +  +    P++ TF++LI+   + GE++KA EF+  M   G +P +   +T+I G  
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  +     +L  E  F++  + +V    +++S  CK GK D+AT + ++M S GI P+ 
Sbjct: 421 KGQKHEEALKLFDE-SFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V++N ++ G  +  NM  A  +   +L  G  P+  T+S LIDG  RN      L++ + 
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAG 486
           M   N+  N   +  +IN LCK  + + AR  L  + +   L      YN +IDGF K G
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +D A     EM      P+ +T+T L+ G C   RM +A+ + ++M   G   D     
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658

Query: 547 SLISCLLK 554
           +LI    K
Sbjct: 659 ALIDGFCK 666



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 185/375 (49%), Gaps = 1/375 (0%)

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
           V  + D  +S G   NS    + +++  +  + D A  +++Q    +V       N  L+
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           ALV++N+  EA  ++     +    D  T  +L++   R  +  +A E        G  P
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D + Y+  +   C+  ++A  + LL+E+K K    P   TYTSVI    K G MD A  +
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            +EM S GI  + V    LI G  K  ++VSA  + ++M   G  P+ VTFS LI+ + +
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           NG++ + L+   +M+   L+P+V+    +I    K  +  +A +   +  +   +   F+
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFV 445

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
            N ++   CK G  DEA  ++++ME +   P+ V++  +++GHC +  M  A  +F+ +L
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505

Query: 535 RIGCAPDDITVNSLI 549
             G  P++ T + LI
Sbjct: 506 EKGLKPNNYTYSILI 520


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 210/432 (48%), Gaps = 6/432 (1%)

Query: 141 KFLEFSRV--NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           K  E+ R+     +N +  TY  ++    +    D+   V+  M  +G   N  +++  V
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           +   + GK + A  L        +++    Y +L++ L K  +   A    +E       
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD   +N+ I  L  +G+ K+A  F  +M + G  PD  TYNT+I   CR  E A+  +L
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E+K  S   P+++TY ++++G    G ++KA  + NEM S G  PS++T   ++    
Sbjct: 612 LHEMKM-SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           +   +     + E M++ G   D+  +++L+   C +G   +   + +EM G  ++P+  
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTI 730

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TF  LI   CK + L++A     Q+   ++ P    +N ++ G    G + EA  ++ EM
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           E+   +P+ +T+ IL  GH  +   VEA+ ++ +M+  G  P   T N+LIS   K GM 
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 559 NEA---FRIMQR 567
            +A   F+ MQ+
Sbjct: 851 TQAKELFKDMQK 862



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 36/438 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C  G  D+ + V D M+  G  PN      F+    R    + A  L     
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V +     ++L+  L +     EA  +F+E  ++ + P+  T+  LI  L++ G  K
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326

Query: 279 KAFEFFYDMGSFGC-----------------------------------SPDIVTYNTLI 303
           +      +M S G                                    SP+ VTY  LI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             LC+ + V    ++L E++ KS  SP+VVT++SVI+G+ K G +DKAT     M   GI
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKS-ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ VT+  LIDGF K     +A  +   ML  G   +     SL++G  +NG++ + + 
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  +  G  LS +   +T LI+ L K   +  A +F ++L   +++P   +YN  I+  C
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLC 565

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             G   EA   + EM     KPD+ T+  +I+ HC KG   +A+ + ++M      P+ I
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 544 TVNSLISCLLKGGMPNEA 561
           T N+L++ L   G   +A
Sbjct: 626 TYNTLVAGLFGTGAVEKA 643



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 1/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + ++  LC  G       +F  M   G  PN       + S  +AG+      LL + 
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V M    Y +L++ L KQ   DE     +        P+  T+ +LI  L +   V
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M     SP++VT++++I+G  +   + +  E  + +K +   +P+VVTY +
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG-INPNVVTYGT 454

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ K    D A  +Y++M   G+K +    + L++G  + G +  A  + +     G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D V +++LIDG  + G +    K   E+  +N+ P+   + + IN LC   +  +A+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            FL +++   L P    YN +I   C+ G   +A  ++ EM+    KP+ +T+  L+ G 
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDIT 544
              G + +A  + N+M+  G +P  +T
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 171/380 (45%), Gaps = 45/380 (11%)

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  LL   RP     +T  YN LL AL    +A     +  E  +     D  T N L+ 
Sbjct: 92  AIALLRSSRP-----TTVAYNILLAALSDHAHAPA---VLAEMCKRGVPFDGVTVNTLLA 143

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL R G+V  A     D G    + D++ +NTLI+G CRV +      +   +  +    
Sbjct: 144 GLCRNGQVDAAAAL-ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG-LP 201

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            DVV Y ++++G+C+ G++D A G+ + M   G+ P+  T+   I  + +   +  A  +
Sbjct: 202 MDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDL 261

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E M+  G L DVVT S+L+ G CR+G+ ++   L  EM     +PN  T+  LI++L K
Sbjct: 262 YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321

Query: 450 ENR----------------LNDARRFLKQLKW-------------------NDLVPKPFM 474
             R                + D   +   + W                   ++L P    
Sbjct: 322 AGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVT 381

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y  +ID  CKA NVDEA  ++ EMEEK   P+ VTF+ +I G   +G + +A      M 
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441

Query: 535 RIGCAPDDITVNSLISCLLK 554
             G  P+ +T  +LI    K
Sbjct: 442 ERGINPNVVTYGTLIDGFFK 461



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 183/410 (44%), Gaps = 4/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDG-HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T N ++  LC  G  D+   + D  R  G H  +       ++   R G   AA  +  +
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADR 194

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + M    YN+L+    +    D A  +          P+  T+   I    R   
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V++AF+ +  M   G   D+VT + L++GLCR    +  + L +E+  K   +P+ VTY 
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD-KVGAAPNHVTYC 313

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I    K G+  +   +  EM S G+    VT+  L+D  GK G     +      LS 
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+ VT++ LID  C+   +++  ++  EM+ K++SPNV TF+ +IN   K   L+ A
Sbjct: 374 NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             + + +K   + P    Y  +IDGF K    D A  +  +M  +  K +K     L+ G
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG 493

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               G++ EA+++F      G + D +   +LI  L K G    AF+  Q
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQ 543



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 13/430 (3%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  +V  + NH   TY  ++ SL + G    +  +   M S G + +       +   
Sbjct: 297 FREMDKVGAAPNHV--TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + GK D  K  L       ++ +   Y  L++AL K +N DEA  +  E       P+ 
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN----EVARGHE 317
            TF+ +I G  + G + KA E+   M   G +P++VTY TLI G  +       +   H+
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +L E    ++F  D     S+++G  + GK+++A  ++ + +  G+    V +  LIDG 
Sbjct: 475 MLCEGVKVNKFIVD-----SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G+M +A    + ++    LPD V ++  I+  C  G+  +      EM+   L P+ 
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ 589

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  +I + C++     A + L ++K + + P    YN ++ G    G V++A  ++ E
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE 649

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAI-SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           M      P  +T    ++  C + R ++ I  I   M+  G   D    N+L+  L   G
Sbjct: 650 MVSAGFSPSSLTHR-RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHG 708

Query: 557 MPNEAFRIMQ 566
           M  +A  +++
Sbjct: 709 MTRKATVVLE 718



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 156/332 (46%), Gaps = 7/332 (2%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           LP++ +   F++     GK   AK  L++ R   +      YN+++ +  ++    +A+ 
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +  E      +P+  T+N L+ GL   G V+KA     +M S G SP  +T+  ++    
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 308 ---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
              R++ +   HE +      +    D+  Y +++   C  G   KAT +  EM   GI 
Sbjct: 671 QSRRLDVILDIHEWM----MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  +TFN LI G  K  ++ +A     +ML     P++ TF++L+ G    G++ +   +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             EM+   L PN  T+ IL     K++   +A R   ++     VPK   YN +I  F K
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           AG + +A  +  +M+++   P   T+ IL+ G
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 1/324 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+ +  LC +G     +     MR+ G  P+       + S  R G+   A  LL + +
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +   YN+L+  L      ++A Y+  E       P + T   ++Q  S+   + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              +    M + G   DI  YNTL+  LC      +   +L+E+   S  +PD +T+ ++
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM-LGSGIAPDTITFNAL 735

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK   +D A   Y +M    I P+  TFN L+ G   VG +  A  +   M   G 
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+ +T+  L  G+ +     + ++L  EM GK   P V T+  LI+   K   +  A+ 
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKE 855

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGF 482
             K ++   + P    Y+ ++ G+
Sbjct: 856 LFKDMQKRGVHPTSCTYDILVSGW 879


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 198/408 (48%), Gaps = 2/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+V+ SLC  G     + +   M+ +  LPN+      ++  ++ G+C +A  +L   
Sbjct: 232 TCNIVLNSLCTQGKLSKAESMLQKMK-NCRLPNAVTYNTILNWYVKKGRCKSALRILDDM 290

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + YN +++ L K   +  A  + K    +   PD  ++N LI G    G++
Sbjct: 291 EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKI 350

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  M      P + TY  LI G CR         +L E++  +   P  +TY++
Sbjct: 351 NLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI-TGVRPSELTYSA 409

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYCK  K+  A  +   + S  I  +   + +LIDGF ++G +  A+ + + ML+ G
Sbjct: 410 LLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADG 469

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV+T+S+LI+G C+ G +++  ++   M+   + PN   +T L+   CK     +A 
Sbjct: 470 IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEAL 529

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           ++   +  + LV    ++N ++  F + G + EA      M   +   D  +F  +I  +
Sbjct: 530 KYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSY 589

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +G ++EA S+++ M+R G  PD  T  SL+  L +GG   +A   M
Sbjct: 590 CQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 18/429 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQ 216
           TY+ ++  +C+MG+    + +   M+  G LPN+ +    V    +AG   +A K  +  
Sbjct: 476 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI 535

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIG 275
           +R G V  ++ ++N+LL +  ++    EA   FK+Y  R+    D  +FN +I    + G
Sbjct: 536 YRSGLVA-NSVIHNALLCSFYREGMIAEA-EQFKQYMSRMKISFDVASFNCIIDSYCQRG 593

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V +AF  + +M   G  PDI TY +L+ GLC+   + +  E +  +  +   + D  T 
Sbjct: 594 NVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL-LEKACAIDEKTL 652

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ G CK G +D+A  +  +M +  I P   T+ +L+DGF K G +V A  + + ML 
Sbjct: 653 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 712

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN-LSPNVYTFTILINALCKENRLN 454
            G +PD + ++ L++G    GQ+     +  E+  K  L  +   +  ++N   K  ++N
Sbjct: 713 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 772

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +  R ++ +  N++ P    YN ++ G+ K G +     +  +M ++  KPD VT+ +LI
Sbjct: 773 EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 832

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G C  G +  A+    KM+  G  PD++  + LI          +AF   +++     L
Sbjct: 833 FGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILI----------KAFS--EKSKMSNAL 880

Query: 575 QLPSWKKAV 583
           QL S+ K V
Sbjct: 881 QLFSYMKWV 889



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 196/410 (47%), Gaps = 3/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++      G  +    +F+ M      P+       +    R G+ D A+ +L + 
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM 395

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT-FNILIQGLSRIGE 276
           +   V  S   Y++LLN   K +    A+ + K Y R  S     T + ILI G  ++GE
Sbjct: 396 QITGVRPSELTYSALLNGYCKHSKLGPALDLIK-YLRSRSISINRTMYTILIDGFCQLGE 454

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V KA +    M + G  PD++TY+ LI+G+C++  +    E+L  ++ KS   P+ V YT
Sbjct: 455 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ-KSGVLPNNVLYT 513

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++  +CK G   +A   + ++   G+  ++V  N L+  F + G +  AE  ++ M   
Sbjct: 514 TLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 573

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
               DV +F+ +ID YC+ G + +   + D M      P++ T+  L+  LC+   L  A
Sbjct: 574 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 633

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           + F+  L            N ++ G CK G +DEA  +  +M  +   PD  T+TIL+ G
Sbjct: 634 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 693

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C +G++V A+ +   ML  G  PD I    L++ L+  G    A  + Q
Sbjct: 694 FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQ 743



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 175/340 (51%), Gaps = 2/340 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N +LN+L  Q    +A  M ++  +    P+  T+N ++    + G  K A     DM  
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQK-MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G   D+ TYN +I  LC++   AR + LLK ++ +   +PD  +Y ++I G+   GK++
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMR-EVNLTPDECSYNTLIHGFFGEGKIN 351

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  I+N+M    +KPS  T+  LIDG+ + G    A  +   M   G  P  +T+S+L+
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALL 411

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +GYC++ +L   L L   ++ +++S N   +TILI+  C+   ++ A++ LK +  + + 
Sbjct: 412 NGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGID 471

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y+ +I+G CK G + E   I++ M++    P+ V +T L+   C  G   EA+  
Sbjct: 472 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 531

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           F  + R G   + +  N+L+    + GM  EA +  Q  S
Sbjct: 532 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMS 571



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 183/372 (49%), Gaps = 6/372 (1%)

Query: 194 IEFFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           ++  V++ ++ GK  DAA  +      G    S F  N++LNALV  N ++      KE 
Sbjct: 163 VDLLVNAYVKEGKVLDAAAAIFFMDECG-FKASLFSCNNILNALVGINKSEYVWLFLKES 221

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS-PDIVTYNTLISGLCRVNE 311
                  D  T NI++  L   G++ KA      M +  C  P+ VTYNT+++   +   
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKN--CRLPNAVTYNTILNWYVKKGR 279

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
                 +L +++ K+    D+ TY  +I   CKL +  +A  +   M    + P   ++N
Sbjct: 280 CKSALRILDDME-KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYN 338

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            LI GF   G +  A Y+  +ML     P V T+++LIDGYCRNG+ ++  ++  EM+  
Sbjct: 339 TLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQIT 398

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
            + P+  T++ L+N  CK ++L  A   +K L+   +     MY  +IDGFC+ G V +A
Sbjct: 399 GVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKA 458

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             I+  M      PD +T++ LI G C  G + E   I ++M + G  P+++   +L+  
Sbjct: 459 KQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFY 518

Query: 552 LLKGGMPNEAFR 563
             K G   EA +
Sbjct: 519 FCKAGHAKEALK 530



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 193/424 (45%), Gaps = 18/424 (4%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
            SR+ +S +    ++N ++ S C+ G       V+D M   G  P+       +    + 
Sbjct: 570 MSRMKISFD--VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQG 627

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G    AK  +         +     N+LL  + K    DEA+ + ++       PDT+T+
Sbjct: 628 GHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTY 687

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            IL+ G  + G+V  A      M   G  PD + Y  L++GL    +V     + +E+  
Sbjct: 688 TILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIIC 747

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K     D + Y S+++GY K G++++   +   M+   + PS+ ++N+L+ G+ K G + 
Sbjct: 748 KEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLS 807

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
              Y+   M+  G  PD VT+  LI G C  G +   +K  ++M  + + P+   F ILI
Sbjct: 808 RTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILI 867

Query: 445 NALCKENRLNDARRFLKQLKW-----------NDL-----VPKPFMYNPVIDGFCKAGNV 488
            A  +++++++A +    +KW            D+     VP     + ++ G CK G V
Sbjct: 868 KAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKV 927

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           +EA ++ + +      P   TFT L+ G C + ++ +A  +   M   G   D +T N L
Sbjct: 928 EEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVL 987

Query: 549 ISCL 552
           I+ L
Sbjct: 988 ITGL 991



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 197/448 (43%), Gaps = 36/448 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G   S   + D M  +G   +       +    +  +   A  LL + 
Sbjct: 266 TYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +T     YN+L++    +   + A+Y+F +  R   +P   T+  LI G  R G  
Sbjct: 326 REVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT 385

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A    Y+M   G  P  +TY+ L++G C+ +++    +L+K ++ +S  S +   YT 
Sbjct: 386 DEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRS-ISINRTMYTI 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C+LG++ KA  I   M + GI P  +T++ LI+G  K+G +   + +  RM   G
Sbjct: 445 LIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 504

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLK--------------------LC------------ 425
            LP+ V +++L+  +C+ G   + LK                    LC            
Sbjct: 505 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 564

Query: 426 ---DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                M    +S +V +F  +I++ C+   + +A      +  +   P    Y  ++ G 
Sbjct: 565 QFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 624

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+ G++ +A   +  + EK C  D+ T   L++G C  G + EA+ +  KM+     PD 
Sbjct: 625 CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 684

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
            T   L+    K G    A  ++Q   E
Sbjct: 685 YTYTILLDGFCKRGKVVPALILLQMMLE 712



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 177/344 (51%), Gaps = 8/344 (2%)

Query: 227 FMYNSLLNALVKQN---NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           F  + L+NA VK+    +A  A++   E      +   ++ N ++  L  I + +  + F
Sbjct: 161 FSVDLLVNAYVKEGKVLDAAAAIFFMDE---CGFKASLFSCNNILNALVGINKSEYVWLF 217

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
             +        D+ T N +++ LC   ++++   +L+  K K+   P+ VTY ++++ Y 
Sbjct: 218 LKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQ--KMKNCRLPNAVTYNTILNWYV 275

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G+   A  I ++M   GI+    T+N++ID   K+     A  + +RM      PD  
Sbjct: 276 KKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDEC 335

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           ++++LI G+   G++N  + + ++M  ++L P+V T+T LI+  C+  R ++ARR L ++
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM 395

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +   + P    Y+ +++G+CK   +  A  ++  +  +    ++  +TILI G C  G +
Sbjct: 396 QITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEV 455

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +A  I   ML  G  PD IT ++LI+ + K GM +E   I+ R
Sbjct: 456 SKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSR 499



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 193/443 (43%), Gaps = 59/443 (13%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            KT N ++  +C+ G  D    + + M +   LP++      +    + GK   A  LL  
Sbjct: 650  KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQM 709

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF---RLYSQPDTWTFNILIQGLSR 273
                 +   T  Y  LLN LV +     A YMF+E      LY+  D   +N ++ G  +
Sbjct: 710  MLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYA--DCIAYNSMMNGYLK 767

Query: 274  IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             G++ +      +M      P   +YN L+ G  +  +++R   L +++  K    PD V
Sbjct: 768  GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM-VKEGIKPDNV 826

Query: 334  TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK-------------- 379
            TY  +I G C+ G ++ A     +M   G+ P  + F++LI  F +              
Sbjct: 827  TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 886

Query: 380  --VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
              VG++  A  ++E M + G +P  V  SS++ G C+ G++ + + +   +    + P +
Sbjct: 887  KWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI 946

Query: 438  YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
             TFT L++ LCKE +++DA   LKQL                                  
Sbjct: 947  ATFTTLMHGLCKEFKIDDAFH-LKQL---------------------------------- 971

Query: 498  MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
            ME    K D VT+ +LI G C K  + +A+ ++ +M   G  P+  T  +L   +   G 
Sbjct: 972  MESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGT 1031

Query: 558  PNEAFRIMQRASEDQNLQLPSWK 580
              +  ++++   ED+ + +PS+K
Sbjct: 1032 MQDGEKLLKDI-EDRGI-VPSYK 1052



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 3/164 (1%)

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           L++ Y + G++         M       ++++   ++NAL   N+      FLK+     
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK-PDKVTFTILIIGHCMKGRMVEA 526
                   N V++  C  G + +A  ++ +M  K C+ P+ VT+  ++  +  KGR   A
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSA 283

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + I + M + G   D  T N +I  L K      A+ +++R  E
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMRE 327


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 203/417 (48%), Gaps = 6/417 (1%)

Query: 155 SFKTYNLVMRSLCEMGLH-DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           SF++YN+V+  L     H D++ +    +  D   P +        +  R G+ + A  L
Sbjct: 138 SFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALAL 197

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L             +Y ++++AL  Q    EA  +  E   +    D  TF+ +++G+  
Sbjct: 198 LRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCG 257

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G V++A      M + GC P ++TY  L+ GLCRV +      +L  V        +VV
Sbjct: 258 LGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP-----ELNVV 312

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            + +VI G    GK+ +AT +Y  M   G +P A T+++L+ G  K+G + SA  +   M
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G+ P+VVT++ ++  +C+NG  +    L +EM  K L+ N   +  +I ALCK+ R+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A   +++++     P    YN +I   C    ++EA  +   + E+    + +T+  +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           I      GR  +A+ +  +M+  GC+ D ++ N LI  + K G  + +  +++  +E
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 198/411 (48%), Gaps = 5/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ V+R +C +G       + D M + G +P      F +    R  + D A+ +L + 
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++  ++N+++   + +    EA  +++       QPD  T++IL+ GL ++G +
Sbjct: 307 P----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M   G +P++VTY  ++   C+         LL+E+  K   + +   Y  
Sbjct: 363 SSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG-LTLNSQGYNG 421

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G+MD+A G+  EM S G  P   ++N +I        M  AE+M E +L  G
Sbjct: 422 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 481

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + + +T++++I    R+G+    ++L  EM     S +V ++  LI A+CK+  ++ + 
Sbjct: 482 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 541

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L+++    + P    YN +I   CK   V +A  +  +M  +   PD VT+  LI G 
Sbjct: 542 VLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           C  G M  A+++  K+      PD IT N LIS   K  + ++A  ++ RA
Sbjct: 602 CKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRA 652



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 10/346 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           YN +L+ L + +   +A+ +++    R    P T+TF +  + L R+G   +A      M
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGM 201

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              GC PD V Y T+I  LC    V     LL E+      + DV T+  V+ G C LG+
Sbjct: 202 ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG-CAADVNTFDDVVRGMCGLGR 260

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD--VVTF 405
           + +A  + + M + G  P  +T+  L+ G  +V     A  M       G +P+  VV F
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM------LGRVPELNVVLF 314

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           +++I G    G+L +  +L + M  K   P+ +T++IL++ LCK  R++ A R L++++ 
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK 374

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    Y  V+  FCK G  D+   ++ EM  K    +   +  +I   C  GRM E
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           A+ +  +M   GC PD  + N++I  L       EA  + +   E+
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 1/204 (0%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N    +YN ++  LC     +  + +F+ +  +G + N       + + +R G+   A  
Sbjct: 448 NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVR 507

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L  +      ++    YN L+ A+ K  N D ++ + +E      +P+  ++NILI  L 
Sbjct: 508 LAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELC 567

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +   V+ A E    M + G +PDIVTYNTLI+GLC++  +     LL+++       PD+
Sbjct: 568 KERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH-NENVHPDI 626

Query: 333 VTYTSVISGYCKLGKMDKATGIYN 356
           +TY  +IS +CK+  +D A  + N
Sbjct: 627 ITYNILISWHCKVRLLDDAAMLLN 650


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 200/402 (49%), Gaps = 13/402 (3%)

Query: 161  LVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
            +++R LC E  + + ++++ +     G +P+       +    R G  D  +GLL     
Sbjct: 1152 VLVRGLCLERRVEEGLKLI-EARWGAGCIPHVVFYNVLIDGYCRRG--DMGRGLLLL--- 1205

Query: 220  GEVTMSTFM-----YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            GE+    F+     Y SL+N L K+ + ++   +F E  +    P+   +N +I  L + 
Sbjct: 1206 GEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKC 1265

Query: 275  GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
                +A      M + GC PDI+T+NTLI+GLC    V +    L+E   + E +P+ ++
Sbjct: 1266 RSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA-IRRELNPNQLS 1324

Query: 335  YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            YT +I G+C  G++  A+ +  EM   G  P  VTF  LI G    G +  A  +RE+M 
Sbjct: 1325 YTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 1384

Query: 395  SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 PDV  ++ LI G C+   L     + +EM  KN+ P+ + +  LI+   +   L 
Sbjct: 1385 ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1444

Query: 455  DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            DAR+  + ++   + P     N +I G+C+ G + EA + ++ M +  C PD+ T+T +I
Sbjct: 1445 DARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1504

Query: 515  IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
             G+  +G +  A+     M++  C P+ +T +SLI+   K G
Sbjct: 1505 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTG 1546



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 204/407 (50%), Gaps = 3/407 (0%)

Query: 160  NLVMRSLCEMGLHDSVQVVFDYMRS-DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            N +++ L E    D  + ++D M   D    N          C+     +  K + +++ 
Sbjct: 1116 NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1175

Query: 219  PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             G +    F YN L++   ++ +    + +  E       P   T+  LI  L + G+++
Sbjct: 1176 AGCIPHVVF-YNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLE 1234

Query: 279  KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            K    F +M   G SP++  YN++I  LC+     +   +LK++ F S   PD++T+ ++
Sbjct: 1235 KIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM-FASGCDPDIITFNTL 1293

Query: 339  ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
            I+G C  G + KA     E     + P+ +++  LI GF   G ++ A  +   M+  G+
Sbjct: 1294 ITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGH 1353

Query: 399  LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             PDVVTF +LI G    G++++ L + ++M  + + P+V  + +LI+ LCK+  L  A+ 
Sbjct: 1354 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKN 1413

Query: 459  FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             L+++   ++ P  F+Y  +IDGF ++ N+ +A  I   ME K   PD V+   +I G+C
Sbjct: 1414 ILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYC 1473

Query: 519  MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              G M EAI   + M ++GC PD+ T  ++IS   K G  N A R +
Sbjct: 1474 QFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 1520



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 206/452 (45%), Gaps = 41/452 (9%)

Query: 139  GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            GLK +E +R           YN+++   C  G      ++   M + G LP        +
Sbjct: 1166 GLKLIE-ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLI 1224

Query: 199  SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
            +   + G  +    L  + R    + +  +YNS+++AL K  +A +A+ + K+ F     
Sbjct: 1225 NWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCD 1284

Query: 259  PDTWTFNILIQGLSRIGEVKKAFEFF---------------------------------- 284
            PD  TFN LI GL   G V+KA  F                                   
Sbjct: 1285 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1344

Query: 285  -YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              +M   G +PD+VT+  LI GL    +V+    +++E   + +  PDV  Y  +ISG C
Sbjct: 1345 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEA-LIVREKMTERQVFPDVNIYNVLISGLC 1403

Query: 344  KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
            K   +  A  I  EM    ++P    +  LIDGF +  N+  A  + E M   G  PD+V
Sbjct: 1404 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIV 1463

Query: 404  TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            + +++I GYC+ G +++ +     M+     P+ +T+T +I+   K+  LN A R+L  +
Sbjct: 1464 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 1523

Query: 464  KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                  P    Y+ +I+G+CK G+ D A  + A M+ +   P+ VT+TILI     K ++
Sbjct: 1524 IKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 1583

Query: 524  VEAISIFNKMLRIGCAPDDIT----VNSLISC 551
            + A   F  ML   C+P+D+T    VN L SC
Sbjct: 1584 LRAGLYFETMLLNHCSPNDVTLHYLVNGLTSC 1615



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 212/467 (45%), Gaps = 16/467 (3%)

Query: 112  TCARYLCEKL-SPLNSLEV---IKRLDNPKLGLKFLEFSRVNLSLNHSFK-------TYN 160
            T AR L   L SPL+   +   +  L +P L +  L +S+   S +H           ++
Sbjct: 989  TWARSLAALLPSPLSDAHLAAAVSSLPDPDLAVALLSWSQ---SPDHHVALQDPTPLAHS 1045

Query: 161  LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
             ++R L      D+V      M   G  P    +   V++   AG    A  +  + R  
Sbjct: 1046 ALLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQ 1105

Query: 221  EVTMSTFMY-NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
              ++    + N LL  LV+Q   D+A  ++ E     S  D ++  +L++GL     V++
Sbjct: 1106 YGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEE 1165

Query: 280  AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
              +        GC P +V YN LI G CR  ++ RG  LL E++ K  F P +VTY S+I
Sbjct: 1166 GLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKG-FLPTLVTYGSLI 1224

Query: 340  SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            +   K G ++K   ++ EM   G  P+   +N +ID   K  +   A  + ++M + G  
Sbjct: 1225 NWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCD 1284

Query: 400  PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            PD++TF++LI G C  G + +      E   + L+PN  ++T LI+  C    L  A   
Sbjct: 1285 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1344

Query: 460  LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            L ++      P    +  +I G   AG V EA ++  +M E++  PD   + +LI G C 
Sbjct: 1345 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1404

Query: 520  KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            K  +  A +I  +ML     PD+    +LI   ++     +A +I +
Sbjct: 1405 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1451



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 193/468 (41%), Gaps = 51/468 (10%)

Query: 131  KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
            K+ D  K+G  FLE  +   S N   + YN V+ +LC+        V+   M + G  P+
Sbjct: 1229 KKGDLEKIGSLFLEMRKRGFSPN--VQIYNSVIDALCKCRSATQAMVILKQMFASGCDPD 1286

Query: 191  SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                   ++     G    A+  L +    E+  +   Y  L++    +     A  +  
Sbjct: 1287 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLV 1346

Query: 251  EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
            E       PD  TF  LI GL   G+V +A      M      PD+  YN LISGLC+  
Sbjct: 1347 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKR 1406

Query: 311  EVARGHELLKEVKFKS----------------------------EF------SPDVVTYT 336
             +     +L+E+  K+                            EF       PD+V+  
Sbjct: 1407 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCN 1466

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++I GYC+ G M +A    + M   G  P   T+  +I G+ K GN+  A      M+  
Sbjct: 1467 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 1526

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
               P+VVT+SSLI+GYC+ G  +    L   M+ + LSPNV T+TILI +L K++++  A
Sbjct: 1527 KCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 1586

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGF------------CKAGNV---DEANVIVAEMEEK 501
              + + +  N   P     + +++G             C    V   D   V+  ++   
Sbjct: 1587 GLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFD 1646

Query: 502  RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
               P    +  +I   C    + EA+   N+M + G  P+ IT  SL+
Sbjct: 1647 IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 1694



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 160/360 (44%), Gaps = 17/360 (4%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            T+  ++  L   G      +V + M      P+  +    +S   +     AAK +L + 
Sbjct: 1359 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1418

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                V    F+Y +L++  ++  N  +A  +F+        PD  + N +I+G  + G +
Sbjct: 1419 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMM 1478

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             +A     +M   GC PD  TY T+ISG  +   +      L ++  K +  P+VVTY+S
Sbjct: 1479 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM-IKRKCKPNVVTYSS 1537

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I+GYCK G  D A G++  M +  + P+ VT+ +LI    K   ++ A    E ML   
Sbjct: 1538 LINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1597

Query: 398  YLPDVVTFSSLIDGY--CRNGQLNQGLKLCDEMKGKNL-------------SPNVYTFTI 442
              P+ VT   L++G   C    +N       E+ GK+               P    +  
Sbjct: 1598 CSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNA 1657

Query: 443  LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG-NVDEANVIVAEMEEK 501
            +I +LC+ N L +A  F  ++     VP P  +  ++ GFC  G +V+   ++  E +++
Sbjct: 1658 IIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQE 1717



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 349  DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSS 407
            D        M+  G  P+      L+  +   G +  A  M ER+   +G LP+V   + 
Sbjct: 1058 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNR 1117

Query: 408  LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
            L+       + +   KL DEM GK+   + Y+  +L+  LC E R+ +  + ++      
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1177

Query: 468  LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             +P    YN +IDG+C+ G++    +++ EME K   P  VT+  LI     KG + +  
Sbjct: 1178 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIG 1237

Query: 528  SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            S+F +M + G +P+    NS+I  L K     +A  I+++
Sbjct: 1238 SLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQ 1277



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 15/186 (8%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA-----KG 212
            TY+ ++   C+ G  D  + +F  M+++   PN       + S  +  K   A       
Sbjct: 1534 TYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETM 1593

Query: 213  LLSQFRPGEVTMSTFM----------YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
            LL+   P +VT+   +           NS+     + +  D  + +FK+       P   
Sbjct: 1594 LLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNS 1653

Query: 263  TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
             +N +I  L R   +++A +F   M   G  P+ +T+ +L+ G C V +      +L   
Sbjct: 1654 AYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNE 1713

Query: 323  KFKSEF 328
              + EF
Sbjct: 1714 FQQEEF 1719


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 186/369 (50%), Gaps = 1/369 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  +  S  +YN ++   C+ G  D    +   +   G  PN+      +    + G  
Sbjct: 456 VSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDS 515

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  +  Q     +  +   +N+++N L K     E       + +      + T+N +
Sbjct: 516 ERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSI 575

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  + G V  A   + +M   G SPD++TY +LI GLC+ N++    E+  ++K+K  
Sbjct: 576 IDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG- 634

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              DVV Y+++I G+CK+  M+ A+  + E+   G+ P+ V +N +I GF  + NM +A 
Sbjct: 635 MKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAAL 694

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M+      D+  ++S+I G  + G+L+  L L  EM  K++ P++  +T+LIN L
Sbjct: 695 NLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGL 754

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
               +L +A + LK++  N++ P   +YN +I G  + GN+ EA  +  EM +K   PD 
Sbjct: 755 SNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDD 814

Query: 508 VTFTILIIG 516
            T+ IL+ G
Sbjct: 815 TTYDILVNG 823



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 202/395 (51%), Gaps = 2/395 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +M+  C +G  +    +FD +   G +P+  +    ++ C + G  + A  L ++ +   
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMG 390

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +  + F+ NSLL    +QN  + A  +F E    +   +  T+NIL++ L  +G+V +A 
Sbjct: 391 IQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVE-HGITNVVTYNILLKWLGELGKVNEAC 449

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
             +  M S G +P +V+YN LI G C+   + + + +LK +  +    P+ VTYT +I G
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI-LERGLKPNAVTYTLLIDG 508

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           + K G  ++A  ++ +M +  I P+  TFN +I+G GK G +   +      +  G++  
Sbjct: 509 FFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVST 568

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            +T++S+IDG+ + G ++  L    EM    +SP+V T+T LI+ LCK N++  A     
Sbjct: 569 SITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHS 628

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +K+  +      Y+ +IDGFCK  +++ A+    E+ +    P+ V +  +I G     
Sbjct: 629 DMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLN 688

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  A+++  +M++     D     S+I  LLK G
Sbjct: 689 NMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEG 723



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 195/397 (49%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++++ L E+G  +    +++ M S G  P+       +    + G  D A  +L   
Sbjct: 431 TYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y  L++   K+ +++ A  +F++       P   TFN +I GL + G V
Sbjct: 491 LERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRV 550

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +  +   +    G     +TYN++I G  +   V       +E+  +S  SPDV+TYTS
Sbjct: 551 SETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREM-CESGISPDVITYTS 609

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  K+  A  ++++M   G+K   V ++ LIDGF K+ +M SA      +L  G
Sbjct: 610 LIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIG 669

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V ++S+I G+     +   L L  EM    +  ++  +T +I  L KE +L+ A 
Sbjct: 670 LTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLAL 729

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++   D+VP   MY  +I+G    G ++ A+ I+ EM+     P  + + ILI G+
Sbjct: 730 DLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGN 789

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +G + EA  + ++ML  G  PDD T + L++  LK
Sbjct: 790 FREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLK 826



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 199/398 (50%), Gaps = 4/398 (1%)

Query: 158 TYNLVMRSLCE-MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            Y+++++++C  + L+ + +++ + MR  G +P+       + +C++ G    A  L  +
Sbjct: 257 AYSILVQAVCRRLDLNLACELLKE-MREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDE 315

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + M+  +  SL+       + + A+ +F E       PD   F++LI G S++G+
Sbjct: 316 MVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGD 375

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           ++KA+E +  M   G  P++   N+L+ G    N +   + L  E         +VVTY 
Sbjct: 376 MEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEA--VEHGITNVVTYN 433

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++    +LGK+++A  ++ +M S GI PS V++N LI G  K G M  A  M + +L  
Sbjct: 434 ILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILER 493

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+ VT++ LIDG+ + G   +   + ++M   N++P  +TF  +IN L K  R+++ 
Sbjct: 494 GLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSET 553

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +  L        V     YN +IDGF K G VD A +   EM E    PD +T+T LI G
Sbjct: 554 QDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDG 613

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            C   ++  A+ + + M   G   D +  ++LI    K
Sbjct: 614 LCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCK 651



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 181/384 (47%), Gaps = 6/384 (1%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G   +S +  + + S +R  K   A          ++     + N+LL A+V++N   +A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             ++ E        D +T +++++   + G+ ++  +FF +    G   D   Y+ L+  
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264

Query: 306 LCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           +CR  ++    ELLKE++   EF   P   TYT+VI    K G   +A  + +EM S G+
Sbjct: 265 VCRRLDLNLACELLKEMR---EFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGL 321

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
             + +    L+ G+  +G++  A  + + ++  G +PDVV FS LI+G  + G + +  +
Sbjct: 322 PMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYE 381

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L   MK   + PNV+    L+    ++N L  A     +   +  +     YN ++    
Sbjct: 382 LYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLG 440

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           + G V+EA  +  +M  K   P  V++  LI+GHC KG M +A S+   +L  G  P+ +
Sbjct: 441 ELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAV 500

Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
           T   LI    K G    AF + ++
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQ 524



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 108/251 (43%)

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           E L E   +  F  D   +  ++  + ++ K+  A   +  M    + P     N L+  
Sbjct: 135 ECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTA 194

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             +   +  A  + + M+  G   D  T   ++    + G+  +  K   E KG+ L  +
Sbjct: 195 MVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVD 254

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
              ++IL+ A+C+   LN A   LK+++    VP    Y  VI    K GN  EA  +  
Sbjct: 255 AAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKD 314

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM       + +    L+ G+C+ G +  A+ +F++++  G  PD +  + LI+   K G
Sbjct: 315 EMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVG 374

Query: 557 MPNEAFRIMQR 567
              +A+ +  R
Sbjct: 375 DMEKAYELYTR 385



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 94/209 (44%)

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G +  +  FN L+  F +V  +  A      ML    +P V   ++L+    R   +   
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +L DEM  + +  + YT  +++ A  KE +  +  +F K+ K   L      Y+ ++  
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            C+  +++ A  ++ EM E    P K T+T +I+    +G  VEA+ + ++M+ +G   +
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
            I   SL+      G  N A ++     E
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVVE 353



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +   ++ GK   A  L S+    ++     MY  L+N L      + A  + KE      
Sbjct: 716 IGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNI 775

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
            P    +NILI G  R G +++AF    +M   G  PD  TY+ L++G  +V+    G
Sbjct: 776 TPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHTLGG 833


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 185/358 (51%), Gaps = 4/358 (1%)

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           Y  ++  LC++G   D++Q+ F  M+     PN  M    +    + G  D A GL ++ 
Sbjct: 178 YGTIINGLCKIGKTRDAIQM-FPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEM 236

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGE 276
               + +  + YNS+++          AV +  E   R    PD +TFNILI GL ++G 
Sbjct: 237 VENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGR 296

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A+     M   G  PDIV+YN L++G C    V    ++  ++  ++   P+V++Y 
Sbjct: 297 VSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTAL-PNVISYC 355

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I+GYCK+  +D+A  +  EM++  + P  VT+N L+DG  K G  +    + E M + 
Sbjct: 356 TLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRAS 415

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G   D++T++ L+D Y ++ + ++ L L   +    +SPN+ T+ IL++ LCK  RL  A
Sbjct: 416 GQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYA 475

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +   + L      P    YN +I G CK G +DEA  ++ +M      P+ +TF  ++
Sbjct: 476 KEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 187/374 (50%), Gaps = 1/374 (0%)

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           C++ G+   A  LL ++           Y +++N L K     +A+ MF +  ++   P+
Sbjct: 151 CLK-GRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPN 209

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
              +N +I GL + G V +A     +M   G   D+ +YN++I G C V       +LL 
Sbjct: 210 LIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLD 269

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+  + +  PDV T+  +I G CKLG++ +A  +   M   G KP  V++N L++G+   
Sbjct: 270 EMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLS 329

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G++  A+ + ++M+    LP+V+++ +LI+GYC+   +++ + L  EM  KNL P+  T+
Sbjct: 330 GSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTY 389

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             L++ L K  R       ++ ++ +        YN ++D + K    D+A  +   + E
Sbjct: 390 NCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIE 449

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
               P+  T+ IL+ G C  GR+  A  IF  +   GC P+  T N +I  L K G  +E
Sbjct: 450 IGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDE 509

Query: 561 AFRIMQRASEDQNL 574
           A  ++ +   +  L
Sbjct: 510 AEALLYKMVNNNYL 523



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 182/377 (48%), Gaps = 5/377 (1%)

Query: 197 FVSSCIRAGKCDAAKGLLS--QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
            +S+ I+  + +A   L +  Q +P  +  S   ++ L+NA  +      A  +     +
Sbjct: 75  LLSTLIKLKRYNAVVSLYTILQSKP-TIKPSLITFSILINAFAQLGQMGFAFSLLGNILK 133

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           +  Q D      L++GL   G V +A    ++    G   D V Y T+I+GLC++ +   
Sbjct: 134 MGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRD 193

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             ++  ++K K    P+++ Y +VI G CK G +D+A G+  EM   GI+    ++N +I
Sbjct: 194 AIQMFPKMK-KIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            GF  VG   +A  + + M+  G + PDV TF+ LIDG C+ G++++   +   M  +  
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW 312

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P++ ++  L+N  C    + +A++   ++     +P    Y  +I+G+CK   VDEA V
Sbjct: 313 KPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMV 372

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ EM  K   PD VT+  L+ G    GR +    +   M   G   D IT N L+    
Sbjct: 373 LLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYF 432

Query: 554 KGGMPNEAFRIMQRASE 570
           K    ++A  + Q   E
Sbjct: 433 KHEKFDKALALFQHIIE 449



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 2/233 (0%)

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNS-CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           +  ++S   KL + +    +Y  + S   IKPS +TF++LI+ F ++G M  A  +   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           L  G+  DV   ++L+ G C  G++ + + L  E   +    +   +  +IN LCK  + 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA +   ++K   + P   MYN VIDG CK G VDEA  +  EM E   + D  ++  +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 514 IIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I G C  GR   A+ + ++M+  G   PD  T N LI  L K G  +EA+ ++
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVV 304



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 1/252 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++  LC++G       V   M   G  P+       ++    +G    AK +  + 
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y +L+N   K    DEA+ +  E       PDT T+N L+ GLS+ G  
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
              ++    M + G   D++TYN L+    +  +  +   L + +  +   SP++ TY  
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHI-IEIGISPNIRTYNI 461

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK G++  A  I+  +++ G +P+  T+N++I G  K G +  AE +  +M++  
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521

Query: 398 YLPDVVTFSSLI 409
           YLP+ +TF +++
Sbjct: 522 YLPNYITFDTIV 533


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 206/412 (50%), Gaps = 3/412 (0%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH-LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            + YN ++  L   G ++ V  +++ M ++GH  P++      +S+  + G+ D+A  LL+
Sbjct: 1185 QAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLN 1244

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            + +   +  +T +Y  L+    K N+A  A+ +F+E    Y +PD +T+  LI+GL + G
Sbjct: 1245 EMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 1304

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             + +A+ FF +M   GC PD V  N +I+ L +   +    +L +E++      P VVTY
Sbjct: 1305 RIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEME-TLRCIPSVVTY 1363

Query: 336  TSVISG-YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
             ++I   +    +  +    +  M   GI PS+ T+++LIDGF K   M  A  + E M 
Sbjct: 1364 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMD 1423

Query: 395  SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
              G+ P    + SLID   +  + +   +L  E+K    S +   + ++I  L K  RL+
Sbjct: 1424 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLD 1483

Query: 455  DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            DA     ++      P  + YN ++ G  + G +DEA   +  M+E  C PD  ++ I++
Sbjct: 1484 DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 1543

Query: 515  IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             G    G    A+ + + M +    PD ++ N+++  L   GM  EA ++M+
Sbjct: 1544 NGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMK 1595



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 170/365 (46%), Gaps = 71/365 (19%)

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            V++A   FY + +  C P    YN++I  L    +  + H+L  E+  +    PD VTY+
Sbjct: 1165 VRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYS 1224

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSA----------------------------- 367
            ++IS +CKLG+ D A  + NEM   G++P+                              
Sbjct: 1225 ALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQ 1284

Query: 368  ------VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
                   T+  LI G GK G +  A +    M   G  PD V  +++I+   + G+L+  
Sbjct: 1285 YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 1344

Query: 422  LKLCDEMKGKNLSPNVYTFTILINALCK-ENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            +KL  EM+     P+V T+  +I AL + ++R ++   + +++K + + P  F Y+ +ID
Sbjct: 1345 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 1404

Query: 481  GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI-------------------------- 514
            GFCK   +++A +++ EM+EK   P    +  LI                          
Sbjct: 1405 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 1464

Query: 515  --------IGHCMK-GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                    I H  K GR+ +AI++F++M ++GCAPD    N+L+S L + GM +EA   M
Sbjct: 1465 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 1524

Query: 566  QRASE 570
            +R  E
Sbjct: 1525 RRMQE 1529



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 2/237 (0%)

Query: 145  FSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
            F R+  S ++ S  TY++++   C+    +   ++ + M   G  P        + +  +
Sbjct: 1384 FERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 1443

Query: 204  AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            A + D A  L  + +    + S  +Y  ++  L K    D+A+ MF E  +L   PD + 
Sbjct: 1444 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYA 1503

Query: 264  FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            +N L+ GL+R G + +A      M   GC PDI +YN +++GL +     R  E+L  +K
Sbjct: 1504 YNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 1563

Query: 324  FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
             +S   PDVV+Y +V+      G  ++A+ +  EMN+ G +   +T++ +++  GKV
Sbjct: 1564 -QSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKV 1619



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 70/157 (44%)

Query: 155  SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            S + Y ++++ L + G  D    +FD M   G  P+       +S   R G  D A   +
Sbjct: 1465 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 1524

Query: 215  SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
             + +          YN +LN L K      A+ M     +   +PD  ++N ++  LS  
Sbjct: 1525 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 1584

Query: 275  GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
            G  ++A +   +M + G   D++TY++++  + +V+ 
Sbjct: 1585 GMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 1621



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 2/144 (1%)

Query: 429  KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL-VPKPFMYNPVIDGFCKAGN 487
            K +N   +  T+  LI+ L    +  +  + ++++  N + V  P   + V+     A  
Sbjct: 1105 KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKM 1164

Query: 488  VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVN 546
            V +A  I  +++ ++C+P    +  +II    +G+  +   ++N+M   G C PD +T +
Sbjct: 1165 VRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYS 1224

Query: 547  SLISCLLKGGMPNEAFRIMQRASE 570
            +LIS   K G  + A +++    E
Sbjct: 1225 ALISAFCKLGRRDSAIQLLNEMKE 1248


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 202/421 (47%), Gaps = 8/421 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN V+   C+    D    V D M+  G  P+       + +    G+ D A  ++ Q 
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y  L+ A + Q   DEA+ +  E      +PD +T+N+++ G+ + G +
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGML 267

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AFEF   +   GC   + TYN L+  L    +   G +L+ ++  K    P+ +TY++
Sbjct: 268 DRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG-CEPNPITYST 326

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C+ GK+D+A  +   M    + P   +++ LI    + G +  A    + M+S G
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +LPD+++++S++   C+NG  ++ L + +++      PN  ++  L  AL        A 
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIG 516
             + ++  N + P    YN +I   C+ G VD+A  ++ +M E ++C+P  +++  +++G
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI------MQRASE 570
            C   R+++AI +   M+  GC P++ T   LI  +   G   +A  +      M   SE
Sbjct: 507 LCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAISE 566

Query: 571 D 571
           D
Sbjct: 567 D 567



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 197/426 (46%), Gaps = 6/426 (1%)

Query: 153 NHSFKTYNLVMRSL---CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           ++ F+  N  M++L   C+   +D       +M + G+ P+  +    +       K + 
Sbjct: 72  DYDFRDTNF-MKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEK 130

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +          F YN++++   K +  D A  +     +   +PD  T+NILI 
Sbjct: 131 AIQVM-EILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIG 189

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
                G +  A      +    C P ++TY  LI        +    +LL E+       
Sbjct: 190 NFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEM-LSRGLR 248

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD  TY  V++G CK G +D+A    + ++  G      T+N+L+      G     E +
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKL 308

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              ML  G  P+ +T+S+LI   CR+G++++   +   MK K L+P+ Y++  LI+ALC+
Sbjct: 309 MSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCR 368

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E +++ A  FL  +     +P    YN ++   CK GN DEA  I  ++ E  C P+  +
Sbjct: 369 EGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGS 428

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +  L       G  + A+ +  +ML  G  PD+IT NSLISCL + G+ ++A  ++    
Sbjct: 429 YNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMF 488

Query: 570 EDQNLQ 575
           E +  Q
Sbjct: 489 ESEKCQ 494



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 41/297 (13%)

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           RVNE        K  K   ++      +   ++  CK  K D++      M + G KP  
Sbjct: 60  RVNET-------KPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDV 112

Query: 368 V----------------------------------TFNVLIDGFGKVGNMVSAEYMRERM 393
           +                                   +N +I GF K   +  A  + +RM
Sbjct: 113 ILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRM 172

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G+ PDVVT++ LI  +C  G+L+  L++ D++   N  P V T+TILI A   +  +
Sbjct: 173 KKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGI 232

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           ++A + L ++    L P  + YN V++G CK G +D A   ++ + +  C     T+ IL
Sbjct: 233 DEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNIL 292

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +     +G+      + + ML  GC P+ IT ++LI+ L + G  +EA  +++   E
Sbjct: 293 LRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKE 349


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 216/456 (47%), Gaps = 39/456 (8%)

Query: 137 KLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMI 194
           KLG  F    ++  L    +  T+N ++  LC  G + ++V++V D M    H+P+   +
Sbjct: 140 KLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELV-DCMVLSQHVPDLITL 198

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              V+      +   A  L+++        + F Y  +LN + K  N   A+ + ++   
Sbjct: 199 NTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEH 258

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
              +P   T+ I+I  L + G +  A  FF +M + G   ++ TYN+LI   C       
Sbjct: 259 RKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDD 318

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
           G +LL+++    + +P+VVT++++I    K GK+ +A  +YNEM + GI+P+ +T+N LI
Sbjct: 319 GAQLLRDM-ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLI 377

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL---------- 424
            G      +  A  M + M+S G  PD+ T++ LI+G+C+  Q++ G++L          
Sbjct: 378 YGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMI 437

Query: 425 -------------C------------DEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
                        C             EM  + + P + T+ IL++ LC    L +A   
Sbjct: 438 ADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGI 497

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L Q+    +     +YN +I G C A  VD+A  +   +  K  K D  ++ I++ G C 
Sbjct: 498 LDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCK 557

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           +  + EA ++F KM   G  PD  T N+LI   L+G
Sbjct: 558 RSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRG 593



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 174/343 (50%), Gaps = 1/343 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  +N+LLN L  +    EAV +          PD  T N ++ GL     V +A +  
Sbjct: 159 NTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLI 218

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + GC P+  TY  +++ +C+    A   +LL++++ + +  P VVTYT +I   CK
Sbjct: 219 ARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHR-KIKPHVVTYTIIIDNLCK 277

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A   ++EM + GIK +  T+N LI  F   G       +   M++    P+VVT
Sbjct: 278 DGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVT 337

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           FS+LID   + G+L +   L +EM  + + PN  T+  LI  LC + RL++A + +  + 
Sbjct: 338 FSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMV 397

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
                P  + YN +I+GFCKA  VD+   +  +M  +    D VT++ LI G C   +++
Sbjct: 398 SKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            A  +F +M+  G  P  +T   L+  L   G   EA  I+ +
Sbjct: 458 VAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQ 500



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 198/401 (49%), Gaps = 7/401 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI---EFFVSSCIRAGKCDAAKGLL 214
           TY  ++  +C+ G   +     D +R   H    P +      + +  + G+ D A    
Sbjct: 232 TYGPILNRMCKSG---NTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFF 288

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S+     +  + F YNSL+ +       D+   + ++       P+  TF+ LI  L + 
Sbjct: 289 SEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKE 348

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G++ +A + + +M + G  P+ +TYN+LI GLC    +   ++++ ++       PD+ T
Sbjct: 349 GKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMM-DLMVSKGCDPDIWT 407

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I+G+CK  ++D    ++ +M+  G+    VT++ LI GF +   ++ A+ + + M+
Sbjct: 408 YNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMV 467

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S G  P ++T++ L+DG C NG+L + L + D+M    +  ++  + I+I+ +C  N+++
Sbjct: 468 SQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVD 527

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA      L    +      YN ++ G CK  ++ EA+ +  +M+E   +PD  T+  LI
Sbjct: 528 DAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLI 587

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
             H     +  ++ +  +M R G + D  TV  ++  L  G
Sbjct: 588 RAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSG 628



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 168/341 (49%), Gaps = 1/341 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N L   L +    D  + + K+        D +T NI+I    R  ++  AF     + 
Sbjct: 93  FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF 152

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P+ VT+NTL++GLC    V    EL+ +    S+  PD++T  ++++G C   ++
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAVELV-DCMVLSQHVPDLITLNTIVNGLCLKDRV 211

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  +   M + G +P+  T+  +++   K GN  SA  +  +M      P VVT++ +
Sbjct: 212 SEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTII 271

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID  C++G+L+  L    EM+ K +  NV+T+  LI + C   R +D  + L+ +    +
Sbjct: 272 IDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKI 331

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    ++ +ID   K G + EA  +  EM  +  +P+ +T+  LI G C   R+ EA  
Sbjct: 332 TPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQ 391

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           + + M+  GC PD  T N LI+   K    ++  R+ ++ S
Sbjct: 392 MMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS 432



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 165/323 (51%), Gaps = 1/323 (0%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D+AV +F+   R    P    FN L   L+R  +          M   G + D+ T N +
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+  CR  ++      + ++ FK  + P+ VT+ ++++G C  G++ +A  + + M    
Sbjct: 132 INCFCRRRKLGFAFSAMGKI-FKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P  +T N +++G      +  A  +  RM++ G  P+  T+  +++  C++G     L
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  +M+ + + P+V T+TI+I+ LCK+ RL+DA  F  +++   +    F YN +I  F
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G  D+   ++ +M  ++  P+ VTF+ LI     +G++ EA  ++N+M+  G  P+ 
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT 370

Query: 543 ITVNSLISCLLKGGMPNEAFRIM 565
           IT NSLI  L      +EA ++M
Sbjct: 371 ITYNSLIYGLCNDKRLDEANQMM 393


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 183/376 (48%), Gaps = 7/376 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++ +    V    R G+ D A+ ++    P    ++   Y +L +   +     +A  +
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVA---YGALTDGYCRAGRLGDARRV 157

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                 +  QP+ +T+N LI  L   G+V+ A     DM   GC+PD+VTYN L+   C+
Sbjct: 158 VGG---MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
                +  EL+  ++ +   +P+ VTY  ++ G C  G +D A  +   + S G KPS V
Sbjct: 215 GRGYRQAMELIDLMRAEG-CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTV 273

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            +N ++ G         A+ +   ML     P+  TF+ +I   CR G L Q ++L ++M
Sbjct: 274 NYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 333

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
                + N+ T+  +IN LC++  ++ A   L ++K     P    YN ++ G C A   
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            +A  ++  M +  C PD VTF  LI   C KG MV+AI +F +M   GC P+ IT +++
Sbjct: 394 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 453

Query: 549 ISCLLKGGMPNEAFRI 564
           IS L K    ++A  +
Sbjct: 454 ISGLAKATKLDQALEL 469



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 196/392 (50%), Gaps = 7/392 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ + C+   +     + D MR++G  PN+      +      G  D A  LL   
Sbjct: 204 TYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNL 263

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ST  YN++L  L       +A  +  E  R    P+  TFN++I  L R G +
Sbjct: 264 PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 323

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M   GC+ +IVTYN +I+GLC    V     LL ++K      PD+VTY +
Sbjct: 324 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG-CKPDIVTYNT 382

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C   +   A  + + M   G  P  VTFN LI    + G MV A  + ++M   G
Sbjct: 383 LLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 442

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +T+S++I G  +  +L+Q L+L +EM  K  +P+   + +L   L  ++ + +A 
Sbjct: 443 CTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAI 501

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + +++L+ + + P   +YN ++ G C+ G  + A  I+A M    C PD +T+ ILI G 
Sbjct: 502 QTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 561

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             +G + EA  +  K+    C+  D+ VNSLI
Sbjct: 562 AYEGYLNEARELLIKL----CS-RDVLVNSLI 588



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 194/408 (47%), Gaps = 2/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +LCE G       V D M   G  P+       + +  +      A  L+   
Sbjct: 169 TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 228

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R    T +   YN L++ +  + + D+A+ + +       +P T  +N +++GL      
Sbjct: 229 RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 288

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E   +M    C P+  T+N +I  LCR   + +  +LL+++  K   + ++VTY +
Sbjct: 289 GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS-KHGCTANIVTYNA 347

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C+   +D A G+ ++M S G KP  VT+N L+ G       V AE + + M   G
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNG 407

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD VTF++LI   C+ G +   +++  +M  K  +PN  T++ +I+ L K  +L+ A 
Sbjct: 408 CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 467

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++      P   +Y  + +       ++EA   V ++++    P  V +  +++G 
Sbjct: 468 ELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 526

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C  G+   AI I   M+  GC PDD+T   LI  L   G  NEA  ++
Sbjct: 527 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 191/413 (46%), Gaps = 12/413 (2%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQF 217
           N ++R LC  G  D  + V          P + ++ +        RAG+   A+ ++   
Sbjct: 107 NRLVRDLCRRGRPDDAERVVGACG-----PAATVVAYGALTDGYCRAGRLGDARRVVGGM 161

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  + + YN L++ L ++    +A+ +  +       PD  T+NIL++   +    
Sbjct: 162 ---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGY 218

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E    M + GC+P+ VTYN L+ G+C   +V    ELL+ +       P  V Y +
Sbjct: 219 RQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG-CKPSTVNYNT 277

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G C   +   A  +  EM      P+  TFNV+I    + G +  A  + E+M   G
Sbjct: 278 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 337

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              ++VT++++I+G C    ++  + L  +MK     P++ T+  L+  LC   +  DA 
Sbjct: 338 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAE 397

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             +  +  N  +P    +N +I   C+ G + +A  +  +M +K C P+ +T++ +I G 
Sbjct: 398 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 457

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
               ++ +A+ +FN+M   G  PD I    L  CL       EA + +++  +
Sbjct: 458 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQD 509



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 12/371 (3%)

Query: 198 VSSCIRAGKCDAAKGLL-SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
           +S+ +  G  DAA  L+ S  RP +  ++    N L+  L ++   D+A  +        
Sbjct: 78  LSALVHRGDLDAALRLVESSPRPPDAALA----NRLVRDLCRRGRPDDAERVVGACGPAA 133

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           +      +  L  G  R G +  A      +G     P+  TYN LI  LC   +V    
Sbjct: 134 T---VVAYGALTDGYCRAGRLGDARRV---VGGMPVQPNAYTYNPLIHTLCERGQVRDAL 187

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            +L ++  +   +PDVVTY  ++   CK     +A  + + M + G  P+ VT+NVL+DG
Sbjct: 188 SVLDDMLCRG-CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
               G++  A  +   + S G  P  V +++++ G C   +     +L  EM  +N  PN
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             TF ++I +LC++  L  A + L+++  +        YN +I+G C+  NVD A  +++
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 366

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +M+   CKPD VT+  L+ G C   + V+A  + + M + GC PD++T N+LI  L + G
Sbjct: 367 KMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKG 426

Query: 557 MPNEAFRIMQR 567
           +  +A  + ++
Sbjct: 427 LMVDAIEVFKQ 437



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 10/339 (2%)

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           L+ALV + + D A+ + +   R    PD    N L++ L R G    A      +G+ G 
Sbjct: 78  LSALVHRGDLDAALRLVESSPR---PPDAALANRLVRDLCRRGRPDDAERV---VGACGP 131

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           +  +V Y  L  G CR   +     ++  +  +    P+  TY  +I   C+ G++  A 
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRVVGGMPVQ----PNAYTYNPLIHTLCERGQVRDAL 187

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            + ++M   G  P  VT+N+L++   K      A  + + M + G  P+ VT++ L+DG 
Sbjct: 188 SVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGM 247

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C  G ++  L+L   +      P+   +  ++  LC   R  DA   + ++   +  P  
Sbjct: 248 CGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNE 307

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             +N VI   C+ G + +A  ++ +M +  C  + VT+  +I G C +  +  A+ + +K
Sbjct: 308 ATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSK 367

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           M   GC PD +T N+L+  L       +A  +M   +++
Sbjct: 368 MKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQN 406


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 190/374 (50%), Gaps = 17/374 (4%)

Query: 164 RSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           R LC +G    + Q+V + MR  G +P++      ++   +A + D A  L  + +   V
Sbjct: 425 RCLCGVGKFEKAFQIVKEMMRK-GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGV 483

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
               + Y  L+++  K    ++A   F E       P+  T+  L+    +  ++ +A +
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAND 543

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-----KFKSEF--------- 328
            F+ M    C P+ +TY+ LI GLC+  E+ +  E+  ++       +S+F         
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603

Query: 329 -SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SP+VVTY ++++G CK  K+  A  + + M + G +P+ + ++ L+DGF KVG + SA+
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +  RM   GYLP V T++SLID   ++G+L+  +K+  +M   + +PNV T+T +++ L
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGL 723

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK      A   L  ++     P    Y  +IDG  KAG VD    +  +M+ K C P+ 
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNY 783

Query: 508 VTFTILIIGHCMKG 521
           VT+ ILI   C  G
Sbjct: 784 VTYRILINHCCAAG 797



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 209/417 (50%), Gaps = 23/417 (5%)

Query: 156 FKTYNLVMRSLCEMG------LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           +  YN+ + S+C         L D  + V++ M     + N      F       GK + 
Sbjct: 376 YVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEK 435

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  ++ +            Y  ++  L +    D+A  +F+E  ++   PD +T+ ILI 
Sbjct: 436 AFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILID 495

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              + G +++A  +F +M S GCSP++VTY  L+    +  ++ + +++   +   + + 
Sbjct: 496 SFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACY- 554

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEM----------------NSCGIKPSAVTFNVL 373
           P+ +TY+++I G CK G++ KA  +Y ++                ++  I P+ VT+  L
Sbjct: 555 PNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGAL 614

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           ++G  K   +  A  + + ML+ G  P+ + + +L+DG+C+ G+++   ++   M     
Sbjct: 615 VNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGY 674

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+V+T+T LI+ + K+ RL+ A + L Q+  +   P    Y  ++DG CK G  ++A  
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALN 734

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           +++ ME+K C P+ VT+T LI G    G++   + +F +M   GCAP+ +T   LI+
Sbjct: 735 LLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILIN 791



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 222/486 (45%), Gaps = 57/486 (11%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           KR+D  K  L F E  +V +  N    TY +++ S C+ GL +  Q  FD MRS G  PN
Sbjct: 466 KRVD--KAFLLFQEMKKVGV--NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPN 521

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                  + + +++ +   A  +  +        +   Y++L++ L K     +A  ++ 
Sbjct: 522 VVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYA 581

Query: 251 E------------YFRLYS----QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           +            YF         P+  T+  L+ GL +  +V  A +    M + GC P
Sbjct: 582 KLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEP 641

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + + Y+ L+ G C+V E+    E+   +  K  + P V TYTS+I    K G++D A  +
Sbjct: 642 NQIVYDALVDGFCKVGEIDSAQEVFLRMT-KCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            ++M      P+ VT+  ++DG  K G    A  +   M   G  P+VVT+++LIDG  +
Sbjct: 701 LSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGK 760

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND------------------- 455
            G+++ GL+L  +MK K  +PN  T+ ILIN  C    L+D                   
Sbjct: 761 AGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQG 820

Query: 456 --------ARRFL------KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
                   ++RFL      ++++ +D  P   +Y  +ID F KAG ++ A  +  EM E 
Sbjct: 821 YRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEV 880

Query: 502 RCK---PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
                   K   T LI   C+  ++ EA++++++M R G  PD      L+  L++    
Sbjct: 881 SSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKW 940

Query: 559 NEAFRI 564
           NEA ++
Sbjct: 941 NEALQL 946



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 197/435 (45%), Gaps = 29/435 (6%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++  L E  L +        MR + ++PN       ++  ++  +    K +++      
Sbjct: 277 MISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEG 336

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS---QPDTWTFNILIQGLSRIGEVK 278
              S  ++NSL++      NA++  Y +K + R+ +    P    +NI I  +    E+ 
Sbjct: 337 CNPSPSLFNSLVHTYC---NAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELP 393

Query: 279 K------AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
                  A + + +M    C  + +        LC V +  +  +++KE+  K  F PD 
Sbjct: 394 NPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKG-FVPDA 452

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TYT VI+  C+  ++DKA  ++ EM   G+ P   T+ +LID F K G +  A+   + 
Sbjct: 453 STYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDE 512

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G  P+VVT+++L+  Y ++ QL Q   +   M G    PN  T++ LI+ LCK   
Sbjct: 513 MRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGE 572

Query: 453 LNDARRFLKQL---------------KWNDLV-PKPFMYNPVIDGFCKAGNVDEANVIVA 496
           +  A     +L               K  D + P    Y  +++G CKA  V +A+ ++ 
Sbjct: 573 IQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLD 632

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M    C+P+++ +  L+ G C  G +  A  +F +M + G  P   T  SLI  + K G
Sbjct: 633 AMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDG 692

Query: 557 MPNEAFRIMQRASED 571
             + A +++ +  +D
Sbjct: 693 RLDLAMKVLSQMLKD 707



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 155/385 (40%), Gaps = 49/385 (12%)

Query: 232 LLNALVK----QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           LLN LV+    Q    EA+           +P   T+N L+Q L+  G+V+ AF    +M
Sbjct: 171 LLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEM 230

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            + G   D  T  +    LC+        +LL+    + +F  D V  T +ISG  +   
Sbjct: 231 SASGFCMDRSTVGSFAQALCKEGRWGDALDLLE----REDFKLDTVLCTQMISGLMEASL 286

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            ++A    + M      P+ VT+  L+ GF K   +   + +   M++ G  P    F+S
Sbjct: 287 FNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNS 346

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC------------------- 448
           L+  YC         KL + M      P    + I I ++C                   
Sbjct: 347 LVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYE 406

Query: 449 ----------KENRLNDAR------------RFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
                     K N  N AR            + +K++     VP    Y  VI   C+A 
Sbjct: 407 EMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAK 466

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            VD+A ++  EM++    PD  T+TILI   C  G + +A S F++M   GC+P+ +T  
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
           +L+   LK     +A  I  R   D
Sbjct: 527 ALLHAYLKSKQLYQANDIFHRMVGD 551


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 186/384 (48%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++ ++++  CE G       +   +   G  PN  +    +  C + G    AK L  + 
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKM 219

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y+ L+N   KQ    E   M++   R    P+ + +N LI      G V
Sbjct: 220 DRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMV 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF+ F +M   G +  ++TYN LI GLCR  +     +L+ +V  K   SP++VTY  
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN-KVGLSPNIVTYNI 338

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+C +GKMD A  ++N++ S G+ P+ VT+N LI G+ KV N+  A  + + M    
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT++ LID + R     +  ++   M+   L P+VYT+++LI+ LC    + +A 
Sbjct: 399 IAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEAS 458

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  K L    L P   +YN +I G+CK G+   A  ++ EM      P+  +F   I   
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLL 518

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
           C   +  EA  +  +M+  G  P 
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPS 542



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 190/389 (48%), Gaps = 14/389 (3%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           L  +P+ +  V++ + +   D A   L      G V +S   +N+L+  L++ N  D+A 
Sbjct: 86  LTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSN-TFNNLMCLLIRSNYFDKAW 144

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           ++F E  +     D ++F I+I+G    G   K F     +  FG SP++V Y TLI G 
Sbjct: 145 WIFNE-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+   V     L  ++  +    P+  TY+ +++G+ K G   +   +Y  M   GI P+
Sbjct: 204 CKYGNVMLAKNLFCKMD-RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN 262

Query: 367 AVTFNVLIDGFGKVGNMVSAEY-----MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           A  +N LI  +   G MV   +     MRE+ ++ G    V+T++ LI G CR  +  + 
Sbjct: 263 AYAYNCLISEYCN-GGMVDKAFKVFAEMREKGIACG----VMTYNILIGGLCRGKKFGEA 317

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           +KL  ++    LSPN+ T+ ILIN  C   +++ A R   QLK + L P    YN +I G
Sbjct: 318 VKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAG 377

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           + K  N+  A  +V EMEE+   P KVT+TILI          +A  + + M + G  PD
Sbjct: 378 YSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPD 437

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
             T + LI  L   G   EA ++ +   E
Sbjct: 438 VYTYSVLIHGLCVHGNMKEASKLFKSLGE 466



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 202/404 (50%), Gaps = 2/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N +M  L      D    +F+ ++S   L ++      +  C  AG       LL+  
Sbjct: 126 TFNNLMCLLIRSNYFDKAWWIFNELKSKVVL-DAYSFGIMIKGCCEAGYFVKGFRLLAML 184

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +  +Y +L++   K  N   A  +F +  RL   P+  T+++L+ G  + G  
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQ 244

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++ F+ + +M   G  P+   YN LIS  C    V +  ++  E++ K   +  V+TY  
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKG-IACGVMTYNI 303

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C+  K  +A  + +++N  G+ P+ VT+N+LI+GF  VG M +A  +  ++ S G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG 363

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P +VT+++LI GY +   L   L L  EM+ + ++P+  T+TILI+A  + N    A 
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKAC 423

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                ++ + LVP  + Y+ +I G C  GN+ EA+ +   + E   +P+ V +  +I G+
Sbjct: 424 EMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGY 483

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C +G    A+ + N+M+  G  P+  +  S I  L +     EA
Sbjct: 484 CKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEA 527



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 162/321 (50%), Gaps = 1/321 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+++M    + GL      +++ M+  G +PN+      +S     G  D A  + ++ 
Sbjct: 230 TYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +      YN L+  L +     EAV +  +  ++   P+  T+NILI G   +G++
Sbjct: 290 REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKM 349

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  + S G SP +VTYNTLI+G  +V  +A   +L+KE++ +   +P  VTYT 
Sbjct: 350 DTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC-IAPSKVTYTI 408

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  + +L   +KA  +++ M   G+ P   T++VLI G    GNM  A  + + +    
Sbjct: 409 LIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH 468

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V ++++I GYC+ G   + L+L +EM    + PNV +F   I  LC++ +  +A 
Sbjct: 469 LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAE 528

Query: 458 RFLKQLKWNDLVPKPFMYNPV 478
             L Q+  + L P   +Y  V
Sbjct: 529 LLLGQMINSGLKPSVSLYKMV 549


>gi|356507504|ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Glycine max]
          Length = 555

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 196/422 (46%), Gaps = 15/422 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  +++ +   LC +   D    +F+ M+  G  P+       ++   + G+ + A   L
Sbjct: 12  SVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAISFL 71

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                  + +    Y+SL+         +EA   +   F+    PD   + ILI+GLS  
Sbjct: 72  RLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRGLSSE 131

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V +A +   +M   G  PD V YN +I GLC V  + R   L  E+     F  +V T
Sbjct: 132 GRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQGFH-NVCT 190

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM- 393
           +T +I   CK G  +KA  I+N+M   G  PS VTFN L+DG  K G +  A  +  +M 
Sbjct: 191 HTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYKME 250

Query: 394 ----------LSFG--YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
                     LS G   + D V     ++  C  GQL    KL  ++ G  + P++ T+ 
Sbjct: 251 IGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIVTYN 310

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           +LIN  CK + +N A +  K ++   L P P  Y  +IDG  + G  ++A  I   M + 
Sbjct: 311 VLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLKH 370

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C+P    +  L+   C K R+ +A S++ + L+     +D ++N+L  C ++G +  +A
Sbjct: 371 GCEPSFEVYRALMTWLCRKKRVSQAFSLYLEYLKNLRGREDNSINALEECFVRGEV-EQA 429

Query: 562 FR 563
           FR
Sbjct: 430 FR 431



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 170/388 (43%), Gaps = 49/388 (12%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   ++++ + L     ADEA  +F        QPD   +++LI G  ++G +++A  F 
Sbjct: 12  SVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAISFL 71

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +   G +  I  Y++LI+G          H     + FK    PDVV YT +I G   
Sbjct: 72  RLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRM-FKKGIVPDVVLYTILIRGLSS 130

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR-------------- 390
            G++ +A  +  EM   G+ P AV +N +I G   VG +  A  ++              
Sbjct: 131 EGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQGFHNVCT 190

Query: 391 ---------------------ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM- 428
                                 +M   G  P +VTF++L+DG C+ G+L +   L  +M 
Sbjct: 191 HTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYKME 250

Query: 429 ------------KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
                       +G +   +       +  +C+  +L DA + L QL  + ++P    YN
Sbjct: 251 IGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIVTYN 310

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I+GFCKA N++ A  +  +M+ K   P+ VT+  LI G    GR  +A  I   ML+ 
Sbjct: 311 VLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLKH 370

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRI 564
           GC P      +L++ L +    ++AF +
Sbjct: 371 GCEPSFEVYRALMTWLCRKKRVSQAFSL 398



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 49/356 (13%)

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           S P   +F+ +  GL  +    +A   F  M   G  PD++ Y+ LI+G C++  +    
Sbjct: 9   SVPSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAI 68

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
             L+ ++ +   +  +  Y+S+I+G+    + ++A   Y  M   GI P  V + +LI G
Sbjct: 69  SFLRLLE-RDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRG 127

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
               G +  A  M   M+  G +PD V ++ +I G C  G L++   L  E+       N
Sbjct: 128 LSSEGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQGFHN 187

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           V T TI+I  LCK      A+    +++     P    +N ++DG CKAG ++EA++++ 
Sbjct: 188 VCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLY 247

Query: 497 EME----------------------------EKRCK--------------------PDKV 508
           +ME                            E+ C+                    PD V
Sbjct: 248 KMEIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIV 307

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           T+ +LI G C    +  A+ +F  M   G +P+ +T  +LI  L + G   +AF+I
Sbjct: 308 TYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKI 363



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 124/238 (52%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V++++++ SG C + + D+A  ++N M   G +P  + ++VLI+G+ K+G +  A   
Sbjct: 11  PSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAISF 70

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              +   G    +  +SSLI G+    + N+       M  K + P+V  +TILI  L  
Sbjct: 71  LRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRGLSS 130

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E R+ +A + L ++    LVP    YN +I G C  G +D A  +  E+ E +   +  T
Sbjct: 131 EGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQGFHNVCT 190

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            TI+I   C +G   +A  IFNKM ++GC P  +T N+L+  L K G   EA  ++ +
Sbjct: 191 HTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYK 248



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 93/177 (52%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P V++FS++  G C   + ++  +L + MK +   P++  +++LIN  CK  RL +A  
Sbjct: 10  VPSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAIS 69

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           FL+ L+ + L      Y+ +I GF  A   +EA+     M +K   PD V +TILI G  
Sbjct: 70  FLRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRGLS 129

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
            +GR+ EA  +  +M++IG  PD +  N +I  L   G+ + A  +    SE Q   
Sbjct: 130 SEGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQGFH 186



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 168/390 (43%), Gaps = 40/390 (10%)

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           H+  T+ +++  LC+ G+ +  Q +F+ M   G  P+       +    +AGK + A  L
Sbjct: 186 HNVCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLL 245

Query: 214 LSQFRPGEVTMSTFMY----NSLLNALVKQNNAD---EAVYMFKEYFRLYS------QPD 260
           L +   G      F      + +L+++  Q   +   EA  +   Y  L         PD
Sbjct: 246 LYKMEIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPD 305

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+N+LI G  +   +  A + F DM + G SP+ VTY TLI GL RV       ++ K
Sbjct: 306 IVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHK 365

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGF- 377
            +  K    P    Y ++++  C+  ++ +A  +Y E   N  G + +++  N L + F 
Sbjct: 366 HM-LKHGCEPSFEVYRALMTWLCRKKRVSQAFSLYLEYLKNLRGREDNSI--NALEECFV 422

Query: 378 -GKVGNMVSAEYMRE-RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
            G+V          + R   F   P    ++ L+ G+C+  ++N+ L +   +   N++ 
Sbjct: 423 RGEVEQAFRGLLELDFRFRDFALAP----YTILLIGFCQAEKVNEALLIFTVLDKFNINI 478

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           N  +   LI  L +  RL+DA                F+Y  +  GF    +V E  + +
Sbjct: 479 NPASCVYLIRGLSENGRLDDAVNI-------------FVYT-LDKGFKLKSSVCEQLLKI 524

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
              ++K C  D V   +   G+C+ G  ++
Sbjct: 525 LSQDKKECAIDLVP-RMKSAGYCLNGLFLQ 553


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 185/346 (53%), Gaps = 1/346 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y  ++N L K+ + D A  +  +  +   +P    +N +I GL +   +  A   F +M 
Sbjct: 19  YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 78

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G  P++VTY++LIS LC     +    LL ++  + + +PDV T++++I  + K GK+
Sbjct: 79  TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEGKL 137

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  +Y+EM    I PS VT++ LI+GF     +  A+ M E M+S    PDVVT+++L
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G+C+  ++ +G+++  EM  + L  N  T+ ILI  L +    + A+   K++  + +
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN ++DG CK G +++A V+   ++  + +P   T+ I+I G C  G++ +   
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           +F  +   G  PD +  N++IS   + G   EA  + +   ED  L
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 210/423 (49%), Gaps = 37/423 (8%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           + D M + G  P+       V+   + G  D A  LL++   G++     +YN++++ L 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 238 KQNNADEAVYMFKE------------YFRLYS-----------------------QPDTW 262
           K  + D+A+ +FKE            Y  L S                        PD +
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           TF+ LI    + G++ +A + + +M      P IVTY++LI+G C  + +    ++ + +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K  F PDVVTY ++I G+CK  ++++   ++ EM+  G+  + VT+N+LI G  + G+
Sbjct: 183 VSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
              A+ + + M+S G  P+++T+++L+DG C+NG+L + + + + ++   + P +YT+ I
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I  +CK  ++ D       L    + P    YN +I GFC+ G+ +EA+ +  EM+E  
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             P+   +  LI      G    +  +  +M   G A D  T+  L++ +L  G  +++F
Sbjct: 362 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKSF 420

Query: 563 RIM 565
             M
Sbjct: 421 LDM 423



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 113/218 (51%)

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            + + M + G +P  VT+ V+++G  K G+   A  +  +M      P V+ ++++IDG 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+   ++  L L  EM+ K + PNV T++ LI+ LC   R +DA R L  +    + P  
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           F ++ +ID F K G + EA  +  EM ++   P  VT++ LI G CM  R+ EA  +F  
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           M+   C PD +T N+LI    K     E   + +  S+
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 219



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 131/274 (47%), Gaps = 4/274 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V  S++ S  TY+ ++   C     D  + +F++M S    P+       +    +  + 
Sbjct: 148 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 207

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           +    +  +     +  +T  YN L+  L +  + D A  +FKE       P+  T+N L
Sbjct: 208 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL + G+++KA   F  +      P I TYN +I G+C+  +V  G +L   +  K  
Sbjct: 268 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG- 326

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-VSA 386
             PDVV Y ++ISG+C+ G  ++A  ++ EM   G  P++  +N LI    + G+   SA
Sbjct: 327 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 386

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
           E ++E M S G+  D  T   L+     +G+L++
Sbjct: 387 ELIKE-MRSCGFAGDASTI-GLVTNMLHDGRLDK 418



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 76/143 (53%)

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           + L D M  K   P++ T+ +++N LCK    + A   L +++   L P   +YN +IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK  ++D+A  +  EME K  +P+ VT++ LI   C  GR  +A  + + M+     PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 542 DITVNSLISCLLKGGMPNEAFRI 564
             T ++LI   +K G   EA ++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKL 143


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 172/353 (48%), Gaps = 1/353 (0%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +++   AG   AAK  LS      +   +  Y S +    +      A  +F    +  
Sbjct: 80  LINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRG 139

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
                +T+  L+QGL   G V++A   F  M   GC+PD   Y+ ++ GLC         
Sbjct: 140 CARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAV 199

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            LL +   K  F P+V  Y ++I GYC  G ++ A  I+  M S G  P+  T+  LI G
Sbjct: 200 ALLTDAMGKG-FVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICG 258

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G +  A  +  RM+  G  P+VVT+++LI G C  G L    +L   M+   L+PN
Sbjct: 259 FCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPN 318

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +T  +LI+ALCK  R+ +A++FL  L    +     +Y  +ID  CK+G  D A+ ++ 
Sbjct: 319 EWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQ 378

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           ++  +   PD   ++ LI G C + +++EAIS+ N M+  G   + +    LI
Sbjct: 379 KIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILI 431



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 189/397 (47%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++ LC  G+      VF  M  DG  P+S +    V     AG+   A  LL+  
Sbjct: 146 TYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDA 205

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +YN+L++      + + A+ +FK        P+  T+  LI G  + G+V
Sbjct: 206 MGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKV 265

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   +  M   G +P++VTY TLI G C    +     LL  ++     +P+  T   
Sbjct: 266 ERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME-ACGLAPNEWTCLV 324

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK G++++A      +   GIK + V +  +ID   K G    A  + +++++ G
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PD   +SSLIDG CR  +L + + L ++M    +  N   FTILI+   +E R +  +
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    + P    Y   I  +C+ G +++A  ++ +M +   +P+  T+  LI G+
Sbjct: 445 MISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              G + +A S    M+  GC P+D +   L+  LLK
Sbjct: 505 ANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLK 541



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 191/442 (43%), Gaps = 36/442 (8%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             TY  ++ + C  G   + +     +   G  P+S     FV    R G    A  L  
Sbjct: 74  LHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFL 133

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                    + F Y +LL  L       EA+ +F   +     PD+  ++I++ GL   G
Sbjct: 134 LMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAG 193

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
              +A     D    G  P++  YN LI G C   ++    ++ K ++ K    P+V TY
Sbjct: 194 RAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCL-PNVRTY 252

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I G+CK GK+++A  +Y+ M   G+ P+ VT+  LI G    G++  A  +   M +
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA 312

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+  T   LID  C++G++ +  +    +  K +  N   +T +I+ALCK  + + 
Sbjct: 313 CGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDG 372

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA------------------------ 491
           A   ++++     VP   MY+ +IDG C+   + EA                        
Sbjct: 373 AHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID 432

Query: 492 -----------NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
                       +I   M     KPD VT+T+ I  +C  GRM +A S+  +M+  G  P
Sbjct: 433 KHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRP 492

Query: 541 DDITVNSLISCLLKGGMPNEAF 562
           +  T N+LI      G+ ++AF
Sbjct: 493 NLTTYNTLIKGYANLGLVSQAF 514



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 160/360 (44%), Gaps = 4/360 (1%)

Query: 209 AAKGLLSQFRPGEVTMST---FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           A  G+LS        M       Y +L+NA     +   A        R    PD+  + 
Sbjct: 54  ARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYT 113

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
             + G  R G    A   F  M   GC+    TY  L+ GLC    V     +   + + 
Sbjct: 114 SFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGM-WP 172

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              +PD   Y+ ++ G C  G+  +A  +  +    G  P+   +N LIDG+   G++  
Sbjct: 173 DGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLEL 232

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  + + M S G LP+V T++ LI G+C++G++ + + L   M    L+PNV T+T LI 
Sbjct: 233 AIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQ 292

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C E  L  A R L  ++   L P  +    +ID  CK G ++EA   +  + +K  K 
Sbjct: 293 GQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKV 352

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           ++V +T +I   C  G+   A ++  K++  G  PD    +SLI  L +     EA  ++
Sbjct: 353 NQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLL 412



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 1/305 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+  LI      G++  A      +   G +PD   Y + + G CR    A    L   +
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +   +    TY +++ G C  G + +A  ++  M   G  P +  +++++ G    G 
Sbjct: 136 PQRG-CARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGR 194

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
              A  +    +  G++P+V  +++LIDGYC  G L   + +   M+ K   PNV T+T 
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQ 254

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI   CK  ++  A     ++    L P    Y  +I G C  G+++ A  ++  ME   
Sbjct: 255 LICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG 314

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             P++ T  +LI   C  GR+ EA      +++ G   + +   S+I  L K G  + A 
Sbjct: 315 LAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAH 374

Query: 563 RIMQR 567
            +MQ+
Sbjct: 375 NLMQK 379



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/502 (21%), Positives = 195/502 (38%), Gaps = 88/502 (17%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++   C  G  +    +F  M+S G LPN       +    ++GK + A  L S+ 
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y +L+     + + + A  +          P+ WT  +LI  L + G +
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +F   +   G   + V Y ++I  LC+  +    H L++++     F PD   Y+S
Sbjct: 336 EEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKI-ITEGFVPDAHMYSS 394

Query: 338 VISGYCKLGKMDKATGIYNEM-----------------------------------NSCG 362
           +I G C+  K+ +A  + N+M                                    + G
Sbjct: 395 LIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAG 454

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +KP  VT+ V I  + + G M  AE M  +M+  G  P++ T+++LI GY   G ++Q  
Sbjct: 455 VKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAF 514

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKEN------------------------------- 451
                M      PN  ++T+L+  L K+N                               
Sbjct: 515 SSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKL 574

Query: 452 --------------------RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                               RL +A+ FL  ++  +L P   +Y  +I+   +   + EA
Sbjct: 575 QCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEA 634

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
              +  M ++   P   ++  +I   C +G    A SIF  +L      D+I    LI  
Sbjct: 635 LRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDG 694

Query: 552 LLKGGMPNEAFRIMQRASEDQN 573
           LL+ G   +  R++    E+QN
Sbjct: 695 LLQKGNTADCSRLLSFM-EEQN 715



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/448 (21%), Positives = 177/448 (39%), Gaps = 53/448 (11%)

Query: 145 FSR-VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           +SR +   L  +  TY  +++  C  G  +    +   M + G  PN       + +  +
Sbjct: 272 YSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G+ + A+  L       + ++  +Y S+++AL K    D A  + ++       PD   
Sbjct: 332 HGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHM 391

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           ++ LI GL R  ++ +A     DM   G   + V +  LI    R    +   +++ +  
Sbjct: 392 YSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFR-SDSPKMISDRM 450

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             +   PDVVTYT  I  YC+ G+M+ A  +  +M   G++P+  T+N LI G+  +G +
Sbjct: 451 AAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLV 510

Query: 384 VSAEYMRERMLSFGYLP-----------------------DVVTFSSLIDGYCRNGQLNQ 420
             A    + M+  G  P                       D ++   ++D       L +
Sbjct: 511 SQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEE 570

Query: 421 GLKL-CDE---------------------------MKGKNLSPNVYTFTILINALCKENR 452
            +KL C                             M+  NL+P+   +T +I    +   
Sbjct: 571 VIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKL 630

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L +A RFL  +   + +P+   Y  +I   C+ G+   A  I  ++  K    D++ + I
Sbjct: 631 LKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKI 690

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           LI G   KG   +   + + M    C P
Sbjct: 691 LIDGLLQKGNTADCSRLLSFMEEQNCRP 718



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/404 (20%), Positives = 151/404 (37%), Gaps = 52/404 (12%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           +++ +LC+ G  +  Q     +   G   N  +    + +  ++GK D A  L+ +    
Sbjct: 324 VLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITE 383

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
                  MY+SL++ L ++N   EA+ +  +      Q +   F ILI    R       
Sbjct: 384 GFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSP 443

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
                 M + G  PD+VTY   I   C+   +     ++ ++       P++ TY ++I 
Sbjct: 444 KMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQM-IDHGVRPNLTTYNTLIK 502

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL--------------------------- 373
           GY  LG + +A      M   G KP+  ++ VL                           
Sbjct: 503 GYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMK 562

Query: 374 ------------------------IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
                                   I    KV  +  A+     M S    P    ++ +I
Sbjct: 563 VLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMI 622

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +   R   L + L+  D M  +N  P + ++  +I ALC+E   + A+     +   +  
Sbjct: 623 ECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYN 682

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
                +  +IDG  + GN  + + +++ MEE+ C+P    ++ L
Sbjct: 683 RDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 4/170 (2%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P +   ++L+    R+G L+    L   M  +NL    +T+T LINA C    L  A+R
Sbjct: 40  VPPIRCLNTLLMALARHGMLSDMESLAARMPVRNL----HTYTTLINAYCHAGDLPAAKR 95

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L  L    L P    Y   + G+C+ G    A  +   M ++ C     T+  L+ G C
Sbjct: 96  HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
             G + EA+++F  M   GCAPD    + ++  L   G   EA  ++  A
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDA 205


>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 517

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 192/404 (47%), Gaps = 37/404 (9%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
           F+S   +  K +    LL            + +N  L+ L ++N    AV  F    +  
Sbjct: 85  FISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRG 144

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            +PD  ++ ILI GL R G+V  A E +  M   G SPD      L+ GLC   +V   +
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           E++ E    +     +V Y ++ISG+CK G+++KA  + + M+  G +P  VT+NVL++ 
Sbjct: 205 EMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNY 264

Query: 377 F----------GKVGNMVSA--------------------------EYMRERMLSFGYLP 400
           +          G +  MV +                           +M + M   G+  
Sbjct: 265 YYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFC- 323

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           DVV++S+LI+ +CR     +  KL +EM+ K +  NV TFT LI A  +E   + A++ L
Sbjct: 324 DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLL 383

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            Q+    L P    Y  ++D  CK+GNVD+A  I  +M E    PD +++  LI G C  
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRS 443

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           GR+ EAI +F  M    C PD++T   +I  L++    + A+++
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKV 487



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 199/445 (44%), Gaps = 37/445 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y   + +L + G+ D+   VFD MR   +   S     F+   ++  + + A+ +    
Sbjct: 11  AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDM 70

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P   ++  F Y+  ++ L K    +    + ++   L   PD W FNI +  L R  +V
Sbjct: 71  MPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKV 130

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F+ M   G  PD+V+Y  LI+GL R  +V    E+   +  +S  SPD     +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM-IRSGVSPDNKACAA 189

Query: 338 VISGYCKLGKMDKA-TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++ G C   K+D A   +  E+ S  +K S V +N LI GF K G +  AE ++  M   
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKI 249

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQ-----------GLKL--------------------C 425
           G  PD+VT++ L++ Y  N  L +           G++L                    C
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRC 309

Query: 426 DEMKGKNLSP----NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
                K + P    +V +++ LI   C+ +    A +  ++++   +V     +  +I  
Sbjct: 310 YSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKA 369

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           F + GN   A  ++ +M E    PD++ +T ++   C  G + +A  IFN M+     PD
Sbjct: 370 FLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPD 429

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQ 566
            I+ NSLIS L + G   EA ++ +
Sbjct: 430 AISYNSLISGLCRSGRVTEAIKLFE 454



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 178/364 (48%), Gaps = 6/364 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +Y +++  L   G + D+V++    +RS G  P++      V     A K D A  ++++
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALVVGLCHARKVDLAYEMVAE 209

Query: 217 -FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             +   V +S  +YN+L++   K    ++A  +     ++  +PD  T+N+L+       
Sbjct: 210 EIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNN 269

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE-LLKEVKFKSEFSPDVVT 334
            +K+A     +M   G   D  +YN L+   CRV+   R +  +LKE++ +     DVV+
Sbjct: 270 MLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRG--FCDVVS 327

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+++I  +C+     KA  ++ EM   GI  + VTF  LI  F + GN   A+ + ++M 
Sbjct: 328 YSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMT 387

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD + +++++D  C++G +++   + ++M    ++P+  ++  LI+ LC+  R+ 
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVT 447

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A +  + +K  +  P    +  +I G  +   +  A  +  +M +K    D+     LI
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507

Query: 515 IGHC 518
              C
Sbjct: 508 KASC 511



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 59/422 (13%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +++ +++G  D A  +  + R     + +  YN  +  LVK++  + A  ++++   +  
Sbjct: 16  IANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMGF 75

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA---- 313
               +T++  I GL ++ + +       DM + G  PDI  +N  +  LCR N+V     
Sbjct: 76  SLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQ 135

Query: 314 -------RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
                  RG E            PDVV+YT +I+G  + GK+  A  I+N M   G+ P 
Sbjct: 136 TFFCMVQRGRE------------PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183

Query: 367 AVTFNVLIDGFGKVGNM-VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
                 L+ G      + ++ E + E + S      +V +++LI G+C+ G++ +   L 
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALK 243

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL----------KWNDLVPK---- 471
             M      P++ T+ +L+N     N L  A   + ++           +N L+ +    
Sbjct: 244 SFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRV 303

Query: 472 -------PFM--------------YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
                   FM              Y+ +I+ FC+A N  +A  +  EM +K    + VTF
Sbjct: 304 SHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTF 363

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           T LI     +G    A  + ++M  +G +PD I   +++  L K G  ++A+ I     E
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIE 423

Query: 571 DQ 572
            +
Sbjct: 424 HE 425



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 36/269 (13%)

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           + Y S I+   K G +D A  +++EM     +  +  +N  I    K      AE +   
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G+     T+S  I G C+  +      L  +M+     P+++ F I ++ LC+EN+
Sbjct: 70  MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129

Query: 453 LNDA-RRFLKQLK-----------------------------WNDLV-----PKPFMYNP 477
           +  A + F   ++                             WN ++     P       
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189

Query: 478 VIDGFCKAGNVDEANVIVA-EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
           ++ G C A  VD A  +VA E++  R K   V +  LI G C  GR+ +A ++ + M +I
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKI 249

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           GC PD +T N L++      M   A  +M
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 1/196 (0%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R  C+ +S    +E   R  N K   K  E  R    +  +  T+  ++++    G    
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQK-GIVTNVVTFTSLIKAFLREGNSSV 378

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
            + + D M   G  P+       +    ++G  D A G+ +     E+T     YNSL++
Sbjct: 379 AKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLIS 438

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            L +     EA+ +F++       PD  TF  +I GL R  ++  A++ +  M   G + 
Sbjct: 439 GLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTL 498

Query: 295 DIVTYNTLISGLCRVN 310
           D    +TLI   C ++
Sbjct: 499 DRDVSDTLIKASCSMS 514


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 181/339 (53%), Gaps = 2/339 (0%)

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           ++C  +G   A K LL +            YN L+N + K+   DEA+          SQ
Sbjct: 25  ATCAESGVGQAMK-LLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQ 83

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+  T NI+++ +   G    A +   +M   GCSP +VT+N LI+ LCR   + R  ++
Sbjct: 84  PNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDI 143

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+++      +P+ ++Y  ++ G+CK  KMD+A      M S G  P  VT+N ++    
Sbjct: 144 LEKMPTHG-CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALC 202

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G + +A  +  ++ S G  P ++T++++IDG  + G+ +Q ++L  EM+GK L P+V 
Sbjct: 203 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVI 262

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T++ LI  L +E ++ +A +F   ++   + P  F YN ++ G CKA   D A   +A M
Sbjct: 263 TYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYM 322

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
             K CKP +V++TILI G   +G   EA+ + N++   G
Sbjct: 323 ISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 164/305 (53%), Gaps = 3/305 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  T+ ILI+       V +A +   +MGS GC PD+VTYN L++G+C+   +    + 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 319 LKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  +  + S+  P+V+T+  ++   C  G+   A  +  EM   G  PS VTFN+LI+  
Sbjct: 74  LNSMPSYGSQ--PNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G +  A  + E+M + G  P+ ++++ L+ G+C+  ++++ ++  + M  +   P++
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  ++ ALCK+ +++ A   L QL      P    YN VIDG  K G  D+A  ++ E
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  K  KPD +T++ LI G   +G++ EAI  F+ +   G  P+  T NS++  L K   
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 558 PNEAF 562
            + A 
Sbjct: 312 TDRAI 316



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 175/337 (51%), Gaps = 1/337 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y  L+ A   ++   +A+ +  E      +PD  T+N+L+ G+ + G + +A +F   M 
Sbjct: 19  YTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMP 78

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           S+G  P+++T+N ++  +C         +LL E+  K   SP VVT+  +I+  C+ G +
Sbjct: 79  SYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG-CSPSVVTFNILINFLCRKGLL 137

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  I  +M + G  P+++++N L+ GF K   M  A    E M+S G  PD+VT++++
Sbjct: 138 GRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTM 197

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +   C++G+++  ++L +++  K  SP + T+  +I+ L K  + + A   L +++   L
Sbjct: 198 LTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGL 257

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    Y+ +I G  + G V+EA     ++E    KP+  T+  ++ G C   +   AI 
Sbjct: 258 KPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAID 317

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
               M+  GC P +++   LI  +   G+  EA  ++
Sbjct: 318 FLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELL 354



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 170/342 (49%), Gaps = 3/342 (0%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY +++ + C E G+  ++++  D M S G  P+       V+   + G+ D A   L+ 
Sbjct: 18  TYTILIEATCAESGVGQAMKL-LDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNS 76

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                   +   +N +L ++       +A  +  E  R    P   TFNILI  L R G 
Sbjct: 77  MPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGL 136

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A +    M + GC+P+ ++YN L+ G C+  ++ R  + L E+       PD+VTY 
Sbjct: 137 LGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL-EIMVSRGCYPDIVTYN 195

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++++  CK GK+D A  + N+++S G  P  +T+N +IDG  KVG    A  +   M   
Sbjct: 196 TMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGK 255

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV+T+SSLI G  R G++ + +K   +++G  + PN +T+  ++  LCK  + + A
Sbjct: 256 GLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRA 315

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
             FL  +      P    Y  +I+G    G   EA  ++ E+
Sbjct: 316 IDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 1/272 (0%)

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C PD++TY  LI   C  + V +  +LL E+  +    PDVVTY  +++G CK G++D+A
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRG-CKPDVVTYNVLVNGMCKEGRLDEA 70

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
               N M S G +P+ +T N+++      G  + AE +   M+  G  P VVTF+ LI+ 
Sbjct: 71  IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            CR G L + + + ++M     +PN  ++  L++  CKE +++ A ++L+ +      P 
Sbjct: 131 LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              YN ++   CK G VD A  ++ ++  K C P  +T+  +I G    G+  +A+ + +
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLH 250

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           +M   G  PD IT +SLI+ L + G   EA +
Sbjct: 251 EMRGKGLKPDVITYSSLIAGLSREGKVEEAIK 282



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 130/245 (53%)

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           + + E  PDV+TYT +I   C    + +A  + +EM S G KP  VT+NVL++G  K G 
Sbjct: 7   QLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGR 66

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A      M S+G  P+V+T + ++   C  G+     KL  EM  K  SP+V TF I
Sbjct: 67  LDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNI 126

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LIN LC++  L  A   L+++  +   P    YNP++ GFCK   +D A   +  M  + 
Sbjct: 127 LINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C PD VT+  ++   C  G++  A+ + N++   GC+P  IT N++I  L K G  ++A 
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 563 RIMQR 567
            ++  
Sbjct: 247 ELLHE 251



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 157/314 (50%), Gaps = 1/314 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C+ G  D      + M S G  PN       + S    G+   A+ LL++ 
Sbjct: 53  TYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEM 112

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + S   +N L+N L ++     A+ + ++       P++ ++N L+ G  +  ++
Sbjct: 113 VRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKM 172

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A ++   M S GC PDIVTYNT+++ LC+  +V    ELL ++  K   SP ++TY +
Sbjct: 173 DRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG-CSPVLITYNT 231

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+GK D+A  + +EM   G+KP  +T++ LI G  + G +  A      +  FG
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+  T++S++ G C+  Q ++ +     M  K   P   ++TILI  +  E    +A 
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351

Query: 458 RFLKQLKWNDLVPK 471
             L +L    +V K
Sbjct: 352 ELLNELCSRGVVKK 365



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 106/205 (51%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  +T+ +LI+       +  A  + + M S G  PDVVT++ L++G C+ G+L++ +K 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            + M      PNV T  I++ ++C   R  DA + L ++      P    +N +I+  C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G +  A  I+ +M    C P+ +++  L+ G C + +M  AI     M+  GC PD +T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 545 VNSLISCLLKGGMPNEAFRIMQRAS 569
            N++++ L K G  + A  ++ + S
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLS 218



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%)

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           +R L     PDV+T++ LI+  C    + Q +KL DEM  +   P+V T+ +L+N +CKE
Sbjct: 5   DRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKE 64

Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
            RL++A +FL  +      P    +N ++   C  G   +A  ++ EM  K C P  VTF
Sbjct: 65  GRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTF 124

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            ILI   C KG +  AI I  KM   GC P+ ++ N L+    K    + A + ++
Sbjct: 125 NILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 1/227 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T+N+++  LC  GL      + + M + G  PNS      +    +  K D A   L
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                         YN++L AL K    D AV +  +       P   T+N +I GLS++
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+  +A E  ++M   G  PD++TY++LI+GL R  +V    +   +V+      P+  T
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG-VKPNAFT 298

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           Y S++ G CK  + D+A      M S G KP+ V++ +LI+G    G
Sbjct: 299 YNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEG 345



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 1/217 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++   C+    D      + M S G  P+       +++  + GK DAA  LL+Q 
Sbjct: 158 SYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQL 217

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +     YN++++ L K    D+AV +  E      +PD  T++ LI GLSR G+V
Sbjct: 218 SSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKV 277

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +FF+D+  FG  P+  TYN+++ GLC+  +  R  + L  +  K    P  V+YT 
Sbjct: 278 EEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKG-CKPTEVSYTI 336

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
           +I G    G   +A  + NE+ S G+   +    V++
Sbjct: 337 LIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 78/146 (53%)

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           +++ D    K   P+V T+TILI A C E+ +  A + L ++      P    YN +++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G +DEA   +  M     +P+ +T  I++   C  GR ++A  +  +M+R GC+P 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQR 567
            +T N LI+ L + G+   A  I+++
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEK 146


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 165/308 (53%), Gaps = 3/308 (0%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  +++  I GL + G++ +A E F +M   G +PD  TYN LI+GLC+  ++  G  L+
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E++ +  FSP VVTYT++I G+C  G++D A  I +EM   GI P+ VT+  LI G   
Sbjct: 150 DEMQARG-FSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208

Query: 380 VGNMVSAEYMRERMLSFGY--LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            G +  A  + + M   G    P+VVT++ LI G C+ G    G++  DEM      PN 
Sbjct: 209 CGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN 268

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+T LI+ LC++    +A   L ++          +YN +IDG CK G +D A  +   
Sbjct: 269 ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M EK   PD  T+T LI G C  G + EA+ +  +M   G  P+ +T  +LI+   +   
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADR 388

Query: 558 PNEAFRIM 565
            + A +++
Sbjct: 389 TDHALQLV 396



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 164/315 (52%), Gaps = 5/315 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y+  +N L K+    EA+ +F+E     S PD++T+NILI GL +  +++       +M 
Sbjct: 94  YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ 153

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G SP +VTY TLI G C    V    ++L E++ +   +P+ VTYT++I G C  G++
Sbjct: 154 ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG-ITPNTVTYTALIQGLCDCGEV 212

Query: 349 DKATGIYNEMNSCGIK--PSAVTFNVLIDGFGKVGNM-VSAEYMRERMLSFGYLPDVVTF 405
           ++A  +  EM   G +  P+ VT+  LI G  + G   +  E++ E ++S G  P+  T+
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS-GCFPNNATY 271

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           ++LI G C+ G   +   L +EM       +V  +  LI+ LCK   L+ AR     +  
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             + P  F Y  +I G C AG +DEA  ++ EM  K   P+ VT+T LI G     R   
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDH 391

Query: 526 AISIFNKMLRIGCAP 540
           A+ + N+M   G  P
Sbjct: 392 ALQLVNEMKSNGLMP 406



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 148/289 (51%), Gaps = 1/289 (0%)

Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           +F YN L+N L K    +  V +  E       P   T+  LI G    G V  A +   
Sbjct: 126 SFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILD 185

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK-SEFSPDVVTYTSVISGYCK 344
           +M   G +P+ VTY  LI GLC   EV R   +LKE+K + +E  P+VVTYT +I G C+
Sbjct: 186 EMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQ 245

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G  +      +EM   G  P+  T+  LI G  + G+ + A  +   M++ G   DVV 
Sbjct: 246 KGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVI 305

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++SLIDG C+ G+L+   ++   M  K ++P+V+T+T LI  LC    L++A   +++++
Sbjct: 306 YNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMR 365

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
              +VP    Y  +I+GF +A   D A  +V EM+     P    + IL
Sbjct: 366 AKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 158/320 (49%), Gaps = 3/320 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+  +  LC+ G       +F  M   G  P+S      ++   +  + +    L+ + 
Sbjct: 93  SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    + +   Y +L++        D A+ +  E       P+T T+  LIQGL   GEV
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212

Query: 278 KKAFEFFYDMGSFG--CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++A     +M   G  C P++VTY  LI GLC+      G E L E+     F P+  TY
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCF-PNNATY 271

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T++I G C+ G   +A  + NEM + G +   V +N LIDG  K+G +  A  M+  M+ 
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PDV T++SLI G C  G L++ L L  EM+ K + PN  T+T LIN   + +R + 
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDH 391

Query: 456 ARRFLKQLKWNDLVPKPFMY 475
           A + + ++K N L+P   +Y
Sbjct: 392 ALQLVNEMKSNGLMPAGDIY 411



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 146/275 (53%), Gaps = 3/275 (1%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D+++Y+  I+GLC+  ++A   E+ +E++ K   +PD  TY  +I+G CK  +++    +
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGS-APDSFTYNILINGLCKDAQLEMGVSL 148

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            +EM + G  P+ VT+  LI GF   G + +A  + + M   G  P+ VT+++LI G C 
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208

Query: 415 NGQLNQGLKLCDEMK--GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            G++ + + +  EMK  G    PNV T+T LI+ LC++        FL ++  +   P  
Sbjct: 209 CGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN 268

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             Y  +I G C+ G+  EA V++ EM    C+ D V +  LI G C  G +  A  +   
Sbjct: 269 ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           M+  G APD  T  SLI  L   G+ +EA  +MQ 
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQE 363



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 7/294 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+    +    + D M++ G  P        +     AG+ DAA  +L + 
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRI 274
               +T +T  Y +L+  L      + A+ + KE  +L      P+  T+  LI GL + 
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKE-MKLRGNECCPNVVTYTQLIHGLCQK 246

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVV 333
           G  +   EF  +M   GC P+  TY  LI GLC+         LL E V    E   DVV
Sbjct: 247 GLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCEL--DVV 304

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y S+I G CK+G++D A  +   M   G+ P   T+  LI G    G +  A  + + M
Sbjct: 305 IYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEM 364

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + G +P+ VT+++LI+G+ +  + +  L+L +EMK   L P    + IL  +L
Sbjct: 365 RAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 14/412 (3%)

Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL----LSQ 216
           +++ LC +    D++ +V   M   G +PN      F  + +  G CD  +      L Q
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPN-----VFSYNILLKGLCDENRSQEALELLQ 186

Query: 217 FRP---GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             P   G+       Y +++N   K+ + D+A   + E       P+  T++ +I  L +
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK 246

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              + KA E    M   G  P+  TYN+++ G C   +       LK++       PDVV
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM-HSDGVEPDVV 305

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S++   CK G+  +A  +++ M   G+KP   T+  L+ G+   G +V    + + M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  P+   FS LI  Y + G+++Q + +  +M+ + L+P+  T+  +I  LCK  R+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA R+ +Q+    L P   +YN +I   C     D+A  ++ EM ++    D + F  +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I  HC +GR++E+  +F+ M+RIG  PD IT ++LI      G  +EA +++
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 193/395 (48%), Gaps = 3/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN++++ LC+         +   M  DG    P+       ++   + G  D A G   
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  +   Y+S++ AL K    D+A+ +     +    P+  T+N ++ G    G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + K+A  F   M S G  PD+VTYN+L+  LC+        ++   +  K    P++ TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT-KRGLKPEITTY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ GY   G + +  G+ + M   GI P+   F++LI  + K G +  A  +  +M  
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD VT+ ++I   C++G++   ++  ++M  + LSP    +  LI++LC  ++ + 
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+  + ++    +      +N +ID  CK G V E+  +   M     KPD +T++ LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           G+C+ G+M EA  +   M+ +G  PD +T N+LI+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 189/439 (43%), Gaps = 36/439 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ +LC+    D    V   M  +G +PN       V     +G+   A G L + 
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS----- 272
               V      YNSL++ L K     EA  MF    +   +P+  T+  L+QG +     
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 273 ------------------------------RIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                         + G+V +A   F  M   G +PD VTY T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I  LC+   V       +++      SP  + Y S+I   C   K DKA  +  EM   G
Sbjct: 416 IGILCKSGRVEDAMRYFEQM-IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I    + FN +ID   K G ++ +E + + M+  G  PD++T+S+LIDGYC  G++++  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL   M    + P+  T+  LIN  CK +R+ DA    ++++ + + P    YN ++ G 
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            +      A  +   + E   + +  T+ I++ G C      EA+ +F  +       + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 543 ITVNSLISCLLKGGMPNEA 561
            T N +I  LLK G  +EA
Sbjct: 655 RTFNIMIGALLKVGRNDEA 673



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 169/327 (51%), Gaps = 6/327 (1%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF-FYDMGSFGCSPDIVTYNTLISGL 306
           + K+ FR+    D   F  L++GL        A +     M   GC P++ +YN L+ GL
Sbjct: 117 VIKKGFRV----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGL 172

Query: 307 CRVNEVARGHELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           C  N      ELL+ +     +  PDVV+YT+VI+G+ K G +DKA G Y+EM   GI P
Sbjct: 173 CDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILP 232

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           + VT++ +I    K   M  A  +   M+  G +P+  T++S++ GYC +GQ  + +   
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            +M    + P+V T+  L++ LCK  R  +AR+    +    L P+   Y  ++ G+   
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G + E + ++  M      P+   F+ILI  +  +G++ +A+ +F+KM + G  PD +T 
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQ 572
            ++I  L K G   +A R  ++  +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDER 439



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 196/422 (46%), Gaps = 2/422 (0%)

Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
            PK  + FL+    +  +     TYN +M  LC+ G     + +FD M   G  P     
Sbjct: 284 QPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
              +      G      GLL       +  + ++++ L+ A  KQ   D+A+ +F +  +
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               PDT T+  +I  L + G V+ A  +F  M     SP  + YN+LI  LC  ++  +
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             EL+ E+        D + + S+I  +CK G++ ++  +++ M   G+KP  +T++ LI
Sbjct: 463 AKELILEM-LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           DG+   G M  A  +   M+S G  PD VT+++LI+GYC+  ++   L L  EM+   +S
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVS 581

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P++ T+ I++  L +  R   A+     +  +    +   YN ++ G CK    DEA  +
Sbjct: 582 PDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRM 641

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              +     + +  TF I+I      GR  EA  +F  +   G  PD  T + +   L++
Sbjct: 642 FQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701

Query: 555 GG 556
            G
Sbjct: 702 QG 703



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 187/405 (46%), Gaps = 1/405 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L     TY  +++     G    +  + D M  +G  PN  +    + +  + GK D A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + S+ R   +   T  Y +++  L K    ++A+  F++       P    +N LI  L
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
               +  KA E   +M   G   D + +N++I   C+   V    +L  ++  +    PD
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPD 513

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           ++TY+++I GYC  GKMD+AT +   M S G+KP  VT+N LI+G+ K+  M  A  +  
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M S G  PD++T++ ++ G  +  +     +L   +        + T+ I+++ LCK N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
             ++A R  + L   DL  +   +N +I    K G  DEA  + A +      PD  T++
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++      +G + E   +F  M   GC  +   +NS++  LL+ G
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 168/391 (42%), Gaps = 37/391 (9%)

Query: 137 KLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K+    L FS++    LN    TY  V+  LC+ G  +     F+ M  +   P + +  
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + S     K D AK L+ +     + + T  +NS++++  K+    E+  +F    R+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +PD  T++ LI G    G++ +A +    M S G  PD VTYNTLI+G C+++ +   
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             L +E++  S  SPD++TY  ++ G  +  +   A  +Y  +   G +    T+N+++ 
Sbjct: 569 LVLFREME-SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G                                    C+N   ++ L++   +   +L  
Sbjct: 628 GL-----------------------------------CKNNLTDEALRMFQNLCLTDLQL 652

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
              TF I+I AL K  R ++A+     L  N LVP    Y+ + +   + G ++E + + 
Sbjct: 653 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLF 712

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             MEE  C  +      ++     +G +  A
Sbjct: 713 LSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 150/340 (44%), Gaps = 19/340 (5%)

Query: 119 EKLSP--------LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           E+LSP        ++SL +  + D  K     LE     + L+  F  +N ++ S C+ G
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKE--LILEMLDRGICLDTIF--FNSIIDSHCKEG 493

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                + +FD M   G  P+       +     AGK D A  LL+      +      YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           +L+N   K +  ++A+ +F+E       PD  T+NI++QGL +      A E +  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   ++ TYN ++ GLC+ N       + + +   ++   +  T+  +I    K+G+ D+
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL-TDLQLETRTFNIMIGALLKVGRNDE 672

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  ++  +++ G+ P   T++++ +   + G +   + +   M   G   +    +S++ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 411 GYCRNGQLNQG---LKLCDEMKGKNLSPNVYTFTILINAL 447
              + G + +    L + DE   K+ S    T ++ ++ L
Sbjct: 733 KLLQRGDITRAGTYLFMIDE---KHFSLEASTASLFLDLL 769



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
           DE+  +    ++Y     +  + + +      R+  + +   +++ P    Y  +I   C
Sbjct: 43  DELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCC 102

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
            AG +D     +  + +K  + D + FT L+ G C   R  +A+ I   +M ++GC P+ 
Sbjct: 103 CAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
            + N L+  L       EA  ++Q   +D
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDD 191


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 14/412 (3%)

Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL----LSQ 216
           +++ LC +    D++ +V   M   G +PN      F  + +  G CD  +      L Q
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPN-----VFSYNILLKGLCDENRSQEALELLQ 186

Query: 217 FRP---GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             P   G+       Y +++N   K+ + D+A   + E       P+  T++ +I  L +
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK 246

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              + KA E    M   G  P+  TYN+++ G C   +       LK++       PDVV
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH-SDGVEPDVV 305

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S++   CK G+  +A  +++ M   G+KP   T+  L+ G+   G +V    + + M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  P+   FS LI  Y + G+++Q + +  +M+ + L+P+  T+  +I  LCK  R+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA R+ +Q+    L P   +YN +I   C     D+A  ++ EM ++    D + F  +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I  HC +GR++E+  +F+ M+RIG  PD IT ++LI      G  +EA +++
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 192/394 (48%), Gaps = 3/394 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN++++ LC+         +   M  DG    P+       ++   + G  D A G   
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  +   Y+S++ AL K    D+A+ +     +    P+  T+N ++ G    G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + K+A  F   M S G  PD+VTYN+L+  LC+        ++   +  K    P++ TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT-KRGLKPEITTY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ GY   G + +  G+ + M   GI P+   F++LI  + K G +  A  +  +M  
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD VT+ ++I   C++G++   ++  ++M  + LSP    +  LI++LC  ++ + 
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+  + ++    +      +N +ID  CK G V E+  +   M     KPD +T++ LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           G+C+ G+M EA  +   M+ +G  PD +T N+LI
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 189/439 (43%), Gaps = 36/439 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ +LC+    D    V   M  +G +PN       V     +G+   A G L + 
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS----- 272
               V      YNSL++ L K     EA  MF    +   +P+  T+  L+QG +     
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 273 ------------------------------RIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                         + G+V +A   F  M   G +PD VTY T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I  LC+   V       +++      SP  + Y S+I   C   K DKA  +  EM   G
Sbjct: 416 IGILCKSGRVEDAMRYFEQM-IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I    + FN +ID   K G ++ +E + + M+  G  PD++T+S+LIDGYC  G++++  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL   M    + P+  T+  LIN  CK +R+ DA    ++++ + + P    YN ++ G 
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            +      A  +   + E   + +  T+ I++ G C      EA+ +F  +       + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 543 ITVNSLISCLLKGGMPNEA 561
            T N +I  LLK G  +EA
Sbjct: 655 RTFNIMIGALLKVGRNDEA 673



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 169/327 (51%), Gaps = 6/327 (1%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF-FYDMGSFGCSPDIVTYNTLISGL 306
           + K+ FR+    D   F  L++GL        A +     M   GC P++ +YN L+ GL
Sbjct: 117 VIKKGFRV----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGL 172

Query: 307 CRVNEVARGHELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           C  N      ELL+ +     +  PDVV+YT+VI+G+ K G +DKA G Y+EM   GI P
Sbjct: 173 CDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILP 232

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           + VT++ +I    K   M  A  +   M+  G +P+  T++S++ GYC +GQ  + +   
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            +M    + P+V T+  L++ LCK  R  +AR+    +    L P+   Y  ++ G+   
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G + E + ++  M      P+   F+ILI  +  +G++ +A+ +F+KM + G  PD +T 
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQ 572
            ++I  L K G   +A R  ++  +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDER 439



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 188/399 (47%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M  LC+ G     + +FD M   G  P        +      G      GLL   
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + ++++ L+ A  KQ   D+A+ +F +  +    PDT T+  +I  L + G V
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A  +F  M     SP  + YN+LI  LC  ++  +  EL+ E+        D + + S
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM-LDRGICLDTIFFNS 484

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK G++ ++  +++ M   G+KP  +T++ LIDG+   G M  A  +   M+S G
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+++LI+GYC+  ++   L L  EM+   +SP++ T+ I++  L +  R   A+
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  +    +   YN ++ G CK    DEA  +   +     + +  TF I+I   
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 664

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
              GR  EA  +F  +   G  PD  T + +   L++ G
Sbjct: 665 LKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 187/405 (46%), Gaps = 1/405 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L     TY  +++     G    +  + D M  +G  PN  +    + +  + GK D A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + S+ R   +   T  Y +++  L K    ++A+  F++       P    +N LI  L
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
               +  KA E   +M   G   D + +N++I   C+   V    +L  ++  +    PD
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPD 513

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           ++TY+++I GYC  GKMD+AT +   M S G+KP  VT+N LI+G+ K+  M  A  +  
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M S G  PD++T++ ++ G  +  +     +L   +        + T+ I+++ LCK N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
             ++A R  + L   DL  +   +N +I    K G  DEA  + A +      PD  T++
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++      +G + E   +F  M   GC  +   +NS++  LL+ G
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 168/391 (42%), Gaps = 37/391 (9%)

Query: 137 KLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           K+    L FS++    LN    TY  V+  LC+ G  +     F+ M  +   P + +  
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + S     K D AK L+ +     + + T  +NS++++  K+    E+  +F    R+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +PD  T++ LI G    G++ +A +    M S G  PD VTYNTLI+G C+++ +   
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             L +E++  S  SPD++TY  ++ G  +  +   A  +Y  +   G +    T+N+++ 
Sbjct: 569 LVLFREME-SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
           G                                    C+N   ++ L++   +   +L  
Sbjct: 628 GL-----------------------------------CKNNLTDEALRMFQNLCLTDLQL 652

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
              TF I+I AL K  R ++A+     L  N LVP    Y+ + +   + G ++E + + 
Sbjct: 653 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLF 712

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             MEE  C  +      ++     +G +  A
Sbjct: 713 LSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/337 (21%), Positives = 147/337 (43%), Gaps = 13/337 (3%)

Query: 119 EKLSP--------LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           E+LSP        ++SL +  + D  K     LE     + L+  F  +N ++ S C+ G
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKE--LILEMLDRGICLDTIF--FNSIIDSHCKEG 493

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
                + +FD M   G  P+       +     AGK D A  LL+      +      YN
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYN 553

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           +L+N   K +  ++A+ +F+E       PD  T+NI++QGL +      A E +  +   
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES 613

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   ++ TYN ++ GLC+ N       + + +   ++   +  T+  +I    K+G+ D+
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL-TDLQLETRTFNIMIGALLKVGRNDE 672

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  ++  +++ G+ P   T++++ +   + G +   + +   M   G   +    +S++ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              + G + +       +  K+ S    T ++ ++ L
Sbjct: 733 KLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
           DE+  +    ++Y     +  + + +      R+  + +   +++ P    Y  +I   C
Sbjct: 43  DELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCC 102

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
            AG +D     +  + +K  + D + FT L+ G C   R  +A+ I   +M ++GC P+ 
Sbjct: 103 CAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
            + N L+  L       EA  ++Q   +D
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDD 191


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 180/376 (47%), Gaps = 3/376 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C  G       + D M+S    P+       +  C   G    AK L+ Q 
Sbjct: 312 TYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQM 371

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
               V  +   +N  L  L K+   +E     KE   ++   PD  T++ LI+   ++G+
Sbjct: 372 ENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGD 431

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +  A E   +MG  G   + +T NT++  LC+  +V   H LL +   K  +  D VTY 
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLL-DSAHKRGYIVDEVTYG 490

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I GY +  K++KA  +++EM    I P+  TFN LI G    G    A    + +   
Sbjct: 491 TLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAES 550

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G LPD  TF+S+I GYC+ G++ +  +  +E    +  P+ YT  IL+N LCKE     A
Sbjct: 551 GLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             F   L     V     YN +I  FCK   + EA  +++EMEEKR +PD+ T+  +I  
Sbjct: 611 LNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITS 669

Query: 517 HCMKGRMVEAISIFNK 532
               G++ EA  +  K
Sbjct: 670 LMEDGKLSEADELLKK 685



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 202/434 (46%), Gaps = 1/434 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L  LE      ++N    TYN +++++ + G    V+ +   M+ +G +PN       V
Sbjct: 223 ALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLV 282

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
               + G    A  ++   +   +      YN L+N +    +  E + +      L  Q
Sbjct: 283 YGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQ 342

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  T+N LI G   +G   +A +    M + G  P+ VT+N  +  LC+  +       
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRK 402

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +KE+     FSPD+VTY ++I  Y K+G +  A  +  EM   GIK + +T N ++D   
Sbjct: 403 VKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   +  A  + +     GY+ D VT+ +LI GY R  ++ +  ++ DEMK   ++P V 
Sbjct: 463 KERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVT 522

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TF  LI  LC   +   A     +L  + L+P    +N +I G+CK G V++A     E 
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNES 582

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +   KPD  T  IL+ G C +G   +A++ FN ++      D +T N++IS   K    
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI-TEREVDTVTYNTMISAFCKDKKL 641

Query: 559 NEAFRIMQRASEDQ 572
            EA+ ++    E +
Sbjct: 642 KEAYDLLSEMEEKR 655



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 192/397 (48%), Gaps = 13/397 (3%)

Query: 174 SVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL----SQFR--PGEVTMSTF 227
           S + VFD M   G   +       V+     GK + A G+L    S+F   P  VT    
Sbjct: 187 SAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVT---- 242

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            YN++L A+ K+    +   +  +  R    P+  T+N L+ G  ++G +K+AF+    M
Sbjct: 243 -YNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
                 PD+ TYN LI+G+C    +  G EL+  +K   +  PDVVTY ++I G  +LG 
Sbjct: 302 KQTNILPDLCTYNILINGVCNAGSIREGLELMDVMK-SLKLQPDVVTYNTLIDGCFELGL 360

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS-AEYMRERMLSFGYLPDVVTFS 406
             +A  +  +M + G+KP+ VT N+ +    K          ++E +   G+ PD+VT+ 
Sbjct: 361 SLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYH 420

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +LI  Y + G L+  L++  EM  K +  N  T   +++ALCKE ++++A   L      
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKR 480

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             +     Y  +I G+ +   V++A  +  EM+  +  P   TF  LI G C  G+   A
Sbjct: 481 GYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELA 540

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           +  F+++   G  PDD T NS+I    K G   +AF 
Sbjct: 541 MEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFE 577



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 179/349 (51%), Gaps = 6/349 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE---VKKAF 281
           S  +++  L+A +       A+ +F++  RL  +P+  T N L+ GL R      +  A 
Sbjct: 130 SKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAR 189

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           E F DM   G S D+ T+N L++G C   ++     +L+ +  +   +PD VTY +++  
Sbjct: 190 EVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKA 249

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
             K G++     +  +M   G+ P+ VT+N L+ G+ K+G++  A  + E M     LPD
Sbjct: 250 MSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPD 309

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN-DARRFL 460
           + T++ LI+G C  G + +GL+L D MK   L P+V T+  LI+  C E  L+ +A++ +
Sbjct: 310 LCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDG-CFELGLSLEAKKLM 368

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC-KPDKVTFTILIIGHCM 519
           +Q++ + + P    +N  +   CK    +E    V E+ E     PD VT+  LI  +  
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            G +  A+ +  +M + G   + IT+N+++  L K    +EA  ++  A
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSA 477



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 172/363 (47%), Gaps = 38/363 (10%)

Query: 158 TYNLVMRSLCEMGLHDSV-QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N+ ++ LC+    + V + V + +   G  P+       + + ++ G    A  ++ +
Sbjct: 382 THNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + M+T   N++L+AL K+   DEA  +     +     D  T+  LI G  R  +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEK 501

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V+KAFE + +M     +P + T+N+LI GLC   +     E   E+  +S   PD  T+ 
Sbjct: 502 VEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELA-ESGLLPDDCTFN 560

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I GYCK G+++KA   YNE      KP   T N+L++G  K G       M E+ L+F
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG-------MTEKALNF 613

Query: 397 ------GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
                     D VT++++I  +C++ +L +   L  EM+ K L P+ +T+  +I +L ++
Sbjct: 614 FNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMED 673

Query: 451 NRLNDARRFLKQ-------LKWN----------------DLVPKPFMYNPVIDGFCKAGN 487
            +L++A   LK+       +K N                +L  +   Y+ VI+  C  G 
Sbjct: 674 GKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGR 733

Query: 488 VDE 490
           + E
Sbjct: 734 LKE 736



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 183/392 (46%), Gaps = 27/392 (6%)

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           SD  LP   ++   +S    A   DA   L+S  R  + ++S      L N+L+  N   
Sbjct: 75  SDSPLPLLSVVRSLLSHHKFA---DAKSLLVSYIRTSDASLS------LCNSLLHPN--- 122

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
                      L   P    F+I +      G+   A + F  M      P+++T NTL+
Sbjct: 123 ---------LHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLL 173

Query: 304 SGLCRVN---EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            GL R      +A   E+  ++  K   S DV T+  +++GYC  GK++ A G+   M S
Sbjct: 174 IGLVRYPSSFSIASAREVFDDM-VKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVS 232

Query: 361 -CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
              + P  VT+N ++    K G +   + +   M   G +P+ VT+++L+ GYC+ G L 
Sbjct: 233 EFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLK 292

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +  ++ + MK  N+ P++ T+ ILIN +C    + +    +  +K   L P    YN +I
Sbjct: 293 EAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLI 352

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI-GC 538
           DG  + G   EA  ++ +ME    KP++VT  I +   C + +  E      +++ + G 
Sbjct: 353 DGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGF 412

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +PD +T ++LI   LK G  + A  +M+   +
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 128/246 (52%), Gaps = 4/246 (1%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P    +   +S Y   GK   A  ++ +M    +KP+ +T N L+ G  +  +  S    
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 390 RE---RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILIN 445
           RE    M+  G   DV TF+ L++GYC  G+L   L + + M  + N++P+  T+  ++ 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           A+ K+ RL+D +  L  +K N LVP    YN ++ G+CK G++ EA  IV  M++    P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           D  T+ ILI G C  G + E + + + M  +   PD +T N+LI    + G+  EA ++M
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 566 QRASED 571
           ++   D
Sbjct: 369 EQMEND 374


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 222/480 (46%), Gaps = 35/480 (7%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           LE ++  D  +      EF +  + +     TY  + ++L   G    +  V + MR  G
Sbjct: 129 LEFLRVHDKVEDMAAVFEFMQKKI-IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
            + N+      +   I++G C  A  +  +     +  S   Y++L+ AL K+ +++  +
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            + KE   L  +P+ +TF I I+ L R G++ +A+E F  M   GC PD+VTY  LI  L
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 307 CRVNEVARGHELLKEVK--------------------------FKSEFS--------PDV 332
           C   ++    EL  ++K                          FK  +S        PDV
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VT+T ++   CK    D+A   ++ M   GI P+  T+N LI G  + G +  A  +   
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGT 427

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M S G  P   T++  ID + ++G+  + ++  ++MK K + PN+      + +L +  R
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L +A+     L+ N L P    YN ++  + K G VDEA  +++EM    C+PD +    
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           LI      GR+ EA  +F++M  +  +P  +T N+L+S L K G   +A  + +   E +
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 212/457 (46%), Gaps = 16/457 (3%)

Query: 108 YLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLC 167
           Y    C R L        + E+ +R+D+   G   +              TY +++ +LC
Sbjct: 263 YTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV--------------TYTVLIDALC 308

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
             G  ++ + +F  M+++GH P+  +    +      G  D  K   SQ           
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVV 368

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            +  L++ L K  + DEA   F    +    P+  T+N LI GL R G ++ A +    M
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM 428

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            S G  P   TYN  I    +  E  +  E  +++K K    P++V   + +    ++G+
Sbjct: 429 ESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKG-IVPNIVACNASLYSLAEMGR 487

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           + +A  ++N +   G+ P +VT+N+++  + KVG +  A  +   M+  G  PDV+  +S
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LID   + G++++  ++ D MK   LSP V T+  L++ L KE R+  A    + +    
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    +N ++D FCK   V+ A  + ++M    CKPD +T+  +I G   + ++  A 
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             F++ L+    PD +T+ +L+  L+K G   +A  I
Sbjct: 668 WFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISI 703



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 176/313 (56%), Gaps = 1/313 (0%)

Query: 229  YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
            YN L+  L++ +  ++A  +FK+   +   PD +TFN+L+    + G++ + FE + +M 
Sbjct: 791  YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850

Query: 289  SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
            S  C PD +TYN +IS L + N + +  +   ++   S+F P   TY  +I G  K+G++
Sbjct: 851  SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL-VSSDFRPTPRTYGPLIDGLAKVGRL 909

Query: 349  DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            ++A  ++ EM+  G KP+   FN+LI+G+GK+G+  +A  + +RM++ G  PD+ +++ L
Sbjct: 910  EEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 409  IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
            +D  C  G++++ L   +E+K   L P+   +  +IN L K  R+ +A     +++   +
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGI 1029

Query: 469  VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            VP  + YN ++     AG V++A  +  E++    +PD  T+  LI G+ +      A +
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYT 1089

Query: 529  IFNKMLRIGCAPD 541
            ++  M+  GC P+
Sbjct: 1090 VYKNMMVDGCNPN 1102



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 232/490 (47%), Gaps = 44/490 (8%)

Query: 120 KLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ--- 176
           ++S    L V+K + +P   L +        ++ H+ +T N ++  L    +HD V+   
Sbjct: 86  RVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFL---RVHDKVEDMA 142

Query: 177 VVFDYMRSDGHLPN-SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
            VF++M+      +    +  F +  IR G       +L++ R     ++ + YN L++ 
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGG-LRQMTTVLNKMRKAGFVLNAYSYNGLIHL 201

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L++     EA+ +++       +P   T++ L+  L +  + +       +M   G  P+
Sbjct: 202 LIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPN 261

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           + T+   I  L R  ++   +E+ + +       PD+VTYT +I   C  G+++ A  ++
Sbjct: 262 VYTFTICIRVLGRAGKIDEAYEIFRRMD-DEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            +M + G KP  V +  L+D F   G++ + +    +M + GY+PDVVTF+ L+D  C+ 
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
              ++     D M+ + + PN++T+  LI  L +  R+ DA + L  ++   + P  + Y
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440

Query: 476 NPVIDGFCKAGNVDEA--------------NVI--------VAEM-------------EE 500
           N  ID F K+G   +A              N++        +AEM              E
Sbjct: 441 NIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
               PD VT+ +++  +   G++ EA+++ ++M+R GC PD I VNSLI  L K G  +E
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560

Query: 561 AFRIMQRASE 570
           A+++  R  +
Sbjct: 561 AWQMFDRMKD 570



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 200/422 (47%), Gaps = 1/422 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  L  S KTY+ +M +L +    + V V+   M   G  PN       +    RAGK 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  +  +            Y  L++AL      + A  +F +      +PD   +  L
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +   +  G++    EF+  M + G  PD+VT+  L+  LC+  +         +V  K  
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF-DVMRKQG 397

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P++ TY ++I G  + G+++ A  +   M S G++P+A T+N+ ID FGK G    A 
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAV 457

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              E+M + G +P++V  ++ +      G+L +   + + ++   L+P+  T+ +++   
Sbjct: 458 ETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY 517

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            K  ++++A   L ++  N   P   + N +ID   KAG VDEA  +   M++ +  P  
Sbjct: 518 SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+  L+ G   +GR+ +AI +F  M+   C+P+ I+ N+L+ C  K      A ++  +
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSK 637

Query: 568 AS 569
            +
Sbjct: 638 MT 639



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 200/437 (45%), Gaps = 3/437 (0%)

Query: 137  KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIE 195
            K+   F  F ++  S++    T   ++  L + G + D++ +  D+M       N    E
Sbjct: 662  KVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721

Query: 196  FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR- 254
              +   +   + D A     +     +         L+  L K      A  +F ++ + 
Sbjct: 722  DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781

Query: 255  LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
            L   P   ++N LI  L  +   +KA++ F DM + GC+PD  T+N L++   +  ++  
Sbjct: 782  LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841

Query: 315  GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              EL KE+       PD +TY  VIS   K   +DKA   + ++ S   +P+  T+  LI
Sbjct: 842  LFELYKEM-ISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900

Query: 375  DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            DG  KVG +  A  + E M  +G  P+   F+ LI+GY + G      +L   M  + + 
Sbjct: 901  DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 435  PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
            P++ ++TIL++ LC   R+++A  +  +LK   L P    YN +I+G  K+  ++EA  +
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 495  VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              EM  +   PD  T+  L++   + G + +A  ++ ++   G  PD  T N+LI     
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSL 1080

Query: 555  GGMPNEAFRIMQRASED 571
               P  A+ + +    D
Sbjct: 1081 SENPEHAYTVYKNMMVD 1097



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 163/355 (45%), Gaps = 6/355 (1%)

Query: 162  VMRSLCEMGLHDSVQVVFD-YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
            ++R LC+         +FD + +  G  P        +   +     + A  L    +  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 221  EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
                  F +N LL    K     E   ++KE      +PD  T+NI+I  L++   + KA
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 281  FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSV 338
             +FFYD+ S    P   TY  LI GL +V  +     L +E+   S++   P+   +  +
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM---SDYGCKPNCAIFNIL 934

Query: 339  ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
            I+GY K+G  + A  ++  M + GI+P   ++ +L+D     G +  A Y    + S G 
Sbjct: 935  INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 399  LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             PD + ++ +I+G  ++ ++ + L L +EM+ + + P++YT+  L+  L     +  A+R
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 459  FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
              ++L+   L P  F YN +I G+  + N + A  +   M    C P+  T+  L
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 11/293 (3%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
            T+N+++    + G    +  ++  M S    P++      +SS  ++   D A       
Sbjct: 825  TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL 884

Query: 215  --SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
              S FRP   T     Y  L++ L K    +EA+ +F+E      +P+   FNILI G  
Sbjct: 885  VSSDFRPTPRT-----YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 273  RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            +IG+ + A + F  M + G  PD+ +Y  L+  LC    V        E+K  +   PD 
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK-STGLDPDF 998

Query: 333  VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            + Y  +I+G  K  +M++A  +YNEM + GI P   T+N L+   G  G +  A+ M E 
Sbjct: 999  IAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEE 1058

Query: 393  MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
            +   G  PDV T+++LI GY  +        +   M     +PN+ T+  L N
Sbjct: 1059 LQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 74/155 (47%)

Query: 148  VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
            VN  +    K+Y +++  LC  G  D     F+ ++S G  P+       ++   ++ + 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 208  DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            + A  L ++ R   +    + YNSL+  L      ++A  M++E      +PD +T+N L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 268  IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            I+G S     + A+  + +M   GC+P+I TY  L
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 207/450 (46%), Gaps = 36/450 (8%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            ++YN ++ +L E    D  +  F Y  + G  PN       +    R  + D AK LL+
Sbjct: 114 IRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLN 173

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                  +   F Y +L+N+L K     +A+ +F E       PD   +NILI G  + G
Sbjct: 174 WMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233

Query: 276 EVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           ++  A E +  +       P+I +YN +I+GLC+  +     E+   +K K+E   D+ T
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK-KNERGQDLYT 292

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y+++I G C  G +D AT +Y EM   G+ P  V +N +++G+ + G +     + + M 
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 395 SFG----------------------------YLP------DVVTFSSLIDGYCRNGQLNQ 420
             G                             LP      D +T+  L+ G C+NG LN+
Sbjct: 353 KEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNK 412

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L + +E +      + + ++ +IN LC+E RL++    L Q+  +   P P + N VI+
Sbjct: 413 ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVIN 472

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           GF +A  +++A      M  K C P  VT+  LI G     R  EA ++  +ML  G  P
Sbjct: 473 GFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + IT + L++ L +G   + A  +  +A E
Sbjct: 533 NMITYSLLMNGLCQGKKLDMALNLWCQALE 562



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++  LC+ G  D    ++  M+ +    +       +     +G  D A  +  + 
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 316

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V+    +YN++LN  ++    +E + ++K   +   +    ++NILI+GL    +V
Sbjct: 317 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKV 375

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   +  +    C  D +TY  L+ GLC+   + +   +L+E +       D   Y+S
Sbjct: 376 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE-NGRGDLDTFAYSS 434

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C+ G++D+  G+ ++M   G KP+    N +I+GF +   +  A      M+S G
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT+++LI+G  +  + ++   L  EM  K   PN+ T+++L+N LC+  +L+ A 
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               Q       P   M+N +I G C +G V++A  + +EM++++C P+ VT   L+ G 
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD----DITVNSLISC 551
                   A  I++ +L+ G  PD    +IT+  L SC
Sbjct: 615 YKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSC 652



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 214/459 (46%), Gaps = 40/459 (8%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FL F  + LS N   +TYN++++  C     D  + + ++M   G  P+       ++S 
Sbjct: 137 FLYFETMGLSPN--LQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPD 260
            + G    A  L  +     VT     YN L++   K+ +   A  +++   +  S  P+
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPN 254

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             ++N++I GL + G+  ++FE ++ M       D+ TY+TLI GLC    +     + K
Sbjct: 255 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 314

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF--- 377
           E+  ++  SPDVV Y ++++GY + G++++   ++  M   G + + V++N+LI G    
Sbjct: 315 EMA-ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFEN 372

Query: 378 GKVGNMVSA-EYMRER---------------MLSFGYLP----------------DVVTF 405
            KV   +S  E + E+               +   GYL                 D   +
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           SS+I+G CR G+L++   + D+M      PN +    +IN   + ++L DA RF   +  
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
               P    YN +I+G  KA    EA  +V EM  K  KP+ +T+++L+ G C   ++  
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           A++++ + L  G  PD    N +I  L   G   +A ++
Sbjct: 553 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 190/399 (47%), Gaps = 2/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC  G  D    V+  M  +G  P+  +    ++  +RAG+ +    L    
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E   +   YN L+  L +    DEA+ +++         D+ T+ +L+ GL + G +
Sbjct: 352 EK-EGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA     +  +     D   Y+++I+GLCR   +     +L ++  K    P+     +
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT-KHGCKPNPHVCNA 469

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+G+ +  K++ A   +  M S G  P+ VT+N LI+G  K      A  + + ML  G
Sbjct: 470 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + P+++T+S L++G C+  +L+  L L  +   K   P+V    I+I+ LC   ++ DA 
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++K    VP    +N +++GF K  + + A+ I   + +   +PD +++ I + G 
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGL 649

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C   R+ +A+   N  +  G  P  IT N L+  +L  G
Sbjct: 650 CSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 210/459 (45%), Gaps = 10/459 (2%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSR-VNLSLNHSFKTYN----LVMRS 165
           D+  R+     +P     ++KRL +PKL       SR V L      K        V+++
Sbjct: 31  DSVTRFPGYSHTPYVFHHILKRLFDPKL---VAHVSRIVELIRTQKCKCPEDVALTVIKA 87

Query: 166 LCEMGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
             +  + D    +F  M    G  P        +++ I + K D A+     F    ++ 
Sbjct: 88  YAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSP 147

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +   YN L+    ++   D+A  +    +     PD +++  LI  L++ G +  A + F
Sbjct: 148 NLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLF 207

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G +PD+  YN LI G  +  ++    E+ + +       P++ +Y  +I+G CK
Sbjct: 208 DEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCK 267

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK D++  I++ M          T++ LI G    GN+  A  + + M   G  PDVV 
Sbjct: 268 CGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVV 327

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++++++GY R G++ + L+L   M+ K     V ++ ILI  L +  ++++A    + L 
Sbjct: 328 YNTMLNGYLRAGRIEECLELWKVME-KEGCRTVVSYNILIRGLFENAKVDEAISIWELLP 386

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
             D       Y  ++ G CK G +++A  I+ E E  R   D   ++ +I G C +GR+ 
Sbjct: 387 EKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLD 446

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           E   + ++M + GC P+    N++I+  ++     +A R
Sbjct: 447 EVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALR 485



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 1/162 (0%)

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           ++I  Y +N   +Q L +   M       P + ++  L+NAL + N+ ++A  F    + 
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
             L P    YN +I   C+    D+A  ++  M E+   PD  ++  LI      G M +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           A+ +F++M   G  PD    N LI    K G    A  I +R
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 244


>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 755

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 201/391 (51%), Gaps = 7/391 (1%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           +LV   L   GL  + + V ++M S G   N+ ++  F+      G  D    LL   + 
Sbjct: 308 SLVEEILRAHGLELAREFV-EHMLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKD 366

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +      +   ++ L K     EA   +FK      SQ D+ + + +I G  ++G+ +
Sbjct: 367 YGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQ-DSVSVSSVIDGFCKVGKPE 425

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A +  +   SF   P+I  Y++ +S +C   ++ R   + +E+ F+    PD   YT++
Sbjct: 426 EAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEI-FELGLLPDCYCYTTM 481

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYC LG+ DKA   +  +   G  PS +T+ +LI    K G++  AE +   M + G 
Sbjct: 482 IDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGL 541

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PDVVT+++L+ GY +  QLN+  +L DEM+   +SP+V T+ ILI+++     +++A  
Sbjct: 542 HPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANE 601

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            + +L     VP    +  VI G  K G+  EA ++   M + R KPD VT + L+ G+C
Sbjct: 602 IISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYC 661

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
              RM +AI +F+K+L  G  PD +  N+LI
Sbjct: 662 RAQRMEKAIVLFDKLLDAGLKPDVVLYNTLI 692



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 175/360 (48%), Gaps = 6/360 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            + + +  LC+ G L ++  V+F  ++  G   +S  +   +    + GK + A  L+  
Sbjct: 375 AFTVFIDKLCKAGFLREATSVLFK-LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS 433

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           FR   +  + F+Y+S L+ +    +   A  +F+E F L   PD + +  +I G   +G 
Sbjct: 434 FR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGR 490

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             KAF+FF  +   G  P ++TY  LI    +   ++    + + +K +    PDVVTY 
Sbjct: 491 TDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEG-LHPDVVTYN 549

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ GY K  +++K   + +EM S GI P   T+N+LI      G +  A  +   ++  
Sbjct: 550 NLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRR 609

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G++P  + F+ +I G  + G   +   L   M    + P+V T + L++  C+  R+  A
Sbjct: 610 GFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKA 669

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                +L    L P   +YN +I G+C  G++++A  ++  M ++   P++ T   L++G
Sbjct: 670 IVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVG 729



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 169/366 (46%), Gaps = 4/366 (1%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +  CI+  K D A  L  +     +  S  +  SL+  +++ +  + A    +      
Sbjct: 274 LIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHMLSRG 333

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
              +    ++ I+     G   K +E    M  +G  PDIV +   I  LC+   +    
Sbjct: 334 RHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREAT 393

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            +L ++K     S D V+ +SVI G+CK+GK ++A  +   ++S  ++P+   ++  +  
Sbjct: 394 SVLFKLKLFG-ISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSN 449

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
               G+M+ A  + + +   G LPD   ++++IDGYC  G+ ++  +    +      P+
Sbjct: 450 ICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPS 509

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           + T+T+LI A  K   ++DA    + +K   L P    YN ++ G+ K   +++   ++ 
Sbjct: 510 LITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELID 569

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM      PD  T+ ILI    ++G + EA  I ++++R G  P  +    +I  L K G
Sbjct: 570 EMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRG 629

Query: 557 MPNEAF 562
              EAF
Sbjct: 630 DFQEAF 635



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 133/304 (43%), Gaps = 7/304 (2%)

Query: 150 LSLNHSFK------TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           + L HSF+       Y+  + ++C  G       +F  +   G LP+       +     
Sbjct: 428 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCT 487

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G+ D A              S   Y  L+ A  K  +  +A  +F+        PD  T
Sbjct: 488 LGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVT 547

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N L+ G  +  ++ K FE   +M S G SPD+ TYN LI  +     V   +E++ E+ 
Sbjct: 548 YNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISEL- 606

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +  F P  + +T VI G  K G   +A  ++  M    +KP  VT + L+ G+ +   M
Sbjct: 607 IRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRM 666

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + +++L  G  PDVV +++LI GYC  G + +  +L   M  + + PN  T   L
Sbjct: 667 EKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 726

Query: 444 INAL 447
           +  L
Sbjct: 727 VVGL 730



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 192/455 (42%), Gaps = 34/455 (7%)

Query: 122 SPLNSLEVIKRLDN-------PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           + L+   VI+ LD+         + L F  +S + + + HS        RS+  M +H  
Sbjct: 172 TELDQYNVIRILDDLFEETLDASIALYFFRWSELWIGVAHS-------SRSISRM-IHIL 223

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMYN 230
           V    +Y   D       M+   V  C  +GK    C   K L        V  + F   
Sbjct: 224 VSGNMNYRAVD-------MLLCLVKKC--SGKERSLCLVIKDLFETRIDRRVLETVFCM- 273

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            L++  +K+   D A+ +  +  +    P       L++ + R   ++ A EF   M S 
Sbjct: 274 -LIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHMLSR 332

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   +    +  I   C      +G ELL  +K      PD+V +T  I   CK G + +
Sbjct: 333 GRHLNAALLSLFIRKYCSDGYFDKGWELLMGMK-DYGIRPDIVAFTVFIDKLCKAGFLRE 391

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           AT +  ++   GI   +V+ + +IDGF KVG     E   + + SF   P++  +SS + 
Sbjct: 392 ATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK---PEEAIKLIHSFRLRPNIFVYSSFLS 448

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
             C  G + +   +  E+    L P+ Y +T +I+  C   R + A +F   L  +   P
Sbjct: 449 NICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPP 508

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  +I    K G++ +A  +   M+ +   PD VT+  L+ G+    ++ +   + 
Sbjct: 509 SLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELI 568

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           ++M   G +PD  T N LI  ++  G  +EA  I+
Sbjct: 569 DEMRSAGISPDVATYNILIHSMVVRGYVDEANEII 603



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 1/234 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY L++ +  + G     + VF  M+++G  P+       +    +  + +    L+
Sbjct: 509 SLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELI 568

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + R   ++     YN L++++V +   DEA  +  E  R    P    F  +I GLS+ 
Sbjct: 569 DEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKR 628

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+ ++AF  ++ M      PD+VT + L+ G CR   + +   L  ++   +   PDVV 
Sbjct: 629 GDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKL-LDAGLKPDVVL 687

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           Y ++I GYC +G ++KA  +   M   G+ P+  T + L+ G      M S E+
Sbjct: 688 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVGLEGKRFMNSEEH 741


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 226/513 (44%), Gaps = 83/513 (16%)

Query: 132 RLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           R  N + G + L E  + N+ +  S  TY  V++ +C  G  D    +   M + G  PN
Sbjct: 394 REKNVRQGYELLVEMKKRNIVI--SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             +    + + ++  +   A  +L + +   +    F YNSL+  L K    DEA     
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP---------------- 294
           E      +P+ +T+   I G     E   A ++  +M   G  P                
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKE 571

Query: 295 -------------------DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
                              D  TY  L++GL + ++V    E+ +E++ K   +PDV +Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSY 630

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I+G+ KLG M KA+ I++EM   G+ P+ + +N+L+ GF + G +  A+ + + M  
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ VT+ ++IDGYC++G L +  +L DEMK K L P+ + +T L++  C   RLND
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLND 747

Query: 456 ARR------------------FLKQLKW--------------NDLV---------PKPFM 474
             R                  F   + W              N L+         P    
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +ID  CK GN++ A  +  +M+     P  +T+T L+ G+   GR  E   +F++ +
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             G  PD I  + +I+  LK GM  +A  ++ +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 246/529 (46%), Gaps = 26/529 (4%)

Query: 49  LFFTVRPSRVRASTIAAIAHFHGLANGGSRPFD---EKEVNYRCSNEF--WFVKVVCTLL 103
           LF+ V    V  + +  +  +H L     R  +    K+V ++   EF    + V   L 
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK 263

Query: 104 LRSSYLSDTCARYLCEKLSPL--------NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHS 155
           L+ S +        C+ L PL        + L  IKRL++ K  L  +E   + +SL++ 
Sbjct: 264 LKESMI--------CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLL--VEMDSLGVSLDN- 312

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             TY+L++  L +    D+ + +   M S G      M +  +    + G  + AK L  
Sbjct: 313 -HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                 +      Y SL+    ++ N  +   +  E  +       +T+  +++G+   G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++  A+    +M + GC P++V Y TLI    + +       +LKE+K +   +PD+  Y
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK-EQGIAPDIFCY 490

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            S+I G  K  +MD+A     EM   G+KP+A T+   I G+ +     SA+   + M  
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G LP+ V  + LI+ YC+  ++ +       M  + +  +  T+T+L+N L K ++++D
Sbjct: 551 CGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    ++++   + P  F Y  +I+GF K GN+ +A+ I  EM E+   P+ + + +L+ 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G C  G + +A  + ++M   G  P+ +T  ++I    K G   EAFR+
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 185/391 (47%), Gaps = 1/391 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+  +  + + G+ +  + +FD M + G +P +      +    R         LL + +
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + +S + Y +++  +    + D A  + KE      +P+   +  LI+   +     
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     +M   G +PDI  YN+LI GL +   +      L E+  ++   P+  TY + 
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAF 528

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ISGY +  +   A     EM  CG+ P+ V    LI+ + K   ++ A      M+  G 
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGI 588

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           L D  T++ L++G  +N +++   ++  EM+GK ++P+V+++ +LIN   K   +  A  
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++    L P   +YN ++ GFC++G +++A  ++ EM  K   P+ VT+  +I G+C
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             G + EA  +F++M   G  PD     +L+
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 194/445 (43%), Gaps = 56/445 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGL 213
           TY   +    E     S       MR  G LPN  +    ++   +  K    C A + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSM 583

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           + Q   G+       Y  L+N L K +  D+A  +F+E       PD +++ +LI G S+
Sbjct: 584 VDQGILGDAKT----YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G ++KA   F +M   G +P+++ YN L+ G CR  E+ +  ELL E+  K    P+ V
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-LHPNAV 698

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG-------------FG-- 378
           TY ++I GYCK G + +A  +++EM   G+ P +  +  L+DG             FG  
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758

Query: 379 -------------------KVGNMVSAEYMRERMLS-----FGYLPDVVTFSSLIDGYCR 414
                              K G       +  R++      FG  P+ VT++ +ID  C+
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCK 817

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G L    +L  +M+  NL P V T+T L+N   K  R  +      +     + P   M
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI-----LIIGHCMKGRMVEAISI 529
           Y+ +I+ F K G   +A V+V +M  K    D    +I     L+ G    G M  A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 530 FNKMLRIGCAPDDITVNSLI--SCL 552
              M+R+   PD  TV  LI  SC+
Sbjct: 938 MENMVRLQYIPDSATVIELINESCI 962



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 34/343 (9%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC--RVNEVARG- 315
           P  +T+++LI GL +I  ++ A     +M S G S D  TY+ LI GL   R  + A+G 
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334

Query: 316 -HELLKE----------------------VKFKSEFS--------PDVVTYTSVISGYCK 344
            HE++                         K K+ F         P    Y S+I GYC+
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
              + +   +  EM    I  S  T+  ++ G    G++  A  + + M++ G  P+VV 
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LI  + +N +    +++  EMK + ++P+++ +  LI  L K  R+++AR FL ++ 
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
            N L P  F Y   I G+ +A     A+  V EM E    P+KV  T LI  +C K +++
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVI 574

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           EA S +  M+  G   D  T   L++ L K    ++A  I + 
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 185/451 (41%), Gaps = 36/451 (7%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           KR+D+P   L F  +            +++ +   LC  G  +    V + M       N
Sbjct: 72  KRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE----RN 127

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
            P+ E + SS +R  +    K           +    ++  L +  + +   +EAV++F 
Sbjct: 128 WPVAEVW-SSIVRCSQEFVGK-----------SDDGVLFGILFDGYIAKGYIEEAVFVFS 175

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
               L   P      +L+  L R   +   ++ +  M       D+ TY+ LI   CR  
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235

Query: 311 EVARGHELL--KEVKFKSE------------------FSPDVVTYTSVISGYCKLGKMDK 350
            V  G ++L   E +F++                     P   TY  +I G CK+ +++ 
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +  EM+S G+     T+++LIDG  K  N  +A+ +   M+S G       +   I 
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
              + G + +   L D M    L P    +  LI   C+E  +      L ++K  ++V 
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
            P+ Y  V+ G C +G++D A  IV EM    C+P+ V +T LI       R  +A+ + 
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +M   G APD    NSLI  L K    +EA
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 226/513 (44%), Gaps = 83/513 (16%)

Query: 132 RLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           R  N + G + L E  + N+ +  S  TY  V++ +C  G  D    +   M + G  PN
Sbjct: 394 REKNVRQGYELLVEMKKRNIVI--SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             +    + + ++  +   A  +L + +   +    F YNSL+  L K    DEA     
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP---------------- 294
           E      +P+ +T+   I G     E   A ++  +M   G  P                
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 295 -------------------DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
                              D  TY  L++GL + ++V    E+ +E++ K   +PDV +Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSY 630

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I+G+ KLG M KA+ I++EM   G+ P+ + +N+L+ GF + G +  A+ + + M  
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ VT+ ++IDGYC++G L +  +L DEMK K L P+ + +T L++  C   RLND
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLND 747

Query: 456 ARR------------------FLKQLKW--------------NDLV---------PKPFM 474
             R                  F   + W              N L+         P    
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +ID  CK GN++ A  +  +M+     P  +T+T L+ G+   GR  E   +F++ +
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             G  PD I  + +I+  LK GM  +A  ++ +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 247/529 (46%), Gaps = 26/529 (4%)

Query: 49  LFFTVRPSRVRASTIAAIAHFHGLANGGSRPFD---EKEVNYRCSNEF--WFVKVVCTLL 103
           LF+ V    V  + +  +  +H L     R  +    K+V ++   EF    + V   L 
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK 263

Query: 104 LRSSYLSDTCARYLCEKLSPL--------NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHS 155
           L+ S +        C+ L PL        + L  IKRL++ K  L  +E   + +SL++ 
Sbjct: 264 LKESMI--------CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLL--VEMDSLGVSLDN- 312

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             TY+L++  L +    D+ + +   M S G      M +  +    + G  + AK L  
Sbjct: 313 -HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                 +      Y SL+    ++ N  +   +  E  +       +T+  +++G+   G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++  A+    +M + GC P++V Y TLI    + +       +LKE+K +   +PD+  Y
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK-EQGIAPDIFCY 490

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            S+I G  K  +MD+A     EM   G+KP+A T+   I G+ +     SA+   + M  
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G LP+ V  + LI+ YC+ G++ +       M  + +  +  T+T+L+N L K ++++D
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    ++++   + P  F Y  +I+GF K GN+ +A+ I  EM E+   P+ + + +L+ 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G C  G + +A  + ++M   G  P+ +T  ++I    K G   EAFR+
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 186/391 (47%), Gaps = 1/391 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+  +  + + G+ +  + +FD M + G +P +      +    R         LL + +
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + +S + Y +++  +    + D A  + KE      +P+   +  LI+   +     
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     +M   G +PDI  YN+LI GL +   +      L E+  ++   P+  TY + 
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAF 528

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ISGY +  +   A     EM  CG+ P+ V    LI+ + K G ++ A      M+  G 
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           L D  T++ L++G  +N +++   ++  EM+GK ++P+V+++ +LIN   K   +  A  
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++    L P   +YN ++ GFC++G +++A  ++ EM  K   P+ VT+  +I G+C
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             G + EA  +F++M   G  PD     +L+
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 195/445 (43%), Gaps = 56/445 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGL 213
           TY   +    E     S       MR  G LPN  +    ++   + GK    C A + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           + Q   G+       Y  L+N L K +  D+A  +F+E       PD +++ +LI G S+
Sbjct: 584 VDQGILGDAKT----YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G ++KA   F +M   G +P+++ YN L+ G CR  E+ +  ELL E+  K    P+ V
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-LHPNAV 698

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG-------------FG-- 378
           TY ++I GYCK G + +A  +++EM   G+ P +  +  L+DG             FG  
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758

Query: 379 -------------------KVGNMVSAEYMRERMLS-----FGYLPDVVTFSSLIDGYCR 414
                              K G       +  R++      FG  P+ VT++ +ID  C+
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCK 817

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G L    +L  +M+  NL P V T+T L+N   K  R  +      +     + P   M
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI-----LIIGHCMKGRMVEAISI 529
           Y+ +I+ F K G   +A V+V +M  K    D    +I     L+ G    G M  A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 530 FNKMLRIGCAPDDITVNSLI--SCL 552
              M+R+   PD  TV  LI  SC+
Sbjct: 938 MENMVRLQYIPDSATVIELINESCI 962



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 178/390 (45%), Gaps = 1/390 (0%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M   G +P     +  +    +  + + AK LL +     V++    Y+ L++ L+K  N
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
           AD A  +  E          + ++  I  +S+ G ++KA   F  M + G  P    Y +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI G CR   V +G+ELL E+K K        TY +V+ G C  G +D A  I  EM + 
Sbjct: 388 LIEGYCREKNVRQGYELLVEMK-KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G +P+ V +  LI  F +      A  + + M   G  PD+  ++SLI G  +  ++++ 
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
                EM    L PN +T+   I+   + +    A +++K+++   ++P   +   +I+ 
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +CK G V EA      M ++    D  T+T+L+ G     ++ +A  IF +M   G APD
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +   LI+   K G   +A  I     E+
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEE 656



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 185/451 (41%), Gaps = 36/451 (7%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           KR+D+P   L F  +            +++ +   LC  G  +    V + M       N
Sbjct: 72  KRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE----RN 127

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
            P+ E + SS +R  +    K           +    ++  L +  + +   +EAV++F 
Sbjct: 128 WPVAEVW-SSIVRCSQEFVGK-----------SDDGVLFGILFDGYIAKEYIEEAVFVFS 175

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
               L   P      +L+  L R   +   ++ +  M       D+ TY+ LI   CR  
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235

Query: 311 EVARGHELL--KEVKFKSE------------------FSPDVVTYTSVISGYCKLGKMDK 350
            V  G ++L   E +F++                     P   TY  +I G CK+ +++ 
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +  EM+S G+     T+++LIDG  K  N  +A+ +   M+S G       +   I 
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
              + G + +   L D M    L P    +  LI   C+E  +      L ++K  ++V 
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
            P+ Y  V+ G C +G++D A  IV EM    C+P+ V +T LI       R  +A+ + 
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +M   G APD    NSLI  L K    +EA
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 180/355 (50%), Gaps = 5/355 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKE-YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           S   +  LL  +VK  +   A+ + KE +  L  +PDT+  N++I  L  +  V   F  
Sbjct: 74  SVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSV 133

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              M   G  P +VT+  LI+GLC   +V R  EL+  V+ K+ +  DV TY  +I+G C
Sbjct: 134 LGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVE-KTGYRSDVKTYGVLINGLC 192

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K+GK  +A G   +M      P+ V ++ ++DG  K G +  A  +   M   G  P++V
Sbjct: 193 KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLV 252

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T++ LI G C  G+  +   L DEM    + P++ +  IL++ LCKE ++  A+  +  +
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                VP  F YN +ID +C    +DEA  +   M  + C PD V +T LI G C    +
Sbjct: 313 ILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI 372

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP---NEAFRIMQRASEDQNLQ 575
            +A+ + ++M+++G  PD +T  +LI    + G P    E F  M +  +  NLQ
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQ 427



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 218/434 (50%), Gaps = 9/434 (2%)

Query: 153 NHSFKTYNL-VMRSLCEMGLHDSVQVVFDYMRSDGHL-PNSPMIEF--FVSSCIRAGKCD 208
           +HS KT  L  MR+ C+ G   S+    ++  +   + P   +I+F   +   ++     
Sbjct: 33  SHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYT 92

Query: 209 AAKGLLSQFRPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            A  L+ +      +   TF+ N ++N+L           +     +L  +P   TF IL
Sbjct: 93  TAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTIL 152

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL   G+V +A E    +   G   D+ TY  LI+GLC++ + +     L++++ +  
Sbjct: 153 INGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKME-ERN 211

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           ++P+VV Y++V+ G CK G + +A G+  EM+  GIKP+ VT+  LI G    G    A 
Sbjct: 212 WNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAG 271

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M+  G +PD+ + + L+D  C+ G++ Q   +   M      P+V+T+  LI+  
Sbjct: 272 SLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRY 331

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C +N++++A R  + +     +P    Y  +I G+CK  N+++A  ++ EM +    PD 
Sbjct: 332 CLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDV 391

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRI 564
           VT+T LI G C  GR + A  +F  M + G  P+  T   ++  L K  + +EA   F  
Sbjct: 392 VTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHA 451

Query: 565 MQRASEDQNLQLPS 578
           M++++ D N+ + S
Sbjct: 452 MEKSNLDLNIVIYS 465



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 188/404 (46%), Gaps = 1/404 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           KTY +++  LC+MG           M      PN  +    +    + G    A GL  +
Sbjct: 182 KTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLE 241

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  +   Y  L+  L       EA  +  E  ++   PD  + NIL+  L + G+
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A      M   G  PD+ TYN+LI   C  N++     +  E+       PD+V YT
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF-ELMVSRGCLPDIVAYT 360

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I G+CK+  ++KA  + +EM   G  P  VT+  LI GF +VG  ++A+ +   M  +
Sbjct: 361 SLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKY 420

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +P++ T + ++DG C++  L++ L L   M+  NL  N+  ++I+++ +C   +LN A
Sbjct: 421 GQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTA 480

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                 L    L    + Y  +I+GF K G +D+A  +++ MEE  C PD  T+ + + G
Sbjct: 481 LELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG 540

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
              +  +  +I     M   G + D  T   +I+ L      NE
Sbjct: 541 LVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNE 584



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 166/333 (49%), Gaps = 6/333 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   +  L+N L  + +   AV +     +   + D  T+ +LI GL ++G+  +A  + 
Sbjct: 145 SVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWL 204

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M     +P++V Y+T++ GLC+   V+    L  E+  K    P++VTYT +I G C 
Sbjct: 205 RKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKG-IKPNLVTYTCLIQGLCN 263

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G+  +A  + +EM   G+ P   + N+L+D   K G ++ A+ +   M+  G +PDV T
Sbjct: 264 FGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFT 323

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++SLID YC   Q+++  ++ + M  +   P++  +T LI+  CK   +N A   L ++ 
Sbjct: 324 YNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMI 383

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
                P    +  +I GFC+ G    A  +   M +    P+  T  I++ G C    + 
Sbjct: 384 KVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLS 443

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           EA+S+F+ M +      ++ +N +I  ++  GM
Sbjct: 444 EALSLFHAMEK-----SNLDLNIVIYSIILDGM 471



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 181/412 (43%), Gaps = 1/412 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N+V+ SLC + L      V   M   G  P+       ++     G    A  L+     
Sbjct: 115 NVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEK 174

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
                    Y  L+N L K     EAV   ++       P+   ++ ++ GL + G V +
Sbjct: 175 TGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSE 234

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A     +M   G  P++VTY  LI GLC          LL E+  K    PD+ +   ++
Sbjct: 235 ALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEM-MKMGVMPDLQSLNILV 293

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
              CK GK+ +A  +   M   G  P   T+N LID +     M  A  + E M+S G L
Sbjct: 294 DVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCL 353

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD+V ++SLI G+C+   +N+ + L DEM     +P+V T+T LI   C+  R   A+  
Sbjct: 354 PDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKEL 413

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
              +     VP       ++DG CK+  + EA  +   ME+     + V ++I++ G C 
Sbjct: 414 FLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCS 473

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G++  A+ +F+ +   G   +      +I+   K G+ ++A  ++    E+
Sbjct: 474 AGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEEN 525



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 142/338 (42%), Gaps = 36/338 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS-Q 216
           TY  +++ LC  G       + D M   G +P+   +   V    + GK   AK ++   
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              GEV    F YNSL++    QN  DEA  +F+        PD   +  LI G  +I  
Sbjct: 313 ILVGEVP-DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 371

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL------------------ 318
           + KA     +M   G +PD+VT+ TLI G C+V       EL                  
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAI 431

Query: 319 ----------------LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                           L     KS    ++V Y+ ++ G C  GK++ A  +++ + + G
Sbjct: 432 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKG 491

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++ +   + ++I+GF K G +  AE +   M   G +PD  T++  + G     ++ + +
Sbjct: 492 LQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSI 551

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           K    M+ K  S +  T  ++IN L      N+ R FL
Sbjct: 552 KYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 63/152 (41%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +T  +++  LC+  L      +F  M       N  +    +     AGK + A  L 
Sbjct: 425 NLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 484

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      + ++ + Y  ++N   KQ   D+A  +          PD+ T+N+ +QGL   
Sbjct: 485 SCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAE 544

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            E+ ++ ++   M   G S D  T   +I+ L
Sbjct: 545 REIARSIKYLTMMRDKGFSVDATTTEMIINYL 576


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 159/287 (55%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 131 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAM 189

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 190 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRV 249

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + +RMLS   LPD++T+++LI G C+ G L Q   L DEM  K L P+ +T+T L
Sbjct: 250 DLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 309

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 310 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDL 369

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T++I   C KG + +   +  +M R G AP  +T N L++
Sbjct: 370 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 416



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 158/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 127 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 186

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G CK
Sbjct: 187 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LIPNGVTFTTLIDGRCK 245

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY  M S  + P  +T+N LI G  K G++  A  + + M   G  PD  T
Sbjct: 246 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 305

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 306 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 365

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             DL P    Y  +I+ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 366 SVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 191/384 (49%), Gaps = 13/384 (3%)

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
           +I+  VS   R GK  A+    +     G      ++++ L+ A ++     +A+    E
Sbjct: 27  LIQVVVS---RKGKGSASAVFATILETKGTQRSDIYVFSGLITAYLESGFXRDAI----E 79

Query: 252 YFRLYSQPDTW----TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
            +RL  +   W    T   +++ L ++   K  + F+ ++   G    +  +N L+   C
Sbjct: 80  CYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC 139

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  ++     +   +  K    P VV+Y ++++GY +LG +D+   + + M + G++P  
Sbjct: 140 KDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDV 198

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
            T++VLI+G  K   M  A  + + ML  G +P+ VTF++LIDG C+NG+++  +++   
Sbjct: 199 YTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKR 258

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  ++L P++ T+  LI  LCK+  L  A   + ++    L P  F Y  +IDG CK G+
Sbjct: 259 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 318

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +D A      M ++  + D V +T LI G C +GR V+A  +  +ML +   PD  T   
Sbjct: 319 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTM 378

Query: 548 LISCLLKGGMPNEAFRIMQRASED 571
           +I+   K G   +  ++++    D
Sbjct: 379 IINEFCKKGDVWKGSKLLKEMQRD 402



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 143/292 (48%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 127 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 186

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  + 
Sbjct: 187 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKN 246

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S    PD++TYNTLI GLC+  ++ + H+L+ E+  K    PD  T
Sbjct: 247 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG-LKPDKFT 305

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   ML
Sbjct: 306 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 365

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           S    PD  T++ +I+ +C+ G + +G KL  EM+    +P+V T+ +L+N 
Sbjct: 366 SVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 210/439 (47%), Gaps = 40/439 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y ++++ LCE        V+   M  DG   N       +    + G+   A+ +L + 
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM 221

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  S + YN++++   K     +A+ +     R    PD WT+NILI GL   GE 
Sbjct: 222 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC--GEK 279

Query: 278 -KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHE---------------- 317
             +A E   D    G +P ++T+  +I+G C   R+++  R                   
Sbjct: 280 PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGV 339

Query: 318 ----LLKEVKFKSE-----------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
               L+K+ +FK              +P+VV YTS+I GYCK+GK+  A  ++  M   G
Sbjct: 340 LINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG 399

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
            +P+A T++ LI G  +   +  A  +  +M   G  P V+T+++LI G C+  + +   
Sbjct: 400 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 459

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L + M+   L+P+   + +L +ALCK  R  +A  FL +     +V     Y  ++DGF
Sbjct: 460 RLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGF 516

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            KAGN D A V++ +M  + CK D  T+++L+   C + ++ EA+SI ++M   G   + 
Sbjct: 517 SKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNI 576

Query: 543 ITVNSLISCLLKGGMPNEA 561
           +    +IS ++K G  + A
Sbjct: 577 VAYTIIISEMIKEGKHDHA 595



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 195/410 (47%), Gaps = 5/410 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC     ++ +++ D +   G  P        ++   +A + D A  + +  
Sbjct: 267 TYNILIYGLCGEKPDEAEELLNDAIVR-GFTPTVITFTNIINGYCKAERIDDALRVKTSM 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 +    Y  L+N L+K+    EA     E F     P+   +  +I G  ++G+V
Sbjct: 326 LSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKV 385

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   GC P+  TY++LI GL +  ++ +   L+ +++ +   +P V+TYT+
Sbjct: 386 GAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ-EDGITPGVITYTT 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  + D A  ++  M   G+ P    +NVL     K G    AE     ++  G
Sbjct: 445 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGR---AEEAYSFLVRKG 501

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +   VT++SL+DG+ + G  +    L ++M  +    + YT+++L+ ALCK+ +LN+A 
Sbjct: 502 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEAL 561

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L Q+  + +      Y  +I    K G  D A  +  EM     KP   T+T+ I  +
Sbjct: 562 SILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSY 621

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C  G++ EA  +  +M R G APD +T N  I+     G  + AF  ++R
Sbjct: 622 CKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKR 671



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 162/311 (52%), Gaps = 4/311 (1%)

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +++ ILIQGL     V++A      M   GCS ++ TY  LI GLC+   +     +L+E
Sbjct: 161 YSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEE 220

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  +    P V TY ++I GYCK G+M  A GI   M   G  P   T+N+LI  +G  G
Sbjct: 221 MPLRG-VVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILI--YGLCG 277

Query: 382 NMV-SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
                AE +    +  G+ P V+TF+++I+GYC+  +++  L++   M   N   ++  +
Sbjct: 278 EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAY 337

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            +LIN L K+ R  +A+  + ++  N L P   +Y  +IDG+CK G V  A  +   ME 
Sbjct: 338 GVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEH 397

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           + C+P+  T++ LI G     ++ +A+++  KM   G  P  IT  +LI    K    + 
Sbjct: 398 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 457

Query: 561 AFRIMQRASED 571
           AFR+ +   ++
Sbjct: 458 AFRLFEMMEQN 468



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 169/392 (43%), Gaps = 55/392 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++  C+    D+   +F+ M  +G  P+         +  ++G+ + A   L   
Sbjct: 441 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL--V 498

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R G V ++   Y SL++   K  N D A  + ++      + D++T+++L+Q L +  ++
Sbjct: 499 RKG-VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKL 557

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M   G   +IV Y  +IS + +  +      +  E+   S   P   TYT 
Sbjct: 558 NEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEM-ISSGHKPSATTYTV 616

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-------------- 383
            IS YCK+G++++A  +  EM   G+ P  VT+NV I+G G +G M              
Sbjct: 617 FISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDAS 676

Query: 384 --------------------VSAEY-----------------MRERMLSFGYLPDVVTFS 406
                               V A Y                 + ERM+  G  P  VT+S
Sbjct: 677 CEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYS 736

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           S+I G+C+  +L +   L D M+GK++SPN   +T+LI   C       A  F+  +   
Sbjct: 737 SIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEF 796

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
              P    Y+ +I G C  G+ D+A  +  ++
Sbjct: 797 GFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL 828



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 195/475 (41%), Gaps = 57/475 (12%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++   C++G   +   VF  M  +G  PN+      +   I+  K   A  L+++ +
Sbjct: 372 YTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 431

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +T     Y +L+    K++  D A  +F+   +    PD   +N+L   L + G  +
Sbjct: 432 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAE 491

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A+ F    G        VTY +L+ G  +         L++++        D  TY+ +
Sbjct: 492 EAYSFLVRKGVVLTK---VTYTSLVDGFSKAGNTDFAAVLIEKM-VNEGCKADSYTYSVL 547

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +   CK  K+++A  I ++M   G+K + V + ++I    K G    A+ M   M+S G+
Sbjct: 548 LQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH 607

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN------------- 445
            P   T++  I  YC+ GQ+ +   L  EM+   ++P+V T+ + IN             
Sbjct: 608 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFS 667

Query: 446 -------ALCKEN-------------------------------RLNDARRFLKQLKWND 467
                  A C+ N                                L+   + L+++  + 
Sbjct: 668 TLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHG 727

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P    Y+ +I GFCKA  ++EA V+   M  K   P++  +T+LI   C      +A+
Sbjct: 728 LNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAV 787

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM--QRASEDQNLQLPSWK 580
           S    M+  G  P   + + LI  L   G  ++A  +       ED N    +WK
Sbjct: 788 SFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWK 842



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 1/184 (0%)

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G++  A ++   M   G   +  +++ LI G C    + + L L   M     S N++T+
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           T+LI  LCKE R++ ARR L+++    +VP  + YN +IDG+CK+G + +A  I A ME 
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
             C PD  T+ ILI G C + +  EA  + N  +  G  P  IT  ++I+   K    ++
Sbjct: 259 NGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 561 AFRI 564
           A R+
Sbjct: 318 ALRV 321



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 1/209 (0%)

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
           G + KA  +   M   G + +  ++ +LI G  +   +  A  +   M+  G   ++ T+
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
           + LI G C+ G+++   ++ +EM  + + P+V+T+  +I+  CK  R+ DA      ++ 
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           N   P  + YN +I G C     DEA  ++ +   +   P  +TFT +I G+C   R+ +
Sbjct: 259 NGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLK 554
           A+ +   ML   C  D      LI+ L+K
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIK 346



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 21/292 (7%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY + + S C++G  +  + +   M  DG  P+      F++ C   G  D A   L
Sbjct: 610 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTL 669

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +        + + Y  LL   +K +  D A Y+           DT        G+   
Sbjct: 670 KRMIDASCEPNYWTYWILLKHFLKMSLVD-AHYV-----------DT-------SGMWNW 710

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            E+   ++    M   G +P  VTY+++I+G C+   +     L   ++ K + SP+   
Sbjct: 711 IELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGK-DISPNEEI 769

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT +I   C +    KA     +M   G +P   +++ LI G    G+   A+ +   +L
Sbjct: 770 YTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLL 829

Query: 395 SF-GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
               Y  + V +  L DG  + G ++   +L   M+ ++   +  T++++ +
Sbjct: 830 GMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTD 881



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 77/184 (41%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    LL +     +  +   Y+S++    K    +EA  +F         P+   + +L
Sbjct: 714 DTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTML 773

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I+    I    KA  F  DM  FG  P + +Y+ LI GLC   +  +   L  ++    +
Sbjct: 774 IKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMED 833

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           ++ + V +  +  G  K G +D  + + + M +   +  + T++++ D   +    V +E
Sbjct: 834 YNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNIHEASGSVVSE 893

Query: 388 YMRE 391
              E
Sbjct: 894 LRGE 897


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 4/381 (1%)

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           S G  P+  +    + +  R G+   A  +L         +  F YN+L+    +    D
Sbjct: 63  SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLD 122

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A  +      +   PD +T+  LI+GL   G V  A     DM    C P +VTY  L+
Sbjct: 123 AARRLIAS---MPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLL 179

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             +C+ +   +  ++L E++ K   +P++VTY  +I+G C+  ++D A  I N ++S G 
Sbjct: 180 EAVCKSSGFGQAMKVLDEMRAKG-CTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGF 238

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P  V++  ++ G          E +   M+    +P+ VTF  L+  +CR G + + ++
Sbjct: 239 QPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIE 298

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           + D M     + N     I+IN++CK+ R++DA  FL  +      P    Y  V+ G C
Sbjct: 299 VLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLC 358

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           +AG  ++A  ++ EM  K C P++VTF   I   C KG + +AI +  +M   GC+   +
Sbjct: 359 RAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIV 418

Query: 544 TVNSLISCLLKGGMPNEAFRI 564
           T N+L++     G  + A  +
Sbjct: 419 TYNALVNGFCVQGRVDSALEL 439



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 203/421 (48%), Gaps = 5/421 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++ ++C+         V D MR+ G  PN       ++   R  + D A+ +L
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQIL 230

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++         T  Y ++L  L      ++   +F E       P+  TF++L++   R 
Sbjct: 231 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRG 290

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A E    M   GC+ +    N +I+ +C+   V    E L  +      SPD ++
Sbjct: 291 GMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYG-CSPDTIS 349

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT+V+ G C+ G+ + A  + NEM      P+ VTFN  I    + G +  A  + E+M 
Sbjct: 350 YTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMP 409

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            +G    +VT+++L++G+C  G+++  L+L + +  +   PN  T+T L+  LC   RL+
Sbjct: 410 EYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLD 466

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L ++  ND       +N ++  FC+ G V+EA  +V +M E  C P+ +TF  L+
Sbjct: 467 AAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLL 526

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G        EA+ + + ++  G + D IT +S++  L +     EA + M  A +D  +
Sbjct: 527 DGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQ-MFHAVQDMGM 585

Query: 575 Q 575
           +
Sbjct: 586 R 586



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 190/391 (48%), Gaps = 7/391 (1%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++R+LC  G       V       G   +       V+   R G+ DAA+ L++      
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---P 132

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V    + Y  L+  L  +    +A+ +  +  R   QP   T+ +L++ + +     +A 
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +   +M + GC+P+IVTYN +I+G+CR + V    ++L  +     F PD V+YT+V+ G
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYG-FQPDTVSYTTVLKG 251

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C   + +    ++ EM      P+ VTF++L+  F + G +  A  + +RM   G   +
Sbjct: 252 LCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTAN 311

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
               + +I+  C+ G+++   +  + M     SP+  ++T ++  LC+  R  DA+  L 
Sbjct: 312 TTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLN 371

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++   +  P    +N  I   C+ G +D+A +++ +M E  C    VT+  L+ G C++G
Sbjct: 372 EMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQG 431

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           R+  A+ +FN +    C P+ IT  +L++ L
Sbjct: 432 RVDSALELFNSL---PCEPNTITYTTLLTGL 459



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 185/380 (48%), Gaps = 4/380 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++R  C  G+ +    V D M   G   N+ +    ++S  + G+ D A   L+  
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                +  T  Y ++L  L +    ++A  +  E  R    P+  TFN  I  L + G +
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLI 398

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M  +GCS  IVTYN L++G C    V    EL   +  +    P+ +TYT+
Sbjct: 399 DQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE----PNTITYTT 454

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C   ++D A  +  EM       + VTFNVL+  F + G +  A  + ++M+  G
Sbjct: 455 LLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG 514

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++TF++L+DG   +    + L+L   +  K +S +  T++ +++ L +E+R+ +A 
Sbjct: 515 CTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAV 574

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    ++   + PK  MYN ++   CK    D A    A M    C P++ T+ ILI G 
Sbjct: 575 QMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGL 634

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G + EA  + +++   G
Sbjct: 635 AREGLLKEARYVLSELCSRG 654



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 167/344 (48%), Gaps = 4/344 (1%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           ++   L+  L ++    +A  + +      +  D + +N L+ G  R G +  A      
Sbjct: 71  YLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL--- 127

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + S    PD  TY  LI GLC    V     LL ++  + E  P VVTYT ++   CK  
Sbjct: 128 IASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDM-LRRECQPSVVTYTVLLEAVCKSS 186

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
              +A  + +EM + G  P+ VT+NV+I+G  +   +  A  +  R+ S+G+ PD V+++
Sbjct: 187 GFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYT 246

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +++ G C   +      L  EM   N  PN  TF +L+   C+   +  A   L ++  +
Sbjct: 247 TVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEH 306

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
                  + N VI+  CK G VD+A   +  M    C PD +++T ++ G C  GR  +A
Sbjct: 307 GCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDA 366

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             + N+M+R  C P+++T N+ I  L + G+ ++A  ++++  E
Sbjct: 367 KELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPE 410



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 193/408 (47%), Gaps = 4/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V++ LC     + V+V+F  M  +  +PN    +  V    R G  + A  +L + 
Sbjct: 244 SYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM 303

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                T +T + N ++N++ KQ   D+A             PDT ++  +++GL R G  
Sbjct: 304 SEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRW 363

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A E   +M    C P+ VT+NT I  LC+   + +   L++++  +   S  +VTY +
Sbjct: 364 EDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMP-EYGCSVGIVTYNA 422

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G+C  G++D A  ++N +     +P+ +T+  L+ G      + +A  +   M+   
Sbjct: 423 LVNGFCVQGRVDSALELFNSLPC---EPNTITYTTLLTGLCHAERLDAAAELLAEMMQND 479

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +VVTF+ L+  +C+ G + + ++L  +M     +PN+ TF  L++ + ++    +A 
Sbjct: 480 CPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEAL 539

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L  L    +      Y+ ++D   +   ++EA  +   +++   +P  V +  ++   
Sbjct: 540 ELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSAL 599

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +     AI  F  M+   C P++ T   LI  L + G+  EA  ++
Sbjct: 600 CKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVL 647



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 3/188 (1%)

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           ++  A  + ER  S G  PDV   + LI   CR G+ +   ++    +G     +V+ + 
Sbjct: 50  DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYN 109

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+   C+  RL+ ARR +  +    + P  + Y P+I G C  G V +A  ++ +M  +
Sbjct: 110 TLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRR 166

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            C+P  VT+T+L+   C      +A+ + ++M   GC P+ +T N +I+ + +    ++A
Sbjct: 167 ECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA 226

Query: 562 FRIMQRAS 569
            +I+ R S
Sbjct: 227 RQILNRLS 234



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 114/242 (47%), Gaps = 4/242 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G  DS   +F+ +  +   PN+      ++    A + DAA  LL++ 
Sbjct: 419 TYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEM 475

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +  ++   +N L++   ++   +EA+ + ++       P+  TFN L+ G++     
Sbjct: 476 MQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNS 535

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E  + + S G S D +TY++++  L R + +    ++   V+      P  V Y  
Sbjct: 536 EEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQ-DMGMRPKAVMYNK 594

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++S  CK  + D+A   +  M S    P+  T+ +LI+G  + G +  A Y+   + S G
Sbjct: 595 ILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRG 654

Query: 398 YL 399
            L
Sbjct: 655 VL 656



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 20/194 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C+ G  +    +   M   G  PN       +         + A  LL   
Sbjct: 486 TFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGL 545

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +++ T  Y+S+++ L +++  +EAV MF     +  +P    +N ++  L +  E 
Sbjct: 546 VSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCET 605

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +FF  M S  C P+  TY  LI GL R         LLKE ++             
Sbjct: 606 DRAIDFFAHMVSNSCMPNESTYVILIEGLAR-------EGLLKEARY------------- 645

Query: 338 VISGYCKLGKMDKA 351
           V+S  C  G + K+
Sbjct: 646 VLSELCSRGVLSKS 659


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 226/513 (44%), Gaps = 83/513 (16%)

Query: 132 RLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           R  N + G + L E  + N+ +  S  TY  V++ +C  G  D    +   M + G  PN
Sbjct: 394 REKNVRQGYELLVEMKKRNIVI--SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             +    + + ++  +   A  +L + +   +    F YNSL+  L K    DEA     
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP---------------- 294
           E      +P+ +T+   I G     E   A ++  +M   G  P                
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 295 -------------------DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
                              D  TY  L++GL + ++V    E+ +E++ K   +PDV +Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSY 630

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I+G+ KLG M KA+ I++EM   G+ P+ + +N+L+ GF + G +  A+ + + M  
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+ VT+ ++IDGYC++G L +  +L DEMK K L P+ + +T L++  C   RLND
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLND 747

Query: 456 ARR------------------FLKQLKW--------------NDLV---------PKPFM 474
             R                  F   + W              N L+         P    
Sbjct: 748 VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +ID  CK GN++ A  +  +M+     P  +T+T L+ G+   GR  E   +F++ +
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             G  PD I  + +I+  LK GM  +A  ++ +
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 247/529 (46%), Gaps = 26/529 (4%)

Query: 49  LFFTVRPSRVRASTIAAIAHFHGLANGGSRPFD---EKEVNYRCSNEF--WFVKVVCTLL 103
           LF+ V    V  + +  +  +H L     R  +    K+V ++   EF    + V   L 
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK 263

Query: 104 LRSSYLSDTCARYLCEKLSPL--------NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHS 155
           L+ S +        C+ L PL        + L  IKRL++ K  L  +E   + +SL++ 
Sbjct: 264 LKESMI--------CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLL--VEMDSLGVSLDN- 312

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             TY+L++  L +    D+ + +   M S G      M +  +    + G  + AK L  
Sbjct: 313 -HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                 +      Y SL+    ++ N  +   +  E  +       +T+  +++G+   G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           ++  A+    +M + GC P++V Y TLI    + +       +LKE+K +   +PD+  Y
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK-EQGIAPDIFCY 490

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            S+I G  K  +MD+A     EM   G+KP+A T+   I G+ +     SA+   + M  
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G LP+ V  + LI+ YC+ G++ +       M  + +  +  T+T+L+N L K ++++D
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A    ++++   + P  F Y  +I+GF K GN+ +A+ I  EM E+   P+ + + +L+ 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G C  G + +A  + ++M   G  P+ +T  ++I    K G   EAFR+
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 186/391 (47%), Gaps = 1/391 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+  +  + + G+ +  + +FD M + G +P +      +    R         LL + +
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + +S + Y +++  +    + D A  + KE      +P+   +  LI+   +     
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A     +M   G +PDI  YN+LI GL +   +      L E+  ++   P+  TY + 
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAF 528

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           ISGY +  +   A     EM  CG+ P+ V    LI+ + K G ++ A      M+  G 
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           L D  T++ L++G  +N +++   ++  EM+GK ++P+V+++ +LIN   K   +  A  
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++    L P   +YN ++ GFC++G +++A  ++ EM  K   P+ VT+  +I G+C
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             G + EA  +F++M   G  PD     +L+
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 195/445 (43%), Gaps = 56/445 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGL 213
           TY   +    E     S       MR  G LPN  +    ++   + GK    C A + +
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           + Q   G+       Y  L+N L K +  D+A  +F+E       PD +++ +LI G S+
Sbjct: 584 VDQGILGDAKT----YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G ++KA   F +M   G +P+++ YN L+ G CR  E+ +  ELL E+  K    P+ V
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-LHPNAV 698

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG-------------FG-- 378
           TY ++I GYCK G + +A  +++EM   G+ P +  +  L+DG             FG  
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758

Query: 379 -------------------KVGNMVSAEYMRERMLS-----FGYLPDVVTFSSLIDGYCR 414
                              K G       +  R++      FG  P+ VT++ +ID  C+
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCK 817

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G L    +L  +M+  NL P V T+T L+N   K  R  +      +     + P   M
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI-----LIIGHCMKGRMVEAISI 529
           Y+ +I+ F K G   +A V+V +M  K    D    +I     L+ G    G M  A  +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937

Query: 530 FNKMLRIGCAPDDITVNSLI--SCL 552
              M+R+   PD  TV  LI  SC+
Sbjct: 938 MENMVRLQYIPDSATVIELINESCI 962



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 178/390 (45%), Gaps = 1/390 (0%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M   G +P     +  +    +  + + AK LL +     V++    Y+ L++ L+K  N
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327

Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
           AD A  +  E          + ++  I  +S+ G ++KA   F  M + G  P    Y +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI G CR   V +G+ELL E+K K        TY +V+ G C  G +D A  I  EM + 
Sbjct: 388 LIEGYCREKNVRQGYELLVEMK-KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G +P+ V +  LI  F +      A  + + M   G  PD+  ++SLI G  +  ++++ 
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
                EM    L PN +T+   I+   + +    A +++K+++   ++P   +   +I+ 
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +CK G V EA      M ++    D  T+T+L+ G     ++ +A  IF +M   G APD
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASED 571
             +   LI+   K G   +A  I     E+
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEE 656



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 185/451 (41%), Gaps = 36/451 (7%)

Query: 131 KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
           KR+D+P   L F  +            +++ +   LC  G  +    V + M       N
Sbjct: 72  KRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE----RN 127

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
            P+ E + SS +R  +    K           +    ++  L +  + +   +EAV++F 
Sbjct: 128 WPVAEVW-SSIVRCSQEFVGK-----------SDDGVLFGILFDGYIAKGYIEEAVFVFS 175

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
               L   P      +L+  L R   +   ++ +  M       D+ TY+ LI   CR  
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAG 235

Query: 311 EVARGHELL--KEVKFKSE------------------FSPDVVTYTSVISGYCKLGKMDK 350
            V  G ++L   E +F++                     P   TY  +I G CK+ +++ 
Sbjct: 236 NVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLED 295

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +  EM+S G+     T+++LIDG  K  N  +A+ +   M+S G       +   I 
Sbjct: 296 AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
              + G + +   L D M    L P    +  LI   C+E  +      L ++K  ++V 
Sbjct: 356 VMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
            P+ Y  V+ G C +G++D A  IV EM    C+P+ V +T LI       R  +A+ + 
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +M   G APD    NSLI  L K    +EA
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 200/421 (47%), Gaps = 5/421 (1%)

Query: 138 LGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPM 193
           LG     FS + + L   ++    T   +M+ LC  G         D + + G L +   
Sbjct: 126 LGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVT 185

Query: 194 IEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF 253
               ++   + G    A  LL +     V  +  +YN +++ L K     EA  ++ +  
Sbjct: 186 YGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVV 245

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
                PD +T+  LI G   +G+ ++      DM     + ++ TYN LI  LC+   + 
Sbjct: 246 GRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLG 305

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
           + H++ + +  +    PD+VT+ +++SGYC    + +A  +++    CGI P   ++N+L
Sbjct: 306 KAHDM-RNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNIL 364

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G+ K   +  A  +  +M      P++VT+SSLIDG C++G+++   +L   +     
Sbjct: 365 IIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGP 424

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           SPNV T+ I+++ALCK   ++ A      +    L P    YN +I+G+CK+  +DEA  
Sbjct: 425 SPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMN 484

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  EM  +   PD VT+  LI G C  GR+  A  +FN M   G   D IT N L     
Sbjct: 485 LFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFS 544

Query: 554 K 554
           K
Sbjct: 545 K 545



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 209/452 (46%), Gaps = 50/452 (11%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N+++ S+ +M  + +   +   M   G  P+   +   ++     G    A  +L
Sbjct: 77  SVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVL 136

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQ--NNADEAVYMFKEYFRLYSQPDTWTFNIL 267
                  ++   +T++T M    +N  V++     D  V    + F L    D  T+  L
Sbjct: 137 GMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVV---AQGFLL----DEVTYGTL 189

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL +IG  ++AFE  + M      P++V YN ++ GLC+   V    +L  +V  +  
Sbjct: 190 INGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRG- 248

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TYT +I G+C LG+  + T +  +M    +  +  T+N+LID   K G +  A 
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAH 308

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            MR  M+  G  PD+VTF++L+ GYC    + +  KL D      ++P+V+++ ILI   
Sbjct: 309 DMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGY 368

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA--------------NV 493
           CK NR+++A     ++ +  L P    Y+ +IDG CK+G +  A              NV
Sbjct: 369 CKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNV 428

Query: 494 IVAE---------------------MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           I                        M E+   P+  ++ ILI G+C   R+ EA+++F +
Sbjct: 429 ITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEE 488

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           M R    PD +T N LI  L K G  + A+ +
Sbjct: 489 MHRRNLVPDSVTYNCLIDGLCKSGRISHAWEL 520



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 160/325 (49%), Gaps = 1/325 (0%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D+AV +F     ++  P    FN+++  + ++     A      MG  G +P IVT + L
Sbjct: 60  DDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I+  C +  +     +L  V  K  +  + +T T+++ G C  G++ KA   ++ + + G
Sbjct: 120 INCYCHLGHMGFAFSVLGMV-LKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                VT+  LI+G  K+G    A  +  +M      P+VV ++ ++DG C++G + +  
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L  ++ G+ + P+V+T+T LI+  C   +  +  R L  +   ++    + YN +ID  
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G + +A+ +   M E+  +PD VTF  L+ G+C+   +VEA  +F+     G  PD 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQR 567
            + N LI    K    +EA  +  +
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNK 383



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 36/272 (13%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+ ++N +  TYN+++ +LC+ G+      + + M   G  P+       +S        
Sbjct: 280 VDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDV 339

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A+ L   F    +T   + YN L+    K N  DEA+ +F +       P+  T++ L
Sbjct: 340 VEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSL 399

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL + G +  A+E F  +   G SP+++TYN ++  LC++  V +  EL   + F+  
Sbjct: 400 IDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELF-NLMFERG 458

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI------------- 374
            +P+V +Y  +I+GYCK  ++D+A  ++ EM+   + P +VT+N LI             
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518

Query: 375 ----------------------DGFGKVGNMV 384
                                 D F K+ +++
Sbjct: 519 ELFNVMHDGGPPVDVITYNILFDAFSKIQHVI 550



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 35/249 (14%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D A  ++  + +    PS V FN+++    K+ +  +A  + ++M   G  P +VT S 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 408 LIDGYCR-----------------------------------NGQLNQGLKLCDEMKGKN 432
           LI+ YC                                    NG++ + L+  D +  + 
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
              +  T+  LIN LCK     +A   L +++   + P   +YN ++DG CK G V EA 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            + +++  +   PD  T+T LI G C  G+  E   +   M+      +  T N LI  L
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 553 LKGGMPNEA 561
            K GM  +A
Sbjct: 299 CKKGMLGKA 307


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 207/441 (46%), Gaps = 37/441 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+ G   + + ++  M ++G  P +      +S   +  + + A  L  +  
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMN 490

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             E+  S + + +L+  L   N   EA  +F E      +P   T+N++I+G  +   + 
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMD 550

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KAFE   DM   G  PD  TY  LISGLC    V+   + + ++  K     + + Y+++
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLH-KKNLKLNEMCYSAL 609

Query: 339 ISGYCKLGKMDKAT-----------------------------------GIYNEMNSCGI 363
           + GYC  G++ +A                                    G+  +M   G+
Sbjct: 610 LHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGL 669

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P +V +  +ID + K G+   +    + M++    P+VVT+++ ++G C+ G++++   
Sbjct: 670 RPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGH 729

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L ++M   N+SPN  T+   +++L KE  + +A     ++    L+     YN +I GFC
Sbjct: 730 LFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATYNILIRGFC 788

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G + EA  +++EM E    PD +T++ +I  HC  G +  A+ +++ MLR G  PD +
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSV 848

Query: 544 TVNSLISCLLKGGMPNEAFRI 564
             N LI      G  ++AF +
Sbjct: 849 AFNLLIYGCCVNGALDKAFEL 869



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 194/405 (47%), Gaps = 1/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + V+RSLCE+      +    +M S+    +       +    + G    A  +    
Sbjct: 220 TCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSL 279

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +      Y +L+    +    D+ + +  E   L   P     + L+ GL + G +
Sbjct: 280 REKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNI 339

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A++    +G FG  P++  YN LI+ LC+  ++ +  ELL +         + VTY+ 
Sbjct: 340 DSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKA-ELLYKNMHSMNLPLNDVTYSI 398

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  +CK G +D A   +  M   GI+ +   +N LI+G  K G++ +AE++  +M++ G
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P   TF++LI GYC++ Q+ +  KL  EM  K ++P+VYTFT LI  LC  N + +A 
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    + P    YN +I+G+CKA N+D+A  ++ +M      PD  T+  LI G 
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C  GR+  A    + + +     +++  ++L+      G   EA 
Sbjct: 579 CSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 198/440 (45%), Gaps = 15/440 (3%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
           LC+    L +LEV K L     GLK                TY  ++   C +   D   
Sbjct: 263 LCKGGGVLEALEVRKSLREK--GLK------------EDVVTYCTLVLGFCRVQQFDDGI 308

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            + + M   G +P    +   V    + G  D+A  L+ +        + F+YN+L+NAL
Sbjct: 309 CLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINAL 368

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K  + D+A  ++K    +    +  T++ILI    + G +  A  +F  M   G    I
Sbjct: 369 CKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETI 428

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
             YN+LI+G C+  +++   E L          P   T+T++ISGYCK  +++KA  +Y 
Sbjct: 429 YPYNSLINGHCKFGDLSAA-EFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYR 487

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EMN   I PS  TF  LI G      M  A  + + M+     P  VT++ +I+GYC+  
Sbjct: 488 EMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAH 547

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            +++  +L ++M    L P+ YT+  LI+ LC   R++ A+ F+  L   +L      Y+
Sbjct: 548 NMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYS 607

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G+C  G + EA     EM ++    D V   +LI G   +  M     +  KM   
Sbjct: 608 ALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQ 667

Query: 537 GCAPDDITVNSLISCLLKGG 556
           G  PD +   S+I    K G
Sbjct: 668 GLRPDSVIYTSMIDAYSKEG 687



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 219/469 (46%), Gaps = 26/469 (5%)

Query: 116 YLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
           Y C  +  + SL  +K     K  + ++E +R +LS+     TYN+++  LC+ G     
Sbjct: 219 YTCSAV--IRSLCELKDFCRAKEKILWMESNRFDLSI----VTYNVLIHGLCKGGGVLEA 272

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYN 230
             V   +R  G   +       V    R  + D    L+++     F P E  +S     
Sbjct: 273 LEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVS----- 327

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            L++ L K+ N D A  +  +  R    P+ + +N LI  L +  ++ KA   + +M S 
Sbjct: 328 GLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSM 387

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF----KSEFSPDVVTYTSVISGYCKLG 346
               + VTY+ LI   C+     RG   + E  F    +      +  Y S+I+G+CK G
Sbjct: 388 NLPLNDVTYSILIDSFCK-----RGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFG 442

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +  A  +Y +M + G++P+A TF  LI G+ K   +  A  +   M      P V TF+
Sbjct: 443 DLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFT 502

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           +LI G C   ++ +  KL DEM  + + P   T+ ++I   CK + ++ A   L+ +  N
Sbjct: 503 ALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHN 562

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
            LVP  + Y P+I G C  G V  A   + ++ +K  K +++ ++ L+ G+C +GR+ EA
Sbjct: 563 GLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEA 622

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           +S   +M++ G   D +    LI   +K       F ++++   DQ L+
Sbjct: 623 LSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMY-DQGLR 670



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 220/490 (44%), Gaps = 53/490 (10%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGL---------------HD 173
           +I  L + KL L+F  F  ++ ++NH+  ++ +++ +L +  L                D
Sbjct: 69  LINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSD 128

Query: 174 SVQVVFDYMRSDGHLPNSPMI--EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
              V   ++ S      S  +  +F V S ++  +   A  +L       +       ++
Sbjct: 129 PKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSA 188

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           +LN L++         +F E      +PD +T + +I+ L  + +  +A E    M S  
Sbjct: 189 ILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNR 248

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
               IVTYN LI GLC+   V    E+ K ++ K     DVVTY +++ G+C++ + D  
Sbjct: 249 FDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKG-LKEDVVTYCTLVLGFCRVQQFDDG 307

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             + NEM   G  P+    + L+DG  K GN+ SA  +  ++  FG+LP++  +++LI+ 
Sbjct: 308 ICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINA 367

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL-------- 463
            C+   L++   L   M   NL  N  T++ILI++ CK   L+ A  +  ++        
Sbjct: 368 LCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRET 427

Query: 464 ------------KWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVA 496
                       K+ DL    F+Y  +I+               G+CK   V++A  +  
Sbjct: 428 IYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYR 487

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM EK   P   TFT LI G C    M EA  +F++M+     P ++T N +I    K  
Sbjct: 488 EMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAH 547

Query: 557 MPNEAFRIMQ 566
             ++AF +++
Sbjct: 548 NMDKAFELLE 557



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 193/448 (43%), Gaps = 37/448 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++ +LC+    D  ++++  M S     N       + S  + G  D A+    +  
Sbjct: 361 YNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMI 420

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + YNSL+N   K  +   A +++ +      +P   TF  LI G  +  +V+
Sbjct: 421 EDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVE 480

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KAF+ + +M     +P + T+  LI GLC  NE+A   +L  E+  + +  P  VTY  +
Sbjct: 481 KAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEM-VERKIKPTEVTYNVM 539

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYCK   MDKA  +  +M   G+ P   T+  LI G    G + +A+   + +     
Sbjct: 540 IEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNL 599

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             + + +S+L+ GYC  G+L + L    EM  + ++ ++    +LI+   K+  +     
Sbjct: 600 KLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFG 659

Query: 459 FLKQLKWNDLVPKPFMYNPVID-----------------------------------GFC 483
            LK++    L P   +Y  +ID                                   G C
Sbjct: 660 LLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLC 719

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G +D A  +  +M      P+ VT+   +     +G M EA  + ++ML+ G   +  
Sbjct: 720 KVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTA 778

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASED 571
           T N LI    K G   EA +++   +E+
Sbjct: 779 TYNILIRGFCKLGRLIEATKVLSEMTEN 806



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 162/363 (44%), Gaps = 42/363 (11%)

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + +P EVT     YN ++    K +N D+A  + ++       PDT+T+  LI GL   G
Sbjct: 528 KIKPTEVT-----YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTG 582

Query: 276 EVKKAFEFFYD-----------------------------------MGSFGCSPDIVTYN 300
            V  A +F  D                                   M   G + D+V + 
Sbjct: 583 RVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHA 642

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            LI G  +  ++ R   LLK++ +     PD V YTS+I  Y K G   K+    + M +
Sbjct: 643 VLIDGAMKQQDMKRLFGLLKKM-YDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVT 701

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
               P+ VT+   ++G  KVG +  A ++ E+ML+    P+ VT+   +D   + G + +
Sbjct: 702 EKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKE 761

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              L  EM  K L  N  T+ ILI   CK  RL +A + L ++  N + P    Y+ +I 
Sbjct: 762 ATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIY 820

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             C++G+V  A  +   M  K  +PD V F +LI G C+ G + +A  + N ML  G  P
Sbjct: 821 EHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP 880

Query: 541 DDI 543
             I
Sbjct: 881 RQI 883



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 166/378 (43%), Gaps = 46/378 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+    D    + + M  +G +P++      +S     G+  AAK  +   
Sbjct: 535 TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDL 594

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAV------------------------------- 246
               + ++   Y++LL+    Q    EA+                               
Sbjct: 595 HKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDM 654

Query: 247 -YMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
             +F    ++Y Q   PD+  +  +I   S+ G  KK+ E    M +  C P++VTY   
Sbjct: 655 KRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAF 714

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ++GLC+V E+ R   L +++   +  SP+ VTY   +    K G M +AT +++EM   G
Sbjct: 715 MNGLCKVGEIDRAGHLFEKM-LTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-G 772

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  +  T+N+LI GF K+G ++ A  +   M   G  PD +T+S++I  +CR+G +   +
Sbjct: 773 LLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAV 832

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY------- 475
           +L D M  K + P+   F +LI   C    L+ A      +    L P+  +        
Sbjct: 833 ELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLG 892

Query: 476 --NPVIDGFCKAGNVDEA 491
             N ++ G C  G VD A
Sbjct: 893 VCNFLMHGGCVTGEVDTA 910


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 200/414 (48%), Gaps = 5/414 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGKCDAAKGLLS 215
           T N +++ LC+     D++ +VF  M   G+ P+       +   C+     +A + L+ 
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187

Query: 216 QFRPGEVTMS--TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
               G    S     YN++++   K+   D+A ++F E       PD  T+N LI GL +
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              + KA      M   G  PD  TYN +I G C + ++     LLK++   S   PDVV
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS-GSGLQPDVV 306

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY+ +I  YCK+G+  +A  +++ M   G KP++  +++L+ G+   G ++    + + M
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G   +   F+ LI  Y ++G +++ +    EM+   L P+V +++ +I+ LCK  R+
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA     Q+    L P    +  +I G C  G   +   +  EM  +   PD +    +
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +   C +GR+VEA   F+ ++ IG  PD ++ N+LI      G  +E+ + + R
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDR 540



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 204/438 (46%), Gaps = 41/438 (9%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFF---VSSCIRAGKCDAAKGL 213
           +YN +++ LC E    ++++++  +M +DG    SP +  +   +    + G+ D A  L
Sbjct: 164 SYNALIKGLCVEKKSQEALELLI-HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFL 222

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +     +      YNSL++ L K    D+AV + +  F     PDT T+NI+I+G   
Sbjct: 223 FHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCS 282

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G++++A      M   G  PD+VTY+ LI   C++   A    +   +  K +  P+  
Sbjct: 283 LGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQ-KPNST 341

Query: 334 TYTSVISGYC-----------------------------------KLGKMDKATGIYNEM 358
            Y  ++ GY                                    K G +DKA   + EM
Sbjct: 342 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 401

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G++P  V+++ +I    K G +  A Y   +M+S G  P++++F+SLI G C  G+ 
Sbjct: 402 RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 461

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            +  +L  EM  + + P+      +++ LCKE R+ +A+ F   +    + P    YN +
Sbjct: 462 KKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTL 521

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           IDG+C  G +DE+   +  M     +PD  T+  L+ G+   GR+ +A++++ +M R   
Sbjct: 522 IDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDV 581

Query: 539 APDDITVNSLISCLLKGG 556
               IT N ++  L + G
Sbjct: 582 KFCAITSNIMLHGLFQAG 599



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 205/441 (46%), Gaps = 38/441 (8%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL-S 215
           +TYN+++R  C +G  +    +   M   G  P+       +    + G+C  A+ +  S
Sbjct: 271 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDS 330

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             R G+   ST +Y+ LL+    +    +   +     R     +   FNILI   ++ G
Sbjct: 331 MVRKGQKPNST-IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 389

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V KA   F +M   G  PD+V+Y+T+I  LC+   V        ++      SP+++++
Sbjct: 390 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM-VSEGLSPNIISF 448

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           TS+I G C +G+  K   +  EM + GI P A+  N ++D   K G +V A+   + ++ 
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 508

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PDVV++++LIDGYC  G++++ +K  D M    L P+ +T+  L+N   K  R+ D
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568

Query: 456 A-----RRFLKQLKWNDLVPKPFM------------------------------YNPVID 480
           A       F K +K+  +     +                              YN V+ 
Sbjct: 569 ALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 628

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G C+   VDEA  +  ++  K  + D  TF+I+I      GR+ EA S+F+ M+  G  P
Sbjct: 629 GLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVP 688

Query: 541 DDITVNSLISCLLKGGMPNEA 561
           D IT + +I   ++ G+  E+
Sbjct: 689 DVITYSLMIKSHIEEGLLEES 709



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 209/461 (45%), Gaps = 37/461 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF-------------------- 197
           TY+L+++  C++G     + VFD M   G  PNS +                        
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 198 ---------------VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
                          + +  + G  D A    ++ R   +      Y+++++ L K    
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++AVY F +       P+  +F  LI GL  IGE KK  E  ++M + G  PD +  NT+
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           +  LC+   V    +    V       PDVV+Y ++I GYC +GKMD++    + M S G
Sbjct: 487 MDNLCKEGRVVEAQDFFDMV-IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIG 545

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++P + T+N L++G+ K G +  A  +   M         +T + ++ G  + G++    
Sbjct: 546 LRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAAR 605

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L  +M  +     + T+  ++  LC+ + +++A R  + L+  +       ++ VI+  
Sbjct: 606 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINAL 665

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G +DEA  + + M  +   PD +T++++I  H  +G + E+ ++F  M + GCA D 
Sbjct: 666 LKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADS 725

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
             +N ++  LL+ G    A   + +  E +N  L +   A+
Sbjct: 726 HMLNIIVRRLLEKGDVRRAGTYLTKIDE-KNFSLEASTAAL 765



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 169/360 (46%), Gaps = 14/360 (3%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVK-------QNNADEAVYMFKEYFRLYSQPDTWTFN 265
           LL Q RP     S   +NS+L  + +       +++A  AV +F    R           
Sbjct: 40  LLPQARPA----SVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAAIIG 95

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           ILI+    +G +  AF  F      G     VT N LI GLC  N      +++     +
Sbjct: 96  ILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPE 155

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG---IKPSAVTFNVLIDGFGKVGN 382
             ++PDV +Y ++I G C   K  +A  +   M + G     P+ V++N +IDGF K G 
Sbjct: 156 LGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGE 215

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A ++   M+  G  PDVVT++SLIDG C+   +++ + +   M  K + P+  T+ I
Sbjct: 216 VDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNI 275

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +I   C   +L +A R LK++  + L P    Y+ +I  +CK G   EA  +   M  K 
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            KP+   + IL+ G+  KG +++   + + M+R G   +    N LI    K G  ++A 
Sbjct: 336 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 395



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 191/409 (46%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+    D    +  +M   G +P++      +      G+ + A  LL + 
Sbjct: 237 TYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM 296

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+ L+    K     EA  +F    R   +P++  ++IL+ G +  G +
Sbjct: 297 SGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGAL 356

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               +    M   G   +   +N LI    +   V +      E++ ++   PDVV+Y++
Sbjct: 357 IDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR-QNGLRPDVVSYST 415

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI   CK G+++ A   +N+M S G+ P+ ++F  LI G   +G     E +   M++ G
Sbjct: 416 VIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 475

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +  ++++D  C+ G++ +     D +    + P+V ++  LI+  C   +++++ 
Sbjct: 476 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESI 535

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L ++    L P  + YN +++G+ K G V++A  +  EM  K  K   +T  I++ G 
Sbjct: 536 KQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGL 595

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              GR+V A  ++ KM+  G      T N+++  L +    +EA R+ +
Sbjct: 596 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFE 644



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 100/223 (44%), Gaps = 4/223 (1%)

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  ++N M   G+   A    +LI  F  VG +  A       L  G+    VT + LI 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 411 GYCRNGQLNQGLKLC-DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN--- 466
           G C   + +  + +    M     +P+V+++  LI  LC E +  +A   L  +  +   
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           +  P    YN VIDGF K G VD+A  +  EM  +   PD VT+  LI G C    M +A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           ++I   M   G  PD  T N +I      G   EA R++++ S
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS 297



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 36/279 (12%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           L F  +N  ++      N +M +LC+ G     Q  FD +   G  P+       +    
Sbjct: 467 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYC 526

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-------- 254
             GK D +   L +     +   ++ YNSLLN   K    ++A+ +++E FR        
Sbjct: 527 FVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAI 586

Query: 255 --------------------LY-------SQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
                               LY       +Q    T+N ++ GL     V +A   F D+
Sbjct: 587 TSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDL 646

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            S     D+ T++ +I+ L +V  +     L   +  +    PDV+TY+ +I  + + G 
Sbjct: 647 RSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPV-PDVITYSLMIKSHIEEGL 705

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           ++++  ++  M   G    +   N+++    + G++  A
Sbjct: 706 LEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744


>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
 gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
          Length = 546

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 182/343 (53%), Gaps = 3/343 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEY-FRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           ST  +N+LL++LV       A  +F+    +LY  P+  + NIL++GL  +G++  A + 
Sbjct: 167 STRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGMGDLDAALKV 226

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
             +M  +G  PD+VTY T+++  C   ++    +L  ++   S   PD   YT ++ GYC
Sbjct: 227 LDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDI-VASGRRPDATMYTVLVDGYC 285

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
             GK+  A  I +EM + G+KP+ VT++V+I+   K G  + A  +   ML  GY+PD  
Sbjct: 286 HRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDLTREMLGAGYVPDTP 345

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
             + ++D  C++G+  +  ++  +M  K++ P+    + LI  LCK   + +AR    +L
Sbjct: 346 LCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCKNGMVQEARGLFDEL 405

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +    VP    YN +I G C+ G + EA  +  +M E+R +P+ +T+  LI G C  G+ 
Sbjct: 406 E-RGFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKS 464

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            E  ++F +M+  GC P      +L+  L +    +  + I++
Sbjct: 465 NEGYALFKEMVAKGCTPSKFLYQALVDSLSEPSHDDTVWTIVE 507



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 1/285 (0%)

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           +   F  + SF   P   ++N L+  L     +     L +    K   +P++V+   ++
Sbjct: 152 SLRLFLSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILL 211

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G   +G +D A  + +EM   GI P  VT+  ++  +   G++  A+ + + +++ G  
Sbjct: 212 KGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRR 271

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD   ++ L+DGYC  G+L    ++ DEM+   + PN  T++++I A CKE +  +A   
Sbjct: 272 PDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDL 331

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            +++     VP   +   V+D  C+ G   EAN I  +M +K   PD    + LI   C 
Sbjct: 332 TREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCK 391

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            G + EA  +F+++ R G  P  +T NSLI  L + G   EA R+
Sbjct: 392 NGMVQEARGLFDELER-GFVPSLLTYNSLIIGLCENGELQEAGRV 435



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 2/307 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       +   +  G  DAA  +L +     +      Y ++L A   + + + A  +
Sbjct: 202 PNLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQL 261

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F +      +PD   + +L+ G    G+++ A     +M + G  P+ VTY+ +I   C+
Sbjct: 262 FDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCK 321

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             +     +L +E+   + + PD      V+   C+ GK  +A  I+ +M    + P   
Sbjct: 322 EGKSIEACDLTREM-LGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNT 380

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
             + LI    K G +  A  + +  L  G++P ++T++SLI G C NG+L +  ++ D+M
Sbjct: 381 VVSTLIYWLCKNGMVQEARGLFDE-LERGFVPSLLTYNSLIIGLCENGELQEAGRVWDDM 439

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             +   PN  T+  LI   CK  + N+     K++      P  F+Y  ++D   +  + 
Sbjct: 440 VERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSLSEPSHD 499

Query: 489 DEANVIV 495
           D    IV
Sbjct: 500 DTVWTIV 506



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 4/210 (1%)

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQLNQGL 422
           +PS  +FN L+        +  A  +     +  Y+ P++V+ + L+ G    G L+  L
Sbjct: 165 RPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGMGDLDAAL 224

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           K+ DEM G  + P+V T+T ++ A C +  L  A++    +  +   P   MY  ++DG+
Sbjct: 225 KVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTVLVDGY 284

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G + +A  I+ EME    KP++VT++++I   C +G+ +EA  +  +ML  G  PD 
Sbjct: 285 CHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDLTREMLGAGYVPDT 344

Query: 543 ITVNSLISCLL---KGGMPNEAFRIMQRAS 569
                ++  L    K G  NE +R M + S
Sbjct: 345 PLCAKVVDVLCQDGKAGEANEIWRQMVKKS 374


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 208/428 (48%), Gaps = 17/428 (3%)

Query: 158 TYNLVMRSLCE-----MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           T+ +++   C+     +G     Q++   +R+D  +  +P++    + C +    DA   
Sbjct: 15  TFGILISCCCDAGCLNLGFAALGQIIKTGLRADA-VAFTPLLR---TLCAKKRTSDAMNI 70

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA---VYMFKEYFRLYSQPDTWTFNILIQ 269
           +L +      T   F Y++LL  L  +   +EA   ++M  E       PD  +++ +I 
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGD-NCPPDVVSYSTVIH 129

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  + G+V KA+  F  M   G  P++VT N++I GLC+V  + +   +L+++       
Sbjct: 130 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM-IDEHIM 188

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+  TY S+I GY   G+  +A  I  EM+  G +P+ VT+N+LID   K G    A  +
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+  G  PD  T+ SL+ GY   G L +   + D M    +  N +TF+I I A CK
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             RL++A     +++    +P    Y  VIDG CK G +D+A     +M +    P+ +T
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
           FT LI G  M G+  +A  +F +M+  G  PD     ++I  L K G   EA   F +M 
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428

Query: 567 RASEDQNL 574
           RA    N+
Sbjct: 429 RAGAKPNV 436



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 201/445 (45%), Gaps = 16/445 (3%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R LC K    +++ ++ R   P+LG     FS            Y+ +++ LC     + 
Sbjct: 56  RTLCAKKRTSDAMNIVLR-RMPELGCTPDVFS------------YSTLLKGLCAEKKCEE 102

Query: 175 VQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
              +   M  DG    P+       +    + G    A  L  +     +  +    NS+
Sbjct: 103 AAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSV 162

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++ L K    D+A  + ++    +  P+  T+N LI G    G+  +A     +M   G 
Sbjct: 163 IDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ 222

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P++VTYN LI  LC+    A   E+   +  +S   PD  TY S++ GY   G + +  
Sbjct: 223 RPNVVTYNMLIDCLCKSGFHAEAREIFNSM-IQSGPKPDATTYGSLLHGYATEGNLVEMN 281

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            + + M   G++ +  TF++ I  + K G +  A     +M   G++PD+VT++++IDG 
Sbjct: 282 NVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGL 341

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G+L+  +    +M    LSPN+ TFT LI+      +   A     ++    + P  
Sbjct: 342 CKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDV 401

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            ++  +ID   K G V EA  +   M     KP+ V++  +I G+ + G + E + + + 
Sbjct: 402 TIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 461

Query: 533 MLRIGCAPDDITVNSLISCLLKGGM 557
           ML IG  P  +T N+L+  ++  G+
Sbjct: 462 MLLIGLKPTAVTFNTLLDGMVSMGL 486



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 164/341 (48%), Gaps = 37/341 (10%)

Query: 259 PDTWTFNILIQ----------GLSRIGEVKK------AFEF------------------- 283
           PD  TF ILI           G + +G++ K      A  F                   
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 284 -FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-FSPDVVTYTSVISG 341
               M   GC+PD+ +Y+TL+ GLC   +     EL+  +    +   PDVV+Y++VI G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           + K G + KA  ++ +M   GI P+ VT N +IDG  KV  M  AE + ++M+    +P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T++SLI GY  +GQ  + +++  EM      PNV T+ +LI+ LCK     +AR    
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +  +   P    Y  ++ G+   GN+ E N +   M +   + +  TF+I I  +C  G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           R+ EA   F KM ++G  PD +T  ++I  L K G  ++A 
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAM 351



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 183/408 (44%), Gaps = 20/408 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ V+    + G       +F  M   G  PN       +    +    D A+ +L Q 
Sbjct: 123 SYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 182

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YNSL++  +      EAV + KE  R   +P+  T+N+LI  L + G  
Sbjct: 183 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFH 242

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F  M   G  PD  TY +L+ G      +   + + K++  ++    +  T++ 
Sbjct: 243 AEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNV-KDLMVQNGMRSNHHTFSI 301

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I  YCK G++D+A+  + +M   G  P  VT+  +IDG  K+G +  A     +M+  G
Sbjct: 302 EIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDG 361

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++TF++LI G+   G+  +  +L  EM  + + P+V  FT +I+ L KE ++ +A+
Sbjct: 362 LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQ 421

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA-------------------NVIVAEM 498
           +    +      P    YN +I G+  AG V E                    N ++  M
Sbjct: 422 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGM 481

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
                KPD  T   LI   C  GR+ + +++F +ML      D IT N
Sbjct: 482 VSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 4/265 (1%)

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
           G+   +PDI T+  LIS  C    +  G   L ++  K+    D V +T ++   C   +
Sbjct: 5   GAKKVAPDIATFGILISCCCDAGCLNLGFAALGQI-IKTGLRADAVAFTPLLRTLCAKKR 63

Query: 348 MDKATGI-YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG--YLPDVVT 404
              A  I    M   G  P   +++ L+ G         A  +   M   G    PDVV+
Sbjct: 64  TSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVS 123

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +S++I G+ + G + +   L  +M    + PNV T   +I+ LCK   ++ A   L+Q+ 
Sbjct: 124 YSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 183

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              ++P    YN +I G+  +G   EA  I+ EM     +P+ VT+ +LI   C  G   
Sbjct: 184 DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHA 243

Query: 525 EAISIFNKMLRIGCAPDDITVNSLI 549
           EA  IFN M++ G  PD  T  SL+
Sbjct: 244 EAREIFNSMIQSGPKPDATTYGSLL 268



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 3/176 (1%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD+ TF  LI   C  G LN G     ++    L  +   FT L+  LC + R +DA   
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 460 -LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE--KRCKPDKVTFTILIIG 516
            L+++      P  F Y+ ++ G C     +EA  ++  M E    C PD V+++ +I G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
              +G + +A ++F KML  G  P+ +T NS+I  L K    ++A  ++Q+  ++ 
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 3/138 (2%)

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC-KAGNV 488
            K ++P++ TF ILI+  C    LN     L Q+    L      + P++   C K    
Sbjct: 6   AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTS 65

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG--CAPDDITVN 546
           D  N+++  M E  C PD  +++ L+ G C + +  EA  + + M   G  C PD ++ +
Sbjct: 66  DAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYS 125

Query: 547 SLISCLLKGGMPNEAFRI 564
           ++I    K G   +A+ +
Sbjct: 126 TVIHGFFKEGDVGKAYTL 143


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 195/397 (49%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN +M  L + G  D    V+  MR  G  P+       + S  R  +  AA  LL+  
Sbjct: 113 SYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNM 172

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 M+   Y +++    ++N  DE   +F +           TFN L+  L + G+V
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDV 232

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+  +    +   G  P++ TYN  I GLC+  E+     ++  +  +    PDVVTY  
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGP-KPDVVTYNY 291

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  K  +A     ++ + G++P + T+N LI G+ K G +  AE +    +  G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNG 351

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PD  T+ SLIDG C  G+ N+ L L +E  GK + PNV  +  LI  L  +  + +A 
Sbjct: 352 FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAA 411

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++    L+P+   +N +++G CK G V +A+ +V  M  K   PD  TF ILI G+
Sbjct: 412 QLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             + +M  A+ I + M+  G  PD  T NSL++ L K
Sbjct: 472 STQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCK 508



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 177/368 (48%), Gaps = 1/368 (0%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G     + LL +     V  + F YN  +  L ++   D AV M         +PD  
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVV 287

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+N LI GL +  + ++A  +   + + G  PD  TYNTLI+G C+   V     +L   
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNA 347

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
            F   F PD  TY S+I G C  G+ ++A  ++NE    GIKP+ + +N LI G    G 
Sbjct: 348 VFNG-FVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGL 406

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           ++ A  +   M   G +P+V TF+ L++G C+ G ++    L   M  K   P+++TF I
Sbjct: 407 ILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+    + ++ +A   L  +  N + P  + YN +++G CK    ++       M EK 
Sbjct: 467 LIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKG 526

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C P+  TF IL+   C   ++ +A+ +  +M      PD +T  +LI    K G  + A+
Sbjct: 527 CAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586

Query: 563 RIMQRASE 570
            + ++  E
Sbjct: 587 TLFRKMEE 594



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 212/503 (42%), Gaps = 81/503 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  LC+ G     + + D +   G LPN     FF+    + G+ DAA  ++ + 
Sbjct: 218 TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRL 277

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      YN L+  L K +   EA     +      +PD++T+N LI G  + G V
Sbjct: 278 IDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMV 337

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A     +    G  PD  TY +LI GLC   E  R   L  E   K    P+V+ Y +
Sbjct: 338 QLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG-IKPNVILYNT 396

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G    G + +A  + +EM+  G+ P   TFN+L++G  K+G +  A+ + + M+S G
Sbjct: 397 LIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG--------------------------- 430
           Y PD+ TF+ LI GY    ++   L++ D M                             
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVM 516

Query: 431 --------KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                   K  +PN++TF IL+ +LC+ ++L+ A   L+++K   + P    +  +IDGF
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGF 576

Query: 483 CKAGNVDEANVIVAEMEE-----------------------------------KRC-KPD 506
           CK G++D A  +  +MEE                                    RC  PD
Sbjct: 577 CKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             T+ +++ G C  G +        +M+  G  P   T+  +I+CL       EA  I+ 
Sbjct: 637 GYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696

Query: 567 RASEDQNLQLPSWKKAVPLRTNT 589
           R  +         K  VP   NT
Sbjct: 697 RMVQ---------KGLVPEAVNT 710



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 188/397 (47%), Gaps = 2/397 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN  L     TYN ++   C+ G+    + +      +G +P+       +      G+ 
Sbjct: 313 VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGET 372

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  L ++     +  +  +YN+L+  L  Q    EA  +  E       P+  TFNIL
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNIL 432

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL ++G V  A      M S G  PDI T+N LI G     ++    E+L +V   + 
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL-DVMMDNG 491

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PDV TY S+++G CK  K +     Y  M   G  P+  TFN+L++   +   +  A 
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKAL 551

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL-SPNVYTFTILINA 446
            + E M +    PD VTF +LIDG+C+NG L+    L  +M+   + S +  T+ I+I+A
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHA 611

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
             ++  +  A +  +++    L P  + Y  ++DGFCK GNVD     + EM E    P 
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPS 671

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             T   +I   C++ R+ EA  I ++M++ G  P+ +
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 163/333 (48%), Gaps = 1/333 (0%)

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           ++    EAV +F+       +P  +++N ++  L   G   +A + +  M   G +PD+ 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           ++   +   CR +       LL  +  +     +VV Y +V+ G+ +    D+   ++ +
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKDEGYELFGK 206

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M + G+     TFN L+    K G++   E + ++++  G LP++ T++  I G C+ G+
Sbjct: 207 MLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE 266

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           L+  +++   +  +   P+V T+  LI  LCK ++  +A  +L +L    L P  F YN 
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNT 326

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I G+CK G V  A  I+         PD+ T+  LI G C +G    A+++FN+ L  G
Sbjct: 327 LIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             P+ I  N+LI  L   G+  EA ++    SE
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSE 419


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 217/488 (44%), Gaps = 88/488 (18%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMR----------SDGH------------LPNSPMIE 195
           T NL++R+LC+ G  +  Q VF+ M           + G+            L   P + 
Sbjct: 147 TRNLLLRALCDAGRMELAQRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMN 206

Query: 196 FFVSSCIRAGKC-----DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
             V + + AG C     + A+ L+ + R   +  +   +NS ++AL K     +A  +FK
Sbjct: 207 LVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFK 266

Query: 251 EYFRLYS----QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           +    +     +PD  TF++++ G    G V +A      M   G    + +YN  +SGL
Sbjct: 267 DMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGL 326

Query: 307 CRVNEVARGHELLKEVKFK----------------------------------SEFSPDV 332
            R   V   HELL+E+  +                                     SPDV
Sbjct: 327 VRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDV 386

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTYTS++  YC  G +  A  I +EM   G  P++ T+NVL+    + G    AE + ER
Sbjct: 387 VTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLER 446

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS------------------ 434
           M   GY  D    + +IDG CRN +L+  + + D M  +  +                  
Sbjct: 447 MSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSI 506

Query: 435 -----PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
                P+  T++ILI+ALCKE R ++A++ L ++   D+ P   +Y+  I G+CK G   
Sbjct: 507 SQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTS 566

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A  ++ +ME+K C P   T+ +LI G   K +  E + + ++M   G +P+ +T NSLI
Sbjct: 567 LAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLI 626

Query: 550 SCLLKGGM 557
               + GM
Sbjct: 627 KSFCQQGM 634



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 183/392 (46%), Gaps = 13/392 (3%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P +P+    + + +R  + D  + L             F  N LL AL      + A   
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELA--- 164

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            +  F      + ++F IL +G  R G    A +    M S     ++V  NT+++G C+
Sbjct: 165 -QRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSM----NLVVCNTVVAGFCK 219

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN---SCGI-K 364
              V     L++ ++ +   +P+VVT+ S IS  CK G++  A  I+ +M      G+ +
Sbjct: 220 EGLVEEAERLVERMRVQG-LAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPR 278

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  VTF+V++ GF   G +  A  + + M   G+L  V +++  + G  RNG++ +  +L
Sbjct: 279 PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHEL 338

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             EM  + + PN YT+ I+++ LCKE +  DARR    ++   + P    Y  ++  +C 
Sbjct: 339 LREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCS 398

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            GN+  AN I+ EM +K C P+  T+ +L+      GR  EA  +  +M   G + D   
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAG 458

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
            N +I  L +    + A  I+    E+ +  L
Sbjct: 459 CNIIIDGLCRNSKLDVAMGIVDGMWEEGSTAL 490



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 167/371 (45%), Gaps = 21/371 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++   C+ G  D  +V+ D MR  G L        ++S  +R G+   A  LL + 
Sbjct: 283 TFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREM 342

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +++ YN +++ L K+  A +A  +          PD  T+  L+      G +
Sbjct: 343 AHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNI 402

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M   GC+P+  TYN L+  L R         LL+ +  K  +S D      
Sbjct: 403 AAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKG-YSLDTAGCNI 461

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN----MVSAEYMRERM 393
           +I G C+  K+D A GI + M   G               G++GN    +VS   + +R 
Sbjct: 462 IIDGLCRNSKLDVAMGIVDGMWEEGST-----------ALGRLGNSFLSVVSDSSISQRC 510

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           L     PD +T+S LI   C+ G+ ++  K   EM  K++SP+   +   I+  CK  + 
Sbjct: 511 L-----PDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A + L+ ++     P    YN +I GF +    DE   +++EMEEK   P+ +T+  L
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSL 625

Query: 514 IIGHCMKGRMV 524
           I   C +G + 
Sbjct: 626 IKSFCQQGMLT 636



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 124/286 (43%), Gaps = 24/286 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G     + V +++RS    P+       + +    G   AA  +L + 
Sbjct: 353 TYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEM 412

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ++F YN LL +L +     EA  + +         DT   NI+I GL R  ++
Sbjct: 413 AQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKL 472

Query: 278 KKAF--------EFFYDMGSFG---------------CSPDIVTYNTLISGLCRVNEVAR 314
             A         E    +G  G               C PD +TY+ LIS LC+      
Sbjct: 473 DVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDE 532

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             + L E+  K + SPD V Y + I GYCK GK   A  +  +M   G  PS  T+N+LI
Sbjct: 533 AKKKLLEMIVK-DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLI 591

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            GF +         +   M   G  P+V+T++SLI  +C+ G L +
Sbjct: 592 RGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTR 637



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 8/186 (4%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           R L+    P    ++ LI    R  +L+    L  ++      P+V+T  +L+ ALC   
Sbjct: 100 RALASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAG 159

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R+  A+R  + +     V   F +  +  G+C+AG   +A  ++  M       + V   
Sbjct: 160 RMELAQRVFEAMP----VRNEFSFGILARGYCRAGRSVDALKVLDGMPSM----NLVVCN 211

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            ++ G C +G + EA  +  +M   G AP+ +T NS IS L K G   +A+RI +   ED
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQED 271

Query: 572 QNLQLP 577
               LP
Sbjct: 272 WQHGLP 277


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 222/436 (50%), Gaps = 7/436 (1%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNS 191
           +LGL  L FS     L   F     T+N +++ LC  G +H ++    D + + G   + 
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNF-HDKVVAQGFHLDQ 175

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 ++   + G+  AA  LL +     V  +  MYN +++ + K    ++A  ++ +
Sbjct: 176 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 235

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                  PD +T N LI G   +G++K+A    + M     +P + T++ L+   C+  +
Sbjct: 236 MVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGK 295

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           V     +L  V  K +   DVVTY S++ GYC + +++KA  I++ M S G+  +  ++ 
Sbjct: 296 VKEAKMMLG-VTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYT 354

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            +I+G  K+  +  A  + E M     +P+VVT++SLIDG  + G+++  LKL DEM  +
Sbjct: 355 TMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDR 414

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              PN+ T+  +++ALCK + ++ A   L  LK   + P  + Y  +I G C++G +++A
Sbjct: 415 GQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDA 474

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             +  ++  K    D  T+T++I G C+KG    A+++ +KM   GC P+  T   +I  
Sbjct: 475 QKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILS 534

Query: 552 LLKGGMPNEAFRIMQR 567
           L +    + A ++++ 
Sbjct: 535 LFEKDENDMAEKLLRE 550



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 193/414 (46%), Gaps = 36/414 (8%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P  P+I+F   +SS ++A     A  L  Q     +    F +N L+N   +      + 
Sbjct: 66  PTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSF 125

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F +  +    P+  TFN LI+GL   G + +A  F   + + G   D V+Y TLI+GL
Sbjct: 126 SVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGL 185

Query: 307 CRVNEVARGHELLKEVKFK----------------------------------SEFSPDV 332
           C+V  +    +LLK V  K                                     SPD 
Sbjct: 186 CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDD 245

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T  S+I G+C +G++ +A G+ ++M    I P   TF++L+D F K G +  A+ M   
Sbjct: 246 FTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGV 305

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
            +    + DVVT++SL+DGYC   ++N+   + D M  + +  NV ++T +IN LCK   
Sbjct: 306 TMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKM 365

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A    ++++   ++P    YN +IDG  K G +     +V EM ++   P+ +T+  
Sbjct: 366 VDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNS 425

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           ++   C    + +AI++   +   G  PD  T   LI  L + G   +A ++ +
Sbjct: 426 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFE 479



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 170/345 (49%), Gaps = 11/345 (3%)

Query: 159 YNLVMRSLCEMGLHDSV-----QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           YN+++ ++C+  L +       Q+V   +  D    NS +  F    CI  G+   A GL
Sbjct: 213 YNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGF----CI-MGQLKEAVGL 267

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L +     +    + ++ L++A  K+    EA  M     +     D  T+N L+ G   
Sbjct: 268 LHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           + E+ KA + F  M S G   ++ +Y T+I+GLC++  V     L +E++ + +  P+VV
Sbjct: 328 VKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCR-KIIPNVV 386

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S+I G  KLGK+     + +EM+  G  P+ +T+N ++D   K  ++  A  +   +
Sbjct: 387 TYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNL 446

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  PD+ T++ LI G C++G+L    K+ +++  K  + +VYT+T++I   C +   
Sbjct: 447 KDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLF 506

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           + A   L +++ N  +P    Y  VI    +    D A  ++ EM
Sbjct: 507 DAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREM 551



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 1/226 (0%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + AK +        V  +   Y +++N L K    DEAV +F+E       P+  T+N L
Sbjct: 332 NKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL ++G++    +   +M   G  P+I+TYN+++  LC+ + V +   LL  +K +  
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQG- 450

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD+ TYT +I G C+ GK++ A  ++ ++   G      T+ V+I GF   G   +A 
Sbjct: 451 IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            +  +M   G +P+  T+  +I       + +   KL  EM  + L
Sbjct: 511 ALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 3/245 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C +   +  + +FD M S G + N       ++   +    D A  L  + 
Sbjct: 317 TYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEM 376

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R  ++  +   YNSL++ L K       + +  E       P+  T+N ++  L +   V
Sbjct: 377 RCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHV 436

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA     ++   G  PD+ TY  LI GLC+  ++    ++ +++  K  ++ DV TYT 
Sbjct: 437 DKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKG-YNLDVYTYTV 495

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI-DGFGKVGNMVSAEYMRERMLSF 396
           +I G+C  G  D A  + ++M   G  P+A T+ ++I   F K  N ++ + +RE M++ 
Sbjct: 496 MIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLRE-MIAR 554

Query: 397 GYLPD 401
           G L +
Sbjct: 555 GLLDE 559



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 75/141 (53%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           +  KN +P +  F  ++++L K    + A    +Q++ N +V   F +N +I+ F + G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
              +  +  ++ +K   P+ +TF  LI G C+KG + +A++  +K++  G   D ++  +
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 548 LISCLLKGGMPNEAFRIMQRA 568
           LI+ L K G    A ++++R 
Sbjct: 181 LINGLCKVGRITAALQLLKRV 201


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 213/422 (50%), Gaps = 22/422 (5%)

Query: 142 FLEFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
             +F R+ L + H+     +N ++ S  +M  + +V  +   +      P+   +   ++
Sbjct: 48  LFQFHRM-LCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILIN 106

Query: 200 SCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
                G+ + A  +LS+     ++P  VT++T     L+  L  +    +A++   +   
Sbjct: 107 CFCHLGQINLAFSVLSKILKWGYQPDTVTLTT-----LIKGLCLKGQVKKALHFHDKLLA 161

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
              + D  ++  LI G+ +IGE + A +    +      P++V YNT+I  LC+   V+ 
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              L  E+  K   S +VVTY+++I G+C +GK+ +A G  NEM    I P    +N L+
Sbjct: 222 ACNLFSEMSVKG-ISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           D   K G +  A+ +   ++     P+V+T+++LIDGY ++     GL          ++
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLM--------GVT 332

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+V+++ I+IN LCK  R+ +A    K++   ++VP    YN +IDG CK+G +  A  +
Sbjct: 333 PDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           + EM ++    + +T+  LI G C  G++ +AI++ NKM   G  PD  T+N L+  LL 
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLC 452

Query: 555 GG 556
            G
Sbjct: 453 KG 454



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 200/408 (49%), Gaps = 29/408 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T   +++ LC  G         D + + G   +       ++   + G+  AA  LL + 
Sbjct: 135 TLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRI 194

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  MYN++++ L K+    EA  +F E        +  T++ +I G   +G++
Sbjct: 195 DGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKL 254

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A  F  +M     +PD+  YNTL+  L +  +V     +L  V  K+   P+V+TY +
Sbjct: 255 TEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVL-AVIVKTCLKPNVITYNT 313

Query: 338 VISGY---------------------------CKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           +I GY                           CK+ ++++A  +Y EM+   + P+ VT+
Sbjct: 314 LIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTY 373

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           N LIDG  K G +  A  + + M   G+  +V+T++SLI+G C+NGQL++ + L ++MK 
Sbjct: 374 NSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKD 433

Query: 431 KNLSPNVYTFTILINA-LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
           + + P++YT  IL++  LCK  RL +A+   + L      P  + YN +I G CK G +D
Sbjct: 434 QGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLD 493

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           EA  + ++ME+  C P+ +TF I+I     KG   +A  +  +M+  G
Sbjct: 494 EAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 181/380 (47%), Gaps = 29/380 (7%)

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
           T     +N +L++  K  +    V + +       QPD +T NILI     +G++  AF 
Sbjct: 60  TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
               +  +G  PD VT  TLI GLC   +V +      ++     F  D V+Y ++I+G 
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKL-LAQGFRLDQVSYGTLINGV 178

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           CK+G+   A  +   ++    +P+ V +N +ID   K   +  A  +   M   G   +V
Sbjct: 179 CKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANV 238

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VT+S++I G+C  G+L + L   +EM  K ++P+VY +  L++AL KE ++ +A+  L  
Sbjct: 239 VTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAV 298

Query: 463 LKWNDLVPKPFMYNPVIDGF---------------------------CKAGNVDEANVIV 495
           +    L P    YN +IDG+                           CK   V+EA  + 
Sbjct: 299 IVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLY 358

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            EM +K   P+ VT+  LI G C  GR+  A  + ++M   G   + IT NSLI+ L K 
Sbjct: 359 KEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKN 418

Query: 556 GMPNEAFRIMQRASEDQNLQ 575
           G  ++A  ++ +  +DQ +Q
Sbjct: 419 GQLDKAIALINKM-KDQGIQ 437



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 64/338 (18%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+  L      +F  M   G   N       +      GK   A G L++  
Sbjct: 206 YNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMV 265

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEA---------------VYMFKEYFRLYSQ----- 258
              +    ++YN+L++AL K+    EA               V  +      Y++     
Sbjct: 266 LKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNA 325

Query: 259 -------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                  PD W++NI+I  L +I  V++A   + +M      P+ VTYN+LI GLC+   
Sbjct: 326 VGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGR 385

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP------ 365
           ++   +L+ E+  +   + +V+TY S+I+G CK G++DKA  + N+M   GI+P      
Sbjct: 386 ISYAWDLIDEMHDRGHHA-NVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLN 444

Query: 366 ------------------------------SAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
                                         +  T+N++I G  K G +  A  ++ +M  
Sbjct: 445 ILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMED 504

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            G  P+ +TF  +I      G+ ++  KL  EM  + L
Sbjct: 505 SGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 35/253 (13%)

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK---------------------------- 379
           +D A   ++ M      P  + FN ++D F K                            
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 380 -------VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
                  +G +  A  +  ++L +GY PD VT ++LI G C  GQ+ + L   D++  + 
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
              +  ++  LIN +CK      A + L+++      P   MYN +ID  CK   V EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            + +EM  K    + VT++ +I G C+ G++ EA+   N+M+     PD    N+L+  L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 553 LKGGMPNEAFRIM 565
            K G   EA  ++
Sbjct: 284 HKEGKVKEAKNVL 296



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 64/320 (20%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E S   +S N    TY+ ++   C +G         + M      P+  +    V + 
Sbjct: 226 FSEMSVKGISAN--VVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 202 IRAGKCDAAKGLLSQ-----FRPGEVTMSTFM----------------------YNSLLN 234
            + GK   AK +L+       +P  +T +T +                      YN ++N
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMIN 343

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
            L K    +EA+ ++KE  +    P+T T+N LI GL + G +  A++   +M   G   
Sbjct: 344 RLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHA 403

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVK------------------------------- 323
           +++TYN+LI+GLC+  ++ +   L+ ++K                               
Sbjct: 404 NVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGL 463

Query: 324 ----FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
                   + P+V TY  +I G+CK G +D+A  + ++M   G  P+A+TF ++I    +
Sbjct: 464 FQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLE 523

Query: 380 VGNMVSAEYMRERMLSFGYL 399
            G    AE +   M++ G L
Sbjct: 524 KGETDKAEKLLCEMIARGLL 543



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 2/189 (1%)

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           N+  A +   RML   + P ++ F+ ++D + +       + L   ++ K + P+ +T  
Sbjct: 43  NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLN 102

Query: 442 ILINALCKENRLNDARRFL-KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           ILIN  C   ++N A   L K LKW    P       +I G C  G V +A     ++  
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILKWG-YQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  + D+V++  LI G C  G    AI +  ++      P+ +  N++I CL K  + +E
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 561 AFRIMQRAS 569
           A  +    S
Sbjct: 222 ACNLFSEMS 230


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 211/422 (50%), Gaps = 1/422 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           ++  L  S KTY+ +M +L       ++  + + M + G  PN       +    RAG+ 
Sbjct: 219 ISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRI 278

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A G+L              Y  L++AL      D+A  ++ +      +PD  T+  L
Sbjct: 279 DDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITL 338

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +      G+++    F+ +M + G +PD+VTY  L+  LC+  +V +  ++L  ++ +  
Sbjct: 339 MSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG- 397

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P++ TY ++ISG   L ++D+A  ++N M S G+ P+A ++ + ID +GK+G+   A 
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              E+M   G +P +   ++ +      G++ +   + +++    LSP+  T+ +++   
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            K  +++ A + L ++      P   + N +ID   KAG VDEA  +   +++ +  P  
Sbjct: 518 SKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTV 577

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+ ILI G   +G++++A+ +F  M   GC P+ +T N+L+ CL K    + A ++  R
Sbjct: 578 VTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCR 637

Query: 568 AS 569
            +
Sbjct: 638 MT 639



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 181/340 (53%), Gaps = 2/340 (0%)

Query: 210  AKGLLSQFRPGEVTMST-FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            AK L  +F     T  T   YN L++ L+  N  + A+ +F E       P+ +T+N+L+
Sbjct: 771  AKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLL 830

Query: 269  QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
                +   + + FE + +M   GC P+I+T+N +IS L + N + +  +L  E+    +F
Sbjct: 831  DAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEI-ISGDF 889

Query: 329  SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            SP   TY  +I G  K G+ ++A  I+ EM     KP+   +N+LI+GFGK GN+  A  
Sbjct: 890  SPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACD 949

Query: 389  MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
            + +RM+  G  PD+ +++ L++     G+++  +   +E+K   L P+  ++ ++IN L 
Sbjct: 950  LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLG 1009

Query: 449  KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
            K  RL +A     ++K   + P+ + YN +I  F  AG VD+A  +  E++    +P+  
Sbjct: 1010 KSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVF 1069

Query: 509  TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            T+  LI GH   G    A S+F KM+ +GC+P+  T   L
Sbjct: 1070 TYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 220/478 (46%), Gaps = 40/478 (8%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD--GH 187
           +K + +P   L + +      ++ H+ +T N ++  L   G  + +  VFD M+      
Sbjct: 96  LKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINR 155

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
            PN+  +  F +  I+ G    A   L + R     ++ + YN L+  L++     EA+ 
Sbjct: 156 NPNT-YLTIFKALSIKGG-IRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALK 213

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           ++K       +P   T++ L+  L R  +     +   +M + G  P+I TY   I  L 
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLG 273

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           R   +   + +LK ++      PDVVTYT +I   C  GK+DKA  +Y +M +   KP  
Sbjct: 274 RAGRIDDAYGILKTME-DEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDL 332

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           VT+  L+  FG  G++ + +     M + GY PDVVT++ L++  C++G+++Q   + D 
Sbjct: 333 VTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDV 392

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+ + + PN++T+  LI+ L    RL++A      ++   + P  + Y   ID + K G+
Sbjct: 393 MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGD 452

Query: 488 -----------------------------------VDEANVIVAEMEEKRCKPDKVTFTI 512
                                              + EA  I  ++      PD VT+ +
Sbjct: 453 PEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNM 512

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++  +   G++ +A  +  +ML  GC PD I VNSLI  L K G  +EA+++  R  +
Sbjct: 513 MMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD 570



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 198/418 (47%), Gaps = 2/418 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ +LC  G  D  + ++  MR+  H P+       +S     G  +  K   S+ 
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y  L+ AL K    D+A  M          P+  T+N LI GL  +  +
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRL 418

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F +M S G +P   +Y   I    ++ +  +  +  +++K K    P +    +
Sbjct: 419 DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMK-KRGIMPSIAACNA 477

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +    ++G++ +A  I+N++++CG+ P +VT+N+++  + K G +  A  +   MLS G
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++  +SLID   + G++++  ++   +K   L+P V T+ ILI  L KE +L  A 
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +K +   P    +N ++D  CK   VD A  +   M    C PD +T+  +I G 
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
             +GR   A   +++M +   +PD +T+ +L+  ++K G   +A +I+        LQ
Sbjct: 658 IKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQ 714



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 204/491 (41%), Gaps = 74/491 (15%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L+    TYN++M+   + G  D    +   M S+G  P+  ++   + +  +AG+ D
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  +  + +  ++  +   YN L+  L K+    +A+ +F         P+T TFN L+
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             L +   V  A + F  M    CSPD++TYNT+I GL  + E   G+      + K   
Sbjct: 620 DCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL--IKEGRAGYAFWFYHQMKKFL 677

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNE-MNSCGIKPS-------------------AV 368
           SPD VT  +++ G  K G+++ A  I  E ++  G++ S                   A+
Sbjct: 678 SPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAI 737

Query: 369 TFNV----------------LIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSSLIDG 411
           +F                  LI    K    + A+ + ++   S G  P   +++ L+DG
Sbjct: 738 SFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDG 797

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTF------------------------------- 440
                     LKL  EMK     PN++T+                               
Sbjct: 798 LLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPN 857

Query: 441 ----TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
                I+I+AL K N +N A     ++   D  P P  Y P+I G  KAG  +EA  I  
Sbjct: 858 IITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFE 917

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM + +CKP+   + ILI G    G +  A  +F +M++ G  PD  +   L+ CL   G
Sbjct: 918 EMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTG 977

Query: 557 MPNEAFRIMQR 567
             ++A    + 
Sbjct: 978 RVDDAVHYFEE 988



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 141/288 (48%), Gaps = 1/288 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYNL++ +  +    D +  +++ M   G  PN       +S+ +++   + A  L  + 
Sbjct: 825  TYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEI 884

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              G+ + +   Y  L+  L+K   ++EA+ +F+E      +P+   +NILI G  + G V
Sbjct: 885  ISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNV 944

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
              A + F  M   G  PD+ +Y  L+  L     V       +E+K  +   PD V+Y  
Sbjct: 945  NIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL-TGLDPDTVSYNL 1003

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I+G  K  ++++A  +++EM + GI P   T+N LI  FG  G +  A  M E +   G
Sbjct: 1004 MINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMG 1063

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
              P+V T+++LI G+ ++G  ++   +  +M     SPN  TF  L N
Sbjct: 1064 LEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%)

Query: 156  FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             K+Y +++  L   G  D     F+ ++  G  P++      ++   ++ + + A  L S
Sbjct: 963  LKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFS 1022

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            + +   ++   + YN+L+         D+A  MF+E   +  +P+ +T+N LI+G S+ G
Sbjct: 1023 EMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSG 1082

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTL 302
               +AF  F  M   GCSP+  T+  L
Sbjct: 1083 NKDRAFSVFKKMMIVGCSPNAGTFAQL 1109


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 194/392 (49%), Gaps = 7/392 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++ + C+   +     + D MR++G  PN+      +      G  D A  LL   
Sbjct: 44  TYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNL 103

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  ST  YN++L  L       +A  +  E  R    P+  TFN++I  L R G +
Sbjct: 104 PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 163

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M   GC+ +IVTYN +I+GLC    V     LL ++K      PD+VTY +
Sbjct: 164 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG-CKPDIVTYNT 222

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C   +   A  + + M   G  P  VTFN LI    + G MV A  + ++M   G
Sbjct: 223 LLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 282

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +T+S++I G  +  +L+Q L+L +EM  K  +P+   + +L   L  ++ + +A 
Sbjct: 283 CTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAI 341

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + +++L+ + + P   +YN ++ G C+ G  + A  I+A M    C PD +T+ ILI G 
Sbjct: 342 QTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 401

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             +G + EA  +  K+        D+ VNSLI
Sbjct: 402 AYEGYLNEARELLIKL-----CSRDVLVNSLI 428



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 1/307 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           QP+ +T+N LI  L   G+V+ A     DM   GC+PD+VTYN L+   C+     +  E
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L+  ++ +   +P+ VTY  ++ G C  G +D A  +   + S G KPS V +N ++ G 
Sbjct: 64  LIDLMRAEG-CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
                   A+ +   ML     P+  TF+ +I   CR G L Q ++L ++M     + N+
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  +IN LC++  ++ A   L ++K     P    YN ++ G C A    +A  ++  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M +  C PD VTF  LI   C KG MV+AI +F +M   GC P+ IT +++IS L K   
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 558 PNEAFRI 564
            ++A  +
Sbjct: 303 LDQALEL 309



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 194/408 (47%), Gaps = 2/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +LCE G       V D M   G  P+       + +  +      A  L+   
Sbjct: 9   TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R    T +   YN L++ +  + + D+A+ + +       +P T  +N +++GL      
Sbjct: 69  RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 128

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E   +M    C P+  T+N +I  LCR   + +  +LL+++  K   + ++VTY +
Sbjct: 129 GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS-KHGCTANIVTYNA 187

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G C+   +D A G+ ++M S G KP  VT+N L+ G       V AE + + M   G
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNG 247

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD VTF++LI   C+ G +   +++  +M  K  +PN  T++ +I+ L K  +L+ A 
Sbjct: 248 CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 307

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++      P   +Y  + +       ++EA   V ++++    P  V +  +++G 
Sbjct: 308 ELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 366

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C  G+   AI I   M+  GC PDD+T   LI  L   G  NEA  ++
Sbjct: 367 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 168/349 (48%), Gaps = 2/349 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V  + + YN L++ L ++    +A+ +  +       PD  T+NIL++   +    ++A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           E    M + GC+P+ VTYN L+ G+C   +V    ELL+ +       P  V Y +V+ G
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG-CKPSTVNYNTVLKG 121

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C   +   A  +  EM      P+  TFNV+I    + G +  A  + E+M   G   +
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           +VT++++I+G C    ++  + L  +MK     P++ T+  L+  LC   R  DA   + 
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD 241

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +  N  +P    +N +I   C+ G + +A  +  +M +K C P+ +T++ +I G     
Sbjct: 242 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 301

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++ +A+ +FN+M   G  PD I    L  CL       EA + +++  +
Sbjct: 302 KLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQD 349



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 37/250 (14%)

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++P+A T+N LI    + G +  A  + + ML  G  PDVVT++ L++  C+     Q +
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L D M+ +  +PN  T+ +L++ +C E  ++DA   L+ L  +   P    YN V+ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR------- 535
           C A    +A+ +V EM  + C P++ TF ++I   C KG + +AI +  KM +       
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 536 ----------------------------IGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
                                        GC PD +T N+L+  L       +A  +M  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 568 ASEDQNLQLP 577
            +  QN  LP
Sbjct: 243 MT--QNGCLP 250


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 186/391 (47%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +T N V+R   E G     + VFD M   G  P+       V  C R GK +    LL+ 
Sbjct: 139 ETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAA 198

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 ++       ++ +L ++    +    F+    + + P+   +   I GL +   
Sbjct: 199 MWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRY 258

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           VK+AF    +M   G  P++ T+ TLI GLC++    R   L  ++   S + P+V TYT
Sbjct: 259 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 318

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I GYC+ GK+ +A  +   M   G+KP+  T+  LI G  K G+   A  +  +M   
Sbjct: 319 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 378

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+LP++ T++++IDG+C+ G++ +  K+      + L  +  T+TILI   CK+  +  A
Sbjct: 379 GFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYA 438

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                ++  N   P    Y  +I  +C+   ++E+     +       P K T+T +I G
Sbjct: 439 LDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAG 498

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +C  GR   A+ +F +M++ GC  D I + S
Sbjct: 499 YCKVGRSTMALRVFERMVQNGCFADSILMCS 529



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 178/369 (48%), Gaps = 3/369 (0%)

Query: 184 SDGHLPNS-PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
           + G LP +  ++   V++   AG+   A  ++ + R   + +     N +L   ++  + 
Sbjct: 95  ARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSF 154

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
             A  +F    R    PD  +F  L+    R G+V++       M  +G S D  T   +
Sbjct: 155 VYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVV 214

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           +  LC         E  + +  +    P+VV YT+ I G CK   + +A  +  EM   G
Sbjct: 215 VRSLCEKGRFKDVSEFFRRM-LEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 273

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           +KP+  T   LIDG  K+G    A  +  +++ S  Y P+V T++ +I GYCR G+L + 
Sbjct: 274 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 333

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
             L   M  + L PN  T+T LI   CK    + A   + ++K    +P  + YN VIDG
Sbjct: 334 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 393

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           FCK G + EA  ++     +  K DK+T+TILI  HC +G +  A+ +F++M+  GC PD
Sbjct: 394 FCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 453

Query: 542 DITVNSLIS 550
                SLIS
Sbjct: 454 IEAYTSLIS 462



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 67/159 (42%)

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           ++  +   G+L +   +  EM+   L   V T   ++    +      AR+    +    
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    +  ++   C+ G V+E + ++A M       D  T T+++   C KGR  +  
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
             F +ML +G  P+ +   + I  L K     +AF +++
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLE 267



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 64/164 (39%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  +  TY  ++   C+ G  D    + + M+ +G LPN       +    + GK 
Sbjct: 341 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 400

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A  +L       +      Y  L+    KQ +   A+ +F         PD   +  L
Sbjct: 401 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 460

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           I    +  +++++ +FF      G  P   TY ++I+G C+V  
Sbjct: 461 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGR 504


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 209/460 (45%), Gaps = 56/460 (12%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ ++C+    +    V D MR+ G  PN       ++   R G+ D A+ LL++ 
Sbjct: 179 TYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL 238

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF------------- 264
                   T  Y +LL  L      D+   +F E       P+  TF             
Sbjct: 239 FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMV 298

Query: 265 ----------------------NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                 NI+I  + + G V  AF+F  +MGS+GC+PD ++Y T+
Sbjct: 299 ERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTV 358

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + GLCR        ELLKE+  ++   P+ VT+ + I   C+ G +++A  +  +M   G
Sbjct: 359 LKGLCRAERWNDAKELLKEM-VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHG 417

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                VT+N L++GF   G++ SA    E   S    P+ +T+++L+ G C   +L+   
Sbjct: 418 CTVGVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLDAAA 474

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L  EM  ++  PNV TF +L+N  C++  L++A   ++Q+  +   P    YN + DG 
Sbjct: 475 ELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGI 534

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K  + ++A  ++  +  K   PD +TF+ +I     + R+ EAI +F+    IG  P  
Sbjct: 535 TKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKA 594

Query: 543 ITVNSLISCLLK-----------------GGMPNEAFRIM 565
           +  N ++  L K                 G MPNE+  I+
Sbjct: 595 LVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYII 634



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 195/410 (47%), Gaps = 6/410 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++R LC+ G + D++ ++ D +R  G  PN       + +  +    + A  +L +
Sbjct: 144 TYTPLIRVLCDRGRVADALSLLDDMLRR-GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDE 202

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R    T +   YN ++N + ++   D+A  +    F    QPDT ++  L++GL     
Sbjct: 203 MRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKR 262

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
                E F +M    C P+ VT++ LI   CR   V R  ++L+++  + E + +     
Sbjct: 263 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMT-EHECATNTTLCN 321

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            VI+  CK G++D A    N M S G  P  +++  ++ G  +      A+ + + M+  
Sbjct: 322 IVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRN 381

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+ VTF++ I   C+ G + Q + L ++M+    +  V T+  L+N  C +  ++ A
Sbjct: 382 NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSA 441

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               + +      P    Y  ++ G C A  +D A  +VAEM  + C P+ VTF +L+  
Sbjct: 442 LELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNF 498

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            C KG + EAI +  +M+  GC P+ IT N+L   + K     +A  ++ 
Sbjct: 499 FCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 182/382 (47%), Gaps = 4/382 (1%)

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
           DG  P+  +    + +  R G+   A  +L         +  F YN+L+    +  + D 
Sbjct: 69  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 128

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A  +      +   PD +T+  LI+ L   G V  A     DM   GC P++VTY  L+ 
Sbjct: 129 ARRLIGS---MPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 185

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
            +C+ +   +   +L E++ K   +P++VTY  +I+G C+ G++D A  + N + S G +
Sbjct: 186 AMCKNSGFEQAMAVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  V++  L+ G          E +   M+    +P+ VTF  LI  +CR G + + +++
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             +M     + N     I+IN++CK+ R++DA +FL  +      P    Y  V+ G C+
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           A   ++A  ++ EM    C P++VTF   I   C KG + +AI +  +M   GC    +T
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424

Query: 545 VNSLISCLLKGGMPNEAFRIMQ 566
            N+L++     G  + A  + +
Sbjct: 425 YNALVNGFCVQGHIDSALELFR 446



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 187/380 (49%), Gaps = 4/380 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++R  C  G+ +    V   M       N+ +    ++S  + G+ D A   L+  
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM 343

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T  Y ++L  L +    ++A  + KE  R    P+  TFN  I  L + G +
Sbjct: 344 GSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLI 403

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M   GC+  +VTYN L++G C    +    EL + +  K    P+ +TYT+
Sbjct: 404 EQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK----PNTITYTT 459

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C   ++D A  +  EM      P+ VTFNVL++ F + G +  A  + E+M+  G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++T+++L DG  ++      L+L   +  K +SP+V TF+ +I  L KE+R+ +A 
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +     +   + PK  +YN ++ G CK   +D A   +A M    C P++ T+ ILI G 
Sbjct: 580 QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGL 639

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G + EA  + + +   G
Sbjct: 640 AREGLLKEAQDLLSMLCSRG 659



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 179/357 (50%), Gaps = 5/357 (1%)

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           LS  R GE     ++   L+  L ++    +A  + +      S  D + +N L+ G  R
Sbjct: 64  LSASRDGEAP-DVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCR 122

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G +  A      +GS   +PD  TY  LI  LC    VA    LL ++  +    P+VV
Sbjct: 123 YGHLDAARRL---IGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDM-LRRGCQPNVV 178

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TYT ++   CK    ++A  + +EM + G  P+ VT+NV+I+G  + G +  A  +  R+
Sbjct: 179 TYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL 238

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            S+G  PD V++++L+ G C + + +   +L  EM  KN  PN  TF +LI   C+   +
Sbjct: 239 FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMV 298

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A + L+Q+  ++      + N VI+  CK G VD+A   +  M    C PD +++T +
Sbjct: 299 ERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTV 358

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           + G C   R  +A  +  +M+R  C P+++T N+ I  L + G+  +A  ++++  E
Sbjct: 359 LKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQE 415



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 189/391 (48%), Gaps = 7/391 (1%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++R+LC  G       V       G   +       V+   R G  DAA+ L+       
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---P 137

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V    + Y  L+  L  +    +A+ +  +  R   QP+  T+ +L++ + +    ++A 
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M + GC+P+IVTYN +I+G+CR   V    +LL  + F     PD V+YT+++ G
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL-FSYGCQPDTVSYTTLLKG 256

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C   + D    ++ EM      P+ VTF++LI  F + G +  A  + ++M       +
Sbjct: 257 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATN 316

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
               + +I+  C+ G+++   K  + M     +P+  ++T ++  LC+  R NDA+  LK
Sbjct: 317 TTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLK 376

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++  N+  P    +N  I   C+ G +++A +++ +M+E  C    VT+  L+ G C++G
Sbjct: 377 EMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQG 436

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  A+ +F  M    C P+ IT  +L++ L
Sbjct: 437 HIDSALELFRSM---PCKPNTITYTTLLTGL 464



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 3/244 (1%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +PDV   T +I   C+ G+   A  +       G       +N L+ G+ + G++ +A  
Sbjct: 72  APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA-- 129

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
            R  + S    PD  T++ LI   C  G++   L L D+M  +   PNV T+T+L+ A+C
Sbjct: 130 -RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 188

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K +    A   L +++     P    YN +I+G C+ G VD+A  ++  +    C+PD V
Sbjct: 189 KNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTV 248

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           ++T L+ G C   R  +   +F +M+   C P+++T + LI    +GGM   A +++Q+ 
Sbjct: 249 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQM 308

Query: 569 SEDQ 572
           +E +
Sbjct: 309 TEHE 312



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 141/314 (44%), Gaps = 4/314 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V++ LC     +  + +   M  +   PN      F+    + G  + A  L+ Q 
Sbjct: 354 SYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 413

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    T+    YN+L+N    Q + D A+ +F+    +  +P+T T+  L+ GL     +
Sbjct: 414 QEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS---MPCKPNTITYTTLLTGLCNAERL 470

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E   +M    C P++VT+N L++  C+   +    EL++++  +   +P+++TY +
Sbjct: 471 DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQM-MEHGCTPNLITYNT 529

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +  G  K    + A  + + + S G+ P  +TF+ +I    K   +  A  M       G
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + ++ ++ G C+  +++  +     M      PN  T+ ILI  L +E  L +A+
Sbjct: 590 MRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQ 649

Query: 458 RFLKQLKWNDLVPK 471
             L  L    +V K
Sbjct: 650 DLLSMLCSRGVVSK 663


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 219/500 (43%), Gaps = 51/500 (10%)

Query: 94  WFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVI-KRLDNPKLGLKFLEFSRVNLSL 152
           +F +V+ T L   + +     R LCE      +L+++  R+  P LG     FS      
Sbjct: 130 FFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRM--PHLGCVPDVFS------ 181

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAA 210
                 Y +V++SLC          +   M   G   LPN+      +    + G  + A
Sbjct: 182 ------YCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKA 235

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L ++     ++     YN ++NAL K    D+A  + ++       PD WT+N LI G
Sbjct: 236 CDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYG 295

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE--- 327
            S  G+ K+A      M S G  PD+VT N+L++ LC+  ++    ++   +  K +   
Sbjct: 296 YSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTD 355

Query: 328 -------------------------------FSPDVVTYTSVISGYCKLGKMDKATGIYN 356
                                           +PD   +  +I  Y K G +D+AT I+N
Sbjct: 356 IFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EM   G++P  VT++ +I    ++G M  A     +M+  G  P + T+  LI G+C +G
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG 475

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            L +   L  +M  K + P++  F  +IN LCK  R+ DA+          L P   +YN
Sbjct: 476 DLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYN 535

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++DG+C  G ++ A  +   M     +P+ V +  L+ G+C  GR+ E +S+F ++L  
Sbjct: 536 TLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595

Query: 537 GCAPDDITVNSLISCLLKGG 556
           G  P     N ++  L + G
Sbjct: 596 GIKPSTTLYNIILHGLFQAG 615



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 208/423 (49%), Gaps = 5/423 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +M SLC+ G     + VFD M   G   +    +  ++     G       L +  
Sbjct: 323 TLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLM 382

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +   + ++N L+ A  K    D A  +F E      +PD  T++ +I  L RIG++
Sbjct: 383 LSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKM 442

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   G +P I TY+ LI G C   ++ +  +L+ ++  K    PD+  +  
Sbjct: 443 DDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG-MRPDIGCFNF 501

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CKLG++  A  I++   S G+ P+ + +N L+DG+  VG M +A  + + M+S G
Sbjct: 502 IINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG 561

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV + +L++GYC+ G++++GL L  E+  K + P+   + I+++ L +  R   A+
Sbjct: 562 IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAK 621

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  + +    + Y+ V+ G  K    DEA ++  E+     K D  T  I+I G 
Sbjct: 622 VKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGM 681

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRAS-EDQN 573
               R+ EA  +F  + R G  P  +T + +++ L+K G+  EA   F  M+ A  E  N
Sbjct: 682 FQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPN 741

Query: 574 LQL 576
            QL
Sbjct: 742 SQL 744



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 205/428 (47%), Gaps = 19/428 (4%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS----PMIEFFVSS--- 200
           V   ++    TYN V+ +LC+    D  + +   M   G LP++     +I  + S+   
Sbjct: 243 VQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQW 302

Query: 201 --CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
              +R  K   ++G+L    P  VT+     NSL+ +L K     +A  +F        +
Sbjct: 303 KEAVRVSKKMTSQGIL----PDVVTL-----NSLMASLCKHGKIKDARDVFDSMAMKGQK 353

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            D +++ I++ G +  G +    E F  M S G +PD   +N LI    +   + R   +
Sbjct: 354 TDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATII 413

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             E++ +    PDVVTY++VI+  C++GKMD A   +N+M   G+ PS  T++ LI GF 
Sbjct: 414 FNEMR-EQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFC 472

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
             G+++ A+ +  +M++ G  PD+  F+ +I+  C+ G++     + D      L PNV 
Sbjct: 473 THGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVM 532

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  L++  C   ++ +A R    +    + P   +Y  +++G+CK G +DE   +  E+
Sbjct: 533 VYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREI 592

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
             K  KP    + I++ G    GR V A   F++M   G A D  T + ++  L K    
Sbjct: 593 LHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCS 652

Query: 559 NEAFRIMQ 566
           +EA  + +
Sbjct: 653 DEAILLFK 660



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 180/373 (48%), Gaps = 7/373 (1%)

Query: 183 RSDGHLPNSPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           R+ G    SP +  +   +  C RA +         Q     + + T M ++LL  L + 
Sbjct: 97  RAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEA 156

Query: 240 NNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDI 296
               EA+  +      L   PD +++ I+++ L    +  +A E    M   G  C P+ 
Sbjct: 157 KRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNA 216

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           V YNT+I G  +  +V +  +L  E+  +   SPD+ TY  V++  CK   MDKA  I  
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLFNEM-VQRGISPDLSTYNCVVNALCKARAMDKAEAILR 275

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M   G+ P   T+N LI G+   G    A  + ++M S G LPDVVT +SL+   C++G
Sbjct: 276 QMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHG 335

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++     + D M  K    +++++ I++N    +  L D       +  + + P   ++N
Sbjct: 336 KIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFN 395

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I  + K G +D A +I  EM E+  +PD VT++ +I   C  G+M +A+  FN+M+  
Sbjct: 396 VLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQ 455

Query: 537 GCAPDDITVNSLI 549
           G AP   T + LI
Sbjct: 456 GVAPSISTYHFLI 468



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 6/332 (1%)

Query: 245 AVYMFKEYFRLYS----QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           AV +F    R +      P   T+ IL+   +R    K    FF  +   G   D +  +
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
            L+ GLC     A   ++L          PDV +Y  V+   C   K  +A  +   M  
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207

Query: 361 CGIK--PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
            G    P+AV +N +IDGF K G++  A  +   M+  G  PD+ T++ +++  C+   +
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++   +  +M  K + P+ +T+  LI       +  +A R  K++    ++P     N +
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSL 327

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           +   CK G + +A  +   M  K  K D  ++ I++ G+  KG +V+   +FN ML  G 
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           APD    N LI    K GM + A  I     E
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMRE 419



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 144/324 (44%), Gaps = 2/324 (0%)

Query: 138 LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
           L  K L    +N  +      +N ++ +LC++G     Q +FD+  S G  PN  +    
Sbjct: 478 LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL 537

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +      GK + A  +        +  +  +Y +L+N   K    DE + +F+E      
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P T  +NI++ GL + G    A   F++M   G + D  TY+ ++ GL + +       
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L KE+        D+ T   +I+G  ++ ++++A  ++  ++  G+ PS VT+++++   
Sbjct: 658 LFKELH-AMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNL 716

Query: 378 GKVGNMVSAEYMRERMLSFG-YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
            K G +  A+ M   M + G   P+    + ++       ++ +      ++  ++ S +
Sbjct: 717 IKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLD 776

Query: 437 VYTFTILINALCKENRLNDARRFL 460
             T T+LI+    +    +  RFL
Sbjct: 777 HSTTTLLIDLFSSKGTCREHIRFL 800


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 215/430 (50%), Gaps = 22/430 (5%)

Query: 104 LRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVM 163
           L + ++ +T   +LC++     + E+++++++  +G   +              +YN VM
Sbjct: 439 LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVV--------------SYNNVM 484

Query: 164 RSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVT 223
            + C     D  + VF  M   G  PN+      +  C +         +++Q     + 
Sbjct: 485 LAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIE 544

Query: 224 MSTFMYNSLLNALVKQNNADEA----VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
           ++  +Y +++N L K     +A      M +E     S     ++N +I G  + GE+  
Sbjct: 545 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVS---CMSYNSIIDGFIKEGEMDY 601

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A   + +M + G SP+++TY +L+ GLC+ N + +  E+  E+K K     D+  Y ++I
Sbjct: 602 AVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKG-VKLDIPAYGALI 660

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G+CK   M+ A+ +++E+   G+ PS   +N LI GF  +GNMV+A  + ++ML  G  
Sbjct: 661 HGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLR 720

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            D+ T+++LIDG  + G L     L  EM+   L P+   +T+++N L K+ +     + 
Sbjct: 721 CDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKM 780

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            +++K N++ P   +YN VI G  + GN+DEA  +  EM +K   PD  TF IL+ G   
Sbjct: 781 FEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVG 840

Query: 520 KGRMVEAISI 529
           K + + A S+
Sbjct: 841 KFQPIRAASL 850



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 206/426 (48%), Gaps = 3/426 (0%)

Query: 141 KFLEFSR--VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           K LEF +   +L L  S    + +++   +   H+    +FD     G L N  +    +
Sbjct: 391 KALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFICNTIL 449

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           S   + GK D A  LL +     +  +   YN+++ A  ++ N D A  +F        +
Sbjct: 450 SWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLK 509

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+ +T++ILI G  +  + +   E    M S     + V Y T+I+GLC+V + ++  EL
Sbjct: 510 PNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 569

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +  +  F    ++Y S+I G+ K G+MD A   Y EM + GI P+ +T+  L+DG  
Sbjct: 570 LANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLC 629

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K   M  A  MR+ M + G   D+  + +LI G+C+   +     L  E+  + L+P+  
Sbjct: 630 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQP 689

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  LI+       +  A    K++  + L      Y  +IDG  K GN+  A+ +  EM
Sbjct: 690 VYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEM 749

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           +     PD++ +T+++ G   KG+ V+ + +F +M +    P+ +  N++I+   + G  
Sbjct: 750 QAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 809

Query: 559 NEAFRI 564
           +EAFR+
Sbjct: 810 DEAFRL 815



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 197/414 (47%), Gaps = 36/414 (8%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +F  M ++G  PNS      +    + G+ + A     +     +T S F  ++++   +
Sbjct: 360 LFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWL 419

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K    +EA+ +F E F      + +  N ++  L + G++ KA E    M S G  P++V
Sbjct: 420 KGQKHEEALKLFDESFET-GLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVV 478

Query: 298 TYNTLISGLCR-----------VNEVARG-------HELLKEVKFKSEFSPDV------- 332
           +YN ++   CR            N + +G       + +L +  FK+    +V       
Sbjct: 479 SYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQM 538

Query: 333 ---------VTYTSVISGYCKLGKMDKATGIY-NEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                    V Y ++I+G CK+G+  KA  +  N +       S +++N +IDGF K G 
Sbjct: 539 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGE 598

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  A    E M + G  P+V+T++SL+DG C+N +++Q L++ DEMK K +  ++  +  
Sbjct: 599 MDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 658

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+  CK++ +  A     +L    L P   +YN +I GF   GN+  A  +  +M +  
Sbjct: 659 LIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDG 718

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            + D  T+T LI G   +G ++ A  ++ +M  +G  PD+I    +++ L K G
Sbjct: 719 LRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKG 772



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 178/367 (48%), Gaps = 11/367 (2%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           +P+       + + ++ G  + A     +     ++M+     SL+    K N+   A+ 
Sbjct: 300 VPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALD 359

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +F +       P++ TF++LI+  S+ GE++KA EF+  M S G +P +   +T+I G  
Sbjct: 360 LFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWL 419

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +  +     +L  E  F++  + +V    +++S  CK GK+DKAT +  +M S GI P+ 
Sbjct: 420 KGQKHEEALKLFDE-SFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNV 477

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V++N ++    +  NM  A  +   ML  G  P+  T+S LIDG  +N      L++ ++
Sbjct: 478 VSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQ 537

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF-----MYNPVIDGF 482
           M   N+  N   +  +IN LCK  + + AR  L     N +  K F      YN +IDGF
Sbjct: 538 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA----NMIEEKRFCVSCMSYNSIIDGF 593

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G +D A     EM      P+ +T+T L+ G C   RM +A+ + ++M   G   D 
Sbjct: 594 IKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDI 653

Query: 543 ITVNSLI 549
               +LI
Sbjct: 654 PAYGALI 660



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 177/365 (48%), Gaps = 1/365 (0%)

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           NS    + +++  +  + D A  +++Q     V       N  L+ALV++N+  EA  ++
Sbjct: 161 NSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELY 220

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
                +    D  T  +L++   R  +  +A E F      G  PD + Y+  +   C+ 
Sbjct: 221 SRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKT 280

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             +A  + LL+E+K K    P   TYTSVI    K G M+ A    +EM S GI  + V 
Sbjct: 281 LNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVA 340

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
              LI G  K  ++ SA  +  +M + G  P+ VTFS LI+ + +NG++ + L+   +M+
Sbjct: 341 ATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKME 400

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              L+P+V+    +I    K  +  +A +   +  +   +   F+ N ++   CK G +D
Sbjct: 401 SLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFICNTILSWLCKQGKID 459

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  ++ +ME +   P+ V++  +++ HC K  M  A ++F+ ML  G  P++ T + LI
Sbjct: 460 KATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILI 519

Query: 550 SCLLK 554
               K
Sbjct: 520 DGCFK 524



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/523 (23%), Positives = 234/523 (44%), Gaps = 35/523 (6%)

Query: 59  RASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFW-FVKVVCTLLLRSSYLSDTCARYL 117
           R +   A   F+  A      F++ +V       FW  + ++ T        SD   RY+
Sbjct: 81  RRNNPEAALRFYNWARPWRGSFEDGDV-------FWVLIHILVTSPETYGRASDLLIRYV 133

Query: 118 -CEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQ 176
                +P+ S+ V   +D+ KL                + + +N ++ +  +    D   
Sbjct: 134 STSNPTPMASVLVSNLVDSAKL-----------FGFEVNSRAFNYLLNAYSKDRQTDYAV 182

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            + + M   G +P  P +   +S+ ++      AK L S+     V         L+ A 
Sbjct: 183 DIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRAS 242

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPD 295
           +++    EA+ +F       ++PD+  +++ +Q   +   +  A     +M     C P 
Sbjct: 243 LREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPS 302

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD-----VVTYTSVISGYCKLGKMDK 350
             TY ++I     +  V +G+ +   +++K E   D     VV  TS+I+G+CK   +  
Sbjct: 303 QETYTSVI-----LASVKQGN-MEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGS 356

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  ++ +M + G  P++VTF+VLI+ F K G M  A    ++M S G  P V    ++I 
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G+ +  +  + LKL DE     L+ NV+    +++ LCK+ +++ A   L++++   + P
Sbjct: 417 GWLKGQKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGP 475

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE-AISI 529
               YN V+   C+  N+D A  + + M EK  KP+  T++ILI G C K    +  + +
Sbjct: 476 NVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDG-CFKNHDEQNVLEV 534

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            N+M       + +   ++I+ L K G  ++A  ++    E++
Sbjct: 535 VNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 577


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 197/387 (50%), Gaps = 1/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + ++  LC  G       +F  M   G  PN      F+ S  +  + + + GLL + 
Sbjct: 296 TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEM 355

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V M   MY ++++ L K+   +EA  + +        P+  T+ +L+    R G +
Sbjct: 356 VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNI 415

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +    M     SP++VT++++++GL +   +A+    ++++K  S  +P+VVTY +
Sbjct: 416 DGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMK-DSGIAPNVVTYGT 474

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ K    + A  +Y +M   G++ +    + L++G  K GN+  AE + + M   G
Sbjct: 475 LIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERG 534

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            L D V +++L+DG  + G +   LK+  E+  +NLSP+   + + IN LC+  + ++A+
Sbjct: 535 LLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAK 594

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            FLK+++   L P    YN +I   C+ GN  +A  ++ EM+    KP+ +T+T L++G 
Sbjct: 595 SFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGL 654

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDIT 544
              G + +A  + N+M   G  P  +T
Sbjct: 655 LEAGVVEKAKYLLNEMASAGFTPTPLT 681



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 197/442 (44%), Gaps = 36/442 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++   C++    +   V + M + G   +       V+    +G  DAA  +  + +
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  S   + +L+    K    +EA  +++   R    PD  T + L+ GL R G   
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNE--------VARG------------ 315
           +A+  F +M   G +P+ VTY T I  L    RVNE        V+RG            
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 316 HELLKEVKFKSE-----------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
             L KE K +              +P+ VTYT ++  +C+ G +D A  +  +M    + 
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 365 PSAVTFNVLIDGFGKVGNMV-SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           P+ VTF+ +++G  K G +  +A YMR +M   G  P+VVT+ +LIDG+ +       L 
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMR-KMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           +  +M  + +  N +    L+N L K   + +A    K +    L+     Y  ++DG  
Sbjct: 491 VYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLF 550

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K GN+  A  +  E+ E+   PD V + + I   C  G+  EA S   +M   G  PD  
Sbjct: 551 KTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQA 610

Query: 544 TVNSLISCLLKGGMPNEAFRIM 565
           T N++IS   + G  ++A +++
Sbjct: 611 TYNTMISAQCREGNTSKALKLL 632



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 175/350 (50%), Gaps = 5/350 (1%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           +V   T  YN  L  L +Q +   A  +  E  +     D  T +  + GLSR G V +A
Sbjct: 112 QVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEA 171

Query: 281 FEFFYDMGSFGCSPD---IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                +M   G   D   +V +N LI G C+V ++A    +++ +  +   S DVV Y +
Sbjct: 172 AAL-AEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQG-LSLDVVGYNT 229

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G+   G  D A  +   M + G++PS VT   LI  + K+  +  A  + E M+  G
Sbjct: 230 LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSG 289

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPDVVT S+L+DG CR+G+ ++   L  EM    ++PN  T+   I++L K  R+N++ 
Sbjct: 290 VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESL 349

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L ++    +     MY  V+D   K G ++EA  ++         P+ VT+T+L+  H
Sbjct: 350 GLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAH 409

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           C  G +  A  +  +M     +P+ +T +S+++ L+K G   +A   M++
Sbjct: 410 CRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRK 459



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 179/381 (46%), Gaps = 7/381 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++ +   F++   R GK   AK  L + R   +      YN++++A  ++ N  +A+ +
Sbjct: 572 PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKL 631

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI---SG 305
             E      +P+  T+  L+ GL   G V+KA     +M S G +P  +TY  ++   SG
Sbjct: 632 LNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSG 691

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
                 +   HEL+      +    D+  Y +++   C  G   KAT + +EM   GI P
Sbjct: 692 SRSPYVILEVHELM----MGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP 747

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             +TFN LI G  K  ++ +A     +ML  G  P++ TF++L+ G    G++ +   + 
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVI 807

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            EMK   L PN  T+ IL+    K++   +A R   ++     +PK   YN +I  F KA
Sbjct: 808 CEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKA 867

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +++A  + +EM+ +       T+ IL+ G        E   +   M  +G  P   T+
Sbjct: 868 GMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTI 927

Query: 546 NSLISCLLKGGMPNEAFRIMQ 566
           +S+     K GM  EA R+++
Sbjct: 928 SSMSRAFSKPGMTWEARRLLK 948



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 188/415 (45%), Gaps = 3/415 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+ +  L E G       V   M   G   +   +   +    R G    A  L    
Sbjct: 119 SYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEML 178

Query: 218 RPGEVT--MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             G     +    +N+L++   K  +   A+ + +         D   +N L+ G    G
Sbjct: 179 VRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSG 238

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +   A+E    M + G  P +VT+ TLI   C++  +     L  E   +S   PDVVT 
Sbjct: 239 DADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLY-EGMVRSGVLPDVVTL 297

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           ++++ G C+ G+  +A  ++ EM+  G+ P+ VT+   ID   KV  +  +  +   M+S
Sbjct: 298 SALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS 357

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D+V +++++D   + G++ +   +       N++PN  T+T+L++A C+   ++ 
Sbjct: 358 RGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDG 417

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A + L Q++   + P    ++ +++G  K G + +A   + +M++    P+ VT+  LI 
Sbjct: 418 AEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLID 477

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G         A+ ++  ML  G   ++  V+SL++ L K G   EA  + +   E
Sbjct: 478 GFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGE 532



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 165/378 (43%), Gaps = 1/378 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+ +  LC +G     +     MR+ G  P+       +S+  R G    A  LL++ +
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMK 636

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +   Y +L+  L++    ++A Y+  E       P   T+  ++Q  S      
Sbjct: 637 WSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPY 696

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              E    M   G   DI  YNTL+  LC  + + R   ++ +       +PD +T+ ++
Sbjct: 697 VILEVHELMMGAGLHADITVYNTLVHVLC-CHGMTRKATIVLDEMLGRGIAPDTITFNAL 755

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK   +D A   Y +M   G+ P+  TFN L+ G    G +  A+ +   M   G 
Sbjct: 756 ILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGL 815

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+ +T+  L+ GY +     + L+L  EM  K   P   T+  LI+   K   +N A+ 
Sbjct: 816 EPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKE 875

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++K   ++     Y+ +++G+ K  N  E  +++ +M+E   KP K T + +     
Sbjct: 876 LFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFS 935

Query: 519 MKGRMVEAISIFNKMLRI 536
             G   EA  +   + ++
Sbjct: 936 KPGMTWEARRLLKTLFKV 953



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 9/318 (2%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP----DIVTYNTLISGLCRVNEVARG 315
           D  T N +I     +  ++ A        S G  P    D V+YN  ++GL         
Sbjct: 79  DPLTLNSIILSYCSLHALRPALSLLRS--SSGPQPQVAADTVSYNIFLAGLSEQGHGRLA 136

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGIKP-SAVTFNVL 373
             +L E+  K     D VT ++ + G  + G + +A  +   +    GI     V +N L
Sbjct: 137 PPVLSEM-CKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNAL 195

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           IDG+ KV +M +A  + ERM + G   DVV +++L+ G+  +G  +   ++ + MK   +
Sbjct: 196 IDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGV 255

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+V T T LI   CK  R+ +A    + +  + ++P     + ++DG C+ G   EA  
Sbjct: 256 EPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYA 315

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  EM++    P+ VT+   I       R+ E++ +  +M+  G A D +   +++  L 
Sbjct: 316 LFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLG 375

Query: 554 KGGMPNEAFRIMQRASED 571
           K G   EA  +++ A  D
Sbjct: 376 KEGKIEEAKDVLRHALSD 393


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 4/337 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
            SL+    +     +A  + +      + PD  T+N+LI G  + GE+ KA +    M  
Sbjct: 146 TSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS- 204

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
              +PD+VTYNT++  LC   ++    E+L   + + E  PDV+TYT +I   C    + 
Sbjct: 205 --VAPDVVTYNTILRSLCDSGKLKEAMEVLDR-QMQRECYPDVITYTILIEATCNDSGVG 261

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  + +EM   G KP  VT+NVLI+G  K G +  A      M  +G  P+V+T + ++
Sbjct: 262 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIIL 321

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
              C  G+     +L  +M  K  SP+V TF ILIN LC++  L  A   L+++  +  +
Sbjct: 322 RSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCM 381

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    YNP++ GFC+   +D A   +  M  + C PD VT+  L+   C  G+   A+ I
Sbjct: 382 PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEI 441

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            N++   GC+P  IT N++I  L K G    A  +++
Sbjct: 442 LNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLE 478



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 202/447 (45%), Gaps = 41/447 (9%)

Query: 153 NHSFKTY--NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           + SF+ +  N+ +R L   G  +      + M   G +P+       +    R+GK   A
Sbjct: 102 SRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKA 161

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             ++              YN L+    K    D+A+ + +   R+   PD  T+N +++ 
Sbjct: 162 TRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLE---RMSVAPDVVTYNTILRS 218

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L   G++K+A E         C PD++TY  LI   C  + V +  +LL E++ K    P
Sbjct: 219 LCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMR-KKGCKP 277

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           DVVTY  +I+G CK G++D+A    N M   G +P+ +T N+++      G  + AE + 
Sbjct: 278 DVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLL 337

Query: 391 ERMLSFGYLPDVVTFSSLID-----------------------------------GYCRN 415
             ML  G  P VVTF+ LI+                                   G+C+ 
Sbjct: 338 ADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQE 397

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            ++++ ++  + M  +   P++ T+  L+ ALCK+ + + A   L QL      P    Y
Sbjct: 398 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITY 457

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N VIDG  K G  + A  ++ EM  K  KPD +T++ L+ G   +G++ EAI IF+ M  
Sbjct: 458 NTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEG 517

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAF 562
           +   P  +T N+++  L K    + A 
Sbjct: 518 LSIKPSAVTYNAIMLGLCKAQQTSRAI 544



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 188/368 (51%), Gaps = 3/368 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           +S+     TYN ++RSLC+ G L ++++V+   M+ + +           ++C  +G   
Sbjct: 203 MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQ 262

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           A K LL + R          YN L+N + K+   DEA+           QP+  T NI++
Sbjct: 263 AMK-LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIIL 321

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           + +   G    A     DM   GCSP +VT+N LI+ LCR   + R  ++L+++  K   
Sbjct: 322 RSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP-KHGC 380

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+ ++Y  ++ G+C+  KMD+A      M S G  P  VT+N L+    K G   +A  
Sbjct: 381 MPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVE 440

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  ++ S G  P ++T++++IDG  + G+     +L +EM+ K L P++ T++ L+  L 
Sbjct: 441 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLG 500

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
            E ++++A +    ++   + P    YN ++ G CKA     A   +A M EK CKP K 
Sbjct: 501 CEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKA 560

Query: 509 TFTILIIG 516
           T+TILI G
Sbjct: 561 TYTILIEG 568



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 189/392 (48%), Gaps = 4/392 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++   C+ G  D    V + M      P+       + S   +GK   A  +L + 
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E       Y  L+ A    +   +A+ +  E  +   +PD  T+N+LI G+ + G +
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +F  +M  +GC P+++T+N ++  +C          LL ++  +   SP VVT+  
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADM-LRKGCSPSVVTFNI 354

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  C+   + +A  +  +M   G  P+++++N L+ GF +   M  A    E M+S G
Sbjct: 355 LINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 414

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+++L+   C++G+ +  +++ +++  K  SP + T+  +I+ L K  +   A 
Sbjct: 415 CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAA 474

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             L++++   L P    Y+ ++ G    G VDEA  I  +ME    KP  VT+  +++G 
Sbjct: 475 ELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C   +   AI     M+  GC P   T   LI
Sbjct: 535 CKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 1/290 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C+ G  D      + M   G  PN       + S    G+   A+ LL+  
Sbjct: 281 TYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADM 340

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + S   +N L+N L ++     A+ + ++  +    P++ ++N L+ G  +  ++
Sbjct: 341 LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKM 400

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E+   M S GC PDIVTYNTL++ LC+  +     E+L ++  K   SP ++TY +
Sbjct: 401 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG-CSPVLITYNT 459

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K+GK + A  +  EM   G+KP  +T++ L+ G G  G +  A  +   M    
Sbjct: 460 VIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLS 519

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
             P  VT+++++ G C+  Q ++ +     M  K   P   T+TILI  +
Sbjct: 520 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569


>gi|219363731|ref|NP_001136745.1| hypothetical protein [Zea mays]
 gi|194696880|gb|ACF82524.1| unknown [Zea mays]
 gi|414875980|tpg|DAA53111.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 421

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 202/385 (52%), Gaps = 47/385 (12%)

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           ++RP     S F  N+LL ALV+ +  D A   F+   R    PD +TFNI+I G  + G
Sbjct: 28  RYRP-----SAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTG 82

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE---LLKEVKFKSEFSPDV 332
           +++KA +   ++ ++G +P + TYNTLI G C+  +V + +    LLKE+  ++  SPDV
Sbjct: 83  QLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEM-IQAGISPDV 141

Query: 333 VTYTSVISGY--CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           VT+  +I+GY  C+ GK++ +  +  EM   G+     T N +++GF K G MV AE   
Sbjct: 142 VTFNVLINGYWLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWV 201

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCR-----------NGQLNQGLK---------------- 423
           + +   G  P+V+T+++L+DGY R           +    +G+                 
Sbjct: 202 DGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTS 261

Query: 424 --------LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
                   L DEMK K +  +V T+ +LI ALC +  +  A + L ++    L PK   Y
Sbjct: 262 RDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAY 321

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I+GFC+ G+   A+ I   ME+++ + + VT+ + +   C  G+M EA  + N+ML 
Sbjct: 322 NTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLE 381

Query: 536 IGCAPDDITVNSLISCLL-KGGMPN 559
            G  P+ IT   + S ++ KG +P+
Sbjct: 382 KGLVPNRITYEIINSGMIEKGYVPD 406



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 154/348 (44%), Gaps = 6/348 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRA--GKCDAAKGLL 214
           T+N+V+   C+ G       V   + + G  P+       +   C R   GK      LL
Sbjct: 70  TFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALL 129

Query: 215 SQFRPGEVTMSTFMYNSLLNA--LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            +     ++     +N L+N   L ++   ++++ + +E   L       T N ++ G  
Sbjct: 130 KEMIQAGISPDVVTFNVLINGYWLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFC 189

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G + +A  +   +   G  P+++TYNTL+ G  R+ ++         +  K   SP+V
Sbjct: 190 KKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKG-ISPNV 248

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TY  +I+G+         +G+ +EM   G+K   VT+NVLI      G +  A  + + 
Sbjct: 249 KTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDE 308

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G  P  V ++++I+G+C  G      ++   M+ +    NV T+ + +   CK  +
Sbjct: 309 MVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGK 368

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           +++A   L ++    LVP    Y  +  G  + G V + +   A++ +
Sbjct: 369 MDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDISGYAADVSK 416



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 147/317 (46%), Gaps = 6/317 (1%)

Query: 155 SFKTYNLVMRSLC---EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS--CIRAGKCDA 209
           S  TYN ++   C   ++G    V  +   M   G  P+       ++     R GK + 
Sbjct: 102 SVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYWLCREGKVED 161

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           +  L+ +     +       NS+LN   K+    EA        +   +P+  T+N L+ 
Sbjct: 162 SIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVD 221

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  R+G++K+A      M   G SP++ TYN LI+G     +      LL E+K K    
Sbjct: 222 GYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKG-VK 280

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            DVVTY  +I   C  G++ KA  + +EM   G++P  V +N +I+GF + G+   A  +
Sbjct: 281 ADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEI 340

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           R RM       +VVT++  +  +C+ G++++   + +EM  K L PN  T+ I+ + + +
Sbjct: 341 RLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIE 400

Query: 450 ENRLNDARRFLKQLKWN 466
           +  + D   +   +  N
Sbjct: 401 KGYVPDISGYAADVSKN 417



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 42/95 (44%)

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P  F  N ++    +A  VD A+        +R  PD  TF I+I G C  G++ +A  +
Sbjct: 31  PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 90

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              +   G AP   T N+LI    K G   + + +
Sbjct: 91  AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 125


>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 196/404 (48%), Gaps = 22/404 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY ++M   C  G   + Q VFD M   G  PN           +  G+   A+G+  + 
Sbjct: 41  TYGILMNCCCAQGDFSNAQKVFDEMLERGIEPNV----------VIYGQMGEAEGVFGRM 90

Query: 218 R-PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           R  G VT + + Y +L++      +     Y++ +  +    PD  TF  LI  L ++G+
Sbjct: 91  RESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGD 150

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K A   F  M  F   P+   YN+LI G C+  ++     L  E++    FS DVVTY 
Sbjct: 151 LKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFS-DVVTYN 209

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G C + ++++A G+  +M+   +  ++V FNV+IDG  K+G+M  A  +  +M   
Sbjct: 210 ILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEE 269

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+V+TFS LIDG+C  G +   + L  EM  K + P+V T+T LI+  CK     +A
Sbjct: 270 XIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEA 329

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE----------MEEKRCKPD 506
            R  K++    L P  F  + VIDG  K G  ++A  +  E          M+ + C P+
Sbjct: 330 FRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPN 389

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            + + ILI G C  G + +A   F +M   G  PD +   +++ 
Sbjct: 390 SMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQ 433



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 170/335 (50%), Gaps = 10/335 (2%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+LL+ LVK    D    ++ +       P   T+ IL+      G+   A + F +M  
Sbjct: 8   NALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLE 67

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  P++V Y           ++     +   ++     +P++ TY +++ GY  +G + 
Sbjct: 68  RGIEPNVVIYG----------QMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVK 117

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +   +Y +M   G+ P  VTF  LID   K+G++ +A      M  F  +P+   ++SLI
Sbjct: 118 RVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLI 177

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            GYC+ G L + + L  EM+   +  +V T+ ILI  LC   RL +A   ++++   ++ 
Sbjct: 178 HGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVF 237

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                +N VIDG CK G++++A  + ++M E+  +P+ +TF+ILI G C KG +  A+ +
Sbjct: 238 ANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGL 297

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           + +M+  G  PD +T  +LI    K G   EAFR+
Sbjct: 298 YTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRL 332



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 169/349 (48%), Gaps = 15/349 (4%)

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +F P  +T     Y  L+N    Q +   A  +F E      +P     N++I G  ++G
Sbjct: 34  RFSPTVIT-----YGILMNCCCAQGDFSNAQKVFDEMLERGIEP-----NVVIYG--QMG 81

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           E +  F    + G    +P++ TY TL+ G   + +V R   L  ++  K    PDVVT+
Sbjct: 82  EAEGVFGRMRESGVV--TPNLYTYKTLMDGYSMMGDVKRVFYLYCDM-LKPGLYPDVVTF 138

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I    K+G +  A   +  M    + P+   +N LI G+ K G+++ A ++R  M  
Sbjct: 139 ATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMER 198

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   DVVT++ LI G C   +L + + L ++M    +  N   F ++I+  CK   +  
Sbjct: 199 CGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEK 258

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     Q+    + P    ++ +IDGFC  GNV  A  +  EM  K   PD VT+T LI 
Sbjct: 259 AIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALID 318

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           GHC  G   EA  +  +ML  G +P+  TV+ +I  LLK G  N+A ++
Sbjct: 319 GHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKM 367



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 181/390 (46%), Gaps = 11/390 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +M     MG    V  ++  M   G  P+       +    + G   AA    +  
Sbjct: 102 TYKTLMDGYSMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYM 161

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V  +   YNSL++   K  +  EA+++  E  R     D  T+NILI+GL  I  +
Sbjct: 162 AKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRL 221

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A      M       + V +N +I G C++ ++ +  E+  ++  +    P+V+T++ 
Sbjct: 222 EEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMT-EEXIEPNVITFSI 280

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C  G +  A G+Y EM   GI P  VT+  LIDG  KVGN   A  + + ML  G
Sbjct: 281 LIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAG 340

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKL----------CDEMKGKNLSPNVYTFTILINAL 447
             P++ T S +IDG  ++G+ N  +K+           D+M  +  SPN   + ILI  L
Sbjct: 341 LSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGL 400

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C++  +  A +F  ++KWN   P   +Y  ++    ++ ++ +  ++ A+M +     + 
Sbjct: 401 CEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNT 460

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
             + +L  G+   G +  A+     ++  G
Sbjct: 461 FIYRVLSRGYRENGYLKSALMCSEYLMEYG 490



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 12/279 (4%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P +   N L+ GL +        E+  ++     FSP V+TY  +++  C  G    A  
Sbjct: 2   PTLQPCNALLHGLVKTQMFDSLWEVYVDM-MSRRFSPTVITYGILMNCCCAQGDFSNAQK 60

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGY 412
           +++EM   GI+P+ V +          G M  AE +  RM   G + P++ T+ +L+DGY
Sbjct: 61  VFDEMLERGIEPNVVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGY 110

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
              G + +   L  +M    L P+V TF  LI+ L K   L  A      +   D+VP  
Sbjct: 111 SMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNG 170

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +I G+CKAG++ EA  +  EME      D VT+ ILI G C   R+ EA+ +  K
Sbjct: 171 HAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEK 230

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           M  +    + +  N +I    K G   +A  +  + +E+
Sbjct: 231 MDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEE 269



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 11/159 (6%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P +   ++L+ G  +    +   ++  +M  +  SP V T+ IL+N  C +   ++A++
Sbjct: 1   MPTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQK 60

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTILIIGH 517
              ++    + P   +Y          G + EA  +   M E     P+  T+  L+ G+
Sbjct: 61  VFDEMLERGIEPNVVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGY 110

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M G +     ++  ML+ G  PD +T  +LI  L K G
Sbjct: 111 SMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMG 149


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 202/407 (49%), Gaps = 13/407 (3%)

Query: 161  LVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
            +++R LC E  + + ++++ +     G +P+       +    R G  D  +GLL     
Sbjct: 983  VLVRGLCLERRVEEGLKLI-EARWGAGCIPHVVFYNVLIDGYCRRG--DMGRGLLLL--- 1036

Query: 220  GEVTMSTFM-----YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            GE+  + F+     Y SL+N L K+ + ++   +F E  +    P+   +N +I  L   
Sbjct: 1037 GEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNC 1096

Query: 275  GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
                +A      M + GC PDI+T+NTLI+GLC    V +    L+E   + E +P+ ++
Sbjct: 1097 RSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA-IRRELNPNQLS 1155

Query: 335  YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            YT +I G+C  G++  A+ +  EM   G  P  VTF  LI G    G +  A  +RE+M 
Sbjct: 1156 YTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 1215

Query: 395  SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                 PDV  ++ LI G C+   L     + +EM  KN+ P+ + +  LI+   +   L 
Sbjct: 1216 ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1275

Query: 455  DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            DAR+  + ++   + P     N +I G+C+ G + EA + ++ M +  C PD+ T+T +I
Sbjct: 1276 DARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1335

Query: 515  IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             G+  +G +  A+     M++  C P+ +T +SLI+   K G  + A
Sbjct: 1336 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSA 1382



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 203/407 (49%), Gaps = 3/407 (0%)

Query: 160  NLVMRSLCEMGLHDSVQVVFDYMRS-DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
            N +++ L E    D  + ++D M   D    N          C+     +  K + +++ 
Sbjct: 947  NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1006

Query: 219  PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             G +    F YN L++   ++ +    + +  E       P   T+  LI  L + G+++
Sbjct: 1007 AGCIPHVVF-YNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLE 1065

Query: 279  KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            K    F +M   G SP++  YN++I  LC      +   +LK++ F S   PD++T+ ++
Sbjct: 1066 KIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM-FASGCDPDIITFNTL 1124

Query: 339  ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
            I+G C  G + KA     E     + P+ +++  LI GF   G ++ A  +   M+  G+
Sbjct: 1125 ITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGH 1184

Query: 399  LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             PDVVTF +LI G    G++++ L + ++M  + + P+V  + +LI+ LCK+  L  A+ 
Sbjct: 1185 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKN 1244

Query: 459  FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             L+++   ++ P  F+Y  +IDGF ++ N+ +A  I   ME K   PD V+   +I G+C
Sbjct: 1245 ILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYC 1304

Query: 519  MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              G M EAI   + M ++GC PD+ T  ++IS   K G  N A R +
Sbjct: 1305 QFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 1351



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 206/452 (45%), Gaps = 41/452 (9%)

Query: 139  GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            GLK +E +R           YN+++   C  G      ++   M ++G LP        +
Sbjct: 997  GLKLIE-ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLI 1055

Query: 199  SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
            +   + G  +    L  + R    + +  +YNS+++AL    +A +A+ + K+ F     
Sbjct: 1056 NWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCD 1115

Query: 259  PDTWTFNILIQGLSRIGEVKKAFEFF---------------------------------- 284
            PD  TFN LI GL   G V+KA  F                                   
Sbjct: 1116 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1175

Query: 285  -YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
              +M   G +PD+VT+  LI GL    +V+    +++E   + +  PDV  Y  +ISG C
Sbjct: 1176 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEA-LIVREKMTERQVFPDVNIYNVLISGLC 1234

Query: 344  KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
            K   +  A  I  EM    ++P    +  LIDGF +  N+  A  + E M   G  PD+V
Sbjct: 1235 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIV 1294

Query: 404  TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            + +++I GYC+ G +++ +     M+     P+ +T+T +I+   K+  LN A R+L  +
Sbjct: 1295 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 1354

Query: 464  KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                  P    Y+ +I+G+CK G+ D A  + A M+ +   P+ VT+TILI     K ++
Sbjct: 1355 IKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 1414

Query: 524  VEAISIFNKMLRIGCAPDDIT----VNSLISC 551
            + A   F  ML   C+P+D+T    VN L SC
Sbjct: 1415 LRAGLYFETMLLNHCSPNDVTLHYLVNGLTSC 1446



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 211/467 (45%), Gaps = 16/467 (3%)

Query: 112  TCARYLCEKL-SPLNSLEV---IKRLDNPKLGLKFLEFSRVNLSLNHSFK-------TYN 160
            T AR L   L SPL+   +   +  L +P L +  L +S+   S +H           ++
Sbjct: 820  TWARSLAALLPSPLSDAHLAAAVSSLPDPDLAVALLSWSQ---SPDHHVALQDPTPLAHS 876

Query: 161  LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
             ++R L      D+V      M   G  P    +   V++   AG    A  +  + R  
Sbjct: 877  TLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQ 936

Query: 221  EVTMSTFMY-NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
              ++    + N LL  LV+Q   D+A  ++ E     S  D ++  +L++GL     V++
Sbjct: 937  YGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEE 996

Query: 280  AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
              +        GC P +V YN LI G CR  ++ RG  LL E++  + F P +VTY S+I
Sbjct: 997  GLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME-TNGFLPTLVTYGSLI 1055

Query: 340  SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            +   K G ++K   ++ EM   G  P+   +N +ID      +   A  + ++M + G  
Sbjct: 1056 NWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCD 1115

Query: 400  PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            PD++TF++LI G C  G + +      E   + L+PN  ++T LI+  C    L  A   
Sbjct: 1116 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1175

Query: 460  LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            L ++      P    +  +I G   AG V EA ++  +M E++  PD   + +LI G C 
Sbjct: 1176 LVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 1235

Query: 520  KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            K  +  A +I  +ML     PD+    +LI   ++     +A +I +
Sbjct: 1236 KRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1282



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 192/468 (41%), Gaps = 51/468 (10%)

Query: 131  KRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN 190
            K+ D  K+G  FLE  +   S N   + YN V+ +LC         V+   M + G  P+
Sbjct: 1060 KKGDLEKIGSLFLEMRKRGFSPN--VQIYNSVIDALCNCRSATQAMVILKQMFASGCDPD 1117

Query: 191  SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
                   ++     G    A+  L +    E+  +   Y  L++    +     A  +  
Sbjct: 1118 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLV 1177

Query: 251  EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
            E       PD  TF  LI GL   G+V +A      M      PD+  YN LISGLC+  
Sbjct: 1178 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKR 1237

Query: 311  EVARGHELLKEVKFKS----------------------------EF------SPDVVTYT 336
             +     +L+E+  K+                            EF       PD+V+  
Sbjct: 1238 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCN 1297

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++I GYC+ G M +A    + M   G  P   T+  +I G+ K GN+  A      M+  
Sbjct: 1298 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 1357

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
               P+VVT+SSLI+GYC+ G  +    L   M+ + LSPNV T+TILI +L K++++  A
Sbjct: 1358 KCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 1417

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGF------------CKAGNV---DEANVIVAEMEEK 501
              + + +  N   P     + +++G             C    V   D   V+  ++   
Sbjct: 1418 GLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFD 1477

Query: 502  RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
               P    +  +I   C    + EA+   N+M + G  P+ IT  SL+
Sbjct: 1478 IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 1525



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 160/360 (44%), Gaps = 17/360 (4%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            T+  ++  L   G      +V + M      P+  +    +S   +     AAK +L + 
Sbjct: 1190 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1249

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                V    F+Y +L++  ++  N  +A  +F+        PD  + N +I+G  + G +
Sbjct: 1250 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMM 1309

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             +A     +M   GC PD  TY T+ISG  +   +      L ++  K +  P+VVTY+S
Sbjct: 1310 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM-IKRKCKPNVVTYSS 1368

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I+GYCK G  D A G++  M +  + P+ VT+ +LI    K   ++ A    E ML   
Sbjct: 1369 LINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1428

Query: 398  YLPDVVTFSSLIDGY--CRNGQLNQGLKLCDEMKGKNL-------------SPNVYTFTI 442
              P+ VT   L++G   C    +N       E+ GK+               P    +  
Sbjct: 1429 CSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNA 1488

Query: 443  LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG-NVDEANVIVAEMEEK 501
            +I +LC+ N L +A  F  ++     VP P  +  ++ GFC  G +V+   ++  E +++
Sbjct: 1489 IIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQE 1548



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 1/220 (0%)

Query: 349  DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML-SFGYLPDVVTFSS 407
            D        M+  G  P+      L+  +   G +  A  M ER+   +G LP+V   + 
Sbjct: 889  DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNR 948

Query: 408  LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
            L+       + +   KL DEM GK+   + Y+  +L+  LC E R+ +  + ++      
Sbjct: 949  LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1008

Query: 468  LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             +P    YN +IDG+C+ G++    +++ EME     P  VT+  LI     KG + +  
Sbjct: 1009 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIG 1068

Query: 528  SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            S+F +M + G +P+    NS+I  L       +A  I+++
Sbjct: 1069 SLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQ 1108



 Score = 46.2 bits (108), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA-----KG 212
            TY+ ++   C+ G  DS + +F  M+++   PN       + S  +  K   A       
Sbjct: 1365 TYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETM 1424

Query: 213  LLSQFRPGEVTMSTFM----------YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
            LL+   P +VT+   +           NS+     + +  D  + +FK+       P   
Sbjct: 1425 LLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNS 1484

Query: 263  TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
             +N +I  L R   +++A +F   M   G  P+ +T+ +L+ G C V +      +L   
Sbjct: 1485 AYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNE 1544

Query: 323  KFKSEF 328
              + EF
Sbjct: 1545 FQQEEF 1550


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 195/435 (44%), Gaps = 36/435 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           +YN++++SLC  G       +   M   G + +  ++ +   +    + G  + A  L  
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +      Y+S+++AL K    D+A    ++       PD WT+N LI G S  G
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-------- 327
           + K+A   F +M      PD+V  NTL+  LC+  ++    ++   +  K +        
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365

Query: 328 --------------------------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                                      +PD+ T+  +I  Y   G +DKA  I+NEM   
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 425

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+KP  VT+  +I    ++G M  A     +M+  G +PD   +  LI G+C +G L + 
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +L  E+    +  ++  F  +IN LCK  R+ DA+          L P   +YN ++DG
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +C  G +++A  +   M     +P+ V +  L+ G+C  GR+ E +S+F +ML+ G  P 
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605

Query: 542 DITVNSLISCLLKGG 556
            I  N +I  L + G
Sbjct: 606 TILYNIIIDGLFEAG 620



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 213/442 (48%), Gaps = 7/442 (1%)

Query: 127 LEVIKRLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRS 184
           ++   R   P+L L F  +  R  L ++    ++  +++  CE    D ++ ++      
Sbjct: 120 MDCCTRAHRPELALAFFGQLLRTGLRVDAIIASH--LLKGFCEAKRTDEALDILLHRTPE 177

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNA 242
            G +P+       + S    GK   A  LL     G    S     YN++++   K+ + 
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++A  +FKE  +    PD  T++ ++  L +   + KA  F   M + G  PD  TYN L
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G     +      + KE++ +S   PDVV   +++   CK GK+ +A  +++ M   G
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQS-ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P   ++ ++++G+   G +V    + + ML  G  PD+ TF+ LI  Y   G L++ +
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM+   + P+V T+  +I ALC+  +++DA     Q+    +VP  + Y+ +I GF
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G++ +A  +++E+     + D V F  +I   C  GR+++A +IF+  + +G  PD 
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536

Query: 543 ITVNSLISCLLKGGMPNEAFRI 564
           +  N L+      G   +A R+
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRV 558



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 196/412 (47%), Gaps = 4/412 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N +M SLC+ G     + VFD M   G  P+       ++     G       L      
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +    + +N L+ A       D+A+ +F E      +P   T+  +I  L RIG++  
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A E F  M   G  PD   Y+ LI G C    + +  EL+ E+   +    D+V + S+I
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI-MNNGMRLDIVFFGSII 508

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +  CKLG++  A  I++   + G+ P AV +N+L+DG+  VG M  A  + + M+S G  
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 568

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+VV + +L++GYC+ G++++GL L  EM  K + P+   + I+I+ L +  R   A+  
Sbjct: 569 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++  + +      Y+ V+ G  K    DEA  +  E+     K D +T   +I G   
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRA 568
             R+ EA  +F  + R G  P  +T + +I+ LLK G+  EA   F  MQ A
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNA 740



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 176/365 (48%), Gaps = 4/365 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-Y 247
           P S      +  C RA + + A     Q     + +   + + LL    +    DEA+  
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISG 305
           +      L   PD +++NIL++ L   G+  +A +    M   G  CSPD+V YNT+I G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             +  +V +  +L KE+  +    PD+VTY+SV+   CK   MDKA     +M + G+ P
Sbjct: 231 FFKEGDVNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
              T+N LI G+   G    A  + + M     LPDVV  ++L+   C+ G++ +   + 
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K  +P+V+++TI++N    +  L D       +  + + P  + +N +I  +   
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 409

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D+A +I  EM +   KP  VT+  +I   C  G+M +A+  FN+M+  G  PD    
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 546 NSLIS 550
           + LI 
Sbjct: 470 HCLIQ 474



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 185/397 (46%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y +++      G    +  +FD M  DG  P+       + +    G  D A  + ++ 
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      Y +++ AL +    D+A+  F +       PD + ++ LIQG    G +
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E   ++ + G   DIV + ++I+ LC++  V     +  ++       PD V Y  
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYNM 541

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC +GKM+KA  +++ M S GI+P+ V +  L++G+ K+G +     +   ML  G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + ++ +IDG    G+         EM    ++ N  T++I++  L K    ++A 
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+L+  ++       N +I G  +   V+EA  + A +      P  VT++I+I   
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +G + EA  +F+ M   GC PD   +N ++  LLK
Sbjct: 722 LKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 187/408 (45%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++++    G+ D   ++F+ MR  G  P+       +++  R GK D A    +Q 
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    + Y+ L+       +  +A  +  E      + D   F  +I  L ++G V
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F    + G  PD V YN L+ G C V ++ +   +  +    +   P+VV Y +
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVGYGT 576

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYCK+G++D+   ++ EM   GIKPS + +N++IDG  + G  V A+     M   G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +  T+S ++ G  +N   ++ + L  E++  N+  ++ T   +I  + +  R+ +A+
Sbjct: 637 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 696

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  + LVP    Y+ +I    K G V+EA  + + M+   C+PD      ++   
Sbjct: 697 DLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 756

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             K  +V A +  +K+     + + +T   L+      G   E  R +
Sbjct: 757 LKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 156/341 (45%), Gaps = 37/341 (10%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFF---------------------------------- 284
           P ++T+ IL+   +R    + A  FF                                  
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 285 --YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF-SPDVVTYTSVISG 341
             +     GC PD+ +YN L+  LC   +  +  +LL+ +       SPDVV Y +VI G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           + K G ++KA  ++ EM   GI P  VT++ ++    K   M  AE    +M++ G LPD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T+++LI GY   GQ  + +++  EM+ +++ P+V     L+ +LCK  ++ +AR    
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
            +      P  F Y  +++G+   G + +   +   M      PD  TF +LI  +   G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            + +A+ IFN+M   G  P  +T  ++I+ L + G  ++A 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 73/310 (23%)

Query: 328 FSPDVVTY-----------------------------------TSVISGYCKLGKMDKAT 352
            SP   TY                                   + ++ G+C+  + D+A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 353 GI-YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL--PDVVTFSSLI 409
            I  +     G  P   ++N+L+      G    A+ +   M   G +  PDVV ++++I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DG+ + G +N+   L  EM  + + P++ T++ +++ALCK   ++ A  FL+Q+    ++
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 470 PKPFMYNPVIDGF-----------------------------------CKAGNVDEANVI 494
           P  + YN +I G+                                   CK G + EA  +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
              M  K   PD  ++TI++ G+  KG +V+   +F+ ML  G APD  T N LI     
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 555 GGMPNEAFRI 564
            GM ++A  I
Sbjct: 409 CGMLDKAMII 418



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 6/213 (2%)

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P++ T+ +L+D   +      A     ++L  G   D +  S L+ G+C   + ++ L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 423 K-LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV--PKPFMYNPVI 479
             L          P+V+++ IL+ +LC + +   A   L+ +     V  P    YN VI
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DGF K G+V++A  +  EM ++   PD VT++ ++   C    M +A +   +M+  G  
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 540 PDDITVNSLISCLLKGGMPNEAFRI---MQRAS 569
           PD+ T N+LI      G   EA R+   M+R S
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 10/274 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN+ L+     YN++M   C +G  +    VFD M S G  PN       V+   + G+ 
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    L  +     +  ST +YN +++ L +      A   F E        +  T++I+
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++GL +     +A   F ++ +     DI+T NT+I+G+ +   V    +L   +  +S 
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS-RSG 706

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
             P  VTY+ +I+   K G +++A  +++ M + G +P +   N ++    K   +V A 
Sbjct: 707 LVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAG 766

Query: 387 ---EYMRERMLSFGYLPDVV---TFSSLIDGYCR 414
                + ER  S  +L  ++    FSS   G CR
Sbjct: 767 AYLSKIDERNFSLEHLTAMLLVDLFSS--KGTCR 798


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 204/445 (45%), Gaps = 41/445 (9%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + +   +R L   G  D VQ     MR  G       +   + +  RAG  D A     +
Sbjct: 56  RAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYR 115

Query: 217 FRP--GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            R   G    +  +YN LL+AL+++N     V ++    +   +P+ +T+N+LI+ L + 
Sbjct: 116 ARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQN 175

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV--ARG----------------H 316
             V  A     +M   GC PD V++ T+IS LC+++ +  ARG                H
Sbjct: 176 DRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVH 235

Query: 317 ELLKEVKFKSEF-----------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
            L  + + +  F            PD V YTS++  +CK  ++  A  I   M + G  P
Sbjct: 236 ALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVP 295

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +  TF VL+ GF   G +  A  M   M++ G+ P  ++++ LI G C  G L + L + 
Sbjct: 296 NVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVF 355

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV-----PKPFMYNPVID 480
             M   +  P+V T++ LI+   K   L+ A        WND+      P   +Y  ++D
Sbjct: 356 SCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSI-----WNDMTNAGCKPNVVVYTNMVD 410

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
             CK    D+A  ++ +M  + C P+ +TF  LI   C  GR   A+++F+ M R GC P
Sbjct: 411 VLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPP 470

Query: 541 DDITVNSLISCLLKGGMPNEAFRIM 565
           +D T N L+  L + G   +A R++
Sbjct: 471 NDRTYNELLHGLFREGNCEDALRML 495



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 194/425 (45%), Gaps = 31/425 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS-- 215
           TYNL++++LC+     + + + D M   G  P+       +S+  +  + D A+G+L+  
Sbjct: 164 TYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM 223

Query: 216 ----------------QFRPGEVTM------------STFMYNSLLNALVKQNNADEAVY 247
                           QFR  EV +             T  Y S++ A  K      A  
Sbjct: 224 TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACA 283

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +          P+  TF +L++G    G+V  A   +  M + G +P  ++YN LI GLC
Sbjct: 284 ILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLC 343

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
            + ++ R   +   +  KS+  PDV TY+++I G+ K G +D A  I+N+M + G KP+ 
Sbjct: 344 HIGDLKRALFVFSCMG-KSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNV 402

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V +  ++D   K      AE + ++M      P+ +TF++LI   C  G+  + L +   
Sbjct: 403 VVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHG 462

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+     PN  T+  L++ L +E    DA R L ++  +        YN  I G C+   
Sbjct: 463 MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRM 522

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           + EA +++  M  +  +PD  TF  +I  +C +G +  A  +  +M  + C  + +   S
Sbjct: 523 IKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTS 582

Query: 548 LISCL 552
           L+S L
Sbjct: 583 LMSGL 587



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 167/371 (45%), Gaps = 14/371 (3%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY-----SQ 258
           AG  D  +  L + R   V        + + A  +   AD A    K ++R       + 
Sbjct: 68  AGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRA---LKTFYRARHDLGCAA 124

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P    +N L+  L R   V      + +M   G  P++ TYN LI  LC+ + V     +
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E+  K    PD V++T++IS  CKL ++D+A GI  EM      P   ++N ++    
Sbjct: 185 LDEMARKG-CRPDEVSHTTIISALCKLDRLDEARGILAEMT-----PVGASYNAVVHALC 238

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
               M     + + M+  G  PD V ++S++  +C+  +L     +   M  +   PNV 
Sbjct: 239 GQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQ 298

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TFT+L+     + +++DA      +      P    YN +I G C  G++  A  + + M
Sbjct: 299 TFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCM 358

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +  C PD  T++ LI G    G +  A+SI+N M   GC P+ +   +++  L K  M 
Sbjct: 359 GKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMF 418

Query: 559 NEAFRIMQRAS 569
           ++A  ++ + S
Sbjct: 419 DQAENLIDKMS 429



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 170/369 (46%), Gaps = 1/369 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  L      Y  ++ + C+         +   M ++G +PN       V      GK 
Sbjct: 254 VHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKV 313

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             A G+ +         ST  YN L+  L    +   A+++F    +    PD  T++ L
Sbjct: 314 HDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTL 373

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G S+ G++  A   + DM + GC P++V Y  ++  LC+     +   L+ ++  ++ 
Sbjct: 374 IDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLEN- 432

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P+ +T+ ++I   C LG+  +A  +++ M   G  P+  T+N L+ G  + GN   A 
Sbjct: 433 CPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDAL 492

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            M   ML+ G+   +V++++ I G C+   + + + L   M  + + P+ +TF  +I+A 
Sbjct: 493 RMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAY 552

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CKE  +  A   L ++   +       Y  ++ G C    +D+A V + +M  +   P++
Sbjct: 553 CKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNE 612

Query: 508 VTFTILIIG 516
            T+ +L+ G
Sbjct: 613 ATWNVLVRG 621



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)

Query: 152 LNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           LNH F+    +YN  +  LC+M +     ++   M   G  P++      + +  + G  
Sbjct: 499 LNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNV 558

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA-VYMFKEYFRLYSQPDTWTFNI 266
            AA  +L +        +   Y SL++ L  Q+  D+A VY+ K  +     P+  T+N+
Sbjct: 559 RAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGIC-PNEATWNV 617

Query: 267 LIQGL 271
           L++G+
Sbjct: 618 LVRGI 622


>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
 gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
          Length = 693

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 191/371 (51%), Gaps = 6/371 (1%)

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           ++M S G   N+ ++  F+      G  D    LL   +   +      +   ++ L K 
Sbjct: 260 EHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKA 319

Query: 240 NNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
               EA   +FK      SQ D+ + + +I G  ++G+ ++A +  +   SF   P+I  
Sbjct: 320 GFLKEATSVLFKLKLFGISQ-DSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFV 375

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y++ +S +C   ++ R   + +E+ F+    PD V YT++I GYC LG+ DKA   +  +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEI-FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G  PS  T  +LI    + G++  AE +   M + G   DVVT+++L+ GY +  QL
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           N+  +L DEM+   +SP+V T+ ILI+++     +++A   + +L     VP    +  V
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I GF K G+  EA ++   M + R KPD VT + L+ G+C   RM +AI +FNK+L  G 
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614

Query: 539 APDDITVNSLI 549
            PD +  N+LI
Sbjct: 615 KPDVVLYNTLI 625



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 167/359 (46%), Gaps = 4/359 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            + + +  LC+ G       V   ++  G   +S  +   +    + GK + A  L+  F
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + F+Y+S L+ +    +   A  +F+E F L   PD   +  +I G   +G  
Sbjct: 368 R---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF++F  +   G  P + T   LI    R   ++    + + +K +     DVVTY +
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG-LKLDVVTYNN 483

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY K  +++K   + +EM S GI P   T+N+LI      G +  A  +   ++  G
Sbjct: 484 LMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG 543

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++P  + F+ +I G+ + G   +   L   M    + P+V T + L++  CK  R+  A 
Sbjct: 544 FVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAI 603

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +L    L P   +YN +I G+C  G++++A  ++  M ++   P++ T   L++G
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 167/366 (45%), Gaps = 4/366 (1%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +  CIR  K + A  L  +     +  S  +  SLL  +++ +  + A    +      
Sbjct: 207 LIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRG 266

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
              +    ++ I+     G   K +E    M  +G  PDIV +   I  LC+   +    
Sbjct: 267 RHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEAT 326

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            +L ++K     S D V+ +SVI G+CK+GK ++A  +   ++S  ++P+   ++  +  
Sbjct: 327 SVLFKLKLFG-ISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSN 382

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
               G+M+ A  + + +   G LPD V ++++IDGYC  G+ ++  +    +      P+
Sbjct: 383 ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           + T TILI A  +   ++DA    + +K   L      YN ++ G+ K   +++   ++ 
Sbjct: 443 LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELID 502

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM      PD  T+ ILI    ++G + EA  I ++++R G  P  +    +I    K G
Sbjct: 503 EMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG 562

Query: 557 MPNEAF 562
              EAF
Sbjct: 563 DFQEAF 568



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 138/308 (44%), Gaps = 15/308 (4%)

Query: 150 LSLNHSFK------TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           + L HSF+       Y+  + ++C  G       +F  +   G LP+       +     
Sbjct: 361 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420

Query: 204 AGKCDAA----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
            G+ D A      LL    P  +T ST     L+ A  +  +  +A  +F+       + 
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTTSTI----LIGACSRFGSISDAESVFRNMKTEGLKL 476

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  T+N L+ G  +  ++ K FE   +M S G SPD+ TYN LI  +     +   +E++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+  +  F P  + +T VI G+ K G   +A  ++  M    +KP  VT + L+ G+ K
Sbjct: 537 SEL-IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK 595

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              M  A  +  ++L  G  PDVV +++LI GYC  G + +  +L   M  + + PN  T
Sbjct: 596 AQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655

Query: 440 FTILINAL 447
              L+  L
Sbjct: 656 HHALVLGL 663


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 14/412 (3%)

Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL----LSQ 216
           +++ LC +    D++ +V   M   G +PN      F  + +  G CD  +      L Q
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPN-----VFSYNILLKGLCDENRSQEALELLQ 186

Query: 217 FRP---GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             P   G+       Y +++N   K+ + D+A   + E       P+  T+N +I  L +
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCK 246

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              + KA E    M   G  P+  TYN+++ G C   +       LK++       PDVV
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH-SDGVEPDVV 305

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S++   CK G+  +A  +++ M   G+KP   T+  L+ G+   G +V    + + M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  P+   FS LI  Y + G+++Q + +  +M+ + L+P+  T+  +I  LCK  R+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA R+ +Q+    L P   +YN +I   C     D+A  ++ EM ++    D + F  +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I  HC +GR++E+  +F+ M+RIG  P+ IT ++LI      G  +EA +++
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLL 537



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 193/395 (48%), Gaps = 3/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN++++ LC+         +   M  DG    P+       ++   + G  D A G   
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  +   YNS++ AL K    D+A+ +     +    P+  T+N ++ G    G
Sbjct: 224 EMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + K+A  F   M S G  PD+VTYN+L+  LC+        ++   +  K    P++ TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT-KRGLKPEITTY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ GY   G + +  G+ + M   GI P+   F++LI  + K G +  A  +  +M  
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD VT+ ++I   C++G++   ++  ++M  + LSP    +  LI++LC  ++ + 
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+  + ++    +      +N +ID  CK G V E+  +   M     KP+ +T++ LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLID 522

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           G+C+ G+M EA  +   M+ +G  PD +T N+LI+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 169/327 (51%), Gaps = 6/327 (1%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF-FYDMGSFGCSPDIVTYNTLISGL 306
           + K+ FR+    D   F  L++GL        A +     M   GC P++ +YN L+ GL
Sbjct: 117 VIKKGFRV----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGL 172

Query: 307 CRVNEVARGHELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           C  N      ELL+ +     +  PDVV+YT+VI+G+ K G +DKA G Y+EM   GI P
Sbjct: 173 CDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILP 232

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           + VT+N +I    K   M  A  +   M+  G +P+  T++S++ GYC +GQ  + +   
Sbjct: 233 NVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            +M    + P+V T+  L++ LCK  R  +AR+    +    L P+   Y  ++ G+   
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G + E + ++  M      P+   F+ILI  +  +G++ +A+ +F+KM + G  PD +T 
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQ 572
            ++I  L K G   +A R  ++  +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDER 439



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 189/439 (43%), Gaps = 36/439 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +LC+    D    V   M  +G +PN       V     +G+   A G L + 
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS----- 272
               V      YNSL++ L K     EA  MF    +   +P+  T+  L+QG +     
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 273 ------------------------------RIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                         + G+V +A   F  M   G +PD VTY T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I  LC+   V       +++      SP  + Y S+I   C   K DKA  +  EM   G
Sbjct: 416 IGILCKSGRVEDAMRYFEQM-IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I    + FN +ID   K G ++ +E + + M+  G  P+++T+S+LIDGYC  G++++  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL   M    + P+  T+  LIN  CK +R+ DA    ++++ + + P    YN ++ G 
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            +      A  +   + E   + +  T+ I++ G C      EA+ +F  +       + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 543 ITVNSLISCLLKGGMPNEA 561
            T N +I  LLK G  +EA
Sbjct: 655 RTFNIMIGALLKVGRNDEA 673



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 187/405 (46%), Gaps = 1/405 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L     TY  +++     G    +  + D M  +G  PN  +    + +  + GK D A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + S+ R   +   T  Y +++  L K    ++A+  F++       P    +N LI  L
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
               +  KA E   +M   G   D + +N++I   C+   V    +L  ++  +    P+
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPN 513

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           ++TY+++I GYC  GKMD+AT +   M S G+KP  VT+N LI+G+ K+  M  A  +  
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M S G  PD++T++ ++ G  +  +     +L   +        + T+ I+++ LCK N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
             ++A R  + L   DL  +   +N +I    K G  DEA  + A +      PD  T++
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++      +G + E   +F  M   GC  +   +NS++  LL+ G
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 190/407 (46%), Gaps = 2/407 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +++++ +  + G  D   +VF  MR  G  P++      +    ++G+ + A     Q  
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++    +YNSL+++L   +  D+A  +  E        DT  FN +I    + G V 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           ++ + F  M   G  P+I+TY+TLI G C   ++    +LL  +       PD VTY ++
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASM-VSVGMKPDCVTYNTL 555

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+GYCK+ +M+ A  ++ EM S G+ P  +T+N+++ G  +     +A+ +   +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             ++ T++ ++ G C+N   ++ L++   +   +L     TF I+I AL K  R ++A+ 
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               L  N LVP    Y+ + +   + G ++E + +   MEE  C  +      ++    
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +G +  A   +  M+       + +  SL   LL GG   E  R +
Sbjct: 736 QRGDITRA-GTYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRFL 781



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
           DE+  +    ++Y     +  + + +      R+  + +   +++ P    Y  +I   C
Sbjct: 43  DELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCC 102

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
            AG +D     +  + +K  + D + FT L+ G C   R  +A+ I   +M ++GC P+ 
Sbjct: 103 CAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
            + N L+  L       EA  ++Q   +D
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDD 191


>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
 gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 191/371 (51%), Gaps = 6/371 (1%)

Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           ++M S G   N+ ++  F+      G  D    LL   +   +      +   ++ L K 
Sbjct: 260 EHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKA 319

Query: 240 NNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
               EA   +FK      SQ D+ + + +I G  ++G+ ++A +  +   SF   P+I  
Sbjct: 320 GFLKEATSVLFKLKLFGISQ-DSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFV 375

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y++ +S +C   ++ R   + +E+ F+    PD V YT++I GYC LG+ DKA   +  +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEI-FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G  PS  T  +LI    + G++  AE +   M + G   DVVT+++L+ GY +  QL
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           N+  +L DEM+   +SP+V T+ ILI+++     +++A   + +L     VP    +  V
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I GF K G+  EA ++   M + R KPD VT + L+ G+C   RM +AI +FNK+L  G 
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614

Query: 539 APDDITVNSLI 549
            PD +  N+LI
Sbjct: 615 KPDVVLYNTLI 625



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 167/359 (46%), Gaps = 4/359 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            + + +  LC+ G       V   ++  G   +S  +   +    + GK + A  L+  F
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +  + F+Y+S L+ +    +   A  +F+E F L   PD   +  +I G   +G  
Sbjct: 368 R---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF++F  +   G  P + T   LI    R   ++    + + +K +     DVVTY +
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG-LKLDVVTYNN 483

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY K  +++K   + +EM S GI P   T+N+LI      G +  A  +   ++  G
Sbjct: 484 LMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG 543

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++P  + F+ +I G+ + G   +   L   M    + P+V T + L++  CK  R+  A 
Sbjct: 544 FVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAI 603

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               +L    L P   +YN +I G+C  G++++A  ++  M ++   P++ T   L++G
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 167/366 (45%), Gaps = 4/366 (1%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +  CIR  K + A  L  +     +  S  +  SLL  +++ +  + A    +      
Sbjct: 207 LIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRG 266

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
              +    ++ I+     G   K +E    M  +G  PDIV +   I  LC+   +    
Sbjct: 267 RHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEAT 326

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            +L ++K     S D V+ +SVI G+CK+GK ++A  +   ++S  ++P+   ++  +  
Sbjct: 327 SVLFKLKLFG-ISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSN 382

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
               G+M+ A  + + +   G LPD V ++++IDGYC  G+ ++  +    +      P+
Sbjct: 383 ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           + T TILI A  +   ++DA    + +K   L      YN ++ G+ K   +++   ++ 
Sbjct: 443 LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELID 502

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM      PD  T+ ILI    ++G + EA  I ++++R G  P  +    +I    K G
Sbjct: 503 EMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG 562

Query: 557 MPNEAF 562
              EAF
Sbjct: 563 DFQEAF 568



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 138/308 (44%), Gaps = 15/308 (4%)

Query: 150 LSLNHSFK------TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           + L HSF+       Y+  + ++C  G       +F  +   G LP+       +     
Sbjct: 361 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420

Query: 204 AGKCDAA----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
            G+ D A      LL    P  +T ST     L+ A  +  +  +A  +F+       + 
Sbjct: 421 LGRTDKAFQYFGALLKSGNPPSLTTSTI----LIGACSRFGSISDAESVFRNMKTEGLKL 476

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  T+N L+ G  +  ++ K FE   +M S G SPD+ TYN LI  +     +   +E++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+  +  F P  + +T VI G+ K G   +A  ++  M    +KP  VT + L+ G+ K
Sbjct: 537 SEL-IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK 595

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              M  A  +  ++L  G  PDVV +++LI GYC  G + +  +L   M  + + PN  T
Sbjct: 596 AQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655

Query: 440 FTILINAL 447
              L+  L
Sbjct: 656 HHALVLGL 663


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 199/413 (48%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY ++ +SL   G         + MR  G + N+      +   +++G C  A  +  + 
Sbjct: 161 TYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRM 220

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S   +++L+ A  K+ N    + + +E   +  +P+ +T+ I I+ L R G++
Sbjct: 221 VSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKI 280

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A+     M   GC PD+VTY  LI  LC   ++     L  ++K  S   PD VTY +
Sbjct: 281 DEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMK-SSSHKPDKVTYVT 339

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++  +   G +DK   I+ EM + G  P  VTF +L++   K G +  A  + + M   G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP++ T+++LI G  R  +L+  L L   M+   + P  YT+ +LI+   K      A 
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +++K   + P     N  +    + G + EA  +  E++     PD VT+ +++  +
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
              G++ EAI + ++M ++ C PD I +NSLI  L K G   EA+++  R  E
Sbjct: 520 SKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 200/419 (47%), Gaps = 1/419 (0%)

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           H+ +T N ++  L      + +  VFD M+      N         S    G    A   
Sbjct: 122 HTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSA 181

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L + R     ++ + YN L++ L++     EA+ +++       +P   TF+ L+    +
Sbjct: 182 LEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGK 241

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              +K       +M S G  P+I TY   I  L R  ++   + ++K +       PDVV
Sbjct: 242 RRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD-DDGCGPDVV 300

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TYT +I   C   K+D A  ++ +M S   KP  VT+  L+D F   G++   E +   M
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + GY PDVVTF+ L++  C+ G++N+   L D M+ + + PN++T+  LI+ L + NRL
Sbjct: 361 EADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRL 420

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +DA      ++   + P  + Y  +ID   K+G+  +A     +M+ +   P+ V     
Sbjct: 421 DDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNAS 480

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +      GR+ EA ++FN++   G APD +T N ++ C  K G  +EA +++   S+ Q
Sbjct: 481 LYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ 539



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 212/422 (50%), Gaps = 1/422 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V+  L  S KT++ +M +  +     +V  + + M S G  PN       +    R GK 
Sbjct: 221 VSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKI 280

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  ++ +            Y  L++AL      D+A+ +F +      +PD  T+  L
Sbjct: 281 DEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTL 340

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           +   S  G + K  + + +M + G +PD+VT+  L++ LC+   +    +LL  ++ K  
Sbjct: 341 LDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR-KQG 399

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             P++ TY ++ISG  +  ++D A  +++ M S G++P+A T+ +LID  GK G+   A 
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              E+M + G  P++V  ++ +      G+L +   + +E+K   L+P+  T+ +++   
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
            K  ++++A + L ++      P   + N +ID   KAG V+EA  +   MEE    P  
Sbjct: 520 SKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTV 579

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+ IL+ G   +G++ +A+ +F  M   GC+P+ IT N+L+ CL K    + A ++  +
Sbjct: 580 VTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYK 639

Query: 568 AS 569
            +
Sbjct: 640 MT 641



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 212/459 (46%), Gaps = 16/459 (3%)

Query: 108 YLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLC 167
           Y    C R L        +  ++KR+D+   G   +              TY +++ +LC
Sbjct: 265 YTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVV--------------TYTVLIDALC 310

Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
                D    +F  M+S  H P+       +      G  D  + + ++           
Sbjct: 311 TARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVV 370

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            +  L+NAL K    +EA  +     +    P+  T+N LI GL R   +  A + F +M
Sbjct: 371 TFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
            S G  P   TY  LI    +     +  E  +++K +   +P++V   + +    ++G+
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG-IAPNIVACNASLYSLAEMGR 489

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           + +A  ++NE+ S G+ P +VT+N+++  + KVG +  A  +   M      PDV+  +S
Sbjct: 490 LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINS 549

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LID   + G++ +  ++   M+  NL+P V T+ IL+  L KE ++  A +  + +  + 
Sbjct: 550 LIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG 609

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    +N ++D  CK   VD A  +  +M    C+PD +TF  +I G   + ++  AI
Sbjct: 610 CSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAI 669

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +F++M ++   PD +T+ +L+  ++K G   +AFRI +
Sbjct: 670 WLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITE 707



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 176/321 (54%), Gaps = 1/321 (0%)

Query: 228  MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
            +YN L++  ++ +N + A  +F+E       PDT+T+N LI    + G++ + F+ + +M
Sbjct: 792  VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEM 851

Query: 288  GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
             + GC P+ +TYN +IS L + N + +  +L   +    +FSP   T+  +I G  K G+
Sbjct: 852  LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL-VSGDFSPTPCTFGPLIDGLLKSGR 910

Query: 348  MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
            +D A  +++ M   G +P++  +N+L++G+GK+G++ +A    +RM+  G  PD+ +++ 
Sbjct: 911  LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970

Query: 408  LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
            L+D  C  G+++  L   +++K   L P++  + ++IN L +  R  +A     +++   
Sbjct: 971  LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030

Query: 468  LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
            +VP  + YN +I      G ++EA  I  E++    KP+  T+  LI G+ + G    A 
Sbjct: 1031 IVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAY 1090

Query: 528  SIFNKMLRIGCAPDDITVNSL 548
             I+ KM+  GC P+  T   L
Sbjct: 1091 GIYKKMMVGGCDPNTGTFAQL 1111



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 13/433 (3%)

Query: 150  LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
            ++L  +  TYN+++  L + G       +F+ M   G  PN+      +    +  + D 
Sbjct: 573  MNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDL 632

Query: 210  AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            A  +  +            +N++++  +KQN    A+++F +  +L  +PD  T   L+ 
Sbjct: 633  ALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLL-RPDHVTLCTLLP 691

Query: 270  GLSRIGEVKKAF----EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            G+ + G+++ AF    +FFY +GS   + D   +  ++ G+       +   L  E    
Sbjct: 692  GVIKSGQIEDAFRITEDFFYQVGS---NIDRSFWEDVMGGILTEAGTEKAI-LFGERLVC 747

Query: 326  SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVGNMV 384
                 D      +I   CK  K   A  ++ +     G+KP+   +N+LIDGF +V N+ 
Sbjct: 748  RAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVE 807

Query: 385  SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
             A  + E M S G  PD  T++SLID + ++G++N+   L DEM  +   PN  T+ ++I
Sbjct: 808  VAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVI 867

Query: 445  NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
            + L K NRL+ A      L   D  P P  + P+IDG  K+G +D+A+ +   M    C+
Sbjct: 868  SNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR 927

Query: 505  PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA--- 561
            P+   + IL+ G+   G +  A   F +M++ G  PD  +   L+  L   G  ++A   
Sbjct: 928  PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHY 987

Query: 562  FRIMQRASEDQNL 574
            F  +++A  D +L
Sbjct: 988  FEKLKQAGLDPDL 1000



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 171/337 (50%), Gaps = 2/337 (0%)

Query: 232  LLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            ++  L K      A  +F ++ + L  +P    +N+LI G   +  V+ A+  F +M S 
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 291  GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
            GC+PD  TYN+LI    +  ++    +L  E+  +    P+ +TY  VIS   K  ++DK
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG-CKPNTITYNMVISNLVKSNRLDK 878

Query: 351  ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
            A  +Y  + S    P+  TF  LIDG  K G +  A  M + M+ +G  P+   ++ L++
Sbjct: 879  AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVN 938

Query: 411  GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
            GY + G ++   +    M  + + P++ ++TIL++ LC   R++DA  + ++LK   L P
Sbjct: 939  GYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDP 998

Query: 471  KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
                YN +I+G  ++   +EA  +  EM+ +   PD  T+  LI+   + G + EA  I+
Sbjct: 999  DLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIY 1058

Query: 531  NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             ++  IG  P+  T N+LI      G    A+ I ++
Sbjct: 1059 EELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKK 1095



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 7/291 (2%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYN ++ +  + G  + +  ++D M + G  PN+      +S+ +++ + D A  L    
Sbjct: 827  TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              G+ + +   +  L++ L+K    D+A  MF        +P++  +NIL+ G  ++G V
Sbjct: 887  VSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHV 946

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVT 334
              A EFF  M   G  PD+ +Y  L+  LC   RV++     E LK+    +   PD+V 
Sbjct: 947  DTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ----AGLDPDLVA 1002

Query: 335  YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            Y  +I+G  +  + ++A  +++EM + GI P   T+N LI   G VG +  A  + E + 
Sbjct: 1003 YNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQ 1062

Query: 395  SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
              G  P+V T+++LI GY  +G       +  +M      PN  TF  L N
Sbjct: 1063 FIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 68/147 (46%)

Query: 156  FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             K+Y +++  LC  G  D     F+ ++  G  P+       ++   R+ + + A  L  
Sbjct: 965  LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFH 1024

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            + +   +    + YNSL+  L      +EA  +++E   +  +P+ +T+N LI+G +  G
Sbjct: 1025 EMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSG 1084

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTL 302
              + A+  +  M   GC P+  T+  L
Sbjct: 1085 NSELAYGIYKKMMVGGCDPNTGTFAQL 1111


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 214/456 (46%), Gaps = 16/456 (3%)

Query: 111 DTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG 170
           DT   +LC+     ++L V + +     GLK    + VN+         N ++   C +G
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGA--GLK----ADVNVC--------NTLIHCTCRLG 210

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           +    + +  +M +     ++      V++  RAG+       +   R     +S   YN
Sbjct: 211 MLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYN 270

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            ++   ++     EA  +F+      S PD +T+N+LI  L +  ++++A   F +    
Sbjct: 271 FIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQG 329

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G   D+ TY+ L+    +    A+  E+   ++ K+   PD V Y  +IS   K GK+D+
Sbjct: 330 GVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQ-KAGCMPDTVVYNVLISCLGKQGKVDE 388

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +  +MN  GI P   T+N++ID     G    A      M    + PDVVT+++L++
Sbjct: 389 ALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLN 448

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
           G  +  + ++   L DEM+     P++ TF  LI+ L K  R+ DA     +L      P
Sbjct: 449 GLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAP 508

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
             ++YN +I GFC++G VD+   +  +M E  C PD +T+TIL++G   +G    A+ + 
Sbjct: 509 NSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELL 568

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +M+R G  P   T N LI  L   G   +A+ + +
Sbjct: 569 QEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFK 604



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 179/391 (45%), Gaps = 2/391 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ + C  G    V    +  R DG   ++    F +   IR G+   A  L    
Sbjct: 233 TYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFEST 292

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              E     F YN LL AL K    +EA+ +F+E  +     D +T++ L+    + G  
Sbjct: 293 MTKESVPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRA 351

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E FY+M   GC PD V YN LIS L +  +V    ELL+++  K    PD  TY  
Sbjct: 352 AKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG-IMPDCRTYNI 410

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI      G+ +KA   +  M      P  VT+N L++G  K+     A  + + M +  
Sbjct: 411 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 470

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +PD+ TF +LID   + G++   L+    +     +PN Y +  LI+  C+  +++   
Sbjct: 471 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGY 530

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + +      P    Y  ++ GF + G+   A  ++ EM  +   P   T+ +LI   
Sbjct: 531 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSL 590

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            M G++ +A ++F +M+  G  PD  T ++L
Sbjct: 591 SMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 166/351 (47%), Gaps = 3/351 (0%)

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL-YSQPDTWTFNILIQGLSRIGE 276
           R   V +S       + A  +  + D A+ M  +  R  + QPDT  F   +  L  +  
Sbjct: 45  RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRR 104

Query: 277 VKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           V++A   F DM  +  C+PD+V YNTLI+G C+  +  R  ++ + +K +    P+ V++
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++   CK+ +   A  ++ EM   G+K      N LI    ++G +  A  +   M +
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTA 224

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                D  T+  L++ +CR GQ+++     +  +    + +   +  +I    +  RL +
Sbjct: 225 HACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAE 284

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +  +     + VP  F YN +I   CK+  ++EA  +  E E+     D  T++ L+ 
Sbjct: 285 ATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMD 343

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
                GR  +A+ +F  M + GC PD +  N LISCL K G  +EA  +++
Sbjct: 344 AFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLE 394



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 35/322 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++ +LC+    +    +F      G + +     + + +  +AG+   A  +    
Sbjct: 303 TYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +       T +YN L++ L KQ   DEA+ + ++  R    PD  T+NI+I  LS  G  
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-------------- 323
           +KA+ FF  M     SPD+VTYNTL++GL ++       +L  E++              
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTL 481

Query: 324 --------------------FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                                K   +P+   Y ++ISG+C+ G++DK   ++ +M  C  
Sbjct: 482 IDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSC 541

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P ++T+ +L+ GF + G+   A  + + M+  G+ P + T++ LI      GQ+     
Sbjct: 542 FPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYT 601

Query: 424 LCDEMKGKNLSPNVYTFTILIN 445
           L  EM  K  +P++ T++ L N
Sbjct: 602 LFKEMIAKGFNPDMQTYSALPN 623



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 3/328 (0%)

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           A+  +K   +     D  T   +++ + ++G  +   E   ++   G     VT    I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGI 363
              R  ++     +L +++  +   PD V +T+ +   C++ ++++A  ++++M  +C  
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL-PDVVTFSSLIDGYCRNGQLNQGL 422
            P  V +N LI G+ K G+   A  M  R+   G   P+ V+F +L+   C+  +    L
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            +  EM G  L  +V     LI+  C+   L  ARR L  +  +      F Y  +++  
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C+AG + E    +       C    V +  +I G    GR+ EA  +F   +     PD 
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDV 301

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
            T N LI+ L K     EA  + Q A +
Sbjct: 302 FTYNLLIA-LCKSKQLEEALTLFQEAEQ 328


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 212/430 (49%), Gaps = 1/430 (0%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           +F   S +   +  S  TY +++      G    +  + + M ++G  PN  +   F S+
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSA 387

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             + G  D A  + ++ R   ++     Y +L++AL K    D+A   F +       PD
Sbjct: 388 YAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPD 447

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
              F+ L+ GL  + + +K  E F++M + G  P+IV +NT++  LC+   V  G  L+ 
Sbjct: 448 IVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVD 507

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            ++      PDV++Y ++I G+C  G +D+A+ +   M S G+KP + ++N L+ G+ K 
Sbjct: 508 SIECMG-VRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKA 566

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G + SA     +MLS G  P VVT+++++ G  +  + ++  +L   M       ++YT+
Sbjct: 567 GRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTY 626

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            I++N LCK N +++A +  + L    L      +N +I    K G  ++A  + A +  
Sbjct: 627 NIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPA 686

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
                + VT+ +++     +G + E  S+F+ M + G AP+   +N+L+  LL  G  + 
Sbjct: 687 NGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISR 746

Query: 561 AFRIMQRASE 570
           A   + +  E
Sbjct: 747 AGAYLSKLDE 756



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 195/446 (43%), Gaps = 44/446 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+  L D  + VF  M  +G  PN       +   +  GK      +L + 
Sbjct: 240 TYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS----- 272
             G    +   Y SLLN L K     EA + F        +P   T+ I++ G +     
Sbjct: 300 SAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGAL 359

Query: 273 ------------------------------RIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                         + G + KA + F  M   G SPD V+Y  L
Sbjct: 360 SEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGAL 419

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEF----SPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           I  LC++  V        EVKF        +PD+V ++S++ G C + K +K   ++ EM
Sbjct: 420 IDALCKLGRVDDA-----EVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
            + GI P+ V FN ++    K G ++  + + + +   G  PDV+++++LIDG+C  G +
Sbjct: 475 LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTI 534

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
           ++  KL + M    L P+ +++  L++  CK  R++ A    +++  N + P    YN +
Sbjct: 535 DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           + G  +     EA  +   M     K D  T+ I++ G C    + EAI +F  +   G 
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654

Query: 539 APDDITVNSLISCLLKGGMPNEAFRI 564
             + IT N +I  LLKGG   +A  +
Sbjct: 655 QLNIITFNIMIGALLKGGRKEDAMDL 680



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 191/404 (47%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y+ V+      G  D    +F  M   G  P+       +    +A   D A+ +  Q 
Sbjct: 205 SYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQM 264

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   YN L++  +      E V M +E      +P+  T+  L+  L + G  
Sbjct: 265 IDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRC 324

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A  FF  M   G  P + TY  ++ G      ++  H+LL  +   +  SP+   +  
Sbjct: 325 REARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLN-LMVANGISPNHHIFNI 383

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
             S Y K G +DKA  I+N+M   G+ P AV++  LID   K+G +  AE    +M++ G
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V FSSL+ G C   +  +  +L  EM    + PN+  F  ++  LCKE R+ + +
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ 503

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R +  ++   + P    YN +IDG C AG +DEA+ ++  M     KPD  ++  L+ G+
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGY 563

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C  GR+  A S F KML  G  P  +T N+++  L +    +EA
Sbjct: 564 CKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 161/338 (47%), Gaps = 7/338 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRIGEVKKAFEFFY 285
           Y+ L+    +  + +     F    +   + D    N L+ GL    R+GE         
Sbjct: 97  YSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL--LQ 154

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYC 343
            M   GC PD V+YN L+ GLC         ELL  +     +S  P+VV+Y++VI+G+ 
Sbjct: 155 RMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFF 214

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
             G++DK   ++ EM   GI P  VT+  +IDG  K      AE + ++M+  G  P++ 
Sbjct: 215 TEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNID 274

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T++ LI GY   G+  + +++ +EM      PN  T+  L+N LCK  R  +AR F   +
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSM 334

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    Y  ++ G+   G + E + ++  M      P+   F I    +   G +
Sbjct: 335 IGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGII 394

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +A+ IFNKM + G +PD ++  +LI  L K G  ++A
Sbjct: 395 DKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 169/381 (44%), Gaps = 18/381 (4%)

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN-------ADEAVYMFKEYFR--- 254
           G  DA K L  +  P     S   +N LL A+ + +        ++  V +F    R   
Sbjct: 29  GLGDALK-LFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCY 87

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           +   P+  T++ILI    R+G ++  F  F  +   G   D +  N L++GLC    V  
Sbjct: 88  IKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGE 147

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN-----SCGIKPSAVT 369
             ++L +   +    PD V+Y  ++ G C   + ++A  + + M      SC   P+ V+
Sbjct: 148 AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSC--PPNVVS 205

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           ++ +I+GF   G +     +   M+  G  PDVVT++++IDG C+    ++   +  +M 
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              + PN+ T+  LI+      +  +  R L+++      P    Y  +++  CK G   
Sbjct: 266 DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCR 325

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           EA      M  K  KP   T+ I++ G+  KG + E   + N M+  G +P+    N   
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFF 385

Query: 550 SCLLKGGMPNEAFRIMQRASE 570
           S   K G+ ++A  I  +  +
Sbjct: 386 SAYAKCGIIDKAMDIFNKMRQ 406



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 196/498 (39%), Gaps = 71/498 (14%)

Query: 141  KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
            K LE   V++ L     +YN ++   C+ G  DS    F  M S+G  P        +  
Sbjct: 539  KLLE-GMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHG 597

Query: 201  CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
              +  +   AK L             + YN +LN L K N  DEA+ MF+       Q +
Sbjct: 598  LFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLN 657

Query: 261  TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY--------------------- 299
              TFNI+I  L + G  + A + F  + + G   ++VTY                     
Sbjct: 658  IITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFS 717

Query: 300  --------------NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC-- 343
                          N L+  L    +++R    L ++  +  FS +  T + +IS +   
Sbjct: 718  AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD-ERNFSVEASTTSMLISIFSSD 776

Query: 344  --------------------------KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
                                      K  ++D A  ++ EM   G+ P  VT+N ++ G 
Sbjct: 777  EYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 836

Query: 378  GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             + G    A+ +   M++     ++ T++ +++G C++  +++  K+   +  K L  N+
Sbjct: 837  FQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 896

Query: 438  YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
             TF I+I AL K  R  DA      +  N LVP    Y  V +   + G+++E + +   
Sbjct: 897  ITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLT 956

Query: 498  MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
            ME+     D      L+     +G +  A +  +K+     + +  T + LIS   +G  
Sbjct: 957  MEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEY 1016

Query: 558  PNEA------FRIMQRAS 569
             + A      +R++  A+
Sbjct: 1017 QHHAKSLPEKYRLLNEAN 1034



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 15/184 (8%)

Query: 408 LIDGYCRNGQLNQG--LKLCDEMKGKNLSPNVYTFTILINALCK-----------ENRLN 454
           +I    R+G L  G  LKL DE+       +V  F  L+ A+ +           E  ++
Sbjct: 18  VIADRARSGSLGLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVS 77

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              R ++   +  + P    Y+ +I  FC+ G+++        + +   + D +    L+
Sbjct: 78  LFNRMVRDC-YIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLL 136

Query: 515 IGHCMKGRMVEAISIF-NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
            G C   R+ EA+ +   +M  +GC PD ++ N L+  L       EA  ++   ++DQ 
Sbjct: 137 NGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQV 196

Query: 574 LQLP 577
              P
Sbjct: 197 WSCP 200


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 14/412 (3%)

Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL----LSQ 216
           +++ LC +    D++ +V   M   G +PN      F  + +  G CD  +      L Q
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPN-----VFSYNILLKGLCDENRSQEALELLQ 186

Query: 217 FRP---GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             P   G+       Y +++N   K+ + D+A   + E       P+  T++ +I  L +
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK 246

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              + KA E    M   G  P+  TYN+++ G C   +       LK++       PDVV
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH-SDGVEPDVV 305

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S++   CK G+  +A  +++ M   G+KP   T+  L+ G+   G +V    + + M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  P+   FS LI  Y + G+++Q + +  +M+ + L+P+  T+  +I  LCK  R+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA R+ +Q+    L P   +YN +I   C     D+A  ++ EM ++    D + F  +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I  HC +GR++E+  +F+ M+RIG  PD IT ++LI      G  +EA +++
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 193/395 (48%), Gaps = 3/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN++++ LC+         +   M  DG    P+       ++   + G  D A G   
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  +   Y+S++ AL K    D+A+ +     +    P+  T+N ++ G    G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + K+A  F   M S G  PD+VTYN+L+  LC+        ++   +  K    P++ TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT-KRGLKPEITTY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ GY   G + +  G+ + M   GI P+   F++LI  + K G +  A  +  +M  
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD VT+ ++I   C++G++   ++  ++M  + LSP    +  LI++LC  ++ + 
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+  + ++    +      +N +ID  CK G V E+  +   M     KPD +T++ LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           G+C+ G+M EA  +   M+ +G  PD +T N+LI+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 189/439 (43%), Gaps = 36/439 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ +LC+    D    V   M  +G +PN       V     +G+   A G L + 
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS----- 272
               V      YNSL++ L K     EA  MF    +   +P+  T+  L+QG +     
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 273 ------------------------------RIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                         + G+V +A   F  M   G +PD VTY T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I  LC+   V       +++      SP  + Y S+I   C   K DKA  +  EM   G
Sbjct: 416 IGILCKSGRVEDAMRYFEQM-IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I    + FN +ID   K G ++ +E + + M+  G  PD++T+S+LIDGYC  G++++  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL   M    + P+  T+  LIN  CK +R+ DA    ++++ + + P    YN ++ G 
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            +      A  +   + E   + +  T+ I++ G C      EA+ +F  +       + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 543 ITVNSLISCLLKGGMPNEA 561
            T N +I  LLK G  +EA
Sbjct: 655 RTFNIMIGALLKVGRNDEA 673



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 169/327 (51%), Gaps = 6/327 (1%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF-FYDMGSFGCSPDIVTYNTLISGL 306
           + K+ FR+    D   F  L++GL        A +     M   GC P++ +YN L+ GL
Sbjct: 117 VIKKGFRV----DAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGL 172

Query: 307 CRVNEVARGHELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           C  N      ELL+ +     +  PDVV+YT+VI+G+ K G +DKA G Y+EM   GI P
Sbjct: 173 CDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILP 232

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           + VT++ +I    K   M  A  +   M+  G +P+  T++S++ GYC +GQ  + +   
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
            +M    + P+V T+  L++ LCK  R  +AR+    +    L P+   Y  ++ G+   
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G + E + ++  M      P+   F+ILI  +  +G++ +A+ +F+KM + G  PD +T 
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQ 572
            ++I  L K G   +A R  ++  +++
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDER 439



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 187/405 (46%), Gaps = 1/405 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L     TY  +++     G    +  + D M  +G  PN  +    + +  + GK D A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + S+ R   +   T  Y +++  L K    ++A+  F++       P    +N LI  L
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
               +  KA E   +M   G   D + +N++I   C+   V    +L  ++  +    PD
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPD 513

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           ++TY+++I GYC  GKMD+AT +   M S G+KP  VT+N LI+G+ K+  M  A  +  
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M S G  PD++T++ ++ G  +  +     +L   +        + T+ I+++ LCK N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
             ++A R  + L   DL  +   +N +I    K G  DEA  + A +      PD  T++
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++      +G + E   +F  M   GC  +   +NS++  LL+ G
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 190/407 (46%), Gaps = 2/407 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +++++ +  + G  D   +VF  MR  G  P++      +    ++G+ + A     Q  
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++    +YNSL+++L   +  D+A  +  E        DT  FN +I    + G V 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           ++ + F  M   G  PDI+TY+TLI G C   ++    +LL  +       PD VTY ++
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM-VSVGMKPDCVTYNTL 555

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+GYCK+ +M+ A  ++ EM S G+ P  +T+N+++ G  +     +A+ +   +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             ++ T++ ++ G C+N   ++ L++   +   +L     TF I+I AL K  R ++A+ 
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               L  N LVP    Y+ + +   + G ++E + +   MEE  C  +      ++    
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +G +  A   +  M+       + +  SL   LL GG   E  R +
Sbjct: 736 QRGDITRA-GTYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRFL 781



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
           DE+  +    ++Y     +  + + +      R+  + +   +++ P    Y  +I   C
Sbjct: 43  DELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCC 102

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
            AG +D     +  + +K  + D + FT L+ G C   R  +A+ I   +M ++GC P+ 
Sbjct: 103 CAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
            + N L+  L       EA  ++Q   +D
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDD 191


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 160/287 (55%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+ NTL++G  R+ ++  G  L K V 
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRL-KSVM 203

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A   ++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 263

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A+ + ++MLS   LPD++T+++LI G C+ G L Q   L D+M  K L P+  T+T L
Sbjct: 264 DLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTL 323

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           IB  CKE  L+ A    K++   ++     +Y  +I G C+ G   +A  ++ EM   R 
Sbjct: 324 IBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRL 383

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T++I   C KG + +   +  +M R G AP  +T N L++
Sbjct: 384 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 158/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   + N L+ G  R+G++ + F   
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLK 200

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +E   E+  K    P+ VT+T++I G+CK
Sbjct: 201 SVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKG-LVPNGVTFTTLIDGHCK 259

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++  A  + + M   G  PD +T
Sbjct: 260 NGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKIT 319

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIBG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 320 YTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 379

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 380 SVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 201/431 (46%), Gaps = 28/431 (6%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N +  H+  +Y  ++  LC   +    +                +I+  VS   R G
Sbjct: 9   SPANSTFRHTLHSYCTMIHFLCTHQMFSEAK---------------SLIQVVVS---RKG 50

Query: 206 KCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-- 262
           K  A+    +     G      ++++ L+ A ++     +A+    E +RL  +   W  
Sbjct: 51  KGSASXVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAI----ECYRLTREHKLWVP 106

Query: 263 --TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T   +++ L ++   K  + F+ ++   G    +  +N L+   C+  ++     +  
Sbjct: 107 FDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 166

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  K    P VV+  ++++GY +LG +D+   + + M + G++P   T++VLI+G  K 
Sbjct: 167 AIT-KWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKE 225

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             M  A    + ML  G +P+ VTF++LIDG+C+NG+++   ++  +M  ++L P++ T+
Sbjct: 226 SKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITY 285

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI  LCK+  L  A   +  +    L P    Y  +IBG CK G++D A      M +
Sbjct: 286 NTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQ 345

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  + D V +T LI G C +GR V+A  +  +ML +   PD  T   +I+   K G   +
Sbjct: 346 ENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWK 405

Query: 561 AFRIMQRASED 571
             ++++    D
Sbjct: 406 GSKLLKEMQRD 416



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 165/354 (46%), Gaps = 10/354 (2%)

Query: 101 TLLLRSSYLSDT--CARYLCEK--LSPLNS----LEVIKRLDNPKLGLKFLEFSRVNLSL 152
           T  L S +L D   C R   E     P ++    LE + +L   KL   F E   +    
Sbjct: 80  TAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYE-EILECGY 138

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
             S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    
Sbjct: 139 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFR 198

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L S      V    + Y+ L+N L K++  D+A   F E       P+  TF  LI G  
Sbjct: 199 LKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHC 258

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G V  A E +  M S    PD++TYNTLI GLC+  ++ + H+L+ ++  K    PD 
Sbjct: 259 KNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKG-LKPDK 317

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TYT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   
Sbjct: 318 ITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLRE 377

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           MLS    PD  T++ +I+ +C+ G + +G KL  EM+    +P+V T+ +L+N 
Sbjct: 378 MLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 8/285 (2%)

Query: 295 DIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           DI  ++ LI+       + +    + L +E K    F     T   V+    KL      
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD----TCRKVLEYLMKLKYFKLV 126

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
            G Y E+  CG   S   FN+L+  F K G++  A+ + + +  +G  P VV+ ++L++G
Sbjct: 127 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNG 186

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y R G L++G +L   M    + P+VYT+++LIN LCKE++++DA     ++    LVP 
Sbjct: 187 YIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPN 246

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +  +IDG CK G VD A  I  +M  +   PD +T+  LI G C KG + +A  + +
Sbjct: 247 GVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 306

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
            M   G  PD IT  +LI    K G  + AF   +R  + +N++L
Sbjct: 307 DMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQ-ENIRL 350


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 206/434 (47%), Gaps = 33/434 (7%)

Query: 152 LNHSFKTYNLVMRS---------------LCE-MGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           L HSF T+ L++++               LC+   + +++ V+   M   G  P++    
Sbjct: 114 LKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYS 173

Query: 196 FFVSSCIRAGKCDAAKGLLSQFR--------PGEVTMSTFMYNSLLNALVKQNNADEAVY 247
             +       + + A  LL            P  VT     Y ++++ L K    D A  
Sbjct: 174 ILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVT-----YTTVIDGLCKAQLFDRAEG 228

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +F++      +P+  T+N LI G   IG+ K+  +    M + G  PD  TY +L++ LC
Sbjct: 229 VFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC 288

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
            ++E+   H  L ++  ++  SPD   +    S Y K G +DKA  I+N+M   G+ P+ 
Sbjct: 289 ALSEM---HSFL-DLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNV 344

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           V +  LID   K+G +  AE    +M++ G  P++V F+SL+ G C   +  +  +L  E
Sbjct: 345 VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYE 404

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  + + PN   F  LI  LC   R+ + RR +  ++   + P  F Y P+I G+C AG 
Sbjct: 405 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGR 464

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
            DEA  +   M      P +VT+  L+ G+C   R+ +A  +F +MLR G  P  +T N+
Sbjct: 465 TDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNT 524

Query: 548 LISCLLKGGMPNEA 561
           ++  L +    +EA
Sbjct: 525 ILHGLFQTKRFSEA 538



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 199/413 (48%), Gaps = 4/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC +     +    D M  +G  P+  +   F S+  + G  D A  + ++ 
Sbjct: 279 TYGSLLNYLCALS---EMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 335

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   ++ +   Y +L++AL K    D+A   F +       P+   FN L+ GL  + + 
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E  Y+M   G  P+ V +NTLI  LC V  V  G  L+  ++      PD  +YT 
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG-VRPDAFSYTP 454

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGYC  G+ D+A  +++ M S G+ P+ VT+N L+ G+     +  A  +   ML  G
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P VVT+++++ G  +  + ++  +L   M       ++YT+ I++N LCK N +++A 
Sbjct: 515 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 574

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  + L    L      +  +I    K G  ++A  + A +      P+ VT+ ++    
Sbjct: 575 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 634

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +G + E  S+F+ M + G AP+   +N+L+  LL  G  + A   + +  E
Sbjct: 635 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 687



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 183/411 (44%), Gaps = 12/411 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+  L D  + VF  M  +G  PN+      +   +  GK      +L + 
Sbjct: 209 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKM 268

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + Y SLLN L   +     + +  E       PD   FNI     ++ G +
Sbjct: 269 SARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGL---SPDHHIFNIFFSAYAKCGMI 325

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF----SPDVV 333
            KA + F  M   G SP++V Y  LI  LC++  V        EVKF        +P++V
Sbjct: 326 DKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA-----EVKFNQMINEGVTPNIV 380

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            + S++ G C + K ++A  +  EM   GI P+AV FN LI     VG ++    + + M
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 440

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  PD  +++ LI GYC  G+ ++  K+ D M    LSP   T+  L++  C  +R+
Sbjct: 441 EHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 500

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +DA    +++    + P    YN ++ G  +     EA  +   M     K D  T+ I+
Sbjct: 501 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 560

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           + G C    + EA  +F  +   G   + IT   +I  LLKGG   +A  +
Sbjct: 561 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 611



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 174/417 (41%), Gaps = 108/417 (25%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVA-- 313
           P+T T++ILI  L R+G +K +F  F  +   G   + +  N L+ GLC   RV E    
Sbjct: 96  PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155

Query: 314 ----------------------------RGHELLKEVKFKS-----EFSPDVVTYTSVIS 340
                                       R  E L+ ++  +        P+VVTYT+VI 
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G CK    D+A G++ +M   G+KP+  T+N LI G+  +G       M E+M + G  P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 401 DVVTFSSLID--------------------------------GYCRNGQLNQGLKLCDEM 428
           D  T+ SL++                                 Y + G +++ + + ++M
Sbjct: 276 DCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 335

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQL-----------------------KW 465
           +   LSPNV  +  LI+ALCK  R++DA     Q+                       KW
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395

Query: 466 ------------NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
                         + P    +N +I   C  G V E   ++  ME    +PD  ++T L
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 455

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQR 567
           I G+C+ GR  EA  +F+ M+ IG +P ++T N+L+         ++A   FR M R
Sbjct: 456 ISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLR 512



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 151/324 (46%), Gaps = 17/324 (5%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK----GLL 214
           +N ++ +LC +G     + + D M   G  P++      +S    AG+ D A+    G++
Sbjct: 417 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV 476

Query: 215 S-QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           S    P EVT     YN+LL+     +  D+A  +F+E  R    P   T+N ++ GL +
Sbjct: 477 SIGLSPTEVT-----YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 531

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
                +A E + +M + G   DI TYN +++GLC+ N V    ++ + +  K     +++
Sbjct: 532 TKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG-LQLNII 590

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T+T +I    K G+ + A  ++  + + G+ P+ VT+ ++ +   + G++   + +   M
Sbjct: 591 TFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAM 650

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G  P+    ++L+      G +++      ++  +N S    T ++LI+    +   
Sbjct: 651 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQ 710

Query: 454 NDAR------RFLKQLKWNDLVPK 471
           + A+       FL +   + L+ K
Sbjct: 711 HHAKSLPEKYHFLNEANSSALIKK 734



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 4/182 (2%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           R  S    P+  T+S LI   CR G+L         +       N      L+  LC   
Sbjct: 88  RECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGK 147

Query: 452 RLNDARR-FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE---KRCKPDK 507
           R+ +A    L+++      P    Y+ ++ GFC     +EA  ++  M     + C P+ 
Sbjct: 148 RVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNV 207

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           VT+T +I G C       A  +F +M+  G  P++ T N LI   L  G   E  +++++
Sbjct: 208 VTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEK 267

Query: 568 AS 569
            S
Sbjct: 268 MS 269



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/164 (18%), Positives = 68/164 (41%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K L  + +N        TYN+++  LC+    D    +F  + S G   N       + +
Sbjct: 539 KELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 598

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            ++ G+ + A  L +      +  +   Y  +   L+++ + +E   +F    +  + P+
Sbjct: 599 LLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN 658

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           +   N L++ L   G++ +A  +   +     S +  T + LIS
Sbjct: 659 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLIS 702


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 1/294 (0%)

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            +T+  L+ GL   G V++A   F  M + GC+PD   Y T++ GLC          LL 
Sbjct: 142 AFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLS 201

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           +   +  F P+VV Y ++I GYC +G ++ A  ++  M+  G  P+  T+  LI GF K 
Sbjct: 202 DAMAEG-FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKS 260

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             +  A  +  RM+  G +P+VVT+++LI G C +GQL+   +L   M+   L PN +T 
Sbjct: 261 RKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTC 320

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           ++LI+ALCK  R+ +A+  L  L    +     +Y  +IDG CKAG    A+ ++  +  
Sbjct: 321 SVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +   PD  T++ LI G C +  + EA+ + + M+  G  P  +T   +I  L++
Sbjct: 381 QGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVR 434



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 210/434 (48%), Gaps = 14/434 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LC  G+      VF  M++DG  P+  +    V     AG+   A+ LLS  
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +  +YN+L++      + + AV +F+        P+  T+  LI G  +  ++
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  P++VTY  LI G C   ++   + LL+ ++  S   P+  T + 
Sbjct: 264 DRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME-NSGLVPNEWTCSV 322

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CK  ++ +A  +   +   GIK + + +  LIDG  K G   +A+ + + ++S G
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           ++PD  T+SSLIDG CR  +L++ + + D+M  K + P+  T+TI+I+ L +E   + ++
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSK 442

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L ++    + P  F Y   +  +C  G +++A  ++  M +    P+ VT+  LI G+
Sbjct: 443 KILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGY 502

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK----GGMPNEAFRIMQRA----- 568
              G   +A S F  M+  GC P++ +   L+  L+K      +P  +  I + A     
Sbjct: 503 ANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYL 562

Query: 569 ----SEDQNLQLPS 578
                E   LQLPS
Sbjct: 563 HGLLEEMVKLQLPS 576



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 165/342 (48%), Gaps = 1/342 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y +L+NA     +   +        R    PD+  +   + G  R G +  A   F  M 
Sbjct: 75  YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMP 134

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             GC     TY  L+ GLC    V     +   ++     +PD   Y +++ G C  G+ 
Sbjct: 135 LRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADG-CAPDPHVYATMVHGLCGAGRT 193

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  + ++  + G +P+ V +N LIDG+  VG++  A  + ERM   G  P+V T++ L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G+C++ +L++ + L   M    L PNV T+T LI   C + +L+ A R L+ ++ + L
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           VP  +  + +ID  CK   V EA +++  + +K  K +++ +T LI G C  GR   A  
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +   ++  G  PD  T +SLI  L +    +EA  ++    E
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMME 415



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 190/441 (43%), Gaps = 18/441 (4%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TY  ++   C+    D   ++F  M   G +PN       +      G+ D A  LL  
Sbjct: 248 RTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQS 307

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  + +  + L++AL K     EA  +     +   + +   +  LI GL + G 
Sbjct: 308 MENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGR 367

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A      + S G  PD  TY++LI GLCR  E++    +L ++  K    P  VTYT
Sbjct: 368 FAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG-VQPSPVTYT 426

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I    +    D +  I ++M + GIKP   T+ + +  +   G M  AE+M   M+  
Sbjct: 427 IIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDH 486

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P++VT+++LI GY   G  +Q       M      PN  ++T+L+  L K+   N+ 
Sbjct: 487 GVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNI 546

Query: 457 ----------------RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
                              L+++    L  +  +YN  +   C+   +DEA +++ EM+ 
Sbjct: 547 PANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQS 606

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
               P +  +T +I   C    + EA++  + M++ G  P   +   +IS L + G    
Sbjct: 607 ANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQT 666

Query: 561 AFRIM-QRASEDQNLQLPSWK 580
           A ++     S++ N +  +W+
Sbjct: 667 AKQVFGDMLSKEYNYEEIAWR 687



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 186/459 (40%), Gaps = 55/459 (11%)

Query: 137 KLGLKFLEFSR-VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL    + FSR V+  L  +  TY  +++  C  G  D    +   M + G +PN     
Sbjct: 262 KLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCS 321

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + +  +  +   A+ LL       + ++  +Y SL++ L K      A  + +     
Sbjct: 322 VLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ 381

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV-AR 314
              PD  T++ LI GL R  E+ +A     DM   G  P  VTY  +I  L R  EV A 
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVR--EVGAD 439

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
           G + + +    +   PDV TYT  +  YC  G+M+ A  +   M   G+ P+ VT+N LI
Sbjct: 440 GSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI 499

Query: 375 DGFGKVG------------------------------------------NMVSAEYMRER 392
            G+  +G                                          N VS   + E 
Sbjct: 500 CGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEM 559

Query: 393 MLSFGYLPDVVTFS--SLIDGY-------CRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
               G L ++V     S ID Y       CR  +L++   L  EM+  NL+P+   +T +
Sbjct: 560 KYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSI 619

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I   C+   L +A  F+  +  +  +P+   Y  +I   C+ G++  A  +  +M  K  
Sbjct: 620 IACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEY 679

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
             +++ + ILI G   KG + E  S+ + M      P D
Sbjct: 680 NYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSD 718



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 129/270 (47%), Gaps = 3/270 (1%)

Query: 316 HELLKEVKFKSEFSP--DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
           H +L +++  +   P  ++ TYT++I+ YC  G +  +    + +   G  P +  +   
Sbjct: 54  HRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSF 113

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           + G+ + G +  A  +   M   G +    T+++L+ G C  G + + + +   M+    
Sbjct: 114 VVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGC 173

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P+ + +  +++ LC   R  +A   L         P   +YN +IDG+C  G+++ A  
Sbjct: 174 APDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVD 233

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +   M+   C P+  T+T LI G C   ++  A+ +F++M+  G  P+ +T  +LI    
Sbjct: 234 VFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQC 293

Query: 554 KGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
             G  + A+R++Q + E+  L    W  +V
Sbjct: 294 SDGQLDCAYRLLQ-SMENSGLVPNEWTCSV 322



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/381 (21%), Positives = 153/381 (40%), Gaps = 35/381 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y  ++  LC+ G   +   +   + S G +P++      +    R  +   A  +L   
Sbjct: 354 VYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM 413

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  S   Y  +++ LV++  AD +  +  +      +PD +T+ I ++     G +
Sbjct: 414 MEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRM 473

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGL--------------------CRVNEVARGHE 317
           + A      M   G  P++VTYN LI G                     C+ NE    + 
Sbjct: 474 EDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE--ESYT 531

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +L  +  K E S ++   +  I    K+ +M    G+  EM    +      +N  +   
Sbjct: 532 VLLRLLIKKESSNNIPANSVSIW---KIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSL 588

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            +V  +  A+ +   M S    P    ++S+I   CR   L + L   D M      P +
Sbjct: 589 CRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQL 648

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV-----IDGFCKAGNVDEAN 492
            ++  +I++LC+E  +  A++      + D++ K + Y  +     IDG  + G V E +
Sbjct: 649 ESYRHIISSLCEEGSIQTAKQV-----FGDMLSKEYNYEEIAWRILIDGLLQKGYVAECS 703

Query: 493 VIVAEMEEKRCKPDKVTFTIL 513
            +++ MEEK  +P    +  L
Sbjct: 704 SLLSVMEEKNYRPSDALYARL 724



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/349 (19%), Positives = 142/349 (40%), Gaps = 17/349 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++  LC         +V D M   G  P+       +   +R    D +K +L + 
Sbjct: 389 TYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKM 448

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F Y   + +   +   ++A +M          P+  T+N LI G + +G  
Sbjct: 449 IAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLT 508

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR----------------VNEVARGHELLKE 321
            +AF  F  M + GC P+  +Y  L+  L +                + E+   H LL+E
Sbjct: 509 SQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEE 568

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K +   ++  Y   ++  C++ ++D+A  +  EM S  + PS   +  +I    ++ 
Sbjct: 569 M-VKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLK 627

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A    + M+  GY+P + ++  +I   C  G +    ++  +M  K  +     + 
Sbjct: 628 MLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWR 687

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           ILI+ L ++  + +    L  ++  +  P   +Y  +      A ++ E
Sbjct: 688 ILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 189/362 (52%), Gaps = 3/362 (0%)

Query: 205 GKCDAAKGLL-SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           G+ +  + L+ +++  G V  + F YN L++   ++ +    + +  E       P   T
Sbjct: 290 GRVEEGRRLIEARWGEGCVPGAVF-YNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVT 348

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  +I  L R  ++ K     ++M   G SP++  YNT+I  LC+    ++   +L ++ 
Sbjct: 349 YGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQM- 407

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S F PDVVT+ ++I+ +C+ G +++A  +  E     ++P+ +++  LI GF   G +
Sbjct: 408 VASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEV 467

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           + A  +   M+  G+ PDVVT  +LI G   +GQ+++ L + ++M  + + P+   + +L
Sbjct: 468 MVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVL 527

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+ LCK+  L+ A+  L ++    + P  F+Y  +IDGF ++  + +A  I   MEEK  
Sbjct: 528 ISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGG 587

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             D V +  +I G+C  G M EA+   + M ++GC PD+ T  +LI    K G    A R
Sbjct: 588 YRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALR 647

Query: 564 IM 565
            +
Sbjct: 648 FL 649



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 186/395 (47%), Gaps = 1/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  L        ++ +   M+  G  PN  +    + +  +      A  +L+Q 
Sbjct: 348 TYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQM 407

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +N+L+ A  ++ + +EA+ + +E  R   +P+  ++  LI G    GEV
Sbjct: 408 VASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEV 467

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +   +M   G +PD+VT   LI GL    +V     +++E   + +  PD   Y  
Sbjct: 468 MVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEA-LMVREKMAERQVMPDANIYNV 526

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG CK   +  A  +  EM    ++P    +  LIDGF +   +  A  + E M   G
Sbjct: 527 LISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKG 586

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+V ++++I GYC++G +N+ +     M+     P+ +T+T LI+   K+  +  A 
Sbjct: 587 GYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAAL 646

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           RFL  +      P    Y  +I G+C  GN D A V+ A M+ +   P+ V +T+LI   
Sbjct: 647 RFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSL 706

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
             K + ++A + F  ML   C+P+D T++ L++ L
Sbjct: 707 FKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGL 741



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 193/394 (48%), Gaps = 11/394 (2%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           +++R LC  G  +  + + +    +G +P +      +    R G  D  +GLL     G
Sbjct: 281 VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRG--DVGRGLLLL---G 335

Query: 221 EVTMSTFM-----YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           E+ M   M     Y ++++ L ++++  +   +  E       P+   +N +I  L +  
Sbjct: 336 EMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCR 395

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
              +A      M +    PD+VT+NTLI+  CR  +V    +LL+E   + E  P+ ++Y
Sbjct: 396 SASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREA-IRRELEPNQLSY 454

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T +I G+C  G++  A+ +  EM   G  P  VT   LI G    G +  A  +RE+M  
Sbjct: 455 TPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAE 514

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
              +PD   ++ LI G C+   L+    L  EM  + + P+ + +T LI+   + ++L+D
Sbjct: 515 RQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSD 574

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           AR+  + ++          YN +I G+CK+G ++EA + ++ M +  C PD+ T+T LI 
Sbjct: 575 ARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           G+  KG +  A+     M++  C P+ +T  SLI
Sbjct: 635 GYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLI 668



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 1/396 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C  G      ++   M   G +P        +    R       + LL + +
Sbjct: 314 YNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMK 373

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++ +  +YN+++ AL K  +A +A+ +  +       PD  TFN LI    R G+V+
Sbjct: 374 ERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVE 433

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A +   +       P+ ++Y  LI G C   EV    +LL E+  +   +PDVVT  ++
Sbjct: 434 EALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGH-TPDVVTLGAL 492

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G    G++D+A  +  +M    + P A  +NVLI G  K   + +A+ +   ML    
Sbjct: 493 IHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKV 552

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD   +++LIDG+ R+ +L+   K+ + M+ K    ++  +  +I   CK   +N+A  
Sbjct: 553 QPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVM 612

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            +  ++    +P  F Y  +IDG+ K G++  A   + +M ++RCKP+ VT+  LI G+C
Sbjct: 613 CMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYC 672

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             G    A  +F  M   G  P+ +    LI  L K
Sbjct: 673 NIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFK 708



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 147/307 (47%), Gaps = 1/307 (0%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D ++  ++++GL   G V++           GC P  V YN LI G CR  +V RG  LL
Sbjct: 275 DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLL 334

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E++ K    P VVTY ++I    +   + K   +  EM   G+ P+   +N +I    K
Sbjct: 335 GEMEMKG-IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCK 393

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
             +   A  +  +M++  + PDVVTF++LI  +CR G + + LKL  E   + L PN  +
Sbjct: 394 CRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLS 453

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +T LI+  C    +  A   L ++      P       +I G   +G VDEA ++  +M 
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMA 513

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E++  PD   + +LI G C K  +  A ++  +ML     PD     +LI   ++    +
Sbjct: 514 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLS 573

Query: 560 EAFRIMQ 566
           +A +I +
Sbjct: 574 DARKIFE 580



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 199/430 (46%), Gaps = 32/430 (7%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSD---GHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           T+N ++ + C  G + ++++++ + +R +     L  +P+I  F   C+R G+   A  L
Sbjct: 418 TFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF---CVR-GEVMVASDL 473

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L +      T       +L++ LV     DEA+ + ++       PD   +N+LI GL +
Sbjct: 474 LVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCK 533

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              +  A     +M      PD   Y TLI G  R ++++   ++ + ++ K  +  D+V
Sbjct: 534 KRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYR-DIV 592

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y ++I GYCK G M++A    + M   G  P   T+  LIDG+ K G++ +A      M
Sbjct: 593 AYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDM 652

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +     P++VT++SLI GYC  G  +    L   M+ + L PNV  +T+LI +L K+++ 
Sbjct: 653 MKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKA 712

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGF--CKAG-------NVDEANVIVAEME----- 499
             A  + + +  N   P     + +++G   C+ G       + D+A+   A ++     
Sbjct: 713 IQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGL 772

Query: 500 -EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI--------S 550
                 P    +  +I   C    + +A+ +  KM   GC PD +T  SL+        S
Sbjct: 773 ISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKS 832

Query: 551 CLLKGGMPNE 560
              +  +PNE
Sbjct: 833 GKWRSALPNE 842



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 17/187 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG----- 212
           TY  ++   C +G  DS +V+F  M+S+G  PN       + S  +  K   A       
Sbjct: 663 TYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHM 722

Query: 213 LLSQFRPGEVTMSTFMYNSLLN---ALVKQN--NADEA------VYMFKEYFRLYSQPDT 261
           LL+   P + TM  ++ N L N    ++  N  + D+A      + +FK        P  
Sbjct: 723 LLNHCSPNDATMH-YLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRI 781

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             +N +I  L R   + KA E    M + GC PD VT+ +L+ G   V +  +    L  
Sbjct: 782 SAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPN 841

Query: 322 VKFKSEF 328
              + EF
Sbjct: 842 EFQQDEF 848


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 14/412 (3%)

Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL----LSQ 216
           +++ LC +    D++ +V   M   G +PN      F  + +  G CD  +      L Q
Sbjct: 132 MLKGLCADKRTSDAMDIVLRRMTQLGCIPN-----VFSYNILLKGLCDDNRSQEALELLQ 186

Query: 217 FRP---GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             P   G+       Y +++N   K+ + D+A   + E       P+  T++ +I  L +
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK 246

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              + KA E    M   G  P+  TYN+++ G C   +       LK++       PDVV
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH-SDGVEPDVV 305

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY S++   CK G+  +A  +++ M   G+KP   T+  L+ G+   G +V    + + M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  P+   FS LI  Y + G+++Q + +  +M+ + L+P+  T+  +I  LCK  R+
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            DA R+ +Q+    L P   +YN +I   C     D+A  ++ EM ++    D + F  +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           I  HC +GR++E+  +F+ M+RIG  PD IT ++LI      G  +EA +++
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 193/395 (48%), Gaps = 3/395 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN++++ LC+         +   M  DG    P+       ++   + G  D A G   
Sbjct: 164 SYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +  +   Y+S++ AL K    D+A+ +     +    P+  T+N ++ G    G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + K+A  F   M S G  PD+VTYN+L+  LC+        ++   +  K    P++ TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT-KRGLKPEITTY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ GY   G + +  G+ + M   GI P+   F++LI  + K G +  A  +  +M  
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD VT+ ++I   C++G++   ++  ++M  + LSP    +  LI++LC  ++ + 
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+  + ++    +      +N +ID  CK G V E+  +   M     KPD +T++ LI 
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           G+C+ G+M EA  +   M+ +G  PD +T N+LI+
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 189/439 (43%), Gaps = 36/439 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++ +LC+    D    V   M  +G +PN       V     +G+   A G L + 
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS----- 272
               V      YNSL++ L K     EA  MF    +   +P+  T+  L+QG +     
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 273 ------------------------------RIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                         + G+V +A   F  M   G +PD VTY T+
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I  LC+   V       +++      SP  + Y S+I   C   K DKA  +  EM   G
Sbjct: 416 IGILCKSGRVEDAMRYFEQM-IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I    + FN +ID   K G ++ +E + + M+  G  PD++T+S+LIDGYC  G++++  
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           KL   M    + P+  T+  LIN  CK +R+ DA    ++++ + + P    YN ++ G 
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            +      A  +   + E   + +  T+ I++ G C      EA+ +F  +       + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 543 ITVNSLISCLLKGGMPNEA 561
            T N +I  LLK G  +EA
Sbjct: 655 RTFNIMIGALLKVGRNDEA 673



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 163/315 (51%), Gaps = 2/315 (0%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEF-FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           D   F  +++GL        A +     M   GC P++ +YN L+ GLC  N      EL
Sbjct: 125 DAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALEL 184

Query: 319 LKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L+ +     +  PDVV+YT+VI+G+ K G +DKA G Y+EM   GI P+ VT++ +I   
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K   M  A  +   M+  G +P+  T++S++ GYC +GQ  + +    +M    + P+V
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDV 304

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  L++ LCK  R  +AR+    +    L P+   Y  ++ G+   G + E + ++  
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M      P+   F+ILI  +  +G++ +A+ +F+KM + G  PD +T  ++I  L K G 
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424

Query: 558 PNEAFRIMQRASEDQ 572
             +A R  ++  +++
Sbjct: 425 VEDAMRYFEQMIDER 439



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 187/405 (46%), Gaps = 1/405 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L     TY  +++     G    +  + D M  +G  PN  +    + +  + GK D A 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + S+ R   +   T  Y +++  L K    ++A+  F++       P    +N LI  L
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
               +  KA E   +M   G   D + +N++I   C+   V    +L  ++  +    PD
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPD 513

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           ++TY+++I GYC  GKMD+AT +   M S G+KP  VT+N LI+G+ K+  M  A  +  
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M S G  PD++T++ ++ G  +  +     +L   +        + T+ I+++ LCK N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
             ++A R  + L   DL  +   +N +I    K G  DEA  + A +      PD  T++
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++      +G + E   +F  M   GC  +   +NS++  LL+ G
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 190/407 (46%), Gaps = 2/407 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +++++ +  + G  D   +VF  MR  G  P++      +    ++G+ + A     Q  
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++    +YNSL+++L   +  D+A  +  E        DT  FN +I    + G V 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           ++ + F  M   G  PDI+TY+TLI G C   ++    +LL  +       PD VTY ++
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM-VSVGMKPDCVTYNTL 555

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+GYCK+ +M+ A  ++ EM S G+ P  +T+N+++ G  +     +A+ +   +   G 
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             ++ T++ ++ G C+N   ++ L++   +   +L     TF I+I AL K  R ++A+ 
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               L  N LVP    Y+ + +   + G ++E + +   MEE  C  +      ++    
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +G +  A   +  M+       + +  SL   LL GG   E  R +
Sbjct: 736 QRGDITRA-GTYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRFL 781



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 26/237 (10%)

Query: 351 ATGIYNEMNSCG---IKPSAVTFNVLID----------GFGKVGNMVSAEYMRERMLSFG 397
           A   YN M   G   + P+  T+ +L+           GF  +GN++            G
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKK----------G 121

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLC-DEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           ++ D + F+ ++ G C + + +  + +    M      PNV+++ IL+  LC +NR  +A
Sbjct: 122 FIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEA 181

Query: 457 RRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              L+ +     D  P    Y  VI+GF K G++D+A     EM ++   P+ VT++ +I
Sbjct: 182 LELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSII 241

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
              C    M +A+ +   M++ G  P+  T NS++      G P EA   +++   D
Sbjct: 242 AALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 3/149 (2%)

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
           DE+  +    ++Y     +  + + +      R+  + +   +++ P    Y  ++   C
Sbjct: 43  DELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCC 102

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
            AG +D     +  + +K    D + FT ++ G C   R  +A+ I   +M ++GC P+ 
Sbjct: 103 CAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNV 162

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASED 571
            + N L+  L       EA  ++Q   +D
Sbjct: 163 FSYNILLKGLCDDNRSQEALELLQMMPDD 191


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 176/356 (49%), Gaps = 50/356 (14%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+  ++N++I GL + GEV KA+  F++M   G  P+IVTYN++I GLC+   + +   +
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 319 LKEVKFKSEF---------------SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           L+++  K +                 PDVVTY+ +I  YCK+G+  +A  I++ M   G 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P A T+  L+ G+   G +V    +   M+  G   +   F+ LI  Y +N  L++ + 
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL-------------------- 463
              EM+ K  SPNV T+T +I+ LCK  R+ DA     Q+                    
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 464 ---KWND------------LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
              +W              + P     N ++D  CK G V EA+    ++     KPD V
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           ++TILI G+C+ G+M E+I +  +M+ IG  PD++T ++L++   K G  ++A  +
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 199/430 (46%), Gaps = 37/430 (8%)

Query: 158 TYNLVMRSLCEMGLHD--------SVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKC 207
           T+ +++R  C +GL D          +     M  DG+   PN       ++   + G+ 
Sbjct: 96  TFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEV 155

Query: 208 DAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF--------- 253
           D A  L  +     F P  VT     YNS+++ L K    D+A  + ++ F         
Sbjct: 156 DKAYTLFHEMLGQGFPPNIVT-----YNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAV 210

Query: 254 RLYS-------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           RL         QPD  T+++LI    +IG   +A   F  M   G +PD  TY TL+ G 
Sbjct: 211 RLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGY 270

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
                +   H+LL  +  +     +   +  +I  Y K   +DKA   + EM   G  P+
Sbjct: 271 ATKGALVDMHDLLA-LMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPN 329

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT+  +ID   K G +  A     +M+S G  PD++TF+SLI G C  G+  +  KL  
Sbjct: 330 VVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSF 389

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           EM  + + PN      ++++LCKE R+ +A  F  Q+    + P    Y  +IDG+C  G
Sbjct: 390 EMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDG 449

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            +DE+  ++  M     +PD VT++ L+ G+C  GR+ +A++++ +M      P+ IT N
Sbjct: 450 KMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYN 509

Query: 547 SLISCLLKGG 556
            ++  L   G
Sbjct: 510 IILHGLFHAG 519



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 201/450 (44%), Gaps = 36/450 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+L++   C++G     + +FD M   G  P++      +      G       LL+  
Sbjct: 227 TYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALM 286

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +   ++N L+ A  K    D+A+  F E  +    P+  T+  +I  L + G V
Sbjct: 287 IQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRV 346

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE-------------------------- 311
           + A   F  M S G SPDI+T+ +LI GLC + E                          
Sbjct: 347 EDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTI 406

Query: 312 ---------VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                    V   H+   ++       PDVV+YT +I GYC  GKMD++  +   M S G
Sbjct: 407 MDSLCKEGRVLEAHDFFDQI-IHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIG 465

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           ++P  VT++ L++G+ K G +  A  +   M S    P+ +T++ ++ G    G++    
Sbjct: 466 LRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAR 525

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +   ++    +   + T+ I++  LC+ + +++A R  + L+  +   +   +N +I G 
Sbjct: 526 EFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGL 585

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G + +A  + + +      PD + + ++I  H  +G + E+  +F  M + GC  + 
Sbjct: 586 LKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANS 645

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            T+N+++  LL+ G    A   + +  E +
Sbjct: 646 RTLNAIVRKLLEKGDVRRAGTYLTKIDEKE 675



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/392 (21%), Positives = 162/392 (41%), Gaps = 38/392 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F+E  +   S N    TY  V+  LC+ G  +     F  M S+G  P+       +   
Sbjct: 318 FIEMRQKGFSPN--VVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G+    + L  +     +  +    N+++++L K+    EA   F +   +  +PD 
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDV 435

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            ++ ILI G    G++ ++ +    M S G  PD VTY+ L++G C+   V     L +E
Sbjct: 436 VSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYRE 495

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F  +  P+ +TY  ++ G    G++  A   Y ++   GI+    T+N+++ G     
Sbjct: 496 M-FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGL---- 550

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
                                          C N  +++ L++   ++ K     V TF 
Sbjct: 551 -------------------------------CENSFVDEALRMFQGLRSKEFQLEVRTFN 579

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           I+I  L K  R+ DA+     +  + LVP   +Y  +I    + G ++E++ +   ME+ 
Sbjct: 580 IMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKN 639

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            C  +  T   ++     KG +  A +   K+
Sbjct: 640 GCTANSRTLNAIVRKLLEKGDVRRAGTYLTKI 671



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 148/328 (45%), Gaps = 18/328 (5%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           L F  +N  ++ +    N +M SLC+ G        FD +   G  P+       +    
Sbjct: 387 LSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYC 446

Query: 203 RAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
             GK D +  LL +      RP  VT     Y++LLN   K    D+A+ +++E F    
Sbjct: 447 LDGKMDESIKLLGRMVSIGLRPDNVT-----YSALLNGYCKNGRVDDALALYREMFSKDV 501

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P+  T+NI++ GL   G V  A EF+  +   G    I TYN ++ GLC  + V     
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           + + ++ K EF  +V T+  +I G  K+G++  A  +++ +   G+ P A+ + ++I   
Sbjct: 562 MFQGLRSK-EFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSH 620

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G +  ++ +   M   G   +  T ++++      G + +      ++  K  S   
Sbjct: 621 IEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEA 680

Query: 438 YTFTILINALCKENRLNDARRFLKQLKW 465
            T  +LI+ + +       R++ K++K+
Sbjct: 681 STAVLLISIVSE-------RKYQKEVKF 701



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 48/214 (22%)

Query: 401 DVVTFSSLIDGYCRNGQLNQGLK------------LCDEMKGKNLSPNVYTFTILINALC 448
           D  TF  LI  +C  G L+  L+            + D+  G N  PNV ++ ++IN L 
Sbjct: 93  DACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADD--GYNCPPNVLSYNMVINGLF 150

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK------- 501
           KE  ++ A     ++      P    YN VIDG CKA  +D+A  ++ +M +K       
Sbjct: 151 KEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAV 210

Query: 502 ---------RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT-------- 544
                      +PD VT+++LI  +C  GR  EA +IF+ M+R G  PD  T        
Sbjct: 211 RLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGY 270

Query: 545 --------VNSLISCLLKGGMP--NEAFRIMQRA 568
                   ++ L++ +++ G+P  +  F I+ RA
Sbjct: 271 ATKGALVDMHDLLALMIQDGIPLEDHVFNILIRA 304


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 207/419 (49%), Gaps = 2/419 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           + L  +   Y+ VM   C MG  +  + + + ++  G  PN       V    + G+ + 
Sbjct: 247 MGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEE 306

Query: 210 AKGLLSQFR-PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           A+ ++ + +  G++ +    Y  ++N   ++   D+A  +  E        + + +N +I
Sbjct: 307 AERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMI 366

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL ++G +++  +   +M   G  PD  +YNTLI G CR   + +  E+ + +  ++  
Sbjct: 367 NGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCR-MMVRNGL 425

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +   +TY +++ G+C L  +D A  ++  M   G+ P+ ++ + L+DG  K G    A  
Sbjct: 426 AATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + +  L+ G   +V+TF+++I+G C+ G++ +  +L D MK     P+  T+  L +  C
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYC 545

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  +L  A   + +++     P   M+N  I G   A    + N I +EM  +   P+ V
Sbjct: 546 KLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLV 605

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T+  LI G C +G + EA +++ +M+  G  P+    ++L+SC  K G  +EA  ++Q+
Sbjct: 606 TYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 194/426 (45%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F   + V      S  +++L++R+  + G   S   VFD M   G  P+       ++  
Sbjct: 134 FPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKL 193

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           +++G    A  +  Q R   V    F    +  A  +     +AV   +E   +  + + 
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             ++ ++     +G  + A      +   G SP++VTY  L+ G C+   +     ++KE
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +K   +   D V Y  +I+GYC+ G+MD AT + NEM   GI  +   +N +I+G  K+G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            M   + + + M   G  PD  ++++LIDGYCR G + +  ++C  M    L+    T+ 
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+   C  + ++DA R    +    + P     + ++DG  KAG  ++A  +  E   +
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR 493

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               + +TF  +I G C  GRM EA  + ++M  + C PD +T  +L     K G    A
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553

Query: 562 FRIMQR 567
             +M +
Sbjct: 554 THLMNK 559



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 224/507 (44%), Gaps = 98/507 (19%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-NSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY L+++  C+ G  +  + V   M+  G +  +       ++   + G+ D A  + ++
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   + ++ F+YN+++N L K    +E   + +E   +  +PD +++N LI G  R G 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV--------------------NEVA--- 313
           ++KAFE    M   G +   +TYNTL+ G C +                    NE++   
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 314 ------------RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                       +   L KE   +   + +V+T+ +VI+G CK+G+M +A  + + M   
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARG-LAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV------------------- 402
              P ++T+  L DG+ K+G + +A ++  +M   G+ P V                   
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKV 588

Query: 403 ----------------VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
                           VT+ +LI G+C+ G L++   L  EM    ++PNV+  + L++ 
Sbjct: 589 NDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSC 648

Query: 447 LCKENRLNDARRFLKQLKWNDLVP--------------------------KPFMYNPVID 480
             KE ++++A   L++L   D++P                             M+N +I 
Sbjct: 649 FYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIF 708

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK+G + +A  +   +  KR  PD  T++ LI G    G + EA S+ + ML  G  P
Sbjct: 709 GLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTP 768

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           + IT NSLI  L K G  + A  +  +
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNK 795



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 215/495 (43%), Gaps = 65/495 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C +   D    ++  M   G  PN       +    +AGK + A  L  + 
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   +N+++N L K     EA  +      L   PD+ T+  L  G  ++G++
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A      M   G +P +  +N+ I+G     +  + +++  E+  +   SP++VTY +
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG-LSPNLVTYGA 609

Query: 338 VISGYC-----------------------------------KLGKMDKATGIYNEMNSCG 362
           +I+G+C                                   K GK+D+A  +  ++ +  
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669

Query: 363 IKP--------------------------SAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           + P                          + V +NV+I G  K G +  A+ + E + + 
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            +LPD  T+SSLI G   +G +++   L D M    L+PN+ T+  LI  LCK  +L+ A
Sbjct: 730 RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRA 789

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                +L+   + P    YN +ID +CK G   EA  +  +M E+  +P  +T++ILI G
Sbjct: 790 VNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYG 849

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL-- 574
            C +G M EAI + ++M+     P+ IT  +LI   +K G   E  ++         L  
Sbjct: 850 LCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909

Query: 575 -QLPSWKKAVPLRTN 588
             + +WK++ P+  N
Sbjct: 910 NWIGNWKRSDPVVVN 924



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 191/397 (48%), Gaps = 2/397 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S ++ N ++  L + G      +V+  MR  G LP+   +     +  R G+   A   +
Sbjct: 182 SLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFV 241

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     + ++   Y+++++        ++A  + +   R    P+  T+ +L++G  + 
Sbjct: 242 EEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKD 301

Query: 275 GEVKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           G +++A     +M   G    D V Y  +I+G C+   +     +  E++  +    ++ 
Sbjct: 302 GRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLF 360

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y ++I+G CKLG+M++   +  EM   G++P   ++N LIDG+ + G+M  A  M   M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G     +T+++L+ G+C    ++  L+L   M  + ++PN  + + L++ L K  + 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A    K+     L      +N VI+G CK G + EA  ++  M+E RC PD +T+  L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             G+C  G++  A  + NKM  +G AP     NS I+
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFIT 577



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 176/342 (51%), Gaps = 2/342 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N LLN LV+  +   A  ++ +       PD +T  I+ +   R G V +A EF  +M  
Sbjct: 187 NRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEG 246

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G   ++V Y+ ++   C +        +L+ ++ K   SP+VVTYT ++ GYCK G+M+
Sbjct: 247 MGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG-LSPNVVTYTLLVKGYCKDGRME 305

Query: 350 KATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           +A  +  EM   G I    V + ++I+G+ + G M  A  +R  M   G   ++  ++++
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTM 365

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G C+ G++ +  K+  EM+   + P+ Y++  LI+  C+E  +  A    + +  N L
Sbjct: 366 INGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL 425

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                 YN ++ GFC    +D+A  +   M ++   P++++ + L+ G    G+  +A++
Sbjct: 426 AATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++ + L  G A + IT N++I+ L K G   EA  ++ R  E
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 159/320 (49%), Gaps = 33/320 (10%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           E S   LS N    TY  ++   C+ G LH++  + F+ M ++G  PN  +    +S   
Sbjct: 594 EMSARGLSPN--LVTYGALIAGWCKEGNLHEACNLYFE-MVNNGMNPNVFICSALMSCFY 650

Query: 203 RAGKCDAAKGLLSQFR-----PGEVTMSTF----------------------MYNSLLNA 235
           + GK D A  +L +       PG  ++ST                       M+N ++  
Sbjct: 651 KEGKVDEANLVLQKLVNIDMIPG-CSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFG 709

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L K     +A  +F+        PD +T++ LI G +  G + +AF     M S G +P+
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           I+TYN+LI GLC+  +++R   L  +++ K   SP+ +TY ++I  YCK GK  +A  + 
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKG-ISPNGITYNTLIDEYCKEGKTTEAFKLK 828

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            +M   GI+P+ +T+++LI G    G M  A  + ++M+     P+ +T+ +LI GY ++
Sbjct: 829 QKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKS 888

Query: 416 GQLNQGLKLCDEMKGKNLSP 435
           G + +  KL DEM  + L P
Sbjct: 889 GNMEEISKLYDEMHIRGLLP 908



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 76/173 (43%)

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            V+F  L+  +   GQL+  L + D M      P++ +   L+N L +      A     
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q++   ++P  F    +   +C+ G V +A   V EME    + + V +  ++  +C  G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
              +A  I   + R G +P+ +T   L+    K G   EA R+++   E  ++
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 181/339 (53%), Gaps = 1/339 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN+L+ A  ++   +EA  +         +P  +T+N +I GL + G   +A     +M 
Sbjct: 4   YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G SPD  TYNTL+   CR +  +   E+  E+  +    PD+V+++S+++ + +   +
Sbjct: 64  NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM-LRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A   + +M   G+ P  V + VL+ G+ + GNM+ A  +R+ ML  G + DV+ ++++
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ++G C+   L    KL DEM  +   P+ YTFT LI+  C++  +  A      +   ++
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +IDGFCK G +++A+ +   M  ++  P+ +T+ ILI  +C  G + EA  
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +++ M+  G  P  +T N++I    + G  ++A   + R
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 341



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 176/362 (48%), Gaps = 11/362 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ + C  GL +    + + M   G  P+       ++   + G+   AKG+L + 
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++  T  YN+LL    +++N  EA  +F E  R    PD  +F+ L+   SR   +
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP-----DV 332
            +A  +F DM  FG  PD V Y  L+ G C      R   +L+ +K + E        DV
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYC------RNGNMLEALKIRDEMLEQGCVLDV 176

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           + Y ++++G CK   +  A  +++EM   G  P   TF  LI G  + GNM  A  +   
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 236

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M      PD+V +++LIDG+C+ G++ +  +L D M  + + PN  T+ ILINA C    
Sbjct: 237 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 296

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A R    +    + P     N VI G+C++G+  +A+  +  M  K   PD +++  
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 356

Query: 513 LI 514
           LI
Sbjct: 357 LI 358



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 174/354 (49%), Gaps = 1/354 (0%)

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            + +  R G  + A  +++      +  S F YN+++N L K+     A  +  E   + 
Sbjct: 7   LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
             PDT T+N L+    R     +A E F +M   G  PD+V++++L++   R   + +  
Sbjct: 67  LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
              +++K K    PD V YT ++ GYC+ G M +A  I +EM   G     + +N +++G
Sbjct: 127 VYFRDMK-KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 185

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K   +  A+ + + M+  G LPD  TF++LI G+C++G + + L L   M  +N+ P+
Sbjct: 186 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 245

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           +  +  LI+  CK   +  A      +    + P    Y  +I+ +C  G+V EA  +  
Sbjct: 246 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 305

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            M EK  KP  VT   +I G+C  G   +A     +M+  G APD I+ N+LI+
Sbjct: 306 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 163/336 (48%), Gaps = 3/336 (0%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE-FFVSSCIRA 204
           S  +  L  S  TYN ++  LC+ G +   + +   M + G  P++       V SC R 
Sbjct: 26  SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 85

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
              +A +      R G V      ++SL+    +  + D+A+  F++  +    PD   +
Sbjct: 86  NFSEAKEIFGEMLRQG-VVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 144

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
            +L+ G  R G + +A +   +M   GC  D++ YNT+++GLC+   +    +L  E+  
Sbjct: 145 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 204

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           +    PD  T+T++I G+C+ G M KA  ++  M    IKP  V +N LIDGF KVG M 
Sbjct: 205 RGAL-PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 263

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  + + M+S    P+ +T+  LI+ YC  G +++  +L D M  K + P + T   +I
Sbjct: 264 KASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 323

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              C+    + A  FL ++    + P    YN +I+
Sbjct: 324 KGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 143/275 (52%), Gaps = 8/275 (2%)

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +VTYNTLI   CR   +    E++  +  K    P + TY ++I+G CK G+  +A GI 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAKGIL 59

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            EM + G+ P   T+N L+    +  N   A+ +   ML  G +PD+V+FSSL+  + RN
Sbjct: 60  IEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRN 119

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
             L+Q L    +MK   L P+   +T+L++  C+   + +A +   ++     V     Y
Sbjct: 120 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +++G CK   + +A+ +  EM E+   PD  TFT LI GHC  G M +A+S+F  M +
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
               PD +  N+LI    K G        M++ASE
Sbjct: 240 RNIKPDIVAYNTLIDGFCKVGE-------MEKASE 267


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 159/287 (55%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAM 203

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 263

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++MLS   LPD++T+++LI G C+ G L Q   L DEM  K L P+ +T+T L
Sbjct: 264 DLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 323

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T++I   C KG + +   +  +M R G AP  +T N L++
Sbjct: 384 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMN 430



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 207/431 (48%), Gaps = 28/431 (6%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N +  H+  +Y  ++  LC   +    +                +IE  VS   R G
Sbjct: 9   SPANSTFRHTLHSYCTMIHFLCTHQMLSEAK---------------SLIEVVVS---RKG 50

Query: 206 KCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-- 262
           K  A+    +     G      ++++ L+ A ++     +A+    E +RL  +   W  
Sbjct: 51  KGSASAVFAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAI----ECYRLTREHKLWVP 106

Query: 263 --TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T   +++ L ++   K  + F+ ++   G    +  +N L+   C+  ++     +  
Sbjct: 107 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 166

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  K    P VV+Y ++++GY +LG +D+   + + M + G++P   T++VLI+G  K 
Sbjct: 167 AIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKE 225

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             M  A  + + ML  G +P+ VTF++LIDG+C+NG+++  +++  +M  ++L P++ T+
Sbjct: 226 SKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITY 285

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI  LCK+  L  A   + ++    L P  F Y  +IDG CK G++D A      M +
Sbjct: 286 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 345

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  + D V +T LI G C +GR V+A  +  +ML +G  PD  T   +I+   K G   +
Sbjct: 346 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWK 405

Query: 561 AFRIMQRASED 571
             ++++    D
Sbjct: 406 GSKLLKEMHRD 416



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 158/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKG-LVPNGVTFTTLIDGHCK 259

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++  A  + + M   G  PD  T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 319

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM      P  VT+ +L+ G
Sbjct: 380 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 164/354 (46%), Gaps = 10/354 (2%)

Query: 101 TLLLRSSYLSDT--CARYLCEK--LSPLNS----LEVIKRLDNPKLGLKFLEFSRVNLSL 152
           T  L S +L D   C R   E     P ++    LE + +L   KL   F E   +    
Sbjct: 80  TAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE-EILECGY 138

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
             S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    
Sbjct: 139 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L S      V    + Y+ L+N L K++  D A  +F E       P+  TF  LI G  
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHC 258

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G V  A E +  M S    PD++TYNTLI GLC+  ++ + H+L+ E+  K    PD 
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG-LKPDK 317

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            TYT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           MLS G  PD  T++ +I+ +C+ G + +G KL  EM     +P+V T+ +L+N 
Sbjct: 378 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 207/419 (49%), Gaps = 2/419 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           + L  +   Y+ VM   C MG  +  + + + ++  G  PN       V    + G+ + 
Sbjct: 247 MGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEE 306

Query: 210 AKGLLSQFR-PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           A+ ++ + +  G++ +    Y  ++N   ++   D+A  +  E        + + +N +I
Sbjct: 307 AERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMI 366

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL ++G +++  +   +M   G  PD  +YNTLI G CR   + +  E+ + +  ++  
Sbjct: 367 NGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCR-MMVRNGL 425

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +   +TY +++ G+C L  +D A  ++  M   G+ P+ ++ + L+DG  K G    A  
Sbjct: 426 AATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + +  L+ G   +V+TF+++I+G C+ G++ +  +L D MK     P+  T+  L +  C
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYC 545

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  +L  A   + +++     P   M+N  I G   A    + N I +EM  +   P+ V
Sbjct: 546 KLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLV 605

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T+  LI G C +G + EA +++ +M+  G  P+    ++L+SC  K G  +EA  ++Q+
Sbjct: 606 TYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 194/426 (45%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F   + V      S  +++L++R+  + G   S   VFD M   G  P+       ++  
Sbjct: 134 FPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKL 193

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           +++G    A  +  Q R   V    F    +  A  +     +AV   +E   +  + + 
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             ++ ++     +G  + A      +   G SP++VTY  L+ G C+   +     ++KE
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +K   +   D V Y  +I+GYC+ G+MD AT + NEM   GI  +   +N +I+G  K+G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            M   + + + M   G  PD  ++++LIDGYCR G + +  ++C  M    L+    T+ 
Sbjct: 374 RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYN 433

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+   C  + ++DA R    +    + P     + ++DG  KAG  ++A  +  E   +
Sbjct: 434 TLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR 493

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               + +TF  +I G C  GRM EA  + ++M  + C PD +T  +L     K G    A
Sbjct: 494 GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTA 553

Query: 562 FRIMQR 567
             +M +
Sbjct: 554 THLMNK 559



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 224/507 (44%), Gaps = 98/507 (19%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-NSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY L+++  C+ G  +  + V   M+  G +  +       ++   + G+ D A  + ++
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   + ++ F+YN+++N L K    +E   + +E   +  +PD +++N LI G  R G 
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV--------------------NEVA--- 313
           ++KAFE    M   G +   +TYNTL+ G C +                    NE++   
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 314 ------------RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                       +   L KE   +   + +V+T+ +VI+G CK+G+M +A  + + M   
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARG-LAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV------------------- 402
              P ++T+  L DG+ K+G + +A ++  +M   G+ P V                   
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKV 588

Query: 403 ----------------VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
                           VT+ +LI G+C+ G L++   L  EM    ++PNV+  + L++ 
Sbjct: 589 NDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSC 648

Query: 447 LCKENRLNDARRFLKQLKWNDLVP--------------------------KPFMYNPVID 480
             KE ++++A   L++L   D++P                             M+N +I 
Sbjct: 649 FYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIF 708

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G CK+G + +A  +   +  KR  PD  T++ LI G    G + EA S+ + ML  G  P
Sbjct: 709 GLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTP 768

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
           + IT NSLI  L K G  + A  +  +
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNK 795



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 191/397 (48%), Gaps = 2/397 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S ++ N ++  L + G      +V+  MR  G LP+   +     +  R G+   A   +
Sbjct: 182 SLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFV 241

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     + ++   Y+++++        ++A  + +   R    P+  T+ +L++G  + 
Sbjct: 242 EEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKD 301

Query: 275 GEVKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           G +++A     +M   G    D V Y  +I+G C+   +     +  E++  +    ++ 
Sbjct: 302 GRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLF 360

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y ++I+G CKLG+M++   +  EM   G++P   ++N LIDG+ + G+M  A  M   M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G     +T+++L+ G+C    ++  L+L   M  + ++PN  + + L++ L K  + 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A    K+     L      +N VI+G CK G + EA  ++  M+E RC PD +T+  L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             G+C  G++  A  + NKM  +G AP     NS I+
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFIT 577



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 176/342 (51%), Gaps = 2/342 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N LLN LV+  +   A  ++ +       PD +T  I+ +   R G V +A EF  +M  
Sbjct: 187 NRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEG 246

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G   ++V Y+ ++   C +        +L+ ++ K   SP+VVTYT ++ GYCK G+M+
Sbjct: 247 MGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG-LSPNVVTYTLLVKGYCKDGRME 305

Query: 350 KATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           +A  +  EM   G I    V + ++I+G+ + G M  A  +R  M   G   ++  ++++
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTM 365

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+G C+ G++ +  K+  EM+   + P+ Y++  LI+  C+E  +  A    + +  N L
Sbjct: 366 INGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL 425

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                 YN ++ GFC    +D+A  +   M ++   P++++ + L+ G    G+  +A++
Sbjct: 426 AATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           ++ + L  G A + IT N++I+ L K G   EA  ++ R  E
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 203/495 (41%), Gaps = 84/495 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++  C +   D    ++  M   G  PN       +    +AGK + A  L  + 
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   +N+++N L K     EA  +      L   PD+ T+  L  G  ++G++
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A      M   G +P +  +N+ I+G     +  + +++  E+  +   SP++VTY +
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG-LSPNLVTYGA 609

Query: 338 VISGYC-----------------------------------KLGKMDKATGIYNEMNSCG 362
           +I+G+C                                   K GK+D+A  +  ++ +  
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669

Query: 363 IKP--------------------------SAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           + P                          + V +NV+I G  K G +  A+ + E + + 
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            +LPD  T+SSLI G   +G +++   L D M    L+PN+ T+  LI  LCK  +L+ A
Sbjct: 730 RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRA 789

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                +L+   + P    YN +ID +CK G   EA  +  +M E                
Sbjct: 790 VNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVE---------------- 833

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL-- 574
              +G M EAI + ++M+     P+ IT  +LI   +K G   E  ++         L  
Sbjct: 834 ---EGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890

Query: 575 -QLPSWKKAVPLRTN 588
             + +WK++ P+  N
Sbjct: 891 NWIGNWKRSDPVVVN 905



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 146/320 (45%), Gaps = 52/320 (16%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           E S   LS N    TY  ++   C+ G LH++  + F+ M ++G  PN  +    +S   
Sbjct: 594 EMSARGLSPN--LVTYGALIAGWCKEGNLHEACNLYFE-MVNNGMNPNVFICSALMSCFY 650

Query: 203 RAGKCDAAKGLLSQFR-----PGEVTMSTF----------------------MYNSLLNA 235
           + GK D A  +L +       PG  ++ST                       M+N ++  
Sbjct: 651 KEGKVDEANLVLQKLVNIDMIPG-CSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFG 709

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
           L K     +A  +F+        PD +T++ LI G +  G + +AF     M S G +P+
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           I+TYN+LI GLC+  +++R   L  +++ K   SP+ +TY ++I  YCK GK  +A  + 
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKG-ISPNGITYNTLIDEYCKEGKTTEAFKLK 828

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            +M   G    A+                    + ++M+     P+ +T+ +LI GY ++
Sbjct: 829 QKMVEEGYMEEAIK-------------------LLDQMIENNVDPNYITYCTLIHGYIKS 869

Query: 416 GQLNQGLKLCDEMKGKNLSP 435
           G + +  KL DEM  + L P
Sbjct: 870 GNMEEISKLYDEMHIRGLLP 889



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 76/173 (43%)

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            V+F  L+  +   GQL+  L + D M      P++ +   L+N L +      A     
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q++   ++P  F    +   +C+ G V +A   V EME    + + V +  ++  +C  G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
              +A  I   + R G +P+ +T   L+    K G   EA R+++   E  ++
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320


>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
          Length = 581

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 192/401 (47%), Gaps = 2/401 (0%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           HD+V+V FD+MR+ G  P++      +++  RA     A+ +  +     +  +T +YN+
Sbjct: 125 HDAVRV-FDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNA 183

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           +L+  +K  +A +A  +           D +++N +I    R G   +A      M   G
Sbjct: 184 MLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEG 243

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             PD VT+N+ I GLC+   V    +L  E+   ++ +PD VTYT++I GYC+ G +++A
Sbjct: 244 IRPDTVTWNSSIHGLCKEGRVKEAAQLFTEM-VAAQATPDNVTYTTLIDGYCRAGNVEEA 302

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             +   M + G+ P   T+N ++    + GNM     +   M       D VT ++LI+ 
Sbjct: 303 VKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINA 362

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           YC+ G +    K+  +M    L  N +T+  LI+  CK   L+ A+    Q+      P 
Sbjct: 363 YCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPN 422

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
             +++ ++DGFCK  N D    I  E+ ++   PDK  +  LI   C KG + +A  +F+
Sbjct: 423 YSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFD 482

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +M   G   D +   +L    L  G P  A   +   +++Q
Sbjct: 483 QMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQ 523



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 182/378 (48%), Gaps = 9/378 (2%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++ +L    +  + + VFD M   G    + +    +  C++AG    A+ ++++     
Sbjct: 149 LLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAG 208

Query: 222 VTMSTFMYNSLLNALVKQNNADEAV----YMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           VT+  F YN+++    ++    EA+     M KE  R    PDT T+N  I GL + G V
Sbjct: 209 VTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIR----PDTVTWNSSIHGLCKEGRV 264

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A + F +M +   +PD VTY TLI G CR   V    +L   ++      P V TY +
Sbjct: 265 KEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGML-PGVATYNA 323

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   C+ G M +   + +EM+   ++   VT N LI+ + K G+M SA  ++++M+  G
Sbjct: 324 ILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESG 383

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +  T+ +LI G+C+  +L+   +   +M     SPN   F+ L++  CK+N  +   
Sbjct: 384 LQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVL 443

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               +L    L P   +Y  +I   C+ G VD+A  +  +M+ K    D + +  L   +
Sbjct: 444 AIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTY 503

Query: 518 CMKGRMVEAISIFNKMLR 535
             KG    A++  + M +
Sbjct: 504 LTKGNPTAALNTLDGMTK 521



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 139/319 (43%), Gaps = 1/319 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+   C  G+        D M  +G  P++      +    + G+   A  L ++ 
Sbjct: 215 SYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEM 274

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              + T     Y +L++   +  N +EAV +          P   T+N +++ L   G +
Sbjct: 275 VAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNM 334

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+     ++M       D VT NTLI+  C+  ++    ++ K++  +S    +  TY +
Sbjct: 335 KEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKM-MESGLQLNHFTYKA 393

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK  ++D A   + +M   G  P+   F+ L+DGF K  N  +   + + ++  G
Sbjct: 394 LIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRG 453

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD   + SLI   CR G ++Q  ++ D+M+ K L  +   +  L      +     A 
Sbjct: 454 LPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAAL 513

Query: 458 RFLKQLKWNDLVPKPFMYN 476
             L  +  N L   P +YN
Sbjct: 514 NTLDGMTKNQLYITPQIYN 532


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 192/385 (49%), Gaps = 4/385 (1%)

Query: 183 RSDGHLPNS--PMI-EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
           R+ G  P S  P+     V    ++G+ D A+ LL       V+++   YNSLL+  V+Q
Sbjct: 166 RALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQ 225

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
            +      + +       +    T+ IL+  LS   ++ K    F +M +     D+  Y
Sbjct: 226 KDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLY 285

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
             +I+  CR   + R  ++L E    +   P+  TY  +I+G+CK+G+M+ A  +  +M 
Sbjct: 286 TAVINAYCRAGNMRRAAKVLDEC-VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 344

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
             G+  + + FN +IDG+ + G +  A  ++  M   G   D+ T+++L  G CR  +L+
Sbjct: 345 GQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLD 404

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           +   L   M    + PN  T+T LI+  CK+  + +ARR  +++      P    YN +I
Sbjct: 405 EAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMI 464

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DG+ K G++ EA     EME+K   PD  T+  L+ GHC+ G++  A+ +F +M + G  
Sbjct: 465 DGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTE 524

Query: 540 PDDITVNSLISCLLKGGMPNEAFRI 564
           P+ +   +LIS L K G    AF++
Sbjct: 525 PNVVAYTALISGLAKEGRSEAAFQL 549



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 168/331 (50%), Gaps = 1/331 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  +  +  TY +++ SL        V+ +F+ M+++  + +  +    +++  RAG   
Sbjct: 240 NEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMR 299

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  +L +     V  +   Y  L+N   K    + A  +  +        +   FN +I
Sbjct: 300 RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 359

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  R G V  A +    M   G   DI TYNTL  GLCRVN +     LL  +  +   
Sbjct: 360 DGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL-HIMIEMGV 418

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+ VTYT++IS +CK G M +A  ++ EM   G  PS VT+NV+IDG+ K G++  AE 
Sbjct: 419 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAER 478

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
            R+ M   G++PDV T++SL+ G+C NG+++  LKL +EMK +   PNV  +T LI+ L 
Sbjct: 479 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 538

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           KE R   A +    +    L+P   +Y+ ++
Sbjct: 539 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 190/393 (48%), Gaps = 1/393 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           ++V+  LC+ G  D  + + D M   G   N+      +   +R       + +L     
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +  +   Y  L+++L    +  +   +F E        D + +  +I    R G +++
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A +   +    G  P+  TY  LI+G C++ ++     LL +++ +     + + + ++I
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQG-VGLNQIIFNTMI 359

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            GYC+ G +D A  I   M   G++    T+N L  G  +V  +  A+ +   M+  G +
Sbjct: 360 DGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVV 419

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+ VT+++LI  +C++G + +  +L  EM  K  +P+V T+ ++I+   K+  + +A RF
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            K+++    VP  + Y  ++ G C  G VD A  +  EM+++  +P+ V +T LI G   
Sbjct: 480 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK 539

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +GR   A  +++ ML+ G  PDD   ++L+  L
Sbjct: 540 EGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 1/294 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  V+ + C  G       V D    +G  PN       ++   + G+ +AA+ LL+  +
Sbjct: 285 YTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQ 344

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V ++  ++N++++   ++   D+A+ +     ++  + D +T+N L  GL R+  + 
Sbjct: 345 GQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLD 404

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A    + M   G  P+ VTY TLIS  C+  ++     L +E+  K   +P VVTY  +
Sbjct: 405 EAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGA-TPSVVTYNVM 463

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GY K G + +A     EM   G  P   T+  L+ G    G +  A  + E M   G 
Sbjct: 464 IDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGT 523

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
            P+VV +++LI G  + G+     +L D+M    L P+   ++ L+ +L  +NR
Sbjct: 524 EPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNR 577



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 121/229 (52%)

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V+ G CK G++D A  + ++M   G+  +A+ +N L+D + +  +    + + E M + G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               V T++ L+D       +++   L +EMK  N+  +VY +T +INA C+   +  A 
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L +   N + P    Y  +I+GFCK G ++ A +++A+M+ +    +++ F  +I G+
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C KG + +A+ I   M ++G   D  T N+L   L +    +EA  ++ 
Sbjct: 363 CRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLH 411



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 4/177 (2%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           + RLD  K  L  +    + + +  ++ TY  ++   C+ G     + +F  M   G  P
Sbjct: 400 VNRLDEAKTLLHIM----IEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 455

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +       +    + G    A+    +          + Y SL++        D A+ +F
Sbjct: 456 SVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLF 515

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
           +E  +  ++P+   +  LI GL++ G  + AF+ + DM   G  PD   Y+ L+  L
Sbjct: 516 EEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 197/423 (46%), Gaps = 11/423 (2%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N  + SLC+ G       +FD M + GH P+       +      G      GL +  + 
Sbjct: 374 NSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKS 433

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +     ++N L++A  K+   D+A+ +F E  +    PD  T++ +I   SR+G +  
Sbjct: 434 NGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTD 493

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A E F  M + G  P+   Y+++I G C    + +  EL+ E+  K    PD+V + SVI
Sbjct: 494 AMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVI 553

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +  CK G++  A  I++ +   G +P  +TF  LIDG+  VG M  A  + + M   G  
Sbjct: 554 NSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVE 613

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            D+VT+S+L+DGY +NG++N GL L  EM+ K + PN  T+ I++  L +  R   AR+ 
Sbjct: 614 TDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKK 673

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++  +       +Y  ++ G C+    DEA ++  ++     K        +I     
Sbjct: 674 FHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYK 733

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
             R  EA  +F  +   G  P++ T   +I  LLK G           A ED N    S 
Sbjct: 734 VQRKEEAKELFATISASGLLPNESTYGVMIINLLKDG-----------AVEDANNMFSSM 782

Query: 580 KKA 582
           +K+
Sbjct: 783 EKS 785



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 178/361 (49%), Gaps = 5/361 (1%)

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-YMFKEYFRLYSQP 259
           C RA + D    L        + +     ++LL  L   N  +EAV  +      L   P
Sbjct: 167 CCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVP 226

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISGLCRVNEVARGHE 317
           + ++++I+++GL      ++A + F  M   G  CSP++V YNT+I G  +  E  +   
Sbjct: 227 NVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACS 286

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E+  +    PDVVTY  +I   CK   MDKA  +  +M + G +P  VT+N +I G+
Sbjct: 287 LFHEMT-RQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGY 345

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
             +G +  A  M  +M S G +P++V  +S +   C++G+  +  ++ D M  K   P++
Sbjct: 346 ATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDI 405

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            ++  L++    E    D       +K N +     ++N +I  + K G VD+A +I  E
Sbjct: 406 VSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTE 465

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL-LKGG 556
           M+++   PD VT++ +I      GR+ +A+  FN+M+  G  P+    +S+I    + GG
Sbjct: 466 MQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG 525

Query: 557 M 557
           +
Sbjct: 526 L 526



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 199/411 (48%), Gaps = 2/411 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++ +LC+    D  ++V   M ++G  P++      +      G+   A  +  + 
Sbjct: 302 TYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKM 361

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  +  + NS L +L K   + EA  +F        +PD  ++  L+ G +  G  
Sbjct: 362 KSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWF 421

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                 F  M S G + D   +N LI    +   V     +  E++ +   SPDVVTY++
Sbjct: 422 ADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ-QQGVSPDVVTYST 480

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VIS + ++G++  A   +N+M + GI+P+   ++ +I GF   G +V A+ +   M++ G
Sbjct: 481 VISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 398 Y-LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD+V F+S+I+  C++G++     + D +      P+V TFT LI+  C   +++ A
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L  ++   +      Y+ ++DG+ K G +++   +  EM+ K  KP+ VT+ I++ G
Sbjct: 601 FKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
               GR V A   F++M+  G          ++  L +    +EA  + Q+
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQK 711



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 178/378 (47%), Gaps = 2/378 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + +N+++ +  + G+ D   ++F  M+  G  P+       +S+  R G+   A    +Q
Sbjct: 441 RVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQ 500

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIG 275
                +  +T +Y+S++          +A  +  E   +   +PD   FN +I  L + G
Sbjct: 501 MVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDG 560

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V  A + F  +   G  PD++T+ +LI G C V ++ +  ++L  ++       D+VTY
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG-VETDIVTY 619

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           ++++ GY K G+++    ++ EM   G+KP+ VT+ +++ G  + G  V+A      M+ 
Sbjct: 620 STLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G    V  +  ++ G CRN   ++ + L  ++   N+  ++     +INA+ K  R  +
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+     +  + L+P    Y  +I    K G V++AN + + ME+    P       +I 
Sbjct: 740 AKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIR 799

Query: 516 GHCMKGRMVEAISIFNKM 533
               KG + +A +  +K+
Sbjct: 800 MLLEKGEIAKAGNYLSKV 817


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 179/365 (49%), Gaps = 4/365 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-Y 247
           P S      +  C RA + + A     Q     + ++  + N LL    +    DEA+  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISG 305
           +      L   PD ++++IL++ L   G+  +A +    M   G  CSPD+V Y+T+I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             +  +V +  +L KE+  +    PD VTY+SV+   CK   MDKA     +M + G+ P
Sbjct: 229 FFKEGDVNKACDLFKEM-VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +  T+N LI G+   G    A  + + M     LPDVVT S L+   C+ G++ +   + 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K  +PNV+++TI++N    +  L D       +  + + P  + +N +I  +   
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D+A +I  EM +   KPD VT+  +I   C  G+M +A+  FN+M+  G APD    
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 546 NSLIS 550
           + LI 
Sbjct: 468 HCLIQ 472



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 205/422 (48%), Gaps = 4/422 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T +++M SLC+ G     + VFD M   G  PN       ++     G       L    
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLM 385

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + +N L+ A       D+A+ +F E      +PD  T+  +I  L RIG++
Sbjct: 386 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   G +PD   Y+ LI G C    + +  EL+ E+   +    D+V ++S
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI-MNNGMHLDIVFFSS 504

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CKLG++  A  I++   + G+ P+AV +++L+DG+  VG M  A  + + M+S G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V + +L++GYC+ G++++GL L  EM  K + P+   + I+I+ L +  R   A+
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  + +      YN V+ G  K    DEA  +  E+     K + +T   +I G 
Sbjct: 625 VKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGM 684

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
               R+ EA  +F  + R G  P  +T + +I+ L+K G+  EA   F  MQ A  + + 
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDS 744

Query: 575 QL 576
           +L
Sbjct: 745 RL 746



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 196/435 (45%), Gaps = 36/435 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           +Y+++++SLC+ G       +   M   G + +  ++ +   +    + G  + A  L  
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFK 243

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +      Y+S+++AL K    D+A    ++       P+ WT+N LI G S  G
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-------- 327
           + K+A   F +M      PD+VT + L+  LC+  ++    ++   +  K +        
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYT 363

Query: 328 --------------------------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                                      +PD+ T+  +I  Y   G +DKA  I+NEM   
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+KP  VT+  +I    ++G M  A     +M+  G  PD   +  LI G+C +G L + 
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +L  E+    +  ++  F+ +IN LCK  R+ DA+          L P   +Y+ ++DG
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +C  G +++A  +   M     +P+ V +  L+ G+C  GR+ E +S+F +ML+ G  P 
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 603

Query: 542 DITVNSLISCLLKGG 556
            I  N +I  L + G
Sbjct: 604 TILYNIIIDGLFEAG 618



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 220/479 (45%), Gaps = 42/479 (8%)

Query: 127 LEVIKRLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRS 184
           ++   R   P+L L F  +  R  L +N      N +++  CE    D ++ ++      
Sbjct: 118 MDCCTRAHRPELALAFFGQLLRTGLRVN--IIIANHLLKGFCEAKRTDEALDILLHRTPE 175

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNA 242
            G +P+       + S    GK   A  LL     G    S     Y+++++   K+ + 
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDV 235

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++A  +FKE  +    PD  T++ ++  L +   + KA  F   M + G  P+  TYN L
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G     +      + KE++ +    PDVVT + ++   CK GK+ +A  +++ M   G
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMR-RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P+  ++ ++++G+   G +V    + + ML  G  PD+ TF+ LI  Y   G L++ +
Sbjct: 355 QNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 414

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM+   + P+V T+  +I ALC+  +++DA     Q+    + P  + Y+ +I GF
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474

Query: 483 CKAGNVDEANVIVAEME---------------EKRCK--------------------PDK 507
           C  G++ +A  +++E+                   CK                    P  
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTA 534

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           V +++L+ G+C+ G+M +A+ +F+ M+  G  P+D+   +L++   K G  +E   + +
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 188/407 (46%), Gaps = 1/407 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F TY+ V+ +LC+    D  +     M + G LPN+      +      G+   A  +  
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + R   +       + L+ +L K     EA  +F         P+ +++ I++ G +  G
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKG 373

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +    + F  M   G +PDI T+N LI        + +   +  E++      PDVVTY
Sbjct: 374 CLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTY 432

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +VI+  C++GKMD A   +N+M   G+ P    ++ LI GF   G+++ A+ +   +++
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D+V FSS+I+  C+ G++     + D      L P    +++L++  C   ++  
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK 552

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A R    +    + P   +Y  +++G+CK G +DE   +  EM +K  KP  + + I+I 
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 612

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           G    GR V A   F++M   G A +  T N ++  L K    +EA 
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 185/397 (46%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y +++      G    +  +FD M  DG  P+       + +    G  D A  + ++ 
Sbjct: 361 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      Y +++ AL +    D+A+  F +       PD + ++ LIQG    G +
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E   ++ + G   DIV ++++I+ LC++  V     +  ++       P  V Y+ 
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPTAVVYSM 539

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC +GKM+KA  +++ M S GI+P+ V +  L++G+ K+G +     +   ML  G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + ++ +IDG    G+         EM    ++ N  T+ I++  L K    ++A 
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+L+  ++       N +I G  +   V+EA  + A +      P  VT++I+I   
Sbjct: 660 FLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNL 719

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +G + EA  +F+ M   GC PD   +N ++  LLK
Sbjct: 720 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 185/408 (45%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++++    G+ D   ++F+ MR  G  P+       +++  R GK D A    +Q 
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    + Y+ L+       +  +A  +  E        D   F+ +I  L ++G V
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F    + G  P  V Y+ L+ G C V ++ +   +  +    +   P+ V Y +
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNDVVYGT 574

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYCK+G++D+   ++ EM   GIKPS + +N++IDG  + G  V A+     M   G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +  T++ ++ G  +N   ++ + L  E++  N+  N+ T   +I  + +  R+ +A+
Sbjct: 635 IAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK 694

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  + LVP    Y+ +I    K G V+EA  + + M+   C+PD      ++   
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             K  +V A +  +K+     + + +T   L+      G   E  R +
Sbjct: 755 LKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 145/308 (47%), Gaps = 2/308 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P + T+ IL+   +R    + A  FF  +   G   +I+  N L+ G C         ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI--KPSAVTFNVLIDG 376
           L     +    PDV +Y+ ++   C  GK  +A  +   M   G    P  V ++ +IDG
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G++  A  + + M+  G  PD VT+SS++   C+   +++      +M  K + PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +T+  LI       +  +A R  K+++ + ++P     + ++   CK G + EA  +  
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K   P+  ++TI++ G+  KG +V+   +F+ ML  G APD  T N LI      G
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 557 MPNEAFRI 564
           M ++A  I
Sbjct: 409 MLDKAMII 416



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 6/253 (2%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
            SP   TY  ++    +  + + A   + ++   G++ + +  N L+ GF +      A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILI 444
           + +  R    G +PDV ++S L+   C  G+  Q   L   M   G   SP+V  ++ +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +   KE  +N A    K++    + P    Y+ V+   CKA  +D+A   + +M  K   
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA--- 561
           P+  T+  LI G+   G+  EA+ +F +M R    PD +T++ L+  L K G   EA   
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 562 FRIMQRASEDQNL 574
           F  M    ++ N+
Sbjct: 347 FDTMAMKGQNPNV 359



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 10/274 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN+ L+ +   Y+++M   C +G  +    VFD M S G  PN  +    V+   + G+ 
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    L  +     +  ST +YN +++ L +      A   F E        +  T+NI+
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIV 645

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++GL +     +A   F ++ +     +I+T NT+I+G+ +   V    +L   +  +S 
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASIS-RSG 704

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
             P VVTY+ +I+   K G +++A  +++ M + G +P +   N ++    K   +V A 
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAG 764

Query: 387 ---EYMRERMLSFGYLPDVV---TFSSLIDGYCR 414
                + ER  S  +L  ++    FSS   G CR
Sbjct: 765 AYLSKIDERNFSLEHLTTMLLVDLFSS--KGTCR 796


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 174/357 (48%), Gaps = 1/357 (0%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D  + +  +F+     M+ F  NSL+ +       +E +++++       +P  +TFN L
Sbjct: 172 DRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFL 231

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GL     ++ A   F  M      PD+V+YNT+I G C+     +  E   +++ K  
Sbjct: 232 LNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDME-KRN 290

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
             PD +TY ++I      G  D    +Y EM   G++     ++++I G  K G  V   
Sbjct: 291 LEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGS 350

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E M   G   +V  +++LID Y +NG +N+ + L + MKG+   P+  T+ +++N L
Sbjct: 351 SVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGL 410

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK  RL++A  + +  K N++      Y+ +IDG  KAG VDEA     EM E+ C  D 
Sbjct: 411 CKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDS 470

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             +  LI      G+M EA+ +F +M + GC     T   LIS L K     EA ++
Sbjct: 471 YCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKL 527



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 222/468 (47%), Gaps = 17/468 (3%)

Query: 107 SYLSDTCARYLCEKLSPLNSLEVIKRLD----NPKLGLKFLEFSRVNLSLNHSFKTYNLV 162
           S L   C+++L  KLSP N +  + + D     P +  +F  ++    +  H  + Y  +
Sbjct: 104 SNLDSYCSKFLI-KLSP-NFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSL 161

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA----GKCDAAKGLLSQFR 218
           +  L      D V+ +F   +  G L    M  F  +S IR+    G  +    +  + +
Sbjct: 162 IDVLSLSSDFDRVRCIFGEFKEKGFL----MTVFAANSLIRSFGALGMVEELLWVWRRMK 217

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  S + +N LLN LV     + A  +F+        PD  ++N +I+G  + G  K
Sbjct: 218 ESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTK 277

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVTYTS 337
           KA E F DM      PD +TY TLI              L +E++ +  E  P    Y+ 
Sbjct: 278 KAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPH--AYSL 335

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G CK G+  + + ++  MN  G K +   +  LID +GK GN+  A  + ERM   G
Sbjct: 336 VIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEG 395

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           + PD VT+  +++G C++G+L++ ++  +  K   ++ N   ++ LI+ L K  R+++A 
Sbjct: 396 FEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAE 455

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +F +++         + YN +ID   K+G ++EA V+   ME++ C     T+TILI G 
Sbjct: 456 KFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGL 515

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             + R  EA+ +++ M+  G  P   +  +L   L   G    A +I+
Sbjct: 516 FKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKIL 563



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 164/350 (46%), Gaps = 6/350 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y SL++ L   ++ D    +F E+         +  N LI+    +G V++    +  M 
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMK 217

Query: 289 SFGCSPDIVTYNTLISGLCRVNEV-ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
             G  P + T+N L++GL  VN +     E + EV    +  PDVV+Y ++I GYCK G 
Sbjct: 218 ESGIEPSLYTFNFLLNGL--VNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGN 275

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
             KA   + +M    ++P  +T+  LI      GN  S  ++ + M   G       +S 
Sbjct: 276 TKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSL 335

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           +I G C++G+  +G  + + M  K    NV  +T LI+A  K   +N+A    +++K   
Sbjct: 336 VIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEG 395

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
             P    Y  +++G CK+G +DEA       ++     + + ++ LI G    GR+ EA 
Sbjct: 396 FEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAE 455

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
             F +M+  GC  D    N+LI  L K G   EA   F+ M++   DQ +
Sbjct: 456 KFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTV 505



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 188/436 (43%), Gaps = 2/436 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T+N ++  L      +S + VF+ M      P+       +    +AG    A    
Sbjct: 224 SLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKF 283

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +      +      Y +L+ A   + N D  +++++E      +     ++++I GL + 
Sbjct: 284 TDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKD 343

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G   +    F +M   GC  ++  Y  LI    +   V     L + +K +  F PD VT
Sbjct: 344 GRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEG-FEPDDVT 402

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +++G CK G++D+A   +       +  +A+ ++ LIDG GK G +  AE   E M+
Sbjct: 403 YGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMV 462

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   D   +++LID   ++G++ + L L   M+ +     VYT+TILI+ L KE+R  
Sbjct: 463 ERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNE 522

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A +    +    + P    +  +  G C +G V  A  I+ E+      P+   F  +I
Sbjct: 523 EALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPE-TAFEDMI 581

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
              C  GR  +A  + + ++  G          LI+ L K G  + A ++M         
Sbjct: 582 NVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYD 641

Query: 575 QLPSWKKAVPLRTNTD 590
           ++ S K+ V  R   D
Sbjct: 642 RMGSIKRRVKFRVLVD 657



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 2/299 (0%)

Query: 275 GEVKKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           G+   AF FF+  G        I  Y +LI  L   ++  R   +  E K K  F   V 
Sbjct: 133 GKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKG-FLMTVF 191

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
              S+I  +  LG +++   ++  M   GI+PS  TFN L++G      + SAE + E M
Sbjct: 192 AANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVM 251

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                 PDVV+++++I GYC+ G   + ++   +M+ +NL P+  T+  LI A   E   
Sbjct: 252 ECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNF 311

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +      ++++   L   P  Y+ VI G CK G   E + +   M +K CK +   +T L
Sbjct: 312 DSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTAL 371

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           I  +   G + EAI++F +M   G  PDD+T   +++ L K G  +EA    +   +++
Sbjct: 372 IDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNE 430


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 158/287 (55%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+  +  G  L K   
Sbjct: 142 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRL-KSAM 200

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 201 LASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRV 260

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + +RMLS   LPD++T+++LI G C+ G L Q   L DEM  K L P+ +T+T L
Sbjct: 261 DFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 320

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 321 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGL 380

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T++I   C KG + +   +  +M R G AP  +T N L++
Sbjct: 381 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 427



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 198/416 (47%), Gaps = 28/416 (6%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N +  H+  +Y  ++  LC   +    +                +I+  VS   R G
Sbjct: 6   SPANSTFRHTLHSYCTMIHFLCTHQMLSEAK---------------SLIQVVVS---RKG 47

Query: 206 KCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-- 262
           K  A+    +     G      ++++ L+ A ++     +A+    E +RL  +   W  
Sbjct: 48  KGSASAVFAAILETKGTQRSDIYVFSGLITAYLETGFLRDAI----ECYRLTREHKLWVP 103

Query: 263 --TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T   +++ L ++   K  + F+ ++   G    +  +N L+   C+  ++     +  
Sbjct: 104 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 163

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  K    P VV+Y ++++GY +LG +D+   + + M + G+ P   T++VLI+G  K 
Sbjct: 164 AIT-KWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKE 222

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             M  A  + + ML  G +P+ VTF++LIDG+C+NG+++  +++   M  ++L P++ T+
Sbjct: 223 SKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITY 282

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI  LCK+  L  A   + ++    L P  F Y  +IDG CK G++D A      M +
Sbjct: 283 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 342

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +  + D V +  LI G C +GR V+A  +  +ML +G  PD  T   +I+   K G
Sbjct: 343 ENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 398



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 156/292 (53%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G + + F   
Sbjct: 138 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLK 197

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK
Sbjct: 198 SAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LIPNGVTFTTLIDGHCK 256

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY  M S  + P  +T+N LI G  K G++  A  + + M   G  PD  T
Sbjct: 257 NGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 316

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +  LI+ LC+E R  DA + L+++ 
Sbjct: 317 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREML 376

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 377 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 144/292 (49%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 138 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLK 197

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  + 
Sbjct: 198 SAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKN 257

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S    PD++TYNTLI GLC+  ++ + H+L+ E+  K    PD  T
Sbjct: 258 GRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG-LKPDKFT 316

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   ML
Sbjct: 317 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREML 376

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           S G  PD  T++ +I+ +C+ G + +G KL  EM+    +P+V T+ +L+N 
Sbjct: 377 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 131/225 (58%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +CK G +  A  +++ +   G++PS V++N L++G+ ++G++     ++  ML+ G LPD
Sbjct: 149 FCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPD 208

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V T+S LI+G C+  +++   +L DEM  K L PN  TFT LI+  CK  R++ A    K
Sbjct: 209 VYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYK 268

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++    L+P    YN +I G CK G++ +A+ ++ EM  K  KPDK T+T LI G C +G
Sbjct: 269 RMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 328

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +  A     +M++     DD+   +LIS L + G   +A ++++
Sbjct: 329 DLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLR 373



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 8/285 (2%)

Query: 295 DIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           DI  ++ LI+       + +    + L +E K    F     T   V+    KL      
Sbjct: 68  DIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFD----TCRKVLEHLMKLKYFKLV 123

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
            G Y E+  CG   S   FN+L+  F K G++  A+ + + +  +G  P VV++++L++G
Sbjct: 124 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG 183

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y R G L++G +L   M    + P+VYT+++LIN LCKE++++DA     ++    L+P 
Sbjct: 184 YIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPN 243

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +  +IDG CK G VD A  I   M  +   PD +T+  LI G C KG + +A  + +
Sbjct: 244 GVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 303

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           +M   G  PD  T  +LI    K G  + AF   +R  + +N++L
Sbjct: 304 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ-ENIRL 347


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 186/384 (48%), Gaps = 1/384 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++ ++++  CE G       +   +   G  PN  +    +  C + G    AK L  + 
Sbjct: 160 SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKM 219

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   Y+ L+N   KQ    E   M++   R    P+ + +N LI      G V
Sbjct: 220 NRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMV 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KAF+ F +M   G +  ++TYN LI GLCR  +     +L+ +V  K   SP++VTY  
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN-KVGLSPNIVTYNI 338

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+G+C + KMD A  ++N++ S G+ P+ VT+N LI G+ KV N+  A  + + M    
Sbjct: 339 LINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC 398

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT++ LID + R     +  ++   M+   L P+VYT+++L++ LC    + +A 
Sbjct: 399 IAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEAS 458

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +  K L    L P   +YN +I G+CK G+   A  ++ EM +    P+  +F   I   
Sbjct: 459 KLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLL 518

Query: 518 CMKGRMVEAISIFNKMLRIGCAPD 541
           C   +  EA  +  +M+  G  P 
Sbjct: 519 CRDEKWKEAELLLGQMINSGLKPS 542



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 189/386 (48%), Gaps = 14/386 (3%)

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           +P+ +  V++ + +   D A   L      G V +S   +N+LL  L++ N  D+A ++F
Sbjct: 89  TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSN-TFNNLLCLLIRSNYFDKAWWIF 147

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
            E  +     D ++F I+I+G    G   K F     +  FG SP++V Y TLI G C+ 
Sbjct: 148 NE-LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKD 206

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             V     L  ++  +    P+  TY+ +++G+ K G   +   +Y  M   GI P+A  
Sbjct: 207 GNVMLAKNLFCKMN-RLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYA 265

Query: 370 FNVLI-----DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           +N LI     DG       V AE MRE+ ++ G    V+T++ LI G CR  +  + +KL
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAE-MREKGIACG----VMTYNILIGGLCRGKKFGEAVKL 320

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             ++    LSPN+ T+ ILIN  C   +++ A R   QLK + L P    YN +I G+ K
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
             N+  A  +V EMEE+   P KVT+TILI          +A  + + M + G  PD  T
Sbjct: 381 VENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYT 440

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASE 570
            + L+  L   G   EA ++ +   E
Sbjct: 441 YSVLLHGLCVHGNMKEASKLFKSLGE 466



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 202/404 (50%), Gaps = 2/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++  L      D    +F+ ++S   L ++      +  C  AG       LL+  
Sbjct: 126 TFNNLLCLLIRSNYFDKAWWIFNELKSKVVL-DAYSFGIMIKGCCEAGYFVKGFRLLAML 184

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +  +Y +L++   K  N   A  +F +  RL   P+  T+++L+ G  + G  
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQ 244

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++ F+ + +M   G  P+   YN LIS  C    V +  ++  E++ K   +  V+TY  
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG-IACGVMTYNI 303

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C+  K  +A  + +++N  G+ P+ VT+N+LI+GF  V  M SA  +  ++ S G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSG 363

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P +VT+++LI GY +   L   L L  EM+ + ++P+  T+TILI+A  + N    A 
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKAC 423

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                ++ + LVP  + Y+ ++ G C  GN+ EA+ +   + E   +P+ V +  +I G+
Sbjct: 424 EMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGY 483

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C +G    A+ + N+M++ G  P+  +  S I  L +     EA
Sbjct: 484 CKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEA 527



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 161/321 (50%), Gaps = 1/321 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+++M    + GL      +++ M+  G +PN+      +S     G  D A  + ++ 
Sbjct: 230 TYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEM 289

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +      YN L+  L +     EAV +  +  ++   P+  T+NILI G   + ++
Sbjct: 290 REKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKM 349

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  + S G SP +VTYNTLI+G  +V  +A   +L+KE++ +   +P  VTYT 
Sbjct: 350 DSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC-IAPSKVTYTI 408

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  + +L   +KA  +++ M   G+ P   T++VL+ G    GNM  A  + + +    
Sbjct: 409 LIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMH 468

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V ++++I GYC+ G   + L+L +EM    + PNV +F   I  LC++ +  +A 
Sbjct: 469 LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAE 528

Query: 458 RFLKQLKWNDLVPKPFMYNPV 478
             L Q+  + L P   +Y  V
Sbjct: 529 LLLGQMINSGLKPSVSLYKMV 549


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 186/391 (47%), Gaps = 24/391 (6%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           + G+ D ++          +  S F YN +++ L K+ + + A  +F +       PD  
Sbjct: 33  KVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIV 92

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+N LI G  ++G + +    F  M    C PD++TYN LI+  C+   + +  E L E+
Sbjct: 93  TYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEM 152

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           K      P+VVTY++ I  +CK G + +A   + +M    + P+  T+  LID   K GN
Sbjct: 153 KANG-LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 211

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  + E +L  G   +VVT+++L+DG C  G++ +  ++   M    ++PN  T+T 
Sbjct: 212 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA 271

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           L++   K   +  A+  LK++K   + P   +Y  ++ G C    ++EA +++ E++E  
Sbjct: 272 LVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 331

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAIS-----------------------IFNKMLRIGCA 539
              + V +T L+  +   G+  EA++                       +F++ML  G  
Sbjct: 332 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMM 391

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           PD I   +LI   +K G   EA  +  R  E
Sbjct: 392 PDKIAYTALIDGNMKHGNLQEALNLRDRMIE 422



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 178/338 (52%), Gaps = 1/338 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+LL+ L K    D +   FK+      +   +T+NI+I  L + G+++ A   F  M  
Sbjct: 25  NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKE 84

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G +PDIVTYN+LI G  ++  +     + +++K  ++  PDV+TY ++I+ +CK  +M 
Sbjct: 85  AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK-DADCDPDVITYNALINCFCKFERMP 143

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           KA    +EM + G+KP+ VT++  ID F K G +  A      M      P+  T++SLI
Sbjct: 144 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLI 203

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           D  C+ G L + LKL +E+    +  NV T+T L++ LC+E R+ +A    + +    + 
Sbjct: 204 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 263

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  ++ GF KA  ++ A  I+ EM+EK  KPD + +  ++ G C + R+ EA  +
Sbjct: 264 PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLL 323

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             ++   G   + +   +L+    K G   EA  +++ 
Sbjct: 324 IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 204/428 (47%), Gaps = 24/428 (5%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++ N ++  L ++G  D  +  F  M + G   +       +    + G  + A+ L +Q
Sbjct: 22  RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQ 81

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +    T     YNSL++   K    DE + +F++       PD  T+N LI    +   
Sbjct: 82  MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 141

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + KAFEF ++M + G  P++VTY+T I   C+   +    +   +++ +   +P+  TYT
Sbjct: 142 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR-RVALTPNEFTYT 200

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S+I   CK G + +A  +  E+   GIK + VT+  L+DG  + G M  AE +   ML+ 
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 260

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+  T+++L+ G+ +  ++     +  EMK K + P++  +  ++  LC E+RL +A
Sbjct: 261 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 320

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA-------------------- 496
           +  + ++K + +     +Y  ++D + K+G   EA  ++                     
Sbjct: 321 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKK 380

Query: 497 ---EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
              EM +K   PDK+ +T LI G+   G + EA+++ ++M+ IG   D     +LI  L 
Sbjct: 381 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 440

Query: 554 KGGMPNEA 561
             G   +A
Sbjct: 441 HSGQVQKA 448



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 156/318 (49%), Gaps = 38/318 (11%)

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
           FR++ +P +   N L+  LS++G    + +FF DMG+ G    + TYN +I  L      
Sbjct: 15  FRVFPKPRSC--NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYL------ 66

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
                                         CK G ++ A  ++ +M   G  P  VT+N 
Sbjct: 67  ------------------------------CKEGDLEMARSLFTQMKEAGFTPDIVTYNS 96

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           LIDG GK+G +     + E+M      PDV+T+++LI+ +C+  ++ +  +   EMK   
Sbjct: 97  LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 156

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L PNV T++  I+A CKE  L +A +F   ++   L P  F Y  +ID  CKAGN+ EA 
Sbjct: 157 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 216

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +V E+ +   K + VT+T L+ G C +GRM EA  +F  ML  G AP+  T  +L+   
Sbjct: 217 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 276

Query: 553 LKGGMPNEAFRIMQRASE 570
           +K      A  I++   E
Sbjct: 277 IKAKEMEYAKDILKEMKE 294



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 13/380 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+             M+++G  PN      F+ +  + G    A       
Sbjct: 128 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 187

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +T + F Y SL++A  K  N  EA+ + +E  +   + +  T+  L+ GL   G +
Sbjct: 188 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 247

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E F  M + G +P+  TY  L+ G  +  E+    ++LKE+K K    PD++ Y +
Sbjct: 248 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC-IKPDLLLYGT 306

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G C   ++++A  +  E+   GI  +AV +  L+D + K G    A  + E ML   
Sbjct: 307 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD-- 364

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
                     L+DG C+N       KL DEM  K + P+   +T LI+   K   L +A 
Sbjct: 365 ----------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 414

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++    +      Y  +I G   +G V +A  ++ EM  K   PD+V +  LI  +
Sbjct: 415 NLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 474

Query: 518 CMKGRMVEAISIFNKMLRIG 537
              G++ EA+ + N+M + G
Sbjct: 475 YALGKVDEALELQNEMAKRG 494



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 26/344 (7%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           PK   +FL   + N  L  +  TY+  + + C+ G+       F  MR     PN     
Sbjct: 143 PK-AFEFLHEMKAN-GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 200

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             + +  +AG    A  L+ +     + ++   Y +LL+ L ++    EA  +F+     
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 260

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P+  T+  L+ G  +  E++ A +   +M      PD++ Y T++ GLC  + +   
Sbjct: 261 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 320

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM---------NSC----- 361
             L+ E+K +S  + + V YT+++  Y K G+  +A  +  EM         N+C     
Sbjct: 321 KLLIGEIK-ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAK 379

Query: 362 ---------GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
                    G+ P  + +  LIDG  K GN+  A  +R+RM+  G   D+  +++LI G 
Sbjct: 380 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 439

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             +GQ+ +   L DEM GK + P+   +  LI       ++++A
Sbjct: 440 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEA 483



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 13/276 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  LCE G     + VF  M + G  PN       V   I+A + + AK +L + 
Sbjct: 233 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 292

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +     +Y ++L  L  ++  +EA  +  E        +   +  L+    + G+ 
Sbjct: 293 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A     +M              L+ GLC+ N      +L  E+  K    PD + YT+
Sbjct: 353 TEALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKG-MMPDKIAYTA 399

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G  K G + +A  + + M   G++     +  LI G    G +  A  + + M+  G
Sbjct: 400 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG 459

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
            LPD V +  LI  Y   G++++ L+L +EM  + +
Sbjct: 460 VLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 227/469 (48%), Gaps = 6/469 (1%)

Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFS-RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
           ++L P   + +I+R  N  L L+   ++ + + +  H++ TY+ ++  L      + V+ 
Sbjct: 48  QRLFPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVES 107

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +   ++  G   +  +    + S   A +   A     + +   V  S    N+LLNALV
Sbjct: 108 LLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALV 167

Query: 238 KQNNADEAVYMFKEYFR--LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
            QNN   +V++  +Y +      P+ +T NILI+ L +  +V+ A + F +M S G  P+
Sbjct: 168 -QNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPN 226

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +VTY T++ G     ++     +  E+ F   + PD  TYT ++ GY K G+   A  + 
Sbjct: 227 VVTYTTILGGYVSRGDMIGAKRVFGEL-FDHGWLPDATTYTILMDGYVKQGRFTDAVKVM 285

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           +EM   G++P+ +T+ V+I G+ K      A  +   ML   Y+P+      +ID  C  
Sbjct: 286 DEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGE 345

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G++ +  K+ +++  KN +P+    + LI+ LCKE  + +AR+   + +    +     Y
Sbjct: 346 GRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFE-RGTISSLLTY 404

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I G C+ G + EA  +  +M EK C P++ T+ +LI G    G+  E I +  +ML 
Sbjct: 405 NTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLD 464

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVP 584
            GC  ++ T   L+  LLK G   E   I+        +   +W   VP
Sbjct: 465 KGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAVDFKAWNLFVP 513


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 221/499 (44%), Gaps = 38/499 (7%)

Query: 109 LSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE 168
           L D     + + L+P   ++V+    + +  L+F +++      +H+   Y  ++  L  
Sbjct: 169 LQDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGR 228

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG----------------------- 205
             +   +Q +   M++ G      M+  FV S  R+G                       
Sbjct: 229 AKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLID 288

Query: 206 --------------KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                         K D A+ L +Q     V+ +   Y S++     +   ++A+ +  +
Sbjct: 289 TAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDD 348

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
             +    PD  T+ I+I  L +   +++A+     M   GC P+I TYN LI GLC V  
Sbjct: 349 MIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRR 408

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
                EL+  ++ +    P++ TYT +  G CKL ++D+A  ++NE  + G+KP+ VT+N
Sbjct: 409 PEEALELVTLME-QGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYN 467

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
            L++G+ +   ++ A  + + M      PD VT+++LI G  +  QL   L++ DEM+ K
Sbjct: 468 TLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENK 527

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
               N  T  IL   L +     DA  F +++K          Y   I     AG ++EA
Sbjct: 528 GYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEA 587

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             ++ EM  K   P+  T+  +I G C +GR+ +A ++ N M+  G  PD  + N LI  
Sbjct: 588 QALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKE 647

Query: 552 LLKGGMPNEAFRIMQRASE 570
               G   +A ++   A E
Sbjct: 648 FHNQGRTQDADQLYATALE 666



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 175/384 (45%), Gaps = 11/384 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDG----HLPNSPMIE-FFVSSCIRAGKCDAAKGL 213
           YN V+ SL +    D  + +F  M ++G    +L  + MI+ FF+       K + A  L
Sbjct: 291 YNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKE-----KMEDAMKL 345

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L              Y  +++AL K+   ++A  + ++      +P+ +T+N LIQGL  
Sbjct: 346 LDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCA 405

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +   ++A E    M   G  P+I TY  L  GLC++  + R  E+  E   +    P+ V
Sbjct: 406 VRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARG-LKPNRV 464

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++++GYC+  ++ +A  I  EM+     P  VT+  LI G  +   +  A  M + M
Sbjct: 465 TYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEM 524

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + GY  +  T + L  G  R G           MK +  + +   + + I+ L     +
Sbjct: 525 ENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEM 584

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A+  L ++      P    YN +I GFC+ G +D+A+ ++  M E    PD  ++ IL
Sbjct: 585 EEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNIL 644

Query: 514 IIGHCMKGRMVEAISIFNKMLRIG 537
           I     +GR  +A  ++   L  G
Sbjct: 645 IKEFHNQGRTQDADQLYATALERG 668



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 144/322 (44%), Gaps = 3/322 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +V+ +LC+  + +    V   MR +G  PN       +       + + A  L++  
Sbjct: 360 TYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLM 419

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G V  + + Y  L + L K    D A  MF E      +P+  T+N L+ G  R   +
Sbjct: 420 EQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRL 479

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M    C+PD VTY TLI GL + N++     +  E++ K  +  +  T   
Sbjct: 480 IEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG-YDVNFDTLNI 538

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +  G  ++G    A+  Y  M   G   SA  + + I      G M  A+ +   M++ G
Sbjct: 539 LARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKG 598

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y P++ T++++I G+CR G+L+    + + M    + P+  ++ ILI     + R  DA 
Sbjct: 599 YSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDAD 658

Query: 458 RFLKQLKWNDLV--PKPFMYNP 477
           +         +V  PKP +  P
Sbjct: 659 QLYATALERGVVLNPKPVIQEP 680



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 153/310 (49%), Gaps = 4/310 (1%)

Query: 265 NILIQGLSRIGEVKKAFEFF-YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           + +++ L+   + + A  FF +     G   +   Y T+I  L R         LL++++
Sbjct: 184 DAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQ 243

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV--TFNVLIDGFGKVG 381
            +       + ++ V+S Y + G+  ++   +N M   G +P  +   +N ++    K  
Sbjct: 244 TQGREITRSMLHSFVMS-YGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNK 302

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  AE +  +M++ G   + +T++S+I  +    ++   +KL D+M   N +P+V T+T
Sbjct: 303 KLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYT 362

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           I+I+ALCK   +  A   L++++ N   P  + YN +I G C     +EA  +V  ME+ 
Sbjct: 363 IVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQG 422

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              P+  T+TIL  G C   R+  A  +FN+ L  G  P+ +T N+L++   +G    EA
Sbjct: 423 GVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEA 482

Query: 562 FRIMQRASED 571
             I++   ++
Sbjct: 483 MDILKEMHQN 492


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 201/409 (49%), Gaps = 12/409 (2%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA-GK 206
           V+  +  +  TYNL+ ++LC+ G  +  + + D M   G   +  +    V+  +R  G+
Sbjct: 348 VSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGR 407

Query: 207 CDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            D    L+ +      +P +  M+     + +  L K+   +EA  ++          + 
Sbjct: 408 LDVVLRLIREMVARFLKPNDAVMT-----ACIQELCKRGKHEEAAEIWFLVLGKGLGVNI 462

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
            T N LI GL +   +K+A +    M   G   D +TYN +I   C+ +++    +L ++
Sbjct: 463 ATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL-RD 521

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
              K  F PD+ T+ + +  YC LGK++    + ++M S G+KP  VT+  +IDG+ K  
Sbjct: 522 DMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 581

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
           ++  A      ++  G  P+ V +++LI GY RNG ++  + + D MK   + P   T+ 
Sbjct: 582 DVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYN 641

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+  +C    + +A+    Q    ++      Y  +I GFCK G +DEA +   EM  +
Sbjct: 642 SLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYR 701

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             +P+K+T+T L+  +C  G   EA  +F++M+  G  PD ++ N+LIS
Sbjct: 702 DIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLIS 750



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 3/373 (0%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG-EVTMSTFMYNSLLNALV 237
           F  + + G  P+       V +    G+ D A+ +  + R G  V    + Y  ++ AL 
Sbjct: 168 FLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALC 227

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           +    D A  M  E  R   QP   T+N+L+  L R G V++AF+    M      P IV
Sbjct: 228 RAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIV 287

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T+  LI+GL R         +L+E++     +P+ V Y  +I  +C+ G   +A  +++E
Sbjct: 288 TFGILINGLARGQRFGEVDAVLQEME-GFGITPNEVIYNQLIGWHCREGHCSEALRLFDE 346

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR-NG 416
           M S GIK + VT+N++     K G M  AE + + ML  G       F+S++  + R  G
Sbjct: 347 MVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTG 406

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           +L+  L+L  EM  + L PN    T  I  LCK  +  +A      +    L       N
Sbjct: 407 RLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSN 466

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I G C+  N+ EA  ++  M +   + D++T+ I+I   C   +M EAI + + M++ 
Sbjct: 467 ALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKR 526

Query: 537 GCAPDDITVNSLI 549
           G  PD  T N+ +
Sbjct: 527 GFKPDLFTFNTFL 539



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 160/336 (47%), Gaps = 1/336 (0%)

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           ++ LC+ G H+    ++  +   G   N       +    +      A  +L       V
Sbjct: 434 IQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGV 493

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
                 YN ++    K +  +EA+ +  +  +   +PD +TFN  ++    +G+V+    
Sbjct: 494 EFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILH 553

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
               M S G  PDIVTY T+I G C+  +V + ++ L E+  K+   P+ V Y ++I GY
Sbjct: 554 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIEL-IKNGLRPNAVIYNALIGGY 612

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            + G +  A G+ + M   GI+P+ +T+N L+      G +  A+ +  + +       V
Sbjct: 613 GRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGV 672

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           + ++ +I G+C+ G++++ +    EM  +++ PN  T+T L+ A CK     +A +   +
Sbjct: 673 IGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDE 732

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           +  + +VP    YN +I G C+  ++D+     AEM
Sbjct: 733 MVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 207/468 (44%), Gaps = 54/468 (11%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVS 199
           FLE S    S   S KT N+++ +L   G  D  + VF  MR DG+   P+       + 
Sbjct: 168 FLELSTRGAS--PSIKTCNILVEALGCGGQLDLARKVFGEMR-DGNAVAPDVYTYTVMIK 224

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
           +  RAG+ DAA  +L++     +  +   YN L++AL +    +EA  +         +P
Sbjct: 225 ALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRP 284

Query: 260 DTWTFNILIQGLSR---IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
              TF ILI GL+R    GEV    +   +M  FG +P+ V YN LI   CR    +   
Sbjct: 285 SIVTFGILINGLARGQRFGEVDAVLQ---EMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID- 375
            L  E+  K      VVTY  +    CK G+M+ A  I +EM   G+      FN ++  
Sbjct: 342 RLFDEMVSKG-IKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAW 400

Query: 376 ---GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
              G G++   V    +RE +  F   P+    ++ I   C+ G+  +  ++   + GK 
Sbjct: 401 HLRGTGRLD--VVLRLIREMVARF-LKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLK----------QLKWNDLV------------- 469
           L  N+ T   LI+ LC+ N + +A + LK          ++ +N ++             
Sbjct: 458 LGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAI 517

Query: 470 ------------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                       P  F +N  +  +C  G V++   ++ +M+ +  KPD VT+  +I G+
Sbjct: 518 QLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGY 577

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C    + +A     ++++ G  P+ +  N+LI    + G  ++A  ++
Sbjct: 578 CKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVL 625



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 151/328 (46%), Gaps = 36/328 (10%)

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +  A + F ++ + G SP I T N L+  L    ++    ++  E++  +  +PDV T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT +I   C+ G++D A  +  E+   GI+P+ VT+NVL+D   + G +  A  ++ RM+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 395 SFGYLPDVVTFSSLIDG-----------------------------------YCRNGQLN 419
                P +VTF  LI+G                                   +CR G  +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           + L+L DEM  K +   V T+ ++  ALCKE  +  A + L ++    +     ++N V+
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 480 DGFCKA-GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
               +  G +D    ++ EM  +  KP+    T  I   C +G+  EA  I+  +L  G 
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQ 566
             +  T N+LI  L +G    EA ++++
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLK 486



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 10/286 (3%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           +EF R+         TYN++++  C+    +    + D M   G  P+      F+ +  
Sbjct: 493 VEFDRI---------TYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYC 543

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
             GK +    LL Q +   +      Y ++++   K  +  +A     E  +   +P+  
Sbjct: 544 NLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAV 603

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            +N LI G  R G +  A      M   G  P  +TYN+L+  +C    V    E+  + 
Sbjct: 604 IYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQC 663

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K+     V+ YT +I G+CK+GK+D+A   + EM+   I+P+ +T+  L+  + K GN
Sbjct: 664 ILKN-IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGN 722

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
              A  + + M+S G +PD V++++LI G C    L++ ++   EM
Sbjct: 723 KEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 3/204 (1%)

Query: 158 TYNLVMRSLCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++   C+   +H + + + + ++ +G  PN+ +    +    R G    A G+L  
Sbjct: 569 TYGTIIDGYCKAKDVHKANKYLIELIK-NGLRPNAVIYNALIGGYGRNGSISDAIGVLDT 627

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +  +   YNSL+  +      +EA  +F +      +     + I+IQG  +IG+
Sbjct: 628 MKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGK 687

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A  +F +M      P+ +TY TL+   C+        +L  E+   S   PD V+Y 
Sbjct: 688 IDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEM-VSSGIVPDTVSYN 746

Query: 337 SVISGYCKLGKMDKATGIYNEMNS 360
           ++ISG C++  +DK      EM+S
Sbjct: 747 TLISGCCEVDSLDKIVESPAEMSS 770


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 222/493 (45%), Gaps = 83/493 (16%)

Query: 158 TYNLVMRSLC-----EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           TY +VM   C     E+GL    +++   +++D    N+         C      DA K 
Sbjct: 10  TYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANT----VLKCLCCTKRTDDAVKV 65

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQG 270
           LL +          F Y  +L  L   N + +A+ + +   +      PD  T+N +I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
             + G++ KA   +++M   G  PD+VT+N++I+ LC+   V     LL+++   +   P
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQM-VDNGVPP 184

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           + VTYTS+I GY  LG+ ++AT ++ EM   G+ P  V++N  +D   K G    A  + 
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 391 ERMLSFGYLPDVVT-----------------------------------FSSLIDGYCRN 415
             M + G+ P++VT                                   F+ LID Y + 
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G +++ + +  EM+G+ LSP+V+T++ LI+ALC+  RL DA     Q+    + P   +Y
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364

Query: 476 NPVIDGFCKAGNVDEANVIVAEM---------------------EEKRC----------- 503
           + +I GFC  G++ +A  +V EM                     +E R            
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424

Query: 504 ----KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
               + D + F  LI G+C+ G M +A S+ + M+  G  PD  T N+L++   K G  +
Sbjct: 425 DIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484

Query: 560 EAFRIMQRASEDQ 572
           +   + +  S+ +
Sbjct: 485 DGLNLFREMSDKK 497



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 188/404 (46%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N  M SLC+ G       +F  M + GH PN       +      G         +  
Sbjct: 223 SWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTM 282

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  +  ++  L++A  K+   DEA+ +  E       PD +T++ LI  L R+G +
Sbjct: 283 KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRL 342

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  M   G  P+ V Y++LI G C   ++ +  EL+ E+       P++  + S
Sbjct: 343 ADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNS 402

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK G++  A  I++ +   G +   + FN LIDG+  VG M  A  + + M+S G
Sbjct: 403 IVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAG 462

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD  T+++L++GY ++G+++ GL L  EM  K + P   T+ I+++ L +  R   A+
Sbjct: 463 IGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQ 522

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L ++           YN ++ G C+    DEA V+  ++     K +  T   +I   
Sbjct: 523 KMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSM 582

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               R  EA  +F+ +   G  P+  T   +I  LLK G   EA
Sbjct: 583 YTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEA 626



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 189/412 (45%), Gaps = 37/412 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++      G    +   F+ M+ DG + N  +    + +  + G  D A  +LS+ 
Sbjct: 258 TYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEM 317

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   ++   F Y++L++AL +     +AV  F +      QP+T  ++ LIQG    G++
Sbjct: 318 QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDL 377

Query: 278 KKAFEFFYDM------------------------------------GSFGCSPDIVTYNT 301
            KA E  Y+M                                       G   DI+ +NT
Sbjct: 378 VKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNT 437

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           LI G C V E+ +   +L +    +   PD  TY ++++GY K G++D    ++ EM+  
Sbjct: 438 LIDGYCLVGEMGKAFSVL-DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
            IKP+ VT+N+++DG  + G  V+A+ M   M+  G    + T++ ++ G CRN   ++ 
Sbjct: 497 KIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
           + +  ++   N+  N+ T   +IN++    R  +A+     +  + LVP    Y  +I  
Sbjct: 557 IVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRN 616

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
             K G+V+EA+ + + ME+  C P        I     KG +V+A +  +K+
Sbjct: 617 LLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 196/446 (43%), Gaps = 37/446 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+    + G       ++  M   G +P+       +++  +A   D A+ LL Q 
Sbjct: 118 TYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQM 177

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y S+++        +EA  MF+E       PD  ++N  +  L + G  
Sbjct: 178 VDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS 237

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A E FY M + G  P+IVTY  L+ G       A        +K       + + +T 
Sbjct: 238 KEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMK-GDGIVANCLVFTI 296

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y K G MD+A  I +EM   G+ P   T++ LI    ++G +  A     +M+  G
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTG 356

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL-SPNVYTFTILINALCKENRLNDA 456
             P+ V + SLI G+C +G L +  +L  EM    +  PN+  F  +++++CKE R+ DA
Sbjct: 357 VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDA 416

Query: 457 RRFLKQLK----------WNDLV-------------------------PKPFMYNPVIDG 481
                 +K          +N L+                         P  F YN +++G
Sbjct: 417 HHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNG 476

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           + K+G +D+   +  EM +K+ KP  VT+ I++ G    GR V A  + ++M+  G    
Sbjct: 477 YFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVS 536

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQR 567
             T N ++  L +    +EA  + Q+
Sbjct: 537 LPTYNIILKGLCRNNCTDEAIVMFQK 562



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 138/309 (44%), Gaps = 2/309 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P  +T+ +++ G  R    +    FF  +   G   D    NT++  LC         ++
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM-NSCGI-KPSAVTFNVLIDG 376
           L     +    PD  +Y  V+   C   +  +A  +   M    G+  P  VT+N +I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G +  A  +   M+  G++PDVVT +S+I+  C+   ++    L  +M    + PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T+T +I+      R  +A +  +++    L+P    +N  +D  CK G   EA  I  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K  +P+ VT+ IL+ G+  +G   + +S FN M   G   + +    LI    K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 557 MPNEAFRIM 565
           M +EA  I+
Sbjct: 306 MMDEAMLIL 314



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 54/126 (42%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN++++ LC     D   V+F  + +     N   +   ++S     + + AK L 
Sbjct: 536 SLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLF 595

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      +  +   Y  ++  L+K+ + +EA  MF    +    P +   N  I+ L   
Sbjct: 596 SAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEK 655

Query: 275 GEVKKA 280
           GE+ KA
Sbjct: 656 GEIVKA 661


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 193/404 (47%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N  + SLC+ G        FD M + GH P+       +      G      GL +  
Sbjct: 372 TCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSM 431

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  +  ++  L++A  K+   D+A+ +F E  +    PD  T++ +I   SR+G +
Sbjct: 432 KSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRL 491

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M + G  P+   Y+++I G C    + +  EL+ E+  K    PD+V ++S
Sbjct: 492 TDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSS 551

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+  CK G++  A  I++     G +P  +TFN LIDG+  VG M  A  + + M   G
Sbjct: 552 VINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVG 611

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT+++L+DGY +NG++N GL L  EM+ K + PN  T+ I++  L +  R   AR
Sbjct: 612 VEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +   ++  +       +Y  ++ G C+    DEA ++  ++     K        +I   
Sbjct: 672 KKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               R  EA  +F  +   G  P++ T   +I  LLK G   +A
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDA 775



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 195/411 (47%), Gaps = 2/411 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++ +LC+    D  ++V   M +DG  P++      +      G+   A  +  + 
Sbjct: 302 TYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREM 361

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  +    NS L +L K   + EA   F        +PD +++  L+ G +  G  
Sbjct: 362 KKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCF 421

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                 F  M S G + +   +  LI    +   V     +  E++ +   SPDVVTY++
Sbjct: 422 ADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQ-QQGVSPDVVTYST 480

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VIS + ++G++  A   +N+M + GI+P+   ++ +I GF   G +V A+ +   M++ G
Sbjct: 481 VISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 398 Y-LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              PD+V FSS+I+  C++G++     + D        P V TF  LI+  C   +++ A
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA 600

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L  ++   + P    YN ++DG+ K G +++   +  EM+ K  KP+ VT+ I++ G
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
               GR V A   F++M+  G          ++  L +    +EA  + Q+
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQK 711



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 175/374 (46%), Gaps = 5/374 (1%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV- 246
           +P        +  C RA + D    L        + M     N+LL  L   N  +EAV 
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLIS 304
            +      L   P+  +++I+++ L      ++A +    M   G  CSPD+V Y+T+I 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           G     E  +   L  E+  +    PDVVTY  +I   CK   MDKA  +  +M + G +
Sbjct: 274 GFFNEGETGKACSLFHEMT-RQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P  VT++ +I G+  +G +  A  M   M   G +P++VT +S +   C++G+  +  + 
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            D M  K   P+++++  L++    E    D       +K N +     ++  +I  + K
Sbjct: 393 FDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAK 452

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G VD+A +I  EM+++   PD VT++ +I      GR+ +A+  FN+M+  G  P+   
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 545 VNSLISCL-LKGGM 557
            +S+I    + GG+
Sbjct: 513 YSSIIQGFCMHGGL 526



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 200/442 (45%), Gaps = 39/442 (8%)

Query: 132 RLDNPKLGLKFLE-FSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLP 189
           R   P LGL       R  L ++    T N +++ LC      ++V V+   M   G +P
Sbjct: 169 RARRPDLGLALFGCILRTGLKMDQI--TANTLLKCLCYANRTEEAVNVLLHRMSELGCVP 226

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N+        S +    CD              +MS    + LL  + KQ  A       
Sbjct: 227 NA-----VSYSIVLKALCDN-------------SMSQRALD-LLQMMAKQGGA------- 260

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
                    PD   ++ +I G    GE  KA   F++M   G  PD+VTYN +I  LC+ 
Sbjct: 261 -------CSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKA 313

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
             + +   +L+++       PD VTY+ +I GY  LG++ +A  ++ EM   G+ P+ VT
Sbjct: 314 RAMDKAELVLRQMTTDGA-QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVT 372

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
            N  +    K G    A    + M + G+ PD+ ++ +L+ GY   G     + L + MK
Sbjct: 373 CNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMK 432

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              ++ N + FTILI+A  K   ++DA     +++   + P    Y+ VI  F + G + 
Sbjct: 433 SNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLT 492

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA-PDDITVNSL 548
           +A     +M  +  +P+   ++ +I G CM G +V+A  + ++M+  G   PD +  +S+
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSV 552

Query: 549 ISCLLKGGMPNEAFRIMQRASE 570
           I+ L K G   +A  I   A++
Sbjct: 553 INSLCKDGRVMDAHDIFDLATD 574



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 175/376 (46%), Gaps = 2/376 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           + +++ +  + G+ D   ++F  M+  G  P+       +S+  R G+   A    +Q  
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-RLYSQPDTWTFNILIQGLSRIGEV 277
              +  +T +Y+S++          +A  +  E   +   +PD   F+ +I  L + G V
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F      G  P ++T+N+LI G C V ++ +  ++L  ++      PD+VTY +
Sbjct: 563 MDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVG-VEPDIVTYNT 621

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY K G+++    ++ EM   G+KP+ VT+ +++ G  + G  V+A      M+  G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
               V  +  ++ G CRN   ++ + L  ++   N+  ++     +INA+ K  R  +A+
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  + L+P    Y  +I    K G V++AN + + ME+    P       +I   
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRML 801

Query: 518 CMKGRMVEAISIFNKM 533
             KG + +A +  +K+
Sbjct: 802 LEKGEIAKAGNYLSKV 817



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 3/176 (1%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P   T++ L+D  CR  + + GL L   +    L  +  T   L+  LC  NR  +A  
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 459 -FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK--RCKPDKVTFTILII 515
             L ++     VP    Y+ V+   C       A  ++  M ++   C PD V ++ +I 
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           G   +G   +A S+F++M R G  PD +T N +I  L K    ++A  ++++ + D
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTD 329



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 64/168 (38%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++  L   G   + +  F  M   G      +    +    R    D A  L  + 
Sbjct: 653 TYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  S  + N+++NA+ K    +EA  +F         P+  T+ ++I  L + G V
Sbjct: 713 GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGV 772

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           + A   F  M   G  P     N +I  L    E+A+    L +V  K
Sbjct: 773 EDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGK 820


>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Cucumis sativus]
 gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Cucumis sativus]
          Length = 849

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 221/443 (49%), Gaps = 28/443 (6%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y++++  LC+    +    +F  M+  G  P+  ++   V+S       +    +L   R
Sbjct: 335 YDVLIGGLCKKRAFEKAMALFFKMKMLGITPDVQILAKLVASSPE----ERVVIMLLGER 390

Query: 219 PGEVTMS--TFMYNSLLNALVKQNNADEAVYMFK---------------EYFRLYSQ--P 259
           P ++      F++NS+L  LV     +   Y+ +               +  + + +  P
Sbjct: 391 PKDINDEGMIFLFNSVLKFLVNAGKVESTCYLLQLMMGNESRSDNIHILDIHQTFKKLLP 450

Query: 260 DTWTFNILIQGLSRIG---EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           +T +FNI+I GL +     +   A   F DM   GC  D + YN LI  LC+ + +   +
Sbjct: 451 NTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESY 510

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +LL++++ +S   P   TY S+    C+      A  +  EM   G +P      +L+  
Sbjct: 511 KLLRDME-QSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVKQ 569

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
             K G  + A      M+  G+LPD+V++S+ +DG  +  +L++ L+L  ++  +   P+
Sbjct: 570 LCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPD 629

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           V +  ILI   CK  ++N+A  FL +++   LVP    YN +I+ +CK G++D+A + ++
Sbjct: 630 VVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLS 689

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +M E+  KP  +++T LI G C  GR  +A  ++N+M   GC+P+ IT  +++  L K G
Sbjct: 690 QMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCG 749

Query: 557 MPNEAFRIMQRASEDQNLQLPSW 579
            P+EA  +   + E++ ++  S+
Sbjct: 750 KPDEAL-VYYHSMEEKEMKPDSY 771



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 182/365 (49%), Gaps = 4/365 (1%)

Query: 225 STFMYNSLLNALVKQN---NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +T  +N +++ L+K     + D A+ +F++  +L  + D   +N LI  L +   +K+++
Sbjct: 451 NTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCKSDRLKESY 510

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           +   DM      P   TYN++   LCR  +     ELL+E++      P +   T ++  
Sbjct: 511 KLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRGHGH-EPWIKHSTLLVKQ 569

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            CK G+  +A+    +M   G  P  V+++  +DG  K+  +  A  + + + + G  PD
Sbjct: 570 LCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPD 629

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           VV+ + LI GYC+ G++N+      +M+   L P+  ++ +LIN  CK   ++ A   L 
Sbjct: 630 VVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLS 689

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q+   +  P    Y  +I+G C +G  D+A ++  EM+EK C P+++T+  ++ G C  G
Sbjct: 690 QMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCG 749

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKK 581
           +  EA+  ++ M      PD     +LI   +     + AF I++   E  N+  P+ K 
Sbjct: 750 KPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPDPTDKN 809

Query: 582 AVPLR 586
            V ++
Sbjct: 810 YVTIK 814



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 170/372 (45%), Gaps = 4/372 (1%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK---CDAAKGLLSQFRPGEVTMSTFMY 229
           D++ ++  +      LPN+      +   ++       DAA  L              +Y
Sbjct: 434 DNIHILDIHQTFKKLLPNTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLLY 493

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+L++AL K +   E+  + ++  +   QP  +T+N +   L R  +   A E   +M  
Sbjct: 494 NNLIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRG 553

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G  P I     L+  LC+          L ++  +  F PD+V+Y++ + G  K+ K+D
Sbjct: 554 HGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCEG-FLPDIVSYSAAMDGLVKINKLD 612

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  ++ ++ + G +P  V+ N+LI G+ K G +  A     +M   G +P  V+++ LI
Sbjct: 613 RALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLI 672

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           + +C+NG +++ +    +M  +N  P + ++T LIN  C   R +DA+    +++     
Sbjct: 673 NEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCS 732

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y  ++ G CK G  DEA V    MEEK  KPD      LI     K     A +I
Sbjct: 733 PNRITYMAIVHGLCKCGKPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNI 792

Query: 530 FNKMLRIGCAPD 541
             + +  G  PD
Sbjct: 793 LKETIEKGNIPD 804



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 137/637 (21%), Positives = 249/637 (39%), Gaps = 88/637 (13%)

Query: 12  SKSKESNGYPQRRSNSIDFCGHKSEAAANGVG-LPMTLLFFTVRPS----RVRASTIAAI 66
           S+ K S   PQ ++ +        E   NG+G   +  +FFT        R   +T  AI
Sbjct: 69  SQQKFSLDDPQLKNLAPSLNPRIVETVLNGLGSWKIAHMFFTWASKQHGYRHNCNTFNAI 128

Query: 67  AHF--HGLANGGSRPFDEKEVNYRCSNEFWFVKVV------CTLLLRSSYLSDTCARY-- 116
           A    H   N   R      +N+RCS     + V         L+  ++YL D       
Sbjct: 129 ASILSHARKNAPLRAVAMDVLNFRCSMTPRALGVFLRCLGSVGLVEEANYLFDQVRSMDL 188

Query: 117 ----------LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL 166
                     L E LS  NS++ I+         + +E       ++    T   V+ + 
Sbjct: 189 CIPNNYSYNCLLEILSKTNSIDSIEN--------RLMEMKDFGWEVDKY--TLTPVLMAY 238

Query: 167 CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           C  G  D   +VF+ M   G + +  +      +  + G+ D     + +     + ++ 
Sbjct: 239 CNAGKFDKALIVFNDMHERGWV-DGYVFSILALAFSKWGEVDRTMQFIDRMEDQNLMLNG 297

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
             + +L++  VK++  D A+ + ++  +L    D   +++LI GL +    +KA   F+ 
Sbjct: 298 KTFYALIHGFVKESREDMALKLLEKMLKLGFTLDVSIYDVLIGGLCKKRAFEKAMALFFK 357

Query: 287 MGSFGCSPD---------------------------------IVTYNTLISGL------- 306
           M   G +PD                                 I  +N+++  L       
Sbjct: 358 MKMLGITPDVQILAKLVASSPEERVVIMLLGERPKDINDEGMIFLFNSVLKFLVNAGKVE 417

Query: 307 --CRVNEVARGHE-------LLKEVKFKSEFSPDVVTYTSVISGYCKLGK---MDKATGI 354
             C + ++  G+E       +L   +   +  P+  ++  VI G  K       D A  +
Sbjct: 418 STCYLLQLMMGNESRSDNIHILDIHQTFKKLLPNTASFNIVIHGLLKTTSKLDQDAALSL 477

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
           + +M   G +   + +N LID   K   +  +  +   M      P   T++S+    CR
Sbjct: 478 FEDMVQLGCERDQLLYNNLIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCR 537

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
                  ++L  EM+G    P +   T+L+  LCK  R  +A  FL  +     +P    
Sbjct: 538 REDTVGAIELLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCEGFLPDIVS 597

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+  +DG  K   +D A  +  ++  + C+PD V+  ILI G+C  G++ EA +  +KM 
Sbjct: 598 YSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMR 657

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
             G  P  ++ N LI+   K G  ++A   + + +E+
Sbjct: 658 VAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNEE 694



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 159/393 (40%), Gaps = 61/393 (15%)

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDI 296
           ++N    AV M    FR    P      + ++ L  +G V++A   F  + S   C P+ 
Sbjct: 136 RKNAPLRAVAMDVLNFRCSMTPRA--LGVFLRCLGSVGLVEEANYLFDQVRSMDLCIPNN 193

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            +YN L+  L + N +      L E+K    +  D  T T V+  YC  GK DKA  ++N
Sbjct: 194 YSYNCLLEILSKTNSIDSIENRLMEMK-DFGWEVDKYTLTPVLMAYCNAGKFDKALIVFN 252

Query: 357 EMNSCGIKPSAV----------------------------------TFNVLIDGFGKVGN 382
           +M+  G     V                                  TF  LI GF K   
Sbjct: 253 DMHERGWVDGYVFSILALAFSKWGEVDRTMQFIDRMEDQNLMLNGKTFYALIHGFVKESR 312

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
              A  + E+ML  G+  DV  +  LI G C+     + + L  +MK   ++P+V     
Sbjct: 313 EDMALKLLEKMLKLGFTLDVSIYDVLIGGLCKKRAFEKAMALFFKMKMLGITPDVQILAK 372

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA----------- 491
           L+ A   E R+       +    ND     F++N V+     AG V+             
Sbjct: 373 LV-ASSPEERVVIMLLGERPKDIND-EGMIFLFNSVLKFLVNAGKVESTCYLLQLMMGNE 430

Query: 492 ----NVIVAEMEE--KRCKPDKVTFTILIIGHCMKGRMVE---AISIFNKMLRIGCAPDD 542
               N+ + ++ +  K+  P+  +F I+I G       ++   A+S+F  M+++GC  D 
Sbjct: 431 SRSDNIHILDIHQTFKKLLPNTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQ 490

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
           +  N+LI  L K     E+++++ R  E   LQ
Sbjct: 491 LLYNNLIDALCKSDRLKESYKLL-RDMEQSRLQ 522



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 2/198 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++N++++  C+ G  +        MR  G +P++      ++   + G  D A   LSQ 
Sbjct: 632 SHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQM 691

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y +L+N        D+A  ++ E       P+  T+  ++ GL + G+ 
Sbjct: 692 NEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCGKP 751

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF-SPDVVTYT 336
            +A  +++ M      PD      LI      +  +    +LKE   K     P    Y 
Sbjct: 752 DEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIPDPTDKNYV 811

Query: 337 SVISGYCKLGKMDKATGI 354
           ++     KL K D+ TG+
Sbjct: 812 TIKDAIFKLSK-DEQTGL 828


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 208/462 (45%), Gaps = 72/462 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ SLC+ G+ D    + D MR  G           ++ C +    D A G LS+ 
Sbjct: 374 TYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEM 433

Query: 218 --------------------RPGE---------------VTMSTFMYNSLLNALVKQNNA 242
                               R G+               V  +T+ + +L+N   K    
Sbjct: 434 VEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKM 493

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           DEA  +F +      +P+  TFN +I+G   +G+++KAF+ +  M   G +PD  TY +L
Sbjct: 494 DEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSL 553

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM---- 358
           ISGLC  +  ++  E + +++       +  + T+++ G+C+ G++ +A  ++NEM    
Sbjct: 554 ISGLCLTDGASKAKEFVADLENNCSVL-NKFSLTALLHGFCREGRLTEAYHVWNEMAMWG 612

Query: 359 ----------------------NSC---------GIKPSAVTFNVLIDGFGKVGNMVSAE 387
                                  SC         G++P  V    +I+ + K GNMV A 
Sbjct: 613 GKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQAL 672

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              + M++ G+LP+ VT+++L++  C++  L+    LC EM   +  PN YTF   ++  
Sbjct: 673 NCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYF 732

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
             E  L  A+     +     +      N +I GFCK G + EA  +++   E    PD 
Sbjct: 733 ATEGNLETAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDC 791

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           ++++ +I   C KG + EAI ++N+ML  G  PD +  N LI
Sbjct: 792 ISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILI 833



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 197/411 (47%), Gaps = 24/411 (5%)

Query: 172 HDSVQVVFDYMRS----------DGHLPNSPMI-EFFVSSCIRA----GKCDAAKGLLSQ 216
           H + Q++F  ++           DG L +  ++ E+  ++ IRA       D AKGL+++
Sbjct: 163 HTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVAR 222

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +     +S   YN L+  L K     EAV +           D  T   L+ G  R  E
Sbjct: 223 MQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEE 282

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGL---CRVNEVARGHELLKEVKFKSEFSPDVV 333
           +  A E   DM   G  P     + ++ GL    RV E  R    L E++      P++ 
Sbjct: 283 LDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM----VPNIF 338

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y ++++  CK G   +A  + NEM+  G++P+ VT+ +LI    K G M  A  M +RM
Sbjct: 339 AYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRM 398

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G    V  ++SLI+  C+   L+  +    EM    L+PN  +++ +I  LC++  L
Sbjct: 399 REKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDL 458

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A    +++    +    + +  +I+GFCKA  +DEA+ +  +M E   +P++VTF  +
Sbjct: 459 SGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAV 518

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS--CLLKGGMPNEAF 562
           I G+C+ G + +A  ++++M+  G  PD+ T  SLIS  CL  G    + F
Sbjct: 519 IEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEF 569



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 188/404 (46%), Gaps = 36/404 (8%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G +P+     F +    + G+ + A  L  Q     +  + F YN+LLN + K     EA
Sbjct: 297 GFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEA 356

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             +  E      +P+  T+ ILI  L + G +  A      M   G    +  YN+LI+ 
Sbjct: 357 DRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINC 416

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
            C+ +++      L E+  +   +P+  +Y+ VI+G C+ G +  A  ++ +M   G+  
Sbjct: 417 CCKKDDLDMAMGFLSEM-VEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAW 475

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +  TF  LI+GF K   M  A  +  +M      P+ VTF+++I+GYC  G + +  +L 
Sbjct: 476 NTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLY 535

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D+M  + L+P+ YT+  LI+ LC  +  + A+ F+  L+ N  V   F    ++ GFC+ 
Sbjct: 536 DQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCRE 595

Query: 486 GNVDEAN-----------------------------------VIVAEMEEKRCKPDKVTF 510
           G + EA                                    V+  EM+EK  +PD V  
Sbjct: 596 GRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFH 655

Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           T +I  +  +G MV+A++ +++M+  G  P+ +T  +L++ L K
Sbjct: 656 TCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCK 699



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 163/341 (47%), Gaps = 1/341 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           + +L +LVK      A ++F          D + +   I+    +  +  A      M  
Sbjct: 166 SQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQD 225

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
            G     V YN LI GLC+ N+  R    +K        + D VT  +++ G+C+  ++D
Sbjct: 226 EGDKVSAVPYNVLIYGLCK-NQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELD 284

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  +  +M   G  PS    + ++DG  K G +  A  +  ++     +P++  +++L+
Sbjct: 285 MALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALL 344

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +  C+NG  ++  +L +EM  K L PN  T+ ILI++LCK   ++DA   L +++   + 
Sbjct: 345 NNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVR 404

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
              + YN +I+  CK  ++D A   ++EM E    P+  +++ +I G C KG +  A+ +
Sbjct: 405 MTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVEL 464

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             KM   G A +  T  +LI+   K    +EA R+  + +E
Sbjct: 465 HRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTE 505



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 162/359 (45%), Gaps = 2/359 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N V+   C +G       ++D M   G  P++      +S          AK  ++  
Sbjct: 514 TFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL 573

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++ F   +LL+   ++    EA +++ E      + D  +F I++    +  + 
Sbjct: 574 ENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDS 633

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K+   F +M   G  PD V +  +I+   +   + +      E+       P+ VTYT+
Sbjct: 634 EKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHL-PNTVTYTA 692

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++  CK   +  A  +  EM +    P++ TFN  +D F   GN+ +A+ +   ML  G
Sbjct: 693 LVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-G 751

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +L ++V+ ++LI G+C+ GQ+ + + L          P+  +++ +I+ LCK+  +N+A 
Sbjct: 752 FLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAI 811

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               ++ +  + P    YN +I      G  D+   I  +M +K  +P+  T   L +G
Sbjct: 812 ELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 92/211 (43%)

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
           S GI P   T + ++    K+     A ++ + ML  G L D   +++ I  YC    L+
Sbjct: 155 SAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLD 214

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
               L   M+ +    +   + +LI  LCK  R+ +A      +    +         ++
Sbjct: 215 GAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLV 274

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
            GFC+   +D A  +  +M      P +   + ++ G   KGR+ EA  +  ++  +   
Sbjct: 275 YGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMV 334

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           P+    N+L++ + K GM +EA R++   S+
Sbjct: 335 PNIFAYNALLNNMCKNGMFSEADRLVNEMSD 365


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 249/558 (44%), Gaps = 61/558 (10%)

Query: 56  SRVRASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCAR 115
           ++ R + +     FH L  G SR    +  + RCS           + ++SS  S +  R
Sbjct: 27  AKCRDNLVTGGLKFHALKIG-SRKKHWRRKSMRCS----------VVSMKSSDFSGSMIR 75

Query: 116 YLCEKLSPLNSLEVIKRLDN-PKLGLKFLEFSRV--NLSLNHSFKTYNLVMRSLCEMGLH 172
               K    +S EV + L + P     F  F  V  NL+L H+ +T N ++ +L   G  
Sbjct: 76  K-SSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKL 134

Query: 173 DSVQVVFDYMRS-------------------DGHLPNSP-----MIEF-----------F 197
           + +  VFD M+                     G L  +P     M EF            
Sbjct: 135 EEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGL 194

Query: 198 VSSCIRAGKCDAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           +   +++  C  A     + +L  FRP   T     Y+SL+  L K+ + D  + + KE 
Sbjct: 195 IHLLLKSRFCTEAMEVYRRMILEGFRPSLQT-----YSSLMVGLGKRRDIDSVMGLLKEM 249

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
             L  +P+ +TF I I+ L R G++ +A+E    M   GC PD+VTY  LI  LC   ++
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               E+ +++K      PD VTY +++  +     +D     ++EM   G  P  VTF +
Sbjct: 310 DCAKEVFEKMK-TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L+D   K GN   A    + M   G LP++ T+++LI G  R  +L+  L+L   M+   
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           + P  YT+ + I+   K      A    +++K   + P     N  +    KAG   EA 
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            I   +++    PD VT+ +++  +   G + EAI + ++M+  GC PD I VNSLI+ L
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548

Query: 553 LKGGMPNEAFRIMQRASE 570
            K    +EA+++  R  E
Sbjct: 549 YKADRVDEAWKMFMRMKE 566



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 202/395 (51%), Gaps = 10/395 (2%)

Query: 160  NLVMRSLCEMGLHDSV----QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            +L+   L E G+ ++V    ++V + +  DG     P+I +   SC +      A+ L  
Sbjct: 718  DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY---SC-KHNNVSGARTLFE 773

Query: 216  QF-RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +F +   V      YN L+  L++ +  + A  +F +       PD  T+N L+    + 
Sbjct: 774  KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS 833

Query: 275  GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            G++ + FE + +M +  C  + +T+N +ISGL +   V    +L  ++    +FSP   T
Sbjct: 834  GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893

Query: 335  YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            Y  +I G  K G++ +A  ++  M   G +P+   +N+LI+GFGK G   +A  + +RM+
Sbjct: 894  YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953

Query: 395  SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
              G  PD+ T+S L+D  C  G++++GL    E+K   L+P+V  + ++IN L K +RL 
Sbjct: 954  KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013

Query: 455  DARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A     ++K +  + P  + YN +I     AG V+EA  I  E++    +P+  TF  L
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073

Query: 514  IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            I G+ + G+   A +++  M+  G +P+  T   L
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 176/332 (53%), Gaps = 4/332 (1%)

Query: 238  KQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K NN   A  +F+++ + L  QP   T+N+LI GL     ++ A + F  + S GC PD+
Sbjct: 761  KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820

Query: 297  VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
             TYN L+    +  ++    EL KE+    E   + +T+  VISG  K G +D A  +Y 
Sbjct: 821  ATYNFLLDAYGKSGKIDELFELYKEMS-THECEANTITHNIVISGLVKAGNVDDALDLYY 879

Query: 357  E-MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            + M+     P+A T+  LIDG  K G +  A+ + E ML +G  P+   ++ LI+G+ + 
Sbjct: 880  DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939

Query: 416  GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            G+ +    L   M  + + P++ T+++L++ LC   R+++   + K+LK + L P    Y
Sbjct: 940  GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999

Query: 476  NPVIDGFCKAGNVDEANVIVAEMEEKR-CKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
            N +I+G  K+  ++EA V+  EM+  R   PD  T+  LI+   + G + EA  I+N++ 
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059

Query: 535  RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            R G  P+  T N+LI      G P  A+ + Q
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 181/397 (45%), Gaps = 5/397 (1%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           DSV+  +  M  DGH+P+       V +  +AG    A   L   R   +  +   YN+L
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           +  L++ +  D+A+ +F     L  +P  +T+ + I    + G+   A E F  M + G 
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           +P+IV  N  +  L +        ++   +K      PD VTY  ++  Y K+G++D+A 
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLK-DIGLVPDSVTYNMMMKCYSKVGEIDEAI 523

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            + +EM   G +P  +  N LI+   K   +  A  M  RM      P VVT+++L+ G 
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            +NG++ + ++L + M  K   PN  TF  L + LCK + +  A + L ++     VP  
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           F YN +I G  K G V EA     +M +K   PD VT   L+ G      + +A  I   
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITN 702

Query: 533 MLRIGCA--PDDITVNSLISCLLKGGMPNEAFRIMQR 567
            L   CA  P ++    LI  +L     + A    +R
Sbjct: 703 FL-YNCADQPANLFWEDLIGSILAEAGIDNAVSFSER 738



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 205/486 (42%), Gaps = 74/486 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++M+   ++G  D    +   M  +G  P+  ++   +++  +A + D A  +  + 
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMF---------------------------- 249
           +  ++  +   YN+LL  L K     EA+ +F                            
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624

Query: 250 ----KEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
               K  F++      PD +T+N +I GL + G+VK+A  FF+ M      PD VT  TL
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTL 683

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT---------G 353
           + G+ + + +   ++++    +     P  + +  +I        +D A          G
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANG 743

Query: 354 IYNEMNSC----------------------------GIKPSAVTFNVLIDGFGKVGNMVS 385
           I  + +S                             G++P   T+N+LI G  +   +  
Sbjct: 744 ICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEI 803

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A+ +  ++ S G +PDV T++ L+D Y ++G++++  +L  EM       N  T  I+I+
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863

Query: 446 ALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
            L K   ++DA      L  + D  P    Y P+IDG  K+G + EA  +   M +  C+
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P+   + ILI G    G    A ++F +M++ G  PD  T + L+ CL   G  +E    
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983

Query: 565 MQRASE 570
            +   E
Sbjct: 984 FKELKE 989



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 155/341 (45%), Gaps = 39/341 (11%)

Query: 142  FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
            F +F++ +L +     TYNL++  L E  + +  Q VF  ++S G +P+     F + + 
Sbjct: 772  FEKFTK-DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830

Query: 202  IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF-------- 253
             ++GK D    L  +    E   +T  +N +++ LVK  N D+A+ ++ +          
Sbjct: 831  GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890

Query: 254  ---------------RLYS-------------QPDTWTFNILIQGLSRIGEVKKAFEFFY 285
                           RLY              +P+   +NILI G  + GE   A   F 
Sbjct: 891  ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950

Query: 286  DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
             M   G  PD+ TY+ L+  LC V  V  G    KE+K +S  +PDVV Y  +I+G  K 
Sbjct: 951  RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK-ESGLNPDVVCYNLIINGLGKS 1009

Query: 346  GKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
             ++++A  ++NEM  S GI P   T+N LI   G  G +  A  +   +   G  P+V T
Sbjct: 1010 HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069

Query: 405  FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
            F++LI GY  +G+      +   M     SPN  T+  L N
Sbjct: 1070 FNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 126/537 (23%), Positives = 227/537 (42%), Gaps = 54/537 (10%)

Query: 69   FHGLANGGSRPFDEKEVNY----RCSNEFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPL 124
            F+GL + G  P     V Y    +C ++   +     LL  S  + + C   +    S +
Sbjct: 491  FYGLKDIGLVP---DSVTYNMMMKCYSKVGEIDEAIKLL--SEMMENGCEPDVIVVNSLI 545

Query: 125  NSLEVIKRLDNP-KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
            N+L    R+D   K+ ++  E     + L  +  TYN ++  L + G       +F+ M 
Sbjct: 546  NTLYKADRVDEAWKMFMRMKE-----MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600

Query: 184  SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
              G  PN+           +  +   A  +L +          F YN+++  LVK     
Sbjct: 601  QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 660

Query: 244  EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE----FFYD------------- 286
            EA+  F +  +L   PD  T   L+ G+ +   ++ A++    F Y+             
Sbjct: 661  EAMCFFHQMKKLV-YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719

Query: 287  MGSFGCSPDI---VTYNT--LISGLCR---------------VNEVARGHELLKEVKFKS 326
            +GS      I   V+++   + +G+CR                N V+    L ++     
Sbjct: 720  IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779

Query: 327  EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
               P + TY  +I G  +   ++ A  ++ ++ S G  P   T+N L+D +GK G +   
Sbjct: 780  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839

Query: 387  EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC-DEMKGKNLSPNVYTFTILIN 445
              + + M +     + +T + +I G  + G ++  L L  D M  ++ SP   T+  LI+
Sbjct: 840  FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899

Query: 446  ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             L K  RL +A++  + +      P   +YN +I+GF KAG  D A  +   M ++  +P
Sbjct: 900  GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959

Query: 506  DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            D  T+++L+   CM GR+ E +  F ++   G  PD +  N +I+ L K     EA 
Sbjct: 960  DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 187/442 (42%), Gaps = 42/442 (9%)

Query: 173 DSVQVV--FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           DSV  +  F+ M++ G  PN       + S  +AG+   AK +    +   +   +  YN
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            ++    K    DEA+ +  E      +PD    N LI  L +   V +A++ F  M   
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
              P +VTYNTL++GL +  ++    EL  E   +    P+ +T+ ++    CK  ++  
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELF-EGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  +  +M   G  P   T+N +I G  K G +  A     +M    Y PD VT  +L+ 
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLP 685

Query: 411 GYCRNGQLNQGLKLC----------------DEMKGKNLSP----NVYTF---------- 440
           G  +   +    K+                 +++ G  L+     N  +F          
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745

Query: 441 ----TILINAL---CKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEAN 492
               +IL+  +   CK N ++ AR   ++   +  + PK   YN +I G  +A  ++ A 
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 805

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
            +  +++   C PD  T+  L+  +   G++ E   ++ +M    C  + IT N +IS L
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865

Query: 553 LKGGMPNEAFRIMQRASEDQNL 574
           +K G  ++A  +      D++ 
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDF 887


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 206/401 (51%), Gaps = 4/401 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           LS+N    +Y ++ R +   G   ++++V   +  +  + +S +    V  C   G  +A
Sbjct: 426 LSVNMDVCSY-VIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEA 484

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            +          +  +T   N+LL+ L ++ N +E   + K+        D  ++N LI 
Sbjct: 485 IELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIF 544

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  + G++++AF+   +M      PD  TYN L+ GL  + ++   H LL E K +  F 
Sbjct: 545 GCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK-EYGFV 603

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P+V TY  ++ GYCK  +++ A   +  ++   ++ S+V +N+LI  + ++GN+  A  +
Sbjct: 604 PNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKL 663

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           R+ M S G LP   T+SSLI G C  G++++  ++ +EM+ + L PNV+ +T LI   CK
Sbjct: 664 RDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCK 723

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             +++     L ++  N + P    Y  +IDG+CK GN+ EA  ++ EM      PD VT
Sbjct: 724 LGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVT 783

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCA-PDDITVNSLI 549
           +  L  G+C +  +   +   +K   IG    ++IT N+LI
Sbjct: 784 YNALQKGYCKERELTVTLQSDHKS-NIGLPLEEEITYNTLI 823



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 216/501 (43%), Gaps = 76/501 (15%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   +N S  TY +++  L ++ + +    V   M S G  PN  +    +    R G  
Sbjct: 317 VRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDM 376

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA----VYM--------------- 248
             A  +  +     +  +   +N+LL    + N  ++A    VY+               
Sbjct: 377 GEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYV 436

Query: 249 ---------FKEYFRLYSQPDTWTFNI-------LIQGLSRIGEVKKAFEFFYDMGSF-G 291
                    F    ++ ++  +    +       L+ GL +     +A E ++ + +  G
Sbjct: 437 IHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKG 496

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
            + + VT N L+ GLC    +    E+LK++  +     D ++Y ++I G CK GK+++A
Sbjct: 497 LAANTVTSNALLHGLCERGNMEEVFEVLKQM-LEKGLLLDRISYNTLIFGCCKWGKIEEA 555

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             +  EM     +P   T+N L+ G   +G +     +      +G++P+V T++ L++G
Sbjct: 556 FKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEG 615

Query: 412 -----------------------------------YCRNGQLNQGLKLCDEMKGKNLSPN 436
                                              YCR G + +  KL D MK + + P 
Sbjct: 616 YCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPT 675

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             T++ LI+ +C   R+++A+   ++++   L+P  F Y  +I G CK G +D    I+ 
Sbjct: 676 CATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILL 735

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM     +P+K+T+TI+I G+C  G M EA  + N+M+R G APD +T N+    L KG 
Sbjct: 736 EMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNA----LQKGY 791

Query: 557 MPNEAFRIMQRASEDQNLQLP 577
                  +  ++    N+ LP
Sbjct: 792 CKERELTVTLQSDHKSNIGLP 812



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 221/487 (45%), Gaps = 56/487 (11%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS---DG 186
           + R  NPK   +F  F+  + +   + ++Y L++RSL    L DS      ++ +   DG
Sbjct: 92  LHRTVNPKTTHEFFRFATRHCNFRFTVRSYCLLLRSL----LADSFVPRARFLLARLIDG 147

Query: 187 HLPN-----------------SPMIEFFVSSC-IRAGKCDAAKGLL-SQFR--PGEVTMS 225
           H+P                  S M+E    S   R G+ D    +L SQF+         
Sbjct: 148 HVPTWSSKTTTSFHDRLREIASSMLELNQGSDEQRLGELDLLLHILCSQFKCLGSRCAFD 207

Query: 226 TFMY-------------NSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQ 269
            F+              N LL++LVK N   ++     E F L  Q   PD +TF   I 
Sbjct: 208 IFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSY----EVFDLACQGVAPDVFTFTTAIN 263

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL---CRVNEVARGHELLKEVKFKS 326
              + G V  A + F  M   G  P++VTYN +I GL    R  E  R     K+   +S
Sbjct: 264 AFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALR----FKDRMVRS 319

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
           + +P VVTY  +ISG  KL   ++A  +  EM S G  P+ V FN LIDG+ + G+M  A
Sbjct: 320 KVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEA 379

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +R+ M   G  P+ VTF++L+ G+CR+ Q+ Q  ++   +    LS N+   + +I+ 
Sbjct: 380 LRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHR 439

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KRCKP 505
           L + +    A + + +L   ++     +  P++ G CK     EA  +  ++   K    
Sbjct: 440 LMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAA 499

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + VT   L+ G C +G M E   +  +ML  G   D I+ N+LI    K G   EAF++ 
Sbjct: 500 NTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLK 559

Query: 566 QRASEDQ 572
           +   + +
Sbjct: 560 EEMVQQE 566



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 198/446 (44%), Gaps = 39/446 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+   + + C+ G       +F  M   G  PN       +    ++G+ + A     + 
Sbjct: 257 TFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRM 316

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +V  S   Y  L++ L+K    +EA  +  E + +   P+   FN LI G  R G++
Sbjct: 317 VRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDM 376

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG---------------------- 315
            +A     +M   G  P+ VT+NTL+ G CR N++ +                       
Sbjct: 377 GEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYV 436

Query: 316 -HELLKEVKFKSEFSPDVVT-------------YTSVISGYCKLGKMDKATGIYNEMNSC 361
            H L++   F S     +VT              T ++ G CK     +A  ++ ++ + 
Sbjct: 437 IHRLMERSGFVSALK--IVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAV 494

Query: 362 -GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+  + VT N L+ G  + GNM     + ++ML  G L D +++++LI G C+ G++ +
Sbjct: 495 KGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEE 554

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             KL +EM  +   P+ YT+  L+  L    +++D  R L + K    VP  + Y  +++
Sbjct: 555 AFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLE 614

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+CKA  +++A      ++ ++ +   V + ILI  +C  G + EA  + + M   G  P
Sbjct: 615 GYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILP 674

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQ 566
              T +SLI  +   G  +EA  I +
Sbjct: 675 TCATYSSLIHGMCCIGRVDEAKEIFE 700



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 169/364 (46%), Gaps = 25/364 (6%)

Query: 92  EFWFVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLS 151
           E WF       L  ++  S+     LCE+ +     EV+K++       K L   R+   
Sbjct: 486 ELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLE-----KGLLLDRI--- 537

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
                 +YN ++   C+ G  +    + + M      P++    F +      GK D   
Sbjct: 538 ------SYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVH 591

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            LL + +      + + Y  LL    K +  ++AV  FK       +  +  +NILI   
Sbjct: 592 RLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAY 651

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            RIG V +AF+    M S G  P   TY++LI G+C +  V    E+ +E++      P+
Sbjct: 652 CRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMR-NEGLLPN 710

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V  YT++I G+CKLG+MD    I  EM+S GI+P+ +T+ ++IDG+ K+GNM  A  +  
Sbjct: 711 VFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLN 770

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQL----------NQGLKLCDEMKGKNLSPNVYTFT 441
            M+  G  PD VT+++L  GYC+  +L          N GL L +E+    L   ++  T
Sbjct: 771 EMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIHKLHPHT 830

Query: 442 ILIN 445
            + N
Sbjct: 831 AISN 834


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 194/389 (49%), Gaps = 7/389 (1%)

Query: 179 FDYMRSDGHLPNSPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
           F+ M   G    +P +  +   +  C  AG+ D     L         +   ++N LL  
Sbjct: 75  FNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKG 134

Query: 236 LVKQNNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG--SFGC 292
           L      D+A+  + +    L   P+ ++  I+++GL      ++A E  + M     GC
Sbjct: 135 LCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGC 194

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            P++V+Y+T+  GL +  +  + +   +E+       P+VVTY+S+I+  CK   MDKA 
Sbjct: 195 LPNVVSYSTVTDGLLKGGDPDKAYATYREM-LDRRILPNVVTYSSIIAALCKGQAMDKAM 253

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +++ M   G+ P+  T+  L+ GF   G +  A    E+M S G  P+VVT+SS +D  
Sbjct: 254 EVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYL 313

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+NG+  +  K+   M  + L P++ T++ L++    E  L +       +  +D+ P  
Sbjct: 314 CKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDH 373

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           +++N +I    K G VDEA ++ ++M  +  KP+ VT+  LI G+C   RM  A+++F +
Sbjct: 374 YVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQE 433

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           M+  G +P+ IT N ++  L + G    A
Sbjct: 434 MVSNGVSPNFITYNIMLQGLFRTGRTGTA 462



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 192/414 (46%), Gaps = 16/414 (3%)

Query: 134 DNPKLGL-KFLEFSRVNLSL-NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
           DNP   + +F   +R   S+   +  TY +++   C  G  D       ++   G     
Sbjct: 66  DNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKG-FRVE 124

Query: 192 PMI--EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           P+I        C      DA   +L          + F +  +L  L  +N + EA+   
Sbjct: 125 PIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEAL--- 181

Query: 250 KEYFRLYSQ------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            E   + +       P+  +++ +  GL + G+  KA+  + +M      P++VTY+++I
Sbjct: 182 -ELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSII 240

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
           + LC+   + +  E+   +  K+  +P+  TYTS++ G+C  G++ +A     +M S G+
Sbjct: 241 AALCKGQAMDKAMEVHDRM-VKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGV 299

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P+ VT++  +D   K G    A  +   M+  G  PD+ T+SSL+ GY   G L +   
Sbjct: 300 EPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHG 359

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L D M   ++ P+ Y F  LI A  K+ ++++A     +++   L P    YN +I+G+C
Sbjct: 360 LFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYC 419

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           K   ++ A  +  EM      P+ +T+ I++ G    GR   A   + ++++ G
Sbjct: 420 KITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIKSG 473



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           A V ++N   AV  F    R  +    P   T+ ILI      G +   F     +   G
Sbjct: 61  ADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKG 120

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
              + + +N L+ GLC         +++     +    P+V ++T ++ G C   +  +A
Sbjct: 121 FRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEA 180

Query: 352 TGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
             + + M  +  G  P+ V+++ + DG  K G+   A      ML    LP+VVT+SS+I
Sbjct: 181 LELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSII 240

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
              C+   +++ +++ D M    ++PN +T+T L++  C   +L +A +FL+++  N + 
Sbjct: 241 AALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVE 300

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y+  +D  CK G   EA  I   M ++  KPD  T++ L+ G+ ++G +VE   +
Sbjct: 301 PNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGL 360

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           F+ M++    PD    N+LI    K G  +EA  +  +
Sbjct: 361 FDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSK 398



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 1/207 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C  G         + M S+G  PN      F+    + G+C  A+ +    
Sbjct: 270 TYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSM 329

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+SLL+    +    E   +F    +   QPD + FN LI   ++ G+V
Sbjct: 330 VKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKV 389

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  P+ VTYNTLI+G C++  +     L +E+   +  SP+ +TY  
Sbjct: 390 DEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEM-VSNGVSPNFITYNI 448

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIK 364
           ++ G  + G+   A   Y ++   G K
Sbjct: 449 MLQGLFRTGRTGTAKEFYVQIIKSGKK 475


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 184/360 (51%), Gaps = 9/360 (2%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           +G+   A+ +L+   P         YN+++         D A  +  +   +  +PD++T
Sbjct: 107 SGRTAEARRVLAACEP-----DVMAYNAMVAGYCVTGQLDAARRLVAD---MPMEPDSYT 158

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N LI+GL   G    A     DM   GC PD+VTY  L+   C+ +   +  +LL E++
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K   +PD++TY  V++G C+ G++D A      + S G +P+ V++N+++ G       
Sbjct: 219 AKG-CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERW 277

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             AE +   M   GY P+VVTF+ LI   CR G +   +++ D++     +PN  ++  +
Sbjct: 278 EDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           ++A CK+ +++ A  F++ +      P    YN ++   C+ G VD A  ++ ++++K C
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P  +++  +I G    G+  EA+ + N+M+  G  PD IT +++ S L +     EA R
Sbjct: 398 TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIR 457



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 195/381 (51%), Gaps = 3/381 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV-SSCIRAGKCDAAKGLLSQ 216
           TYN ++R LC  G   +  VV D M   G +P+       + ++C R+G   A K LL +
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMK-LLDE 216

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R          YN ++N + ++   D+A+   K       +P+T ++NI+++GL     
Sbjct: 217 MRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A +   +M   G  P++VT+N LIS LCR   V    E+L ++  K   +P+ ++Y 
Sbjct: 277 WEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIP-KYGCTPNSLSYN 335

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++  +CK  KMD+A      M S G  P  V++N L+    + G + +A  +  ++   
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P +++++++IDG  + G+  + L+L +EM  K L P++ T++ + + LC+E+R+ +A
Sbjct: 396 GCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEA 455

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            R   +++   + P   +YN ++ G CK      A  +   M    C P++ T+TILI G
Sbjct: 456 IRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515

Query: 517 HCMKGRMVEAISIFNKMLRIG 537
              +G + EA  +  ++   G
Sbjct: 516 LTYEGLVKEARELLGELCSRG 536



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 148/308 (48%), Gaps = 4/308 (1%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PD   +N ++ G    G++  A     DM      PD  TYNTLI GLC          
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +L ++  +    PDVVTYT ++   CK     +A  + +EM + G  P  +T+NV+++G 
Sbjct: 178 VLDDM-LRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI 236

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G +  A    + + S G  P+ V+++ ++ G C   +     KL  EM  K   PNV
Sbjct: 237 CQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNV 296

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            TF +LI+ LC+   +  A   L Q+      P    YNP++  FCK   +D A   V  
Sbjct: 297 VTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 356

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M  + C PD V++  L+   C  G +  A+ + +++   GC P  I+ N++I  L K G 
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416

Query: 558 PNEAFRIM 565
             EA  ++
Sbjct: 417 TKEALELL 424



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 163/344 (47%), Gaps = 44/344 (12%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P     N  ++GL R G++++A      M     S        LI  LC     A    +
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRV 116

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L   +      PDV+ Y ++++GYC  G++D A  +  +M    ++P + T+N LI G  
Sbjct: 117 LAACE------PDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLC 167

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
             G   +A  + + ML  G +PDVVT++ L++  C+     Q +KL DEM+ K  +P++ 
Sbjct: 168 GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII 227

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ +++N +C+E R++DA  FLK L  +   P    YN V+ G C A   ++A  ++AEM
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287

Query: 499 EEKRCKPDKVTFTILIIGHCMKG-----------------------------------RM 523
            +K   P+ VTF +LI   C +G                                   +M
Sbjct: 288 SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             A++    M+  GC PD ++ N+L++ L +GG  + A  ++ +
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 8/167 (4%)

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P     +  + G  R G L + L+L + M G   S        LI  LC   R  +ARR
Sbjct: 56  VPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARR 115

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L   +     P    YN ++ G+C  G +D A  +VA+M     +PD  T+  LI G C
Sbjct: 116 VLAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLC 167

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +GR   A+ + + MLR GC PD +T   L+    K     +A +++
Sbjct: 168 GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLL 214


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 198/436 (45%), Gaps = 38/436 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           +YN++++SLC  G       +   M   G + +  ++ +   +    + G  + A  L  
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +      Y+S+++AL K    D+A    ++       PD WT+N LI G S  G
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + K+A   F +M      PD+V  NTL+  LC+  ++    ++   +  K + +PDV +Y
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ-NPDVFSY 364

Query: 336 TSVISGYCK-----------------------------------LGKMDKATGIYNEMNS 360
           T +++GY                                      G +DKA  I+NEM  
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 424

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+KP  VT+  +I    ++G M  A     +M+  G +PD   +  LI G+C +G L +
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             +L  E+    +  ++  F  +IN LCK  R+ DA+          L P   +YN ++D
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 544

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+C  G +++A  +   M     +P+ V +  L+ G+C  GR+ E +S+F +ML+ G  P
Sbjct: 545 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 604

Query: 541 DDITVNSLISCLLKGG 556
             I  N +I  L + G
Sbjct: 605 STILYNIIIDGLFEAG 620



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 212/442 (47%), Gaps = 7/442 (1%)

Query: 127 LEVIKRLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRS 184
           ++   R   P+L L F  +  R  L ++    ++  +++  CE    D ++ ++      
Sbjct: 120 MDCCTRAHRPELALAFFGQLLRTGLRVDAIIASH--LLKGFCEAKRTDEALDILLHRTPE 177

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNA 242
            G +P+       + S    GK   A  LL     G    S     YN++++   K+ + 
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++A  +FKE  +    PD  T++ ++  L +   + KA  F   M + G  PD  TYN L
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G     +      + KE++ +S   PDVV   +++   CK GK+ +A  +++ M   G
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQS-ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P   ++ ++++G+   G +V    + + ML  G  P + TF+ LI  Y   G L++ +
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 416

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM+   + P+V T+  +I ALC+  +++DA     Q+    +VP  + Y+ +I GF
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G++ +A  +++E+     + D V F  +I   C  GR+++A +IF+  + +G  PD 
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536

Query: 543 ITVNSLISCLLKGGMPNEAFRI 564
           +  N L+      G   +A R+
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRV 558



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 175/365 (47%), Gaps = 4/365 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-Y 247
           P S      +  C RA + + A     Q     + +   + + LL    +    DEA+  
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISG 305
           +      L   PD +++NIL++ L   G+  +A +    M   G  CSPD+V YNT+I G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             +  +V +  +L KE+  +    PD+VTY+SV+   CK   MDKA     +M + G+ P
Sbjct: 231 FFKEGDVNKACDLFKEM-VQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
              T+N LI G+   G    A  + + M     LPDVV  ++L+   C+ G++ +   + 
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K  +P+V+++TI++N    +  L D       +  + + P    +N +I  +   
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D+A +I  EM +   KP  VT+  +I   C  G+M +A+  FN+M+  G  PD    
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 546 NSLIS 550
           + LI 
Sbjct: 470 HCLIQ 474



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 199/420 (47%), Gaps = 4/420 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N +M SLC+ G     + VFD M   G  P+       ++     G       L      
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             +      +N L+ A       D+A+ +F E      +P   T+  +I  L RIG++  
Sbjct: 390 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A E F  M   G  PD   Y+ LI G C    + +  EL+ E+   +    D+V + S+I
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI-MNNGMRLDIVFFGSII 508

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
           +  CKLG++  A  I++   + G+ P AV +N+L+DG+  VG M  A  + + M+S G  
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 568

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+VV + +L++GYC+ G++++GL L  EM  K + P+   + I+I+ L +  R   A+  
Sbjct: 569 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++  + +      Y+ V+ G  K    DEA  +  E+     K D +T   +I G   
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNLQL 576
             R+ EA  +F  + R G  P  +T + +I+ L+K G+  EA   F  MQ A  + + +L
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 748



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y +++      G    +  +FD M  DG  P        + +    G  D A  + ++ 
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      Y +++ AL +    D+A+  F +       PD + ++ LIQG    G +
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E   ++ + G   DIV + ++I+ LC++  V     +  ++       PD V Y  
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYNM 541

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC +GKM+KA  +++ M S GI+P+ V +  L++G+ K+G +     +   ML  G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + ++ +IDG    G+         EM    ++ N  T++I++  L K    ++A 
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+L+  ++       N +I G  +   V+EA  + A +      P  VT++I+I   
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +G + EA  +F+ M   GC PD   +N ++  LLK
Sbjct: 722 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 187/408 (45%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++++    G+ D   ++F+ MR  G  P+       +++  R GK D A    +Q 
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    + Y+ L+       +  +A  +  E      + D   F  +I  L ++G V
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F    + G  PD V YN L+ G C V ++ +   +  +    +   P+VV Y +
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVGYGT 576

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYCK+G++D+   ++ EM   GIKPS + +N++IDG  + G  V A+     M   G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +  T+S ++ G  +N   ++ + L  E++  N+  ++ T   +I  + +  R+ +A+
Sbjct: 637 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 696

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  + LVP    Y+ +I    K G V+EA  + + M+   C+PD      ++   
Sbjct: 697 DLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 756

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             K  +V A +  +K+     + + +T   L+      G   E  R +
Sbjct: 757 LKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
            SP   TY  ++    +  + + A   + ++   G++  A+  + L+ GF +      A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILI 444
           + +  R    G +PDV +++ L+   C  G+  Q   L   M   G   SP+V  +  +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +   KE  +N A    K++    + P    Y+ V+   CKA  +D+A   + +M  K   
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           PD  T+  LI G+   G+  EA+ +F +M R    PD + +N+L+  L K G   EA
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 10/274 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN+ L+     YN++M   C +G  +    VFD M S G  PN       V+   + G+ 
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    L  +     +  ST +YN +++ L +      A   F E        +  T++I+
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++GL +     +A   F ++ +     DI+T NT+I+G+ +   V    +L   +  +S 
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS-RSG 706

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
             P  VTY+ +I+   K G +++A  +++ M + G +P +   N ++    K   +V A 
Sbjct: 707 LVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAG 766

Query: 387 ---EYMRERMLSFGYLPDVV---TFSSLIDGYCR 414
                + ER  S  +L  ++    FSS   G CR
Sbjct: 767 AYLSKIDERNFSLEHLTAMLLVDLFSS--KGTCR 798



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 6/213 (2%)

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P++ T+ +L+D   +      A     ++L  G   D +  S L+ G+C   + ++ L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 423 K-LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV--PKPFMYNPVI 479
             L          P+V+++ IL+ +LC + +   A   L+ +     V  P    YN VI
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DGF K G+V++A  +  EM ++   PD VT++ ++   C    M +A +   +M+  G  
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 540 PDDITVNSLISCLLKGGMPNEAFRI---MQRAS 569
           PD+ T N+LI      G   EA R+   M+R S
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 185/350 (52%), Gaps = 5/350 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S ++YN LL + +++N  +   +++K+       P+ +TFN+LI  L   G ++ A E F
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + GC P+  T+  L+ G CR    ++G ELL +++      P+ V Y ++IS +CK
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMG-ILPNNVLYNTLISSFCK 229

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL----P 400
            GK   A  + ++M   G+ P   TFN  I      G ++ A  +   M     L    P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           +V+T+  ++ G+C+ G L +   L D MK      N+ ++ I +  L +  +L +A   L
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           K++    + P  + YN V+DG CK G + +A +++  M      PD VT++ L+ G+C K
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G++ EA ++ ++M+   C+P+  T N L+  L K G  +EA  ++Q+ +E
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNE 459



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 191/381 (50%), Gaps = 5/381 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P+  +    + SCIR  + +    L        V+   + +N L+  L    + ++A  +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F +      +P+ +TF IL++G  R G   K  E    M + G  P+ V YNTLIS  C+
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN---SCGI-K 364
             +     +L+ +++ +    P V T+ S IS  C  GK+ +A+ I+ +M      G+  
Sbjct: 230 EGKTHDAEKLVDKMR-EDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ +T+ +++ GF K G +  A+ + + M       ++ +++  + G  RNG+L +   +
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIV 348

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
             EM G  + P++Y++ I+++ LCK   L+DAR  +  +  N ++P    Y+ ++ G+C 
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G V EAN ++ EM    C P+  T  +L+     +GR+ EA ++  KM   G   D +T
Sbjct: 409 KGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVT 468

Query: 545 VNSLISCLLKGGMPNEAFRIM 565
            N +I+ L   G  ++A  I+
Sbjct: 469 CNIIINALCNNGQLDKAIEIV 489



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 199/462 (43%), Gaps = 31/462 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+VM  LC+ G+    +++   M  +G LP++      +      GK   A  LL + 
Sbjct: 363 SYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEM 422

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                + +T+  N LL++L K+    EA  + ++        DT T NI+I  L   G++
Sbjct: 423 ISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQL 482

Query: 278 KKAFEFFYDMGSFG-----------------------CSPDIVTYNTLISGLCRVNEVAR 314
            KA E    M + G                       C+PD+VTY+T+ISGLC+   +  
Sbjct: 483 DKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDD 542

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             +   E+  K    PD   Y + I  +C+ GK+  A  +  +M   G   +  T+N LI
Sbjct: 543 AKKKFIEMMSKG-LQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLI 601

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G G    +     + + M   G  PDV T++ +++  C  G++N    + DEM  K +S
Sbjct: 602 LGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGIS 661

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PN+ +F ILI A CK      +     ++  N    K  +Y  + +     G V EA  +
Sbjct: 662 PNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTLMFNELLVGGKVAEAKEL 720

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
                ++        +  LI   C   ++  A  + ++++  G   D  +   +I    K
Sbjct: 721 FETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGK 780

Query: 555 GG---MPNE-AFRIMQRASED--QNLQLPSWKKAVPLRTNTD 590
            G   + +E A R+M+ ASE   +N   P+ K  +    N D
Sbjct: 781 MGNKHVADELAERMMEMASESNKENKAYPNVKGHILRNKNKD 822



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 80/178 (44%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P +  ++ L+    R  ++     L  +M    +SP  YTF +LI  LC    L DAR  
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++      P  F +  ++ G+C+AG   +   ++ +M      P+ V +  LI   C 
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
           +G+  +A  + +KM   G  P   T NS IS L   G   EA RI +    D+ L LP
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLP 287


>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 193/398 (48%), Gaps = 7/398 (1%)

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA----KGLLSQFR 218
           +R +CE GL +     FD ++  G+ P      F   SC++ G+ D      +G++    
Sbjct: 162 IRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGV 221

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +V + T  Y  L+ A    N    A  + ++       P    FN LI G  +     
Sbjct: 222 QKDVDIETVGY--LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHH 279

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +  E  + M     +PDI TY  +I+G C+     +  E+   +K +  ++PD+V YT++
Sbjct: 280 RVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRG-YAPDMVMYTTL 338

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK+G+++ A+ ++ EM   G  P+  ++N LI GF K+GN+  A  + ++ML  GY
Sbjct: 339 IHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGY 398

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
               ++ ++LI G C +G+ ++      EM  KN+  +V T+  LI   C+E ++  +  
Sbjct: 399 KETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTD 458

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            LK+L+   L P    Y  +I   C+ G+V EA  +  +M  +  +P   T   +I G C
Sbjct: 459 LLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLC 518

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            +G +VE +     ML+    P   T   LI  L++ G
Sbjct: 519 EQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 556



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 164/378 (43%), Gaps = 10/378 (2%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLS--QFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           LP+         + + A  C  AK  L   +F P   ++  ++       LV     +EA
Sbjct: 120 LPHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLV-----EEA 174

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD--IVTYNTLI 303
           VY F        +P   T+N   Q   + G     ++ +  M   G   D  I T   LI
Sbjct: 175 VYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLI 234

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
              C  N+V+R +E+L++   +   +P    +  +ISG+CK     +   + + M     
Sbjct: 235 QAFCNDNKVSRAYEILRQ-SLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNR 293

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   T+  +I+GF K    + A  +   +   GY PD+V +++LI G+C+ GQL    K
Sbjct: 294 NPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASK 353

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM  K   PN Y++  LI   CK   L++A +  K++  +         N +I G C
Sbjct: 354 LWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLC 413

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             G  DEA     EM  K    D +T+  LI G C +G+++++  +  ++   G  P   
Sbjct: 414 LHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTS 473

Query: 544 TVNSLISCLLKGGMPNEA 561
           +   LI  L + G   EA
Sbjct: 474 SYAHLIQKLCQLGSVQEA 491



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 150/342 (43%), Gaps = 20/342 (5%)

Query: 231 SLLNALVKQNNADEAVYMFKEYF-RLYSQPDTW----TFNILIQGLSRIGEVKKAFEFFY 285
           S  + L+KQ N    V++   +F  L SQP+      + N L   L        A  F Y
Sbjct: 91  SFFSELLKQLNN---VFLSLRFFLWLSSQPEFLPHPVSCNKLFDALLEAKACVPAKSFLY 147

Query: 286 DMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
              SF  SP+  +    I  +C    V E     ++LKE  ++    P V T+       
Sbjct: 148 ---SFEFSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYR----PYVETWNFAFQSC 200

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSA--VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
            K G+ D    +Y  M   G++      T   LI  F     +  A  +  + L  G  P
Sbjct: 201 LKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTP 260

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
               F+ LI G+C+    ++ L+L   M  KN +P+++T+  +IN  CK      A    
Sbjct: 261 CNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVF 320

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
             LK     P   MY  +I GFCK G +++A+ +  EM +K   P++ ++  LI G C  
Sbjct: 321 NALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKI 380

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           G + EA+ ++ KML  G     ++ N+LI  L   G  +EA+
Sbjct: 381 GNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAY 422



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 1/260 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+  +      VF+ ++  G+ P+  M    +    + G+ + A  L  + 
Sbjct: 299 TYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEM 358

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + + YN+L+    K  N DEA+ ++K+      +  T + N LI GL   G  
Sbjct: 359 IDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRT 418

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++FF +M       D++TYNTLI G CR  +V +  +LLKE++ K    P   +Y  
Sbjct: 419 DEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKG-LQPSTSSYAH 477

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C+LG + +A  ++N+M++ G++P   T + +I G  + G +V        ML   
Sbjct: 478 LIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSN 537

Query: 398 YLPDVVTFSSLIDGYCRNGQ 417
             P   TF  LI    + G+
Sbjct: 538 LKPQKETFYKLIQSLIQIGK 557



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 6/276 (2%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P  V+ N L   L            L    +  EFSP+  +  + I   C+ G +++A  
Sbjct: 121 PHPVSCNKLFDALLEAKACVPAKSFL----YSFEFSPEPASLENYIRCVCEGGLVEEAVY 176

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV--VTFSSLIDG 411
            ++ +   G +P   T+N       K G       + E M+  G   DV   T   LI  
Sbjct: 177 TFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQA 236

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           +C + ++++  ++  +     L+P    F  LI+  CKE   +     +  +   +  P 
Sbjct: 237 FCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPD 296

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            F Y  +I+GFCK     +A  +   ++++   PD V +T LI G C  G++ +A  ++ 
Sbjct: 297 IFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWF 356

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +M+  G  P++ + N+LI    K G  +EA ++ ++
Sbjct: 357 EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKK 392


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 222/450 (49%), Gaps = 30/450 (6%)

Query: 129 VIKRLDNPKLGLKFLEF-SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           V+ R+ + +LGLKF ++ SR   S   +   Y+ +++ L    +   ++VV + MR +  
Sbjct: 66  VLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEM 125

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMY-------NSLLNALVKQN 240
            P    +   + +   +G  + A  L          + T+ Y       NSLLN LVK  
Sbjct: 126 SPTREAMSIVIQAYSDSGLVEKALELYY------FVLKTYTYFPDVIACNSLLNMLVKLG 179

Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
             + A        R ++        I+++GL + G++++  +   D    GC P+I+ YN
Sbjct: 180 RIEIA--------RKFT-------CIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYN 224

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           TLI G C+  ++   + L  E+K K  F P V TY ++I+G+CK G       +  EMNS
Sbjct: 225 TLIDGYCKKGDMEMANGLFIELKLKG-FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNS 283

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+  +   +N +ID   K G++V A    E M+  G  PD+VT+++LI G CR+G++++
Sbjct: 284 RGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSE 343

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             +L ++  GK L PN +++T LI+A CK+   + A  +L ++      P    Y  ++ 
Sbjct: 344 ADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVH 403

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G   AG VD A  I  +M E+   PD   + IL+ G C K ++  A  +  +ML     P
Sbjct: 404 GLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLP 463

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D     +L+   ++ G  +EA ++ +   E
Sbjct: 464 DAFVYATLVDGFIRNGNLDEARKLFELTIE 493



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 183/381 (48%), Gaps = 1/381 (0%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           ++++ LC+ G  +  + + +     G +PN       +    + G  + A GL  + +  
Sbjct: 190 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 249

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
               +   Y +++N   K+ +      +  E        +   +N +I    + G + KA
Sbjct: 250 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 309

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
            E    M   GC PDIVTYNTLISG CR  +V+   +LL++   K    P+  +YT +I 
Sbjct: 310 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG-LMPNKFSYTPLIH 368

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
            YCK G  D+A+    EM   G KP  VT+  L+ G    G +  A  +RE+ML  G  P
Sbjct: 369 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 428

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D   ++ L+ G C+  +L     L  EM  +++ P+ + +  L++   +   L++AR+  
Sbjct: 429 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 488

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           +      + P    YN +I G+CK G + +A   +  M+++   PD+ T++ +I G+  +
Sbjct: 489 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQ 548

Query: 521 GRMVEAISIFNKMLRIGCAPD 541
             +  A  +F +M+++ C P+
Sbjct: 549 HDLDGAQKMFREMVKMKCKPN 569



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 176/359 (49%), Gaps = 1/359 (0%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             V    + GK +  + L+          +   YN+L++   K+ + + A  +F E    
Sbjct: 190 IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK 249

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
              P   T+  +I G  + G+ K       +M S G + ++  YNT+I    +   + + 
Sbjct: 250 GFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 309

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            E + E   +    PD+VTY ++ISG C+ GK+ +A  +  +    G+ P+  ++  LI 
Sbjct: 310 VETI-EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 368

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
            + K G    A      M   G+ PD+VT+ +L+ G    G+++  L + ++M  + + P
Sbjct: 369 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 428

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           +   + IL++ LCK+ +L  A+  L ++    ++P  F+Y  ++DGF + GN+DEA  + 
Sbjct: 429 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 488

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
               EK   P  V +  +I G+C  G M +A++  N+M +   APD+ T +++I   +K
Sbjct: 489 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVK 547



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 128/301 (42%), Gaps = 20/301 (6%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQV---VFDYMRSDGHL----------------PNSPMIEF 196
           FK  + ++  +   GL  +VQV   + D     GH+                P+      
Sbjct: 271 FKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNT 330

Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
            +S   R GK   A  LL Q     +  + F Y  L++A  KQ   D A     E     
Sbjct: 331 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 390

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            +PD  T+  L+ GL   GEV  A      M   G  PD   YN L+SGLC+  ++    
Sbjct: 391 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 450

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            LL E+  +S   PD   Y +++ G+ + G +D+A  ++      G+ P  V +N +I G
Sbjct: 451 LLLAEMLDQSVL-PDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKG 509

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           + K G M  A     RM      PD  T+S++IDGY +   L+   K+  EM      PN
Sbjct: 510 YCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569

Query: 437 V 437
           V
Sbjct: 570 V 570


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 208/445 (46%), Gaps = 31/445 (6%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +FK+Y+LV+  L           VF  M S G  P        + +     + D+A  LL
Sbjct: 182 TFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLL 241

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                     ++ +Y +L++AL ++N   EA+ + +E F +   PD  TFN +I GL ++
Sbjct: 242 RDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKV 301

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV------------ 322
            ++  A +    M   G  PD +TY  L+ GLCR+ ++    ++L ++            
Sbjct: 302 NKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLI 361

Query: 323 -------------KFKSE------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                         F +E      F PD+ TY  ++ G CK G +  A  + NEM+  G 
Sbjct: 362 NGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGC 421

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P+ +T+ +L++G  K G +  A  +   M + G   + V ++ LI   CR  +++  L 
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM  K   P+++T+  LI  LCK +R+++A R    +  +  V     YN +I    
Sbjct: 482 LLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL 541

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           + G   +A  +V +M  + C  DK+T+  LI   C  G + + + ++ +M+  G   D I
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTI 601

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRA 568
           + N +I+ L K G  + AF  ++ A
Sbjct: 602 SCNIMINGLCKVGKVDNAFEFLRDA 626



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 204/418 (48%), Gaps = 10/418 (2%)

Query: 157 KTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +T+N V+  LC++  +HD+ ++V D M   G  P++    F +    R GK + A+ +L 
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLV-DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI 347

Query: 216 QFR-PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSR 273
           +   P    +     N+L+N  V      EA     E    +  QPD +T+NIL+ GL +
Sbjct: 348 KIPCPNNAIL-----NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G +  A +   +M   GC P+++TY  L++GLC+   +     +L E+  +   + + V
Sbjct: 403 EGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG-LTINSV 461

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            Y  +I   C+  K+  A  + +EM + G KP   T+N LI G  KV  +  A  +   M
Sbjct: 462 IYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           L  G + + VT+++LI    R G   + L L ++M  +  + +  T+  LI A CK   +
Sbjct: 522 LLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNI 581

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
                  +Q+  + L       N +I+G CK G VD A   + +   +   PD VT+  +
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSV 641

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + G C  GR+ EA+++F+++   G  PD  T N+ IS   K GM N+A     R  E+
Sbjct: 642 LNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIEN 699



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 189/358 (52%), Gaps = 3/358 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FL  + +N        TYN++M  LC+ G     + + + M   G  PN       V+  
Sbjct: 376 FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            +AG  + A  +L +     +T+++ +YN L+ AL ++     A+ +  E      +PD 
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T+N LI GL ++  + +AF  F++M   G   + VTYNTLI  L R     +   L+ +
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F+   + D +TY  +I  +CK+G ++K   +Y +M   G+    ++ N++I+G  KVG
Sbjct: 556 MLFRG-CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614

Query: 382 NMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
            + +A E++R+  ++ G++PD+VT++S+++G C+ G++ + L L D ++ + + P+ +T+
Sbjct: 615 KVDNAFEFLRDA-INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
              I+  CKE  +NDA  F  +   N  VP    +N ++    K  N +    ++ E+
Sbjct: 674 NTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/289 (35%), Positives = 159/289 (55%), Gaps = 1/289 (0%)

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           + FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K 
Sbjct: 125 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KS 183

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
               S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G
Sbjct: 184 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  A  + ++MLS   LPD++T+++LI G C+ G LNQ   L DEM  K L P+ +T+T
Sbjct: 244 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYT 303

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LI+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM   
Sbjct: 304 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSV 363

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
             KPD  T+T++I   C KG + +   +  +M R G  P   T N L++
Sbjct: 364 GLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMN 412



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 187/356 (52%), Gaps = 11/356 (3%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW----TFNILIQGLSRIGEVKKAFE 282
           ++++ L+ A ++     +A+    E +RL  +   W    T   +++ L ++   K  + 
Sbjct: 55  YVFSGLITAYLESGFLRDAI----ECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWG 110

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           F+ ++   G    +  +N L+   C+  ++     +   +  K    P VV+Y ++++GY
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGY 169

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            +LG +D+   + + M + G++P   T++VLI+G  K   M  A  + + ML  G +P+ 
Sbjct: 170 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 229

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VTF++LIDG+C+NG+++  +++  +M  ++L P++ T+  LI  LCK+  LN A   + +
Sbjct: 230 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDE 289

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    L P  F Y  +IDG CK G++D A      M ++  + D V +T +I G C +GR
Sbjct: 290 MSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGR 349

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
            V+A  +  +ML +G  PD  T   +I+   K G   +  ++++     +N  +PS
Sbjct: 350 PVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ--RNGHVPS 403



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 158/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 123 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK
Sbjct: 183 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LVPNGVTFTTLIDGHCK 241

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++  A  + + M   G  PD  T
Sbjct: 242 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFT 301

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T +I+ LC+E R  DA + L+++ 
Sbjct: 302 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREML 361

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM+     P   T+ +L+ G
Sbjct: 362 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 123 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  + 
Sbjct: 183 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 242

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S    PD++TYNTLI GLC+  ++ + H L+ E+  K    PD  T
Sbjct: 243 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKG-LKPDKFT 301

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A      M    I+   V +  +I G  + G  V AE M   ML
Sbjct: 302 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREML 361

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           S G  PD  T++ +I+ +C+ G + +G KL  EM+     P+V T+ +L+N 
Sbjct: 362 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 295 DIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           DI  ++ LI+       + +    + L +E K    F     T   V+    KL      
Sbjct: 53  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFD----TCRKVLEHLMKLRYFKLV 108

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
            G Y E+  CG   S   FN+L+  F K G++  A+ + + +  +G  P VV++++L++G
Sbjct: 109 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG 168

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y R G L++G +L   M    + P+VYT+++LIN LCKE++++DA     ++    LVP 
Sbjct: 169 YIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPN 228

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +  +IDG CK G VD A  I  +M  +   PD +T+  LI G C KG + +A  + +
Sbjct: 229 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLID 288

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           +M   G  PD  T  +LI    K G  + AF   +R  + +N++L
Sbjct: 289 EMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQ-ENIRL 332


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 196/403 (48%), Gaps = 1/403 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C+ G       VF+ ++  G LP        +    +AGK      LL++  
Sbjct: 243 YNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMN 302

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + ++  ++NS+++A  K    D+A  M +    +  +PD  T+NILI      G +K
Sbjct: 303 VMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIK 362

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A EF          P+  +Y  L+   C+  +     ++L ++    +  PD+V+Y + 
Sbjct: 363 EAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGD-KPDLVSYGAF 421

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G    G++D A  +  +M   G+ P A  +NVL+ G  K G   +A+ +   ML    
Sbjct: 422 IHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNL 481

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD   +++L+DG+ RN +L++  +L + +  K + P V  + ++I  LCK  ++ DA  
Sbjct: 482 QPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVS 541

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           ++ ++K  +  P  + ++ VIDG+ K  ++D A  +  +M +++ KP+ V +T LI G C
Sbjct: 542 YVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFC 601

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               M  A  +F  M      P+ +T   LI    K G P +A
Sbjct: 602 KIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKA 644



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 208/451 (46%), Gaps = 19/451 (4%)

Query: 129 VIKRLDNPKLGLKFLEF-SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           VI R+ NP+ GL F  + S +  S   +   Y+ +++ + +  L   +++V + M++   
Sbjct: 65  VIDRIHNPQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNF 124

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGL------LSQFRPGEVTMSTFMYNSLLNALVKQNN 241
            P    +   +      G  D A  +      L    P  V       NSLLN LVK   
Sbjct: 125 KPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVA-----NNSLLNCLVKNGK 179

Query: 242 ADEAVYMFKEYFR------LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
            D A  ++ +         L    D ++  I+++GL  +G+V++  +   D    GC P+
Sbjct: 180 VDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPN 239

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           +V YN +I G C+  ++ R   + +E+K K  F P + TY ++I G+CK GK      + 
Sbjct: 240 VVFYNVIIDGYCKKGDLKRATRVFEELKLKG-FLPTLETYGALIDGFCKAGKFQVVDQLL 298

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
           NEMN  G+  +   FN +ID   K G +  A  M   M   G  PD+ T++ LI+  C  
Sbjct: 299 NEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSG 358

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G++ +  +  +  K + L PN +++T L++A CK+     A   L ++      P    Y
Sbjct: 359 GRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSY 418

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
              I G    G +D A ++  +M EK   PD   + +L+ G C KGR   A  + ++ML 
Sbjct: 419 GAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLD 478

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           +   PD     +L+   ++    ++A  + +
Sbjct: 479 LNLQPDAYMYATLVDGFIRNNELDKATELFE 509



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 200/449 (44%), Gaps = 20/449 (4%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           +FLE ++    L + F +Y  +M + C+ G +     +   +   G  P+      F+  
Sbjct: 366 EFLERAKERTLLPNKF-SYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHG 424

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            +  G+ D A  +  +     V     +YN L++ L K+     A  +  E   L  QPD
Sbjct: 425 SVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPD 484

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            + +  L+ G  R  E+ KA E F  + S G  P +V YN +I GLC+  ++      + 
Sbjct: 485 AYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVN 544

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           ++K  +  +PD  T+++VI GY K   +D A  ++ +M     KP+ V +  LI+GF K+
Sbjct: 545 KMKIANH-APDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKI 603

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
            +M  AE +   M SF   P+VVT++ LI G+ + G+  +     + M   N  PN  TF
Sbjct: 604 ADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTF 663

Query: 441 TILINALC---------KENRLNDARRFLKQLK------WNDLVPKPFMYNPVIDGFCKA 485
             LIN L          ++N  ND    L          W+ ++     YN +I   CK 
Sbjct: 664 HYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIAT---YNSIIVCLCKH 720

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G VD A ++  +M  K    D V F+ L+ G C  G+  E  +I +  L           
Sbjct: 721 GMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEY 780

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           +  +   L  G P+EA  I+    ED  L
Sbjct: 781 SLKLDKYLYDGKPSEASYILLNLIEDSKL 809


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 209/445 (46%), Gaps = 4/445 (0%)

Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTY--NLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           V  ++ +P+LGL F E++    +L++S   +  + +++ L    +   ++ + + M+S  
Sbjct: 67  VFDQIHDPRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKE 126

Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEA 245
            +P    + F +S+   +G    A  L +            F  NSLLN LV     + A
Sbjct: 127 LIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIA 186

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             ++ E        D +T  I+ +GL + G+V++           GC P+IV YNTLI G
Sbjct: 187 RKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDG 246

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
            C+  ++ R + L KE+K K  F P V TY ++I+ +CK GK +    +  EM   G+  
Sbjct: 247 YCKNGDIERANLLFKELKVKG-FLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAV 305

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           S   FN +ID   K G  + A      M+  G  PD+ T+++LI+G C  G++ +  +L 
Sbjct: 306 SLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELL 365

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           +    + L PN +++T LI+A  K      A   L ++           Y  ++ G   A
Sbjct: 366 EHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVA 425

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G VD A  +  +M E+   PD   + +L+ G C KGR   A  +  +ML     PD    
Sbjct: 426 GEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVN 485

Query: 546 NSLISCLLKGGMPNEAFRIMQRASE 570
            +L+   ++ G  +EA ++ Q   E
Sbjct: 486 ATLVDGFIRHGNLDEAKKLFQLTIE 510



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 10/425 (2%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG-KCDAAKGL 213
           + KTY  ++ + C+ G  ++V  +   M+  G   +  +    + +  + G + +AA  +
Sbjct: 271 TVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAV 330

Query: 214 LSQFRPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
                 G E  M+T  YN+L+N    +    EA  + +   R    P+ +++  LI   S
Sbjct: 331 RWMIESGCEPDMAT--YNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFS 388

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + GE  +A E   +M   G + D++ Y  L+ GL    EV     + ++   +    PD 
Sbjct: 389 KNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTV-RDKMMERGILPDA 447

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             Y  ++SG CK G+   A  +  EM    + P A     L+DGF + GN+  A+ + + 
Sbjct: 448 NIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQL 507

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
            +  G    VV  +++I GYC+ G +N  L     M     SP+ +T++ +I+   K+N 
Sbjct: 508 TIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQND 567

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           L  A R    +      P    +  +I+GFC+ G+++ A  +  EM     +P+ VT+TI
Sbjct: 568 LRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTI 627

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           LI   C +G++ +A   F +ML   C P+D T N L++    G   N    I  + S  Q
Sbjct: 628 LIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVN----GLTNNNGIAISSKRSNSQ 683

Query: 573 -NLQL 576
            NL L
Sbjct: 684 PNLTL 688



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 184/416 (44%), Gaps = 32/416 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGL 213
           TYN ++   C  G     + + ++    G  PN    +P+I  F     + G+   A  L
Sbjct: 344 TYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFS----KNGEYVRASEL 399

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L +      T+    Y +L++ LV     D A+ +  +       PD   +N+L+ GL +
Sbjct: 400 LIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCK 459

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G    A +   +M     +PD     TL+ G  R   +    +L  ++  +      VV
Sbjct: 460 KGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLF-QLTIERGIDTSVV 518

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
              ++I GYCK G M+ A   +  M +    P   T++ +IDG+ K  ++  A  M   M
Sbjct: 519 ECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLM 578

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           L     P+VVTF+SLI+G+CRNG LN+  K+ +EM+     PNV T+TILI   CKE +L
Sbjct: 579 LKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKL 638

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV----- 508
             A  F +Q+  N  +P    +N +++G      +   N I    +    +P+       
Sbjct: 639 TKACFFFEQMLINKCIPNDATFNYLVNG------LTNNNGIAISSKRSNSQPNLTLEFFG 692

Query: 509 ------------TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                        +  +++  C    +  A+ + +KM+  G  PD ++  +L+  L
Sbjct: 693 MMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGL 748



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 171/363 (47%), Gaps = 30/363 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN++M  LC+ G   + + +   M      P++ +    V   IR G  D AK L     
Sbjct: 450 YNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTI 509

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  S    N+++    K    ++A+  FK  F     PD +T++ +I G  +  +++
Sbjct: 510 ERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLR 569

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   F  M    C P++VT+ +LI+G CR  ++ R  ++ +E++    F P+VVTYT +
Sbjct: 570 GALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMR-SFGFEPNVVTYTIL 628

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF-GKVGNMVSAEYMRER----- 392
           I  +CK GK+ KA   + +M      P+  TFN L++G     G  +S++    +     
Sbjct: 629 IGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTL 688

Query: 393 -----MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                M+S G+   +  ++S++   C++  +   L+L D+M  K   P+  +F  L++ L
Sbjct: 689 EFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGL 748

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPF---------MYNPVIDGFCKAGNVDEANVIVAEM 498
           C E RL D         WN+++P  F          Y+  +D F   G   +A++++  +
Sbjct: 749 CLEGRLQD---------WNNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTL 799

Query: 499 EEK 501
            EK
Sbjct: 800 VEK 802


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 237/486 (48%), Gaps = 53/486 (10%)

Query: 125 NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
            +++V  R +  +  L+FLE  +V + +  +  TYN ++R  C++   +    + + M S
Sbjct: 282 TTIDVFVRANRLEKALRFLERMQV-VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR------PGEVTMSTFMYNSLLNALVK 238
            G LP+       +    +  +    + L+ +        P +VT     YN+L++ L K
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT-----YNTLIHMLTK 395

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIV 297
            ++ADEA++  K+      + D   ++ ++  L + G + +A +   +M S G C PD+V
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY  +++G CR+ EV +  +LL +V       P+ V+YT++++G C+ GK  +A  + N 
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLL-QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNM 514

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP----------------- 400
                  P+++T++V++ G  + G +  A  +   M+  G+ P                 
Sbjct: 515 SEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGR 574

Query: 401 ------------------DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
                             +VV F+++I G+C+N +L+  L + D+M   N   +V+T+T 
Sbjct: 575 THEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTT 634

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEK 501
           L++ L K+ R+ +A   +K++    + P P  Y  VI  +C+ G VD+   I+ +M   +
Sbjct: 635 LVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 694

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           +C   +  +  +I   C+ G++ EA ++  K+LR     D  T  +L+   LK G+P  A
Sbjct: 695 KC---RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSA 751

Query: 562 FRIMQR 567
           +++  R
Sbjct: 752 YKVACR 757



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 230/502 (45%), Gaps = 38/502 (7%)

Query: 104 LRSSY--LSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNL 161
           LRSS+    +   R L   L P     V++  D+ ++ LKF  ++       H    Y  
Sbjct: 153 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYS 212

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++  L +  L    + V   M+  G           + S  RAG+   A  +L+  +   
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V  +  + N+ ++  V+ N  ++A+   +    +   P+  T+N +I+G   +  V++A 
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS- 340
           E   DM S GC PD V+Y T++  LC+   +    +L+K++  +    PD VTY ++I  
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392

Query: 341 ---------------------------GY-------CKLGKMDKATGIYNEMNSCG-IKP 365
                                      GY       CK G+M +A  + NEM S G   P
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             VT+  +++GF ++G +  A+ + + M + G+ P+ V++++L++G CR G+  +  ++ 
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           +  +    SPN  T++++++ L +E +L++A   ++++      P P   N ++   C+ 
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G   EA   + E   K C  + V FT +I G C    +  A+S+ + M  I    D  T 
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632

Query: 546 NSLISCLLKGGMPNEAFRIMQR 567
            +L+  L K G   EA  +M++
Sbjct: 633 TTLVDTLGKKGRIAEATELMKK 654



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 183/424 (43%), Gaps = 39/424 (9%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI-EFFVSSCIRAGKCDAAKGLLSQF 217
           Y+ ++ +LC+ G     + + + M S GH P   +     V+   R G+ D AK LL   
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T  Y +LLN + +   + EA  M       +  P++ T+++++ GL R G++
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M   G  P  V  N L+  LCR        + ++E   K   + +VV +T+
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG-CAINVVNFTT 599

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G+C+  ++D A  + ++M          T+  L+D  GK G +  A  + ++ML  G
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT+ ++I  YC+ G+++  + + ++M  +     +                    
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI-------------------- 699

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                            YN VI+  C  G ++EA+ ++ ++     + D  T   L+ G+
Sbjct: 700 -----------------YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 742

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
             KG  + A  +  +M      PD      L   L+  G  +EA ++M R  E  ++   
Sbjct: 743 LKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ 802

Query: 578 SWKK 581
           S K+
Sbjct: 803 SLKQ 806



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 1/168 (0%)

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            FS ++  Y R GQL   LK+   M+   + PN+      I+   + NRL  A RFL+++
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +   +VP    YN +I G+C    V+EA  ++ +M  K C PDKV++  ++   C + R+
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363

Query: 524 VEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           VE   +  KM +  G  PD +T N+LI  L K    +EA   ++ A E
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE 411



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 83/180 (46%)

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            + Y  D + + S+++   +        ++   MK + +      F+ ++ +  +  +L 
Sbjct: 200 QWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLR 259

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA + L  ++   + P   + N  ID F +A  +++A   +  M+     P+ VT+  +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G+C   R+ EAI +   M   GC PD ++  +++  L K     E   +M++ +++  L
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 205/422 (48%), Gaps = 4/422 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T +++M SLC+ G     + VFD M   G  P+       ++     G       L    
Sbjct: 329 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 388

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + +N L+ A       D+A+ +F E      +PD  T+  +I  L RIG++
Sbjct: 389 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 448

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   G +PD   YN LI G C    + +  EL+ E+   +    D+V ++S
Sbjct: 449 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI-MNNGMHLDIVFFSS 507

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CKLG++  A  I++   + G+ P AV +N+L+DG+  VG M  A  + + M+S G
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV + +L++GYC+ G++++GL L  EM  + + P+   ++I+I+ L +  R   A+
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  + +      YN V+ G  K    DEA  +  E+     K + +T   +I G 
Sbjct: 628 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
               R+ EA  +F  + R    P  +T + +I+ L+K G+  EA   F  MQ A  + N 
Sbjct: 688 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 747

Query: 575 QL 576
           +L
Sbjct: 748 RL 749



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 194/435 (44%), Gaps = 36/435 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +Y+++++SLC+ G       +   M   G +  PN       +    + G  + A  L  
Sbjct: 187 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 246

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +      YNS+++AL K    D+A    ++       P+ WT+N LI G S  G
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 306

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-------- 327
           + K+A   F +M      PD+VT + L+  LC+  ++    ++   +  K +        
Sbjct: 307 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 366

Query: 328 --------------------------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                                      +PD  T+  +I  Y   G +DKA  I+NEM   
Sbjct: 367 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 426

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+KP  VT+  +I    ++G M  A     +M+  G  PD   ++ LI G+C +G L + 
Sbjct: 427 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 486

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +L  E+    +  ++  F+ +IN LCK  R+ DA+          L P   +YN ++DG
Sbjct: 487 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 546

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +C  G +++A  +   M     +P+ V +  L+ G+C  GR+ E +S+F +ML+ G  P 
Sbjct: 547 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 606

Query: 542 DITVNSLISCLLKGG 556
            I  + +I  L + G
Sbjct: 607 TILYSIIIDGLFEAG 621



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 209/442 (47%), Gaps = 7/442 (1%)

Query: 127 LEVIKRLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRS 184
           ++   R   P+L L F  +  R  L +N      N ++   CE    D ++ ++      
Sbjct: 121 MDCCTRAHRPELALAFFGQLLRTGLRVN--IIIANHLLEGFCEAKRTDEALDILLHRTPE 178

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNA 242
            G +P+       + S    GK   A  LL     G    S     YN++++   K+ + 
Sbjct: 179 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 238

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++A  +FKE  +    PD  T+N ++  L +   + KA  F   M +    P+  TYN L
Sbjct: 239 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G     +      + KE++ +    PDVVT + ++   CK GK+ +A  +++ M   G
Sbjct: 299 IYGYSSTGQWKEAVRVFKEMR-RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 357

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P   ++N++++G+   G +V    + + ML  G  PD  TF+ LI  Y   G L++ +
Sbjct: 358 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 417

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM+   + P+V T+  +I ALC+  +++DA     Q+    + P  + YN +I GF
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 477

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G++ +A  +++E+       D V F+ +I   C  GR+++A +IF+  + +G  PD 
Sbjct: 478 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 537

Query: 543 ITVNSLISCLLKGGMPNEAFRI 564
           +  N L+      G   +A R+
Sbjct: 538 VVYNMLMDGYCLVGKMEKALRV 559



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 177/365 (48%), Gaps = 4/365 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-Y 247
           P S      +  C RA + + A     Q     + ++  + N LL    +    DEA+  
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISG 305
           +      L   PD ++++IL++ L   G+  +A +    M   G  CSP++V YNT+I G
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             +  +V +  +L KE+  +    PD+VTY SV+   CK   MDKA     +M +  + P
Sbjct: 232 FFKEGDVNKACDLFKEM-VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 290

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +  T+N LI G+   G    A  + + M     LPDVVT S L+   C+ G++ +   + 
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 350

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K  +P+V+++ I++N    +  L D       +  + + P  + +N +I  +   
Sbjct: 351 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 410

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D+A +I  EM +   KPD VT+  +I   C  G+M +A+  FN+M+  G APD    
Sbjct: 411 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 470

Query: 546 NSLIS 550
           N LI 
Sbjct: 471 NCLIQ 475



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++      G    +  +FD M  DG  P+       + +    G  D A  + ++ 
Sbjct: 364 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 423

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      Y +++ AL +    D+A+  F +       PD + +N LIQG    G +
Sbjct: 424 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 483

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E   ++ + G   DIV ++++I+ LC++  V     +  ++       PD V Y  
Sbjct: 484 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYNM 542

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC +GKM+KA  +++ M S GI+P+ V +  L++G+ K+G +     +   ML  G
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG 602

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + +S +IDG    G+         EM    ++ ++ T+ I++  L K    ++A 
Sbjct: 603 IKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 662

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+L+  ++       N +IDG  +   V+EA  + A +   R  P  VT++I+I   
Sbjct: 663 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 722

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +G + EA  +F+ M   GC P+   +N ++  LLK
Sbjct: 723 IKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 759



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 186/405 (45%), Gaps = 1/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+ +LC+    D  +     M +   LPN+      +      G+   A  +  + 
Sbjct: 259 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +       + L+ +L K     EA  +F         PD +++NI++ G +  G +
Sbjct: 319 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 378

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               + F  M   G +PD  T+N LI        + +   +  E++      PDVVTY +
Sbjct: 379 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYRT 437

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+  C++GKMD A   +N+M   G+ P    +N LI GF   G+++ A+ +   +++ G
Sbjct: 438 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 497

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+V FSS+I+  C+ G++     + D      L P+   + +L++  C   ++  A 
Sbjct: 498 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 557

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R    +    + P    Y  +++G+CK G +DE   +  EM ++  KP  + ++I+I G 
Sbjct: 558 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 617

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              GR V A   F++M   G A D  T N ++  L K    +EA 
Sbjct: 618 FEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 662



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 190/410 (46%), Gaps = 1/410 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F T+N+++++    G+ D   ++F+ MR  G  P+       +++  R GK D A    +
Sbjct: 397 FYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 456

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           Q     V    + YN L+       +  +A  +  E        D   F+ +I  L ++G
Sbjct: 457 QMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 516

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V  A   F    + G  PD V YN L+ G C V ++ +   +  +    +   P+VV Y
Sbjct: 517 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVGY 575

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++++GYCK+G++D+   ++ EM   GIKPS + ++++IDG  + G  V A+     M  
Sbjct: 576 GTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTE 635

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D+ T++ ++ G  +N   ++ + L  E++  N+  N+ T   +I+ + +  R+ +
Sbjct: 636 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 695

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+     +  + LVP    Y+ +I    K G V+EA  + + M+   C+P+      ++ 
Sbjct: 696 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 755

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
               K  +V A +  +K+     + + +T   L+      G   E  R +
Sbjct: 756 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 2/308 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P + T+ IL+   +R    + A  FF  +   G   +I+  N L+ G C         ++
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI--KPSAVTFNVLIDG 376
           L     +    PDV +Y+ ++   C  GK  +A  +   M   G    P+ V +N +IDG
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G++  A  + + M+  G  PD+VT++S++   C+   +++      +M  K + PN
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +T+  LI       +  +A R  K+++ + ++P     + ++   CK G + EA  +  
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K   PD  ++ I++ G+  KG +V+   +F+ ML  G APD  T N LI      G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 557 MPNEAFRI 564
           M ++A  I
Sbjct: 412 MLDKAMII 419



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
            SP   TY  ++    +  + + A   + ++   G++ + +  N L++GF +      A 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILI 444
           + +  R    G +PDV ++S L+   C  G+  Q   L   M   G   SPNV  +  +I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +   KE  +N A    K++    + P    YN V+   CKA  +D+A   + +M  KR  
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           P+  T+  LI G+   G+  EA+ +F +M R    PD +T++ L+  L K G   EA
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 10/274 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN+ L+     YN++M   C +G  +    VFD M S G  PN       V+   + G+ 
Sbjct: 529 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 588

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    L  +     +  ST +Y+ +++ L +      A   F E        D  T+NI+
Sbjct: 589 DEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIV 648

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++GL +     +A   F ++ +     +I+T NT+I G+ +   V    +L   +  +S 
Sbjct: 649 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS-RSR 707

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
             P VVTY+ +I+   K G +++A  +++ M + G +P++   N ++    K   +V A 
Sbjct: 708 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAG 767

Query: 387 ---EYMRERMLSFGYLPDVV---TFSSLIDGYCR 414
                + ER  S  +L  ++    FSS   G CR
Sbjct: 768 AYLSKIDERNFSLEHLTAMLLVDLFSS--KGTCR 799



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 3/207 (1%)

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P++ T+ +L+D   +      A     ++L  G   +++  + L++G+C   + ++ L
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 423 K-LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV--PKPFMYNPVI 479
             L          P+V++++IL+ +LC + +   A   L+ +     V  P    YN VI
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DGF K G+V++A  +  EM ++   PD VT+  ++   C    M +A +   +M+     
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
           P++ T N+LI      G   EA R+ +
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFK 316


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 212/423 (50%), Gaps = 6/423 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN ++  L + G  D   + +  M      P++      +++  +A   D A  +L+  
Sbjct: 13  SYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM 72

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  + F YNS+++       +++A+ +F++      +PD  T+N L+  L + G+ 
Sbjct: 73  ----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A + F  M   G  PDI TY TL+ G      +   H+LL  +  ++    D   +  
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLA-LMVQNGMQLDHHVFNI 187

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y K  K+D+   ++++M   G+ P+AV +  +IDG  K+G +  A    E+M+  G
Sbjct: 188 LICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKG 247

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV ++SLI   C   +  +  +L  E+  + ++PN+  F  ++++LCKE R+ +++
Sbjct: 248 LTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESK 307

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    L    + P    Y+ +IDG+C AG +D A  ++  M     KPD VT++ LI G+
Sbjct: 308 KLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGY 367

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED-QNLQL 576
           C   RM +A+++F +M   G  PD IT N ++  L +      A  +  R +E    L+L
Sbjct: 368 CKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLEL 427

Query: 577 PSW 579
            ++
Sbjct: 428 STY 430



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 160/306 (52%), Gaps = 5/306 (1%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  ++N +I GL + G+V KA+  +++M     SPD VTYN++I+ L +   + R  E+
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +       P+  TY S++ GYC  G+ +KA GI+ +M S GI+P  VT+N L+D   
Sbjct: 69  LTVMVM-----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G    A  + + M+  G  PD+ T+ +L+ GY   G L +   L   M    +  + +
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            F ILI A  K+ ++++      +++   L P    Y  VIDG CK G +D+A +   +M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            +K   P+ V +T LI   C   +  +A  +  ++L  G  P+ +  N+++  L K G  
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303

Query: 559 NEAFRI 564
            E+ ++
Sbjct: 304 IESKKL 309



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 169/358 (47%), Gaps = 1/358 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M   C  G  +    +F  M SDG  P+       +    + GKC  A+ +    
Sbjct: 79  TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +LL+    +    E   +     +   Q D   FNILI   ++  +V
Sbjct: 139 VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKV 198

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +    F  M   G +P+ V Y T+I GLC++  +       +++  K   +P+VV YTS
Sbjct: 199 DEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKG-LTPNVVVYTS 257

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C   K +KA  +  E+   GI P+ V FN ++D   K G ++ ++ + + +   G
Sbjct: 258 LIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIG 317

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV+T+S+LIDGYC  G+++  +KL   M    L P+  T++ LIN  CK NR+ DA 
Sbjct: 318 VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDAL 377

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
              K+++ N + P    YN ++ G  +      A  + A + E   + +  T+ I+++
Sbjct: 378 ALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILM 435



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 162/331 (48%), Gaps = 1/331 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M  LC+ G     + +FD M   G  P+       +      G       LL+  
Sbjct: 114 TYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALM 173

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +   ++N L+ A  KQ   DE V +F +  +    P+   +  +I GL ++G +
Sbjct: 174 VQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRL 233

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  M   G +P++V Y +LI  LC  ++  +  EL+ E+      +P++V + +
Sbjct: 234 DDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEI-LDQGINPNIVFFNT 292

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++   CK G++ ++  +++ +   G+ P  +T++ LIDG+   G M  A  +   M+S G
Sbjct: 293 ILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG 352

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD VT+S+LI+GYC+  ++   L L  EM+   ++P++ T+ I+++ L +  R   A+
Sbjct: 353 LKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAK 412

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
               ++  +    +   YN ++  F K  ++
Sbjct: 413 ELYARITESGTQLELSTYNIILMDFAKTNSL 443



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 145/311 (46%), Gaps = 7/311 (2%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S V   L     TY  ++      G    +  +   M  +G   +  +    + +  +  
Sbjct: 137 SMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQE 196

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           K D    + S+ R   +T +   Y ++++ L K    D+A+  F++       P+   + 
Sbjct: 197 KVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYT 256

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEV 322
            LI  L    + +KA E  +++   G +P+IV +NT++  LC   RV E  +  +LL  +
Sbjct: 257 SLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHI 316

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                 +PDV+TY+++I GYC  GKMD A  +   M S G+KP +VT++ LI+G+ K+  
Sbjct: 317 G----VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINR 372

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  A  + + M S G  PD++T++ ++ G  R  +     +L   +        + T+ I
Sbjct: 373 MEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNI 432

Query: 443 LINALCKENRL 453
           ++    K N L
Sbjct: 433 ILMDFAKTNSL 443



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 110/226 (48%), Gaps = 1/226 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  V+  LC++G  D   + F+ M   G  PN  +    + +     K + A+ L+ +  
Sbjct: 220 YRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEIL 279

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +   +N++L++L K+    E+  +F     +   PD  T++ LI G    G++ 
Sbjct: 280 DQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMD 339

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A +    M S G  PD VTY+TLI+G C++N +     L KE++  +  +PD++TY  +
Sbjct: 340 GAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEME-SNGVNPDIITYNII 398

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           + G  +  +   A  +Y  +   G +    T+N+++  F K  +++
Sbjct: 399 LHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLM 444



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 5/221 (2%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           ++ L  + RLD+  L  +      ++  L  +   Y  ++ +LC     +  + +   + 
Sbjct: 224 IDGLCKLGRLDDAMLNFE----QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEIL 279

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
             G  PN       + S  + G+   +K L        V      Y++L++        D
Sbjct: 280 DQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMD 339

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A+ +      +  +PD+ T++ LI G  +I  ++ A   F +M S G +PDI+TYN ++
Sbjct: 340 GAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIIL 399

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            GL R    A   EL   +  +S    ++ TY  ++  + K
Sbjct: 400 HGLFRTRRTAAAKELYARIT-ESGTQLELSTYNIILMDFAK 439



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           L F  ++  +N +   +N ++ SLC+ G     + +FD +   G  P+       +    
Sbjct: 274 LIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYC 333

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
            AGK D A  LL+      +   +  Y++L+N   K N  ++A+ +FKE       PD  
Sbjct: 334 LAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDII 393

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
           T+NI++ GL R      A E +  +   G   ++ TYN ++    + N +
Sbjct: 394 TYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSL 443



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 38/67 (56%)

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           ++ RC PD V++  +I G   +G + +A   +++ML    +PD +T NS+I+ L K    
Sbjct: 3   DDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAM 62

Query: 559 NEAFRIM 565
           + A  ++
Sbjct: 63  DRAMEVL 69


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 200/412 (48%), Gaps = 21/412 (5%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           +++ LCEMG+   V   F   R  G   +  +    V +  + GK + A  LL++ +   
Sbjct: 373 ILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRR 432

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +++    Y +L+     Q    +A  MF+E      +PD  T+NIL+ G SR G  K+A 
Sbjct: 433 MSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEAL 492

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           E    +G+ G  P+  T+N +I GLC   +V      L  ++ K      +  Y++++ G
Sbjct: 493 ELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKC-----LENYSAMVDG 547

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YCK     KA  +++ ++  GI     +   L+      G    A  + ERML+    P+
Sbjct: 548 YCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPN 607

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
            + +  LI  +CR+G + +   + D +  + ++P+V T+T++IN  C+ N L +AR    
Sbjct: 608 QIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFN 667

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKA------------GNVDE---ANVIVAEMEEKRCKPD 506
            +K   + P    Y  V+DG  K             G+ +E   A+   +EM+E   KPD
Sbjct: 668 DMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPD 727

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI-SCLLKGGM 557
            V +T+LI  HC    + +AI+++++M+  G  PD +T  +L+ SC  +G M
Sbjct: 728 VVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDM 779



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 211/463 (45%), Gaps = 31/463 (6%)

Query: 127 LEVIKRLDN-PKLGLKFLEFSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQ-------- 176
           +E+   L N P L   F  F+++  S   H+  TY  ++R LC   L   +Q        
Sbjct: 67  VEIFYNLKNEPNLAWSF--FTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVG 124

Query: 177 -----------VVFDYMRSDGHLPNSP-------MIEFFVSSCIRAGKCDAAKGLLSQFR 218
                       +FD +R  G             +++  V + +R G  D A   L Q +
Sbjct: 125 SKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTK 184

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                      N L+N L++    D AV +++   RL   P+ +T+ I I+ L R G  +
Sbjct: 185 RRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFE 244

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A + F +M   G +P+ VT +T I GLC       G+E L+ ++  + +  D   YT+V
Sbjct: 245 EAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALR-AANWPIDTFAYTAV 303

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+C   K+ +A  ++ +M + GI P    +  LI  + K GN++ A  +   M+S G 
Sbjct: 304 IRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGI 363

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
             + V  SS++   C  G  ++ +    E +   +  +   + I+++ALCK  ++ +A  
Sbjct: 364 KTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVE 423

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L ++K   +      Y  +I G+C  G + +A  +  EM+E+  +PD VT+ IL+ G  
Sbjct: 424 LLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFS 483

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             G   EA+ + + +   G  P+  T N +I  L   G   EA
Sbjct: 484 RNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA 526



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 156/347 (44%), Gaps = 22/347 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++      GL      + D + + G  PNS      +     AGK   A+  L+  
Sbjct: 474 TYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL 533

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y+++++   K N   +A  +F    +        +   L+  L   GE 
Sbjct: 534 EDKCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEY 589

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      M +    P+ + Y  LI   CR  ++ R  +L+ ++  +   +PDV+TYT 
Sbjct: 590 DKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRA-QLVFDMLVERGITPDVITYTM 648

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR------- 390
           +I+GYC++  + +A  I+N+M   GIKP  +T+ V++DG  KV N+  A  ++       
Sbjct: 649 MINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKV-NLKMARSLQFSKGSEE 707

Query: 391 ---------ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
                      M   G  PDVV ++ LID +C+   L   + L DEM  + L P++ T+T
Sbjct: 708 EKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYT 767

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
            L+++ C    ++ A   + ++ +  + P     + +  G  KA  V
Sbjct: 768 ALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKV 814



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 115/270 (42%), Gaps = 14/270 (5%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
            + Y+ ++   C+         +F  +   G L         +SS    G+ D A  LL 
Sbjct: 538 LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLE 597

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +    +V  +  MY  L+ A  +  +   A  +F         PD  T+ ++I G  R+ 
Sbjct: 598 RMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVN 657

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN-EVARG--------HELLKEVKFKS 326
            +++A + F DM   G  PD++TY  ++ G  +VN ++AR          E +    F S
Sbjct: 658 CLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWS 717

Query: 327 E-----FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           E       PDVV YT +I  +CK   +  A  +Y+EM + G++P  VT+  L+      G
Sbjct: 718 EMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRG 777

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
           +M  A  +   M   G  PD    S L  G
Sbjct: 778 DMDRAITLVNEMSFKGIEPDSRAMSVLHRG 807


>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 193/398 (48%), Gaps = 7/398 (1%)

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA----KGLLSQFR 218
           +R +CE GL +     FD ++  G+ P      F   SC++ G+ D      +G++    
Sbjct: 198 IRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGV 257

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +V + T  Y  L+ A    N    A  + ++       P    FN LI G  +     
Sbjct: 258 QKDVDIETVGY--LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHH 315

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +  E  + M     +PDI TY  +I+G C+     +  E+   +K +  ++PD+V YT++
Sbjct: 316 RVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRG-YAPDMVMYTTL 374

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK+G+++ A+ ++ EM   G  P+  ++N LI GF K+GN+  A  + ++ML  GY
Sbjct: 375 IHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGY 434

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
               ++ ++LI G C +G+ ++      EM  KN+  +V T+  LI   C+E ++  +  
Sbjct: 435 KETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTD 494

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            LK+L+   L P    Y  +I   C+ G+V EA  +  +M  +  +P   T   +I G C
Sbjct: 495 LLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLC 554

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            +G +VE +     ML+    P   T   LI  L++ G
Sbjct: 555 EQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQIG 592



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 164/378 (43%), Gaps = 10/378 (2%)

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLS--QFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           LP+         + + A  C  AK  L   +F P   ++  ++       LV     +EA
Sbjct: 156 LPHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLV-----EEA 210

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD--IVTYNTLI 303
           VY F        +P   T+N   Q   + G     ++ +  M   G   D  I T   LI
Sbjct: 211 VYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLI 270

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
              C  N+V+R +E+L++   +   +P    +  +ISG+CK     +   + + M     
Sbjct: 271 QAFCNDNKVSRAYEILRQ-SLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNR 329

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   T+  +I+GF K    + A  +   +   GY PD+V +++LI G+C+ GQL    K
Sbjct: 330 NPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASK 389

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM  K   PN Y++  LI   CK   L++A +  K++  +         N +I G C
Sbjct: 390 LWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLC 449

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             G  DEA     EM  K    D +T+  LI G C +G+++++  +  ++   G  P   
Sbjct: 450 LHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTS 509

Query: 544 TVNSLISCLLKGGMPNEA 561
           +   LI  L + G   EA
Sbjct: 510 SYAHLIQKLCQLGSVQEA 527



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 150/342 (43%), Gaps = 20/342 (5%)

Query: 231 SLLNALVKQNNADEAVYMFKEYF-RLYSQPDTW----TFNILIQGLSRIGEVKKAFEFFY 285
           S  + L+KQ N    V++   +F  L SQP+      + N L   L        A  F Y
Sbjct: 127 SFFSELLKQLNN---VFLSLRFFLWLSSQPEFLPHPVSCNKLFDALLEAKACVPAKSFLY 183

Query: 286 DMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
              SF  SP+  +    I  +C    V E     ++LKE  ++    P V T+       
Sbjct: 184 ---SFEFSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYR----PYVETWNFAFQSC 236

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSA--VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
            K G+ D    +Y  M   G++      T   LI  F     +  A  +  + L  G  P
Sbjct: 237 LKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTP 296

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
               F+ LI G+C+    ++ L+L   M  KN +P+++T+  +IN  CK      A    
Sbjct: 297 CNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVF 356

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
             LK     P   MY  +I GFCK G +++A+ +  EM +K   P++ ++  LI G C  
Sbjct: 357 NALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKI 416

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           G + EA+ ++ KML  G     ++ N+LI  L   G  +EA+
Sbjct: 417 GNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAY 458



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 1/260 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C+  +      VF+ ++  G+ P+  M    +    + G+ + A  L  + 
Sbjct: 335 TYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEM 394

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + + YN+L+    K  N DEA+ ++K+      +  T + N LI GL   G  
Sbjct: 395 IDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRT 454

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A++FF +M       D++TYNTLI G CR  +V +  +LLKE++ K    P   +Y  
Sbjct: 455 DEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKG-LQPSTSSYAH 513

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C+LG + +A  ++N+M++ G++P   T + +I G  + G +V        ML   
Sbjct: 514 LIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSN 573

Query: 398 YLPDVVTFSSLIDGYCRNGQ 417
             P   TF  LI    + G+
Sbjct: 574 LKPQKETFYKLIQSLIQIGK 593



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 6/276 (2%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P  V+ N L   L            L    +  EFSP+  +  + I   C+ G +++A  
Sbjct: 157 PHPVSCNKLFDALLEAKACVPAKSFL----YSFEFSPEPASLENYIRCVCEGGLVEEAVY 212

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV--VTFSSLIDG 411
            ++ +   G +P   T+N       K G       + E M+  G   DV   T   LI  
Sbjct: 213 TFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQA 272

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           +C + ++++  ++  +     L+P    F  LI+  CKE   +     +  +   +  P 
Sbjct: 273 FCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPD 332

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
            F Y  +I+GFCK     +A  +   ++++   PD V +T LI G C  G++ +A  ++ 
Sbjct: 333 IFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWF 392

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +M+  G  P++ + N+LI    K G  +EA ++ ++
Sbjct: 393 EMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKK 428


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 1/388 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           V+  LC+   + S       M S    P+  ++   V    + GK   A  L  +     
Sbjct: 401 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
              S    N+L++ L       EA  + KE        D  T+N LI G    G+V+  F
Sbjct: 461 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 520

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M   G  PDI TYN L+ GLC V ++    +L  E K  S    ++ TY  ++ G
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK-ASGLISNIHTYGIMMEG 579

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YCK  +++    ++NE+ S  ++ +++ +N++I    + GN+ +A  + E M S G LP+
Sbjct: 580 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 639

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T+SSLI G C  G +     L DEM+ +   PNV  +T LI   CK  +++ A     
Sbjct: 640 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 699

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++   ++ P  F Y  +IDG+CK GN+++AN ++ +M+E    PD VT+ +L  G C   
Sbjct: 700 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 759

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLI 549
            M  A  + ++M   G   D+IT  +L+
Sbjct: 760 DMDNAFKVCDQMATEGLPVDEITYTTLV 787



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 176/344 (51%), Gaps = 8/344 (2%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           N  L++LVK N  ++      E FR+ S+   PD ++F  +I  L + G+++ A E F  
Sbjct: 190 NFXLSSLVKANEFEKCC----EVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMK 245

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G SP++VTYN +I+GLC+   +    EL +++  K    P++ TY ++I+G  KL 
Sbjct: 246 MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG-VQPNLKTYGALINGLIKLN 304

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
             DK   I +EM   G  P+ V FN LIDG+ K+GN+  A  +++ M+S    P  VT  
Sbjct: 305 FFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLY 364

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           SL+ G+C++ Q+       +E+    LS +      +++ LCK+ R + A RF K +   
Sbjct: 365 SLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSR 424

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           +  P   +   ++ G CK G   EA  +   + EK     KVT   LI G C  G++ EA
Sbjct: 425 NFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 484

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             I  +ML  G   D IT N+LI      G     FR+ +  ++
Sbjct: 485 SRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 8/363 (2%)

Query: 210 AKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            K +LS+ FRP ++ ++      L+  L K     EA  ++       S     T N LI
Sbjct: 418 TKMMLSRNFRPSDLLLTM-----LVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALI 472

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL   G++ +A     +M   G   D +TYN LI G C   +V  G   L+E   K   
Sbjct: 473 HGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV-EGCFRLREEMTKRGI 531

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD+ TY  ++ G C +GK+D A  +++E  + G+  +  T+ ++++G+ K   +   E 
Sbjct: 532 QPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVEN 591

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   +LS     + + ++ +I  +C+NG +   L+L + MK K + PN  T++ LI+ +C
Sbjct: 592 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 651

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
               + DA+  + +++    VP    Y  +I G+CK G +D A     EM      P+K 
Sbjct: 652 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 711

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM-QR 567
           T+T++I G+C  G M +A ++  KM   G  PD +T N L +   K    + AF++  Q 
Sbjct: 712 TYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 771

Query: 568 ASE 570
           A+E
Sbjct: 772 ATE 774



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 188/387 (48%), Gaps = 2/387 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           VF  +   G  P+     F +SS ++A + +    +      G      F + +++NAL 
Sbjct: 173 VFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALC 231

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K    + A+ +F +  +L   P+  T+N +I GL + G +  AFE    M   G  P++ 
Sbjct: 232 KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLK 291

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY  LI+GL ++N   + + +L E+   + F+P+VV + ++I GYCK+G ++ A  I + 
Sbjct: 292 TYGALINGLIKLNFFDKVNHILDEM-IGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDV 350

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M S  I P++VT   L+ GF K   +  AE   E +LS G         S++   C+  +
Sbjct: 351 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR 410

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
            +   +    M  +N  P+    T+L+  LCK+ +  +A     +L            N 
Sbjct: 411 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 470

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I G C AG + EA+ IV EM E+    D++T+  LI+G C +G++     +  +M + G
Sbjct: 471 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 530

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRI 564
             PD  T N L+  L   G  ++A ++
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKL 557



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 184/376 (48%), Gaps = 5/376 (1%)

Query: 145 FSRVNLSLNHSFKTYNLVMR----SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           F    + L+ +F+  +L++      LC+ G H     ++  +   G   +       +  
Sbjct: 415 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHG 474

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
              AGK   A  ++ +     + M    YN+L+     +   +    + +E  +   QPD
Sbjct: 475 LCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 534

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            +T+N L++GL  +G++  A + + +  + G   +I TY  ++ G C+ N +     L  
Sbjct: 535 IYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFN 594

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+    +   + + Y  +I  +C+ G +  A  +   M S GI P+  T++ LI G   +
Sbjct: 595 EL-LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNI 653

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A+++ + M   G++P+VV +++LI GYC+ GQ++       EM   N+ PN +T+
Sbjct: 654 GLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 713

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           T++I+  CK   +  A   L ++K + +VP    YN + +GFCKA ++D A  +  +M  
Sbjct: 714 TVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMAT 773

Query: 501 KRCKPDKVTFTILIIG 516
           +    D++T+T L+ G
Sbjct: 774 EGLPVDEITYTTLVHG 789



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 202/448 (45%), Gaps = 34/448 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++  V+ +LC+ G  ++   +F  M   G  PN       ++   + G+ D A  L  + 
Sbjct: 222 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 281

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y +L+N L+K N  D+  ++  E       P+   FN LI G  ++G +
Sbjct: 282 TVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNI 341

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--------------- 322
           + A +    M S   +P  VT  +L+ G C+ +++      L+E+               
Sbjct: 342 EGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSV 401

Query: 323 ------KFKSE-------------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                 KF+               F P  +  T ++ G CK GK  +AT ++  +   G 
Sbjct: 402 VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS 461

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
             S VT N LI G    G +  A  + + ML  G   D +T+++LI G+C  G++    +
Sbjct: 462 PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR 521

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L +EM  + + P++YT+  L+  LC   +L+DA +   + K + L+     Y  +++G+C
Sbjct: 522 LREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYC 581

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           KA  +++   +  E+  K+ + + + + I+I  HC  G +  A+ +   M   G  P+  
Sbjct: 582 KANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCA 641

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASED 571
           T +SLI  +   G+  +A  ++    ++
Sbjct: 642 TYSSLIHGVCNIGLVEDAKHLIDEMRKE 669



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 163/326 (50%), Gaps = 2/326 (0%)

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           AV +F    R  + P   T N  +  L +  E +K  E F  M    C PD+ ++  +I+
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVIN 228

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
            LC+  ++    EL  +++ K   SP+VVTY  +I+G C+ G++D A  +  +M   G++
Sbjct: 229 ALCKGGKMENAIELFMKME-KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQ 287

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+  T+  LI+G  K+       ++ + M+  G+ P+VV F++LIDGYC+ G +   LK+
Sbjct: 288 PNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKI 347

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            D M  KN++P   T   L+   CK +++  A   L+++  + L   P     V+   CK
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 407

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
                 A      M  +  +P  +  T+L+ G C  G+ +EA  ++ ++L  G     +T
Sbjct: 408 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT 467

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASE 570
            N+LI  L   G   EA RI++   E
Sbjct: 468 SNALIHGLCGAGKLPEASRIVKEMLE 493


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 202/445 (45%), Gaps = 31/445 (6%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +FK+Y+LV+  L           VF  M S G  P        + +     + D+A  LL
Sbjct: 182 TFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLL 241

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
                     ++ +Y +L++AL ++N   EA+ + +E F +   PD  TFN +I GL ++
Sbjct: 242 RDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKV 301

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN------------------------ 310
            ++  A +    M   G  PD +TY  L+ GLCR+                         
Sbjct: 302 NKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLI 361

Query: 311 -------EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                  ++      L E      F PD+ TY  ++ G CK G +  A  + NEM+  G 
Sbjct: 362 NGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGC 421

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           +P+ +T+ +L++G  K G +  A  +   M + G   + V ++ LI   CR  +++  L 
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  EM  K   P+++T+  LI  LCK +R+++A R    +  +  V     YN +I    
Sbjct: 482 LLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL 541

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           + G   +A  +V +M  + C  DK+T+  LI   C  G + + + ++ +M+  G   D I
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTI 601

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRA 568
           + N +I+ L K G  + AF  ++ A
Sbjct: 602 SCNIMINGLCKVGKVDNAFEFLRDA 626



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 209/431 (48%), Gaps = 35/431 (8%)

Query: 157 KTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +T+N V+  LC++  +HD+ ++V D M   G  P++    F +    R GK + A+ +L 
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLV-DRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI 347

Query: 216 QFR-PGEVTMST-------------------------------FMYNSLLNALVKQNNAD 243
           +   P    ++T                               F YN L++ L K+ +  
Sbjct: 348 KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
            A  +  E  R   +P+  T+ IL+ GL + G +++A    ++M + G + + V YN LI
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             LCR  +V     LL E+  K    PD+ TY S+I G CK+ ++D+A  +++ M   G 
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKG-CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
             + VT+N LI    + G    A  +   ML  G   D +T++ LI  +C+ G + +GL+
Sbjct: 527 VANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L ++M    L  +  +  I+IN LCK  ++++A  FL+       VP    YN V++G C
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC 646

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G + EA  +   ++ +  +PD  T+   I   C +G + +A S F + +  G  P ++
Sbjct: 647 KVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNL 706

Query: 544 TVNSLISCLLK 554
           T N L+  LLK
Sbjct: 707 TWNVLVYTLLK 717



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 189/358 (52%), Gaps = 3/358 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FL  + +N        TYN++M  LC+ G     + + + M   G  PN       V+  
Sbjct: 376 FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            +AG  + A  +L +     +T+++ +YN L+ AL ++     A+ +  E      +PD 
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           +T+N LI GL ++  + +AF  F++M   G   + VTYNTLI  L R     +   L+ +
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           + F+   + D +TY  +I  +CK+G ++K   +Y +M   G+    ++ N++I+G  KVG
Sbjct: 556 MLFRG-CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614

Query: 382 NMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
            + +A E++R+  ++ G++PD+VT++S+++G C+ G++ + L L D ++ + + P+ +T+
Sbjct: 615 KVDNAFEFLRDA-INRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
              I+  CKE  +NDA  F  +   N  VP    +N ++    K  N +    ++ E+
Sbjct: 674 NTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 196/408 (48%), Gaps = 1/408 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C+ G         + ++  G LP        ++   +AG+ +A   LL++  
Sbjct: 243 YNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMA 302

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + M+  ++N++++A  K     EA  M +    +   PD  T+NI+I    + G ++
Sbjct: 303 ARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIE 362

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A E        G  P+  +Y  L+   C+  +  +   +L  +    E S D+V+Y + 
Sbjct: 363 EADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKS-DLVSYGAF 421

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G    G++D A  +  +M   G+ P A  +N+L+ G  K G + + + +   ML    
Sbjct: 422 IHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNV 481

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PDV  F++LIDG+ RNG+L++ +K+   +  K + P +  +  +I   CK  ++ DA  
Sbjct: 482 QPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALS 541

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L ++      P  + Y+ VIDG+ K  ++  A  +  +M + + KP+ +T+T LI G C
Sbjct: 542 CLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFC 601

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            K  M+ A  +F+ M      P+ +T  +L+    K G P  A  I +
Sbjct: 602 KKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFE 649



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 216/448 (48%), Gaps = 15/448 (3%)

Query: 129 VIKRLDNPKLGLKFLEFSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           VI R+ + +LGLKF +++     S +     ++ +++ L    +   +++V + M++   
Sbjct: 67  VIDRVHDAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHL 126

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMY-NSLLNALVKQNNADEAV 246
            P        + +   +G  D A  L    R       TF+  N LLN LVK    D A+
Sbjct: 127 KPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVAL 186

Query: 247 YMFKEYFR----LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            ++ +  +      +  D +T +I+++GL  +G++++            C P +V YN +
Sbjct: 187 QLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMI 246

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G C+  ++      L E+K K    P V TY ++I+G+CK G+ +    +  EM + G
Sbjct: 247 IDGYCKKGDLQCATRALNELKMKGVL-PTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  +   FN +ID   K G +  A  M  RM   G  PD+ T++ +I+  C+ G++ +  
Sbjct: 306 LNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEAD 365

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL----KWNDLVPKPFMYNPV 478
           +L ++ K + L PN +++T L++A CK+     A   L ++    + +DLV     Y   
Sbjct: 366 ELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVS----YGAF 421

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I G   AG +D A ++  +M EK   PD   + IL+ G C KGR+     + ++ML    
Sbjct: 422 IHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNV 481

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQ 566
            PD     +LI   ++ G  +EA +I +
Sbjct: 482 QPDVYVFATLIDGFIRNGELDEAIKIFK 509



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 189/430 (43%), Gaps = 15/430 (3%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           LN + K +N V+ +  + GL      +   M   G  P+       ++   + G+ + A 
Sbjct: 306 LNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEAD 365

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            LL + +   +  + F Y  L++A  K+ +  +A  M      +  + D  ++   I G+
Sbjct: 366 ELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGV 425

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              GE+  A      M   G  PD   YN L+SGLC+   +     LL E+       PD
Sbjct: 426 VVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEM-LDRNVQPD 484

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V  + ++I G+ + G++D+A  I+  +   G+ P  V +N +I GF K G M  A     
Sbjct: 485 VYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 544

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M S  + PD  T+S++IDGY +   ++  LK+  +M      PNV T+T LIN  CK+ 
Sbjct: 545 EMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA 604

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            +  A +    +K  DLVP    Y  ++ GF KAG  + A  I   M    C P+  TF 
Sbjct: 605 DMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFH 664

Query: 512 ILIIGHCMKGR---MVEA-----------ISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
            LI G         ++E            +  F  ML  G        NS+I CL K G 
Sbjct: 665 YLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGT 724

Query: 558 PNEAFRIMQR 567
            + A  ++ +
Sbjct: 725 VDTAQLLLTK 734



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 198/446 (44%), Gaps = 51/446 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL-------PNSPMIEF--FVSSCIRAGKCD 208
           +Y  +M + C+ G         DY+++ G L         S ++ +  F+   + AG+ D
Sbjct: 382 SYTPLMHAYCKKG---------DYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEID 432

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  +  +     V     +YN L++ L K+        +  E      QPD + F  LI
Sbjct: 433 VALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLI 492

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            G  R GE+ +A + F  +   G  P IV YN +I G C+  ++      L E+      
Sbjct: 493 DGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMN-SVHH 551

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +PD  TY++VI GY K   M  A  ++ +M     KP+ +T+  LI+GF K  +M+ AE 
Sbjct: 552 APDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEK 611

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M SF  +P+VVT+++L+ G+ + G+  +   + + M      PN  TF  LIN L 
Sbjct: 612 VFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLT 671

Query: 449 --------------KENRLNDARRFLKQL---KWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                         KEN  +    F   +    W+ ++     YN VI   CK G VD A
Sbjct: 672 NTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAA---YNSVIVCLCKHGTVDTA 728

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
            +++ +M  K    D V FT L+ G C KG+  E  +I      I C  + I + + +  
Sbjct: 729 QLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNI------ISCDLNKIELQTAVKY 782

Query: 552 ------LLKGGMPNEAFRIMQRASED 571
                  L  G  +EA  I+Q   ED
Sbjct: 783 SLTLDKYLYQGRLSEASVILQTLVED 808


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 192/399 (48%), Gaps = 1/399 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN V+    + G  +    +F  M   G  P+       V +  +A   D A+  L Q 
Sbjct: 221 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQM 280

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  + + YN+L+          EAV +FKE  R    PD  TFN+L+  L + G++
Sbjct: 281 VNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKI 340

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A + F  M   G +PD+ +YN +++G      +    +L  ++      +P + T+  
Sbjct: 341 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF-DLMLGDGIAPVICTFNV 399

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y   G +DKA  I+NEM   G+KP+ +T+  +I    ++G M  A     +M+  G
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD   +  LI G+C +G L +  +L  E+    +  ++  F+ +IN LCK  R+ DA+
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQ 519

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                     L P   +Y+ ++DG+C  G +++A  +   M     +P+ V +  L+ G+
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           C  GR+ E +S+F +ML+ G  P  I  N +I  L + G
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N++M SLC+ G     + VFD M   G  P+       ++     G       L    
Sbjct: 326 TFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      +N L+ A       D+A+ +F E      +P+  T+  +I  L RIG++
Sbjct: 386 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKM 445

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   G +PD   Y+ LI G C    + +  EL+ E+   +    D+V ++S
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI-MNNGMHLDIVLFSS 504

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CKLG++  A  I++   + G+ P+AV +++L+DG+  VG M  A  + + M+S G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V + +L++GYC+ G++++GL L  EM  K + P+   + I+I+ L +  R   A+
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  + +      Y+ V+ G  K    DEA  +  E+     K D +T   +I G 
Sbjct: 625 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGM 684

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRA 568
               R+ EA  +F  + R G  P  +T + +I+ L+K G+  EA   F  MQ A
Sbjct: 685 FQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 178/365 (48%), Gaps = 4/365 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-Y 247
           P S      +  C RA + + A     Q     + +   + N LL    +    DEA+  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISG 305
           +      L   PD ++++IL++ L   G+  +A +    M   G  CSPD+V YNT+I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             +  +V +  +L KE+  +    PD VTY+SV+   CK   MDKA     +M + G+ P
Sbjct: 229 FFKEGDVNKACDLFKEM-VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +  T+N LI G+   G    A  + + M     LPDVVTF+ L+   C+ G++ +   + 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVF 347

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K  +P+V+++ I++N    +  L D       +  + + P    +N +I  +   
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 407

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D+A +I  EM +   KP+ +T+T +I   C  G+M +A+  FN+M+  G APD    
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 546 NSLIS 550
           + LI 
Sbjct: 468 HCLIQ 472



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 221/479 (46%), Gaps = 42/479 (8%)

Query: 127 LEVIKRLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRS 184
           ++   R   P+L L F  +  R  L ++      N +++  CE    D ++ ++      
Sbjct: 118 MDCCTRAHRPELALAFFGQLLRTGLRVD--IIIANHLLKGFCEAKRTDEALDILLHRTPE 175

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNA 242
            G +P+       + S    GK   A  LL     G    S     YN++++   K+ + 
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDV 235

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++A  +FKE  +    PD  T++ ++  L +   + KA  F   M + G  P+  TYN L
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G     +      + KE++ +S   PDVVT+  ++   CK GK+ +A  +++ M   G
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRQS-ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P   ++N++++G+   G +V    + + ML  G  P + TF+ LI  Y   G L++ +
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 414

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM+   + PNV T+T +I ALC+  +++DA     Q+    + P  + Y+ +I GF
Sbjct: 415 IIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474

Query: 483 CKAGNVDEANVIVAEME---------------EKRCK--------------------PDK 507
           C  G++ +A  +++E+                   CK                    P  
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTA 534

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           V +++L+ G+C+ G+M +A+ +F+ M+  G  P+D+   +L++   K G  +E   + +
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 190/407 (46%), Gaps = 1/407 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F TY+ V+ +LC+    D  +     M + G LPN+      +      G+   A  +  
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + R   +      +N L+ +L K     EA  +F         PD +++NI++ G +  G
Sbjct: 314 EMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +    + F  M   G +P I T+N LI        + +   +  E++      P+V+TY
Sbjct: 374 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPNVLTY 432

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           T+VI+  C++GKMD A   +N+M   G+ P    ++ LI GF   G+++ A+ +   +++
Sbjct: 433 TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D+V FSS+I+  C+ G++     + D      L P    +++L++  C   ++  
Sbjct: 493 NGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK 552

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A R    +    + P   +Y  +++G+CK G +DE   +  EM +K  KP  + + I+I 
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 612

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           G    GR V A   F++M   G A +  T + ++  L K    +EA 
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 659



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 187/397 (47%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++      G    +  +FD M  DG  P        + +    G  D A  + ++ 
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V  +   Y +++ AL +    D+A+  F +       PD + ++ LIQG    G +
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E   ++ + G   DIV ++++I+ LC++  V     +  ++       P  V Y+ 
Sbjct: 481 LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPTAVVYSM 539

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC +GKM+KA  +++ M S GI+P+ V +  L++G+ K+G +     +   ML  G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + ++ +IDG    G+         EM    ++ N  T++I++  L K    ++A 
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 659

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+L+  ++       N +I G  +   V+EA  + A +      P  VT++I+I   
Sbjct: 660 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNL 719

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +G + EA  +F+ M   GC PD   +N ++  LLK
Sbjct: 720 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 185/408 (45%), Gaps = 1/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++++    G+ D   ++F+ MR  G  PN       +++  R GK D A    +Q 
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V    + Y+ L+       +  +A  +  E        D   F+ +I  L ++G V
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F    + G  P  V Y+ L+ G C V ++ +   +  +    +   P+ V Y +
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNDVVYGT 574

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYCK+G++D+   ++ EM   GIKPS + +N++IDG  + G  V A+     M   G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +  T+S ++ G  +N   ++ + L  E++  N+  ++ T   +I  + +  R+ +A+
Sbjct: 635 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 694

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  + LVP    Y+ +I    K G V+EA  + + M+   C+PD      ++   
Sbjct: 695 DLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 754

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             K  +V A +  +K+     + + +T   L+      G   E  R +
Sbjct: 755 LKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 2/308 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P + T+ IL+   +R    + A  FF  +   G   DI+  N L+ G C         ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI--KPSAVTFNVLIDG 376
           L     +    PDV +Y+ ++   C  GK  +A  +   M   G    P  V +N +IDG
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G++  A  + + M+  G  PD VT+SS++   C+   +++      +M  K + PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +T+  LI       +  +A R  K+++   ++P    +N ++   CK G + EA  +  
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K   PD  ++ I++ G+  KG +V+   +F+ ML  G AP   T N LI      G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 557 MPNEAFRI 564
           M ++A  I
Sbjct: 409 MLDKAMII 416



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 3/237 (1%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
            SP   TY  ++    +  + + A   + ++   G++   +  N L+ GF +      A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILI 444
           + +  R    G +PDV ++S L+   C  G+  Q   L   M   G   SP+V  +  +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +   KE  +N A    K++    + P    Y+ V+   CKA  +D+A   + +M  K   
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           P+  T+  LI G+   G+  EA+ +F +M R    PD +T N L+  L K G   EA
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA 343



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/343 (21%), Positives = 148/343 (43%), Gaps = 15/343 (4%)

Query: 118 CEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
           C   S L + E+I  + N  + L  + FS +              + +LC++G     Q 
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVLFSSI--------------INNLCKLGRVMDAQN 520

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +FD   + G  P + +    +      GK + A  +        +  +  +Y +L+N   
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K    DE + +F+E  +   +P T  +NI+I GL   G    A   F++M   G + +  
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY+ ++ GL +         L KE++       D++T  ++I+G  +  ++++A  ++  
Sbjct: 641 TYSIVLRGLFKNRCFDEAIFLFKELR-AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 699

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           ++  G+ P  VT++++I    K G +  AE M   M + G  PD    + ++    +  +
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           + +      ++  +N S    T  +L++    +    +  RFL
Sbjct: 760 IVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 19/273 (6%)

Query: 315 GHELLKEVKFKSE--FSPDVVTYTSVI-----SGYCKLGKMDKATGIYNEMNSCG----- 362
            H+LL E++ +       D+  + + I     S  C+ G    A  ++N   S       
Sbjct: 48  AHDLLDELQRRGTPVLERDLNGFLAAIARAPSSAACRSGPA-LAVALFNRAASRAQGPRV 106

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P++ T+ +L+D   +      A     ++L  G   D++  + L+ G+C   + ++ L
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 423 K-LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV--PKPFMYNPVI 479
             L          P+V++++IL+ +LC + +   A   L+ +     V  P    YN VI
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DGF K G+V++A  +  EM ++   PD VT++ ++   C    M +A +   +M+  G  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 540 PDDITVNSLISCLLKGGMPNEAFRI---MQRAS 569
           P++ T N+LI      G   EA R+   M+R S
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 188/372 (50%), Gaps = 7/372 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY- 247
           P+       +S   + G+   A  +    R   +  S   YN+L++   K   A +  + 
Sbjct: 186 PDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHV 245

Query: 248 --MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             + KE  +    P+  TFN+LI G  +   +  A + F +M   G   ++VTY +L+SG
Sbjct: 246 DMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSG 305

Query: 306 LCRVNEVARGHELLKEVKFKSEFS-PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           LCR  +V    +L++E++   E     + T  SV++G+CK G M +A G  + M   G+K
Sbjct: 306 LCREGKVEDSMKLVEEME---ELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMK 362

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ VT+N LIDG+ ++G M  A   +  M   G  PDV T++ LI G+  +        L
Sbjct: 363 PNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGL 422

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEMK   +  ++ T+ +LI ALC +  +  A + L ++    L PK   YN +I+GFC+
Sbjct: 423 LDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCE 482

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G+   A+ I   ME+ + + + VT  + +   C  G+M EA  + N+ML  G  P+ IT
Sbjct: 483 KGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRIT 542

Query: 545 VNSLISCLLKGG 556
              + S +++ G
Sbjct: 543 YEIINSGMIEKG 554



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 174/367 (47%), Gaps = 5/367 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI---RAGKCDAAKGLL 214
           T+N+V+  LC+ G       V   MR  G +P+       +       RAGK      LL
Sbjct: 190 TFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLL 249

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     ++ +   +N L+N   K++N   A+ +F+E  +     +  T+  L+ GL R 
Sbjct: 250 KEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCRE 309

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+V+ + +   +M   G +  + T N++++G C+   +      +  +  K    P+VVT
Sbjct: 310 GKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKG-MKPNVVT 367

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I GY +LGKM +AT     M   GI P   T+N LI GF    +  S   + + M 
Sbjct: 368 YNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMK 427

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   D+VT++ LI   C  G++ + +KL DEM    L P   T+  +IN  C++    
Sbjct: 428 ETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAK 487

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A     +++           N  +  FCK G +DEANV++ EM EK   P+++T+ I+ 
Sbjct: 488 GAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIIN 547

Query: 515 IGHCMKG 521
            G   KG
Sbjct: 548 SGMIEKG 554



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 4/310 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C+     +   VF+ MR  G   N       VS   R GK + +  L+ + 
Sbjct: 263 TFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEM 322

Query: 218 RP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              G  T+ T   NS+LN   K+    EA        +   +P+  T+N LI G  R+G+
Sbjct: 323 EELGLATLPTL--NSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGK 380

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K+A      M   G SPD+ TYN LI+G     +      LL E+K ++    D+VTY 
Sbjct: 381 MKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMK-ETGVKADLVTYN 439

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I   C  G++ KA  + +EM   G++P   T+N +I+GF + G+   A  +R RM   
Sbjct: 440 VLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKC 499

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
               +VVT +  +  +C+ G++++   + +EM  K L PN  T+ I+ + + ++  + D 
Sbjct: 500 KKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDI 559

Query: 457 RRFLKQLKWN 466
           R +   +  N
Sbjct: 560 RGYAADVSKN 569



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 3/184 (1%)

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           Y P   + ++L+    R  +++   +       + +SP+ +TF I+I+ LCK  +L  A 
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAG 208

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCK---AGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              K ++   L+P    YN +IDG+ K   AG +   ++++ EM +    P+ VTF +LI
Sbjct: 209 DVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLI 268

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G+C +  +  AI +F +M + G   + +T  SL+S L + G   ++ ++++   E    
Sbjct: 269 NGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA 328

Query: 575 QLPS 578
            LP+
Sbjct: 329 TLPT 332


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 197/412 (47%), Gaps = 1/412 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++      G    +    D M  +G  P+  +      +  +    D A  +  + R
Sbjct: 310 YGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMR 369

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              ++ +   Y +L++AL K    D+AV  F +       PD + F+ L+ GL  + + +
Sbjct: 370 QQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWE 429

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA E F+++   G   D V +NTL+  LCR   V     L+ ++  +    PDV++Y ++
Sbjct: 430 KAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLI-DLMLRVGVRPDVISYNTL 488

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G+C  G++D+A  + + + S G+KP  VT+N L+ G+ K   +  A  +   ML  G 
Sbjct: 489 VDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PDVVT+++++ G  + G+ ++  +L   M       N+YT+ I+IN LCK N +++A +
Sbjct: 549 TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFK 608

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               L   DL    F  N +I    K G  ++A  + A +      PD  T+ ++     
Sbjct: 609 MFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLI 668

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +G + E   +F+ M   G AP+   +N+L+  LL  G  N A   + +  E
Sbjct: 669 KEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDE 720



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 197/448 (43%), Gaps = 38/448 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+  + D  + VF +M   G  PN+      +   +  GK      +L + 
Sbjct: 204 TYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEM 263

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    ++Y  LL+ L K     EA  +F    R   +P+   + IL+ G +  G +
Sbjct: 264 STHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSL 323

Query: 278 KKAFEFFYDMGSFGCSPD-----------------------------------IVTYNTL 302
            +   F   M   G SPD                                   IVTY  L
Sbjct: 324 SEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGAL 383

Query: 303 ISGLCRVNEVARGHELLKEVKFKSE-FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           I  LC++  V     +LK  +   E  +PD+  ++S++ G C + K +KA  ++ E+   
Sbjct: 384 IDALCKLGRVDDA--VLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQ 441

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           GI+   V FN L+    + G ++ A+ + + ML  G  PDV+++++L+DG+C  G++++ 
Sbjct: 442 GIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA 501

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            KL D +    L P+  T+  L++  CK  R++DA    +++    L P    YN ++ G
Sbjct: 502 AKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 561

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
             + G   EA  +   M   R + +  T+ I+I G C    + EA  +F+ +       D
Sbjct: 562 LFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLD 621

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRAS 569
             T N +I  LLKGG   +A  +    S
Sbjct: 622 IFTANIMIGALLKGGRKEDAMDLFATIS 649



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 189/391 (48%), Gaps = 11/391 (2%)

Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR------PGEV 222
           +GL+D++++ FD M +     +       +++  RA    A++ ++S F         +V
Sbjct: 30  LGLNDALKL-FDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKV 88

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL-YSQPDTWTFNILIQGLSRIGEVKKAF 281
             S+F Y  L+    +          F    +  +   DT  F+ L++GL     V +A 
Sbjct: 89  APSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEAT 148

Query: 282 EFFYD-MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSV 338
           +     M  FGC+PD+ +Y+ L+ G C         ELL  +    + S  P+VVTYT+V
Sbjct: 149 DILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTV 208

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK   +D+A G++  M   G++P+  T+  LI G+  +G       M + M + G 
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGL 268

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD   ++ L+D  C+NG+  +   + D +  K + PNV  + IL++    E  L++   
Sbjct: 269 QPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHS 328

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           FL  +  N + P   ++N +   + K   +DEA  I  +M ++R  P+ VT+  LI   C
Sbjct: 329 FLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALC 388

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             GR+ +A+  FN+M+  G  PD    +SL+
Sbjct: 389 KLGRVDDAVLKFNQMIDEGMTPDIFVFSSLV 419



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 189/402 (47%), Gaps = 1/402 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y +++  LC+ G     + +FD +   G  PN  +    +      G        L    
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V+    ++N +  A  K+   DEA+++F +  +    P+  T+  LI  L ++G V 
Sbjct: 335 GNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVD 394

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   F  M   G +PDI  +++L+ GLC V++  +  EL  EV        D V + ++
Sbjct: 395 DAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEV-LDQGIRLDTVFFNTL 453

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +   C+ G++ +A  + + M   G++P  +++N L+DG    G +  A  + + ++S G 
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGL 513

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD VT+++L+ GYC+  +++    L  EM  K L+P+V T+  +++ L +  R ++A+ 
Sbjct: 514 KPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 573

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
               +  +      + YN +I+G CK   VDEA  +   +  K  + D  T  I+I    
Sbjct: 574 LYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALL 633

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
             GR  +A+ +F  +   G  PD  T   +   L+K G   E
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 675



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 180/384 (46%), Gaps = 10/384 (2%)

Query: 189 PNSPMIEFFVSSCIRAGKCD---AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           P+S      +    R G+     AA GL+   + G     T +++ LL  L      DEA
Sbjct: 90  PSSFTYTILIGCFCRMGRLKHGFAAFGLI--LKTGWRVNDTVIFSQLLKGLCDAKRVDEA 147

Query: 246 V-YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF---YDMGSFGCSPDIVTYNT 301
              + +        PD ++++IL++G       ++A E      D G    +P++VTY T
Sbjct: 148 TDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
           +I GLC+   V R   + + +  K    P+  TYT +I GY  +GK  +   +  EM++ 
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKG-VRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTH 266

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G++P    + VL+D   K G    A  + + ++  G  P+V  +  L+ GY   G L++ 
Sbjct: 267 GLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEM 326

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
               D M G  +SP+ + F I+  A  K+  +++A     +++   L P    Y  +ID 
Sbjct: 327 HSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDA 386

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            CK G VD+A +   +M ++   PD   F+ L+ G C   +  +A  +F ++L  G   D
Sbjct: 387 LCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLD 446

Query: 542 DITVNSLISCLLKGGMPNEAFRIM 565
            +  N+L+  L + G   EA R++
Sbjct: 447 TVFFNTLMCNLCREGRVMEAQRLI 470



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 191/400 (47%), Gaps = 7/400 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N++  +  +  + D    +FD MR     PN       + +  + G+ D A    +Q  
Sbjct: 345 FNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMI 404

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +T   F+++SL+  L   +  ++A  +F E      + DT  FN L+  L R G V 
Sbjct: 405 DEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVM 464

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +A      M   G  PD+++YNTL+ G C   R++E A+  +++  +  K    PD VTY
Sbjct: 465 EAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLK----PDKVTY 520

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            +++ GYCK  ++D A  ++ EM   G+ P  VT+N ++ G  + G    A+ +   M++
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 580

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
                ++ T++ +I+G C+N  +++  K+   +  K+L  +++T  I+I AL K  R  D
Sbjct: 581 SRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKED 640

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A      +    LVP    Y  + +   K G+++E + + + MEE    P+      L+ 
Sbjct: 641 AMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVR 700

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
               +G +  A +  +K+     + +  T + LIS   +G
Sbjct: 701 WLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRG 740



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 166/357 (46%), Gaps = 1/357 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++ +LC++G  D   + F+ M  +G  P+  +    V       K + A+ L  + 
Sbjct: 379 TYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEV 438

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + + T  +N+L+  L ++    EA  +     R+  +PD  ++N L+ G    G +
Sbjct: 439 LDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRI 498

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +    + S G  PD VTYNTL+ G C+   +   + L +E+  K   +PDVVTY +
Sbjct: 499 DEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKG-LTPDVVTYNT 557

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G  + G+  +A  +Y  M +   + +  T+N++I+G  K   +  A  M   + S  
Sbjct: 558 ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKD 617

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+ T + +I    + G+    + L   +    L P+V T+ ++   L KE  L +  
Sbjct: 618 LQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELD 677

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
                ++ N   P   M N ++      G+++ A   +++++EK    +  T ++LI
Sbjct: 678 ELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 164/369 (44%), Gaps = 47/369 (12%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVK---QNNADEAVYMFKEYFR---LYSQPDTWTFNI 266
           +L+  RP  V      +N LL A+ +    + ++  V +F    R   +   P ++T+ I
Sbjct: 42  MLTHARPASVRA----FNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTI 97

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSP-DIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           LI    R+G +K  F  F  +   G    D V ++ L+ GLC    V    ++L  ++  
Sbjct: 98  LIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL--LRRM 155

Query: 326 SEF--SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            EF  +PDV +Y+ ++ G+C   + ++A  + + M                DG G     
Sbjct: 156 PEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMAD--------------DGDGS---- 197

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                         + P+VVT++++IDG C+   +++   +   M  K + PN +T+T L
Sbjct: 198 --------------HTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCL 243

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+      +  +  + L+++  + L P  ++Y  ++D  CK G   EA  I   +  K  
Sbjct: 244 IHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGI 303

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           KP+   + IL+ G+  +G + E  S  + M+  G +PD    N +     K  M +EA  
Sbjct: 304 KPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMH 363

Query: 564 IMQRASEDQ 572
           I  +  + +
Sbjct: 364 IFDKMRQQR 372



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 1/232 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V++ L     TYN ++   C+    D    +F  M   G  P+       +    + G+ 
Sbjct: 509 VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 568

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             AK L          M+ + YN ++N L K N  DEA  MF        Q D +T NI+
Sbjct: 569 SEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIM 628

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I  L + G  + A + F  + ++G  PD+ TY  +   L +   +    EL   ++ ++ 
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAME-ENG 687

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            +P+     +++      G +++A    ++++       A T ++LI  + +
Sbjct: 688 TAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSR 739



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 36/204 (17%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           K L  S +N     +  TYN+++  LC+    D                     + F S 
Sbjct: 572 KELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEA------------------FKMFHSL 613

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           C +                 ++ +  F  N ++ AL+K    ++A+ +F         PD
Sbjct: 614 CSK-----------------DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPD 656

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+ ++ + L + G +++  E F  M   G +P+    N L+  L    ++ R    L 
Sbjct: 657 VETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLS 716

Query: 321 EVKFKSEFSPDVVTYTSVISGYCK 344
           ++  K+ FS +  T + +IS Y +
Sbjct: 717 KLDEKN-FSLEASTTSMLISIYSR 739


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 187/365 (51%), Gaps = 7/365 (1%)

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           R G+   AK L+++     V  + F YN+LLNA V + + +    +     R        
Sbjct: 194 RRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLV 253

Query: 263 TFNILIQGLS---RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           T+ ILI+  +   RIGE +K +E   +M       D+  Y ++IS  CR   V R   L 
Sbjct: 254 TYTILIEWYASSERIGEAEKVYE---EMCERNVEMDVYVYTSMISWNCRAGNVRRASALF 310

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+  +    P+  T+ ++ISG CK G+M+ A  +  EM   G+  + V FN ++DG+ K
Sbjct: 311 DEMICRG-IVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCK 369

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G M  A  +++ M   G+  DV T++ L  G C+  +  +  ++ + M  K ++PNV T
Sbjct: 370 RGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVT 429

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
               I   C+E  L +  RFL+ ++   +VP    YN +ID + K   V +A+ + AEM 
Sbjct: 430 CATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMV 489

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           EK   PD  T+T LI G C+  ++ EA+ +FN+ML  G   +  T  ++IS L K G  +
Sbjct: 490 EKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRAD 549

Query: 560 EAFRI 564
           EA ++
Sbjct: 550 EALKL 554



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 197/414 (47%), Gaps = 5/414 (1%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           + +E  RV++ +    ++  +V+  LC  G     + + + M + G +P        +++
Sbjct: 171 RMVESGRVDIGV----QSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNA 226

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
           C+     +    +L       V  S   Y  L+          EA  +++E      + D
Sbjct: 227 CVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMD 286

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            + +  +I    R G V++A   F +M   G  P+  T+  LISG+C+  ++     LL+
Sbjct: 287 VYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLE 346

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E++ K     +VV + +++ GYCK G MD+A  + + M   G +    T+N+L  G  K+
Sbjct: 347 EMQCKG-VDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKL 405

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
                A+ +   M+  G  P+VVT ++ I+ YC+ G L +  +    ++ + + PN+ T+
Sbjct: 406 HRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTY 465

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI+A  K  ++  A     ++    L+P  F Y  +I G C    VDEA  +  EM  
Sbjct: 466 NTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLV 525

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           K  + +  T+T +I G   +GR  EA+ ++++M+R+G  PDD    +L+  L K
Sbjct: 526 KGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 8/324 (2%)

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLS----RIGEVKKAFEFFYDMGSFG-CSPDIVTYNTL 302
           MF++  +++         ++++G S    +  +V+    FF  M   G     + +   +
Sbjct: 131 MFRDALKVFDY--VMEKGLVVEGRSCFXKKCNKVELCVRFFRRMVESGRVDIGVQSLTIV 188

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           +  LCR  EV R  EL+ E+  +    P V TY ++++        +    I   M   G
Sbjct: 189 VDVLCRRGEVGRAKELMNEMAARG-VVPTVFTYNTLLNACVVRKDREGVDEILGLMEREG 247

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  S VT+ +LI+ +     +  AE + E M       DV  ++S+I   CR G + +  
Sbjct: 248 VVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRAS 307

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L DEM  + + PN  TF  LI+ +CK  ++  A   L++++   +     ++N ++DG+
Sbjct: 308 ALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGY 367

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G +DEA  +   ME K  + D  T+ IL  G C   R  EA  + N M+  G AP+ 
Sbjct: 368 CKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNV 427

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
           +T  + I    + G   E  R ++
Sbjct: 428 VTCATFIEIYCQEGNLAEPERFLR 451


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 14/413 (3%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +LN    TY +++  LC+        V+FD M   G LPN  +    +S   +A K   A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + L S+ R          YN LLN   K    D+A  + +   +         +  LI G
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L R    ++A  ++  M      PD++ Y  +I GL +   V     LL E+  +    P
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG-LRP 371

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D + Y ++I G+C +G +D+A  +  E++     P+  T+++LI G  K G +  A+++ 
Sbjct: 372 DTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIF 431

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-------------KGKNLSPNV 437
           + M   G LP VVTF+SLI+G C+  +L +   L  +M             +G +   ++
Sbjct: 432 KEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDI 491

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            +  +++  LC+   +  A + L QL  + ++P    YN +I+GFCK GN++ A  +  E
Sbjct: 492 ASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           M+ K   PD VT+  LI G    GR  +A+ IF +M++ GC P+  T  ++++
Sbjct: 552 MQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 189/384 (49%), Gaps = 1/384 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +F +     HL    + +  +   I+    +    +L + +   + +S+  ++ L+ A  
Sbjct: 80  LFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYS 139

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           +    ++AV  F        +PD + FN+++  L R      A   +  M     +PD+V
Sbjct: 140 EAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVV 199

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY  LI GLC+  +      L  E+  +    P+ + Y+ V+SG C+  K+  A  ++++
Sbjct: 200 TYGILIHGLCKTCKTQDALVLFDEMTDRG-ILPNQIIYSIVLSGLCQAKKIFDAQRLFSK 258

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M + G     +T+NVL++GF K G +  A  + + +   G++  V+ +  LI+G  R  +
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
             +      +M  +N+ P+V  +TI+I  L +E R+ +A   L ++    L P    YN 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I GFC  G +DEA  +  E+ +  C P+  T++ILI G C  G + +A  IF +M ++G
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438

Query: 538 CAPDDITVNSLISCLLKGGMPNEA 561
           C P  +T NSLI+ L K     EA
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEA 462



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 180/377 (47%), Gaps = 14/377 (3%)

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           AG  + A    S  R  +     F +N +L+ LV++     A+ ++ +  +    PD  T
Sbjct: 141 AGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVT 200

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           + ILI GL +  + + A   F +M   G  P+ + Y+ ++SGLC+  ++     L  +++
Sbjct: 201 YGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR 260

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S  + D++TY  +++G+CK G +D A  +   +   G     + +  LI+G  +    
Sbjct: 261 -ASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRY 319

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A    ++ML     PDV+ ++ +I G  + G++ + L L  EM  + L P+   +  L
Sbjct: 320 EEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I   C    L++A     ++  +D  P    Y+ +I G CK G +++A  I  EME+  C
Sbjct: 380 IKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGC 439

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKM---------LRIGCAPDDI----TVNSLIS 550
            P  VTF  LI G C   R+ EA  +F +M         LR+    D +    ++  ++ 
Sbjct: 440 LPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMME 499

Query: 551 CLLKGGMPNEAFRIMQR 567
            L + GM  +A++++ +
Sbjct: 500 RLCESGMILKAYKLLMQ 516



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 1/271 (0%)

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + +I  L + N      ++L+E+K  S        ++ +I  Y + G  +KA   ++ M 
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELK-NSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMR 155

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
               KP    FN+++    +    + A  +  +ML     PDVVT+  LI G C+  +  
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             L L DEM  + + PN   ++I+++ LC+  ++ DA+R   +++ +        YN ++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           +GFCK+G +D+A  ++  + +       + +  LI G     R  EA   + KMLR    
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           PD +    +I  L + G   EA  ++   +E
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTE 366



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 88/171 (51%)

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            FS LI+ Y   G   + ++    M+  +  P+++ F ++++ L ++     A     Q+
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
              +L P    Y  +I G CK     +A V+  EM ++   P+++ ++I++ G C   ++
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            +A  +F+KM   GC  D IT N L++   K G  ++AF ++Q  ++D ++
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHI 300



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 37/200 (18%), Positives = 81/200 (40%), Gaps = 4/200 (2%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN+++   C+ G  +    +F  M+  GH+P+S      +    RAG+ + A  +  Q
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                    +  Y +++    ++NN   A+ ++ +Y R +   +     ++ +      E
Sbjct: 587 MVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDN-EE 645

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-FKSEFSPDVVTY 335
           ++ A     +M     + D+  Y   + GL +         +   +K FK   S    + 
Sbjct: 646 LQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISS--ASC 703

Query: 336 TSVISGYCKLGKMDKATGIY 355
             +I   C +  +D A  ++
Sbjct: 704 VMLIGRLCMVENLDMAMDVF 723


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 36/438 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C  G  D+ + V D M+  G  PN      F+    R    + A  L     
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V +     ++L+  L +     EA  +F+E  ++ + P+  T+  LI  L++ G  K
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326

Query: 279 KAFEFFYDMGSFGC-----------------------------------SPDIVTYNTLI 303
           +      +M S G                                    SP+ VTY  LI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             LC+ + V    ++L E++ KS  SP+VVT++SVI+G+ K G +DKAT     M   GI
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKS-ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ VT+  LIDGF K     +A  +   ML  G   +     SL++G  +NG++ + + 
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  +  G  LS +   +T LI+ L K   +  A +F ++L   +++P   +YN  I+  C
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLC 565

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             G   EA   + EM     KPD+ T+  +I+ HC KG   +A+ + ++M      P+ I
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 544 TVNSLISCLLKGGMPNEA 561
           T N+L++ L   G   +A
Sbjct: 626 TYNTLVAGLFGTGAVEKA 643



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 205/455 (45%), Gaps = 39/455 (8%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S++ +  T++ V+    + GL D        M+  G  PN       +    +    DAA
Sbjct: 409 SISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAA 468

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +        V ++ F+ +SL+N L +    +EA+ +FK+        D   +  LI G
Sbjct: 469 LEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDG 528

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G++  AF+F  ++      PD V YN  I+ LC + +       L E++      P
Sbjct: 529 LFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR-NMGLKP 587

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D  TY ++I  +C+ G+  KA  + +EM    IKP+ +T+N L+ G    G +  A+Y+ 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 391 ERMLSFGYLP-----------------------------------DVVTFSSLIDGYCRN 415
             M+S G+ P                                   D+  +++L+   C +
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G   +   + +EM G  ++P+  TF  LI   CK + L++A     Q+   ++ P    +
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N ++ G    G + EA  ++ EME+   +P+ +T+ IL  GH  +   VEA+ ++ +M+ 
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVG 827

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEA---FRIMQR 567
            G  P   T N+LIS   K GM  +A   F+ MQ+
Sbjct: 828 KGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 1/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + ++  LC  G       +F  M   G  PN       + S  +AG+      LL + 
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V M    Y +L++ L KQ   DE     +        P+  T+ +LI  L +   V
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M     SP++VT++++I+G  +   + +  E  + +K +   +P+VVTY +
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG-INPNVVTYGT 454

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ K    D A  +Y++M   G+K +    + L++G  + G +  A  + +     G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D V +++LIDG  + G +    K   E+  +N+ P+   + + IN LC   +  +A+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            FL +++   L P    YN +I   C+ G   +A  ++ EM+    KP+ +T+  L+ G 
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDIT 544
              G + +A  + N+M+  G +P  +T
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 13/430 (3%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  +V  + NH   TY  ++ SL + G    +  +   M S G + +       +   
Sbjct: 297 FREMDKVGAAPNHV--TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + GK D  K  L       ++ +   Y  L++AL K +N DEA  +  E       P+ 
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN----EVARGHE 317
            TF+ +I G  + G + KA E+   M   G +P++VTY TLI G  +       +   H+
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +L E    ++F  D     S+++G  + GK+++A  ++ + +  G+    V +  LIDG 
Sbjct: 475 MLCEGVKVNKFIVD-----SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G+M +A    + ++    LPD V ++  I+  C  G+  +      EM+   L P+ 
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ 589

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  +I + C++     A + L ++K + + P    YN ++ G    G V++A  ++ E
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE 649

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAI-SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           M      P  +T    ++  C + R ++ I  I   M+  G   D    N+L+  L   G
Sbjct: 650 MVSAGFSPSSLTHR-RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHG 708

Query: 557 MPNEAFRIMQ 566
           M  +A  +++
Sbjct: 709 MTRKATVVLE 718



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 165/362 (45%), Gaps = 1/362 (0%)

Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
           G   AA  +  +     + M    YN+L+    +    D A  +          P+  T+
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
              I    R   V++AF+ +  M   G   D+VT + L++GLCR    +  + L +E+  
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD- 301

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K   +P+ VTY ++I    K G+  +   +  EM S G+    VT+  L+D  GK G   
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
             +      LS    P+ VT++ LID  C+   +++  ++  EM+ K++SPNV TF+ +I
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           N   K   L+ A  + + +K   + P    Y  +IDGF K    D A  +  +M  +  K
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +K     L+ G    G++ EA+++F      G + D +   +LI  L K G    AF+ 
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 565 MQ 566
            Q
Sbjct: 542 GQ 543



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 163/378 (43%), Gaps = 1/378 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+ +  LC +G     +     MR+ G  P+       + S  R G+   A  LL + +
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +   YN+L+  L      ++A Y+  E       P + T   ++Q  S+   + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              +    M + G   DI  YNTL+  LC      +   +L+E+   S  +PD +T+ ++
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM-LGSGIAPDTITFNAL 735

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK   +D A   Y +M    I P+  TFN L+ G   VG +  A  +   M   G 
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+ +T+  L  G+ +     + ++L  EM GK   P V T+  LI+   K   +  A+ 
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKE 855

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K ++   + P    Y+ ++ G+ +  N  E    + +M+EK   P K T + +     
Sbjct: 856 LFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFS 915

Query: 519 MKGRMVEAISIFNKMLRI 536
             G   +A  +   + R+
Sbjct: 916 KPGMTWQAQRLLKNLYRV 933



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 190/428 (44%), Gaps = 9/428 (2%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F + S   LSL+H    Y  ++  L + G   +       +     LP++ +   F++  
Sbjct: 507 FKDASGSGLSLDHV--NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              GK   AK  L++ R   +      YN+++ +  ++    +A+ +  E      +P+ 
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHEL 318
            T+N L+ GL   G V+KA     +M S G SP  +T+  ++       R++ +   HE 
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +      +    D+  Y +++   C  G   KAT +  EM   GI P  +TFN LI G  
Sbjct: 685 M----MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K  ++ +A     +ML     P++ TF++L+ G    G++ +   +  EM+   L PN  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ IL     K++   +A R   ++     VPK   YN +I  F KAG + +A  +  +M
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           +++   P   T+ IL+ G        E       M   G +P   T++ +     K GM 
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 559 NEAFRIMQ 566
            +A R+++
Sbjct: 921 WQAQRLLK 928



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 156/366 (42%), Gaps = 71/366 (19%)

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV---- 312
           S+P T  +NIL+  LS   +   A     +M   G   D VT NTL++GLCR  +V    
Sbjct: 99  SRPTTVAYNILLAALS---DHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 313 ---------------ARGHELLKEVKFKSEFSP--------------DVVTYTSVISGYC 343
                          A    LL    F    +               DVV Y ++++G+C
Sbjct: 156 ALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           + G++D A G+ + M   G+ P+  T+   I  + +   +  A  + E M+  G L DVV
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR----------- 452
           T S+L+ G CR+G+ ++   L  EM     +PN  T+  LI++L K  R           
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 453 -----LNDARRFLKQLKW-------------------NDLVPKPFMYNPVIDGFCKAGNV 488
                + D   +   + W                   ++L P    Y  +ID  CKA NV
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           DEA  ++ EMEEK   P+ VTF+ +I G   +G + +A      M   G  P+ +T  +L
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455

Query: 549 ISCLLK 554
           I    K
Sbjct: 456 IDGFFK 461


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 14/413 (3%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           +LN    TY +++  LC+        V+FD M   G LPN  +    +S   +A K   A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
           + L S+ R          YN LLN   K    D+A  + +   +         +  LI G
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L R    ++A  ++  M      PD++ Y  +I GL +   V     LL E+  +    P
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG-LRP 371

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D + Y ++I G+C +G +D+A  +  E++     P+  T+++LI G  K G +  A+++ 
Sbjct: 372 DTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIF 431

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-------------KGKNLSPNV 437
           + M   G LP VVTF+SLI+G C+  +L +   L  +M             +G +   ++
Sbjct: 432 KEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDI 491

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            +  +++  LC+   +  A + L QL  + ++P    YN +I+GFCK GN++ A  +  E
Sbjct: 492 ASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKE 551

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           M+ K   PD VT+  LI G    GR  +A+ IF +M++ GC P+  T  ++++
Sbjct: 552 MQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 189/384 (49%), Gaps = 1/384 (0%)

Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
           +F +     HL    + +  +   I+    +    +L + +   + +S+  ++ L+ A  
Sbjct: 80  LFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYS 139

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           +    ++AV  F        +PD + FN+++  L R      A   +  M     +PD+V
Sbjct: 140 EAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVV 199

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           TY  LI GLC+  +      L  E+  +    P+ + Y+ V+SG C+  K+  A  ++++
Sbjct: 200 TYGILIHGLCKTCKTQDALVLFDEMTDRG-ILPNQIIYSIVLSGLCQAKKIFDAQRLFSK 258

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M + G     +T+NVL++GF K G +  A  + + +   G++  V+ +  LI+G  R  +
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
             +      +M  +N+ P+V  +TI+I  L +E R+ +A   L ++    L P    YN 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I GFC  G +DEA  +  E+ +  C P+  T++ILI G C  G + +A  IF +M ++G
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLG 438

Query: 538 CAPDDITVNSLISCLLKGGMPNEA 561
           C P  +T NSLI+ L K     EA
Sbjct: 439 CLPSVVTFNSLINGLCKANRLEEA 462



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 173/354 (48%), Gaps = 14/354 (3%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F +N +L+ LV++     A+ ++ +  +    PD  T+ ILI GL +  + + A   F +
Sbjct: 164 FAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDE 223

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  P+ + Y+ ++SGLC+  ++     L  +++  S  + D++TY  +++G+CK G
Sbjct: 224 MTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMR-ASGCNRDLITYNVLLNGFCKSG 282

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            +D A  +   +   G     + +  LI+G  +      A    ++ML     PDV+ ++
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            +I G  + G++ + L L  EM  + L P+   +  LI   C    L++A     ++  +
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           D  P    Y+ +I G CK G +++A  I  EME+  C P  VTF  LI G C   R+ EA
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462

Query: 527 ISIFNKM---------LRIGCAPDDI----TVNSLISCLLKGGMPNEAFRIMQR 567
             +F +M         LR+    D +    ++  ++  L + GM  +A++++ +
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 1/271 (0%)

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           + +I  L + N      ++L+E+K  S        ++ +I  Y + G  +KA   +  M 
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELK-NSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMR 155

Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
               KP    FN+++    +    + A  +  +ML     PDVVT+  LI G C+  +  
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
             L L DEM  + + PN   ++I+++ LC+  ++ DA+R   +++ +        YN ++
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           +GFCK+G +D+A  ++  + +       + +  LI G     R  EA   + KMLR    
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           PD +    +I  L + G   EA  ++   +E
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTE 366



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 88/171 (51%)

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            FS LI+ Y   G   + ++    M+  +  P+++ F ++++ L ++     A     Q+
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
              +L P    Y  +I G CK     +A V+  EM ++   P+++ ++I++ G C   ++
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            +A  +F+KM   GC  D IT N L++   K G  ++AF ++Q  ++D ++
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHI 300



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 45/243 (18%), Positives = 95/243 (39%), Gaps = 4/243 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +TYN+++   C+ G  +    +F  M+  GH+P+S      +    RAG+ + A  +  Q
Sbjct: 527 RTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ 586

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                    +  Y +++    ++NN   A+ ++ +Y R +   +     ++ +      E
Sbjct: 587 MVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDN-EE 645

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK-FKSEFSPDVVTY 335
           ++ A     +M     + D+  Y   + GL +         +   +K FK   S    + 
Sbjct: 646 LQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISS--ASC 703

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I   C +  +D A  ++      G +      N L+     +     A ++  RM +
Sbjct: 704 VMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRMEA 763

Query: 396 FGY 398
            GY
Sbjct: 764 SGY 766


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 1/388 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           V+  LC+   + S       M S    P+  ++   V    + GK   A  L  +     
Sbjct: 424 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
              S    N+L++ L       EA  + KE        D  T+N LI G    G+V+  F
Sbjct: 484 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 543

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
               +M   G  PDI TYN L+ GLC V ++    +L  E K  S    ++ TY  ++ G
Sbjct: 544 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK-ASGLISNIHTYGIMMEG 602

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           YCK  +++    ++NE+ S  ++ +++ +N++I    + GN+ +A  + E M S G LP+
Sbjct: 603 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 662

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T+SSLI G C  G +     L DEM+ +   PNV  +T LI   CK  +++ A     
Sbjct: 663 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 722

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           ++   ++ P  F Y  +IDG+CK GN+++AN ++ +M+E    PD VT+ +L  G C   
Sbjct: 723 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 782

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLI 549
            M  A  + ++M   G   D+IT  +L+
Sbjct: 783 DMDNAFKVCDQMATEGLPVDEITYTTLV 810



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 8/344 (2%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           N LL++LVK N  ++      E FR+ S+   PD ++F  +I  L + G+++ A E F  
Sbjct: 213 NFLLSSLVKANEFEKCC----EVFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMK 268

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G SP++VTYN +I+GLC+   +    EL +++  K    P++ TY ++I+G  KL 
Sbjct: 269 MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG-VQPNLKTYGALINGLIKLN 327

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
             DK   + +EM   G  P+ V FN LIDG+ K+GN+  A  +++ M+S    P  VT  
Sbjct: 328 FFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLY 387

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           SL+ G+C++ Q+       +E+    LS +      +++ LCK+ R + A RF K +   
Sbjct: 388 SLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSR 447

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           +  P   +   ++ G CK G   EA  +   + EK     KVT   LI G C  G++ EA
Sbjct: 448 NFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 507

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             I  +ML  G   D IT N+LI      G     FR+ +  ++
Sbjct: 508 SRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 8/363 (2%)

Query: 210 AKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            K +LS+ FRP ++ ++      L+  L K     EA  ++       S     T N LI
Sbjct: 441 TKMMLSRNFRPSDLLLTM-----LVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALI 495

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL   G++ +A     +M   G   D +TYN LI G C   +V  G   L+E   K   
Sbjct: 496 HGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV-EGCFRLREEMTKRGI 554

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD+ TY  ++ G C +GK+D A  +++E  + G+  +  T+ ++++G+ K   +   E 
Sbjct: 555 QPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVEN 614

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   +LS     + + ++ +I  +C+NG +   L+L + MK K + PN  T++ LI+ +C
Sbjct: 615 LFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 674

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
               + DA+  + +++    VP    Y  +I G+CK G +D A     EM      P+K 
Sbjct: 675 NIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKF 734

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM-QR 567
           T+T++I G+C  G M +A ++  KM   G  PD +T N L +   K    + AF++  Q 
Sbjct: 735 TYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQM 794

Query: 568 ASE 570
           A+E
Sbjct: 795 ATE 797



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 184/376 (48%), Gaps = 5/376 (1%)

Query: 145 FSRVNLSLNHSFKTYNLVMR----SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           F    + L+ +F+  +L++      LC+ G H     ++  +   G   +       +  
Sbjct: 438 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHG 497

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
              AGK   A  ++ +     + M    YN+L+     +   +    + +E  +   QPD
Sbjct: 498 LCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPD 557

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            +T+N L++GL  +G++  A + + +  + G   +I TY  ++ G C+ N +     L  
Sbjct: 558 IYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFN 617

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           E+    +   + + Y  +I  +C+ G +  A  +   M S GI P+  T++ LI G   +
Sbjct: 618 EL-LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNI 676

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A+++ + M   G++P+VV +++LI GYC+ GQ++       EM   N+ PN +T+
Sbjct: 677 GLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 736

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           T++I+  CK   +  A   L ++K + +VP    YN + +GFCKA ++D A  +  +M  
Sbjct: 737 TVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMAT 796

Query: 501 KRCKPDKVTFTILIIG 516
           +    D++T+T L+ G
Sbjct: 797 EGLPVDEITYTTLVHG 812



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 202/448 (45%), Gaps = 34/448 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++  V+ +LC+ G  ++   +F  M   G  PN       ++   + G+ D A  L  + 
Sbjct: 245 SFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKM 304

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y +L+N L+K N  D+  ++  E       P+   FN LI G  ++G +
Sbjct: 305 TVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNI 364

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--------------- 322
           + A +    M S   +P  VT  +L+ G C+ +++      L+E+               
Sbjct: 365 EGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSV 424

Query: 323 ------KFKSE-------------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                 KF+               F P  +  T ++ G CK GK  +AT ++  +   G 
Sbjct: 425 VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS 484

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
             S VT N LI G    G +  A  + + ML  G   D +T+++LI G+C  G++    +
Sbjct: 485 PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFR 544

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L +EM  + + P++YT+  L+  LC   +L+DA +   + K + L+     Y  +++G+C
Sbjct: 545 LREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYC 604

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           KA  +++   +  E+  K+ + + + + I+I  HC  G +  A+ +   M   G  P+  
Sbjct: 605 KANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCA 664

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASED 571
           T +SLI  +   G+  +A  ++    ++
Sbjct: 665 TYSSLIHGVCNIGLVEDAKHLIDEMRKE 692



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 164/326 (50%), Gaps = 2/326 (0%)

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           AV +F    R  + P   T N L+  L +  E +K  E F  M    C PD+ ++  +I+
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVIN 251

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
            LC+  ++    EL  +++ K   SP+VVTY  +I+G C+ G++D A  +  +M   G++
Sbjct: 252 ALCKGGKMENAIELFMKME-KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQ 310

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+  T+  LI+G  K+       ++ + M+  G+ P+VV F++LIDGYC+ G +   LK+
Sbjct: 311 PNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKI 370

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            D M  KN++P   T   L+   CK +++  A   L+++  + L   P     V+   CK
Sbjct: 371 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 430

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
                 A      M  +  +P  +  T+L+ G C  G+ +EA  ++ ++L  G     +T
Sbjct: 431 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT 490

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASE 570
            N+LI  L   G   EA RI++   E
Sbjct: 491 SNALIHGLCGAGKLPEASRIVKEMLE 516


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 190/408 (46%), Gaps = 37/408 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F  FS  + SL H F +Y L+   L E  +      +F  +R++G  P+S  +   +   
Sbjct: 469 FSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHL 527

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           ++            QFR   VT++ F     LN L                FR    P  
Sbjct: 528 VKT----------KQFR---VTINVF-----LNILESD-------------FR----PSK 552

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           + +   IQ   ++ +V K  E F  M     SP +  YN LI GLC+V ++    +L  E
Sbjct: 553 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDE 612

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +       P ++TY ++I GYCK G  +K+  +   M +  I+PS +TFN L+ G  K G
Sbjct: 613 M-LARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAG 671

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  AE +   M   G++PD  TFS L DGY  N + +  L + +      L  N YT +
Sbjct: 672 MVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCS 731

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           IL+NALCKE ++  A   L +     LVP   +YN +IDG+ + G++  A + +  ME++
Sbjct: 732 ILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQ 791

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             KPD + +  LI   C  G M  A    NKM   G +P   T N LI
Sbjct: 792 GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILI 839



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 198/403 (49%), Gaps = 1/403 (0%)

Query: 155  SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
            S  TYN ++   C+ G  +    V + M++D   P+       +    +AG  + A+ +L
Sbjct: 621  SLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVL 680

Query: 215  SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            ++ +        F ++ L +     + AD A+ +++       + + +T +IL+  L + 
Sbjct: 681  TEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKE 740

Query: 275  GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            G+++KA E      + G  P+ V YNT+I G  R  ++  G  +  +   K    PD + 
Sbjct: 741  GQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLV-GARMKIDAMEKQGMKPDHLA 799

Query: 335  YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            Y  +I  +C+LG M+ A    N+M   G+ PS  T+N+LI G+G+         + + M 
Sbjct: 800  YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEME 859

Query: 395  SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
              G +P+VV++ +LI+  C+  +L +   +  +M+ + +SPNV  + +LI+  C + ++ 
Sbjct: 860  DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919

Query: 455  DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            DA RF +++    +      YN +IDG    G + EA  ++ E+  K  KPD  T+  LI
Sbjct: 920  DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979

Query: 515  IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
             G+   G +   I+++ +M   G  P   T + LIS   K G+
Sbjct: 980  SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGI 1022



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 181/376 (48%), Gaps = 5/376 (1%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
             YN ++R+ CE+G  ++ +   + M+  G  P+       +    R  + D    LL + 
Sbjct: 799  AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   +   Y +L+N L K +   EA  + ++       P+   +N+LI G    G++
Sbjct: 859  EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI 918

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            + AF F  +M   G   ++VTYNTLI GL    ++A   ++L E+  K    PDV TY S
Sbjct: 919  EDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG-LKPDVFTYNS 977

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +ISGY   G + +   +Y EM + GIKP+  T+++LI    K G  ++ +   E  L   
Sbjct: 978  LISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQ-- 1035

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              PD++ ++ ++  Y  +G +++   L  +M  K++  +  T+  LI    K  +L + R
Sbjct: 1036 --PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVR 1093

Query: 458  RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              + ++K  ++ P+   Y+ ++ G C+  +   A V   EM+EK    D      L+ G 
Sbjct: 1094 SLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGL 1153

Query: 518  CMKGRMVEAISIFNKM 533
              + R  EA ++ ++M
Sbjct: 1154 KEEWRSKEAENVISEM 1169



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 194/451 (43%), Gaps = 32/451 (7%)

Query: 146  SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
            + V+  L  +  T ++++ +LC+ G  +  + +     + G +PN  +    +    R G
Sbjct: 717  TAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKG 776

Query: 206  KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
                A+  +       +      YN L+    +  + + A     +       P   T+N
Sbjct: 777  DLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYN 836

Query: 266  ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            ILI G  R  E  K F+   +M   G  P++V+Y TLI+ LC+ +++     + ++++ +
Sbjct: 837  ILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 896

Query: 326  SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               SP+V  Y  +I G C  GK++ A     EM   GI+ + VT+N LIDG    G +  
Sbjct: 897  G-VSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAE 955

Query: 386  AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
            AE M   +   G  PDV T++SLI GY   G + + + L +EMK   + P + T+ +LI+
Sbjct: 956  AEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS 1015

Query: 446  ALCKEN-------------------------------RLNDARRFLKQLKWNDLVPKPFM 474
               KE                                 ++ A    KQ+    +      
Sbjct: 1016 LCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTT 1075

Query: 475  YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
            YN +I G  K G + E   ++ EM+ +  +P+  T+ I++ GHC     + A   + +M 
Sbjct: 1076 YNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQ 1135

Query: 535  RIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              G   D    + L+S L +     EA  ++
Sbjct: 1136 EKGLLLDVCIGDELVSGLKEEWRSKEAENVI 1166



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 36/291 (12%)

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A + F+ + + G  P   +   L+  L +  +      +   +  +S+F P    Y 
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNI-LESDFRPSKFMYG 556

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
             I    KL  + K   ++N M    I P+   +NVL                       
Sbjct: 557 KAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVL----------------------- 593

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
                       IDG C+  Q+    +L DEM  + L P++ T+  LI+  CK+     +
Sbjct: 594 ------------IDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKS 641

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  +++K +++ P    +N ++ G  KAG V++A  ++ EM+++   PD  TF+IL  G
Sbjct: 642 FKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDG 701

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +    +   A+ ++   +  G   +  T + L++ L K G   +A  I+ R
Sbjct: 702 YSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGR 752



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 129/312 (41%), Gaps = 42/312 (13%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGLLSQ 216
            +Y  ++  LC+       Q+V   M   G  PN  +    +  C   GK  DA +     
Sbjct: 869  SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEM 928

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            F+ G + ++   YN+L++ L       EA  M  E  R   +PD +T+N LI G    G 
Sbjct: 929  FKKG-IELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGN 987

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV--- 333
            V++    + +M + G  P + TY+ LIS LC       G EL K++  +    PD++   
Sbjct: 988  VQRCIALYEEMKTSGIKPTLKTYHLLIS-LC----TKEGIELTKKIFGEMSLQPDLLVYN 1042

Query: 334  --------------------------------TYTSVISGYCKLGKMDKATGIYNEMNSC 361
                                            TY S+I G  K+GK+ +   + +EM + 
Sbjct: 1043 GVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAR 1102

Query: 362  GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
             ++P A T+++++ G  ++ + + A      M   G L DV     L+ G     +  + 
Sbjct: 1103 EMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEA 1162

Query: 422  LKLCDEMKGKNL 433
              +  EM G+ L
Sbjct: 1163 ENVISEMNGRKL 1174


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 36/438 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C  G  D+ + V D M+  G  PN      F+    R    + A  L     
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V +     ++L+  L +     EA  +F+E  ++ + P+  T+  LI  L++ G  K
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326

Query: 279 KAFEFFYDMGSFGC-----------------------------------SPDIVTYNTLI 303
           +      +M S G                                    SP+ VTY  LI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             LC+ + V    ++L E++ KS  SP+VVT++SVI+G+ K G +DKAT     M   GI
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKS-ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ VT+  LIDGF K     +A  +   ML  G   +     SL++G  +NG++ + + 
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  +  G  LS +   +T LI+ L K   +  A +F ++L   +++P   +YN  I+  C
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLC 565

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             G   EA   + EM     KPD+ T+  +I+ HC KG   +A+ + ++M      P+ I
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 544 TVNSLISCLLKGGMPNEA 561
           T N+L++ L   G   +A
Sbjct: 626 TYNTLVAGLFGTGAVEKA 643



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 205/455 (45%), Gaps = 39/455 (8%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S++ +  T++ V+    + GL D        M+  G  PN       +    +    DAA
Sbjct: 409 SISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAA 468

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +        V ++ F+ +SL+N L +    +EA+ +FK+        D   +  LI G
Sbjct: 469 LEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDG 528

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G++  AF+F  ++      PD V YN  I+ LC + +       L E++      P
Sbjct: 529 LFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR-NMGLKP 587

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D  TY ++I  +C+ G+  KA  + +EM    IKP+ +T+N L+ G    G +  A+Y+ 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 391 ERMLSFGYLP-----------------------------------DVVTFSSLIDGYCRN 415
             M+S G+ P                                   D+  +++L+   C +
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G   +   + +EM G  ++P+  TF  LI   CK + L++A     Q+   ++ P    +
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N ++ G    G + EA  ++ EME+   +P+ +T+ IL  GH  +   VEA+ ++ +M+ 
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVG 827

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEA---FRIMQR 567
            G  P   T N+LIS   K GM  +A   F+ MQ+
Sbjct: 828 KGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 1/387 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T + ++  LC  G       +F  M   G  PN       + S  +AG+      LL + 
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V M    Y +L++ L KQ   DE     +        P+  T+ +LI  L +   V
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M     SP++VT++++I+G  +   + +  E  + +K +   +P+VVTY +
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG-INPNVVTYGT 454

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+ K    D A  +Y++M   G+K +    + L++G  + G +  A  + +     G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D V +++LIDG  + G +    K   E+  +N+ P+   + + IN LC   +  +A+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            FL +++   L P    YN +I   C+ G   +A  ++ EM+    KP+ +T+  L+ G 
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDIT 544
              G + +A  + N+M+  G +P  +T
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLT 661



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 171/380 (45%), Gaps = 45/380 (11%)

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  LL   RP     +T  YN LL AL    +A     +  E  +     D  T N L+ 
Sbjct: 92  AIALLRSSRP-----TTVAYNILLAALSDHAHAPA---VLAEMCKRGVPFDGVTVNTLLA 143

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL R G+V  A     D G    + D++ +NTLI+G CRV +      +   +  +    
Sbjct: 144 GLCRNGQVDAAAAL-ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG-LP 201

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            DVV Y ++++G+C+ G++D A G+ + M   G+ P+  T+   I  + +   +  A  +
Sbjct: 202 MDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDL 261

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E M+  G L DVVT S+L+ G CR+G+ ++   L  EM     +PN  T+  LI++L K
Sbjct: 262 YEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAK 321

Query: 450 ENR----------------LNDARRFLKQLKW-------------------NDLVPKPFM 474
             R                + D   +   + W                   ++L P    
Sbjct: 322 AGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVT 381

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y  +ID  CKA NVDEA  ++ EMEEK   P+ VTF+ +I G   +G + +A      M 
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441

Query: 535 RIGCAPDDITVNSLISCLLK 554
             G  P+ +T  +LI    K
Sbjct: 442 ERGINPNVVTYGTLIDGFFK 461



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 183/410 (44%), Gaps = 4/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDG-HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T N ++  LC  G  D+   + D  R  G H  +       ++   R G   AA  +  +
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADR 194

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + M    YN+L+    +    D A  +          P+  T+   I    R   
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V++AF+ +  M   G   D+VT + L++GLCR    +  + L +E+  K   +P+ VTY 
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD-KVGAAPNHVTYC 313

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I    K G+  +   +  EM S G+    VT+  L+D  GK G     +      LS 
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+ VT++ LID  C+   +++  ++  EM+ K++SPNV TF+ +IN   K   L+ A
Sbjct: 374 NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             + + +K   + P    Y  +IDGF K    D A  +  +M  +  K +K     L+ G
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG 493

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               G++ EA+++F      G + D +   +LI  L K G    AF+  Q
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQ 543



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 13/430 (3%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  +V  + NH   TY  ++ SL + G    +  +   M S G + +       +   
Sbjct: 297 FREMDKVGAAPNHV--TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + GK D  K  L       ++ +   Y  L++AL K +N DEA  +  E       P+ 
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN----EVARGHE 317
            TF+ +I G  + G + KA E+   M   G +P++VTY TLI G  +       +   H+
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +L E    ++F  D     S+++G  + GK+++A  ++ + +  G+    V +  LIDG 
Sbjct: 475 MLCEGVKVNKFIVD-----SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G+M +A    + ++    LPD V ++  I+  C  G+  +      EM+   L P+ 
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ 589

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  +I + C++     A + L ++K + + P    YN ++ G    G V++A  ++ E
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE 649

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAI-SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           M      P  +T    ++  C + R ++ I  I   M+  G   D    N+L+  L   G
Sbjct: 650 MVSAGFSPSSLTHR-RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHG 708

Query: 557 MPNEAFRIMQ 566
           M  +A  +++
Sbjct: 709 MTRKATVVLE 718



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 163/378 (43%), Gaps = 1/378 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+ +  LC +G     +     MR+ G  P+       + S  R G+   A  LL + +
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +   YN+L+  L      ++A Y+  E       P + T   ++Q  S+   + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              +    M + G   DI  YNTL+  LC      +   +L+E+   S  +PD +T+ ++
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM-LGSGIAPDTITFNAL 735

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK   +D A   Y +M    I P+  TFN L+ G   VG +  A  +   M   G 
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+ +T+  L  G+ +     + ++L  EM GK   P V T+  LI+   K   +  A+ 
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKE 855

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K ++   + P    Y+ ++ G+ +  N  E    + +M+EK   P K T + +     
Sbjct: 856 LFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFS 915

Query: 519 MKGRMVEAISIFNKMLRI 536
             G   +A  +   + R+
Sbjct: 916 KPGMTWQAQRLLKNLYRV 933



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 190/428 (44%), Gaps = 9/428 (2%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F + S   LSL+H    Y  ++  L + G   +       +     LP++ +   F++  
Sbjct: 507 FKDASGSGLSLDHV--NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              GK   AK  L++ R   +      YN+++ +  ++    +A+ +  E      +P+ 
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHEL 318
            T+N L+ GL   G V+KA     +M S G SP  +T+  ++       R++ +   HE 
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +      +    D+  Y +++   C  G   KAT +  EM   GI P  +TFN LI G  
Sbjct: 685 M----MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K  ++ +A     +ML     P++ TF++L+ G    G++ +   +  EM+   L PN  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ IL     K++   +A R   ++     VPK   YN +I  F KAG + +A  +  +M
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           +++   P   T+ IL+ G        E       M   G +P   T++ +     K GM 
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 559 NEAFRIMQ 566
            +A R+++
Sbjct: 921 WQAQRLLK 928


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 185/384 (48%), Gaps = 7/384 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++ LC          +F  M+  G  PN       +    R G  + A  L  + 
Sbjct: 163 TYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEM 222

Query: 218 RPGEVTMST------FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
             G    +       F YN +++ L K     EA  +F E      +PD  TF+ LI  L
Sbjct: 223 LNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTL 282

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G V +A +F   M   G  PD+ T+ +LI G C V ++    EL   +  K  + PD
Sbjct: 283 CKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKG-YEPD 341

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V++YT +I GYCK   +++A  +YNEM   G  P   TF VL+ G    G +  A+ +  
Sbjct: 342 VISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFG 401

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            +       ++   S  +DG C+NG L + ++L +E+K  N+  ++ +F  LI+ LCK  
Sbjct: 402 VVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKAR 461

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           +L  A    ++L    L P    Y  +I+GFCK G VD AN++   MEE  C P+ +T++
Sbjct: 462 KLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYS 521

Query: 512 ILIIGHCMKGRMVEAISIFNKMLR 535
            L+ G     ++ E + + +KM++
Sbjct: 522 ALLHGFYKNNKLEEVVKLLHKMIQ 545



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 217/434 (50%), Gaps = 10/434 (2%)

Query: 142 FLEFSRVNLS-LNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVS 199
           F  + +++L+ L+ +F T N+++  LC +  + + +  +   MR  G++P+       + 
Sbjct: 111 FSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRR-GYIPDVVTYTSLIK 169

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY------F 253
                 +   A  L  + +      +   Y +L+  L +  N + A+ + +E       +
Sbjct: 170 GLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPY 229

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
            +  +P+ +++NI+I  L +IG+ K+A   F +M   G  PD+VT++ LI  LC+   V 
Sbjct: 230 AINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVI 289

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              + L+ +  +    PD+ T+TS+I G+C +G +D A  ++  M S G +P  +++ VL
Sbjct: 290 EAKKFLETMMLRG-IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVL 348

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I G+ K  N+  A  +   ML  G  PD+ TF  L+ G    G++    KL   +K   +
Sbjct: 349 IYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAV 408

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
             N+Y  ++ ++ LCK   L +A     +LK  ++      +N +IDG CKA  ++ A  
Sbjct: 409 PKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWE 468

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +  ++ ++  +PD VT+ I+I G C  G++  A  +F  M   GC P+ +T ++L+    
Sbjct: 469 LFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFY 528

Query: 554 KGGMPNEAFRIMQR 567
           K     E  +++ +
Sbjct: 529 KNNKLEEVVKLLHK 542



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 205/428 (47%), Gaps = 17/428 (3%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC-----IRAGKCDA 209
           S  ++NL++ +L ++  +  V  ++  M   G  PN   +   ++       +R G    
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +   + P  VT     Y SL+  L  ++   EA  +F    +L   P+  T+  LI+
Sbjct: 150 AGIMRRGYIPDVVT-----YTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIK 204

Query: 270 GLSRIGEVKKAFEFFYDM------GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           GL R G +  A +   +M       +  C P+I +YN +I  LC++ +      L  E+ 
Sbjct: 205 GLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEM- 263

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                 PDVVT++++I   CK G + +A      M   GI P   TF  LI+GF  VG++
Sbjct: 264 VDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDL 323

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            SA+ +   M S GY PDV++++ LI GYC+   + + +KL +EM      P++ TF +L
Sbjct: 324 DSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVL 383

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           +  L    ++ DA++    +K + +    ++ +  +DG CK G + EA  +  E++    
Sbjct: 384 LKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNM 443

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           K D  +F  LI G C   ++  A  +F K+ + G  PD +T   +I+   K G  + A  
Sbjct: 444 KLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANI 503

Query: 564 IMQRASED 571
           + Q   E+
Sbjct: 504 LFQMMEEN 511



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 153/324 (47%), Gaps = 3/324 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++  LC++G     + +F+ M   G  P+       + +  + G    AK  L   
Sbjct: 239 SYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETM 298

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F + SL+       + D A  +F        +PD  ++ +LI G  +   V
Sbjct: 299 MLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNV 358

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + + +M   G  PD+ T+  L+ GL    +V    +L   VK      P  +   S
Sbjct: 359 EEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVK--PHAVPKNLYICS 416

Query: 338 V-ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           V + G CK G + +A  ++NE+ S  +K    +FN LIDG  K   + +A  + E++   
Sbjct: 417 VFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQE 476

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDVVT+  +I+G+C+NGQ++    L   M+    +PN+ T++ L++   K N+L + 
Sbjct: 477 GLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEV 536

Query: 457 RRFLKQLKWNDLVPKPFMYNPVID 480
            + L ++   D+     +Y  V D
Sbjct: 537 VKLLHKMIQKDVSLAASIYTIVED 560



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 149/305 (48%), Gaps = 1/305 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++ +LC+ G+    +   + M   G +P+       +      G  D+AK L    
Sbjct: 274 TFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSM 333

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      Y  L+    K  N +EA+ ++ E  R+   PD  TF +L++GL   G+V
Sbjct: 334 PSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKV 393

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F  +       ++   +  + GLC+   +    EL  E+K       D+ ++  
Sbjct: 394 GDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELK-SYNMKLDIESFNC 452

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK  K++ A  ++ +++  G++P  VT+ ++I+GF K G + +A  + + M   G
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++T+S+L+ G+ +N +L + +KL  +M  K++S     +TI+ + + K+ +  +  
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWL 572

Query: 458 RFLKQ 462
             L++
Sbjct: 573 DILQR 577



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 1/182 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           KT+ ++++ L   G     + +F  ++      N  +   F+    + G    A  L ++
Sbjct: 378 KTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNE 437

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   + +    +N L++ L K    + A  +F++  +   QPD  T+ I+I G  + G+
Sbjct: 438 LKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQ 497

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A   F  M   GC+P+++TY+ L+ G  + N++    +LL ++  + + S     YT
Sbjct: 498 VDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKM-IQKDVSLAASIYT 556

Query: 337 SV 338
            V
Sbjct: 557 IV 558


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 213/476 (44%), Gaps = 5/476 (1%)

Query: 95  FVKVVCTLL-LRSSYLSDTCA--RYLCEKLSPLNSLEVIKRL--DNPKLGLKFLEFSRVN 149
            V+  C LL LR S+     A  R+L   LSP     V++     + +   +F  ++   
Sbjct: 61  LVRDTCRLLELRESWSPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQ 120

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
               H+ + ++ ++  L    LHD  + V   M   G    +      + S  RAGK  +
Sbjct: 121 WRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRS 180

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +L   +         + N  +N LV     D+A+   +   R+  +PD +T+N LI+
Sbjct: 181 AMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIK 240

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL     V  A E    M   GC PD ++Y T++S LC+   V     LL+ ++  +   
Sbjct: 241 GLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLF 300

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD VTY  +I G  K G  D+A     E      +   V ++ ++  F   G M  A+ +
Sbjct: 301 PDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEI 360

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+S G  PDVVT+S+++DG+CR G+L+Q  K+   M   +  PN  T T L+N LCK
Sbjct: 361 VGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCK 420

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             + ++A   L + +     P    Y+ V+ GF + G + E+  +V +M +K   P  V 
Sbjct: 421 VGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVE 480

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +LI   C   +  EA     +    GC  + +   ++I    + G    A  +M
Sbjct: 481 INLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLM 536



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 158/348 (45%), Gaps = 3/348 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++ S C  G     + +   M S G  P+       V    R G+ D A+ ++    
Sbjct: 341 YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMY 400

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +   +T  + +LLN L K     EA  +  +    +  P   T+++++ G  R G++K
Sbjct: 401 KNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLK 460

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           ++ +    M   G  P  V  N LI  LC+  + A   + +++ + K   + +VV +T+V
Sbjct: 461 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKG-CTINVVNFTTV 519

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+ + G ++ A  + ++M      P  VT+ V++D  GK G +  A  + E+ML+ G 
Sbjct: 520 IHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGV 579

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LP  VT+ ++I  YC  G L   L L ++M  +    + Y    ++  LC   +LN+A  
Sbjct: 580 LPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAY--NQVVEKLCAFGKLNEAYS 637

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            L ++     V      + +++ F   G   +A  +   M  +   PD
Sbjct: 638 LLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPD 685



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 13/272 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TY+ V+   C +G  D  + +  +M  +   PN+      ++   + GK   A  LL++ 
Sbjct: 375 TYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKS 434

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               + P ++T S  M+       +K++  D  V M ++ F     P T   N+LI  L 
Sbjct: 435 EEEWWTPSDITYSVVMHGFRREGKLKES-CDVVVQMLQKGF----FPTTVEINLLIHALC 489

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +  +  +A +F     S GC+ ++V + T+I G  R  ++     L+ ++ + S   PDV
Sbjct: 490 KDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM-YLSNRHPDV 548

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTYT V+    K G++ +ATG+  +M + G+ P+ VT+  +I  + + GN+     + E+
Sbjct: 549 VTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEK 608

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           ML+   +     ++ +++  C  G+LN+   L
Sbjct: 609 MLARQEMKS--AYNQVVEKLCAFGKLNEAYSL 638



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%)

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F  L+ +  +  +L  A R L  ++ +   P   + N  ++    AG VD+A      M 
Sbjct: 165 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 224

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
               +PD  T+  LI G C   R+V+A+ +   ML+ GC PD I+  +++S L K     
Sbjct: 225 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVE 284

Query: 560 EAFRIMQRASEDQNL 574
           E   ++QR   D  L
Sbjct: 285 EVRGLLQRMRNDAGL 299



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 7/247 (2%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY++VM      G L +S  VV   M   G  P +  I   + +  +  K   AK  + Q
Sbjct: 445 TYSVVMHGFRREGKLKESCDVVVQ-MLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQ 503

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +    T++   + ++++   +Q + + A+ +  + +     PD  T+ +++  L + G 
Sbjct: 504 CQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGR 563

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K+A      M + G  P  VTY T+I   C    +     LL+++  + E       Y 
Sbjct: 564 LKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS---AYN 620

Query: 337 SVISGYCKLGKMDKATG-IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            V+   C  GK+++A   +Y  + +  ++  A T ++L++ F   G  + A  +  RM  
Sbjct: 621 QVVEKLCAFGKLNEAYSLLYKILRTASVR-DAQTCHILMESFLNRGLGLQAYNVACRMFR 679

Query: 396 FGYLPDV 402
              +PDV
Sbjct: 680 RNLIPDV 686



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPK----PFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + A+ +     D RR  +  +W D   +    P +++ ++         D A  +V  M 
Sbjct: 95  VRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMI 154

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            +  +     F  L++ +   G++  A+ + + M + GCAPD    N  ++ L+  G  +
Sbjct: 155 RRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVD 214

Query: 560 EAFRIMQR 567
           +A    +R
Sbjct: 215 KALEFAER 222


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 157/287 (54%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAM 199

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 200 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 259

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + +RMLS   LPD++T+++LI G C+ G L Q   L DEM  K L P+  T+T L
Sbjct: 260 DLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTL 319

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 320 IDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 379

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KP+  T+T++I   C KG + +   +  +M R G  P  +T N L++
Sbjct: 380 KPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 426



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 160/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 137 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 196

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK
Sbjct: 197 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LVPNGVTFTTLIDGHCK 255

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY  M S  + P  +T+N LI G  K G++  A ++ + M   G  PD +T
Sbjct: 256 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 315

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 316 YTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREML 375

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 376 SVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 180/352 (51%), Gaps = 9/352 (2%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW----TFNILIQGLSRIGEVKKAFE 282
           F+++ L+ A ++     +A+    E +RL  +   W    T   +++ L ++   K  + 
Sbjct: 69  FVFSGLITAYLESEFLRDAI----ECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 124

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           F+  +   G    +  +N L+   C+  ++     +   +  K    P VV+Y ++++GY
Sbjct: 125 FYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGY 183

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            +LG +D+   + + M + G++P   T++VLI+G  K   M  A  + + ML  G +P+ 
Sbjct: 184 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 243

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VTF++LIDG+C+NG+++  +++   M  ++L P++ T+  LI  LCK+  L  A   + +
Sbjct: 244 VTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDE 303

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    L P    Y  +IDG CK G++D A      M ++    D V +T LI G C +GR
Sbjct: 304 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGR 363

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            V+A  +  +ML +G  P+  T   +I+   K G   +  ++++    D ++
Sbjct: 364 SVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 415



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 137 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 196

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  + 
Sbjct: 197 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 256

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S    PD++TYNTLI GLC+  ++ + H L+ E+  K    PD +T
Sbjct: 257 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKG-LKPDKIT 315

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A      M    I    V +  LI G  + G  V AE M   ML
Sbjct: 316 YTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREML 375

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           S G  P+  T++ +I+ +C+ G + +G KL  EM+     P+V T+ +L+N 
Sbjct: 376 SVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 178/342 (52%), Gaps = 9/342 (2%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR-IGEVKKAFEFFYDM 287
           Y S+   LV++N    A+  +K    +  +    + N+LI+ L +  G +  AFE F +M
Sbjct: 123 YISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREM 182

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              GC PD  TY TLI+GLC++ +     EL KE+  K   SP VVTY+ ++ G C+ G 
Sbjct: 183 PKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKG-CSPSVVTYSCLMHGLCQAGN 241

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           +D+A G++++M    I+P+  T++ L+DG  K G  + A  + E M+   + P++VT+S+
Sbjct: 242 VDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYST 301

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+G C+ G+L + ++  D MK + L P+   +  +IN  C   +  +A  +L ++    
Sbjct: 302 LINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQ 361

Query: 468 LVPKPFMY-------NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           + P    +       N V+ G C  GN++ +  +   M  +    D  TF  L+   C K
Sbjct: 362 ISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKK 421

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           G + +A  IF++M+  GC PD    ++++          EAF
Sbjct: 422 GDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAF 463



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 200/400 (50%), Gaps = 12/400 (3%)

Query: 176 QVVFDYMR---SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           +++FD      S+G   +       +S  + A +   A+ +L++ +  +  ++  ++ S+
Sbjct: 32  KIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSI 91

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
                + +   +A+ +F +      +P   ++  +   L    ++K A  F+  M   G 
Sbjct: 92  CRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGV 151

Query: 293 SPDIVTYNTLISGLCR-VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
              +V+ N LI  LC+    +    E+ +E+  K    PD  TY ++I+G CKLGK  +A
Sbjct: 152 RQSVVSLNVLIKALCKNSGTIDAAFEIFREMP-KRGCDPDSYTYGTLINGLCKLGKTFEA 210

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++ EM++ G  PS VT++ L+ G  + GN+  A  + ++M      P+V T+SSL+DG
Sbjct: 211 KELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDG 270

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+NG   + ++L + M  K   PN+ T++ LIN LCKE +L +A   L ++K   L P 
Sbjct: 271 LCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPD 330

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI-------LIIGHCMKGRMV 524
             +Y  +I+GFC      EA   + EM   +  P++VT+++       ++ G C  G + 
Sbjct: 331 AGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLN 390

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +  ++  M   G + D  T +SL+ C  K G  ++A RI
Sbjct: 391 RSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARI 430



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 164/354 (46%), Gaps = 11/354 (3%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGKCDAAKGLLS 215
           K+Y  V   L E          + YMR  G   +   +   + + C  +G  DAA  +  
Sbjct: 121 KSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFR 180

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +         ++ Y +L+N L K     EA  +FKE       P   T++ L+ GL + G
Sbjct: 181 EMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAG 240

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V +A   F  M      P++ TY++L+ GLC+        ELL E+  +    P++VTY
Sbjct: 241 NVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELL-EMMVRKRHKPNMVTY 299

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +++I+G CK GK+ +A    + M   G+KP A  +  +I+GF  +     A    + M+ 
Sbjct: 300 STLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVL 359

Query: 396 FGYLPDVVTFS-------SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
               P+ VT+S        ++ G C NG LN+  +L   M+ + +S +  TF  L+   C
Sbjct: 360 GQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFC 419

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA--NVIVAEMEE 500
           K+  L+ A R   ++  +  VP   +++ V+ GF     V EA  +++V  M E
Sbjct: 420 KKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMNE 473



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 142/285 (49%), Gaps = 12/285 (4%)

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF-KSEFSPDVVTYTSVISGYCKLGK 347
           S G   D  T+  +IS L   NE     E+L  +K  K   + ++  + S+  GY ++  
Sbjct: 43  SNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEI--FLSICRGYGRVHM 100

Query: 348 MDKATGIYNEMNSCGIKPSAVT----FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
              A  ++++MN  G KP+  +    F +L++       M   +YMRE     G    VV
Sbjct: 101 PLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMRE----MGVRQSVV 156

Query: 404 TFSSLIDGYCRN-GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           + + LI   C+N G ++   ++  EM  +   P+ YT+  LIN LCK  +  +A+   K+
Sbjct: 157 SLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKE 216

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +      P    Y+ ++ G C+AGNVDEA  +  +M++K  +P+  T++ L+ G C  G 
Sbjct: 217 MDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGG 276

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +EA+ +   M+R    P+ +T ++LI+ L K G   EA   + R
Sbjct: 277 SLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDR 321


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 184/371 (49%), Gaps = 5/371 (1%)

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL--VKQNNADEAVYMFKEYFRLYSQPDTWT 263
           K   A GL+ + +          YN++L+ L   +    D+++    E       P   T
Sbjct: 207 KLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQIT 266

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N +I G  R G+V+KAF+F   M      PD+ T N L+ GLC    +    +L     
Sbjct: 267 YNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI 326

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV-GN 382
            K + + D VTY ++ISG CK G+ ++A  +  EM    + P   T+N ++       G 
Sbjct: 327 SKGK-AIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQ 385

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A   R +M+   + PD+ T + L+ G C  G L+  LKL +    K  + +  T+  
Sbjct: 386 VEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNT 445

Query: 443 LINALCKENRLNDARRFLKQLKW-NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           +I+ LCKE R  +A   L +++  N LVP    YN +I G+C+ G V++A     +M EK
Sbjct: 446 IISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEK 505

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             KPD  T  IL+ G C +G +V+A+ +FN  +  G A D +T N++IS L K G   EA
Sbjct: 506 SFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEA 565

Query: 562 FRIMQRASEDQ 572
           F ++    E +
Sbjct: 566 FDLLAEMKEKK 576



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 166/324 (51%), Gaps = 6/324 (1%)

Query: 145 FSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           F   N  +  SFK    T N+++R LC  G+ D+   +F+   S G   ++      +S 
Sbjct: 284 FQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISG 343

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QP 259
             + G+ + A  LL++    ++    + YN++L AL       E  + F+      S +P
Sbjct: 344 LCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKP 403

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D +T NIL++GL   G +  A + F    S G + D VTYNT+ISGLC+        +LL
Sbjct: 404 DLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLL 463

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E++ K+   PD  TY ++I GYC+ G+++KA    N+M     KP   T N+L+ G  +
Sbjct: 464 AEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCR 523

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +V A  +    +S G   D VT++++I G C+ G+  +   L  EMK K L P+ YT
Sbjct: 524 EGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYT 583

Query: 440 FTILINALCKENRLNDARRFLKQL 463
           +  ++ AL    R+ +A  F+ ++
Sbjct: 584 YNAILCALADAGRM-EAEEFMSKI 606



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 171/374 (45%), Gaps = 13/374 (3%)

Query: 158 TYNLVMRSL--CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN ++  L  C  G  D      + +   G +P+       +    R G+ + A     
Sbjct: 229 SYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKA----F 284

Query: 216 QFRPGEVTMS----TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           QFR   V  S     F  N LL  L  +   D A+ +F  +       D  T+N +I GL
Sbjct: 285 QFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGL 344

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN-EVARGHELLKEVKFKSEFSP 330
            + G  ++AF+   +M      PD  TYN ++  L     +V +  +   ++  KS F P
Sbjct: 345 CKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKS-FKP 403

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYM 389
           D+ T   ++ G C  G +D A  ++N   S G    AVT+N +I G  K G    A + +
Sbjct: 404 DLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLL 463

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E     G +PD  T++++I GYCR GQ+ +  +  ++M  K+  P+++T  IL+  LC+
Sbjct: 464 AEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCR 523

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E  L  A +                YN +I G CK G  +EA  ++AEM+EK+  PD  T
Sbjct: 524 EGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYT 583

Query: 510 FTILIIGHCMKGRM 523
           +  ++      GRM
Sbjct: 584 YNAILCALADAGRM 597



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 194/435 (44%), Gaps = 34/435 (7%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMR-SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           NL++  L    L +    +  + + S  HL  + +    + S +   K   AK LL+ F 
Sbjct: 52  NLLISVLSSNTLSNKSNTLLSFFKWSQTHLSVTSLSHLPLISLLSHQKLSDAKSLLTAFI 111

Query: 219 PGEVTMST----------------FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
             + T                    + ++ + A V  N    A  +F    RL+ +P+  
Sbjct: 112 SADRTHLLHHHLLHSPFKKVQSLRVILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLL 171

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T N LI  L R           Y      C    +  N +  G+   N+++    L+ ++
Sbjct: 172 TRNTLINALVR-----------YPSKPSVCLSKAIFTNVIKFGV--KNKLSEAIGLIGKM 218

Query: 323 KFKSEFSPDVVTYTSVIS--GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           K  S F PD  +Y +++     C+ GK D++    NE+   G+ P  +T+N +I G+ + 
Sbjct: 219 KDFSCF-PDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCRE 277

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A   R +M+   + PD+ T + L+ G C  G L+  LKL +    K  + +  T+
Sbjct: 278 GQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTY 337

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA-GNVDEANVIVAEME 499
             +I+ LCKE R  +A   L +++   L P  + YN ++     A G V++A     +M 
Sbjct: 338 NTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMV 397

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           EK  KPD  T  IL+ G C +G +  A+ +FN  +  G A D +T N++IS L K G   
Sbjct: 398 EKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFE 457

Query: 560 EAFRIMQRASEDQNL 574
           EAF ++    E   L
Sbjct: 458 EAFDLLAEMEEKNGL 472



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 155/334 (46%), Gaps = 3/334 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G  +      + M      P+       +      G  D A  L + +
Sbjct: 266 TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTW 325

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI-GE 276
                 +    YN++++ L K+   +EA  +  E       PD +T+N ++  L+   G+
Sbjct: 326 ISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQ 385

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V+KAF+F   M      PD+ T N L+ GLC    +    +L      K + + D VTY 
Sbjct: 386 VEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGK-AIDAVTYN 444

Query: 337 SVISGYCKLGKMDKATGIYNEMNS-CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           ++ISG CK G+ ++A  +  EM    G+ P   T+N +I G+ + G +  A   R +M+ 
Sbjct: 445 TIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVE 504

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
             + PD+ T + L+ G CR G L + LKL +    K  + +  T+  +I+ LCKE R  +
Sbjct: 505 KSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEE 564

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
           A   L ++K   L P  + YN ++     AG ++
Sbjct: 565 AFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 201/393 (51%), Gaps = 7/393 (1%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNS 191
           +LG   L FS  +  L   ++    T   +++ LC  G +H ++    D + + G   N 
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHF-HDKVLALGFQLNQ 174

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
                 ++   + G+  AA  +L +     V +   MYN++++ + K    ++A   + E
Sbjct: 175 VSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSE 234

Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
                  P   T+N LI GL  +G++K A    + M     +P + T++ L+   C+  +
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294

Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
           V     +   V  K +  P++VTY S+++GYC + +++KA  I+N M   G+ P   +++
Sbjct: 295 VKEAKNVF-VVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYS 353

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           ++I GF K+  +  A  + E M      PDVVT++SLIDG C++G+++  LKL  EM  +
Sbjct: 354 IMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDR 413

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
              PN+ T+  L++ALCK + ++ A   L +LK +++ P    YN +I+G CK+G + +A
Sbjct: 414 GQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDA 473

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
             +  ++       D  T+  +I G C KG ++
Sbjct: 474 QKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVI 506



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 192/392 (48%), Gaps = 5/392 (1%)

Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
           P   +I+F   + S ++A        L  Q     +  +    + L+N   +  +   + 
Sbjct: 65  PTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSF 124

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F    +   +PD  T   LI+GL   G++ KA  F   + + G   + V+Y TLI+GL
Sbjct: 125 SVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGL 184

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+V +     E+L+ +  K     DVV Y ++I G CK   ++ A   Y+EM +  I P+
Sbjct: 185 CKVGQTKAALEMLRRIDGKL-VRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPT 243

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT+N LI G   +G +  A  +  +M+     P V TFS L+D +C+ G++ +   +  
Sbjct: 244 VVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFV 303

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            M  K++ PN+ T+  L+N  C  N +N A      +    + P    Y+ +I GFCK  
Sbjct: 304 VMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIK 363

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            VDEA  +  EM  K+  PD VT+  LI G C  GR+  A+ +  +M   G  P+ IT N
Sbjct: 364 MVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYN 423

Query: 547 SLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
           SL+  L K    ++A  ++ +  +D N+Q PS
Sbjct: 424 SLLDALCKNHHVDKAIELLTKL-KDHNIQ-PS 453



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 204/400 (51%), Gaps = 3/400 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQV-VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T ++++    ++G H+S+   VF  +   G+ P++  +   +      G    A     +
Sbjct: 106 TLSILINCFSQLG-HNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDK 164

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                  ++   Y +L+N L K      A+ M +       + D   +N +I G+ +   
Sbjct: 165 VLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKL 224

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  AF+F+ +M +    P +VTYNTLI GLC + ++     LL ++  ++  +P V T++
Sbjct: 225 VNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN-INPTVYTFS 283

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++  +CK GK+ +A  ++  M    +KP+ VT+N L++G+  V  +  AE +   M   
Sbjct: 284 ILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQI 343

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV ++S +I G+C+   +++ +KL +EM  K + P+V T+  LI+ LCK  R++ A
Sbjct: 344 GVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYA 403

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + + ++      P    YN ++D  CK  +VD+A  ++ ++++   +P   T+ ILI G
Sbjct: 404 LKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILING 463

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            C  GR+ +A  +F  +L  G   D  T N++I    K G
Sbjct: 464 LCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 184/355 (51%), Gaps = 10/355 (2%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           + P  +T++T     L+  L  + +  +A++   +   L  Q +  ++  LI GL ++G+
Sbjct: 135 YEPDAITLTT-----LIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQ 189

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            K A E    +       D+V YNT+I G+C+   V    +   E+  K    P VVTY 
Sbjct: 190 TKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK-RICPTVVTYN 248

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I G C +G++  A G+ ++M    I P+  TF++L+D F K G +  A+ +   M+  
Sbjct: 249 TLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKK 308

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P++VT++SL++GYC   ++N+   + + M    ++P+V++++I+I+  CK   +++A
Sbjct: 309 DVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEA 368

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  +++    + P    YN +IDG CK+G +  A  ++ EM ++   P+ +T+  L+  
Sbjct: 369 MKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDA 428

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            C    + +AI +  K+      P   T N LI+ L K G   +A    Q+  ED
Sbjct: 429 LCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDA----QKVFED 479



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 52/124 (41%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC+ G       +   M   G  PN       + +  +    D A  LL++ 
Sbjct: 386 TYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKL 445

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  S   YN L+N L K     +A  +F++        D +T+N +I+G  + G V
Sbjct: 446 KDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505

Query: 278 KKAF 281
              F
Sbjct: 506 IPQF 509


>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
 gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
 gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
          Length = 661

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++P+    +S+  RA   DAA  LL+  +   +T  +    +L+++L       EA  +
Sbjct: 219 PDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEAL 278

Query: 249 FKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           F E+F     +P T  +N L++G  +IG +K A +   +M   G +PD  TY+ L+    
Sbjct: 279 FLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 338

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           R         LLKE++      P    ++ +++G+   G+  KA  +  EM++ G++P  
Sbjct: 339 RAGRWESARILLKEMEADG-VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDR 397

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             +NV+ID FGK   +  A    +RM   G  PDVVT+++LID +C+ G+ ++ ++L DE
Sbjct: 398 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 457

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+  N      T+ I+IN L +E R       L ++K   LVP    Y  ++D + ++G 
Sbjct: 458 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGR 517

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             EA   +  M+    KP    +  L+  +  +G    A+++   M   G     + +NS
Sbjct: 518 FKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 577

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           LI+   +     EAF ++Q
Sbjct: 578 LINAFGEDRRIAEAFSVLQ 596



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 185/412 (44%), Gaps = 39/412 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FLEF      +    + YN +++   ++G   + + V D M   G  P+       V + 
Sbjct: 279 FLEFFLAG-EIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 337

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            RAG+ ++A+ LL                       K+  AD              +P +
Sbjct: 338 TRAGRWESARILL-----------------------KEMEADGV------------KPSS 362

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           + F+ ++ G    GE +KAF    +M + G  PD   YN +I    + N +  GH +   
Sbjct: 363 YVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL--GHAMDAF 420

Query: 322 VKFKSE-FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            + + E   PDVVT+ ++I  +CK G+ D+A  +++EM          T+N++I+  G+ 
Sbjct: 421 DRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEE 480

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
                 E M   M   G +P+++T+++L+D Y R+G+  + +   + MK   L P+   +
Sbjct: 481 QRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMY 540

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             L+NA  +    + A   +K ++ + L     + N +I+ F +   + EA  ++  M+E
Sbjct: 541 HALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 600

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              +PD +T+T L+       +  +   I+ +M+  GCAPD      L S L
Sbjct: 601 NGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSAL 652



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 4/316 (1%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PD   F+ LI   +R      A E      + G +P       LIS L     VA    
Sbjct: 218 EPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEA 277

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E     E  P    Y +++ GY K+G +  A  + +EM+ CG+ P   T+++L+D +
Sbjct: 278 LFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 337

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G   SA  + + M + G  P    FS ++ G+   G+  +   +  EM    + P+ 
Sbjct: 338 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDR 397

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           + + ++I+   K N L  A     +++   + P    +N +ID  CK G  D A  +  E
Sbjct: 398 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 457

Query: 498 MEEKRCKPDKVTFTILI--IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           M E  C     T+ I+I  +G   +   VEA  +  +M   G  P+ IT  +L+    + 
Sbjct: 458 MRESNCPLGTTTYNIMINLLGEEQRWEGVEA--MLAEMKEQGLVPNIITYTTLVDVYGRS 515

Query: 556 GMPNEAFRIMQRASED 571
           G   EA   ++    D
Sbjct: 516 GRFKEAVDCIEAMKAD 531


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 191/392 (48%), Gaps = 1/392 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN +M    +        ++++ M+S    P+       V+   R G+ +    LL    
Sbjct: 257 YNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLS 316

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                  + +YN  ++ L      DEA+   ++       P    FN +I   SR G  +
Sbjct: 317 QSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEE 376

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KA++ +  M  FG  P  +T ++LI GL ++  +    +LL E+  +     +   +T +
Sbjct: 377 KAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEG-LPINKAAFTLL 435

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GY ++G +  A  ++NEM   GI P AV F+  I+G   VG +  A  +  +M   G+
Sbjct: 436 LDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGF 495

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +P+   ++SLI G+C +G+L + L L  EM  K L P+++T  I+IN LCKE R+  A  
Sbjct: 496 MPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASD 555

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + +    L+P    YN +IDG+CKA +    + +V +M      PD  T+ I + G C
Sbjct: 556 VFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLC 615

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              +M  A+ +  +++  G  PD +T N++++
Sbjct: 616 TGRKMSRAVMMLEELISAGVVPDTVTYNTVMN 647



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 186/412 (45%), Gaps = 1/412 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T+  V+ + C  G     + +FD M+  GH+PN       ++  ++A     A  L 
Sbjct: 218 SLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLY 277

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +   V      +N L+    +    ++   + ++  +  S   +  +NI + GL   
Sbjct: 278 EEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWA 337

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G + +A +F  DM   G +P +V +N++I+   R     + ++  + +  K    P  +T
Sbjct: 338 GWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYR-MMVKFGLFPSSLT 396

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
            +S+I G  KL ++ +A  +  EM   G+  +   F +L+DG+ ++G++  A  +   M 
Sbjct: 397 CSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEME 456

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PD V FS+ I+G    G +++   +  +M  K   PN + +  LI   C   RL 
Sbjct: 457 GRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQ 516

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           +A    +++    L+P  F  N +I+G CK G +  A+ +   M      PD VT+  LI
Sbjct: 517 EALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLI 576

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            G+C     V    + NKM   G  PD  T N  +  L  G   + A  +++
Sbjct: 577 DGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLE 628



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 185/470 (39%), Gaps = 71/470 (15%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           + L  S     ++ + L  +G H SV  +   M   G  P +      +    R G    
Sbjct: 108 VGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKV 167

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            + LL   +  +     + YN L+NA   +    +A+   +        P   TF  +I 
Sbjct: 168 GESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVIN 227

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
                G + +A   F  M   G  P++V YNTL++G  +  ++ + + L +E+K K+  +
Sbjct: 228 AFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKA-VA 286

Query: 330 PDVVT-----------------------------------YTSVISGYCKLGKMDKATGI 354
           PD  T                                   Y   +SG C  G +D+A   
Sbjct: 287 PDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKF 346

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI----- 409
             +M   GI P+ V FN +I  + + G    A      M+ FG  P  +T SSLI     
Sbjct: 347 LEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSK 406

Query: 410 ------------------------------DGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
                                         DGY R G +     L +EM+G+ + P+   
Sbjct: 407 LWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVA 466

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F+  IN L     +++A     Q+     +P  F+YN +I GFC +G + EA ++  EM 
Sbjct: 467 FSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMA 526

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            K   PD  T  I+I G C +GRM  A  +F  M   G  PD +T N+LI
Sbjct: 527 RKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLI 576



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 181/387 (46%), Gaps = 2/387 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+ +  LC  G  D      + M   G  P        +++  RAG  + A        
Sbjct: 327 YNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMV 386

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  S+   +SL+  L K     EA  +  E        +   F +L+ G  R+G+V 
Sbjct: 387 KFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVA 446

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A+  + +M   G  PD V ++  I+GL  V  V   +++  ++  K  F P+   Y S+
Sbjct: 447 GAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMS-KKGFMPNNFVYNSL 505

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+C  G++ +A  +  EM   G+ P   T N++I+G  K G M SA  +   M   G 
Sbjct: 506 IRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGL 565

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           +PD+VT+++LIDGYC+        ++ ++M      P++ T+ I ++ LC   +++ A  
Sbjct: 566 IPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVM 625

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L++L    +VP    YN V++G C    ++ A ++ A++ +    P+ VT  +L+   C
Sbjct: 626 MLEELISAGVVPDTVTYNTVMNGVC-TDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFC 684

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITV 545
            +G   + I    K+  I    D+I++
Sbjct: 685 KQGMPEKTIMWGQKLNEISFGFDEISI 711



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 171/367 (46%), Gaps = 5/367 (1%)

Query: 198 VSSCIRAGKCDAAKGLLSQF--RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
           VS  IR    D ++ ++     R  E      + ++L+   +K     EA+ +      +
Sbjct: 49  VSWVIRRVGVDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREV 108

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +P +    IL + L RIG+    ++    M   G  P    +N +I G CR   V  G
Sbjct: 109 GLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVG 168

Query: 316 HELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             LL  + KFK +  PDV  Y  +I+ YC  G+   A G    M   G  PS VTF  +I
Sbjct: 169 ESLLCVMQKFKCQ--PDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVI 226

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
           + F   GNM+ A  + + M   G++P+VV +++L++GY +   + Q   L +EMK K ++
Sbjct: 227 NAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVA 286

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           P+  TF IL+    +  R  D  R L+ L  +  +    +YN  + G C AG +DEA   
Sbjct: 287 PDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKF 346

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           + +M EK   P  V F  +I  +   G   +A   +  M++ G  P  +T +SLI  L K
Sbjct: 347 LEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSK 406

Query: 555 GGMPNEA 561
                EA
Sbjct: 407 LWRLQEA 413



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 181/444 (40%), Gaps = 36/444 (8%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F   + +MR   ++ +      +   MR  G  P+S  I       +R G   +   LL 
Sbjct: 79  FSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLR 138

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                        +N+++    ++ +      +     +   QPD + +NILI      G
Sbjct: 139 GMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRG 198

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +   A  +   M   GC+P +VT+ T+I+  C    +     L   +K ++   P+VV Y
Sbjct: 199 QTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMK-EAGHIPNVVCY 257

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG---FGK------------- 379
            ++++GY K   + +A  +Y EM S  + P   TFN+L+ G   +G+             
Sbjct: 258 NTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQ 317

Query: 380 -------------------VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
                               G +  A    E ML  G  P VV F+S+I  Y R G   +
Sbjct: 318 SGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEK 377

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             K    M    L P+  T + LI  L K  RL +AR  L ++    L      +  ++D
Sbjct: 378 AYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLD 437

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+ + G+V  A  +  EME +   PD V F+  I G  + G + EA  +F +M + G  P
Sbjct: 438 GYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMP 497

Query: 541 DDITVNSLISCLLKGGMPNEAFRI 564
           ++   NSLI      G   EA  +
Sbjct: 498 NNFVYNSLIRGFCNSGRLQEALML 521



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 125/304 (41%), Gaps = 36/304 (11%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D    +TL+ G  +V       E++  ++ +    P     T +     ++G       +
Sbjct: 78  DFSVLDTLMRGFLKVEMGCEALEIVGRMR-EVGLRPSSSAITILFKLLLRIGDHGSVWKL 136

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
              M   G +P    FN +I GF + G++   E +   M  F   PDV  ++ LI+ YC 
Sbjct: 137 LRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCT 196

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            GQ    L     M     +P++ TF  +INA C +  + +AR     +K    +P    
Sbjct: 197 RGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVC 256

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH----------------- 517
           YN +++G+ KA ++ +AN++  EM+ K   PD  TF IL+ GH                 
Sbjct: 257 YNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLS 316

Query: 518 ------------------CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
                             C  G + EA+     ML  G  P  +  NS+I+   + G+  
Sbjct: 317 QSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEE 376

Query: 560 EAFR 563
           +A++
Sbjct: 377 KAYK 380


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 196/414 (47%), Gaps = 4/414 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  +MR+LC          +   M+  G  P+       +     A   D A  LL++ 
Sbjct: 96  SYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +  +Y+ LL+   K    +    +F+E      +PD   +  LI  L R G+V
Sbjct: 156 CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKV 215

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           KKA      M   G  P++VTYN LI+ +C+   V    +L K +  K    PDVVTY +
Sbjct: 216 KKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKG-VQPDVVTYNT 274

Query: 338 VISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           +I+G   + +MD+A  +  EM      ++P  +TFN +I G  K+G M  A  +R  M  
Sbjct: 275 LITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAE 334

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   ++V F+ LI G  R  ++ + ++L DEM    L P+ +T++ILIN  CK  ++  
Sbjct: 335 NGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVER 394

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A  +L +++   + P+P  Y P++   C  G + +A  +  EM ++ CK D   ++ +I 
Sbjct: 395 AESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIH 453

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           G    G    A      M+  G  PD +T +  I+   K G    A R++++ +
Sbjct: 454 GAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMT 507



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 191/404 (47%), Gaps = 7/404 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL---PNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +YN V+ +LC  G  D+   +   M  +  L   PN+      + +     +   A GLL
Sbjct: 58  SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
              +   V      Y +L+  L    + D AV +  E      +P+   ++ L+ G  + 
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKT 177

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G  +   + F +M   G  PD+V Y  LI  LCR  +V +   ++ ++  +    P+VVT
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVM-DMMTERGLEPNVVT 236

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I+  CK G + +A  +   M+  G++P  VT+N LI G   V  M  A  + E M+
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296

Query: 395 S--FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
                  PD++TF+S+I G C+ G + Q L++   M       N+  F +LI  L + ++
Sbjct: 297 QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHK 356

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A   + ++  + L P  F Y+ +I+GFCK   V+ A   ++EM  +  +P+ V +  
Sbjct: 357 VKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIP 416

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           L+   C +G M +A  +FN+M R  C  D    +++I    K G
Sbjct: 417 LLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIHGAFKSG 459



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 202/444 (45%), Gaps = 38/444 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++R LC+    D+   + + M   G  PN  +    +    + G+ ++   +  + 
Sbjct: 131 TYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM 190

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     MY +L+++L +     +A  +         +P+  T+N+LI  + + G V
Sbjct: 191 SGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSV 250

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEFSPDVVTYT 336
           ++A +   +M   G  PD+VTYNTLI+GL  V E+     LL+E+ + ++   PD++T+ 
Sbjct: 251 REALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFN 310

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           SVI G CK+G M +A  +   M   G + + V FN+LI G  +V  +  A  + + M S 
Sbjct: 311 SVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASS 370

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T+S LI+G+C+  Q+ +      EM+ + + P    +  L+ A+C +  +  A
Sbjct: 371 GLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQA 430

Query: 457 R----------------------------------RFLKQLKWNDLVPKPFMYNPVIDGF 482
           R                                   FLK +    L+P    Y+  I+ F
Sbjct: 431 RDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMF 490

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K+G++  A  ++ +M      PD   F  LI G+  KG   + + +  +M     A D 
Sbjct: 491 AKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDP 550

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
             ++++++ L   G   E  +++Q
Sbjct: 551 KIISTIVTSL---GASIEGQKLLQ 571



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 148/281 (52%), Gaps = 4/281 (1%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKAT 352
           D V+YNT+++ LCR   +     LL+ +  +   +  P+ ++YT+++   C   +  +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           G+   M  CG++P  VT+  LI G     ++ +A  +   M   G  P+VV +S L+ GY
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G+     K+ +EM G+ + P+V  +T LI++LC+  ++  A R +  +    L P  
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             YN +I+  CK G+V EA  +   M EK  +PD VT+  LI G      M EA+++  +
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 533 MLR--IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           M++      PD +T NS+I  L K G   +A ++    +E+
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAEN 335



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 188/392 (47%), Gaps = 9/392 (2%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++ SLC  G       V D M   G  PN       ++S  + G    A  L     
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMS 261

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIGE 276
              V      YN+L+  L      DEA+ + +E  +  ++  PD  TFN +I GL +IG 
Sbjct: 262 EKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGW 321

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++A +    M   GC  ++V +N LI GL RV++V +  EL+ E+   S   PD  TY+
Sbjct: 322 MRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMA-SSGLQPDSFTYS 380

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G+CK+ ++++A    +EM   G++P  V +  L+      G M  A  +   M   
Sbjct: 381 ILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN 440

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             L D   +S++I G  ++G+     +   +M  + L P+  T++I IN   K   L  A
Sbjct: 441 CKL-DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAA 499

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD-KVTFTILI- 514
            R LKQ+  +  VP   +++ +I G+   G+ ++   +  EM  K    D K+  TI+  
Sbjct: 500 ERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTS 559

Query: 515 IGHCMKG-RMVEAISIFNKMLRIG--CAPDDI 543
           +G  ++G ++++++  F+  +  G   +P D+
Sbjct: 560 LGASIEGQKLLQSLPGFDTEISKGDVISPHDV 591


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 212/446 (47%), Gaps = 40/446 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++ +   +G   S++ V D MR +  +           +  +A   + A GL  + 
Sbjct: 62  TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121

Query: 218 R-PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS---QPDTWTFNILIQGLSR 273
               E   +   +NS+LN ++++     A+  +            P+  TFN++I+ + +
Sbjct: 122 AYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCK 181

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G V  A + F DM    C PD+ TY TL+ GLC+ + +     LL E++    F P  V
Sbjct: 182 VGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCF-PSPV 240

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T+  +I+G CK G + +   + + M   G  P+ VT+N LI G    G +  A  + +RM
Sbjct: 241 TFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM 300

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +S   +P+VVT+ ++I+G  + G+   G ++   M+ +    N Y ++ LI+ L KE + 
Sbjct: 301 VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKS 360

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP-------- 505
            +A +  K++   +      +Y+ VIDG C+ G  DEA  +++EM   RCKP        
Sbjct: 361 QEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSL 420

Query: 506 ---------------------------DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
                                      ++V +++LI G C  G++ EA+ ++ +ML  GC
Sbjct: 421 MKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGC 480

Query: 539 APDDITVNSLISCLLKGGMPNEAFRI 564
            PD +   S+I+ L   G+  +A ++
Sbjct: 481 KPDVVAYGSMINGLSNAGLVEDALQL 506



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 195/399 (48%), Gaps = 5/399 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN+S N    T+NLV++++C++GL D    +F  M      P+       +    +A + 
Sbjct: 163 VNISPN--VLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRI 220

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D A  LL + +      S   +N L+N L K+ +      +    F     P+  T+N L
Sbjct: 221 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTL 280

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL   G+++KA      M S  C P++VTY T+I+GL +      G  +L  ++ +  
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERG- 339

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           +  +   Y+++ISG  K GK  +A  ++ EM     + + + ++ +IDG  + G    A 
Sbjct: 340 YHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEAL 399

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   M +    P+  T+SSL+ G+   G  ++ +++  +M   N + N   +++LI+ L
Sbjct: 400 EVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGL 459

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKP 505
           CK+ ++ +A     Q+      P    Y  +I+G   AG V++A  +  EM  +E   +P
Sbjct: 460 CKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQP 519

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           D VT+ IL+   C +  +  AI + N ML  GC PD +T
Sbjct: 520 DVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT 558



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 3/312 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           F ++ +   +    +KA   F  M   F C   + ++N++++ + +     R  E    V
Sbjct: 98  FVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHV 157

Query: 323 KFKS--EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
                   SP+V+T+  VI   CK+G +D A  ++ +M     +P   T+  L+DG  K 
Sbjct: 158 IGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKA 217

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             +  A  + + M   G  P  VTF+ LI+G C+ G L +  KL D M  K  +PN  T+
Sbjct: 218 DRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTY 277

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI+ LC + +L  A   L ++  +  VP    Y  +I+G  K G   +   ++A MEE
Sbjct: 278 NTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEE 337

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +    ++  ++ LI G   +G+  EA+ +F +M    C  + I  +++I  L + G P+E
Sbjct: 338 RGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDE 397

Query: 561 AFRIMQRASEDQ 572
           A  ++   + ++
Sbjct: 398 ALEVLSEMTNNR 409



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 163/357 (45%), Gaps = 24/357 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++  LC  G  +    + D M S   +PN       ++  ++ G+      +L+  
Sbjct: 276 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALM 335

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++ ++Y++L++ L K+  + EA+ +FKE      + +T  ++ +I GL R G+ 
Sbjct: 336 EERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKP 395

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E   +M +  C P+  TY++L+ G        +  E+ K++  K  F+ + V Y+ 
Sbjct: 396 DEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMA-KHNFTQNEVCYSV 454

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--S 395
           +I G CK GK+ +A  ++ +M   G KP  V +  +I+G    G +  A  +   ML   
Sbjct: 455 LIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQE 514

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI------------- 442
               PDVVT++ L++  C+   +++ + L + M  +   P++ T  I             
Sbjct: 515 PDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQ 574

Query: 443 --------LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
                   L+  L K  R+  A + ++ +    L PKP  +  V++  C    V  A
Sbjct: 575 DGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAA 631



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 94/258 (36%), Gaps = 38/258 (14%)

Query: 117 LCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSV 175
           LC    P  +LEV+  + N +                 +  TY+ +M+   E G  H ++
Sbjct: 389 LCRDGKPDEALEVLSEMTNNRC--------------KPNAYTYSSLMKGFFEAGNGHKAI 434

Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
           ++  D M       N       +    + GK   A  + +Q            Y S++N 
Sbjct: 435 EMWKD-MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMING 493

Query: 236 LVKQNNADEAVYMFKEYF--RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
           L      ++A+ ++ E       SQPD  T+NIL+  L +   + +A +    M   GC 
Sbjct: 494 LSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCD 553

Query: 294 PDIVTYNTLISGLC-RVNEVARGHELLK-------------------EVKFKSEFSPDVV 333
           PD+VT    +  L  +++    G E L                    EV  +    P   
Sbjct: 554 PDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPS 613

Query: 334 TYTSVISGYCKLGKMDKA 351
           T+T V+   C   K+  A
Sbjct: 614 TWTRVVEDLCNPKKVQAA 631


>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
          Length = 542

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 182/346 (52%), Gaps = 3/346 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEY-FRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           ST  +N+LL++LV       A  +F+    +LY  P+  + NIL++GL  IG++  A + 
Sbjct: 163 STRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILLKGLVGIGDLNSALKV 222

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
             +M  +G  PD+VTY T+++  C   ++    +L  ++   S   PD   YT +I GYC
Sbjct: 223 LDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDI-IASGRRPDATMYTVLIDGYC 281

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
              K+  A  I +EM + G++P+ VT++V+I+   K      A  +   ML  GY+PD  
Sbjct: 282 HHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARDLTREMLGAGYVPDTP 341

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
             + ++D  C++G+  +  ++  +M  K++ P+    + LI  LCK+  + +AR+   +L
Sbjct: 342 LCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEARKLFDEL 401

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +    +P    YN +I G C+ G + EA  +  +M E+R +P+ +T+  LI G C  G+ 
Sbjct: 402 E-RGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKS 460

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            E  ++F +M+  GC P      +L+  L K    +    I++ A+
Sbjct: 461 NEGYALFKEMMSRGCTPSKFLYQALVDSLSKPSHDDTVCTIVEAAA 506



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 1/285 (0%)

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           +   F  + SF   P   ++N L+  L     +     L +    K   +P++V+   ++
Sbjct: 148 SLRLFLSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILL 207

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
            G   +G ++ A  + +EM   GI P  VT+  ++  +   G++  A+ + + +++ G  
Sbjct: 208 KGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGRR 267

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           PD   ++ LIDGYC + +L    ++ DEM    + PN  T++++I A CKE +  +AR  
Sbjct: 268 PDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARDL 327

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
            +++     VP   +   V+D  C+ G   EAN +  +M +K   PD    + LI   C 
Sbjct: 328 TREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCK 387

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           KG + EA  +F+++ R G  P  +T NSLI  L + G   EA R+
Sbjct: 388 KGMVQEARKLFDELER-GFLPSLLTYNSLIIGLCENGELQEAGRV 431



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 2/307 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       +   +  G  ++A  +L +     +      Y ++L A   + + + A  +
Sbjct: 198 PNLVSCNILLKGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQL 257

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F +      +PD   + +LI G     +++ A     +MG+ G  P+ VTY+ +I   C+
Sbjct: 258 FDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCK 317

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             +     +L +E+   + + PD      V+   C+ GK  +A  ++ +M    + P   
Sbjct: 318 ERKSTEARDLTREM-LGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNT 376

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
             + LI    K G +  A  + +  L  G+LP ++T++SLI G C NG+L +  ++ D+M
Sbjct: 377 VVSTLIYWLCKKGMVQEARKLFDE-LERGFLPSLLTYNSLIIGLCENGELQEAGRVWDDM 435

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             +   PN  T+  LI   CK  + N+     K++      P  F+Y  ++D   K  + 
Sbjct: 436 VERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSKPSHD 495

Query: 489 DEANVIV 495
           D    IV
Sbjct: 496 DTVCTIV 502


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 212/450 (47%), Gaps = 37/450 (8%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           ++ N ++     +G  D ++  F  M   G  P        +    + G  +AA GL  +
Sbjct: 99  RSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEE 158

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +   +   T  YNS+++   K    D+ VY F+E   +  +PD  T+N LI    + G+
Sbjct: 159 MKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGK 218

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + K  EFF +M   G  P++V+Y+TL+   C+ + + +  +   +++ +    P+  TYT
Sbjct: 219 LPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMR-RLGLVPNEHTYT 277

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++  YCK+G +  A  + +EM+  G++ + VT+  LIDG   V  +  AE +  +M++ 
Sbjct: 278 SLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTA 337

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G +P++ ++++LI G+ +   +++ L+L DEMKG+ + P++  +   I +LC   ++  A
Sbjct: 338 GVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAA 397

Query: 457 RRFLKQLKWNDLVPKPFMY-----------NP------------------------VIDG 481
           +  + +++   +    F+Y           NP                        +IDG
Sbjct: 398 KVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDG 457

Query: 482 FCKAGNVDEANVIVAEMEEK-RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            CK   V +A      +      + +   +T +I G C + ++  A ++F +M + G  P
Sbjct: 458 LCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVP 517

Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           D     SLI   LK G   +A  +  + +E
Sbjct: 518 DRTAYTSLIDGKLKQGNVVQALALRDKMAE 547



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 185/384 (48%), Gaps = 3/384 (0%)

Query: 178 VFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
           VFD + S  ++  P   + +   S  I     + A    S+ +   V   T   N LL+ 
Sbjct: 48  VFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHK 107

Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
             +    D     FK+     S+P  +T+NI+I  + + G+++ A   F +M   G  PD
Sbjct: 108 FARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPD 167

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
            VTYN++I G  +V  +       +E+K  S   PDV+TY ++I+ +CK GK+ K    +
Sbjct: 168 TVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS-CEPDVITYNTLINCFCKFGKLPKGLEFF 226

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            EM   G+KP+ V+++ L+D F K   M  A      M   G +P+  T++SL+D YC+ 
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKI 286

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G L+   +L DEM    +  NV T+T LI+ LC   R+ +A     ++    ++P    Y
Sbjct: 287 GNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASY 346

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
             +I GF KA N+D A  ++ EM+ +  KPD + +   I   C   ++  A  + N+M  
Sbjct: 347 TALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQE 406

Query: 536 IGCAPDDITVNSLISCLLKGGMPN 559
            G   +     +L+    K   P+
Sbjct: 407 KGIKANTFIYTTLMDAYFKSENPS 430



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 1/359 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F  ++ +   L E  + +     F  M+     P +      +    R GK D  K    
Sbjct: 63  FGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFK 122

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                    + F YN +++ + K+ + + A  +F+E       PDT T+N +I G  ++G
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVG 182

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +     FF +M S  C PD++TYNTLI+  C+  ++ +G E  +E+K +S   P+VV+Y
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMK-QSGLKPNVVSY 241

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           ++++  +CK   M +A   Y +M   G+ P+  T+  L+D + K+GN+  A  + + M  
Sbjct: 242 STLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQ 301

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   +VVT+++LIDG C   ++ +  +L  +M    + PN+ ++T LI+   K   ++ 
Sbjct: 302 VGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDR 361

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           A   L ++K   + P   +Y   I   C    ++ A V++ EM+EK  K +   +T L+
Sbjct: 362 ALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLM 420



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 169/338 (50%), Gaps = 36/338 (10%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
           ++++L + L++++  +EA+  F +  R    P T + N L+   +R+G+      FF DM
Sbjct: 65  VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM 124

Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
              G  P                                     V TY  +I   CK G 
Sbjct: 125 IGAGSKPT------------------------------------VFTYNIMIDCMCKEGD 148

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
           ++ A+G++ EM   G+ P  VT+N +IDG+GKVG +    Y  E M S    PDV+T+++
Sbjct: 149 IEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNT 208

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI+ +C+ G+L +GL+   EMK   L PNV +++ L++A CKE+ +  A +F   ++   
Sbjct: 209 LINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG 268

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           LVP    Y  ++D +CK GN+ +A  +  EM +   + + VT+T LI G C   R+ EA 
Sbjct: 269 LVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAE 328

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +F KM+  G  P+  +  +LI   +K    + A  ++
Sbjct: 329 ELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELL 366



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 2/211 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++    +    D    + D M+  G  P+  +   F+ S     K +AAK ++++ 
Sbjct: 345 SYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEM 404

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   +  +TF+Y +L++A  K  N  E +++ +E   L  +    TF +LI GL +   V
Sbjct: 405 QEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLV 464

Query: 278 KKAFEFFYDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            KA ++F  + + FG   +   Y  +I GLC+ ++V     L +++  K    PD   YT
Sbjct: 465 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKG-LVPDRTAYT 523

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           S+I G  K G + +A  + ++M   G++  A
Sbjct: 524 SLIDGKLKQGNVVQALALRDKMAEIGVESGA 554



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 2/254 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E S+V +  N    TY  ++  LC++      + +F  M + G +PN       +   ++
Sbjct: 298 EMSQVGVEWN--VVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVK 355

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
           A   D A  LL + +   +     +Y + + +L      + A  +  E      + +T+ 
Sbjct: 356 AKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFI 415

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  L+    +     +      +M         VT+  LI GLC+   V++  +    + 
Sbjct: 416 YTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRIS 475

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                  +   YT++I G CK  +++ AT ++ +M   G+ P    +  LIDG  K GN+
Sbjct: 476 NDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNV 535

Query: 384 VSAEYMRERMLSFG 397
           V A  +R++M   G
Sbjct: 536 VQALALRDKMAEIG 549


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 203/453 (44%), Gaps = 54/453 (11%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-- 217
           N V+   C  G  D  + + D MR+ G  PN       +S+  +AG+   A  + +    
Sbjct: 209 NTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQE 268

Query: 218 -------RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK-----EYFRLYSQPDTWTFN 265
                  RP +VT     ++ +L+        DEA  +        + R     + W   
Sbjct: 269 AWEQGLPRPDQVT-----FDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRW--- 320

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN---EVARGHELLKEV 322
             + GL + G V +A E   +M   G  P+  TYN ++ GLC+     +V R  + ++  
Sbjct: 321 --LSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVR-- 376

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
                 +PDVVTYTS++  YC  G    A  I +EM   G  P+  T+NVL+    K G 
Sbjct: 377 --SGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGR 434

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK------------- 429
               E + ERM   GY  D  + + +IDG CRN +L   + + D M              
Sbjct: 435 TTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNS 494

Query: 430 ----------GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
                      K+  P+  T++ L+NALCKE R ++A++ L ++   D+ P   +Y+  I
Sbjct: 495 FVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFI 554

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
            G+C  G    A  ++ +ME++ C P   ++ +LI G   K +  E + + ++M   G +
Sbjct: 555 HGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGIS 614

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
            + +T NSLI      GM N+A  ++    +++
Sbjct: 615 SNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNE 647



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 173/373 (46%), Gaps = 13/373 (3%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           G  P +P+    + + +R  + D  + L         T   F  N+LL AL      D A
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLA 162

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
               +  F      + ++  IL +G  R G    A      M       ++V  NT+++G
Sbjct: 163 ----RRVFDAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEM----NLVVCNTVVAG 214

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC---G 362
            CR   V     L+  ++ +   +P+VVT+   IS  CK G++ +A  I+N+M      G
Sbjct: 215 FCREGRVDEAERLVDRMRAQG-LAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQG 273

Query: 363 I-KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           + +P  VTF+V++ GF   G +  A  + + M   G+L  V +++  + G  +NG++ + 
Sbjct: 274 LPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEA 333

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +L  EM  + + PN YT+ I+++ LCKE +  D RR    ++   + P    Y  ++  
Sbjct: 334 QELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHA 393

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +C  GN   AN I+ EM +K C P+  T+ +L+      GR  E   +  +M   G + D
Sbjct: 394 YCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLD 453

Query: 542 DITVNSLISCLLK 554
             + N +I  L +
Sbjct: 454 TASCNIIIDGLCR 466



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 191/412 (46%), Gaps = 15/412 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++   C+ G+ D   V+ D MR  G L        ++S  ++ G+   A+ LLS+ 
Sbjct: 281 TFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEM 340

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL-YSQPDTWTFNILIQGLSRIGE 276
               V  +++ YN +++ L K+  A + V   +++ R     PD  T+  L+      G 
Sbjct: 341 AHEGVQPNSYTYNIIVDGLCKEGKAFD-VRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGN 399

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A     +M   GC+P++ TYN L+  L +         LL+ +  K  +S D  +  
Sbjct: 400 TTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKG-YSLDTASCN 458

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G C+  K++ A  I + M           +N       ++GN      + +  +S 
Sbjct: 459 IIIDGLCRNSKLEMAMDIVDGM-----------WNEGRLALRRLGNSF-VSLVSDSSISK 506

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
             LPD +T+S+L++  C+ G+ ++  K   EM GK++SP+   +   I+  C   + + A
Sbjct: 507 SCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLA 566

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L+ ++     P    YN +I GF +    DE   +++EM+EK    + +T+  LI  
Sbjct: 567 IKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKS 626

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            C +G + +A+ + ++ML+    P+  +   LI    K    + A R+   A
Sbjct: 627 FCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVA 678



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 182/436 (41%), Gaps = 25/436 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  LC+ G    V+ V D++RS    P+       + +    G   AA  +L + 
Sbjct: 351 TYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEM 410

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  + F YN LL +L+K     E   + +         DT + NI+I GL R  ++
Sbjct: 411 AQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKL 470

Query: 278 KKAFEFFYDMGSFG-----------------------CSPDIVTYNTLISGLCRVNEVAR 314
           + A +    M + G                       C PD +TY+TL++ LC+      
Sbjct: 471 EMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDE 530

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
             + L E+  K + SPD V Y + I GYC  GK   A  +  +M      PS  ++N+LI
Sbjct: 531 AKKKLVEMIGK-DISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLI 589

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            GF +         +   M   G   +V+T++SLI  +C  G +N+ + L DEM    + 
Sbjct: 590 WGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIV 649

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PNV +F +LI A CK    + A+R    +  +    K  +Y  +           EA  I
Sbjct: 650 PNVTSFGLLIKAFCKTADFSAAQRVF-DVALSTCGQKEVLYCLMCTELSTYARWIEAKNI 708

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +    E R       +  +I G C       A S+    +  G + D  T   +I  L +
Sbjct: 709 LETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSE 768

Query: 555 GGMPNEAFRIMQRASE 570
            G  ++A  + ++  E
Sbjct: 769 SGKKHDADMLSEKMME 784



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 15/188 (7%)

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P    ++ L+    R  +L+    L  ++     +P+V+T   L+ AL    R++ A
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLA 162

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           RR    +   +     F    +  G+C+AG   +A  ++  M E     + V    ++ G
Sbjct: 163 RRVFDAMPARN----EFSSGILARGYCRAGRSADALAVLDAMPEM----NLVVCNTVVAG 214

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
            C +GR+ EA  + ++M   G AP+ +T N  IS L K G   EA+RI     E      
Sbjct: 215 FCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQE------ 268

Query: 577 PSWKKAVP 584
            +W++ +P
Sbjct: 269 -AWEQGLP 275


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 184/368 (50%), Gaps = 23/368 (6%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK---EYFRLYSQ-------PDTWTFNI 266
           F+P  VT     +N+LL+ L  ++   EA+ +F    E   L+ Q       P   TFN 
Sbjct: 172 FQPDVVT-----FNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI GL   G V +A      M   G   D+VTY T+++G+C++ +      LL +++ ++
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ET 285

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PDVV Y+++I   CK G    A  +++EM   GI P+  T+N +IDGF   G    A
Sbjct: 286 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 345

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + +   M+     PDV+TF++LI    + G+L +  KLCDEM  + + P+  T+  +I  
Sbjct: 346 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 405

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK NR +DA+     +   D+V     +N +ID +C+A  VDE   ++ E+  +    +
Sbjct: 406 FCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 461

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FR 563
             T+  LI G C    +  A  +F +M+  G  PD IT N L+    +     EA   F 
Sbjct: 462 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 521

Query: 564 IMQRASED 571
           ++Q +  D
Sbjct: 522 VIQMSKID 529



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 184/381 (48%), Gaps = 15/381 (3%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           FDYM        +      +   +R  + D A  L  +     + ++ + +N L+     
Sbjct: 94  FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRIGEVKKAFEFFYDMGSF----- 290
            +    ++  F +  +L  QPD  TFN L+ GL    RI E    F +  + GS      
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMV 213

Query: 291 --GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G +P ++T+NTLI+GLC    V     L+ ++  K     DVVTY ++++G CK+G  
Sbjct: 214 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDT 272

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  + ++M    IKP  V ++ +ID   K G+   A+Y+   ML  G  P+V T++ +
Sbjct: 273 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 332

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG+C  G+ +   +L  +M  + ++P+V TF  LI+A  KE +L +A +   ++    +
Sbjct: 333 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 392

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I GFCK    D+A      M +    PD VTF  +I  +C   R+ E + 
Sbjct: 393 FPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 448

Query: 529 IFNKMLRIGCAPDDITVNSLI 549
           +  ++ R G   +  T N+LI
Sbjct: 449 LLREISRRGLVANTTTYNTLI 469



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 201/408 (49%), Gaps = 6/408 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  +C+MG   S   +   M      P+  +    +    + G    A+ L S+ 
Sbjct: 258 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 317

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + F YN +++         +A  + ++       PD  TFN LI    + G++
Sbjct: 318 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 377

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M      PD VTYN++I G C+ N       +     F    SPDVVT+ +
Sbjct: 378 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM-----FDLMASPDVVTFNT 432

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YC+  ++D+   +  E++  G+  +  T+N LI GF +V N+ +A+ + + M+S G
Sbjct: 433 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 492

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +T + L+ G+C N +L + L+L + ++   +  +   + I+I+ +CK +++++A 
Sbjct: 493 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 552

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L  + + P    YN +I GFC    + +ANV+  +M++   +PD  T+  LI G 
Sbjct: 553 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 612

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              G + ++I + ++M   G + D  T+  +++ L+  G  +++F  M
Sbjct: 613 LKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFSDM 659



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 217/480 (45%), Gaps = 51/480 (10%)

Query: 134 DNPKLGLKFLEFSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN-- 190
           D  KL      F ++  L       T+N ++  LC          +F YM   G L +  
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQM 212

Query: 191 -----SPMIEFF---VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
                +P++  F   ++     G+   A  L+++     + +    Y +++N + K  + 
Sbjct: 213 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 272

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
             A+ +  +    + +PD   ++ +I  L + G    A   F +M   G +P++ TYN +
Sbjct: 273 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 332

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G C     +    LL+++  + E +PDV+T+ ++IS   K GK+ +A  + +EM    
Sbjct: 333 IDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 391

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I P  VT+N +I GF K      A++M + M S    PDVVTF+++ID YCR  ++++G+
Sbjct: 392 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 447

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM-------- 474
           +L  E+  + L  N  T+  LI+  C+ + LN A+   +++  + + P            
Sbjct: 448 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 507

Query: 475 ---------------------------YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
                                      YN +I G CK   VDEA  +   +     +PD 
Sbjct: 508 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 567

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+ ++I G C K  + +A  +F+KM   G  PD+ T N+LI   LK G  +++  ++  
Sbjct: 568 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 627



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 176/349 (50%), Gaps = 13/349 (3%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N ++   V+ N  D A+ ++++        + ++FNILI+      ++  +   F  +  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHEL---------LKEVKFKSEFSPDVVTYTSVIS 340
            G  PD+VT+NTL+ GLC  + ++    L         L +   +   +P V+T+ ++I+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G C  G++ +A  + N+M   G+    VT+  +++G  K+G+  SA  +  +M      P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           DVV +S++ID  C++G  +    L  EM  K ++PNV+T+  +I+  C   R +DA+R L
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           + +   ++ P    +N +I    K G + EA  +  EM  +   PD VT+  +I G C  
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            R  +A  +F+ M     +PD +T N++I    +    +E  ++++  S
Sbjct: 410 NRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 454



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           V  + +I  + R  + +  + L  +M+ + +  N+Y+F ILI   C  ++L+ +     +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA----------EMEEKRCKPDKVTFTI 512
           L      P    +N ++ G C    + EA  +            +M E    P  +TF  
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           LI G C++GR++EA ++ NKM+  G   D +T  ++++ + K G    A  ++ +  E
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 284


>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 194/407 (47%), Gaps = 6/407 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ + C     D    V   M   G  P+       +S  +R      +  L  + 
Sbjct: 50  TYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEM 109

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + +N L+N L +    DEA  +FKE   L  +    T+NI+I GL + G V
Sbjct: 110 LKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIV-LRDEVHPATYNIMINGLCKNGYV 168

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F ++   G  P ++TYN LI+GLC+   +     +LKE   ++   P+ VTYT+
Sbjct: 169 GNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFG-ETGNEPNAVTYTT 227

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           V++   +    ++   I +EM S G       +  +I    K G M  AE + E M+S G
Sbjct: 228 VMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSG 287

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+V++++LI+ YCR G+L+  L+L DE++G+ L  + YT TI+++ LCK    + A+
Sbjct: 288 VRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQ 347

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R L  +           +N  +DG  KAG++D A  +   ME K    D  T+TI++   
Sbjct: 348 RHLNYMNSLGFGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEVK----DSFTYTIVVHNL 403

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           C   R + A  +    L+ G      T  ++I  L   G  NEA ++
Sbjct: 404 CRARRFLCASKVLVSCLKCGYQVLRATQRAVIVGLRSIGYANEARKV 450



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 179/380 (47%), Gaps = 4/380 (1%)

Query: 155 SFKTYNLVMRSLCEM-GLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           S K  N+ + SLC+   + ++   + D +R  G LP+       + +  R    D A  +
Sbjct: 12  STKLLNITVSSLCKAKQIPNAETAIVDGIRL-GVLPDVVTYNTLIDAYCRFATLDVAYSV 70

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L++     +      +N+L++  V+++   +++ +F E  +    PD W+ NIL+  L +
Sbjct: 71  LARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQ 130

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
           +G+  +A   F ++          TYN +I+GLC+   V     L + ++ +  F P V+
Sbjct: 131 LGKPDEANRVFKEI-VLRDEVHPATYNIMINGLCKNGYVGNALSLFRNLQ-RHGFVPQVL 188

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++I+G CK  ++  A  +  E    G +P+AVT+  ++    +         +   M
Sbjct: 189 TYNALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEM 248

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            S G+  D   + ++I    + G++ +  ++ + M    + P++ ++  LIN  C++ RL
Sbjct: 249 RSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRL 308

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +DA R L +++   L    + +  ++DG CKAGN D A   +  M       + V F   
Sbjct: 309 DDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCF 368

Query: 514 IIGHCMKGRMVEAISIFNKM 533
           + G    G +  A+ +F  M
Sbjct: 369 LDGLGKAGHIDHALRLFEVM 388



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 179/378 (47%), Gaps = 4/378 (1%)

Query: 190 NSPMIEFFVSSCIRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           ++ ++   VSS  +A +  +A   ++   R G V      YN+L++A  +    D A  +
Sbjct: 12  STKLLNITVSSLCKAKQIPNAETAIVDGIRLG-VLPDVVTYNTLIDAYCRFATLDVAYSV 70

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
                     PD  +FN LI G  R     K+ + F +M   G +PD  ++N L++ L +
Sbjct: 71  LARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQ 130

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
           + +    + + KE+  + E  P   TY  +I+G CK G +  A  ++  +   G  P  +
Sbjct: 131 LGKPDEANRVFKEIVLRDEVHP--ATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVL 188

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+N LI+G  K   +  A  + +     G  P+ VT+++++    R     +GL++  EM
Sbjct: 189 TYNALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEM 248

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           +    + + + +  +I A+ K  R+ +A   ++ +  + + P    YN +I+ +C+ G +
Sbjct: 249 RSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRL 308

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           D+A  ++ E+E +  + D+ T TI++ G C  G    A    N M  +G   + +  N  
Sbjct: 309 DDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCF 368

Query: 549 ISCLLKGGMPNEAFRIMQ 566
           +  L K G  + A R+ +
Sbjct: 369 LDGLGKAGHIDHALRLFE 386



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 1/208 (0%)

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           S    N+ +    K   + +AE      +  G LPDVVT+++LID YCR   L+    + 
Sbjct: 12  STKLLNITVSSLCKAKQIPNAETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVAYSVL 71

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
             M    + P+V +F  LI+   +++  + +     ++    + P  + +N +++   + 
Sbjct: 72  ARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQL 131

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G  DEAN +  E+   R +    T+ I+I G C  G +  A+S+F  + R G  P  +T 
Sbjct: 132 GKPDEANRVFKEIV-LRDEVHPATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTY 190

Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQN 573
           N+LI+ L K     +A R+++   E  N
Sbjct: 191 NALINGLCKARRLKDARRVLKEFGETGN 218



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 9/258 (3%)

Query: 124 LNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMR 183
           +N L   +RL + +  LK  EF       N    TY  VM       L +    +   MR
Sbjct: 194 INGLCKARRLKDARRVLK--EFGETGNEPNAV--TYTTVMTCCFRCRLFEEGLEILSEMR 249

Query: 184 SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           S G   +       +++ I+ G+   A+ ++       V      YN+L+N   +Q   D
Sbjct: 250 SLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLD 309

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
           +A+ +  E      + D +T  I++ GL + G    A      M S G   ++V +N  +
Sbjct: 310 DALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFL 369

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
            GL +   +     L + ++ K  F     TYT V+   C+  +   A+ +      CG 
Sbjct: 370 DGLGKAGHIDHALRLFEVMEVKDSF-----TYTIVVHNLCRARRFLCASKVLVSCLKCGY 424

Query: 364 KPSAVTFNVLIDGFGKVG 381
           +    T   +I G   +G
Sbjct: 425 QVLRATQRAVIVGLRSIG 442


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 196/377 (51%), Gaps = 5/377 (1%)

Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           + +++  +S     G  D A   +++ R   V  +T   N +L  L +    D +  + +
Sbjct: 122 ASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVR 177

Query: 251 EYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
             F     P+ +TFNI+I  L + GE+ +A   F  M   GC PD+VT+N+LI G  +  
Sbjct: 178 RLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCG 237

Query: 311 EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
           E+    +L++E++ +S    DVVTY ++I+ +CK G+M+ A G +  M   G+  + VTF
Sbjct: 238 ELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF 296

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
           +  +D F K G +  A  +  +M   G   +  T++ LIDG C+ G+L+  + L DEM  
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + +  NV T+T+L++ LCKE ++ +A   L+ ++   +     +Y  +I G     N ++
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  +++EM+ K  + D   +  LI G C   ++ EA S+  KM   G  P+ I   +++ 
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476

Query: 551 CLLKGGMPNEAFRIMQR 567
              K G   EA  ++Q+
Sbjct: 477 ACFKSGKVPEAIAMLQK 493



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 5/341 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           ++LL+ L  +   D+AV        L   P+T T N ++  L+R    +     F  + +
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               P++ T+N +I  LC+  E+A    L   +K +    PDVVT+ S+I GY K G++D
Sbjct: 186 ----PNVFTFNIVIDFLCKEGELAEARSLFSRMK-EMGCLPDVVTFNSLIDGYGKCGELD 240

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +   +  EM   G K   VT+N LI+ F K G M +A      M   G + +VVTFS+ +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           D +C+ G + + +KL  +M+ + ++ N +T+T LI+  CK  RL+DA   L ++    + 
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                Y  ++DG CK   V EA  ++  ME+   + +++ +T LI GH M     +A+ +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            ++M   G   D     +LI  L      +EA  ++ +  E
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 184/388 (47%), Gaps = 15/388 (3%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN       +    + G+   A+ L S+ +          +NSL++   K    DE   +
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
            +E  R   + D  T+N LI    + G ++ A+ +F  M   G   ++VT++T +   C+
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
              V    +L  +++ +   + +  TYT +I G CK G++D A  + +EM   G+  + V
Sbjct: 306 EGLVREAMKLFAQMRVRG-MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           T+ VL+DG  K   +  AE +   M   G   + + +++LI G+  N    + L L  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
           K K L  ++  +  LI  LC  ++L++A+  L ++  + L P   +Y  ++D   K+G V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            EA  ++ ++ +   +P+              G + EA+ +FN+M+  G + D +   +L
Sbjct: 485 PEAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVHKGMSLDKVVYTAL 531

Query: 549 ISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           +   LK G  ++AF +  +   D  LQL
Sbjct: 532 LDGYLKQGNLHDAFALKAKMI-DSGLQL 558



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 183/415 (44%), Gaps = 23/415 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+V+  LC+ G     + +F  M+  G LP+       +    + G+ D  + L+ + 
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R          YN+L+N   K    + A   F    R     +  TF+  +    + G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + F  M   G + +  TY  LI G C+   +     LL E+  +     +VVTYT 
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM-VRQGVPLNVVTYTV 368

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G CK  K+ +A  +   M   G++ + + +  LI G     N   A  +   M + G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+  + +LI G C   +L++   L  +M    L PN   +T +++A  K  ++ +A 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 458 RFLKQL-----------------KWNDLVPK-----PFMYNPVIDGFCKAGNVDEANVIV 495
             L+++                  +N++V K       +Y  ++DG+ K GN+ +A  + 
Sbjct: 489 AMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALK 548

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A+M +   + D   +T  I G C    M EA  +F++M+  G APD    N LI+
Sbjct: 549 AKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIT 603



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 142/347 (40%), Gaps = 58/347 (16%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G  ++    F  M+ +G + N      FV +  + G    A  L +Q 
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   + ++ F Y  L++   K    D+A+ +  E  R     +  T+ +L+ GL +  +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 278 -----------------------------------KKAFEFFYDMGSFGCSPDIVTYNTL 302
                                              +KA     +M + G   DI  Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK--------------- 347
           I GLC V+++     LL ++  +S   P+ + YT+++    K GK               
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMD-ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498

Query: 348 -------MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
                  +++A  ++NEM   G+    V +  L+DG+ K GN+  A  ++ +M+  G   
Sbjct: 499 FQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQL 558

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
           D+  ++  I G+C    + +  ++  EM G  ++P+   +  LI  +
Sbjct: 559 DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQI 605



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 22/191 (11%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  L      Y  +++ LC +   D  + +   M   G  PN  +    + +C ++GK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 209 AAKGLL-----SQFRPGE-----------------VTMSTFMYNSLLNALVKQNNADEAV 246
            A  +L     S F+P                   +++   +Y +LL+  +KQ N  +A 
Sbjct: 486 EAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAF 545

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +  +      Q D + +   I G   +  + +A E F +M   G +PD   YN LI+ +
Sbjct: 546 ALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQI 605

Query: 307 CRVNEVARGHE 317
             + E+  G++
Sbjct: 606 PEIRELGGGNK 616


>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
          Length = 661

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++P+    +S+  RA   DAA  LL+  +   +T  +    +L+++L       EA  +
Sbjct: 219 PDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEAL 278

Query: 249 FKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           F E+F     +P T  +N L++G  +IG +K A +   +M   G +PD  TY+ L+    
Sbjct: 279 FLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 338

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           R         LLKE++      P    ++ +++G+   G+  KA  +  EM++ G++P  
Sbjct: 339 RAGRWESARILLKEMEADG-VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDR 397

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             +NV+ID FGK   +  A    +RM   G  PDVVT+++LID +C+ G+ ++ ++L DE
Sbjct: 398 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 457

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+  N      T+ I+IN L +E R       L ++K   LVP    Y  ++D + ++G 
Sbjct: 458 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGR 517

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             EA   +  M+    KP    +  L+  +  +G    A+++   M   G     + +NS
Sbjct: 518 FKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 577

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           LI+   +     EAF ++Q
Sbjct: 578 LINAFGEDRRIAEAFSVLQ 596



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 185/412 (44%), Gaps = 39/412 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FLEF      +    + YN +++   ++G   + + V D M   G  P+       V + 
Sbjct: 279 FLEFFLAG-EIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 337

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            RAG+ ++A+ LL                       K+  AD              +P +
Sbjct: 338 TRAGRWESARILL-----------------------KEMEADGV------------KPSS 362

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           + F+ ++ G    GE +KAF    +M + G  PD   YN +I    + N +  GH +   
Sbjct: 363 YVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL--GHAMDAF 420

Query: 322 VKFKSE-FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            + + E   PDVVT+ ++I  +CK G+ D+A  +++EM          T+N++I+  G+ 
Sbjct: 421 DRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEE 480

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
                 E M   M   G +P+++T+++L+D Y R+G+  + +   + MK   L P+   +
Sbjct: 481 QRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMY 540

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             L+NA  +    + A   +K ++ + L     + N +I+ F +   + EA  ++  M+E
Sbjct: 541 HALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 600

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              +PD +T+T L+       +  +   I+ +M+  GCAPD      L S L
Sbjct: 601 NGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSAL 652



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 134/306 (43%), Gaps = 4/306 (1%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PD   F+ LI   +R      A E      + G +P       LIS L     VA    
Sbjct: 218 EPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEA 277

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E     E  P    Y +++ GY K+G +  A  + +EM+ CG+ P   T+++L+D +
Sbjct: 278 LFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 337

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G   SA  + + M + G  P    FS ++ G+   G+  +   +  EM    + P+ 
Sbjct: 338 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDR 397

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           + + ++I+   K N L  A     +++   + P    +N +ID  CK G  D A  +  E
Sbjct: 398 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 457

Query: 498 MEEKRCKPDKVTFTILI--IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           M E  C     T+ I+I  +G   +   VEA  +  +M   G  P+ IT  +L+    + 
Sbjct: 458 MRESNCPLGTTTYNIMINLLGEEQRWEGVEA--MLAEMKEQGLVPNIITYTTLVDVYGRS 515

Query: 556 GMPNEA 561
           G   EA
Sbjct: 516 GRFKEA 521


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 206/422 (48%), Gaps = 4/422 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T +++M SLC+ G     + VFD M   G  P+       ++     G       L    
Sbjct: 339 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 398

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + +N L+ A       D+A+ +F E      +PD  T+  +I  L RIG++
Sbjct: 399 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 458

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   G +PD   YN LI G C    + +  EL+ E+   +    D+V ++S
Sbjct: 459 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI-MNNGMHLDIVFFSS 517

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CKLG++  A  I++   + G+ P AV +++L+DG+  VG M  A  + + M+S G
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV + +L++GYC+ G++++GL L  EM  + + P+   ++I+I+ L +  R   A+
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  + +      YN V+ G  K    DEA  +  E+     K + +T   +I G 
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
               R+ EA  +F  + R    P+ +T + +I+ L+K G+  EA   F  MQ A  + N 
Sbjct: 698 FQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 757

Query: 575 QL 576
           +L
Sbjct: 758 RL 759



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 194/435 (44%), Gaps = 36/435 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +Y+++++SLC+ G       +   M   G +  PN       +    + G  + A  L  
Sbjct: 197 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +      YNS+++AL K    D+A    ++       P+ WT+N LI G S  G
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 316

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-------- 327
           + K+A   F +M      PD+VT + L+  LC+  ++    ++   +  K +        
Sbjct: 317 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 376

Query: 328 --------------------------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                                      +PD  T+  +I  Y   G +DKA  I+NEM   
Sbjct: 377 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 436

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+KP  VT+  +I    ++G M  A     +M+  G  PD   ++ LI G+C +G L + 
Sbjct: 437 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 496

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +L  E+    +  ++  F+ +IN LCK  R+ DA+          L P   +Y+ ++DG
Sbjct: 497 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 556

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +C  G +++A  +   M     +P+ V +  L+ G+C  GR+ E +S+F +ML+ G  P 
Sbjct: 557 YCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 616

Query: 542 DITVNSLISCLLKGG 556
            I  + +I  L + G
Sbjct: 617 TILYSIIIDGLFQAG 631



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 177/365 (48%), Gaps = 4/365 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-Y 247
           P S      +  C RA + + A     Q     + ++  + N LL    +    DEA+  
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISG 305
           +      L   PD ++++IL++ L   G+  +A +    M   G  CSP++V YNT+I G
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             +  +V +  +L KE+  +    PD+VTY SV+   CK   MDKA     +M +  + P
Sbjct: 242 FFKEGDVNKACDLFKEM-VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 300

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +  T+N LI G+   G    A  + + M     LPDVVT S L+   C+ G++ +   + 
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 360

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K  +P+V+++ I++N    +  L D       +  + + P  + +N +I  +   
Sbjct: 361 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 420

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D+A +I  EM +   KPD VT+  +I   C  G+M +A+  FN+M+  G APD    
Sbjct: 421 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 480

Query: 546 NSLIS 550
           N LI 
Sbjct: 481 NCLIQ 485



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 209/442 (47%), Gaps = 7/442 (1%)

Query: 127 LEVIKRLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRS 184
           ++   R   P+L L F  +  R  L +N      N ++   CE    D ++ ++      
Sbjct: 131 MDCCTRAHRPELALAFFGQLLRTGLRVN--IIIANHLLEGFCEAKRTDEALDILLHRTPE 188

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNA 242
            G +P+       + S    GK   A  LL     G    S     YN++++   K+ + 
Sbjct: 189 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 248

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++A  +FKE  +    PD  T+N ++  L +   + KA  F   M +    P+  TYN L
Sbjct: 249 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 308

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G     +      + KE++ +    PDVVT + ++   CK GK+ +A  +++ M   G
Sbjct: 309 IYGYSSTGQWKEAVRVFKEMR-RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 367

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P   ++N++++G+   G +V    + + ML  G  PD  TF+ LI  Y   G L++ +
Sbjct: 368 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 427

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM+   + P+V T+  +I ALC+  +++DA     Q+    + P  + YN +I GF
Sbjct: 428 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 487

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G++ +A  +++E+       D V F+ +I   C  GR+++A +IF+  + +G  PD 
Sbjct: 488 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 547

Query: 543 ITVNSLISCLLKGGMPNEAFRI 564
           +  + L+      G   +A R+
Sbjct: 548 VVYSMLMDGYCLVGKMEKALRV 569



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 192/397 (48%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++      G    +  +FD M  DG  P+       + +    G  D A  + ++ 
Sbjct: 374 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      Y +++ AL +    D+A+  F +       PD + +N LIQG    G +
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 493

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E   ++ + G   DIV ++++I+ LC++  V     +  ++       PD V Y+ 
Sbjct: 494 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYSM 552

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC +GKM+KA  +++ M S GI+P+ V +  L++G+ K+G +     +   ML  G
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 612

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + +S +IDG  + G+         EM    ++ ++ T+ I++  L K    ++A 
Sbjct: 613 IKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 672

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+L+  ++       N +IDG  +   V+EA  + A +   R  P+ VT++I+I   
Sbjct: 673 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNL 732

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +G + EA  +F+ M   GC P+   +N ++  LLK
Sbjct: 733 IKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 769



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 188/405 (46%), Gaps = 1/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+ +LC+    D  +     M +   LPN+      +      G+   A  +  + 
Sbjct: 269 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +       + L+ +L K     EA  +F         PD +++NI++ G +  G +
Sbjct: 329 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 388

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               + F  M   G +PD  T+N LI        + +   +  E++      PDVVTY +
Sbjct: 389 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYRT 447

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+  C++GKMD A   +N+M   G+ P    +N LI GF   G+++ A+ +   +++ G
Sbjct: 448 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 507

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+V FSS+I+  C+ G++     + D      L P+   +++L++  C   ++  A 
Sbjct: 508 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 567

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R    +    + P   +Y  +++G+CK G +DE   +  EM ++  KP  + ++I+I G 
Sbjct: 568 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              GR V A   F++M   G A D  T N ++  L K    +EA 
Sbjct: 628 FQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 672



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 190/410 (46%), Gaps = 1/410 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F T+N+++++    G+ D   ++F+ MR  G  P+       +++  R GK D A    +
Sbjct: 407 FYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 466

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           Q     V    + YN L+       +  +A  +  E        D   F+ +I  L ++G
Sbjct: 467 QMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 526

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V  A   F    + G  PD V Y+ L+ G C V ++ +   +  +    +   P+VV Y
Sbjct: 527 RVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVVY 585

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++++GYCK+G++D+   ++ EM   GIKPS + ++++IDG  + G  V A+     M  
Sbjct: 586 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTE 645

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D+ T++ ++ G  +N   ++ + L  E++  N+  N+ T   +I+ + +  R+ +
Sbjct: 646 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 705

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+     +  + LVP    Y+ +I    K G V+EA  + + M+   C+P+      ++ 
Sbjct: 706 AKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 765

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
               K  +V A +  +K+     + + +T   L+      G   E  R +
Sbjct: 766 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 2/308 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P + T+ IL+   +R    + A  FF  +   G   +I+  N L+ G C         ++
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI--KPSAVTFNVLIDG 376
           L     +    PDV +Y+ ++   C  GK  +A  +   M   G    P+ V +N +IDG
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G++  A  + + M+  G  PD+VT++S++   C+   +++      +M  K + PN
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +T+  LI       +  +A R  K+++ + ++P     + ++   CK G + EA  +  
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K   PD  ++ I++ G+  KG +V+   +F+ ML  G APD  T N LI      G
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 557 MPNEAFRI 564
           M ++A  I
Sbjct: 422 MLDKAMII 429



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
            SP   TY  ++    +  + + A   + ++   G++ + +  N L++GF +      A 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILI 444
           + +  R    G +PDV ++S L+   C  G+  Q   L   M   G   SPNV  +  +I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +   KE  +N A    K++    + P    YN V+   CKA  +D+A   + +M  KR  
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           P+  T+  LI G+   G+  EA+ +F +M R    PD +T++ L+  L K G   EA
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 10/274 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN+ L+     Y+++M   C +G  +    VFD M S G  PN  +    V+   + G+ 
Sbjct: 539 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 598

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    L  +     +  ST +Y+ +++ L +      A   F E        D  T+NI+
Sbjct: 599 DEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIV 658

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++GL +     +A   F ++ +     +I+T NT+I G+ +   V    +L   +  +S 
Sbjct: 659 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS-RSR 717

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
             P+VVTY+ +I+   K G +++A  +++ M + G +P++   N ++    K   +V A 
Sbjct: 718 LVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAG 777

Query: 387 ---EYMRERMLSFGYLPDVV---TFSSLIDGYCR 414
                + ER  S  +L  ++    FSS   G CR
Sbjct: 778 AYLSKIDERNFSLEHLTAMLLVDLFSS--KGTCR 809



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 3/207 (1%)

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P++ T+ +L+D   +      A     ++L  G   +++  + L++G+C   + ++ L
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 423 K-LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV--PKPFMYNPVI 479
             L          P+V++++IL+ +LC + +   A   L+ +     V  P    YN VI
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DGF K G+V++A  +  EM ++   PD VT+  ++   C    M +A +   +M+     
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
           P++ T N+LI      G   EA R+ +
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFK 326


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 185/424 (43%), Gaps = 36/424 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN+V+ + C  G        F+ M   G  P        +++  + G    A+ L    
Sbjct: 93  AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL 152

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    + +  MYN+L+N  VK    D+A  +++E  +    PD  TFNIL+ G  + G  
Sbjct: 153 KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGRE 212

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +       D+   G  PD   ++  +SGLC    +    E L ++  +   SP ++ + S
Sbjct: 213 EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM-LEKGLSPSIIAFNS 271

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVT---------------------------- 369
           VI+ Y + G  DKA   Y  M   G+ PS  T                            
Sbjct: 272 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 331

Query: 370 -------FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                  F VL+D F K G++V A+ +   M   G  PDVV FS+ IDG  + G + +  
Sbjct: 332 LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAY 391

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            +  EM  K L PN + +  LI   CK  +LN+A +  K ++   L+P  F  N +I G 
Sbjct: 392 NVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL 451

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G +  A  +  +M +    PD +T+  LI G+C    MV A ++ N+M   G  PD 
Sbjct: 452 CKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDL 511

Query: 543 ITVN 546
            T N
Sbjct: 512 TTYN 515



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 192/420 (45%), Gaps = 36/420 (8%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N +  T+N V+ + C+ G     + +FD ++  G  PN+ M    ++  ++  + D A  
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L  + R   +      +N L++   K    ++   + K+   L   PD   F+I + GL 
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
             G + +A EF  DM   G SP I+ +N++I+   +     +  E  K +      +P  
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK-LMVHFGLTPSP 301

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T +S++ G    G++ +AT +  +M   G+  + + F VL+D F K G++V A+ +   
Sbjct: 302 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 361

Query: 393 MLSFGYLPDVVTFSSLIDG-----------------------------------YCRNGQ 417
           M   G  PDVV FS+ IDG                                   +C+ G+
Sbjct: 362 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 421

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           LN+ LKL   M+ + L P+++T  ++I  LCK+ R+  A      +    L P    YN 
Sbjct: 422 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 481

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           +I+G+CKA ++  A+ +V  M      PD  T+ I I G C   RM  A+ + ++++  G
Sbjct: 482 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 189/428 (44%), Gaps = 36/428 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T++ ++   C  G     + +   M      PN+      +++C   G+   A    +  
Sbjct: 58  TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 117

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   +N+++NA  K+ N  EA  +F     +   P+   +N L+ G  ++ E+
Sbjct: 118 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREI 177

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   + +M   G +PD +T+N L+SG  +      G  LLK++       PD   +  
Sbjct: 178 DQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG-LLPDRSLFDI 236

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +SG C  G++D+A     +M   G+ PS + FN +I  + + G    A    + M+ FG
Sbjct: 237 SVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFG 296

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS----------------------- 434
             P   T SSL+ G   NG+L +  +L  +M  K LS                       
Sbjct: 297 LTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQ 356

Query: 435 ------------PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
                       P+V  F+  I+ L K+  + +A     ++    L+P  F YN +I GF
Sbjct: 357 SLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGF 416

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK G ++EA  +   M  +   PD  T  ++I G C +GRM  AI++F  M + G +PD 
Sbjct: 417 CKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDI 476

Query: 543 ITVNSLIS 550
           IT N+LI+
Sbjct: 477 ITYNTLIN 484



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 159/311 (51%), Gaps = 1/311 (0%)

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           + + +P+ + +NI+I      G    A  +F  M   GC+P +VT+NT+I+  C+   V 
Sbjct: 84  KFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVV 143

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              +L   +K +  FSP+ + Y ++++GY K+ ++D+A  +Y EM   GI P  +TFN+L
Sbjct: 144 EARKLFDGLK-EMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNIL 202

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           + G  K G     + + + +   G LPD   F   + G C  G+L++ ++   +M  K L
Sbjct: 203 VSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGL 262

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           SP++  F  +I A  +    + A    K +    L P P   + ++ G    G + EA  
Sbjct: 263 SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATE 322

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ +M EK    + + FT+L+     +G +V A S++ +M R G  PD +  ++ I  L 
Sbjct: 323 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 382

Query: 554 KGGMPNEAFRI 564
           K G+  EA+ +
Sbjct: 383 KQGLVEEAYNV 393



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 1/404 (0%)

Query: 161 LVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPG 220
           ++ + L  +G + +V  +F  +   G  P        +    R G     + LL      
Sbjct: 26  ILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKF 85

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
               + F YN ++NA   +    +A+  F         P   TFN +I    + G V +A
Sbjct: 86  HCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEA 145

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
            + F  +   G SP+ + YNTL++G  ++ E+ + + L +E++ K   +PD +T+  ++S
Sbjct: 146 RKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR-KKGIAPDGITFNILVS 204

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
           G+ K G+ +    +  +++  G+ P    F++ + G    G +  A      ML  G  P
Sbjct: 205 GHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSP 264

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
            ++ F+S+I  Y + G  ++  +    M    L+P+  T + L+  L    RL +A   +
Sbjct: 265 SIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELI 324

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
            Q+    L      +  ++D F K G+V  A  +  EME +   PD V F+  I G   +
Sbjct: 325 GQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQ 384

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G + EA ++F +MLR G  P++   NSLI    K G  NEA ++
Sbjct: 385 GLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 428



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 154/314 (49%), Gaps = 3/314 (0%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +P      IL + L R+G+    ++ F D+   G  P   T++ +I G CR   +  G  
Sbjct: 18  RPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGES 77

Query: 318 LLKEV-KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           LL  + KF  E  P+   Y  VI+  C  G+   A   +N M   G  P+ VTFN +I+ 
Sbjct: 78  LLHLMPKFHCE--PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINA 135

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K GN+V A  + + +   G+ P+ + +++L++GY +  +++Q   L +EM+ K ++P+
Sbjct: 136 FCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPD 195

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
             TF IL++   K  R  D  R LK +    L+P   +++  + G C AG +DEA   + 
Sbjct: 196 GITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLM 255

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +M EK   P  + F  +I  +   G   +A   +  M+  G  P   T +SL+  L   G
Sbjct: 256 DMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSING 315

Query: 557 MPNEAFRIMQRASE 570
              EA  ++ +  E
Sbjct: 316 RLQEATELIGQMIE 329



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 145/291 (49%), Gaps = 5/291 (1%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
            L+ S   +N V+ +  + GL D     +  M   G  P+       +      G+   A
Sbjct: 261 GLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEA 320

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L+ Q     ++++   +  LL+   K+ +   A  ++ E  R    PD   F+  I G
Sbjct: 321 TELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDG 380

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           LS+ G V++A+  F +M   G  P+   YN+LI G C+  ++    +L K ++ +    P
Sbjct: 381 LSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRG-LLP 439

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D+ T   +I G CK G+M  A  ++ +M+  G+ P  +T+N LI+G+ K  +MV+A+ + 
Sbjct: 440 DIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLV 499

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            RM + G  PD+ T++  I G+C + ++N+ + + DE+    +S  + +F+
Sbjct: 500 NRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL----VSAGILSFS 546



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 36/362 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++    + G  +    +   +   G LP+  + +  VS    AG+ D A   L   
Sbjct: 198 TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM 257

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEA--VYMFKEYFRLYSQPDT-------------- 261
               ++ S   +NS++ A  +    D+A   Y    +F L   P T              
Sbjct: 258 LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 317

Query: 262 -------------------WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                                F +L+    + G+V  A   + +M   G  PD+V ++  
Sbjct: 318 QEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAF 377

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I GL +   V   + +  E+  +    P+   Y S+I G+CK GK+++A  +   M   G
Sbjct: 378 IDGLSKQGLVEEAYNVFLEM-LRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRG 436

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P   T N++I G  K G M SA  +   M   G  PD++T+++LI+GYC+   +    
Sbjct: 437 LLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNAD 496

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L + M     +P++ T+ I I+  C   R+N A   L +L    ++   F   P ++  
Sbjct: 497 NLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFSFACPPTLNAH 556

Query: 483 CK 484
            K
Sbjct: 557 TK 558



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 107/220 (48%)

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  I   M   G++PSA    +L     +VG+  +   + + ++  G  P   TFS +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            G+CR G ++ G  L   M   +  PN + + I+INA C   R +DA  +   +      
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    +N VI+ FCK GNV EA  +   ++E    P+ + +  L+ G+     + +A  +
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           + +M + G APD IT N L+S   K G   +  R+++  S
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 223



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 71/151 (47%)

Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
           Q L++   M+   + P+     IL   L +     +  +  K +      P  + ++ +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
            GFC+ G +     ++  M +  C+P+   + I+I   C++GR  +A++ FN M+  GC 
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           P  +T N++I+   K G   EA ++     E
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKE 154


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 204/415 (49%), Gaps = 25/415 (6%)

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC----DA 209
           H  +T+ L++  L  +      + + + M+ +  +      + F+S C   G+     DA
Sbjct: 48  HDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTE---DIFLSICRGYGRVHRPLDA 104

Query: 210 AKGLLS----QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
            +        Q RP +       Y ++L+ LV++N+   A+  ++E   L       + N
Sbjct: 105 IRVFHKMEGFQLRPTQKA-----YLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLN 159

Query: 266 ILIQGLSRIGE-VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
           ILI+ L +  E V  A   F +M + GC PD  TY TLI+GLCR+  ++   EL KE++ 
Sbjct: 160 ILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQ 219

Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
           K  FS  VVTYTS+I G C+   +D+A G+  EM    I+P+  T++ L+DG  K G+  
Sbjct: 220 KG-FSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSS 278

Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
            A  + E M    +LP++VT+S+LI+G C+  +L + +++ D M+ + L PN   +  +I
Sbjct: 279 QAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKII 338

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPF-------MYNPVIDGFCKAGNVDEANVIVAE 497
           + LC      +A  F+ ++    + P          M+N V+ G C   +   A  +   
Sbjct: 339 SGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLS 398

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           M  +    +  TF  L+   C +G + +A  I  +M+  GC PD+   N +I  L
Sbjct: 399 MRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGL 453



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 186/385 (48%), Gaps = 11/385 (2%)

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             +S  +   +   A+G+L + +  +  ++  ++ S+     + +   +A+ +F +    
Sbjct: 55  LIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGF 114

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE-VAR 314
             +P    +  ++  L     VK+A  F+ +M   G    +V+ N LI  LC+  E V  
Sbjct: 115 QLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDS 174

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              + +E+  +    PD  TY ++I+G C+LG + +A  ++ EM   G   S VT+  LI
Sbjct: 175 ALRIFQEMPNRG-CQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLI 233

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G  +  N+  A  + E M      P+V T+SSL+DG C+ G  +Q ++L + M  K+  
Sbjct: 234 HGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHL 293

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PN+ T++ LIN LCKE +L +A   L +++   L P   +Y  +I G C AG+  EA   
Sbjct: 294 PNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANF 353

Query: 495 VAEMEEKRCKPDKVTFTI-------LIIGHCMKGRMVEAISIFNKMLRIGCAPDDI-TVN 546
           + EM      P++ ++++       ++ G C       A  ++  M R  C   +I T +
Sbjct: 354 IDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSM-RTRCISVEIDTFD 412

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
            L+ C  K G  ++A RI++    D
Sbjct: 413 CLVKCFCKRGDLHKAARILEEMVLD 437



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 151/336 (44%), Gaps = 45/336 (13%)

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVK-QNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
           A G   + R   +  S    N L+ AL K +   D A+ +F+E      QPD++T+  LI
Sbjct: 139 AIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLI 198

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
            GL R+G + +A E F +M   G S  +VTY +LI GLC+ N +     LL+E+K +++ 
Sbjct: 199 NGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMK-RNDI 257

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            P+V TY+S++ G CK G   +A  +   M+     P+ VT++ LI+G  K   +  A  
Sbjct: 258 EPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVE 317

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN------------ 436
           + +RM   G  P+   +  +I G C  G   +     DEM    +SPN            
Sbjct: 318 ILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHN 377

Query: 437 ------------------------------VYTFTILINALCKENRLNDARRFLKQLKWN 466
                                         + TF  L+   CK   L+ A R L+++  +
Sbjct: 378 MVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLD 437

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEAN-VIVAEMEEK 501
             +P   ++N VI G      V EA   ++ E+++K
Sbjct: 438 GCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQK 473



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 152/318 (47%), Gaps = 7/318 (2%)

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF---GCSPDIVTYNTLISGLCRVNE 311
           L+  P   T ++++Q +    +V KA   F    +    G   D  T+  +IS L  VN+
Sbjct: 6   LFKWPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQ 65

Query: 312 VARGHELLKEVKF-KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF 370
                 +L+ +K  K   + D+  + S+  GY ++ +   A  ++++M    ++P+   +
Sbjct: 66  FRPAEGMLERMKQEKCMVTEDI--FLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAY 123

Query: 371 NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ-LNQGLKLCDEMK 429
             ++D   +  ++  A      M   G    VV+ + LI   C+N + ++  L++  EM 
Sbjct: 124 LTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMP 183

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
            +   P+ YT+  LIN LC+   +++A+   K+++          Y  +I G C++ N+D
Sbjct: 184 NRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLD 243

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           EA  ++ EM+    +P+  T++ L+ G C  G   +A+ +   M +    P+ +T ++LI
Sbjct: 244 EAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLI 303

Query: 550 SCLLKGGMPNEAFRIMQR 567
           + L K     EA  I+ R
Sbjct: 304 NGLCKERKLREAVEILDR 321



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 1/253 (0%)

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
           ++ + F  D  T+  +IS    + +   A G+   M       +   F  +  G+G+V  
Sbjct: 41  EYGNGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHR 100

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
            + A  +  +M  F   P    + +++D       + + +    EM+   +  +V +  I
Sbjct: 101 PLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNI 160

Query: 443 LINALCK-ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           LI ALCK +  ++ A R  +++      P  + Y  +I+G C+ GN+ EA  +  EME+K
Sbjct: 161 LIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQK 220

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
                 VT+T LI G C    + EAI +  +M R    P+  T +SL+  L KGG  ++A
Sbjct: 221 GFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQA 280

Query: 562 FRIMQRASEDQNL 574
            ++++   +  +L
Sbjct: 281 MQLLEVMDKKHHL 293


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 198/409 (48%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++      G  +  + VF++M     +P+       +    R  + D A  +LS+ 
Sbjct: 261 TYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEM 320

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  S   Y++LLN   K +    A+ +  +        +     ILI G  ++GE+
Sbjct: 321 EITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEI 380

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA +    M   G  PD+VTY+ LI+G+CR+ ++    E+L  ++ KS   P+ V YT+
Sbjct: 381 SKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQ-KSGILPNDVLYTT 439

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YCK G +  A   + ++   G+  + V  N L+  F + G +  AE+ R+ M    
Sbjct: 440 LICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMN 499

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + V+F+ +ID YC  G++ +   + D+M     SPNV T+  L+  LC+   L  A+
Sbjct: 500 ISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAK 559

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +F+  L           +N ++ G CK G +DEA  I  +M +  C PD  T+TIL+ G 
Sbjct: 560 QFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGF 619

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           C KG+++ A+ +   ML  G  PD +    L++ L+  G    A  + Q
Sbjct: 620 CRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQ 668



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 200/408 (49%), Gaps = 2/408 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++ SLC  G     + +   M+S   L NS      +   ++ G+  AA  +L   
Sbjct: 157 TCNILLNSLCTNGEFRKAEDMLQKMKS-CCLSNSATYNTILHWYVKKGRFKAALCVLEDM 215

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + YN +++ L +   +  A  + K   +    PD  T+N LI G    G++
Sbjct: 216 ERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKI 275

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A   F  M      P + TY T+I G CR   + +   +L E++  +   P  +TY++
Sbjct: 276 NHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEI-TGVMPSELTYSA 334

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++GYCK+  +  A  +  ++ S GI  +     +LIDGF +VG +  A+ + + ML  G
Sbjct: 335 LLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDG 394

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVT+S+LI+G CR  ++++  ++   M+   + PN   +T LI   CK   +  A 
Sbjct: 395 IDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVAL 454

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    +    LV  P ++N ++  F + G + EA      M       + V+F  +I  +
Sbjct: 455 KHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSY 514

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           C +G++VEA S+++ M+R G +P+  T  +L+  L +GG   +A + M
Sbjct: 515 CHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 562



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 200/457 (43%), Gaps = 41/457 (8%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
            SR+N+S N    ++N ++ S C  G       V+D M   GH PN    +  +    + 
Sbjct: 495 MSRMNISFNSV--SFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQG 552

Query: 205 GKCDAAKGLLSQFR--PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           G    AK  +      P  V   TF  N+LL  + K    DEA+ + ++  +    PD  
Sbjct: 553 GHLVQAKQFMFCLLDIPSAVDEKTF--NALLLGICKYGTLDEALDICEKMVKNNCLPDIH 610

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+ IL+ G  R G++  A      M   G  PD V Y  L++GL    +V     + +E+
Sbjct: 611 TYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEI 670

Query: 323 KFKSEFSPDVVTYTSVIS-----------------------------------GYCKLGK 347
             K     D + Y S+++                                   GY K G+
Sbjct: 671 ICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQ 730

Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
             K+  +Y  M   GI+P  VT+ +LI G  + G +  A    E+M+  G  PD + F  
Sbjct: 731 FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDI 790

Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
           LI  +    +++  L+L + MK  +LSP+  TF+ +IN L ++N L+ +   L ++    
Sbjct: 791 LITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVG 850

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           L P    Y  +++  C+ G +D A  +  EM+     P +V  + +I G C  G++ EA+
Sbjct: 851 LQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAV 910

Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            +F+ M+R G  P   T  +L+  L K     +A  +
Sbjct: 911 IVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHL 947



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 169/340 (49%), Gaps = 2/340 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N LLN+L       +A  M ++  +     ++ T+N ++    + G  K A     DM  
Sbjct: 159 NILLNSLCTNGEFRKAEDMLQK-MKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMER 217

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
                DI TYN +I  LCR+   AR   LLK ++ K + +PD  TY ++I+G+   GK++
Sbjct: 218 DSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMR-KDDLTPDECTYNTLINGFFGEGKIN 276

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            A  ++N M    + PS  T+  +IDG+ +   +  A  +   M   G +P  +T+S+L+
Sbjct: 277 HARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALL 336

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +GYC+   L   L L  ++K + ++ N    TILI+  C+   ++ A++ LK +  + + 
Sbjct: 337 NGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGID 396

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    Y+ +I+G C+   + E   I++ M++    P+ V +T LI  +C  G +  A+  
Sbjct: 397 PDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKH 456

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           F  + R G   + +  N+L+    + GM  EA    Q  S
Sbjct: 457 FVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMS 496



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 161/334 (48%), Gaps = 2/334 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           NS+L ALV++  +       +E        D  T NIL+  L   GE +KA +    M S
Sbjct: 124 NSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKS 183

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
             C  +  TYNT++    +         +L++++ +     D+ TY  +I   C++ +  
Sbjct: 184 -CCLSNSATYNTILHWYVKKGRFKAALCVLEDME-RDSIQADIYTYNIMIDKLCRIKRSA 241

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  +   M    + P   T+N LI+GF   G +  A  +   ML    +P V T++++I
Sbjct: 242 RAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMI 301

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           DGYCRN ++++ L +  EM+   + P+  T++ L+N  CK + L  A   +  LK   + 
Sbjct: 302 DGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGIT 361

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
               M   +IDGFC+ G + +A  I+  M E    PD VT++ LI G C   +M E   I
Sbjct: 362 INKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEI 421

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            ++M + G  P+D+   +LI    K G    A +
Sbjct: 422 LSRMQKSGILPNDVLYTTLICYYCKAGYVKVALK 455



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 190/417 (45%), Gaps = 1/417 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++    + G   +   V + M  D    +       +    R  +   A  LL + 
Sbjct: 191 TYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRM 250

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R  ++T     YN+L+N    +   + A  +F    R    P   T+  +I G  R   +
Sbjct: 251 RKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRI 310

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA     +M   G  P  +TY+ L++G C+V+ +    +L+ ++K +   + +    T 
Sbjct: 311 DKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRG-ITINKTMCTI 369

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+C++G++ KA  I   M   GI P  VT++ LI+G  ++  M   + +  RM   G
Sbjct: 370 LIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSG 429

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LP+ V +++LI  YC+ G +   LK   ++  + L  N      L+ A  +E  + +A 
Sbjct: 430 ILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAE 489

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
            F + +   ++      +N +ID +C  G + EA  +  +M      P+  T+  L+ G 
Sbjct: 490 HFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGL 549

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
           C  G +V+A      +L I  A D+ T N+L+  + K G  +EA  I ++  ++  L
Sbjct: 550 CQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCL 606



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 197/425 (46%), Gaps = 4/425 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TY +++   C  G      V+   M   G +P++      ++  I  G+  AA  +  + 
Sbjct: 611  TYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEI 670

Query: 218  RPGE-VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               E +      YNSL+N  +K  N +    M  + ++    P++ ++NIL+ G  + G+
Sbjct: 671  ICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQ 730

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              K+   +  M   G  PD VTY  LI GL     +    + L+++  +  F PD + + 
Sbjct: 731  FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIF-PDKLVFD 789

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
             +I+ + +  KM  A  ++N M    + PS+ TF+ +I+G  +   +  +  +   ML  
Sbjct: 790  ILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQV 849

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            G  P+   + +L++  CR G++++  +L +EMK   + P     + +I  LC+  +L +A
Sbjct: 850  GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 909

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                  +  + +VP    +  ++   CK   + +A  +   ME  R K D V++ +LI G
Sbjct: 910  VIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITG 969

Query: 517  HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
             C    + +A+ ++ +M   G  P+  T  +L   +   G       +++   E++ L +
Sbjct: 970  LCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDI-EERGL-I 1027

Query: 577  PSWKK 581
            P++K+
Sbjct: 1028 PAFKQ 1032



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 182/409 (44%), Gaps = 6/409 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           KT+N ++  +C+ G  D    + + M  +  LP+       +S   R GK   A  +L  
Sbjct: 575 KTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQM 634

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYF---RLYSQPDTWTFNILIQGLSR 273
                V   T  Y  LLN L+ +     A Y+F+E      LY+  D   +N L+ G  +
Sbjct: 635 MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYA--DCIAYNSLMNGYLK 692

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G V        DM      P+  +YN L+ G  +  + ++   L K +  K    PD V
Sbjct: 693 GGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG-IRPDNV 751

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY  +I G  + G +D A     +M   GI P  + F++LI  F +   M +A  +   M
Sbjct: 752 TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCM 811

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                 P   TFS++I+G  R   L+Q  ++  EM    L PN   +  L+NA C+   +
Sbjct: 812 KCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEI 871

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + A R  +++K   +VP     + +I G C+ G ++EA ++ + M      P   TFT L
Sbjct: 872 DRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTL 931

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           +   C + ++ +A+ +   M       D ++ N LI+ L K    ++A 
Sbjct: 932 MHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDAL 980



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/446 (21%), Positives = 199/446 (44%), Gaps = 37/446 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ ++   C++ +      +   ++S G   N  M    +    + G+   AK +L   
Sbjct: 331 TYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSM 390

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y++L+N + +     E   +     +    P+   +  LI    + G V
Sbjct: 391 LEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYV 450

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K A + F D+   G   + V +N L+    R   +    E  ++   +   S + V++  
Sbjct: 451 KVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEA-EHFRQYMSRMNISFNSVSFNC 509

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YC  GK+ +A  +Y++M   G  P+  T+  L+ G  + G++V A+     +L   
Sbjct: 510 IIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIP 569

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D  TF++L+ G C+ G L++ L +C++M   N  P+++T+TIL++  C++ ++  A 
Sbjct: 570 SAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPAL 629

Query: 458 RFLKQLKWNDLVPKP------------------------------------FMYNPVIDG 481
             L+ +    +VP                                        YN +++G
Sbjct: 630 VMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNG 689

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           + K GNV+    ++++M +    P+  ++ IL+ G+  +G+  +++ ++  M+R G  PD
Sbjct: 690 YLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPD 749

Query: 542 DITVNSLISCLLKGGMPNEAFRIMQR 567
           ++T   LI  L + G+ + A + +++
Sbjct: 750 NVTYRLLILGLSECGLIDIAVKFLEK 775



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 155/360 (43%), Gaps = 44/360 (12%)

Query: 248 MFKEYFRLYSQPDTW---TFNILIQGLSRIGEVKKAFE--FFYDMGSFGCSPDIVTYNTL 302
           +F    R+ S+ D+     F +LI+   +  +V  A    FF D   F  SP  V  N++
Sbjct: 69  IFTSLLRIISRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASP--VACNSI 126

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           +  L    E       L+E     +F  DV T   +++  C  G+  KA  +  +M SC 
Sbjct: 127 LKALVEEGESKYVWLFLRE-SLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCC 185

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  SA T+N ++  + K G   +A  + E M       D+ T++ +ID  CR  +  +  
Sbjct: 186 LSNSA-TYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAF 244

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            L   M+  +L+P+  T+  LIN    E ++N AR     +    LVP    Y  +IDG+
Sbjct: 245 LLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGY 304

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTF-------------------------------- 510
           C+   +D+A  +++EME     P ++T+                                
Sbjct: 305 CRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINK 364

Query: 511 ---TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              TILI G C  G + +A  I   ML  G  PD +T ++LI+ + +    +E   I+ R
Sbjct: 365 TMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSR 424



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 1/217 (0%)

Query: 150  LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
            L L+ S KT++ ++  L      D    V   M   G  PN       V++  R G+ D 
Sbjct: 814  LHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDR 873

Query: 210  AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            A  L  + +   +  +    +S++  L +    +EAV +F    R    P   TF  L+ 
Sbjct: 874  AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMH 933

Query: 270  GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
             L +  ++  A      M       D+V+YN LI+GLC+   ++   +L  E+K K  + 
Sbjct: 934  SLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLW- 992

Query: 330  PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
            P+V TY ++       G+M     +  ++   G+ P+
Sbjct: 993  PNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPA 1029


>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1429

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 196/394 (49%), Gaps = 5/394 (1%)

Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
           L V+ + +   L ++   F R   +++++ + YN +M      G  + VQ + D MR  G
Sbjct: 183 LAVLGKANQEALAVEI--FIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERG 240

Query: 187 HLPNSPMIEFFVSSCIRAGKC--DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADE 244
             P+       +++ ++AG    + A  LL++ R   +      YN+L++A  +++N +E
Sbjct: 241 CEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEE 300

Query: 245 AVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           AV +F +    Y QPD WT+N +I    R G   KA + F ++ S G  PD VTYN+L+ 
Sbjct: 301 AVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLY 360

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
              R   V +  E+  E+  +  F  D +TY ++I  Y K G+   A  +Y +M   G  
Sbjct: 361 AFAREGNVDKVKEICNEM-VQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRT 419

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P A+T+ VLID  GK   MV A  +   ML+ G  P + T+S+LI GY R GQ  +  + 
Sbjct: 420 PDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEET 479

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            D M+   + P+   ++++++   + +    A    +++  + + P P +Y  ++    +
Sbjct: 480 FDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGR 539

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              V++   I+ +MEE      +   +IL+ G C
Sbjct: 540 ENKVEDIQRIIRDMEEVCGMNPQAIASILVKGEC 573



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 164/331 (49%), Gaps = 8/331 (2%)

Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD--TWTFNILIQGLSRIGEVKKAFEFFY 285
           M  ++L  L K N    AV +F    R  S  D     +N ++   +R G   K      
Sbjct: 178 MLATILAVLGKANQEALAVEIF---IRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLD 234

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVAR--GHELLKEVKFKSEFSPDVVTYTSVISGYC 343
            M   GC PD+V++NTLI+   +   +      ELL EV+ +S   PD++TY ++IS   
Sbjct: 235 LMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVR-RSGLRPDIITYNTLISACS 293

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           +   +++A  ++++M +   +P   T+N +I  +G+ G    AE + + + S GY PD V
Sbjct: 294 RESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAV 353

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T++SL+  + R G +++  ++C+EM       +  T+  +I+   K+ +   A +  + +
Sbjct: 354 TYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDM 413

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           K +   P    Y  +ID   KA  + EA  +++EM     KP   T++ LI G+   G+ 
Sbjct: 414 KLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQR 473

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           +EA   F+ M R G  PD +  + ++   L+
Sbjct: 474 LEAEETFDCMRRSGIRPDQLAYSVMLDVFLR 504



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 193/398 (48%), Gaps = 9/398 (2%)

Query: 178 VFDYMR-SDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM--STFMYNSLLN 234
           VF+++     + PN+ M+   ++     GK +     +  F   E T+  +  +YN+++ 
Sbjct: 162 VFEWLNLRHWYSPNARMLATILAVL---GKANQEALAVEIFIRAESTVDNTVQVYNAMMG 218

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK--AFEFFYDMGSFGC 292
              +    ++   M         +PD  +FN LI    + G +    A E   ++   G 
Sbjct: 219 VYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGL 278

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PDI+TYNTLIS   R + +    ++  +++      PD+ TY ++IS Y + G   KA 
Sbjct: 279 RPDIITYNTLISACSRESNLEEAVKVFDDME-AHYCQPDLWTYNAMISVYGRCGFSGKAE 337

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ E+ S G  P AVT+N L+  F + GN+   + +   M+  G++ D +T++++I  Y
Sbjct: 338 QLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMY 397

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
            + GQ    L+L  +MK    +P+  T+T+LI++L K N++ +A   + ++    + P  
Sbjct: 398 GKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTL 457

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             Y+ +I G+ +AG   EA      M     +PD++ +++++          +A+ ++ +
Sbjct: 458 RTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYRE 517

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           M+R G  PD     +++  L +     +  RI++   E
Sbjct: 518 MVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEE 555



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/377 (21%), Positives = 165/377 (43%), Gaps = 1/377 (0%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            K +N ++++    G ++  + VF+ M  DG  P    I   + + I  G+ +    +  +
Sbjct: 771  KVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQE 830

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
             +     +S      +L+A  + +N  EA  +++        P    + I+I  L +   
Sbjct: 831  IQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKR 890

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            V+       +M   G  PD+  +N+++     +++  +  ++ + +K +    PD  TY 
Sbjct: 891  VRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIK-EDGLQPDEDTYN 949

Query: 337  SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++I  YC+  + ++   + +EM   G++P   T+  LI  FGK   +V AE + E +LS 
Sbjct: 950  TLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSK 1009

Query: 397  GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
            G   D   +  ++  Y  +G  ++  KL   MK   + P + T  +L+ +     +  +A
Sbjct: 1010 GSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEA 1069

Query: 457  RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             + L  LK   L      Y+ VID + K  +       + EM+++  +PD   +T  I  
Sbjct: 1070 EKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRA 1129

Query: 517  HCMKGRMVEAISIFNKM 533
              +     +AI +   +
Sbjct: 1130 ASLSEHTHDAILLLQAL 1146



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 122/287 (42%), Gaps = 1/287 (0%)

Query: 178  VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
            ++  M++ G+ P   +    +    +  +    + ++++           ++NS+L    
Sbjct: 862  IYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYT 921

Query: 238  KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
              ++  + V +++       QPD  T+N LI    R    ++     ++M   G  P + 
Sbjct: 922  GIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLD 981

Query: 298  TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
            TY +LI+   +   V    EL +E+  K     D   Y  ++  Y   G   KA  + + 
Sbjct: 982  TYKSLIAAFGKQQLVVDAEELFEELLSKGS-KLDRSFYHIMMKIYRNSGNHSKAEKLLSM 1040

Query: 358  MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
            M   G++P+  T ++L+  +G  G    AE +   +   G     + +SS+ID Y +N  
Sbjct: 1041 MKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKD 1100

Query: 418  LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
             + G++   EMK + L P+   +T  I A       +DA   L+ L+
Sbjct: 1101 YSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQALQ 1147



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 138/314 (43%), Gaps = 7/314 (2%)

Query: 260  DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGH 316
            D   +N LIQ  +  G  ++A   F  M   G SP + + N L+  L    R+ E+    
Sbjct: 769  DRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVT 828

Query: 317  ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            + ++++ F+   S  ++    ++  + ++  + +A  IY  M + G  P+   + ++I  
Sbjct: 829  QEIQDMGFQISKSSILL----ILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGL 884

Query: 377  FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
              K   +   E M   M   G+ PD+  ++S++  Y       + +++   +K   L P+
Sbjct: 885  LCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPD 944

Query: 437  VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
              T+  LI   C+++R  +    + +++   L PK   Y  +I  F K   V +A  +  
Sbjct: 945  EDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFE 1004

Query: 497  EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            E+  K  K D+  + I++  +   G   +A  + + M   G  P   T++ L+      G
Sbjct: 1005 ELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSG 1064

Query: 557  MPNEAFRIMQRASE 570
             P EA +++    E
Sbjct: 1065 QPQEAEKVLTNLKE 1078



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/488 (20%), Positives = 192/488 (39%), Gaps = 72/488 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +    G  D V+ + + M   G + +       +    + G+   A  L    
Sbjct: 354 TYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDM 413

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    T     Y  L+++L K N   EA  +  E   +  +P   T++ LI G +R G+ 
Sbjct: 414 KLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQR 473

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F  M   G  PD + Y+ ++    R +E  +   L +E+  +   +PD   Y +
Sbjct: 474 LEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREM-VRDGITPDPTVYGA 532

Query: 338 VISGYCKLGKMDKATGIYNEMNS-CGIKPSAVTFNVLIDG--FGKVGNMV------SAEY 388
           ++    +  K++    I  +M   CG+ P A+  ++L+ G  +     M+      S E 
Sbjct: 533 MLRNLGRENKVEDIQRIIRDMEEVCGMNPQAIA-SILVKGECYEDAAGMLRLAISGSDEI 591

Query: 389 MRERMLSF-------GYLPDVVTFSSLIDGY----------------CRNGQLNQGLKLC 425
             E +LS        G   + +     + G+                C+  QL+  LK  
Sbjct: 592 DSENLLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQLDAALKEY 651

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLN-DARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
           ++ +  +      T    +   C+EN    +A +    +++N + P   +Y  ++  +CK
Sbjct: 652 NDTREFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCK 711

Query: 485 AGNVDEANVIV--AEME---------------------------------EKRC-KPDKV 508
            G  + A+ ++  AE+E                                  +RC   D+ 
Sbjct: 712 MGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVDRK 771

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
            +  LI  +   G   +A ++FN M+R G +P   ++N L+  L+  G   E + + Q  
Sbjct: 772 VWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEI 831

Query: 569 SEDQNLQL 576
            +D   Q+
Sbjct: 832 -QDMGFQI 838


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 202/421 (47%), Gaps = 5/421 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TY +++ ++C+         V D MR+ G  PN       ++   R G+ D AK +L
Sbjct: 186 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 245

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           ++            Y ++L  L      D+   +F E       P+  TF++L++   R 
Sbjct: 246 NRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRG 305

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V++A +    M   GC+P+    N +I+ +C+   V   ++ L  +      +PD ++
Sbjct: 306 GMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG-CNPDTIS 364

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT+V+ G C+ G+ + A  +  EM      P+ VTFN  I    + G +  A  + E M 
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            +G    +VT+++L+ G+C  G+++  L+L + +  +   PN  T+T L+  LC   RL+
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLD 481

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L ++   D       +N ++  FC+ G V+EA  +V +M E  C P+ +TF  L+
Sbjct: 482 AAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 541

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G        EA+ + + ++  G + D IT +S++  L +     EA +++  A +D  +
Sbjct: 542 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH-AVQDMGM 600

Query: 575 Q 575
           +
Sbjct: 601 R 601



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 186/380 (48%), Gaps = 4/380 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+++++R  C  G+ +    V   M   G  PN+ +    +++  + G+ D A   L+  
Sbjct: 294 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 353

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                   T  Y ++L  L +    + A  +  E  R    P+  TFN  I  L + G +
Sbjct: 354 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLI 413

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A +    M  +GCS  IVTYN L+ G C    V    EL   +  +    P+ +TYT+
Sbjct: 414 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE----PNTITYTT 469

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C   ++D A  +  EM       +AVTFNVL+  F + G +  A  +  +M+  G
Sbjct: 470 LLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 529

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+++TF++L+DG  ++    + L+L   +  K +S +  T++ +++ L +E+R  +A 
Sbjct: 530 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 589

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L  ++   + PK  MYN ++   CK    D+A    A M    C P++ T+ ILI G 
Sbjct: 590 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649

Query: 518 CMKGRMVEAISIFNKMLRIG 537
             +G + EA  + +++   G
Sbjct: 650 AHEGLLKEARYVLSELYAKG 669



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 1/274 (0%)

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           GC P +VTY  L+  +C+ +       +L E++ K   +P++VTY  +I+G C+ G++D 
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-CTPNIVTYNVIINGMCREGRVDD 240

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A  I N ++S G +P  V++  ++ G          + +   M+    +P+ VTF  L+ 
Sbjct: 241 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 300

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
            +CR G + + +++  +M     +PN     I+INA+CK+ R++DA  FL  +      P
Sbjct: 301 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 360

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y  V+ G C+AG  + A  ++ EM  K C P++VTF   I   C KG + +AI + 
Sbjct: 361 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 420

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             M   GC+   +T N+L+      G  + A  +
Sbjct: 421 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALEL 454



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 195/409 (47%), Gaps = 6/409 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  V++ LC     D V+V+F  M     +PN    +  V    R G  + A  +L Q 
Sbjct: 259 SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 318

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGE 276
                T +T + N ++NA+ KQ   D+A Y F     +Y   PDT ++  +++GL R G 
Sbjct: 319 SQHGCTPNTTLCNIVINAICKQGRVDDA-YDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 377

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            + A E   +M    C P+ VT+NT I  LC+   + +  +L+ E+  +   S  +VTY 
Sbjct: 378 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI-ELMPEYGCSVGIVTYN 436

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G+C  G++D A  ++N +     +P+ +T+  L+ G      + +A  +   M+  
Sbjct: 437 ALVHGFCVQGRVDSALELFNNLPC---EPNTITYTTLLTGLCHAERLDAAAELLAEMIQK 493

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
               + VTF+ L+  +C+ G + + ++L ++M     +PN+ TF  L++ + K+    +A
Sbjct: 494 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 553

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L  L    +      Y+ V+D   +    +EA  ++  +++   +P    +  ++  
Sbjct: 554 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 613

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            C +    +AI  F  M+  GC P++ T   LI  L   G+  EA  ++
Sbjct: 614 LCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVL 662



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 168/376 (44%), Gaps = 68/376 (18%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           QP   T+ +L++ + +     +A     +M + GC+P+IVTYN +I+G+CR   V    E
Sbjct: 184 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 243

Query: 318 LLKEVKFKSEFSPDVVTYTSVISG-----------------------------------Y 342
           +L  +     F PD+V+YT+V+ G                                   +
Sbjct: 244 ILNRLSSYG-FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 302

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
           C+ G +++A  +  +M+  G  P+    N++I+   K G +  A      M  +G  PD 
Sbjct: 303 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDT 362

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           +++++++ G CR G+     +L  EM  KN  PN  TF   I  LC++  +  A + ++ 
Sbjct: 363 ISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIEL 422

Query: 463 L----------KWNDLV----------------------PKPFMYNPVIDGFCKAGNVDE 490
           +           +N LV                      P    Y  ++ G C A  +D 
Sbjct: 423 MPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDA 482

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           A  ++AEM +K C  + VTF +L+   C KG + EA+ + N+M+  GC P+ IT N+L+ 
Sbjct: 483 AAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLD 542

Query: 551 CLLKGGMPNEAFRIMQ 566
            + K     EA  ++ 
Sbjct: 543 GITKDCNSEEALELLH 558



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 195/425 (45%), Gaps = 21/425 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+++  +C  G  D  + + + + S G  P+       +     A + D  K L ++ 
Sbjct: 224 TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM 283

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   ++ L+    +    + A+ + ++  +    P+T   NI+I  + + G V
Sbjct: 284 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRV 343

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A++F  +MG +GC+PD ++Y T++ GLCR        ELL E+  +    P+ VT+ +
Sbjct: 344 DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM-VRKNCPPNEVTFNT 402

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I   C+ G +++A  +   M   G     VT+N L+ GF   G + SA    E   +  
Sbjct: 403 FICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLP 459

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ +T+++L+ G C   +L+   +L  EM  K+   N  TF +L++  C++  + +A 
Sbjct: 460 CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAM 519

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + Q+  +   P    +N ++DG  K  N +EA  ++  +  K    D +T++ ++   
Sbjct: 520 ELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 579

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK-----------------GGMPNE 560
             + R  EAI + + +  +G  P     N ++  L K                 G MPNE
Sbjct: 580 SREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNE 639

Query: 561 AFRIM 565
           +  I+
Sbjct: 640 STYII 644



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 130/241 (53%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P VVTYT ++   CK     +A  + +EM + G  P+ VT+NV+I+G  + G +  A+ +
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             R+ S+G+ PD+V++++++ G C   + +    L  EM  K   PN  TF +L+   C+
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              +  A + L+Q+  +   P   + N VI+  CK G VD+A   +  M    C PD ++
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           +T ++ G C  GR   A  +  +M+R  C P+++T N+ I  L + G+  +A ++++   
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424

Query: 570 E 570
           E
Sbjct: 425 E 425



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 97/170 (57%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           ML  G  P VVT++ L++  C++    + + + DEM+ K  +PN+ T+ ++IN +C+E R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++DA+  L +L      P    Y  V+ G C A   D+  V+ AEM +K+C P++VTF +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           L+   C  G +  AI +  +M + GC P+    N +I+ + K G  ++A+
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 347



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 79/146 (54%)

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
           C  M  +   P+V T+T+L+ A+CK +   +A   L +++     P    YN +I+G C+
Sbjct: 175 CSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 234

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G VD+A  I+  +     +PD V++T ++ G C   R  +   +F +M+   C P+++T
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 545 VNSLISCLLKGGMPNEAFRIMQRASE 570
            + L+    +GGM   A +++Q+ S+
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQ 320


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 180/339 (53%), Gaps = 1/339 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N ++ AL +  N D+AV +F+         D +T++ L+ GL   G + +A     +M 
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 237

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P+ V +N LIS LC+  +++R  +L+  +  K    P+ VTY S++ G C  GK+
Sbjct: 238 VEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKG-CVPNEVTYNSLVHGLCLKGKL 296

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           DKA  + N M +    P+ +TF  L+DGF K G  +    +   +   GY  +  ++SSL
Sbjct: 297 DKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSL 356

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G  + G+   G++L  EM  K   PN   ++ LI+ LC+E + ++A+ +L ++K    
Sbjct: 357 ISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 416

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P  F Y+ ++ G+ +AG++ +A ++  EM +  C   +V ++ILI G C  G++ EA+ 
Sbjct: 417 TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALI 476

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++ +ML  G   D +  +S+I       +  +  ++  +
Sbjct: 477 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQ 515



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 194/398 (48%), Gaps = 5/398 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++NLV+++LC +G  D    VF  M     + +       +      G+ D A  LL + 
Sbjct: 177 SFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM 236

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +      +   +N L++AL K+ +   A  +    F     P+  T+N L+ GL   G++
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKL 296

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA      M +  C P+ +T+ TL+ G  +      G  +L  ++ K  +  +  +Y+S
Sbjct: 297 DKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG-YRGNEFSYSS 355

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSF 396
           +ISG  K GK +    ++ EM   G KP+ + ++ LIDG  + G    A EY+ E M + 
Sbjct: 356 LISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIE-MKNK 414

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+ P+  T+SSL+ GY   G +++ + +  EM   + + +   ++ILIN LCK  +L +A
Sbjct: 415 GHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEA 474

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--EEKRCKPDKVTFTILI 514
               KQ+    +      Y+ +I GFC A  V++   +  +M     + +PD VT+ IL+
Sbjct: 475 LIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILL 534

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
              C K  +  AI I N ML  GC PD IT +  +  L
Sbjct: 535 NAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 180/343 (52%), Gaps = 5/343 (1%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYS----QPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +N++LN ++++   D A+  +       S    QP+  +FN++I+ L R+G V +A E F
Sbjct: 139 FNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVF 198

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M    C  D  TY+TL+ GLC    +     LL E++ +  F P+ V +  +IS  CK
Sbjct: 199 RGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTF-PNPVAFNVLISALCK 257

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G + +A+ + + M   G  P+ VT+N L+ G    G +  A  +  RM++   +P+ +T
Sbjct: 258 KGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDIT 317

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           F +L+DG+ ++G+   G+++   ++ K    N ++++ LI+ L KE +     +  K++ 
Sbjct: 318 FGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMV 377

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
                P   +Y+ +IDG C+ G  DEA   + EM+ K   P+  T++ L+ G+   G + 
Sbjct: 378 EKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIH 437

Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +AI ++ +M    C   ++  + LI+ L K G   EA  + ++
Sbjct: 438 KAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQ 480



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 158/313 (50%), Gaps = 5/313 (1%)

Query: 263 TFNILIQGLSRIGEVKKAFEFF---YDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHEL 318
           +FN ++  + + G    A EF+    D  SF    P+ +++N +I  LCRV  V +  E+
Sbjct: 138 SFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEV 197

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            + +  ++  + D  TY++++ G C  G++D+A  + +EM   G  P+ V FNVLI    
Sbjct: 198 FRGMSDRNCVA-DGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALC 256

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G++  A  + + M   G +P+ VT++SL+ G C  G+L++ + L + M      PN  
Sbjct: 257 KKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDI 316

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           TF  L++   K  R  D  R L  L+        F Y+ +I G  K G  +    +  EM
Sbjct: 317 TFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEM 376

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            EK CKP+ + ++ LI G C +G+  EA     +M   G  P+  T +SL+    + G  
Sbjct: 377 VEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDI 436

Query: 559 NEAFRIMQRASED 571
           ++A  + +  +++
Sbjct: 437 HKAILVWKEMTDN 449



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 176/404 (43%), Gaps = 62/404 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +N+++ +LC+ G       + D M   G +PN       V      GK D A  LL++ 
Sbjct: 247 AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 306

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +   +   + +L++  VK   A + V +         + + ++++ LI GL + G+ 
Sbjct: 307 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 366

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +   + + +M   GC P+ + Y+ LI GLCR  +     E L E+K K   +P+  TY+S
Sbjct: 367 EHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH-TPNSFTYSS 425

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GY + G + KA  ++ EM         V +++LI+G  K G +  A  + ++MLS G
Sbjct: 426 LMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRG 485

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN--LSPNVYTFTILINALCKENRLN- 454
              DVV +SS+I G+C    + QG+KL ++M   N  L P+V T+ IL+NA C +N ++ 
Sbjct: 486 IKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSR 545

Query: 455 -----------------------------------DARRFLKQLK--------------- 464
                                              D R FL +L                
Sbjct: 546 AIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNI 605

Query: 465 -----WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
                   L+PKP  +   +   CK   V +    ++E + + C
Sbjct: 606 IEVMLQKFLLPKPSTWALAVQQLCKPMKVRKT---ISECQSRMC 646


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 215/469 (45%), Gaps = 41/469 (8%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV +  N    T+N +++ LC +G  +    V+  M   G  P+       +    +
Sbjct: 419 EMLRVGIQSN--VVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFK 476

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G+   A  L +         ST+ +N+++N   K     EA   F     L  +PD  T
Sbjct: 477 MGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVT 536

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +  LI G  ++G V++AF+    M      P I  YN+LI GL +  +     +LL E+ 
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMC 596

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K   SP+VVTY ++I+G+C  G++DKA   Y +M   G  P+ +  + ++    ++G +
Sbjct: 597 LKG-LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRI 655

Query: 384 VSAEYMRERM------LSFGY-----------------------------LPDVVTFSSL 408
             A  + ++M      L  GY                             LP+ V ++  
Sbjct: 656 DEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIA 715

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I G C++G+++   K+   +  +  SP+ +T+  LI+       +NDA     ++    L
Sbjct: 716 IAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGL 775

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I+G CK+GN+D A  +  ++  K   P+ +++ ILI G+C  G   EA+ 
Sbjct: 776 APNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALD 835

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE---DQNL 574
           + NKML+ G +P  IT ++LI    K G   +A  ++    E   DQN+
Sbjct: 836 LRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNI 884



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 202/435 (46%), Gaps = 2/435 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           E  RV      S   ++++++  CE G+  +   VFD M   G +P+       +SS +R
Sbjct: 136 ELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            G+   A  +        +    F  + ++NA  K    + AV   KE   L  + +  T
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           +N LI G   IG++++A      MG  G   + VT   LI G CR  ++    ++L+E++
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
                  D   Y  +I GYC++ KMD A  + +EM + G++ +    N LI+G+ K G +
Sbjct: 316 RSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQV 375

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             AE +  RM+ +   P+  ++S+L+DG+CR G + + + + +EM    +  NV T   L
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSL 435

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           +  LC+     DA      +    + P    Y  ++D   K G    A  +  ++  +  
Sbjct: 436 LKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGY 495

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
                 F  +I G C   +M+EA   FN+M  +G  PD +T  +LI    K G   EAF+
Sbjct: 496 GRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFK 555

Query: 564 IMQRASEDQNLQLPS 578
           + ++  ++    LPS
Sbjct: 556 VKEKMEKEA--ILPS 568



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 189/385 (49%), Gaps = 2/385 (0%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T  L+++  C +  L ++ +V+ +  RS+G + +       +    R  K D A  L  +
Sbjct: 290 TLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDE 349

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + M+ F+ N+L+N   K     EA  +         +P++++++ L+ G  R G 
Sbjct: 350 MLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGL 409

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V KA   + +M   G   ++VT+N+L+ GLCRV        +   +  K   +PD V+Y 
Sbjct: 410 VTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVW-HLMLKRGVTPDEVSYC 468

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++    K+G+  +A  ++N++ + G   S   FN +I+GF K+  M+ AE    RM   
Sbjct: 469 TLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKEL 528

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+ PD VT+ +LIDGYC+ G + +  K+ ++M+ + + P++  +  LI  L K  +  + 
Sbjct: 529 GFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREV 588

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L ++    L P    Y  +I G+C  G +D+A     +M EK   P+ +  + ++  
Sbjct: 589 MDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSS 648

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPD 541
               GR+ EA  +  KM+ +    D
Sbjct: 649 LYRLGRIDEANMLLQKMVNLDVFLD 673



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 35/417 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            +N ++   C+M      +  F+ M+  G  P+       +    + G  + A  +  + 
Sbjct: 501 AFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKM 560

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  S  +YNSL+  L K     E + +  E       P+  T+  LI G    G +
Sbjct: 561 EKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRL 620

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV--------------- 322
            KAF  ++DM   G +P+++  + ++S L R+  +   + LL+++               
Sbjct: 621 DKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRL 680

Query: 323 -------------------KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                                KS   P+ V Y   I+G CK GK+D A  I++ +   G 
Sbjct: 681 HKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGF 740

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P   T+  LI G+   GN+  A  +R+ ML  G  P+++T+++LI+G C++G L++  K
Sbjct: 741 SPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQK 800

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L D++  K L+PNV ++ ILI+  CK     +A     ++    + P    Y+ +I GFC
Sbjct: 801 LFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFC 860

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM-LRIGCA 539
           K G++ +A  ++ EM E     +   F  L+ GH   G + +   + N M + I CA
Sbjct: 861 KQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCA 917



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 201/411 (48%), Gaps = 2/411 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++     +G  +  ++V   M   G L N   +   +    R  K + A+ +L + 
Sbjct: 255 TYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM 314

Query: 218 RPGE-VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
              E + +  + Y  L++   +    D+AV +  E   +  + + +  N LI G  + G+
Sbjct: 315 ERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQ 374

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V +A      M  +   P+  +Y+TL+ G CR   V +   +  E+  +     +VVT+ 
Sbjct: 375 VSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM-LRVGIQSNVVTHN 433

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           S++ G C++G  + A  +++ M   G+ P  V++  L+D   K+G    A  +   +L+ 
Sbjct: 434 SLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILAR 493

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           GY      F+++I+G+C+  ++ +  +  + MK     P+  T+  LI+  CK   + +A
Sbjct: 494 GYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEA 553

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  ++++   ++P   +YN +I G  K+    E   +++EM  K   P+ VT+  LI G
Sbjct: 554 FKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAG 613

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            C +GR+ +A + +  M+  G AP+ I  + ++S L + G  +EA  ++Q+
Sbjct: 614 WCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 664



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 53/293 (18%)

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           + N +A  H   K    +S F P+V ++  ++    +    D+     NE+    + PS 
Sbjct: 71  KFNPIASLH-FFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSK 125

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             ++ L+         V  E +R     F + P V  F  ++  YC  G +   L + D 
Sbjct: 126 NNYSSLV---------VWNELVRV-FEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDN 173

Query: 428 M---------------------KGKN--------------LSPNVYTFTILINALCKENR 452
           M                     KG++              + P+V+T +I++NA CK+  
Sbjct: 174 MGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGW 233

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +N A  F+K++ +         YN +IDG    G+++ A +++  M E+    +KVT T+
Sbjct: 234 VNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTL 293

Query: 513 LIIGHCMKGRMVEAISIFNKMLRI-GCAPDDITVNSLISCLLKGGMPNEAFRI 564
           LI G+C + ++ EA  +  +M R  G   D+     LI    +    ++A R+
Sbjct: 294 LIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRL 346


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 4/312 (1%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+  TF  LI G  + GE+ +AF+ F  M   G  PD++ Y+TLI G  +   +  GH+L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             +   K     DVV ++S I  Y K G +  A+ +Y  M   GI P+ VT+ +LI G  
Sbjct: 344 FSQALHKG-VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G +  A  M  ++L  G  P +VT+SSLIDG+C+ G L  G  L ++M      P+V 
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            + +L++ L K+  +  A RF  ++    +     ++N +IDG+C+    DEA  +   M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
                KPD  TFT ++    M+GR+ EA+ +F +M ++G  PD +   +LI    K   P
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582

Query: 559 N---EAFRIMQR 567
               + F +MQR
Sbjct: 583 TIGLQLFDLMQR 594



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 207/444 (46%), Gaps = 19/444 (4%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD--------GH 187
           P   LK+  ++ ++   + SF T   +   L   G+ D    VFD M ++        G 
Sbjct: 83  PNSALKYFRWAEIS-GKDPSFYT---IAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGS 138

Query: 188 LPN----SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           + +    + + +F +  C R G  D A  +        V +       +LN+L+  +  D
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198

Query: 244 EAVYMFKEYFRLYSQPD-TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                F +  R   +P        ++  L   GEV KA +F   +   G    IV+ N +
Sbjct: 199 LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKV 258

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + GL  V+++     LL  V      +P+VVT+ ++I+G+CK G+MD+A  ++  M   G
Sbjct: 259 LKGL-SVDQIEVASRLLSLV-LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I+P  + ++ LIDG+ K G +     +  + L  G   DVV FSS ID Y ++G L    
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            +   M  + +SPNV T+TILI  LC++ R+ +A     Q+    + P    Y+ +IDGF
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK GN+     +  +M +    PD V + +L+ G   +G M+ A+    KML      + 
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
           +  NSLI    +    +EA ++ +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFR 520



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 179/397 (45%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++   C+ G  D    +F  M   G  P+       +    +AG       L SQ 
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +   +++S ++  VK  +   A  ++K        P+  T+ ILI+GL + G +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +AF  +  +   G  P IVTY++LI G C+   +  G  L +++  K  + PDVV Y  
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGV 466

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ G  K G M  A     +M    I+ + V FN LIDG+ ++     A  +   M  +G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDV TF++++      G+L + L L   M    L P+   +  LI+A CK  +     
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           +    ++ N +     + N VI    K   +++A+     + E + +PD VT+  +I G+
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           C   R+ EA  IF  +      P+ +T+  LI  L K
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 129/304 (42%), Gaps = 38/304 (12%)

Query: 115 RYLCEKLSP--LNSLEVIKRL-DNPKLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMG 170
           R LC+ +SP  +    +IK L  + ++   F  + ++    +  S  TY+ ++   C+ G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
              S   +++ M   G+ P+  +    V    + G    A     +     + ++  ++N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           SL++   + N  DEA+ +F+       +PD  TF  +++     G +++A   F+ M   
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560

Query: 291 GCSPDIVTYNTLISGLCR-----------------------------VNEVARGHELLKE 321
           G  PD + Y TLI   C+                             ++ + + H +   
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620

Query: 322 VKF-----KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            KF     + +  PD+VTY ++I GYC L ++D+A  I+  +      P+ VT  +LI  
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680

Query: 377 FGKV 380
             K+
Sbjct: 681 LCKI 684



 Score = 42.7 bits (99), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 32/64 (50%)

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P+ VTF  LI G C +G M  A  +F  M + G  PD I  ++LI    K GM     ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 565 MQRA 568
             +A
Sbjct: 344 FSQA 347


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 209/442 (47%), Gaps = 37/442 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDG---------------------H--------- 187
           TY +++ SLC+ G+ D    +FD MR  G                     H         
Sbjct: 372 TYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEM 431

Query: 188 -----LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNA 242
                 P++      ++   R G   +A  L  +     V+ + + + +L++   K  N 
Sbjct: 432 VEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNM 491

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           DEA  +F +       P+  TFN++I+G  R+G V+KAF+ +  M   G +PD  TY +L
Sbjct: 492 DEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSL 551

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           IS LC      +  E + +++  +    +  + T+++ G+CK G++ +   I++EM + G
Sbjct: 552 ISVLCLTLGAMKAKEFVDDLE-NNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARG 610

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +K   ++F V++    K+ +      +   M   G  PD V  + +ID + +   + Q L
Sbjct: 611 VKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQAL 670

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
              D+M     SPNV T+T+LIN LCK   L+ A+   +++     +P  F YN  +D  
Sbjct: 671 NCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFL 730

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
              G +++A V+ A + E  C  + VTF  LI G C  G++  AI +       G  PD 
Sbjct: 731 ANEGELEKAKVLHATILEG-CLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDC 789

Query: 543 ITVNSLISCLLKGGMPNEAFRI 564
           I+ +++I+ L K G  N+AF++
Sbjct: 790 ISYSTIINELCKVGDINKAFQL 811



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 205/441 (46%), Gaps = 40/441 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++   C     +    + D M S   +P+     F V    + G  D A  L    
Sbjct: 267 TYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHL 326

Query: 218 RPGEVTM--STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
             GE+ M  + F  N+L++ L K     EA  +F+       +P+  T+ ILI  L + G
Sbjct: 327 --GELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRG 384

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +  A   F  M   G    +  YN+LI+G C+ +   +   LL E+  K   +P   +Y
Sbjct: 385 MMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKG-LAPSAASY 443

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           + +I+G C+ G +  A  ++ EM   G+  +  TF  LI GF K GNM  A  + ++M+ 
Sbjct: 444 SPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMID 503

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
              +P+ VTF+ +I+GYCR G + +  +L D+M  + L+P+ YT+  LI+ LC       
Sbjct: 504 SSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMK 563

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA------------------------ 491
           A+ F+  L+ N +V   F    ++ GFCK G + E                         
Sbjct: 564 AKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVY 623

Query: 492 -----------NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
                      +V+  EM+EK  KPD V  T +I  H  +  +V+A++ ++KM+  GC+P
Sbjct: 624 AALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSP 683

Query: 541 DDITVNSLISCLLKGGMPNEA 561
           + +T   LI+ L K G  + A
Sbjct: 684 NVVTYTVLINHLCKSGYLSSA 704



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 188/377 (49%), Gaps = 7/377 (1%)

Query: 192 PMIEFFVSSCIRA----GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVY 247
           P+ E+  ++ IRA       D A+GLL++     V  S   YN L+  L + N   EAV 
Sbjct: 192 PLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVE 251

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           +           D  T+  L+ G  R  E++ A E   DM S    P + + + ++ GL 
Sbjct: 252 VKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLR 311

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           +   + +   L   +  +    P++    ++I   CK  +  +A  ++  M + G++P+ 
Sbjct: 312 KRGHIDKAFRLACHLG-ELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNE 370

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
           VT+ +LI    K G M  A  M +RM   G    V  ++SLI+GYC++   +Q   L +E
Sbjct: 371 VTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNE 430

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M  K L+P+  +++ LI  LC++  L  A    +++  N +    + +  +I GFCK GN
Sbjct: 431 MVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGN 490

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           +DEA  +  +M +    P++VTF ++I G+C  G + +A  ++++M+  G  PD+ T  S
Sbjct: 491 MDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRS 550

Query: 548 LIS--CLLKGGMPNEAF 562
           LIS  CL  G M  + F
Sbjct: 551 LISVLCLTLGAMKAKEF 567



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 164/355 (46%), Gaps = 1/355 (0%)

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+ L  +    +  +  ++Y + + A  +  N D A  +         +     +N+L+ 
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL R   V +A E    M   G   D VTY TL+ G CR  E+    E+  ++     F 
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDM-LSLHFV 297

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P V + + ++ G  K G +DKA  +   +   G+ P+    N LID   K      AE +
Sbjct: 298 PSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERL 357

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M + G  P+ VT++ LI   C+ G ++  L + D M+ K +   VY +  LIN  C+
Sbjct: 358 FRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQ 417

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +  + AR  L ++    L P    Y+P+I G C+ G++  A  +  EM       +  T
Sbjct: 418 HDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYT 477

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           FT LI G C  G M EA  +F+KM+     P+++T N +I    + G   +AF++
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQL 532



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 176/369 (47%), Gaps = 1/369 (0%)

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           SS +R  +   A  +L       + M  +  + +L AL+K      A  +F E  +    
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
            D + +   I+    I  +  A      M S G     V YN L+ GLCR N V    E+
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
            K    +     D VTY +++ G+C+  +++ A  + ++M S    PS  + + ++DG  
Sbjct: 253 -KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLR 311

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G++  A  +   +   G +P++   ++LID  C++ +  +  +L   M  + L PN  
Sbjct: 312 KRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEV 371

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ ILI++LCK   ++DA     +++   +    + YN +I+G+C+  N  +A  ++ EM
Sbjct: 372 TYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEM 431

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            EK   P   +++ LI G C KG +  A+ +  +M R G + +  T  +LIS   K G  
Sbjct: 432 VEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNM 491

Query: 559 NEAFRIMQR 567
           +EA R+  +
Sbjct: 492 DEAARLFDK 500



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 139/288 (48%), Gaps = 4/288 (1%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY  ++  LC  +G   + + V D + ++  + NS  +   +    + G+      +  +
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFV-DDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDE 605

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   V +    +  ++ A +K ++ ++   +F+E      +PD      +I   S+   
Sbjct: 606 MRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEEN 665

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A   +  M + GCSP++VTY  LI+ LC+   ++    L +E+     F P+  TY 
Sbjct: 666 IVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEM-LVGRFLPNSFTYN 724

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
             +      G+++KA  ++  +   G   + VTFN LI GF K G +  A  + +     
Sbjct: 725 CFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTES 783

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
           G+ PD +++S++I+  C+ G +N+  +L +EM  K L P++  + ILI
Sbjct: 784 GFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 36/282 (12%)

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           S G +    T + ++  L ++ + A   +L  E+  + +F  D   YT+ I  YC++  +
Sbjct: 153 SSGIAMKQYTASQILFALIKIRQFALARDLFDEM-VQCKFPLDEYVYTAGIRAYCEIRNL 211

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D A G+   M S G+K SAV +NVL+ G  +   ++ A  ++  M+  G + D VT+ +L
Sbjct: 212 DGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTL 271

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           + G+CR  +L   L++ D+M   +  P+V + + ++                        
Sbjct: 272 VYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMV------------------------ 307

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                      DG  K G++D+A  +   + E    P+      LI   C   R  EA  
Sbjct: 308 -----------DGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAER 356

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +F  M   G  P+++T   LI  L K GM ++A  +  R  E
Sbjct: 357 LFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMRE 398


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 165/313 (52%), Gaps = 1/313 (0%)

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           +L  LVK    +     ++E          + FNIL+    + G+++ A   F  +  +G
Sbjct: 107 MLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG 166

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
             P +V+YNTL++G  R+ ++  G +L K     S   PDV TY+ +I+G CK  KMD A
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLNEGFKL-KSAMHASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             ++ EM   G+ P+ VTF  LIDG  K G +  A  + ++MLS   LPD++T+++LI G
Sbjct: 226 NELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYG 285

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
            C+ G LNQ   L DEM  K L P+  T+T LI+  CKE  L+ A    K++   ++   
Sbjct: 286 LCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 345

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              Y  +I G C+ G   +A  ++ EM     KPD  T+T++I   C KG + +   +  
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 405

Query: 532 KMLRIGCAPDDIT 544
           +M R G AP  +T
Sbjct: 406 EMQRDGHAPSVVT 418



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 208/431 (48%), Gaps = 28/431 (6%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N +  H+  +Y  ++  LC          +F   +S        +I+  VS   R G
Sbjct: 3   SPANSTFRHTLHSYCTMIHFLC-------THQMFSEAKS--------LIQVVVS---RKG 44

Query: 206 KCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-- 262
           K  A+    +     G      ++++ L+ A ++     +AV    E +RL  +   W  
Sbjct: 45  KGSASAVFAAIIETKGNQRSDIYVFSGLITAYLESGFLRDAV----ECYRLTREHKFWVP 100

Query: 263 --TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T   +++ L ++      + F+ ++   G    +  +N L+   C+  ++     +  
Sbjct: 101 FDTCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFD 160

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  K    P VV+Y ++++GY +LG +++   + + M++ G++P   T++VLI+G  K 
Sbjct: 161 AIT-KWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKE 219

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             M  A  + E ML  G +P+ VTF++LIDG+C+NG+++  +++  +M  ++L P++ T+
Sbjct: 220 SKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITY 279

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI  LCK+  LN A   + ++    L P    Y  +IDG CK G++D A      M +
Sbjct: 280 NTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQ 339

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  + D V +T LI G C +GR V+A  +  +ML  G  PD  T   +I+   K G   +
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWK 399

Query: 561 AFRIMQRASED 571
             ++++    D
Sbjct: 400 GSKLLKEMQRD 410



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 140/281 (49%), Gaps = 1/281 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N++M   C+ G     Q VFD +   G  P+       ++  IR G  +    L S   
Sbjct: 139 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMH 198

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V    + Y+ L+N L K++  D+A  +F+E       P+  TF  LI G  + G V 
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A E +  M S    PD++TYNTLI GLC+   + + H+L+ E+  K    PD +TYT++
Sbjct: 259 LAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKG-LKPDKITYTTL 317

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G +D A      M    I+   V +  LI G  + G  V AE M   MLSFG 
Sbjct: 318 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGL 377

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            PD  T++ +I+ +C+ G + +G KL  EM+    +P+V T
Sbjct: 378 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 135/246 (54%), Gaps = 1/246 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S   YN+L+N  ++  + +E   +         QPD +T+++LI GL +  ++  A E F
Sbjct: 170 SVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 229

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M   G  P+ VT+ TLI G C+   V    E+ K++  +S   PD++TY ++I G CK
Sbjct: 230 EEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQS-LLPDLITYNTLIYGLCK 288

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G +++A  + +EM+  G+KP  +T+  LIDG  K G++ +A   R+RM+      D V 
Sbjct: 289 KGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 348

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LI G C+ G+     K+  EM    L P+  T+T++IN  CK+  +    + LK+++
Sbjct: 349 YTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 408

Query: 465 WNDLVP 470
            +   P
Sbjct: 409 RDGHAP 414



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 1/212 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC+    D    +F+ M   G +PN       +    + G+ D A  +  Q 
Sbjct: 208 TYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQM 267

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      YN+L+  L K+   ++A  +  E      +PD  T+  LI G  + G++
Sbjct: 268 LSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDL 327

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AFE    M       D V Y  LISGLC+        ++++E+       PD  TYT 
Sbjct: 328 DTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREM-LSFGLKPDTGTYTM 386

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
           +I+ +CK G + K + +  EM   G  PS VT
Sbjct: 387 IINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 230/456 (50%), Gaps = 22/456 (4%)

Query: 134 DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRSDGHLP--- 189
           + P+L L+F  +     S+ HS +    V+  L     +D ++ ++ + M  +G  P   
Sbjct: 94  NTPQLVLEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEV 153

Query: 190 -------------NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
                        N  + +  V +C + G    A  ++ + +     ++   +N+ L+ L
Sbjct: 154 LEALNNSYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHL 213

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
           +K N       ++KE        +  TFN+++  L +  ++++A   FY +   G  P++
Sbjct: 214 IKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNV 273

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTSVISGYCKLGKMDKATGI 354
           VT+N ++ G C++ ++    +L+++++  S  S  P+ VTY S+I G+CK+G +  A  +
Sbjct: 274 VTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEEL 333

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
            NEM    I+P+  T+  +I+G+ + G +  A  + + M+  G LP+ V ++S++     
Sbjct: 334 RNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYM 393

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G ++    +  +M  K +  + +T +IL   LC+   +  A +FL Q+  N+L+   F 
Sbjct: 394 EGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFS 453

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           +N +I+  CK+ N   A  ++A M  +   PD VTF  LI GHC +G +  A+ +++KM+
Sbjct: 454 HNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMV 513

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQR 567
           +    P+ +  NS+I+ L K G+ + A     ++QR
Sbjct: 514 KGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQR 549



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 188/396 (47%), Gaps = 7/396 (1%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+N+V+ +LC +  L +++ V +  ++S G  PN       V    + G  D A  L+ +
Sbjct: 240 TFNVVVHALCKDCKLQEALSVFYRILKS-GIWPNVVTFNMMVDGACKMGDMDLALKLVRK 298

Query: 217 FR---PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
                 G +  ++  YNSL++   K      A  +  E  ++  +P+  T+  +I+G SR
Sbjct: 299 MEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSR 358

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G +++A     +M   G  P+ V YN+++  L    +V     +  ++  K +   D  
Sbjct: 359 AGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDK-QIPLDKF 417

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           T + +  G C+ G +  A    N++    +   A + N+LI+   K  N  +A  +  RM
Sbjct: 418 TCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARM 477

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              G +PDVVTF +LIDG+C+ G +   +++ D+M      PN+  +  +IN LCK+  +
Sbjct: 478 YVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLV 537

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           + AR  +  L+   LV     YN +I+G+   G  D+A  +   M+         T+  +
Sbjct: 538 DVARSLVDVLQRMGLVD-TITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTV 596

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           I   C  G + EA  +   M+  G  PD+IT  +L+
Sbjct: 597 IKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLV 632



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 168/353 (47%), Gaps = 2/353 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C++G     + + + M      PN       +    RAG  + A  L  + 
Sbjct: 313 TYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEM 372

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  ++ +YNS+++ L  + + D A  +F +        D +T +IL +GL R G +
Sbjct: 373 VERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYI 432

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A +F   +       D  ++N LI+ LC+ N  A   +LL  +  +    PDVVT+ +
Sbjct: 433 TTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRG-LVPDVVTFGT 491

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G+CK G ++ A  +Y++M     KP+ + +N +I+G  K G +  A  + + +   G
Sbjct: 492 LIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMG 551

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            L D +T+++LI+GY   G+ ++  KL   M+   +  +  T+  +I  LCK   + +A+
Sbjct: 552 -LVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAK 610

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
             +  +    ++P    Y  ++    K  + +E   +   M  K   PDK+T+
Sbjct: 611 ELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTY 663



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 140/298 (46%), Gaps = 12/298 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-----DAAKG 212
            YN +M  L   G  D   +VF  M SD  +P    ++ F  S +  G C       A  
Sbjct: 383 VYNSIMHWLYMEGDVDGASLVFTDM-SDKQIP----LDKFTCSILTRGLCRNGYITTALK 437

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
            L+Q     +    F +N L+N L K NN   A  +    +     PD  TF  LI G  
Sbjct: 438 FLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHC 497

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G ++ A + +  M      P+++ YN++I+GLC+   V     L+  ++       D 
Sbjct: 498 KEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV--DT 555

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TY ++I+GY   GK DKA  +   M + GI  S+ T+N +I    K G +  A+ +   
Sbjct: 556 ITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTM 615

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
           M+ +G LPD +T+ +L+    +N    + ++L D M  K + P+  T+  +++ L +E
Sbjct: 616 MVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQE 673



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 146/311 (46%), Gaps = 9/311 (2%)

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           + GLS + EV +A    Y +    C  +   ++ L+    ++       E++K+++ +  
Sbjct: 145 VNGLSPL-EVLEALNNSYGI----CESNHAVFDALVRACTQIGATVGACEVIKKLQIEGC 199

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           +   +  + + +S   K+ ++ +   +Y EM S G   +  TFNV++    K   +  A 
Sbjct: 200 WVT-IHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEAL 258

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK---GKNLSPNVYTFTILI 444
            +  R+L  G  P+VVTF+ ++DG C+ G ++  LKL  +M+     ++ PN  T+  LI
Sbjct: 259 SVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLI 318

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +  CK   +  A     ++   D+ P    Y  +I+G+ +AG ++EA  +  EM E+   
Sbjct: 319 DGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLL 378

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P+ V +  ++    M+G +  A  +F  M       D  T + L   L + G    A + 
Sbjct: 379 PNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKF 438

Query: 565 MQRASEDQNLQ 575
           + +  E+  ++
Sbjct: 439 LNQVLENNLIE 449


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 194/435 (44%), Gaps = 36/435 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +Y+++++SLC+ G       +   M   G +  PN       +    + G  + A  L  
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     +      YNS+++AL K    D+A    ++       P+ WT+N LI G S  G
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 303

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-------- 327
           + K+A   F +M      PD+VT + L+  LC+  ++    ++   +  K +        
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363

Query: 328 --------------------------FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
                                      +PD  T+  +I  Y   G +DKA  I+NEM   
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423

Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
           G+KP  VT+  +I    ++G M  A     +M+  G  PD   ++ LI G+C +G L + 
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 483

Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +L  E+    +  ++  F+ +IN LCK  R+ DA+          L P   +Y+ ++DG
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 543

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           +C  G +++A  +   M     +P+ V +  L+ G+C  GR+ E +S+F +ML+ G  P 
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 603

Query: 542 DITVNSLISCLLKGG 556
            I  + +I  L + G
Sbjct: 604 TILYSIIIDGLFQAG 618



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 205/422 (48%), Gaps = 4/422 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T +++M SLC+ G     + VFD M   G  P+       ++     G       L    
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + +N L+ A       D+A+ +F E      +PD  T+  +I  L RIG++
Sbjct: 386 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A E F  M   G +PD   YN LI G C    + +  EL+ E+   +    D+V ++S
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEI-MNNGMHLDIVFFSS 504

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CKLG++  A  I++   + G+ P AV +++L+DG+  VG M  A  + + M+S G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+VV + +L++GYC+ G++++GL L  EM  + + P+   ++I+I+ L +  R   A+
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
               ++  + +      YN V+ G  K    DEA  +  E+     K + +T   +I G 
Sbjct: 625 VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
               R+ EA  +F  + R    P  +T + +I+ L+K G+  EA   F  MQ A  + N 
Sbjct: 685 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNS 744

Query: 575 QL 576
           +L
Sbjct: 745 RL 746



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 177/365 (48%), Gaps = 4/365 (1%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV-Y 247
           P S      +  C RA + + A     Q     + ++  + N LL    +    DEA+  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYNTLISG 305
           +      L   PD ++++IL++ L   G+  +A +    M   G  CSP++V YNT+I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             +  +V +  +L KE+  +    PD+VTY SV+   CK   MDKA     +M +  + P
Sbjct: 229 FFKEGDVNKACDLFKEM-VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
           +  T+N LI G+   G    A  + + M     LPDVVT S L+   C+ G++ +   + 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           D M  K  +P+V+++ I++N    +  L D       +  + + P  + +N +I  +   
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 407

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G +D+A +I  EM +   KPD VT+  +I   C  G+M +A+  FN+M+  G APD    
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 546 NSLIS 550
           N LI 
Sbjct: 468 NCLIQ 472



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 209/442 (47%), Gaps = 7/442 (1%)

Query: 127 LEVIKRLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHD-SVQVVFDYMRS 184
           ++   R   P+L L F  +  R  L +N      N ++   CE    D ++ ++      
Sbjct: 118 MDCCTRAHRPELALAFFGQLLRTGLRVN--IIIANHLLEGFCEAKRTDEALDILLHRTPE 175

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMS--TFMYNSLLNALVKQNNA 242
            G +P+       + S    GK   A  LL     G    S     YN++++   K+ + 
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 235

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           ++A  +FKE  +    PD  T+N ++  L +   + KA  F   M +    P+  TYN L
Sbjct: 236 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 295

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G     +      + KE++ +    PDVVT + ++   CK GK+ +A  +++ M   G
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMR-RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
             P   ++N++++G+   G +V    + + ML  G  PD  TF+ LI  Y   G L++ +
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 414

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            + +EM+   + P+V T+  +I ALC+  +++DA     Q+    + P  + YN +I GF
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 474

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C  G++ +A  +++E+       D V F+ +I   C  GR+++A +IF+  + +G  PD 
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 534

Query: 543 ITVNSLISCLLKGGMPNEAFRI 564
           +  + L+      G   +A R+
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRV 556



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 191/397 (48%), Gaps = 1/397 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++      G    +  +FD M  DG  P+       + +    G  D A  + ++ 
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      Y +++ AL +    D+A+  F +       PD + +N LIQG    G +
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 480

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA E   ++ + G   DIV ++++I+ LC++  V     +  ++       PD V Y+ 
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF-DLTVNVGLHPDAVVYSM 539

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++ GYC +GKM+KA  +++ M S GI+P+ V +  L++G+ K+G +     +   ML  G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 599

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  + +S +IDG  + G+         EM    ++ ++ T+ I++  L K    ++A 
Sbjct: 600 IKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 659

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              K+L+  ++       N +IDG  +   V+EA  + A +   R  P  VT++I+I   
Sbjct: 660 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 719

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             +G + EA  +F+ M   GC P+   +N ++  LLK
Sbjct: 720 IKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 756



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 188/405 (46%), Gaps = 1/405 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN V+ +LC+    D  +     M +   LPN+      +      G+   A  +  + 
Sbjct: 256 TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   +       + L+ +L K     EA  +F         PD +++NI++ G +  G +
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 375

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               + F  M   G +PD  T+N LI        + +   +  E++      PDVVTY +
Sbjct: 376 VDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR-DHGVKPDVVTYRT 434

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI+  C++GKMD A   +N+M   G+ P    +N LI GF   G+++ A+ +   +++ G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              D+V FSS+I+  C+ G++     + D      L P+   +++L++  C   ++  A 
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 554

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           R    +    + P   +Y  +++G+CK G +DE   +  EM ++  KP  + ++I+I G 
Sbjct: 555 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              GR V A   F++M   G A D  T N ++  L K    +EA 
Sbjct: 615 FQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 659



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 190/410 (46%), Gaps = 1/410 (0%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F T+N+++++    G+ D   ++F+ MR  G  P+       +++  R GK D A    +
Sbjct: 394 FYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFN 453

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           Q     V    + YN L+       +  +A  +  E        D   F+ +I  L ++G
Sbjct: 454 QMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 513

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V  A   F    + G  PD V Y+ L+ G C V ++ +   +  +    +   P+VV Y
Sbjct: 514 RVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF-DAMVSAGIEPNVVVY 572

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++++GYCK+G++D+   ++ EM   GIKPS + ++++IDG  + G  V A+     M  
Sbjct: 573 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTE 632

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G   D+ T++ ++ G  +N   ++ + L  E++  N+  N+ T   +I+ + +  R+ +
Sbjct: 633 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 692

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+     +  + LVP    Y+ +I    K G V+EA  + + M+   C+P+      ++ 
Sbjct: 693 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 752

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
               K  +V A +  +K+     + + +T   L+      G   E  R +
Sbjct: 753 ELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 2/308 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P + T+ IL+   +R    + A  FF  +   G   +I+  N L+ G C         ++
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI--KPSAVTFNVLIDG 376
           L     +    PDV +Y+ ++   C  GK  +A  +   M   G    P+ V +N +IDG
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G++  A  + + M+  G  PD+VT++S++   C+   +++      +M  K + PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
            +T+  LI       +  +A R  K+++ + ++P     + ++   CK G + EA  +  
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            M  K   PD  ++ I++ G+  KG +V+   +F+ ML  G APD  T N LI      G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 557 MPNEAFRI 564
           M ++A  I
Sbjct: 409 MLDKAMII 416



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
            SP   TY  ++    +  + + A   + ++   G++ + +  N L++GF +      A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILI 444
           + +  R    G +PDV ++S L+   C  G+  Q   L   M   G   SPNV  +  +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
           +   KE  +N A    K++    + P    YN V+   CKA  +D+A   + +M  KR  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           P+  T+  LI G+   G+  EA+ +F +M R    PD +T++ L+  L K G   EA
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 10/274 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           VN+ L+     Y+++M   C +G  +    VFD M S G  PN  +    V+   + G+ 
Sbjct: 526 VNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRI 585

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           D    L  +     +  ST +Y+ +++ L +      A   F E        D  T+NI+
Sbjct: 586 DEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIV 645

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           ++GL +     +A   F ++ +     +I+T NT+I G+ +   V    +L   +  +S 
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS-RSR 704

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA- 386
             P VVTY+ +I+   K G +++A  +++ M + G +P++   N ++    K   +V A 
Sbjct: 705 LVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAG 764

Query: 387 ---EYMRERMLSFGYLPDVV---TFSSLIDGYCR 414
                + ER  S  +L  ++    FSS   G CR
Sbjct: 765 AYLSKIDERNFSLEHLTTMLLVDLFSS--KGTCR 796



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 3/207 (1%)

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P++ T+ +L+D   +      A     ++L  G   +++  + L++G+C   + ++ L
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 423 K-LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV--PKPFMYNPVI 479
             L          P+V++++IL+ +LC + +   A   L+ +     V  P    YN VI
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           DGF K G+V++A  +  EM ++   PD VT+  ++   C    M +A +   +M+     
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
           P++ T N+LI      G   EA R+ +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFK 313


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 194/408 (47%), Gaps = 1/408 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++   C+ G           ++  G LP        ++   +AG+ +A   LL++  
Sbjct: 239 YNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMA 298

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              + M+  ++N++++A  K     +A    +    +   PD  T+N +I    + G +K
Sbjct: 299 ARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIK 358

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A EF       G  P+  +Y  L+   C+  +  +   +L  +    E  PD+V+Y + 
Sbjct: 359 EADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGE-KPDLVSYGAF 417

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G    G++D A  +  +M   G+ P A  +NVL+ G  K G   + + +   ML    
Sbjct: 418 IHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNV 477

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PDV  F++L+DG+ RNG+L++ +K+   +  K + P +  +  +I   CK  ++ DA  
Sbjct: 478 QPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALS 537

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
            L ++K     P  + Y+ VIDG+ K  ++  A  +  +M + + KP+ +T+T LI G C
Sbjct: 538 CLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFC 597

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            K  M+ A  +F  M      P+ +T  +L+    K G P +A  I +
Sbjct: 598 KKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFE 645



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 219/480 (45%), Gaps = 42/480 (8%)

Query: 129 VIKRLDNPKLGLKFLEFSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           VI R+ + +L LKF +++     S +     ++ +++ L    +   +++V + M++   
Sbjct: 63  VIDRVHDAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHL 122

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMY-NSLLNALVKQNNADEAV 246
            P        + +   +G  D A  L    R     + T +  NSLLN LVK    D A+
Sbjct: 123 KPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVAL 182

Query: 247 YMFKEYFRLYSQP----DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
            ++ +  +         D +T +I+++GL  +G++++      D    GC P +V YN +
Sbjct: 183 QLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMI 242

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           I G C+  ++      LKE+K K    P V TY ++I+G+CK G+ +    +  EM + G
Sbjct: 243 IDGYCKKGDLQCATRTLKELKMKGVL-PTVETYGALINGFCKAGEFEAVDQLLTEMAARG 301

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           +  +   FN +ID   K G +  A     RM   G  PD+ T++++I+  C+ G++ +  
Sbjct: 302 LNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEAD 361

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL----KWNDLV--------- 469
           +  ++ K + L PN +++T L++A CK+     A   L ++    +  DLV         
Sbjct: 362 EFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGV 421

Query: 470 ----------------------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
                                 P   +YN ++ G CK G      ++++EM ++  +PD 
Sbjct: 422 VVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDV 481

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             F  L+ G    G + EAI IF  ++R G  P  +  N++I    K G   +A   + +
Sbjct: 482 YVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNK 541



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 204/458 (44%), Gaps = 34/458 (7%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           +FLE ++    L + F +Y  +M + C+ G +     +   +   G  P+      F+  
Sbjct: 362 EFLEKAKERGLLPNKF-SYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHG 420

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            +  G+ D A  +  +     V     +YN L++ L K         +  E      QPD
Sbjct: 421 VVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPD 480

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            + F  L+ G  R GE+ +A + F  +   G  P IV YN +I G C+  ++      L 
Sbjct: 481 VYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 540

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           ++K     +PD  TY++VI GY K   M  A  ++ +M     KP+ +T+  LI+GF K 
Sbjct: 541 KMK-NVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKK 599

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
            +M+ AE +   M SF  +P+VVT+++L+ G+ + G+  +   + + M      PN  TF
Sbjct: 600 ADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATF 659

Query: 441 TILINALC----------KENRLNDARRFLKQL-------KWNDLVPKPFMYNPVIDGFC 483
             LIN L           +++ + + R  +           W+ ++     YN VI   C
Sbjct: 660 HYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAA---YNSVIVCLC 716

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G VD A +++ +M  K    D V FT ++ G C KG+  E  +I      I C  + I
Sbjct: 717 KHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNI------ISCDLNKI 770

Query: 544 TVNSLISC------LLKGGMPNEAFRIMQRASEDQNLQ 575
            + + +         L  G  +EA  I+Q   E+  ++
Sbjct: 771 ELQTAVKYSLTLDKYLYQGRLSEASVILQTLIEEDRVR 808


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 163/312 (52%), Gaps = 4/312 (1%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+  TF  LI G  + GE+ +AF+ F  M   G  PD++ Y+TLI G  +   +  GH+L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
             +   K     DVV ++S I  Y K G +  A+ +Y  M   GI P+ VT+ +LI G  
Sbjct: 344 FSQALHKG-VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G +  A  M  ++L  G  P +VT+SSLIDG+C+ G L  G  L ++M      P+V 
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            + +L++ L K+  +  A RF  ++    +     ++N +IDG+C+    DEA  +   M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
                KPD  TFT ++    M+GR+ EA+ +F +M ++G  PD +   +LI    K   P
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582

Query: 559 N---EAFRIMQR 567
               + F +MQR
Sbjct: 583 TIGLQLFDLMQR 594



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 195/448 (43%), Gaps = 36/448 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+  ++   C+ G  D    +F  M   G  P+       +    +AG       L SQ 
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V +   +++S ++  VK  +   A  ++K        P+  T+ ILI+GL + G +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY-- 335
            +AF  +  +   G  P IVTY++LI G C+   +  G  L +++  K  + PDVV Y  
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGV 466

Query: 336 ---------------------------------TSVISGYCKLGKMDKATGIYNEMNSCG 362
                                             S+I G+C+L + D+A  ++  M   G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           IKP   TF  ++      G +  A ++  RM   G  PD + + +LID +C++ +   GL
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           +L D M+   +S ++    ++I+ L K +R+ DA +F   L    + P    YN +I G+
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C    +DEA  I   ++     P+ VT TILI   C    M  AI +F+ M   G  P+ 
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +T   L+    K      +F++ +   E
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQE 734



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 210/438 (47%), Gaps = 5/438 (1%)

Query: 115 RYLCEKLSP--LNSLEVIKRL-DNPKLGLKFLEFSRV-NLSLNHSFKTYNLVMRSLCEMG 170
           R LC+ +SP  +    +IK L  + ++   F  + ++    +  S  TY+ ++   C+ G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
              S   +++ M   G+ P+  +    V    + G    A     +     + ++  ++N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
           SL++   + N  DEA+ +F+       +PD  TF  +++     G +++A   F+ M   
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560

Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           G  PD + Y TLI   C+  +   G +L   ++ +++ S D+     VI    K  +++ 
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ-RNKISADIAVCNVVIHLLFKCHRIED 619

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A+  +N +    ++P  VT+N +I G+  +  +  AE + E +    + P+ VT + LI 
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
             C+N  ++  +++   M  K   PN  T+  L++   K   +  + +  ++++   + P
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
               Y+ +IDG CK G VDEA  I  +  + +  PD V + ILI G+C  GR+VEA  ++
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799

Query: 531 NKMLRIGCAPDDITVNSL 548
             MLR G  PDD+   +L
Sbjct: 800 EHMLRNGVKPDDLLQRAL 817



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 207/444 (46%), Gaps = 19/444 (4%)

Query: 136 PKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSD--------GH 187
           P   LK+  ++ ++   + SF T   +   L   G+ D    VFD M ++        G 
Sbjct: 83  PNSALKYFRWAEIS-GKDPSFYT---IAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGS 138

Query: 188 LPN----SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNAD 243
           + +    + + +F +  C R G  D A  +        V +       +LN+L+  +  D
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198

Query: 244 EAVYMFKEYFRLYSQPD-TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                F +  R   +P        ++  L   GEV KA +F   +   G    IV+ N +
Sbjct: 199 LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKV 258

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           + GL  V+++     LL  V      +P+VVT+ ++I+G+CK G+MD+A  ++  M   G
Sbjct: 259 LKGL-SVDQIEVASRLLSLV-LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I+P  + ++ LIDG+ K G +     +  + L  G   DVV FSS ID Y ++G L    
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
            +   M  + +SPNV T+TILI  LC++ R+ +A     Q+    + P    Y+ +IDGF
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           CK GN+     +  +M +    PD V + +L+ G   +G M+ A+    KML      + 
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
           +  NSLI    +    +EA ++ +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFR 520



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 32/64 (50%)

Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           P+ VTF  LI G C +G M  A  +F  M + G  PD I  ++LI    K GM     ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 565 MQRA 568
             +A
Sbjct: 344 FSQA 347


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 192/410 (46%), Gaps = 1/410 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++ +LCE G   +   +   M   G  P +      ++   + G+  AA  L+   
Sbjct: 177 TFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCM 236

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    YN  ++ L + + + +   + K   R    P+  T+N LI G  R G++
Sbjct: 237 ASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKI 296

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + A + F +M  F   P+ +TYNTLI+G C    +     L+ +V       P+ VTY +
Sbjct: 297 EVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLM-DVMVSHGLRPNEVTYGA 355

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G  K  +    + I   M   G++ S +++  +IDG  K G +  A  + + ML   
Sbjct: 356 LLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVS 415

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVVTFS LI+G+ R G++N   ++  +M    L PN   ++ LI   CK   L +A 
Sbjct: 416 VNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEAL 475

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  +  V   F  N ++  FC+ G ++EA   +  M      P+ VTF  +I G+
Sbjct: 476 NAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGY 535

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              G  ++A S+F+KM   G  P   T   L+  L  GG  NEA +   R
Sbjct: 536 GNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHR 585



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 202/430 (46%), Gaps = 37/430 (8%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           D+VQ  F  M   G  P+       + S ++  K D             +      +N L
Sbjct: 123 DAVQT-FYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNIL 181

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           LNAL ++     A ++ ++       P   T+N L+    + G  K A +    M S G 
Sbjct: 182 LNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGI 241

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
             D+ TYN  I  LCR +  A+G+ LLK ++ ++   P+ +TY ++ISG+ + GK++ AT
Sbjct: 242 GVDVCTYNVFIDNLCRDSRSAKGYLLLKRMR-RNMVYPNEITYNTLISGFVREGKIEVAT 300

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL---- 408
            +++EM+   + P+++T+N LI G    GN+  A  + + M+S G  P+ VT+ +L    
Sbjct: 301 KVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGL 360

Query: 409 -------------------------------IDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
                                          IDG C+NG L + ++L D+M   +++P+V
Sbjct: 361 YKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDV 420

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            TF++LIN   +  ++N+A+  + ++    LVP   +Y+ +I  +CK G + EA    A 
Sbjct: 421 VTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAV 480

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M       D  T  +L+   C  G++ EA    N M R+G  P+ +T + +I+     G 
Sbjct: 481 MNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGD 540

Query: 558 PNEAFRIMQR 567
             +AF +  +
Sbjct: 541 ALKAFSVFDK 550



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 197/416 (47%), Gaps = 14/416 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS-- 215
           TYN ++      G  +    VFD M     LPNS      ++     G    A  L+   
Sbjct: 282 TYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVM 341

Query: 216 ---QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGL 271
                RP EVT     Y +LLN L K N     V    E  R+   +    ++  +I GL
Sbjct: 342 VSHGLRPNEVT-----YGALLNGLYK-NAEFGMVSSILERMRMGGVRVSHISYTAMIDGL 395

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G +++A +   DM     +PD+VT++ LI+G  RV ++    E++ ++ +K+   P+
Sbjct: 396 CKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKM-YKTGLVPN 454

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            + Y+++I  YCK+G + +A   Y  MN  G      T NVL+  F + G +  AEY   
Sbjct: 455 GILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMN 514

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M   G  P+ VTF  +I+GY  +G   +   + D+M      P+++T+  L+  LC   
Sbjct: 515 HMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGG 574

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            +N+A +F  +L+         ++N  +   C++GN+ +A  ++ EM      PD  T+T
Sbjct: 575 HINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIG-CAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            LI G C KG++V A+ +  K +  G  +P+     SL+  LLK G    A  I +
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFE 690



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 199/451 (44%), Gaps = 42/451 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C+ G + +   + D M S G   +      F+ +  R  +      LL + 
Sbjct: 212 TYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRM 271

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V  +   YN+L++  V++   + A  +F E       P++ T+N LI G    G +
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNI 331

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A      M S G  P+ VTY  L++GL +  E      +L+ ++         ++YT+
Sbjct: 332 GEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGG-VRVSHISYTA 390

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CK G +++A  + ++M    + P  VTF+VLI+GF +VG + +A+ +  +M   G
Sbjct: 391 MIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG 450

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            +P+ + +S+LI  YC+ G L + L     M       + +T  +L+   C+  +L +A 
Sbjct: 451 LVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAE 510

Query: 458 RFLKQL---------------------------------KWNDL--VPKPFMYNPVIDGF 482
            F+  +                                 K N     P  F Y  ++ G 
Sbjct: 511 YFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGL 570

Query: 483 CKAGNVDEANVIVAEMEEKRCKP---DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
           C  G+++EA   +      RC P   D V F   +   C  G + +AI++ N+M+     
Sbjct: 571 CIGGHINEA---LKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFL 627

Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           PD+ T  +LI+ L K G    A  +  +A E
Sbjct: 628 PDNFTYTNLIAGLCKKGKIVAALLLSGKAIE 658



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 205/455 (45%), Gaps = 39/455 (8%)

Query: 159  YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
            +N  + S C  G L D++ ++ + M ++  LP++      ++   + GK  AA  L  + 
Sbjct: 598  FNTKLTSTCRSGNLSDAIALI-NEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKA 656

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
               G ++ +  +Y SL++ L+K  +A  A+Y+F+E      +PDT  FN++I   SR G+
Sbjct: 657  IEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGK 716

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              K  +    M S     ++ TYN L+ G  + + +AR   L K++  +  F PD  ++ 
Sbjct: 717  TSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDM-IRHGFLPDKFSWH 775

Query: 337  SVISGYCK-----------------------------------LGKMDKATGIYNEMNSC 361
            S+I GYC+                                     +M KA  +  +MN  
Sbjct: 776  SLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQF 835

Query: 362  GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
             + P+  T+N L +G  +  +   A  + + +L  G +P    + +LI+G CR G +   
Sbjct: 836  MVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGA 895

Query: 422  LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            +KL DEMK   +S +    + ++  L    ++ +A   L  +    ++P    +  ++  
Sbjct: 896  MKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHV 955

Query: 482  FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
            +CK  NV +A  + + ME    K D V + +LI G C  G +  A  ++ +M +    P+
Sbjct: 956  YCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPN 1015

Query: 542  DITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
                  LI     G    E+ ++++   + + ++L
Sbjct: 1016 TSIYIVLIDSFCAGNYQIESEKLLRDIQDRELMRL 1050



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/450 (22%), Positives = 185/450 (41%), Gaps = 35/450 (7%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N+++ + C  G  +  +   ++M   G  PNS   +  ++    +G    A  +  + 
Sbjct: 492 TCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKM 551

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  S F Y  LL  L    + +EA+  F     + +  D   FN  +    R G +
Sbjct: 552 NSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNL 611

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     +M +    PD  TY  LI+GLC+  ++     L  +   K   SP+   YTS
Sbjct: 612 SDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTS 671

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID---------------------- 375
           ++ G  K G    A  I+ EM +  ++P  V FNV+ID                      
Sbjct: 672 LVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKN 731

Query: 376 -------------GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                        G+ K   M     + + M+  G+LPD  ++ SLI GYC++   +  +
Sbjct: 732 LCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAI 791

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           K+   +  +    + +TF +LI   C+ N +  A   +KQ+    ++P    YN + +G 
Sbjct: 792 KILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGL 851

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            +  +  +A+ ++  + E    P    +  LI G C  G +  A+ + ++M  +G +  +
Sbjct: 852 IRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHN 911

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           + +++++  L        A  ++    E Q
Sbjct: 912 VAMSAIVRGLANSKKIENAIWVLDLMLEMQ 941



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%)

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            F  LI    RN  +   ++    M  + L+P+VYT  +++ +L KE +++    F K +
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    +N +++  C+ G    A  ++ +MEE    P  VT+  L+  +C KGR 
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             A  + + M   G   D  T N  I  L +     + + +++R
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKR 270



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/167 (19%), Positives = 73/167 (43%)

Query: 157  KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
            K Y  ++  +C +G       + D M++ G   ++  +   V     + K + A  +L  
Sbjct: 877  KQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDL 936

Query: 217  FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                ++  +   + +L++   K+ N  +A+ +       + + D   +N+LI GL   G+
Sbjct: 937  MLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGD 996

Query: 277  VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            ++ AF+ + +M      P+   Y  LI   C  N      +LL++++
Sbjct: 997  IEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQ 1043



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 54/132 (40%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           + N   F +LI    +   + DA +    + +  L P  +  N V+    K   VD    
Sbjct: 102 NSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWS 161

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
               M  K   PD  TF IL+   C +G+   A  +  KM   G  P  +T N+L++   
Sbjct: 162 FFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYC 221

Query: 554 KGGMPNEAFRIM 565
           K G    A +++
Sbjct: 222 KKGRYKAASQLI 233


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 172/337 (51%), Gaps = 1/337 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           Y++++N   K+ + D+    + E       P+  T+N +I  L +   V KA E    M 
Sbjct: 91  YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  PD +TYN+++ G C   +       LK+++      PDVVTY S++   CK G+ 
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMR-SDGVEPDVVTYNSLMDYLCKNGRC 209

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            +A  I++ M   G+KP   T+  L+ G+   G +V    + + M+  G  P+   FS L
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +  Y +  ++ + + +  +M+ + L+PN  T+  +I  LCK  R+ DA  + +Q+    L
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P   +YN +I G C     + A  ++ EM ++    + + F  +I  HC +GR++E+  
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +F+ M+RIG  PD IT ++LI      G  +EA +++
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 197/434 (45%), Gaps = 38/434 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGH--LPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +YN+++  LC+         +   M  DG    P+       ++   + G  D      +
Sbjct: 53  SYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYN 112

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     ++ +   YNS++ AL K    D+A+ +     +    PD  T+N ++ G    G
Sbjct: 113 EMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 172

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           + K+A  F   M S G  PD+VTYN+L+  LC+        ++   +  K    P++ TY
Sbjct: 173 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT-KRGLKPEITTY 231

Query: 336 TSVISGYCKLG-----------------------------------KMDKATGIYNEMNS 360
            +++ GY   G                                   K+++A  ++++M  
Sbjct: 232 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQ 291

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+ P+AVT+  +I    K G +  A    E+M+  G  P  + ++SLI G C   +  +
Sbjct: 292 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 351

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             +L  EM  + +  N   F  +I++ CKE R+ ++ +    +    + P    Y+ +ID
Sbjct: 352 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 411

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
           G+C AG +DEA  ++A M     KPD VT++ LI G+C   RM +A+ +F +M   G +P
Sbjct: 412 GYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSP 471

Query: 541 DDITVNSLISCLLK 554
           D IT N ++  L +
Sbjct: 472 DIITYNIILQGLFQ 485



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 167/312 (53%), Gaps = 4/312 (1%)

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG--CSPDIVTYN 300
           ++A ++F E  R    PD +++NIL+ GL      ++A E  + M   G  C PD+V+Y+
Sbjct: 34  EDARHVFDELLR-RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           T+I+G  +  ++ + +    E+      SP+VVTY S+I+  CK   +DKA  +   M  
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEM-LDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G+ P  +T+N ++ GF   G    A    ++M S G  PDVVT++SL+D  C+NG+  +
Sbjct: 152 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 211

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
             K+ D M  + L P + T+  L+     +  L +    L  +  N + P  ++++ ++ 
Sbjct: 212 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 271

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            + K   V+EA ++ ++M ++   P+ VT+  +I   C  GR+ +A+  F +M+  G +P
Sbjct: 272 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331

Query: 541 DDITVNSLISCL 552
            +I  NSLI  L
Sbjct: 332 GNIVYNSLIHGL 343



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 183/404 (45%), Gaps = 1/404 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G      V    MRSDG  P+       +    + G+C  A+ +    
Sbjct: 160 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 219

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      Y +LL     +    E   +     R    P+ + F+IL+   ++  +V
Sbjct: 220 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A   F  M   G +P+ VTY  +I  LC+   V     L  E       SP  + Y S
Sbjct: 280 EEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM-LYFEQMIDEGLSPGNIVYNS 338

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   K ++A  +  EM   GI  + + FN +ID   K G ++ +E + + M+  G
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 398

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++T+S+LIDGYC  G++++  KL   M    + P+  T++ LIN  CK +R+ DA 
Sbjct: 399 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDAL 458

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              ++++ + + P    YN ++ G  +      A  +   + +   + +  T+ I++ G 
Sbjct: 459 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGL 518

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C      +A+ +F  +  +    +  T N +I  LLK G  +EA
Sbjct: 519 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 562



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 188/409 (45%), Gaps = 1/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++ +LC+    D    V   M   G +P+       V     +G+   A   L + 
Sbjct: 125 TYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM 184

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   V      YNSL++ L K     EA  +F    +   +P+  T+  L+QG +  G +
Sbjct: 185 RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 244

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +       M   G  P+   ++ L+    +  +V     +  +++ +   +P+ VTY +
Sbjct: 245 VEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR-QQGLNPNAVTYGA 303

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI   CK G+++ A   + +M   G+ P  + +N LI G         AE +   ML  G
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 363

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              + + F+S+ID +C+ G++ +  KL D M    + P++ T++ LI+  C   ++++A 
Sbjct: 364 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 423

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L  +    + P    Y+ +I+G+CK   + +A V+  EME     PD +T+ I++ G 
Sbjct: 424 KLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
               R   A  ++  + + G   +  T N ++  L K  + ++A R+ Q
Sbjct: 484 FQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQ 532



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 184/405 (45%), Gaps = 1/405 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L     TY  +++     G    +  + D M  +G  PN  +    V +  +  K + A 
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 283

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            + S+ R   +  +   Y +++  L K    ++A+  F++       P    +N LI GL
Sbjct: 284 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 343

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
               + ++A E   +M   G   + + +N++I   C+   V    +L  ++  +    PD
Sbjct: 344 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF-DLMVRIGVKPD 402

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           ++TY+++I GYC  GKMD+AT +   M S G+KP  VT++ LI+G+ K+  M  A  +  
Sbjct: 403 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFR 462

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M S G  PD++T++ ++ G  +  +     +L   +        + T+ I+++ LCK  
Sbjct: 463 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNK 522

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
             +DA R  + L   DL  +   +N +ID   K G  DEA  +          P+  T+ 
Sbjct: 523 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 582

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           ++      +G + E   +F  M   GC  D   +N ++  LL+ G
Sbjct: 583 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 627



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 143/270 (52%), Gaps = 1/270 (0%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVTYTSVISGYCKLGKMDKAT 352
           PD+ +YN L++GLC  N      ELL  +     +  PDVV+Y++VI+G+ K G +DK  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
             YNEM    I P+ VT+N +I    K   +  A  +   M+  G +PD +T++S++ G+
Sbjct: 109 STYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 168

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C +GQ  + +    +M+   + P+V T+  L++ LCK  R  +AR+    +    L P+ 
Sbjct: 169 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEI 228

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
             Y  ++ G+   G + E + ++  M      P+   F+IL+  +  + ++ EA+ +F+K
Sbjct: 229 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 288

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           M + G  P+ +T  ++I  L K G   +A 
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRVEDAM 318



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 178/393 (45%), Gaps = 2/393 (0%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           +   +VF  MR  G  PN+      +    ++G+ + A     Q     ++    +YNSL
Sbjct: 280 EEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 339

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++ L   N  + A  +  E        +T  FN +I    + G V ++ + F  M   G 
Sbjct: 340 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 399

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
            PDI+TY+TLI G C   ++    +LL  +       PD VTY+++I+GYCK+ +M  A 
Sbjct: 400 KPDIITYSTLIDGYCLAGKMDEATKLLASM-VSVGMKPDCVTYSTLINGYCKISRMKDAL 458

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ EM S G+ P  +T+N+++ G  +     +A+ +   +   G   ++ T++ ++ G 
Sbjct: 459 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGL 518

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+N   +  L++   +   +L     TF I+I+AL K  R ++A+        N LVP  
Sbjct: 519 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 578

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
           + Y  + +     G ++E + +   ME+  C  D      ++     +G +  A   +  
Sbjct: 579 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLS 637

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           M+       + +  SL   LL GG   E  R +
Sbjct: 638 MIDEKHFSLEASTASLFIDLLSGGKYQEYHRFL 670


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 195/401 (48%), Gaps = 5/401 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSD----GHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
           +YN++++ LC+         +   M +D    G  P+       ++  +R G+ D A  L
Sbjct: 169 SYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCL 228

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             +     ++ +   YN LL+         EA+ +F++  R   +PD  T+N L+  L +
Sbjct: 229 FDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCK 288

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G   +A + F  M   G  PD   Y TL+ G      + + H+LL +V  ++   PD  
Sbjct: 289 NGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL-DVMVRNGTQPDHY 347

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
            +  +I  Y K G +D+A   +++M   G+ P+ VT+  ++D   +VG +  A    +R+
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +S G  P+ V F +LI G C   + ++  +L  EM G+ + PN   F  L+N LCKE  +
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
             A+     +   D+      Y  +IDG+C  G VDEA  ++  M     KP++VT+  +
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           I G+C  GR+ +A S+F +M   G  P  +  ++++  L +
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQ 568



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 180/378 (47%), Gaps = 9/378 (2%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM-FKEYFRLY 256
           +  C RAG  D A   L +      T     ++ LL  L       +A+ +  +    L 
Sbjct: 103 IGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALG 162

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS----FGCSPDIVTYNTLISGLCRVNEV 312
             P+ +++NIL++GL      ++A    + M +     GC PD+V+Y T+I+GL R  ++
Sbjct: 163 CTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQL 222

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
            + + L  E+      SP+ +TY  ++ GYC  GK  +A GI+ +M   G++P  VT+N 
Sbjct: 223 DKAYCLFDEM-LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNT 281

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L+    K G  + A  + + M+  G+ PD   + +L+ GY   G L Q  +L D M    
Sbjct: 282 LMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNG 341

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             P+ Y F ILI A  K   +++A     +++   L P    Y  V+D  C+ G VD+A 
Sbjct: 342 TQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAM 401

Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
                +  +   P+ V F  LI G C   +  +A  +  +M+  G  P+ I  N+L++ L
Sbjct: 402 SQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHL 461

Query: 553 LKGGMPNEA---FRIMQR 567
            K GM   A   F +M R
Sbjct: 462 CKEGMVTRAKNIFDLMVR 479



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 204/448 (45%), Gaps = 18/448 (4%)

Query: 138 LGLKFLEFSRV-NLSLNHSFKTYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           L L F    RV          T++ +++ LC +    D++ +    M + G  PN+    
Sbjct: 112 LDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNA---- 167

Query: 196 FFVSSCIRAGKCDAAKG---------LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
            F  + +  G CD  +          +++    G        Y +++N L+++   D+A 
Sbjct: 168 -FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAY 226

Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
            +F E       P+  T+N L+ G    G+ K+A   F  M   G  PD+VTYNTL+  L
Sbjct: 227 CLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYL 286

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+        ++   +  K    PD   Y +++ GY   G + +   + + M   G +P 
Sbjct: 287 CKNGRSMEARKVFDSM-VKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPD 345

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
              FN+LI  + K G +  A     +M   G  P++VT+ +++D  CR G+++  +   D
Sbjct: 346 HYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFD 405

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
            +  + L+PN   F  LI+ LC  ++ + A     ++    + P    +N +++  CK G
Sbjct: 406 RLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEG 465

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            V  A  I   M     + D +T+T LI G+C+ G++ EA  +   M+  G  P+++T N
Sbjct: 466 MVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYN 525

Query: 547 SLISCLLKGGMPNEAFRIM-QRASEDQN 573
           ++I+   K G   +A  +  Q AS+  N
Sbjct: 526 TIINGYCKNGRIEDACSLFRQMASKGVN 553



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 187/404 (46%), Gaps = 36/404 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +M  LC+ G     + VFD M   GH P+S +    +          A +G L Q 
Sbjct: 278 TYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGY-------ATEGYLVQM 330

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                       + LL+ +V+                  +QPD + FNILI   ++ G V
Sbjct: 331 ------------HQLLDVMVRNG----------------TQPDHYIFNILIGAYAKHGMV 362

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  P+IVTY T++  LCRV +V         +      +P+ V + +
Sbjct: 363 DEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL-ISEGLTPNGVVFRT 421

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G C   K DKA  +  EM   GI P+ + FN L++   K G +  A+ + + M+   
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              DV+T+++LIDGYC +G++++  KL + M    + PN  T+  +IN  CK  R+ DA 
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
              +Q+    + P   +Y+ ++ G  +   +  A  +   M +   K    T+ I++ G 
Sbjct: 542 SLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGL 601

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           C      +A+ +F+ +  I     + T N +I  LLKGG  +EA
Sbjct: 602 CQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEA 645



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 175/370 (47%), Gaps = 46/370 (12%)

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
           T S F  NS L+A+ +++ A  A+ +F    R     D  T++I+I   SR G +  AF 
Sbjct: 63  TTSIFDLNSALSAVARESPA-VALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFA 117

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCR--------------------------VNEVARG- 315
               +   G +   +T++ L+ GLC                            N + +G 
Sbjct: 118 ALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGL 177

Query: 316 -------------HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                        H ++ +   +    PDVV+YT+VI+G  + G++DKA  +++EM   G
Sbjct: 178 CDENRSQQALHLLHTMMAD-DTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQG 236

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           + P+ +T+N L+ G+   G    A  +  +M   G  PDVVT+++L+   C+NG+  +  
Sbjct: 237 MSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEAR 296

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
           K+ D M  K   P+   +  L++    E  L    + L  +  N   P  +++N +I  +
Sbjct: 297 KVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAY 356

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
            K G VDEA +  ++M ++   P+ VT+  ++   C  G++ +A+S F++++  G  P+ 
Sbjct: 357 AKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNG 416

Query: 543 ITVNSLISCL 552
           +   +LI  L
Sbjct: 417 VVFRTLIHGL 426



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 166/360 (46%), Gaps = 2/360 (0%)

Query: 142 FLEFSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
            L FS++    L+ +  TY  VM +LC +G  D     FD + S+G  PN  +    +  
Sbjct: 366 MLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHG 425

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
                K D A+ L  +     +  +T  +N+LLN L K+     A  +F    R+  Q D
Sbjct: 426 LCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCD 485

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+  LI G    G+V +A +    M   G  P+ VTYNT+I+G C+   +     L +
Sbjct: 486 VITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFR 545

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
           ++  K   +P +V Y++++ G  +  ++  A  +Y  M  CGIK    T+N+++ G  + 
Sbjct: 546 QMASKG-VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQN 604

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
                A  M   +    +     TF+ +ID   + G+ ++   L   +  + L PNV T+
Sbjct: 605 NCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 664

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            +++ +L ++  L +       L+ N       M N ++    + G V +A V +++++E
Sbjct: 665 WLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDE 724


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 171/334 (51%), Gaps = 2/334 (0%)

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDI 296
           K  N DEA+ +F+   R+   P    F +L+  + R+     A      M  S G   D 
Sbjct: 53  KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           +T N +I+ LCR+  VA G  +L  + FK    P V+T T++I+G C  G + +A G+ +
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTM-FKLGLEPTVMTLTTLINGLCVQGNVAQAVGLAD 171

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
            M          T+ VLI+G  K G+ ++A     +M    + P+VV +S+++DG C++G
Sbjct: 172 HMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDG 231

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
            +++ L LC EM GK + PN+ T+  LI  LC   R  +A   L ++    + P   M N
Sbjct: 232 LVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLN 291

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++D FCK G V +A  ++  M      PD  T+  LI  +C++ +M EA+ +F+ M+  
Sbjct: 292 ILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSR 351

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G  PD +   SLI    K    N+A  +++  S+
Sbjct: 352 GRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSK 385



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 202/429 (47%), Gaps = 7/429 (1%)

Query: 153 NHSFKTYNLV-MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF---VSSCIRAGKCD 208
           +HS  T  L+ MR+LC  G   ++    D  +    +   P ++ F   + + +R     
Sbjct: 34  SHSNGTQLLISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYT 93

Query: 209 AAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            A  L+   F    +   T   N ++N L +         +    F+L  +P   T   L
Sbjct: 94  TAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTL 153

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL   G V +A      M       D+ TY  LI+GLC+  +       L++++ +  
Sbjct: 154 INGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKME-ERN 212

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           + P+VV Y++++ G CK G + +A  + +EMN  G++P+ VT+  LI G    G    A 
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAG 272

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + + M+  G  PD+   + L+D +C+ G++ Q   +   M      P+V+T+  LI+  
Sbjct: 273 SLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIY 332

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C +N++N+A R    +     +P   ++  +I G+CK  N+++A  ++ EM +    PD 
Sbjct: 333 CLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDV 392

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            T+T LI G C  GR + A  +F  M + G  P+  T   ++  L K  + +EA   + +
Sbjct: 393 ATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVS-LAK 451

Query: 568 ASEDQNLQL 576
           A E  NL L
Sbjct: 452 AMEKSNLDL 460



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 194/404 (48%), Gaps = 1/404 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L L  +  T   ++  LC  G       + D+M    +  +       ++   + G   A
Sbjct: 141 LGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLA 200

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A G L +        +  +Y+++++ L K     EA+ +  E      +P+  T+  LIQ
Sbjct: 201 AVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQ 260

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL   G  K+A     +M   G  PD+   N L+   C+  +V +   ++  +    E  
Sbjct: 261 GLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGE-G 319

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PDV TY S+I  YC   KM++A  +++ M S G  P  V F  LI G+ K  N+  A ++
Sbjct: 320 PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHL 379

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            E M   G++PDV T+++LI G+C+ G+     +L   M      PN+ T  ++++ LCK
Sbjct: 380 LEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCK 439

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           EN L++A    K ++ ++L     +Y+ ++DG C AG ++ A  + + +  K  + +   
Sbjct: 440 ENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYI 499

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           +TI+I G C +G + +A  +   M   GC P++ T N  +  LL
Sbjct: 500 YTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLL 543



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 183/397 (46%), Gaps = 5/397 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVV--FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           TY +++  LC+ G  D++  V     M      PN  +    +    + G    A  L S
Sbjct: 184 TYGVLINGLCKTG--DTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCS 241

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +     V  +   Y  L+  L       EA  +  E  ++  +PD    NIL+    + G
Sbjct: 242 EMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEG 301

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           +V +A      M   G  PD+ TYN+LI   C  N++     +   +  +    PD+V +
Sbjct: 302 KVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRL-PDIVVF 360

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
           TS+I G+CK   ++KA  +  EM+  G  P   T+  LI GF + G  ++A+ +   M  
Sbjct: 361 TSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHK 420

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
           +G +P++ T + ++DG C+   L++ + L   M+  NL  N+  ++IL++ +C   +LN 
Sbjct: 421 YGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNA 480

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A      L    L    ++Y  +I G CK G++D+A  ++  MEE  C P+  T+ + + 
Sbjct: 481 AWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQ 540

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           G   K  +  +I     M   G + D  T   +I+ L
Sbjct: 541 GLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYL 577



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 172/348 (49%), Gaps = 6/348 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
             P  +T++T     L+N L  Q N  +AV +     +++   D +T+ +LI GL + G+
Sbjct: 143 LEPTVMTLTT-----LINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGD 197

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
              A  +   M      P++V Y+T++ GLC+   V+    L  E+  K    P++VTY 
Sbjct: 198 TLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKG-VRPNLVTYA 256

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I G C  G+  +A  + +EM   G++P     N+L+D F K G ++ A+ +   M+  
Sbjct: 257 CLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILT 316

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PDV T++SLI  YC   ++N+ +++   M  +   P++  FT LI+  CK+  +N A
Sbjct: 317 GEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKA 376

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L+++     VP    +  +I GFC+AG    A  +   M +    P+  T  +++ G
Sbjct: 377 MHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDG 436

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            C +  + EA+S+   M +     + +  + L+  +   G  N A+ +
Sbjct: 437 LCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWEL 484



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 132/337 (39%), Gaps = 34/337 (10%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +++ LC  G       + D M   G  P+  M+   V +  + GK   AK ++   
Sbjct: 254 TYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFM 313

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                    F YNSL++    QN  +EA+ +F         PD   F  LI G  +   +
Sbjct: 314 ILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNI 373

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL------------------- 318
            KA     +M   G  PD+ T+ TLI G C+        EL                   
Sbjct: 374 NKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVI 433

Query: 319 ---------------LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
                          L +   KS    ++V Y+ ++ G C  GK++ A  +++ +   G+
Sbjct: 434 LDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGL 493

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
           + +   + ++I G  K G++  AE +   M   G LP+  T++  + G     ++ + +K
Sbjct: 494 QINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIK 553

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
               M+ K  S +  T   +IN L         R FL
Sbjct: 554 YLTIMRDKGFSVDAATTEFIINYLSTNEGDTKIREFL 590


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 181/368 (49%), Gaps = 18/368 (4%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNAD----------EAVYMFKEYFRLYSQPDTWTFNI 266
           F+P  VT +T ++   L   + +  A           EAV +F +   +   P   TFN 
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI GL   G V +A      M   G   D+VTY T+++G+C++ +      LL +++ ++
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ET 290

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PDVV Y+++I   CK G    A  +++EM   GI P+  T+N +IDGF   G    A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + +   M+     PDV+TF++LI    + G+L +  KLCDEM  + + P+  T+  +I  
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK NR +DA+     +   D+V     +N +ID +C+A  VDE   ++ E+  +    +
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FR 563
             T+  LI G C    +  A  +F +M+  G  PD IT N L+    +     EA   F 
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526

Query: 564 IMQRASED 571
           ++Q +  D
Sbjct: 527 VIQMSKID 534



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 183/386 (47%), Gaps = 20/386 (5%)

Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
           FDYM        +      +   +R  + D A  L  +     + ++ + +N L+     
Sbjct: 94  FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRIGEVKKAFEFFYDMG------- 288
            +    ++  F +  +L  QPD  TFN L+ GL    RI E    F +  + G       
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVAL 213

Query: 289 -----SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
                  G +P ++T+NTLI+GLC    V     L+ ++  K     DVVTY ++++G C
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMC 272

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K+G    A  + ++M    IKP  V ++ +ID   K G+   A+Y+   ML  G  P+V 
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T++ +IDG+C  G+ +   +L  +M  + ++P+V TF  LI+A  KE +L +A +   ++
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
               + P    YN +I GFCK    D+A      M +    PD VTF  +I  +C   R+
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIIDVYCRAKRV 448

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLI 549
            E + +  ++ R G   +  T N+LI
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLI 474



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 201/408 (49%), Gaps = 6/408 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  +C+MG   S   +   M      P+  +    +    + G    A+ L S+ 
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + F YN +++         +A  + ++       PD  TFN LI    + G++
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M      PD VTYN++I G C+ N       +     F    SPDVVT+ +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM-----FDLMASPDVVTFNT 437

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YC+  ++D+   +  E++  G+  +  T+N LI GF +V N+ +A+ + + M+S G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +T + L+ G+C N +L + L+L + ++   +  +   + I+I+ +CK +++++A 
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L  + + P    YN +I GFC    + +ANV+  +M++   +PD  T+  LI G 
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
              G + ++I + ++M   G + D  T+  +++ L+  G  +++F  M
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFSDM 664



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 216/486 (44%), Gaps = 58/486 (11%)

Query: 134 DNPKLGLKFLEFSRVN-LSLNHSFKTYNLVMRSLC----------------EMGLHDSVQ 176
           D  KL      F ++  L       T+N ++  LC                E G  ++V 
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV- 211

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            +FD M   G  P        ++     G+   A  L+++     + +    Y +++N +
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K  +   A+ +  +    + +PD   ++ +I  L + G    A   F +M   G +P++
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            TYN +I G C     +    LL+++  + E +PDV+T+ ++IS   K GK+ +A  + +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFNALISASVKEGKLFEAEKLCD 390

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EM    I P  VT+N +I GF K      A++M + M S    PDVVTF+++ID YCR  
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAK 446

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM-- 474
           ++++G++L  E+  + L  N  T+  LI+  C+ + LN A+   +++  + + P      
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 475 ---------------------------------YNPVIDGFCKAGNVDEANVIVAEMEEK 501
                                            YN +I G CK   VDEA  +   +   
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
             +PD  T+ ++I G C K  + +A  +F+KM   G  PD+ T N+LI   LK G  +++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 562 FRIMQR 567
             ++  
Sbjct: 627 IELISE 632



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 176/354 (49%), Gaps = 18/354 (5%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N ++   V+ N  D A+ ++++        + ++FNILI+      ++  +   F  +  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 290 FGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSE-----------FSPDVVTY 335
            G  PD+VT+NTL+ GLC   R++E       + E  F               +P V+T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I+G C  G++ +A  + N+M   G+    VT+  +++G  K+G+  SA  +  +M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               PDVV +S++ID  C++G  +    L  EM  K ++PNV+T+  +I+  C   R +D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+R L+ +   ++ P    +N +I    K G + EA  +  EM  +   PD VT+  +I 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           G C   R  +A  +F+ M     +PD +T N++I    +    +E  ++++  S
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 27/281 (9%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS----VISGYCKLGKMDK 350
           DI   NT  SG  R+N     H  + E   KS  S   VT+      + SG      +D 
Sbjct: 31  DIEKKNTK-SGGVRLNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDD 89

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP-DVVTFSSLI 409
           A   ++ M       +AV  N +I  F ++ N         R +    +P ++ +F+ LI
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRM-NRPDVAISLYRKMEIRRIPLNIYSFNILI 148

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
             +C   +L+  L    ++      P+V TF  L++ LC E+R+++A        +  +V
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL-----FGYMV 203

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
              F+               EA  +  +M E    P  +TF  LI G C++GR++EA ++
Sbjct: 204 ETGFL---------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL 248

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            NKM+  G   D +T  ++++ + K G    A  ++ +  E
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 203/415 (48%), Gaps = 4/415 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++  LC+ G+    +     M      PN       +    +A   + A   L +  
Sbjct: 67  YNNLISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLREME 125

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +   Y+S++ +  K  N  +A+ +F E      +PD   FN+L+ GL R  ++ 
Sbjct: 126 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIH 185

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A E F  M S GC PD+VTYNT+I+GLC+  ++     LL+ +K + + SP  VTYT++
Sbjct: 186 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMK-QEDVSPTFVTYTTL 244

Query: 339 ISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           I   CK  ++ +A  ++ +M    C     A +  +LI+G  K      A+ M + M   
Sbjct: 245 IDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGR 304

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P VVT+++L++G     +L   ++L   M  +  +PN++T+ ILI++LCK +++ +A
Sbjct: 305 GISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEA 364

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L  ++    VP   ++  ++    +AG +D+A  +  EM    C+    +  IL+ G
Sbjct: 365 FKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDG 424

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
              +G + EA     +M   G  PD  T + L+  L   G  ++A ++++    D
Sbjct: 425 ILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRD 479



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 190/416 (45%), Gaps = 4/416 (0%)

Query: 163 MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEV 222
           +R L E  L    + + + M+  G  P+       +    ++G        L +     +
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 223 TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFE 282
             +  +YN+L++ L K     EA    K   + +  P+  ++NI+I G  +   ++KA  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           F  +M   G  P    Y++++   C+   V++  ++  E+  K    PD+V +  ++SG 
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKG-CEPDIVNFNVLLSGL 178

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            +  K+ +A  ++  MNS G KP  VT+N +I G  K   +  A ++ ERM      P  
Sbjct: 179 WRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTF 238

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL--SPNVYTFTILINALCKENRLNDARRFL 460
           VT+++LID  C+  +L Q  ++ ++M       +   Y+  ILIN LCK  R  +A+   
Sbjct: 239 VTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMF 298

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           ++++   + P    YN +++G      + +A  +   M ++   P+  T+ ILI   C  
Sbjct: 299 QEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKT 358

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
            ++ EA  + + M   G  P       L+S L + G  ++AF + +  S     QL
Sbjct: 359 DQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQL 414



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 172/381 (45%), Gaps = 1/381 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++   C+    +        M   GH P        V S  + G    A  + ++ 
Sbjct: 100 SYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM 159

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +N LL+ L +     EA  +F+       +PD  T+N +I GL +  ++
Sbjct: 160 PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKL 219

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL-KEVKFKSEFSPDVVTYT 336
            +A      M     SP  VTY TLI  LC+   + + +E+  K  +     +    +  
Sbjct: 220 DEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVL 279

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            +I+G CK  +  +A  ++ EM   GI P+ VT+N L++G      +  A  +   ML  
Sbjct: 280 ILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQ 339

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P++ T+  LI   C+  Q+ +  KL   M+ K   P++  + +L++ L +  RL+DA
Sbjct: 340 VPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDA 399

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               K++   +        N ++DG  + G+VDEA   + +M +    PDK T+  L++G
Sbjct: 400 FELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVG 459

Query: 517 HCMKGRMVEAISIFNKMLRIG 537
            C +G+  +A  +  +++R G
Sbjct: 460 LCWQGKADQARKLVEELVRDG 480


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 193/407 (47%), Gaps = 1/407 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N ++   C+ G  ++       MR+ G   +       V+   RAG+ DAA+G+L   +
Sbjct: 204 WNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMK 263

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V  +   Y + +    + N  D+A  +++E  R+   PD  T + L+ GL R G   
Sbjct: 264 GDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFS 323

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A+  F +M   G +P+ VTY TLI  L +    +  H LL EV  +     D+V YTS+
Sbjct: 324 EAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVM-DLVMYTSL 382

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           +    K GK+D+   +++   S    P+ VT+ VLID   + GN+  AE M   M     
Sbjct: 383 MDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSV 442

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+VVTFSS+I+G  + G L +      +MK + + PNV T+  +++   K      A  
Sbjct: 443 HPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALD 502

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
              ++    +    F+ + +++G  K G ++EA  +  +M ++    D V +T LI G  
Sbjct: 503 LYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLF 562

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             G M  A  +  ++     +PD +  N  ++CL   G   EA  I+
Sbjct: 563 KMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 196/415 (47%), Gaps = 3/415 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
           T N  + +LC  G  +    + + M     +    ++ +   +    ++G  +AA     
Sbjct: 166 TVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQ 225

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           + R   V +    YN+L+  L +   AD A  M +       +P+  T+   I    R  
Sbjct: 226 RMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTN 285

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            V  AF  + +M   G  PD+VT + L+ GLCR    +  + L +E++ K   +P+ VTY
Sbjct: 286 AVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREME-KIGAAPNHVTY 344

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I    K  +  ++ G+  E+ S G+    V +  L+D  GK G +   + M    LS
Sbjct: 345 CTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALS 404

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
             + P+ VT++ LID  CR G ++   ++  EM+ K++ PNV TF+ +IN L K+  L  
Sbjct: 405 DNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGK 464

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A  +++++K   + P    Y  V+DGF K    + A  +  EM  +  + +K    +L+ 
Sbjct: 465 AADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVN 524

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G    G+M EA ++F  M + G   D +   +LI  L K G    AF++ Q  +E
Sbjct: 525 GLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTE 579



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 168/394 (42%), Gaps = 72/394 (18%)

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK-AFEFFYDMGSFG 291
           LN+++  + A  ++       R     DT ++N++I GL+  G     A     +M   G
Sbjct: 100 LNSILLSHCALRSLRPALALLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRG 159

Query: 292 CSPDIVTYNTLISGLCRVNEV----------ARGHE------------------------ 317
              D VT NT +  LCR  +V           RG E                        
Sbjct: 160 VPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEA 219

Query: 318 -LLKEVKFKSE-FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            L    + +++    DVV Y ++++G C+ G+ D A G+   M   G++P+ VT+   I 
Sbjct: 220 ALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIA 279

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
              +   +  A  + E M+  G LPDVVT S+L+DG CR G+ ++   L  EM+    +P
Sbjct: 280 ECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAP 339

Query: 436 NVYTFTILINALCKENRLNDARRFLKQ----------------LKW-------------- 465
           N  T+  LI++L K  R +++   L +                + W              
Sbjct: 340 NHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMF 399

Query: 466 -----NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
                ++  P    Y  +ID  C+AGNVD A  ++ EME+K   P+ VTF+ +I G   +
Sbjct: 400 HCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQ 459

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           G + +A     KM   G  P+ +T  +++    K
Sbjct: 460 GLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFK 493



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 4/284 (1%)

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           S D V+YN +ISGL            L     K     D VT  + +   C+ G+++ A 
Sbjct: 125 SADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAA 184

Query: 353 GIYNEMNSCG---IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
            +  EM   G    +   V +N L+DG+ K G+M +A    +RM + G   DVV +++L+
Sbjct: 185 ALA-EMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLV 243

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            G CR G+ +    + + MKG  + PNV T+T  I   C+ N ++DA    +++    ++
Sbjct: 244 AGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVL 303

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P     + ++DG C+AG   EA  +  EME+    P+ VT+  LI       R  E+  +
Sbjct: 304 PDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGL 363

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
             +++  G   D +   SL+  L K G  +E   +   A  D +
Sbjct: 364 LGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNH 407



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 74/169 (43%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S++ +  T++ ++  L + GL          M+  G  PN       +    +  + ++A
Sbjct: 441 SVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESA 500

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             L  +     V ++ F+ + L+N L K    +EA  +F++  +     D   +  LI G
Sbjct: 501 LDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDG 560

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           L ++G +  AF+   ++     SPD V YN  ++ LC + +      +L
Sbjct: 561 LFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 36/438 (8%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C  G  D+ + V D M+  G  PN      F+    R    + A  L     
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V +     ++L+  L +     EA  +F+E  ++ + P+  T+  LI  L++ G  K
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGK 326

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTL-----------------------------------I 303
           +      +M S G   D+VTY  L                                   I
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLI 386

Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
             LC+ + V    ++L E++ KS  SP+VVT++SVI+G+ K G +DKAT     M   GI
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKS-ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
            P+ VT+  LIDGF K     +A  +   ML  G   +     SL++G  +NG++ + + 
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMA 505

Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
           L  +  G  LS +   +T LI+ L K   +  A +F ++L   +++P   +YN  I+  C
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLC 565

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             G   EA  I+ EM     KPD+ T+  +I+ HC KG   +A+ + ++M      P+ I
Sbjct: 566 ILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 544 TVNSLISCLLKGGMPNEA 561
           T N+L++ L   G   +A
Sbjct: 626 TYNTLVAGLFGTGAVEKA 643



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 207/455 (45%), Gaps = 39/455 (8%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           S++ +  T++ V+    + GL D        M+  G  PN       +    +    DAA
Sbjct: 409 SISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAA 468

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
             +        V ++ F+ +SL+N L +    +EA+ +FK+        D   +  LI G
Sbjct: 469 LEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDG 528

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
           L + G++  AF+F  ++      PD V YN  I+ LC + +      +L E++      P
Sbjct: 529 LFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMR-NMGLKP 587

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
           D  TY ++I  +C+ G+  KA  + +EM    IKP+ +T+N L+ G    G +  A+Y+ 
Sbjct: 588 DQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLL 647

Query: 391 ERMLSFGYLP-----------------------------------DVVTFSSLIDGYCRN 415
             M+S G+ P                                   D+  +++L+   C +
Sbjct: 648 NEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G   +   + +EM G  ++P+  TF  LI   CK + L++A     Q+   ++ P    +
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATF 767

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N ++ G    G + EA  ++ EME+   +P+ +T+ IL+ GH  +   VEA+ ++ +M+ 
Sbjct: 768 NTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVG 827

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEA---FRIMQR 567
            G  P   T N+LIS   K GM  +A   F+ MQ+
Sbjct: 828 KGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 193/412 (46%), Gaps = 7/412 (1%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++ +L +   H     V   M   G   +   +   ++   R G+ DAA  L    R
Sbjct: 106 YNILLAALSD---HAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--R 160

Query: 219 PGEV-TMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            G +  +    +N+L+    +  +   A+ +           D   +N L+ G  R G+V
Sbjct: 161 GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQV 220

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A      M   G  P++ TY   I   CR   V    +L  E   ++    DVVT ++
Sbjct: 221 DAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLY-EGMVRNGVLLDVVTLSA 279

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +++G C+ G+  +A  ++ EM+  G  P+ VT+  LID   K G       +   M+S G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            + D+VT+++L+D   + G+ ++           NLS N  T+T+LI+ALCK + +++A 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAE 399

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L +++   + P    ++ VI+GF K G +D+A      M+E+   P+ VT+  LI G 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
                   A+ +++ ML  G   +   V+SL++ L + G   EA  + + AS
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 196/430 (45%), Gaps = 13/430 (3%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  +V    NH   TY  ++ SL + G    +  +   M S G + +       +   
Sbjct: 297 FREMDKVGAVPNHV--TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + GK D  K  L       ++++   Y  L++AL K +N DEA  +  E       P+ 
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVN----EVARGHE 317
            TF+ +I G  + G + KA E+   M   G +P++VTY TLI G  +       +   H+
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           +L E    ++F  D     S+++G  + GK+++A  ++ + +  G+    V +  LIDG 
Sbjct: 475 MLCEGVEVNKFIVD-----SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G+M +A    + ++    LPD V ++  I+  C  G+  +   +  EM+   L P+ 
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQ 589

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  +I + C++     A + L ++K + + P    YN ++ G    G V++A  ++ E
Sbjct: 590 STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE 649

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAI-SIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           M      P  +T    ++  C + R ++ I  I   M+  G   D    N+L+  L   G
Sbjct: 650 MVSAGFSPSSLTHR-RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHG 708

Query: 557 MPNEAFRIMQ 566
           M  +A  +++
Sbjct: 709 MTRKATVVLE 718



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 165/378 (43%), Gaps = 1/378 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+ +  LC +G     + +   MR+ G  P+       + S  R G+   A  LL + +
Sbjct: 557 YNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +   YN+L+  L      ++A Y+  E       P + T   ++Q  S+   + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
              +    M + G   DI  YNTL+  LC      +   +L+E+   S  +PD +T+ ++
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM-LGSGIAPDTITFNAL 735

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+CK   +D A   Y +M    I P+  TFN L+ G   VG +  A  +   M   G 
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P+ +T+  L+ G+ +     + ++L  EM GK   P V T+  LI+   K   +  A+ 
Sbjct: 796 EPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKE 855

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K ++   + P    Y+ ++ G+ +  N  E    + +M+EK   P K T + +     
Sbjct: 856 LFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFS 915

Query: 519 MKGRMVEAISIFNKMLRI 536
             G   +A  +   + R+
Sbjct: 916 KPGMTWQAQRLLKNLYRV 933



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 192/428 (44%), Gaps = 9/428 (2%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F + S   LSL+H    Y  ++  L + G   +       +     LP++ +   F++  
Sbjct: 507 FKDASGSGLSLDHV--NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              GK   AK +L++ R   +      YN+++ +  ++    +A+ +  E      +P+ 
Sbjct: 565 CILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHEL 318
            T+N L+ GL   G V+KA     +M S G SP  +T+  ++       R++ +   HE 
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +      +    D+  Y +++   C  G   KAT +  EM   GI P  +TFN LI G  
Sbjct: 685 M----MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHC 740

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K  ++ +A     +ML     P++ TF++L+ G    G++ +   +  EM+   L PN  
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ IL+    K++   +A R   ++     VPK   YN +I  F KAG + +A  +  +M
Sbjct: 801 TYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
           +++   P   T+ IL+ G        E       M   G +P   T++ +     K GM 
Sbjct: 861 QKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920

Query: 559 NEAFRIMQ 566
            +A R+++
Sbjct: 921 WQAQRLLK 928



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 154/368 (41%), Gaps = 75/368 (20%)

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
           S+P T  +NIL+  LS   +   A     +M   G   D VT NTL++GLCR  +V    
Sbjct: 99  SRPTTVAYNILLAALS---DHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
            L    +     + DV+ + ++I+GYC++G    A  + + M + G+    V +N L+ G
Sbjct: 156 ALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213

Query: 377 FGKVGNMVSAE------------------------YMR-----------ERMLSFGYLPD 401
           F + G + +A                         Y R           E M+  G L D
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR--------- 452
           VVT S+L+ G CR+G+ ++   L  EM      PN  T+  LI++L K  R         
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 453 -------LNDARRFLKQLKW-------------------NDLVPKPFMYNPVIDGFCKAG 486
                  + D   +   + W                   ++L      Y  +ID  CKA 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAH 393

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           NVDEA  ++ EMEEK   P+ VTF+ +I G   +G + +A      M   G  P+ +T  
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 547 SLISCLLK 554
           +LI    K
Sbjct: 454 TLIDGFFK 461



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 141/284 (49%), Gaps = 8/284 (2%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P  V YN L++ L   ++ A    +L E+  K     D VT  ++++G C+ G++D A  
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEM-CKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 354 IYNEMNSCGIKP-SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           + +     GI     + +N LI G+ +VG+  +A  + +RM + G   DVV +++L+ G+
Sbjct: 157 LADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           CR GQ++    + D MK   + PNV T+T  I   C+   + +A    + +  N ++   
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
              + ++ G C+ G   EA  +  EM++    P+ VT+  LI      GR  E +S+  +
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           M+  G   D +T  +L+  L K G  +E    ++ A  D NL L
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD-NLSL 377


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 177/360 (49%), Gaps = 1/360 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++   C+ G  D    ++  M  +G  PN       +   I     D A  LL
Sbjct: 435 SINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALL 494

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +   V+ + + YN L+N +   +   E   M K +      P   T+N +I G  + 
Sbjct: 495 DEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKA 554

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +  AF  +  M   G  P+I+TY + I G CR        ++L +V+ +    PD+V 
Sbjct: 555 GMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR-RRGLQPDIVA 613

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y ++I+G+C+ G M  A  +   +   G+ P+ V +N LI G+  +  M       E M+
Sbjct: 614 YNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMI 673

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G + D  T+++LIDG+ ++G +   L+L  EM  K   P+ +TFT L + LC+   ++
Sbjct: 674 KGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDID 733

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A++ L++++  D+ P  F+YN +I+G+ +   + EA  +  EM     +PD  T+ IL+
Sbjct: 734 GAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 190/409 (46%), Gaps = 2/409 (0%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + Y L + +LC++G       +   M+  G           V   ++ G+ + A  +  +
Sbjct: 228 RVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDE 287

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R     M   +  +L+     +     A+ +FKE  +    P    + +LI+G  ++G 
Sbjct: 288 MRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGM 347

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
            +KA+E    M   G  P     + ++ GL           L +E+       PDV TY 
Sbjct: 348 TQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA--DSGLPDVFTYN 405

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I  +C+  K+ +A  +++ M   G+KPS  T+N L+ G+ K G M  A  +   M   
Sbjct: 406 NLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPME 465

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+ P+VVT+ +L+ GY      +    L DEMK   +S N YT+ +LIN +C  +R+ + 
Sbjct: 466 GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEV 525

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              LK       +P    YN +I+GF KAG +  A  +  +M EK   P+ +T+T  I G
Sbjct: 526 DGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDG 585

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +C  G    A+ + N + R G  PD +  N+LI+   + G  + A +++
Sbjct: 586 YCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL 634



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 4/406 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           +LV++ L           +F+ M +D  LP+       +    +A K   A  L  + + 
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEM-ADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKK 429

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
             V  S   YNSLL    K+   DEAV ++ E      +P+  T+  L++G     +   
Sbjct: 430 AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDN 489

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE-FSPDVVTYTSV 338
           A+    +M   G S +  TYN LI+G+C V+ V     +LK   F SE F P ++TY S+
Sbjct: 490 AYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKS--FMSEGFIPTMMTYNSI 547

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+G+ K G M  A  +Y +M   G+ P+ +T+   IDG+ + G    A  M   +   G 
Sbjct: 548 INGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGL 607

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD+V +++LI+G+C+ G ++  L+L   +    L+PN   +  LI      N + +  +
Sbjct: 608 QPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSK 667

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
           F + +    +V     Y  +IDGF K GNV  A  + +EM  K   PD  TFT L  G C
Sbjct: 668 FYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLC 727

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             G +  A  +  +M R+   P+    N LI+  L+     EAFR+
Sbjct: 728 RSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRL 773



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 190/398 (47%), Gaps = 11/398 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TYN ++   C+         +FD M+  G  P+       +    + G  D A  L S+ 
Sbjct: 403 TYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEM 462

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P  VT     Y +L+   + + + D A  +  E  +     + +T+N+LI G+ 
Sbjct: 463 PMEGFKPNVVT-----YITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGIC 517

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            +  V +         S G  P ++TYN++I+G  +   +     + ++++ K    P++
Sbjct: 518 MVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG-LPPNI 576

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TYTS I GYC+ G  D A  + N++   G++P  V +N LI+GF + GNM  A  +   
Sbjct: 577 ITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVI 636

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           +L  G  P+ V ++SLI GY     + +  K  + M    +  +  T+T LI+   K+  
Sbjct: 637 LLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGN 696

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A     ++     +P  F +  +  G C++G++D A  ++ EM     +P+   + +
Sbjct: 697 VAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNM 756

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           LI G+    ++ EA  + ++ML +G  PDD T + L+S
Sbjct: 757 LINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 180/394 (45%), Gaps = 2/394 (0%)

Query: 177 VVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNAL 236
            +F  MR  G+  ++ M +  +S+C++ G  + A  L  +    E+     +Y   + AL
Sbjct: 178 ALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITAL 237

Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
            K  +   A+ M +E   +      +T+  ++  L + G +++A     +M   G   D+
Sbjct: 238 CKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDV 297

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           +   TL+ G C   EV     L KE   K    P  V Y  +I G  ++G   KA  +  
Sbjct: 298 IVATTLMRGYCLRQEVGNALNLFKET-LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCR 356

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           +M   G+ PS    ++++ G         A  + E M   G LPDV T+++LI  +C+  
Sbjct: 357 QMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAH 415

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           +L + L L D MK   + P++ T+  L+   CK+  +++A +   ++      P    Y 
Sbjct: 416 KLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYI 475

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            ++ G+    + D A  ++ EM++     +  T+ +LI G CM  R+ E   +    +  
Sbjct: 476 TLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSE 535

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           G  P  +T NS+I+  +K GM   AF + Q+  E
Sbjct: 536 GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMRE 569



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M++ G +PD+ + + L+    R       L L  EM+G+    + + F  L++A  KE 
Sbjct: 147 HMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEG 206

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
              DA R   ++   ++ P   +Y   I   CK G+   A  ++ EM+E        T+ 
Sbjct: 207 MHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYR 266

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            ++      GRM EA+ + ++M   G   D I   +L+
Sbjct: 267 TMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLM 304


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 178/359 (49%), Gaps = 2/359 (0%)

Query: 204 AGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           AG   +A  +L++  + G+  +      +L+N   K  +  EA  +F E   L   P+  
Sbjct: 15  AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+  L+ G    G+ +K F  F +M   G  P++ TYN LI   CR  E  R   L  E+
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +     +VV+Y ++I+G C+ GK+  A  + + M + G +PS +TFN+L+DG+GK G 
Sbjct: 135 PVRG-IVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGK 193

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M +A     +M + G+ P  VT++ LI G+CR   + +  +   +MK + L P   T+TI
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI++  +EN +  A   L  ++   L      Y  ++   C  GN+ +A  +   M EK 
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +P  V + ++I G+  +G   +A+ +  +M + G  P+  +    I  L K     EA
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEA 372



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 190/387 (49%), Gaps = 12/387 (3%)

Query: 156 FKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + T    +R LC  G +  ++ ++    +S     +       V+ C + G    A+ + 
Sbjct: 2   WGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVF 61

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            +       P EVT     Y +L++        ++   +F+E  R   +P+ +T+N LI 
Sbjct: 62  DEMPLLGLAPNEVT-----YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIG 116

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              R GE ++A   F +M   G   ++V+YNTLI+GLCR  ++    +LL  ++ +    
Sbjct: 117 EWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGT-R 175

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P ++T+  ++ GY K GKM  A   +N+M + G +PSAVT+N+LI GF +  +M  A   
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  P  VT++ LID + R   + +  ++   M+   L  + +T+ +L+ ALC 
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E  + DAR+  + +    + P   +Y+ +I G+ + G+  +A  ++ EM +K   P+  +
Sbjct: 296 EGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSAS 355

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRI 536
           + + I   C   +  EA ++ + M  I
Sbjct: 356 YGLTIRVLCKDDKCQEAEALLDDMETI 382



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 156/306 (50%), Gaps = 1/306 (0%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D      L+ G  + G+V +A   F +M   G +P+ VTY  L+ G     +  +G  L 
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E++ +    P++ TY  +I  +C+ G+ ++A  +++EM   GI  + V++N LI G  +
Sbjct: 97  EEMR-RGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCR 155

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +  A  + + M + G  P ++TF+ L+DGY + G+++  L   ++MK     P+  T
Sbjct: 156 HGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVT 215

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + +LI   C+   +  A R L  +K   L P    Y  +ID F +  ++ +A  I+A ME
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           +   + D  T+ +L+   CM+G M +A  +F  M   G  P ++  + +I    + G   
Sbjct: 276 KAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSY 335

Query: 560 EAFRIM 565
           +A +++
Sbjct: 336 KALKLI 341



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 3/311 (0%)

Query: 262 W-TFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELL 319
           W T    ++ L   G+V+ A          G  + D+     L++G C+  +VA    + 
Sbjct: 2   WGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVF 61

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+      +P+ VTYT+++ GY   G+ +K   ++ EM   G++P+  T+N LI  + +
Sbjct: 62  DEMPLLG-LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G    A  + + M   G + +VV++++LI G CR+G+L    KL D M+ +   P++ T
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F +L++   K  ++++A  F  Q+K     P    YN +I GFC+A ++  AN  +++M+
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E+  +P KVT+TILI     +  M +A  I   M + G   D  T   L+  L   G   
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMK 300

Query: 560 EAFRIMQRASE 570
           +A ++ Q   E
Sbjct: 301 DARKLFQSMGE 311



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 174/391 (44%), Gaps = 25/391 (6%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  +M      G  +    +F+ MR  G  PN       +    R G+ + A+ L  + 
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN+L+  L +     +A  +        ++P   TFN+L+ G  + G++
Sbjct: 135 PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM 194

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A  FF  M + G  P  VTYN LI+G CR  ++ R +  L ++K +    P  VTYT 
Sbjct: 195 SNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG-LEPTKVTYTI 253

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  + +   M KA  I   M   G++  A T+ VL+      GNM  A  + + M   G
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  V +  +I GY R G   + LKL  EM+ K L PN  ++ + I  LCK+++  +A 
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAE 373

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI--I 515
             L  ++              I  F  AG+    N I ++ + ++   DK T   L   +
Sbjct: 374 ALLDDME-------------TIRSF--AGH--HQNFIASKSDSQQKDEDKCTEHFLQNKV 416

Query: 516 GHCM-----KGRMVEAISIFNKMLRIGCAPD 541
           G  +     + + +E +S+ +K L +  AP+
Sbjct: 417 GQALESDSIRDKGLEIVSVHDKGLEVNSAPE 447


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 158/287 (55%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAM 197

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 198 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 257

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++MLS    PD++T+++LI G C+ G L Q   L DEM  K L P+ +T+T L
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 317

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 318 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T++I   C KG + +   +  +M R G AP  +T N L++
Sbjct: 378 KPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 424



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 203/416 (48%), Gaps = 28/416 (6%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N +  H+  +Y  ++  LC          +F   +S        +I+  VS   R G
Sbjct: 3   SPANSTFRHTLHSYCTMIHFLC-------THQMFSEAKS--------LIQVVVS---RKG 44

Query: 206 KCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-- 262
           K  A+    +     G      ++++ L+ A ++     +A+    E + L  +   W  
Sbjct: 45  KGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAI----ECYTLTREHKLWVP 100

Query: 263 --TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T   +++ L ++   K  + F+ D+   G    +  +N L+   C+  ++     +  
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 160

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  K    P VV+Y ++++GY +LG +D+   + + M + G++P   T++VLI+G  K 
Sbjct: 161 AIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKE 219

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             M  A  + + ML  G +P+ VTF++LIDG+C+NG+++  +++  +M  ++LSP++ T+
Sbjct: 220 SKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI  LCK+  L  A   + ++    L P  F Y  +IDG CK G++D A      M +
Sbjct: 280 NTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ 339

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           +  + D V +T LI G C +GR V+A  +  +ML +G  PD  T   +I+   K G
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKG 395



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 159/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 135 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 194

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK
Sbjct: 195 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LVPNGVTFTTLIDGHCK 253

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++  A  + + M   G  PD  T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 313

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 314 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 374 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 146/292 (50%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 135 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 194

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  + 
Sbjct: 195 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 254

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S   SPD++TYNTLI GLC+  ++ + H+L+ E+  K    PD  T
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG-LKPDKFT 313

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   ML
Sbjct: 314 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           S G  PD+ T++ +I+ +C+ G + +G KL  EM+    +P+V T+ +L+N 
Sbjct: 374 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 129/226 (57%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +CK G +  A  +++ +   G++PS V++N L++G+ ++G++     ++  ML+ G  PD
Sbjct: 146 FCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 205

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V T+S LI+G C+  +++   +L DEM  K L PN  TFT LI+  CK  R++ A    K
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q+    L P    YN +I G CK G++ +A+ ++ EM  K  KPDK T+T LI G C +G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 325

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +  A     +M++     DD+   +LIS L + G   +A ++++ 
Sbjct: 326 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 295 DIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           DI  ++ LI+       + +    + L +E K    F     T   V+    KL      
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFD----TCRKVLEHLMKLKYFKLV 120

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
            G Y ++  CG   S   FN+L+  F K G++  A+ + + +  +G  P VV++++L++G
Sbjct: 121 WGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG 180

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           Y R G L++G +L   M    + P+VYT+++LIN LCKE++++DA     ++    LVP 
Sbjct: 181 YIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPN 240

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              +  +IDG CK G VD A  I  +M  +   PD +T+  LI G C KG + +A  + +
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLID 300

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
           +M   G  PD  T  +LI    K G  + AF   +R  + +N++L
Sbjct: 301 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQ-ENIRL 344



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 70/155 (45%)

Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
           SL+    TYN ++  LC+ G       + D M   G  P+       +  C + G  D A
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTA 330

Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
                +     + +    Y +L++ L ++  + +A  M +E   +  +PD  T+ ++I  
Sbjct: 331 FEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINE 390

Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             + G+V K  +   +M   G +P +VTYN L++G
Sbjct: 391 FCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425


>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
 gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
          Length = 461

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 8/376 (2%)

Query: 198 VSSCIR----AGKCDAAKGLLSQFRPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
           ++ C+R    AG  D A   L + +    +  S   Y+ L+ AL      ++A+ + ++ 
Sbjct: 54  LNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQM 113

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
             +  + D  T++++I  L + G V KA      M S  C PD   Y+ +I  L +   V
Sbjct: 114 ESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRV 173

Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
               E+ KE   K   S  VVTY S++ G+ K  ++ +   ++  M   G  P   T+N+
Sbjct: 174 DEAVEIAKEADAKHCTS--VVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNI 231

Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
           L +G  + G    A  +  RM   G LPDVVTF+SLI+G   + + ++ + L  EM  + 
Sbjct: 232 LFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRG 291

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
             PN  T+TIL+  L +  R ++     ++L    L P  + YN V+   CKAG +D+A+
Sbjct: 292 CDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAH 351

Query: 493 VIVAEMEEKRCK-PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
            +   M    C  P+ +T+  LI G C+K  +  A+ + + M + GCAPD     ++++ 
Sbjct: 352 RLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAA 411

Query: 552 LLKGGMPNEAFRIMQR 567
             K G  +EAF +++R
Sbjct: 412 FCKQGRIDEAFELLER 427



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 188/402 (46%), Gaps = 7/402 (1%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS-PMIEFFVSSCIRAGKCDAAKGL 213
           S +  N  +R LC+ G  D         ++   L  S       V++   A + + A  L
Sbjct: 50  SIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALEL 109

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L Q     +      Y+ ++++L K    D+A  + +        PD   ++ +I+ LS+
Sbjct: 110 LEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSK 169

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
            G V +A E   +  +  C+  +VTYN+L+ G  +   + RG ++   +  ++  SPD+ 
Sbjct: 170 TGRVDEAVEIAKEADAKHCT-SVVTYNSLVLGFLKARRLKRGIKVFTRMA-RTGPSPDIY 227

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY  +  G  + G    A  +   MN  G+ P  VTFN LI+G  +      A  + + M
Sbjct: 228 TYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEM 287

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +S G  P+ +T++ L+    RN + ++ ++L   +  + L+PNVYT+  +++ALCK  RL
Sbjct: 288 VSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRL 347

Query: 454 NDARRFLKQLKWNDLVP-KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           + A R    +  +D  P     Y  +I G C    ++ A +++  M ++ C PD   +  
Sbjct: 348 DQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGT 407

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           ++   C +GR+ EA  +  +M   G   D +   +L+  L K
Sbjct: 408 IVAAFCKQGRIDEAFELLERMPFAG---DKVMFRTLVRALCK 446



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 175/381 (45%), Gaps = 6/381 (1%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
            L+FL  ++ + SL  S  TY++++ +L     ++    + + M S G   +       +
Sbjct: 70  ALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQMESVGLEADKDTYSLII 129

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
            S  ++G  D AK L+ +           +Y+ ++  L K    DEAV + KE    +  
Sbjct: 130 HSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKHC- 188

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
               T+N L+ G  +   +K+  + F  M   G SPDI TYN L  GL R       ++L
Sbjct: 189 TSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKL 248

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L  +  +    PDVVT+ S+I+G  +  +  +A  +  EM S G  P+A+T+ +L+    
Sbjct: 249 LPRMN-QDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLA 307

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS-PNV 437
           +         + +R+L     P+V T+++++   C+ G+L+Q  +L   M   + + PN 
Sbjct: 308 RNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNA 367

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T+  LI+ LC +  L  A   L  +      P    Y  ++  FCK G +DEA  ++  
Sbjct: 368 ITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLER 427

Query: 498 MEEKRCKPDKVTFTILIIGHC 518
           M       DKV F  L+   C
Sbjct: 428 MP---FAGDKVMFRTLVRALC 445



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 155/329 (47%), Gaps = 5/329 (1%)

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDI 296
           +Q N    + + K+     S       N  ++GL + G V  A EF  +   SF     +
Sbjct: 28  EQGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASV 87

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
            TY+ L++ L          ELL++++       D  TY+ +I   CK G +DKA  +  
Sbjct: 88  STYSILVAALTAAKRNNDALELLEQME-SVGLEADKDTYSLIIHSLCKSGMVDKAKVLVE 146

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
            M S    P A  ++ +I+   K G +  A E  +E      +   VVT++SL+ G+ + 
Sbjct: 147 RMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKE--ADAKHCTSVVTYNSLVLGFLKA 204

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
            +L +G+K+   M     SP++YT+ IL   L +      A + L ++  + ++P    +
Sbjct: 205 RRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTF 264

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N +I+G  +      A  ++ EM  + C P+ +T+TIL+       R  E + +F ++L 
Sbjct: 265 NSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLD 324

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRI 564
              AP+  T N+++S L K G  ++A R+
Sbjct: 325 RKLAPNVYTYNTVMSALCKAGRLDQAHRL 353



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 2/231 (0%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMRERMLSFGYLP 400
           Y + G +     +  +M   G   S    N  + G  K GN+  A E++RE   SF    
Sbjct: 26  YSEQGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRA 85

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
            V T+S L+       + N  L+L ++M+   L  +  T++++I++LCK   ++ A+  +
Sbjct: 86  SVSTYSILVAALTAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLV 145

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           +++   + VP   +Y+PVI+   K G VDEA  I  E + K C    VT+  L++G    
Sbjct: 146 ERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKHC-TSVVTYNSLVLGFLKA 204

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            R+   I +F +M R G +PD  T N L   L + G+   A++++ R ++D
Sbjct: 205 RRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQD 255


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 212/430 (49%), Gaps = 5/430 (1%)

Query: 139 GLKFLE-FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
            L+F+E  +++ + +N     Y+ VM   CE+G  +  + + D +   G  PN       
Sbjct: 262 ALEFVEEMTKMGVEVN--LVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLL 319

Query: 198 VSSCIRAGKCDAAKGLLSQFRPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
           V         + A+G++ + R   ++ +   ++ +++N   +    ++A  +  E     
Sbjct: 320 VKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSR 379

Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
            Q + + +NI+I G  ++G + +A    ++M   G  PD  +YN+L+ G C+   + +  
Sbjct: 380 LQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAF 439

Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           E    +  ++ F+   +TY +++ G+C LG +D A  ++  M   GI P+ ++ + L+DG
Sbjct: 440 ETYNTM-LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDG 498

Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
           F K G    A  + +  L+ G   +  TF+++I+G C+  ++ +  +L D+MK     P+
Sbjct: 499 FFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPD 558

Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
           + T+  L +  CK   ++ A R L +L+     P    +N +I G   A    + N I+ 
Sbjct: 559 IITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF 618

Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           EM  +   P+ V +  LI G C +G +  A +++ +M+  G  P+    +SL+SC  + G
Sbjct: 619 EMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKG 678

Query: 557 MPNEAFRIMQ 566
             +EA  ++Q
Sbjct: 679 KFDEANLVLQ 688



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 206/445 (46%), Gaps = 37/445 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
           +YN ++   C+ GL +     ++ M  +G    +      +      G  D A  L    
Sbjct: 421 SYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLM 480

Query: 215 --SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
                 P E++ ST     LL+   K    ++A+ ++KE        +T TFN +I GL 
Sbjct: 481 LKKGIAPNEISCST-----LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLC 535

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +I  + +A E    M  + C PDI+TY TL SG C++ ++ R   +L E++    F+P +
Sbjct: 536 KIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE-NLGFAPTI 594

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             + S+I+G+    +  K   I  EM++ G+ P+ V +  LI G+ K G++ +A  +   
Sbjct: 595 EFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLE 654

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT------------- 439
           M+  G +P++   SSL+  + R G+ ++   +   + G ++ P++               
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID 714

Query: 440 -------------FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
                        + I+I  LCK  R+ DA+  L  LK    V   F Y+ +I G   +G
Sbjct: 715 TVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASG 774

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            VD A  +   M      P+ VT+  LI G C  G +  A+S+F K+   G +P+ IT N
Sbjct: 775 FVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYN 834

Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
           +LI    K G   EAF++ QR  E+
Sbjct: 835 TLIDKHCKDGYITEAFKLKQRMIEE 859



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 193/424 (45%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F     V    + S  +++L++R+L   G  D    VFD MR+ G   +       ++  
Sbjct: 159 FPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRL 218

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            + G   A   +  Q +        F    +  A  K      A+   +E  ++  + + 
Sbjct: 219 AQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNL 278

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             ++ ++ G   +G+   A      +   G SP+IVTY  L+ G C    +     +++E
Sbjct: 279 VAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQE 338

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++   +   D   + +VI+GYC++G+M+ A  + NEM    ++ +   +N++I+G+ K+G
Sbjct: 339 IRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLG 398

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            MV A  +   M   G  PD  +++SL+DGYC+ G +N+  +  + M     +    T+ 
Sbjct: 399 RMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYN 458

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            L+   C    ++DA R    +    + P     + ++DGF K+G  ++A  +  E   +
Sbjct: 459 ALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLAR 518

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
               +  TF  +I G C   RM EA  + +KM +  C PD IT  +L S   K G  + A
Sbjct: 519 GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRA 578

Query: 562 FRIM 565
            RI+
Sbjct: 579 SRIL 582



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 217/512 (42%), Gaps = 72/512 (14%)

Query: 137 KLGLKFLEFSRVNLSLNHSFK----TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSP 192
           K GL    F   N  L + F     TYN +++  C +G  D    ++  M   G  PN  
Sbjct: 431 KKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEI 490

Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
                +    ++GK + A  L  +     +  +T  +N+++N L K     EA  +  + 
Sbjct: 491 SCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKM 550

Query: 253 FRLYSQPDTWTFNILIQGLSRIGEVKKA---------------FEFF------------- 284
            +    PD  T+  L  G  +IG++ +A                EFF             
Sbjct: 551 KQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQH 610

Query: 285 -------YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
                  ++M + G SP+ V Y  LI+G C+  ++   + L  E+  K    P++   +S
Sbjct: 611 GKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKG-LVPNLFICSS 669

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKP--------------------------SAVTFN 371
           ++S + + GK D+A  +   +    + P                          + + +N
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWN 729

Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
           ++I G  K+G +  A+ +   +   G++ D  T+SSLI G   +G ++    L D M   
Sbjct: 730 IVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV 789

Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
            L+PN+ T+  LI  LCK   L+ A    K+L    + P    YN +ID  CK G + EA
Sbjct: 790 GLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEA 849

Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
             +   M E+   P   T++ILI G C +G M EAI + ++M+     P+ +T  +LI  
Sbjct: 850 FKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQG 909

Query: 552 LLKGG------MPNEAFRIMQRASEDQNLQLP 577
            ++        MP +   I+ +AS  + ++ P
Sbjct: 910 YVRCESVDVPIMPLDQSTIVVKASPRRAVRRP 941



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 209/469 (44%), Gaps = 63/469 (13%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY L+++  C E  + ++  VV +  ++   + +  +    ++   + G+ + A  LL++
Sbjct: 315 TYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNE 374

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                + ++ F+YN ++N   K     EA  +  E   +  +PDT+++N L+ G  + G 
Sbjct: 375 MVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGL 434

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + KAFE +  M   G +   +TYN L+ G C +  +     L   +  K   +P+ ++ +
Sbjct: 435 MNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWF-LMLKKGIAPNEISCS 493

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G+ K GK +KA  ++ E  + G+  +  TFN +I+G  K+  M  AE + ++M  +
Sbjct: 494 TLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQW 553

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCD------------------------------ 426
              PD++T+ +L  GYC+ G +++  ++ +                              
Sbjct: 554 RCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKV 613

Query: 427 -----EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
                EM  + LSPN   +  LI   CKE  L+ A     ++    LVP  F+ + ++  
Sbjct: 614 NDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSC 673

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPD--------------------------KVTFTILII 515
           F + G  DEAN+++  +      PD                          K+ + I+I 
Sbjct: 674 FYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIF 733

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G C  GR+ +A ++   +   G   D+ T +SLI      G  + AF +
Sbjct: 734 GLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDL 782


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 166/306 (54%), Gaps = 2/306 (0%)

Query: 246 VYMFKEYFRLYSQPDT-WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLIS 304
           V+ F E F     P + + FNIL     + G+++ A   F  +  +G  P +V+YNTL++
Sbjct: 126 VWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMN 185

Query: 305 GLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK 364
           G  R+ ++  G +L K     S   PDV TY+ +I+G CK  KMD A  +++EM   G+ 
Sbjct: 186 GYIRLGDLDEGFKL-KSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLV 244

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           P+ VTF  LIDG  K G +  A  + ++MLS   LPD++T+++LI G C+ G LNQ   L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDL 304

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCK 484
            DEM  K L P+  T+T LI+  CKE  L+ A    K++   ++      Y  +I G C+
Sbjct: 305 IDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQ 364

Query: 485 AGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
            G   +A  ++ EM     KPD  T+T++I   C KG + +   +  +M   G AP  +T
Sbjct: 365 EGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVT 424

Query: 545 VNSLIS 550
            N L++
Sbjct: 425 YNVLMN 430



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 181/349 (51%), Gaps = 9/349 (2%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW----TFNILIQGLSRIGEVKKAFE 282
           ++++ L+ A ++     +AV    E +RL  +   W    T   +++ L ++   K  + 
Sbjct: 73  YVFSGLITAYLESGFLRDAV----ECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           F+ +    G    +  +N L    C+  ++     +   +  K    P VV+Y ++++GY
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAIT-KWGLRPSVVSYNTLMNGY 187

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            +LG +D+   + + M++ G+ P   T++VLI+G  K   M  A  + + ML  G +P+ 
Sbjct: 188 IRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNG 247

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VTF++LIDG+C+NG+++  +++  +M  ++L P++ T+  LI  LCK+  LN A   + +
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDE 307

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    L P    Y  +IDG CK G++D A      M ++  + D V +T LI G C +GR
Sbjct: 308 MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 367

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            V+A  +  +ML +G  PD  T   +I+ + K G   +  ++++    D
Sbjct: 368 SVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXD 416



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 163/305 (53%), Gaps = 1/305 (0%)

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           G   +F       S + +N L +   K+ +   A  +F    +   +P   ++N L+ G 
Sbjct: 128 GFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGY 187

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            R+G++ + F+    M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+
Sbjct: 188 IRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKG-LVPN 246

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
            VT+T++I G+CK G++D A  IY +M S  + P  +T+N LI G  K G++  A  + +
Sbjct: 247 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLID 306

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M   G  PD +T+++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E 
Sbjct: 307 EMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 366

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           R  DA + ++++    L P    Y  +I+  CK G+V + + ++ EM+     P  VT+ 
Sbjct: 367 RSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYN 426

Query: 512 ILIIG 516
           +L+ G
Sbjct: 427 VLMNG 431



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++    C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 141 SLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLK 200

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D A  +F E       P+  TF  LI G  + 
Sbjct: 201 SAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKN 260

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S    PD++TYNTLI GLC+  ++ + H+L+ E+  K    PD +T
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKG-LKPDKIT 319

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   ML
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREML 379

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           S G  PD  T++ +I+  C+ G + +G KL  EM+    +P+V T+ +L+N 
Sbjct: 380 SVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 178/359 (49%), Gaps = 2/359 (0%)

Query: 204 AGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           AG   +A  +L++  + G+  +      +L+N   K  +  EA  +F E   L   P+  
Sbjct: 15  AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+  L+ G    G+ +K F  F +M   G  P++ TYN LI   CR  E  R   L  E+
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +     +VV+Y ++I+G C+ GK+  A  + + M + G +PS +TFN+L+DG+GK G 
Sbjct: 135 PVRG-IVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGK 193

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M +A     +M + G+ P  VT++ LI G+CR   + +  +   +MK + L P   T+TI
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI++  +EN +  A   L  ++   L      Y  ++   C  GN+ +A  +   M EK 
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +P  V + ++I G+  +G   +A+ +  +M + G  P+  +    I  L K     EA
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEA 372



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 190/387 (49%), Gaps = 12/387 (3%)

Query: 156 FKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + T    +R LC  G +  ++ ++    +S     +       V+ C + G    A+ + 
Sbjct: 2   WGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVF 61

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            +       P EVT     Y +L++        ++   +F+E  R   +P+ +T+N LI 
Sbjct: 62  DEMPLLGLAPNEVT-----YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIG 116

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              R GE ++A   F +M   G   ++V+YNTLI+GLCR  ++    +LL  ++ +    
Sbjct: 117 EWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGT-R 175

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P ++T+  ++ GY K GKM  A   +N+M + G +PSAVT+N+LI GF +  +M  A   
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  P  VT++ LID + R   + +  ++   M+   L  + +T+ +L+ ALC 
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E  + DAR+  + +    + P   +Y+ +I G+ + G+  +A  ++ EM +K   P+  +
Sbjct: 296 EGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSAS 355

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRI 536
           + + I   C   +  EA ++ + M  I
Sbjct: 356 YGLTIRVLCKDDKCQEAEALLDDMETI 382



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 156/306 (50%), Gaps = 1/306 (0%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D      L+ G  + G+V +A   F +M   G +P+ VTY  L+ G     +  +G  L 
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E++ +    P++ TY  +I  +C+ G+ ++A  +++EM   GI  + V++N LI G  +
Sbjct: 97  EEMR-RGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCR 155

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +  A  + + M + G  P ++TF+ L+DGY + G+++  L   ++MK     P+  T
Sbjct: 156 HGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVT 215

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + +LI   C+   +  A R L  +K   L P    Y  +ID F +  ++ +A  I+A ME
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           +   + D  T+ +L+   CM+G M +A  +F  M   G  P ++  + +I    + G   
Sbjct: 276 KAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSY 335

Query: 560 EAFRIM 565
           +A +++
Sbjct: 336 KALKLI 341



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 3/311 (0%)

Query: 262 W-TFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELL 319
           W T    ++ L   G+V+ A          G  + D+     L++G C+  +VA    + 
Sbjct: 2   WGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVF 61

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+      +P+ VTYT+++ GY   G+ +K   ++ EM   G++P+  T+N LI  + +
Sbjct: 62  DEMPLLG-LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G    A  + + M   G + +VV++++LI G CR+G+L    KL D M+ +   P++ T
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F +L++   K  ++++A  F  Q+K     P    YN +I GFC+A ++  AN  +++M+
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E+  +P KVT+TILI     +  M +A  I   M + G   D  T   L+  L   G   
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMK 300

Query: 560 EAFRIMQRASE 570
           +A ++ Q   E
Sbjct: 301 DARKLFQSMGE 311



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 1/336 (0%)

Query: 167 CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           C+ G     + VFD M   G  PN       +      G+ +    L  + R G V  + 
Sbjct: 49  CKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNL 108

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           + YN L+    +    + A  +F E        +  ++N LI GL R G++  A +    
Sbjct: 109 YTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDM 168

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M + G  P I+T+N L+ G  +  +++       ++K  + F P  VTY  +I+G+C+  
Sbjct: 169 MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMK-AAGFQPSAVTYNMLIAGFCRAR 227

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            M +A    ++M   G++P+ VT+ +LID F +  +M  A  +   M   G   D  T+ 
Sbjct: 228 DMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYG 287

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            L+   C  G +    KL   M  K + P+   + ++I    +E     A + + +++  
Sbjct: 288 VLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
            L+P    Y   I   CK     EA  ++ +ME  R
Sbjct: 348 GLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIR 383


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 212/476 (44%), Gaps = 5/476 (1%)

Query: 95  FVKVVCTLL-LRSSYLSDTCA--RYLCEKLSPLNSLEVIKRL--DNPKLGLKFLEFSRVN 149
            V+  C LL LR S+     A  R L   LSP     V++     + +   +F  ++   
Sbjct: 61  LVRDTCRLLELRESWSPKLEAQLRQLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQ 120

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
               H+ + ++ ++  L    LHD  + V   M   G    +      + S  RAGK  +
Sbjct: 121 WRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRS 180

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A  +L   +         + N  +N LV     D+A+   +   R+  +PD +T+N LI+
Sbjct: 181 AMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIK 240

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           GL     V  A E    M   GC PD ++Y T++S LC+   V     LL+ ++  +   
Sbjct: 241 GLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLF 300

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           PD VTY  +I G  K G  D+A     E      +   V ++ ++  F   G M  A+ +
Sbjct: 301 PDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEI 360

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M+S G  PDVVT+S+++DG+CR G+L+Q  K+   M   +  PN  T T L+N LCK
Sbjct: 361 VGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCK 420

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
             + ++A   L + +     P    Y+ V+ GF + G + E+  +V +M +K   P  V 
Sbjct: 421 VGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVE 480

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
             +LI   C   +  EA     +    GC  + +   ++I    + G    A  +M
Sbjct: 481 INLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLM 536



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 204/471 (43%), Gaps = 40/471 (8%)

Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
           R+  E    + SL    RL +P   +  L   R    +    + +  +M S    G   S
Sbjct: 124 RHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRR---GVRRGTEQFAQLMLSYSRAGKLRS 180

Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
              V   M+ DG  P+  +    V+  + AG+ D A     + R   V    + YN L+ 
Sbjct: 181 AMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIK 240

Query: 235 ALVKQNNADEAVYMFK------------EYFRLYSQ------------------------ 258
            L       +A+ M               Y+ + S                         
Sbjct: 241 GLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLF 300

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  T+N+LI GL++ G   +A EF  +        D V Y+ ++   C    +A   E+
Sbjct: 301 PDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEI 360

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           + E+  K    PDVVTY++V+ G+C++G++D+A  +   M     KP+ VT   L++G  
Sbjct: 361 VGEMISKG-CQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLC 419

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           KVG    A  +  +     + P  +T+S ++ G+ R G+L +   +  +M  K   P   
Sbjct: 420 KVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTV 479

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
              +LI+ALCK+ +  +A+ F++Q +          +  VI GF + G+++ A  ++ +M
Sbjct: 480 EINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 539

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
                 PD VT+T+++     KGR+ EA  +  KML  G  P  +T  ++I
Sbjct: 540 YLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVI 590



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 158/348 (45%), Gaps = 3/348 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++ S C  G     + +   M S G  P+       V    R G+ D A+ ++    
Sbjct: 341 YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMY 400

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
             +   +T  + +LLN L K     EA  +  +    +  P   T+++++ G  R G++K
Sbjct: 401 KNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLK 460

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           ++ +    M   G  P  V  N LI  LC+  + A   + +++ + K   + +VV +T+V
Sbjct: 461 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKG-CTINVVNFTTV 519

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+ + G ++ A  + ++M      P  VT+ V++D  GK G +  A  + E+ML+ G 
Sbjct: 520 IHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGV 579

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
           LP  VT+ ++I  YC  G L   L L ++M  +    + Y    ++  LC   +LN+A  
Sbjct: 580 LPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAY--NQVVEKLCAFGKLNEAYS 637

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            L ++     V      + +++ F   G   +A  +   M  +   PD
Sbjct: 638 LLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPD 685



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 13/272 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           TY+ V+   C +G  D  + +  +M  +   PN+      ++   + GK   A  LL++ 
Sbjct: 375 TYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKS 434

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               + P ++T S  M+       +K++  D  V M ++ F     P T   N+LI  L 
Sbjct: 435 EEEWWTPSDITYSVVMHGFRREGKLKES-CDVVVQMLQKGF----FPTTVEINLLIHALC 489

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +  +  +A +F     S GC+ ++V + T+I G  R  ++     L+ ++ + S   PDV
Sbjct: 490 KDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM-YLSNRHPDV 548

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           VTYT V+    K G++ +ATG+  +M + G+ P+ VT+  +I  + + GN+     + E+
Sbjct: 549 VTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEK 608

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           ML+   +     ++ +++  C  G+LN+   L
Sbjct: 609 MLARQEMKS--AYNQVVEKLCAFGKLNEAYSL 638



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%)

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F  L+ +  +  +L  A R L  ++ +   P   + N  ++    AG VD+A      M 
Sbjct: 165 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 224

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
               +PD  T+  LI G C   R+V+A+ +   ML+ GC PD I+  +++S L K     
Sbjct: 225 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVE 284

Query: 560 EAFRIMQRASEDQNL 574
           E   ++QR   D  L
Sbjct: 285 EVRGLLQRMRNDAGL 299



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 7/247 (2%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           TY++VM      G L +S  VV   M   G  P +  I   + +  +  K   AK  + Q
Sbjct: 445 TYSVVMHGFRREGKLKESCDVVVQ-MLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQ 503

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +    T++   + ++++   +Q + + A+ +  + +     PD  T+ +++  L + G 
Sbjct: 504 CQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGR 563

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K+A      M + G  P  VTY T+I   C    +     LL+++  + E       Y 
Sbjct: 564 LKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS---AYN 620

Query: 337 SVISGYCKLGKMDKATG-IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            V+   C  GK+++A   +Y  + +  ++  A T ++L++ F   G  + A  +  RM  
Sbjct: 621 QVVEKLCAFGKLNEAYSLLYKILRTASVR-DAQTCHILMESFLNRGLGLQAYNVACRMFR 679

Query: 396 FGYLPDV 402
              +PDV
Sbjct: 680 RNLIPDV 686



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPK----PFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + A+ +     D RR  +  +W D   +    P +++ ++         D A  +V  M 
Sbjct: 95  VRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMI 154

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            +  +     F  L++ +   G++  A+ + + M + GCAPD    N  ++ L+  G  +
Sbjct: 155 RRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVD 214

Query: 560 EAFRIMQR 567
           +A    +R
Sbjct: 215 KALEFAER 222


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 180/359 (50%), Gaps = 2/359 (0%)

Query: 204 AGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           AG+  +A  LL++  + G+ T+      +L++   +  +  EA  +F    RL   P+  
Sbjct: 15  AGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEV 74

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           TF  LI G    G  +K    F  M   G  P++ TYN L+   CR  E  R   L +E+
Sbjct: 75  TFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEM 134

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             K   + +VV+Y ++I+G C+  KM  AT +   M   GI+PS VTFN+L+DG+GK G 
Sbjct: 135 PAKG-ITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGK 193

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M +A +   +M   GY P  VT+++LI G+CR   + +  +   +MK + L+P   T+TI
Sbjct: 194 MSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTI 253

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI+A  +EN ++ A      ++   L      Y  ++   C  GN+ +A  +   + EK 
Sbjct: 254 LIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKG 313

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +   V + +LI G+  +G   +A+ +  +M + G  P+  +    I  L   G  +EA
Sbjct: 314 LQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEA 372



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 180/344 (52%), Gaps = 6/344 (1%)

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
           P EVT     + +L++        ++ + +F++      +P+ +T+NIL+    R GE +
Sbjct: 71  PNEVT-----FTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFE 125

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A   F +M + G + ++V+YNTLI+GLCR  ++    +LL E+  +    P VVT+  +
Sbjct: 126 RARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLL-ELMRREGIRPSVVTFNLL 184

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + GY K GKM  A    N+M   G +PSAVT+N LI GF +  +M+ A      M   G 
Sbjct: 185 VDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGL 244

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P  VT++ LID + R   +++  ++   M+   L  +V T+ +L++ALC E  + DAR+
Sbjct: 245 APTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARK 304

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + +    L     +Y+ +I G+ + G+  +A  ++ EM +K   P+  ++ + I   C
Sbjct: 305 LFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILC 364

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             G+  EA ++ + M+R G    +     L++   + G P + F
Sbjct: 365 NDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQGSPTDDF 408



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 161/315 (51%), Gaps = 3/315 (0%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           T  + ++ LS  GEV+ A          G  + D+     L+ G CR  +VA    +  +
Sbjct: 4   TTAVAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVF-D 62

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           V  +   +P+ VT+T++I GY   G+ +K   ++ +M   GI+P+  T+N+L+  + + G
Sbjct: 63  VMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTG 122

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
               A  + E M + G   +VV++++LI G CR  ++    +L + M+ + + P+V TF 
Sbjct: 123 EFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFN 182

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           +L++   K  ++++A  F  Q++     P    YN +I GFC+A ++  AN   ++M+E+
Sbjct: 183 LLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKER 242

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
              P KVT+TILI     +  M +A  +F  M + G   D  T   L+  L   G   +A
Sbjct: 243 GLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDA 302

Query: 562 FRIMQRASEDQNLQL 576
            ++ Q   E + LQ+
Sbjct: 303 RKLFQSIGE-KGLQV 316



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 1/306 (0%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D      L+ G  R G+V +A   F  M   G +P+ VT+  LI G        +G  L 
Sbjct: 37  DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           ++++      P++ TY  ++  +C+ G+ ++A  ++ EM + GI  + V++N LI G  +
Sbjct: 97  EKMRIGG-IEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCR 155

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              M  A  + E M   G  P VVTF+ L+DGY + G+++  L   ++M+     P+  T
Sbjct: 156 YRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVT 215

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  LI   C+   +  A R    +K   L P    Y  +ID F +  ++D+A  + A ME
Sbjct: 216 YNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGME 275

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           +   + D  T+ +L+   CM+G M +A  +F  +   G    ++  + LI    + G   
Sbjct: 276 KAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSY 335

Query: 560 EAFRIM 565
           +A +++
Sbjct: 336 KAMKLI 341



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 1/314 (0%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L L  +  T+  ++      G  +    +F+ MR  G  PN       V    R G+ + 
Sbjct: 67  LGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFER 126

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A+ L  +     +T +   YN+L+  L +     +A  + +   R   +P   TFN+L+ 
Sbjct: 127 ARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVD 186

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
           G  + G++  A  F   M   G  P  VTYN LI+G CR  ++ R +    ++K +   +
Sbjct: 187 GYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERG-LA 245

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P  VTYT +I  + +   MDKA  ++  M   G++    T+ VL+      GNM  A  +
Sbjct: 246 PTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKL 305

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + +   G     V +  LI GY R G   + +KL  EM+ K   PN  ++ + I  LC 
Sbjct: 306 FQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCN 365

Query: 450 ENRLNDARRFLKQL 463
           + + ++A   +  +
Sbjct: 366 DGKCSEAEALIDDM 379



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 149/355 (41%), Gaps = 1/355 (0%)

Query: 167 CEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMST 226
           C  G     Q VFD M   G  PN       +      G+ +    L  + R G +  + 
Sbjct: 49  CRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNL 108

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           + YN L+    +    + A  +F+E        +  ++N LI GL R  ++K A +    
Sbjct: 109 YTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLEL 168

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   G  P +VT+N L+ G  +  +++       +++  + + P  VTY ++I+G+C+  
Sbjct: 169 MRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRM-AGYQPSAVTYNALIAGFCRAR 227

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            M +A   +++M   G+ P+ VT+ +LID F +  +M  A  M   M   G   DV T+ 
Sbjct: 228 DMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYG 287

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
            L+   C  G +    KL   +  K L      + +LI    +E     A + + +++  
Sbjct: 288 VLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKK 347

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
             VP    Y   I   C  G   EA  ++ +M     +  +    +L+     +G
Sbjct: 348 GFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQG 402


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 202/415 (48%), Gaps = 6/415 (1%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +Y  +MR+LC E     +V ++ D M++ G  P+       +     A   D A  LL +
Sbjct: 115 SYTTLMRALCAERRTGQAVGLLRD-MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLRE 173

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                +  +  +Y+ LL    K    +    +F+E      +PD   +  LI  L R G+
Sbjct: 174 MCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK 233

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           VKKA +    M   G  P++VTYN LI+ +C+   V     L   +  +   + D VTY 
Sbjct: 234 VKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM-LEKGVALDAVTYN 292

Query: 337 SVISGYCKLGKMDKATGIYNEM--NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           ++I+G   + +MD+A G+  EM      ++P+ VTFN +I G  K G M  A  +R+ M 
Sbjct: 293 TLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMA 352

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G   ++VTF+ LI G  R  ++ + ++L DEM    L P+ +T++ILIN  CK  +++
Sbjct: 353 ENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVD 412

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A   L +++ + + P+   Y P++   C+ G +++A     EM  K CK D V ++ +I
Sbjct: 413 RAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMI 471

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            G C       A      ML  G  PD +T + LI+     G    A R++++ +
Sbjct: 472 HGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMT 526



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 186/366 (50%), Gaps = 3/366 (0%)

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +++  R G C  A   L +    E   +   Y +L+ AL  +    +AV + ++      
Sbjct: 85  LAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGV 144

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PD  T+  LI+GL    +V KA E   +M   G  P++V Y+ L+ G C+        +
Sbjct: 145 RPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSK 204

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           + +E+  +    PDVV YT +I   C+ GK+ KAT + ++M   G++P+ VT+NVLI+  
Sbjct: 205 VFEEMSGRG-IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSM 263

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNL-SP 435
            K G++  A  +R  ML  G   D VT+++LI G     ++++ + L +EM  G+ +  P
Sbjct: 264 CKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEP 323

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
           NV TF  +I+ LCK  R+  A +    +  N        +N +I G  +   V +A  ++
Sbjct: 324 NVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELM 383

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            EM     +PD  T++ILI G C   ++  A S+ +KM R G  P+ +    L++ L + 
Sbjct: 384 DEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQ 443

Query: 556 GMPNEA 561
           GM  +A
Sbjct: 444 GMMEQA 449



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 193/396 (48%), Gaps = 8/396 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++R LC+    D    +   M   G  PN  +    +    +AG+ +    +  + 
Sbjct: 150 TYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM 209

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +     MY  L+++L ++    +A  +  +      +P+  T+N+LI  + + G V
Sbjct: 210 SGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSV 269

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE-VKFKSEFSPDVVTYT 336
           K+A     +M   G + D VTYNTLI+GL  V E+     LL+E +  ++   P+VVT+ 
Sbjct: 270 KEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFN 329

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           SVI G CK G+M +A  + + M   G   + VTFN+LI G  +V  +  A  + + M S 
Sbjct: 330 SVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS 389

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  PD  T+S LI+G+C+  Q+++   L  +M+   + P +  +  L+ ALC++  +  A
Sbjct: 390 GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQA 449

Query: 457 RRFLKQLKWN---DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           R F  ++  N   D+V     Y+ +I G C+  +   A   +  M ++   PD VT+++L
Sbjct: 450 RNFFDEMHKNCKLDVVA----YSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSML 505

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           I      G +  A  +  +M   G  PD    +SLI
Sbjct: 506 INMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLI 541



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 176/345 (51%), Gaps = 3/345 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           YN++L AL +Q    +A           ++P   ++  L++ L       +A     DM 
Sbjct: 81  YNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQ 140

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G  PD+VTY TLI GLC   +V +  ELL+E+  +S   P+VV Y+ ++ GYCK G+ 
Sbjct: 141 ASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM-CESGIEPNVVVYSCLLQGYCKAGRW 199

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           +  + ++ EM+  GI+P  V +  LID   + G +  A  + ++M+  G  P+VVT++ L
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVL 259

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I+  C+ G + + + L + M  K ++ +  T+  LI  L     +++A   L+++   + 
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET 319

Query: 469 VPKP--FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
           + +P    +N VI G CK G + +A  +   M E  C  + VTF +LI G     ++ +A
Sbjct: 320 MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKA 379

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           + + ++M   G  PD  T + LI+   K    + A  ++ +   D
Sbjct: 380 MELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRD 424



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 203/411 (49%), Gaps = 7/411 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            Y+ +++  C+ G  + V  VF+ M   G  P+  M    + S  R GK   A  ++ + 
Sbjct: 185 VYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKM 244

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  +   YN L+N++ K+ +  EA+ +           D  T+N LI GLS + E+
Sbjct: 245 MERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEM 304

Query: 278 KKAFEFFYDM--GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
            +A     +M  G     P++VT+N++I GLC+   + +  ++ +++  ++  + ++VT+
Sbjct: 305 DEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQV-RDMMAENGCACNLVTF 363

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I G  ++ K+ KA  + +EM S G++P + T+++LI+GF K+  +  AE +  +M  
Sbjct: 364 NLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRR 423

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P++V +  L+   C  G + Q     DEM  KN   +V  ++ +I+  C+      
Sbjct: 424 DGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKS 482

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A  FLK +    L+P    Y+ +I+ F  +G++  A  ++ +M      PD   F  LI 
Sbjct: 483 AEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIK 542

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           G+  KG   + + +  +M     A D   ++++ +CL+     NE   ++Q
Sbjct: 543 GYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN---NEGKALLQ 590



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 3/313 (0%)

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
           L S  D  ++N ++  L R G    A  F   + +    P  V+Y TL+  LC      +
Sbjct: 72  LPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQ 131

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              LL++++  S   PDVVTY ++I G C    +DKA  +  EM   GI+P+ V ++ L+
Sbjct: 132 AVGLLRDMQ-ASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLL 190

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
            G+ K G       + E M   G  PDVV ++ LID  CR G++ +  ++ D+M  + L 
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
           PNV T+ +LIN++CKE  + +A      +    +      YN +I G      +DEA  +
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGL 310

Query: 495 VAEM--EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           + EM   E   +P+ VTF  +I G C  GRM +A  + + M   GCA + +T N LI  L
Sbjct: 311 LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGL 370

Query: 553 LKGGMPNEAFRIM 565
           L+     +A  +M
Sbjct: 371 LRVHKVKKAMELM 383



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 142/279 (50%), Gaps = 3/279 (1%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           D V+YNT+++ LCR          L  V    E  P  V+YT+++   C   +  +A G+
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRV-MAHETRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
             +M + G++P  VT+  LI G     ++  A  +   M   G  P+VV +S L+ GYC+
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
            G+     K+ +EM G+ + P+V  +T LI++LC+E ++  A + + ++    L P    
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           YN +I+  CK G+V EA  +   M EK    D VT+  LI G      M EA+ +  +M+
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 535 R--IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
                  P+ +T NS+I  L K G   +AF++    +E+
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAEN 354


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 181/368 (49%), Gaps = 18/368 (4%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNAD----------EAVYMFKEYFRLYSQPDTWTFNI 266
           F+P  VT +T ++   L   + +  A           EAV +F +   +   P   TFN 
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI GL   G V +A      M   G   D+VTY T+++G+C++ +      LL +++ ++
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ET 290

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PDVV Y+++I   CK G    A  +++EM   GI P+  T+N +IDGF   G    A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + +   M+     PDV+TF++LI    + G+L +  KLCDEM  + + P+  T+  +I  
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
            CK NR +DA+     +   D+V     +N +ID +C+A  VDE   ++ E+  +    +
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FR 563
             T+  LI G C    +  A  +F +M+  G  PD IT N L+    +     EA   F 
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526

Query: 564 IMQRASED 571
           ++Q +  D
Sbjct: 527 VIQMSKID 534



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 193/418 (46%), Gaps = 5/418 (1%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V + L     T+N ++  LC  G       + + M   G   +       V+   + G  
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
            +A  LLS+     +     +Y+++++ L K  +  +A Y+F E       P+ +T+N +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G    G    A     DM     +PD++T+N LIS   +  ++    +L  E+  +  
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           F PD VTY S+I G+CK  + D A  +++ M S    P  VTFN +ID + +   +    
Sbjct: 398 F-PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 452

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   +   G + +  T+++LI G+C    LN    L  EM    + P+  T  IL+   
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C+  +L +A    + ++ + +      YN +I G CK   VDEA  +   +     +PD 
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            T+ ++I G C K  + +A  +F+KM   G  PD+ T N+LI   LK G  +++  ++
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 187/394 (47%), Gaps = 21/394 (5%)

Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
           L D++   FDYM        +      +   +R  + D A  L  +     + ++ + +N
Sbjct: 87  LDDAIDF-FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL---SRIGEVKKAFEFFYDM 287
            L+      +    ++  F +  +L  QPD  TFN L+ GL    RI E    F +  + 
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205

Query: 288 G------------SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
           G              G +P ++T+NTLI+GLC    V     L+ ++  K     DVVTY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTY 264

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++++G CK+G    A  + ++M    IKP  V ++ +ID   K G+   A+Y+   ML 
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+V T++ +IDG+C  G+ +   +L  +M  + ++P+V TF  LI+A  KE +L +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A +   ++    + P    YN +I GFCK    D+A      M +    PD VTF  +I 
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVVTFNTIID 440

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            +C   R+ E + +  ++ R G   +  T N+LI
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 190/388 (48%), Gaps = 5/388 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  ++  +C+MG   S   +   M      P+  +    +    + G    A+ L S+ 
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + F YN +++         +A  + ++       PD  TFN LI    + G++
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M      PD VTYN++I G C+ N       +     F    SPDVVT+ +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM-----FDLMASPDVVTFNT 437

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  YC+  ++D+   +  E++  G+  +  T+N LI GF +V N+ +A+ + + M+S G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD +T + L+ G+C N +L + L+L + ++   +  +   + I+I+ +CK +++++A 
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                L  + + P    YN +I GFC    + +ANV+  +M++   +PD  T+  LI G 
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITV 545
              G + ++I + ++M   G + D  T+
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAFTI 645



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 176/354 (49%), Gaps = 18/354 (5%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N ++   V+ N  D A+ ++++        + ++FNILI+      ++  +   F  +  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 290 FGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSE-----------FSPDVVTY 335
            G  PD+VT+NTL+ GLC   R++E       + E  F               +P V+T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I+G C  G++ +A  + N+M   G+    VT+  +++G  K+G+  SA  +  +M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
               PDVV +S++ID  C++G  +    L  EM  K ++PNV+T+  +I+  C   R +D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A+R L+ +   ++ P    +N +I    K G + EA  +  EM  +   PD VT+  +I 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
           G C   R  +A  +F+ M     +PD +T N++I    +    +E  ++++  S
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 32/323 (9%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++   C  G     Q +   M      P+       +S+ ++ GK   A+ L  + 
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMF---------------------------- 249
               +   T  YNS++    K N  D+A +MF                            
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452

Query: 250 ---KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
              +E  R     +T T+N LI G   +  +  A + F +M S G  PD +T N L+ G 
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C   ++    EL + ++  S+   D V Y  +I G CK  K+D+A  ++  +   G++P 
Sbjct: 513 CENEKLEEALELFEVIQM-SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
             T+NV+I GF     +  A  +  +M   G+ PD  T+++LI G  + G++++ ++L  
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631

Query: 427 EMKGKNLSPNVYTFTILINALCK 449
           EM+    S + +T  +    +C+
Sbjct: 632 EMRSNGFSGDAFTIKMAEEIICR 654



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 25/280 (8%)

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS----VISGYCKLGKMDK 350
           DI   NT  SG  R+N     H  + E   KS  S   VT+      + SG      +D 
Sbjct: 31  DIEKKNTK-SGGVRLNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDD 89

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
           A   ++ M       +AV  N +I  F ++     A  +  +M       ++ +F+ LI 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149

Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
            +C   +L+  L    ++      P+V TF  L++ LC E+R+++A      +       
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM------- 202

Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
                  V  GF       EA  +  +M E    P  +TF  LI G C++GR++EA ++ 
Sbjct: 203 -------VETGFL------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249

Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           NKM+  G   D +T  ++++ + K G    A  ++ +  E
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 41/217 (18%)

Query: 131 KRLDNPKLGLKFL-EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           KR+D    G++ L E SR  L  N +  TYN ++   CE+   ++ Q +F  M S G  P
Sbjct: 446 KRVDE---GMQLLREISRRGLVANTT--TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           ++      +       K + A  L    +  ++ + T  YN +++ + K +  DEA  +F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 250 ------------KEYFRLYS-----------------------QPDTWTFNILIQGLSRI 274
                       + Y  + S                       +PD  T+N LI+G  + 
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
           GE+ K+ E   +M S G S D  T       +CRV++
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 203/418 (48%), Gaps = 80/418 (19%)

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           ++RP     S F  N+LL ALV+ +  D A   F+   R    PD +TFNI+I G  + G
Sbjct: 148 RYRP-----SAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTG 202

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE---LLKEVKFKSEFSPDV 332
           +++KA +   ++ ++G +P + TYNTLI G C+  +V + +    LLKE+  ++  SPDV
Sbjct: 203 QLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEM-IQAGISPDV 261

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI------------------ 374
           VT+  +I+GYCK   +  A  ++ EM   GI  + VT+N L+                  
Sbjct: 262 VTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEE 321

Query: 375 -----------------DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR--- 414
                            +GF K G MV AE   + +   G  P+V+T+++L+DGY R   
Sbjct: 322 MEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGK 381

Query: 415 ------------NGQLNQGLK--------------------LCDEMKGKNLSPNVYTFTI 442
                          ++  +K                    L DEMK K +  +V T+ +
Sbjct: 382 MKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNV 441

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI ALC +  +  A + L ++    L PK   YN +I+GFC+ G+   A+ I   ME+++
Sbjct: 442 LIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRK 501

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL-KGGMPN 559
            + + VT+ + +   C  G+M EA  + N+ML  G  P+ IT   + S ++ KG +P+
Sbjct: 502 KRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPD 559



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 156/349 (44%), Gaps = 4/349 (1%)

Query: 155 SFKTYNLVMRSLC---EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           S  TYN ++   C   ++G    V  +   M   G  P+       ++   +     AA 
Sbjct: 222 SVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAI 281

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            +  + R   +  +   YNSL++ L ++   ++++ + +E   L       T N ++ G 
Sbjct: 282 KVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGF 341

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G + +A  +   +   G  P+++TYNTL+ G  R+ ++         +  K   SP+
Sbjct: 342 CKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKG-ISPN 400

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TY  +I+G+         +G+ +EM   G+K   VT+NVLI      G +  A  + +
Sbjct: 401 VKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLD 460

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
            M+  G  P  V ++++I+G+C  G      ++   M+ +    NV T+ + +   CK  
Sbjct: 461 EMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMG 520

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
           ++++A   L ++    LVP    Y  +  G  + G V + +   A++ +
Sbjct: 521 KMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDISGYAADVSK 569



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 146/309 (47%), Gaps = 1/309 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C+     +   VF  MR  G   N       VS   R GK + +  L+ + 
Sbjct: 263 TFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEM 322

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +       NS+LN   K+    EA        +   +P+  T+N L+ G  R+G++
Sbjct: 323 EELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKM 382

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           K+A      M   G SP++ TYN LI+G     +      LL E+K K     DVVTY  
Sbjct: 383 KEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKG-VKADVVTYNV 441

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   C  G++ KA  + +EM   G++P  V +N +I+GF + G+   A  +R RM    
Sbjct: 442 LIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRK 501

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
              +VVT++  +  +C+ G++++   + +EM  K L PN  T+ I+ + + ++  + D  
Sbjct: 502 KRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDIS 561

Query: 458 RFLKQLKWN 466
            +   +  N
Sbjct: 562 GYAADVSKN 570



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 17/258 (6%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           L L     T N V+   C+ G+    +   D +   G  PN       V    R GK   
Sbjct: 325 LGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKE 384

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A           ++ +   YN L+       +      +  E      + D  T+N+LI 
Sbjct: 385 AAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIG 444

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L   GEV+KA +   +M   G  P  V YNT+I+G C   +    HE+   ++ K +  
Sbjct: 445 ALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRME-KRKKR 503

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            +VVTY   +  +CK+GKMD+A  + NEM   G+ P+ +T+ ++  G             
Sbjct: 504 ANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG------------- 550

Query: 390 RERMLSFGYLPDVVTFSS 407
              M+  GY+PD+  +++
Sbjct: 551 ---MIEKGYVPDISGYAA 565


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 210/429 (48%), Gaps = 15/429 (3%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN--SPMIEFFVSSCIRAGKCDAAKGL 213
            + +  ++R L   G  +     +++M    HL +  S +    +S+  R GK + A  +
Sbjct: 163 LEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDV 222

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
            ++ +      + + Y+++++A  +     EA+ +F+   +   +P+  T+N +I    +
Sbjct: 223 FNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGK 282

Query: 274 IG-EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
            G ++K+A + F +M   G  PD +T+N+LI+   R         +  E++ +     D+
Sbjct: 283 GGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRG-IEQDI 341

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T+ ++I   CK G+M+ A  I   M    I P+ VT++ +IDG+GK+G    A  +   
Sbjct: 342 FTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHD 401

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PD V++++LID Y + G+ +  L  C +M+   L  +V T+  LI+A  K+ +
Sbjct: 402 MKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGK 461

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
             DA     ++K   LVP    Y+ +ID + KAG   + + +  E +    KPD V ++ 
Sbjct: 462 YKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSS 521

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL-----------LKGGMPNEA 561
           LI   C  G + +A+ +  +M + G  P+ +T NSLI              +K  MPN  
Sbjct: 522 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSV 581

Query: 562 FRIMQRASE 570
            +I +R+ E
Sbjct: 582 QKIGERSME 590



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 153/351 (43%), Gaps = 42/351 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N ++      GL +  Q VF  M+  G   +       + +  + G+ + A  +++  
Sbjct: 308 TFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTM 367

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           R   ++ +   Y+++++   K    +EA+ ++ +      +PD  ++N LI   +++G  
Sbjct: 368 RGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRF 427

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A     DM   G   D+VTYN LI    +  +      L  ++K +    P+V+TY++
Sbjct: 428 DDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEG-LVPNVLTYSA 486

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I  Y K G     + ++ E    G+KP  V ++ LID   K G +  A  + + M   G
Sbjct: 487 LIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 546

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQ------------------------------------- 420
             P++VT++SLID Y R GQ ++                                     
Sbjct: 547 IQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHT 606

Query: 421 ----GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
                + +  EM+   L PNV TF+ ++NA  +   L +A   L+Q+++ D
Sbjct: 607 GVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMRFFD 657



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 120/267 (44%), Gaps = 34/267 (12%)

Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
           + R D+  +  K +E  RV L  +    TYN ++ +  + G +     +FD M+ +G +P
Sbjct: 424 LGRFDDALIACKDME--RVGLKAD--VVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVP 479

Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
           N       + S  +AG       + ++F+   +     +Y+SL+++  K    ++AV + 
Sbjct: 480 NVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLL 539

Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
           +E  +   QP+  T+N LI    R G+  K      +M      P+ V          ++
Sbjct: 540 QEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANM------PNSVQ---------KI 584

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            E  R  E++++     + + D   +T V++          A  +++EM   G+KP+ VT
Sbjct: 585 GE--RSMEVVRKPPPSQQNASD---HTGVLA----------AVSVFHEMQQFGLKPNVVT 629

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSF 396
           F+ +++   +  ++  A  + E+M  F
Sbjct: 630 FSAILNACSRCASLQEASVLLEQMRFF 656


>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 165/307 (53%), Gaps = 1/307 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           F+ L + L+ + + + A + F  M  +G  P + + N  +S L  ++ V       KE++
Sbjct: 149 FDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMR 208

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +   SP+V T   V+  +CK GK++KA  ++ EM S GI P+  ++N LI G+ + G +
Sbjct: 209 -RCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLL 267

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
            SA  ++  M + G   +VVTF+SLIDG+C+ G+L++  K+  EMK  N++PN  T+  L
Sbjct: 268 NSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTL 327

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           IN   +       RR  +++  N +      YN +I G CK G   +A  +V E++++  
Sbjct: 328 INGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENL 387

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
            P+  TF+ LI G C++     A  ++  M+RIGC P++ T N L+S   K      AF 
Sbjct: 388 VPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFL 447

Query: 564 IMQRASE 570
           ++    E
Sbjct: 448 VLMEMFE 454



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/502 (22%), Positives = 221/502 (44%), Gaps = 33/502 (6%)

Query: 95  FVKVVCTLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPK-LGLKFLEFSRVNLSLN 153
           FV V  + L+ S +   T    L   L+P     ++ ++     L L+F  + +     +
Sbjct: 34  FVNVAHSHLIHSDWKKLTS---LSTHLTPFRVKHILLKIQKDHVLSLEFFNWVQTENPSS 90

Query: 154 HSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG--HLPNSPMIEFFVSSCIRAGKCDAAK 211
           H+ +T+++++  L +     S +++   +   G   LP+    + F +       CD+  
Sbjct: 91  HTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPD----KLFEAILYSYRMCDS-- 144

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALV---KQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
                        S  +++SL   L    K  NA +     K Y  L   P   + N  +
Sbjct: 145 -------------SPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFL---PTVESCNAYL 188

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
             L  +  V  A  F+ +M     SP++ T N ++   C+  ++ +  ++ +E++     
Sbjct: 189 SSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEME-SVGI 247

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP+  +Y ++I GYC+ G ++ A  + N M + G++ + VTFN LIDGF K G +  A  
Sbjct: 248 SPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASK 307

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   M      P+ +T+++LI+G+ + G    G +L +EM    +  ++ T+  LI  LC
Sbjct: 308 VFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLC 367

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           KE +   A   +K+L   +LVP    ++ +I G C   N D A  +   M    C P++ 
Sbjct: 368 KEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQ 427

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           TF +L+   C       A  +  +M      P    ++ +   L   G  + A ++    
Sbjct: 428 TFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSEL 487

Query: 569 SEDQNLQLPSWKKAVPLRTNTD 590
            + +++    ++KA P+    +
Sbjct: 488 -KARHMMTKGFEKAKPINAGAE 508


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 181/339 (53%), Gaps = 2/339 (0%)

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           ++C R+G   A K LL + R    T     YN ++N + ++   D+A+   K       +
Sbjct: 1   ATCKRSGYKQAMK-LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE 59

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P+T ++NI+++GL      + A E   +MG  GC P++VT+N LIS LCR   V    E+
Sbjct: 60  PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 119

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+++  K   +P+ ++Y  ++  +CK  KMDKA    + M S G  P  V++N L+    
Sbjct: 120 LEQIP-KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALC 178

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G +  A  +  ++   G  P +++++++IDG  + G+  + L+L +EM  K L P++ 
Sbjct: 179 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 238

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T++ +   LC+E+R+ DA R   +++   + P   +YN +I G CK      A  + A M
Sbjct: 239 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 298

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
               C P++ T+TILI G   +G + EA  + +++   G
Sbjct: 299 IGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 337



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 171/327 (52%), Gaps = 1/327 (0%)

Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
           A  K++   +A+ +  E       PD  T+N+++ G+ + G V  A EF  ++ S+GC P
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
           + V+YN ++ GLC         EL+ E+  K    P+VVT+  +IS  C+ G ++ A  +
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEV 119

Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
             ++   G  P+++++N L+  F K   M  A    + M+S G  PD+V++++L+   CR
Sbjct: 120 LEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 179

Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
           +G+++  ++L  ++K K  +P + ++  +I+ L K  +  +A   L ++    L P    
Sbjct: 180 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 239

Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
           Y+ +  G C+   +++A     ++++   +P+ V +  +I+G C +     AI +F  M+
Sbjct: 240 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI 299

Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEA 561
             GC P++ T   LI  L   G+  EA
Sbjct: 300 GNGCMPNESTYTILIEGLAYEGLIKEA 326



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 155/334 (46%), Gaps = 1/334 (0%)

Query: 165 SLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
           + C+   +     + D MR  G  P+       V+   + G+ D A   L          
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +T  YN +L  L      ++A  +  E  +    P+  TFN+LI  L R G V+ A E  
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             +  +GC+P+ ++YN L+   C+  ++ +    L  +  +  + PD+V+Y ++++  C+
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY-PDIVSYNTLLTALCR 179

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  + +++   G  P  +++N +IDG  K G    A  +   M+S G  PD++T
Sbjct: 180 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 239

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +S++  G CR  ++   ++   +++   + PN   +  +I  LCK    + A      + 
Sbjct: 240 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMI 299

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            N  +P    Y  +I+G    G + EA  ++ E+
Sbjct: 300 GNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 333



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 157/317 (49%), Gaps = 1/317 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN+V+  +C+ G  D        + S G  PN+      +     A + + A+ L+ + 
Sbjct: 29  TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 88

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   +N L++ L ++   + A+ + ++  +    P++ ++N L+    +  ++
Sbjct: 89  GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 148

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            KA  F   M S GC PDIV+YNTL++ LCR  EV    ELL ++K K   +P +++Y +
Sbjct: 149 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG-CAPVLISYNT 207

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G  K GK  +A  + NEM S G++P  +T++ +  G  +   +  A     ++   G
Sbjct: 208 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 267

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+ V ++++I G C+  + +  + L   M G    PN  T+TILI  L  E  + +AR
Sbjct: 268 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 327

Query: 458 RFLKQLKWNDLVPKPFM 474
             L +L    +V K  +
Sbjct: 328 DLLDELCSRGVVRKSLI 344



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 139/264 (52%), Gaps = 1/264 (0%)

Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
           C+ +   +  +LL E++ K   +PD+VTY  V++G C+ G++D A      + S G +P+
Sbjct: 3   CKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 61

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            V++N+++ G         AE +   M   G  P+VVTF+ LI   CR G +   L++ +
Sbjct: 62  TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 121

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
           ++     +PN  ++  L++A CK+ +++ A  FL  +      P    YN ++   C++G
Sbjct: 122 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 181

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
            VD A  ++ ++++K C P  +++  +I G    G+  EA+ + N+M+  G  PD IT +
Sbjct: 182 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 241

Query: 547 SLISCLLKGGMPNEAFRIMQRASE 570
           ++ + L +     +A R   +  +
Sbjct: 242 TIAAGLCREDRIEDAIRAFGKVQD 265



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%)

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           A CK +    A + L +++     P    YN V++G C+ G VD+A   +  +    C+P
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + V++ I++ G C   R  +A  +  +M + GC P+ +T N LIS L + G+   A  ++
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 566 QR 567
           ++
Sbjct: 121 EQ 122


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 201/417 (48%), Gaps = 6/417 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN ++     +GL   V  +  +MR  G  P+       ++    +G  +    + +  
Sbjct: 310 TYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDI 369

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + ++   Y+ LLNAL K+    EA  +  E   +    D   ++ILI G  ++GE+
Sbjct: 370 LDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEI 429

Query: 278 KKAFEFFYDMG-SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP-DVVTY 335
           ++A E    M  S    P  + + +++ GLC+   +      L+ V  K  + P DVV Y
Sbjct: 430 ERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVK--YQPGDVVLY 487

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE-YMRERML 394
             VI GY K+G +  A G+Y+++   G+ P+ VT N ++ G+ K G++ +AE Y R   +
Sbjct: 488 NVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQI 547

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
           S   LP +VT+++L+D     G++N  L +  EM  K + PN  T++++I  LCKE R +
Sbjct: 548 S-SLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFH 606

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA  FL  +    +   P  YN +I GFC+  ++  A  I   M      P  VT+  LI
Sbjct: 607 DAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLI 666

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
              C+KG++++A  +   +   G         +LI      GMP EA  +  +  +D
Sbjct: 667 NVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDD 723



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 228/510 (44%), Gaps = 54/510 (10%)

Query: 105 RSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFS------RVNLSLNHSFKT 158
           R+  + D  A Y+  K++ LN    +   D+   GL+  + +           ++ S  +
Sbjct: 147 RAQMIHD--ALYVLSKMNSLNMQISVSTYDSLLYGLRMTDMALELFEEMEAYGISKSEYS 204

Query: 159 YNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +++++  LC+   + +++  + +  + +   P        +S+    G    AK  L   
Sbjct: 205 HSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNWGFIQPAKSFLCLM 264

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG-- 275
               +    + Y++L++ L K    DEAV +F+       + +T T+N LI G   +G  
Sbjct: 265 LKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLT 324

Query: 276 -EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG------------------- 315
            EV K  +F   M   G  PDIVTY  LI+G C   +V  G                   
Sbjct: 325 REVPKIIQF---MRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTY 381

Query: 316 -------------HE---LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM- 358
                        HE   LL E+        D++ Y+ +I GYCKLG++++A  + + M 
Sbjct: 382 SVLLNALFKKGLVHEAENLLGEIH-SIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMC 440

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP-DVVTFSSLIDGYCRNGQ 417
            S  + P+++    ++ G  K G +V A +  E  ++  Y P DVV ++ +IDGY + G 
Sbjct: 441 CSQKVVPTSLNHLSILVGLCKKGLLVEARWYLEN-VAVKYQPGDVVLYNVVIDGYAKIGD 499

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           ++  + L D++    + P + T   ++   CK   L  A  + + ++ + L+P    Y  
Sbjct: 500 ISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTT 559

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++D   +AG V+    I+ EM EK  KP+ +T++++I G C + R  +AI   + M   G
Sbjct: 560 LMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEG 619

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              D +T N+LI    +      AF I  R
Sbjct: 620 VNADPVTYNTLIQGFCEVQDIQMAFHIHDR 649



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 151/334 (45%), Gaps = 1/334 (0%)

Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
           +V  ++  + S+L  L K+    EA +  +     Y   D   +N++I G ++IG++  A
Sbjct: 444 KVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNA 503

Query: 281 FEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
              +  +   G  P IVT N+++ G C+  ++       + ++  S   P +VTYT+++ 
Sbjct: 504 VGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISS-LLPTMVTYTTLMD 562

Query: 341 GYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
              + GK++    I  EM   GIKP+A+T++V+I G  K      A +  + M   G   
Sbjct: 563 ALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNA 622

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D VT+++LI G+C    +     + D M    + P   T+  LIN LC + ++  A   L
Sbjct: 623 DPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLL 682

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           + L+   +  + F Y  +I   C  G   EA  +  ++ +   +     F+  I   C +
Sbjct: 683 ESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKR 742

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
               EA+     ML  G  PD      L+  L K
Sbjct: 743 KFAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQK 776



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 163/338 (48%), Gaps = 4/338 (1%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S+ M+++L N+  +     +A+Y+  +   L  Q    T++ L+ GL R+ ++  A E F
Sbjct: 134 SSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGL-RMTDM--ALELF 190

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
            +M ++G S    +++ +I GLC+ ++V      L+E +    F P  +++  ++S  C 
Sbjct: 191 EEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCN 250

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G +  A      M   G+ P   T++ LI G  K+G +  A  + ER+   G   + VT
Sbjct: 251 WGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVT 310

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           ++SLI+GY   G   +  K+   M+ + + P++ T+TILI   C+   + +  +    + 
Sbjct: 311 YNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDIL 370

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
              L      Y+ +++   K G V EA  ++ E+       D + ++ILI G+C  G + 
Sbjct: 371 DQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIE 430

Query: 525 EAISIFNKM-LRIGCAPDDITVNSLISCLLKGGMPNEA 561
            A+ + + M       P  +   S++  L K G+  EA
Sbjct: 431 RALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEA 468



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 9/273 (3%)

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
           C P  + ++ L +   R   +     +L ++         V TY S++ G   L   D A
Sbjct: 131 CDPSSIMWDALANSYARAQMIHDALYVLSKMN-SLNMQISVSTYDSLLYG---LRMTDMA 186

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGF---GKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             ++ EM + GI  S  + +++IDG     KVG  +S  +++E      + P  ++F+ L
Sbjct: 187 LELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALS--FLQEARKGERFKPLGMSFNVL 244

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           +   C  G +         M    L+P+ YT++ LI+ LCK   L++A    +++    +
Sbjct: 245 MSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGM 304

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
             +   YN +I+G+   G   E   I+  M  +  +PD VT+TILI GHC  G + E + 
Sbjct: 305 KLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMK 364

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
           I N +L  G   + +T + L++ L K G+ +EA
Sbjct: 365 IRNDILDQGLQLNIVTYSVLLNALFKKGLVHEA 397



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 159/344 (46%), Gaps = 16/344 (4%)

Query: 228 MYNSLLNALVKQNNADEAVY--MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
           M  +L   + +Q +   A+   + +  FR    P +  ++ L    +R   +  A     
Sbjct: 101 MRGALAQMVTEQGSGSAAILCDILRNGFR-ECDPSSIMWDALANSYARAQMIHDALYVLS 159

Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF----KSEFSPDVVTYTSVISG 341
            M S      + TY++L+ GL R+ ++A   EL +E++     KSE+S     ++ +I G
Sbjct: 160 KMNSLNMQISVSTYDSLLYGL-RMTDMAL--ELFEEMEAYGISKSEYS-----HSIIIDG 211

Query: 342 YCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP 400
            CK  K+ +A     E       KP  ++FNVL+      G +  A+     ML +G  P
Sbjct: 212 LCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNWGFIQPAKSFLCLMLKYGLNP 271

Query: 401 DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFL 460
           D  T+S+LI G C+ G L++ + L + +  + +     T+  LIN         +  + +
Sbjct: 272 DRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKII 331

Query: 461 KQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMK 520
           + +++  + P    Y  +I G C++G+V+E   I  ++ ++  + + VT+++L+     K
Sbjct: 332 QFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKK 391

Query: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G + EA ++  ++  IG   D I  + LI    K G    A  +
Sbjct: 392 GLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEV 435



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 104/203 (51%), Gaps = 4/203 (1%)

Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
           PS++ ++ L + + +   +  A Y+  +M S      V T+ SL+ G       +  L+L
Sbjct: 133 PSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGL---RMTDMALEL 189

Query: 425 CDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND-LVPKPFMYNPVIDGFC 483
            +EM+   +S + Y+ +I+I+ LCK++++ +A  FL++ +  +   P    +N ++   C
Sbjct: 190 FEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALC 249

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
             G +  A   +  M +    PD+ T++ LI G C  G + EA+ +F ++   G   + +
Sbjct: 250 NWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETV 309

Query: 544 TVNSLISCLLKGGMPNEAFRIMQ 566
           T NSLI+     G+  E  +I+Q
Sbjct: 310 TYNSLINGYRLLGLTREVPKIIQ 332



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 1/295 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+V+    ++G   +   ++D +   G  P        +    + G   AA+      +
Sbjct: 487 YNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQ 546

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  +   Y +L++AL +    +  + +  E      +P+  T++++I+GL +     
Sbjct: 547 ISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFH 606

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A  F  +M   G + D VTYNTLI G C V ++     +   + +     P  VTY  +
Sbjct: 607 DAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVY-CGIVPTPVTYNFL 665

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I+  C  G++ +A  +   +   GI+     +  LI      G    A  +  ++L  G+
Sbjct: 666 INVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGF 725

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
              V  FS+ I+  C+     + +     M    + P+   + +L+ AL K   L
Sbjct: 726 ETTVKDFSAAINRLCKRKFAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKEL 780



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 6/174 (3%)

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND-ARR 458
           P  + + +L + Y R   ++  L +  +M   N+  +V T+  L+  L    R+ D A  
Sbjct: 133 PSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGL----RMTDMALE 188

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE-KRCKPDKVTFTILIIGH 517
             ++++   +    + ++ +IDG CK   V EA   + E  + +R KP  ++F +L+   
Sbjct: 189 LFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSAL 248

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
           C  G +  A S    ML+ G  PD  T ++LI  L K G  +EA  + +R +E+
Sbjct: 249 CNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEE 302


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 188/408 (46%), Gaps = 37/408 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F  FS  + SL H F +Y L+   L E  +      +F  +R++G  P+S  +   +   
Sbjct: 96  FSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
           ++            QFR   VT++ F     LN L                FR    P  
Sbjct: 155 VKT----------KQFR---VTINVF-----LNILESD-------------FR----PSK 179

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           + +   IQ   ++ +V K  E F  M      P +  YN LI GLC+   +    +L  E
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +       P ++TY ++I GYCK G  +K+  +   M +  I+PS +TFN L+ G  K G
Sbjct: 240 M-LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
            +  AE + + M   G++PD  TFS L DGY  N +    L + +      +  N YT +
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           IL+NALCKE ++  A   L +     LVP   +YN +IDG+C+ G++  A + +  ME++
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418

Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
             KPD + +  LI   C  G M  A    NKM   G +P   T N LI
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 193/392 (49%), Gaps = 1/392 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN+++  LC+    +  + +FD M +   LP+       +    +AG  + +  +  + +
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  S   +N+LL  L K    ++A  + KE   L   PD +TF+IL  G S   + +
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A   +      G   +  T + L++ LC+  ++ +  E+L     K    P+ V Y ++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNTM 395

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I GYC+ G +  A      M   G+KP  + +N LI  F ++G M +AE    +M   G 
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P V T++ LI GY R  + ++   +  EM+     PNV ++  LIN LCK ++L +A+ 
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             + ++   + PK  +YN +IDG C  G +++A     EM +K  + + VT+  LI G  
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           M G++ EA  +  ++ R G  PD  T NSLIS
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 198/403 (49%), Gaps = 1/403 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  TYN ++   C+ G  +    V + M++D   P+       +    +AG  + A+ +L
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            + +        F ++ L +       A+ A+ +++       + + +T +IL+  L + 
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+++KA E      + G  P+ V YNT+I G CR  ++  G  +  E   K    PD + 
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV-GARMKIEAMEKQGMKPDHLA 426

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I  +C+LG+M+ A    N+M   G+ PS  T+N+LI G+G+         + + M 
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G +P+VV++ +LI+  C+  +L +   +  +M+ + +SP V  + +LI+  C + ++ 
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA RF K++    +      YN +IDG    G + EA  ++ E+  K  KPD  T+  LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
            G+   G +   I+++ +M R G  P   T + LIS   K G+
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 183/397 (46%), Gaps = 7/397 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN ++R  CE+G  ++ +   + M+  G  P+       +    R  + D    +L + 
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +   Y +L+N L K +   EA  + ++       P    +N+LI G    G++
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           + AF F  +M   G   ++VTYNTLI GL    +++   +LL E+  K    PDV TY S
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG-LKPDVFTYNS 604

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISGY   G + +   +Y EM   GIKP+  T+++LI    K G  ++     E  L   
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK-- 662

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++ ++ ++  Y  +G + +   L  +M  K++  +  T+  LI    K  +L + R
Sbjct: 663 --PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVR 720

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++   ++ P+   YN ++ G C+  +   A V   EM+EK    D      L+ G 
Sbjct: 721 SLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             + R  EA  + ++M   G    D+TV+  +S   K
Sbjct: 781 KEEWRSKEAEIVISEM--NGRMLGDVTVDEDLSATEK 815



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 189/438 (43%), Gaps = 38/438 (8%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T ++++ +LC+ G  +  + +     + G +PN  +    +    R G    A+  +   
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415

Query: 218 RPGEVTMSTFMYNSLLN---ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
               +      YN L+     L +  NA++ V   K   +  S P   T+NILI G  R 
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK--LKGVS-PSVETYNILIGGYGRK 472

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
            E  K F+   +M   G  P++V+Y TLI+ LC+ +++     + ++++ +   SP V  
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG-VSPKVRI 531

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I G C  GK++ A     EM   GI+ + VT+N LIDG    G +  AE +   + 
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN--- 451
             G  PDV T++SLI GY   G + + + L +EMK   + P + T+ +LI+   KE    
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651

Query: 452 ----------------------------RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
                                        +  A    KQ+    +      YN +I G  
Sbjct: 652 TERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           K G + E   ++ EM  +  +P+  T+ I++ GHC     + A   + +M   G   D  
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVC 771

Query: 544 TVNSLISCLLKGGMPNEA 561
             N L+S L +     EA
Sbjct: 772 IGNELVSGLKEEWRSKEA 789



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 79/174 (45%)

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P   + + L+D   +  Q    + +   +   +  P+ + +   I A  K + +   
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
                ++K + + P  F+YN +IDG CK   +++A  +  EM  +R  P  +T+  LI G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +C  G   ++  +  +M      P  IT N+L+  L K GM  +A  +++   +
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%)

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           ++ + + P+  + T+L++ L K  +          +  +D  P  FMY   I    K  +
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
           V +   +   M+  R  P    + +LI G C   RM +A  +F++ML     P  IT N+
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254

Query: 548 LISCLLKGGMPNEAFRIMQRASEDQ 572
           LI    K G P ++F++ +R   D 
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADH 279


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 207/464 (44%), Gaps = 41/464 (8%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL--- 213
           + +   +R L   G  D VQ+    MR  G       +   V +  RAG  D A      
Sbjct: 56  RAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYR 115

Query: 214 ----LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
               L   RP E      +YN L++AL+++N     V ++    +    P+ +T+N+L++
Sbjct: 116 AVHDLGCARPTE----PRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVR 171

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL---------- 319
            L +   V  A +   +M   GC PD VTY T++S LC+++ +    E+L          
Sbjct: 172 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASY 231

Query: 320 --------KEVKFKSEFS-----------PDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
                   +E + +  FS           P+V+TYT+++  +CK G++  A  I   M  
Sbjct: 232 NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVI 291

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G  P+ VTF  L+ G    G +  A  M   M++ G+ P  V+++ LI G C  G L  
Sbjct: 292 TGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKG 351

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
              + + M+     PNV T++ LI+   K   L  A      +  +   P   +Y  ++D
Sbjct: 352 ASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD 411

Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
            FCK    ++A  ++ +M  + C P+ VTF  LI   C   R+  A+ +F++M R GC P
Sbjct: 412 VFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVP 471

Query: 541 DDITVNSLISCLLKGGMPNEAFR-IMQRASEDQNLQLPSWKKAV 583
           +  T N LI  L + G   +A   + +  S    L L ++   V
Sbjct: 472 NGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 515



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 191/401 (47%), Gaps = 10/401 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++R+LC+     + + + D M   G  P+       VS   +  + D A  +L+  
Sbjct: 165 TYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 224

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P   +     YN+++ AL ++    E   +  +      QP+  T+  ++    + GE+
Sbjct: 225 PPVAAS-----YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGEL 279

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF--KSEFSPDVVTY 335
           + A      M   GC+P++VT+  L+ GL    +  R H+ L   ++     ++P  V+Y
Sbjct: 280 RMACAILARMVITGCTPNVVTFTALVRGL---FDDGRVHDALDMWRWMVAEGWAPSTVSY 336

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I G C +G +  A+ I N M   G  P+  T++ LIDGF K G++  A  +   M  
Sbjct: 337 NILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSR 396

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+VV +++++D +C+    NQ   L D+M  +N  PN  TF  LI +LC   R+  
Sbjct: 397 SGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGR 456

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     +++ +  VP    YN +I G  + GN  +A  +V EM+    +   VT+  ++ 
Sbjct: 457 ALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVS 516

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           G C      EA+    KM+  G  P+  T +++I    K G
Sbjct: 517 GLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEG 557



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 191/406 (47%), Gaps = 6/406 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + YN ++ +L    +  +V +V+D MR DG  PN       V +  +  +  AA+ +L +
Sbjct: 129 RLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDE 188

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                       Y ++++ L K +  DEA  +          P   ++N ++  L R   
Sbjct: 189 MARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFR 243

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++ F    DM   G  P+++TY T++   C+  E+     +L  +   +  +P+VVT+T
Sbjct: 244 MQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVI-TGCTPNVVTFT 302

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G    G++  A  ++  M + G  PS V++N+LI G   VG++  A  +   M   
Sbjct: 303 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 362

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+V T+S+LIDG+ + G L   + + ++M      PNV  +T +++  CK+   N A
Sbjct: 363 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQA 422

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           +  + ++   +  P    +N +I   C    V  A  +  EM    C P+  T+  LI G
Sbjct: 423 KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHG 482

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
              +G   +A+ +  +M   G     +T N+++S L +  M  EA 
Sbjct: 483 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 528



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 194/407 (47%), Gaps = 3/407 (0%)

Query: 144 EFSRVNLSLNHSFKTYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCI 202
           E + V  ++     +YN ++ +LC E  + +   VV D M   G  PN       V +  
Sbjct: 216 EATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSD-MVGRGLQPNVITYTTIVDAFC 274

Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           +AG+   A  +L++      T +   + +L+  L       +A+ M++        P T 
Sbjct: 275 KAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTV 334

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           ++NILI+GL  +G++K A      M   GC P++ TY+TLI G  +  ++     +  ++
Sbjct: 335 SYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 394

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +S   P+VV YT+++  +CK    ++A  + ++M      P+ VTFN LI        
Sbjct: 395 S-RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRR 453

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  +   M   G +P+  T++ LI G  R G     L +  EM+   +  ++ T+  
Sbjct: 454 VGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNT 513

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +++ LC+     +A  F+ ++    + P  F ++ +I  +CK G V  A  ++  M    
Sbjct: 514 VVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVN 573

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           C  + + +TIL+   C + ++V+A++   KML  G  P+ +T N L+
Sbjct: 574 CHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 620



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 137/328 (41%), Gaps = 38/328 (11%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  +YN+++R LC +G       + + M   G  PN       +    +AG    A  + 
Sbjct: 332 STVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIW 391

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +         +  +Y ++++   K+   ++A  +  +       P+T TFN LI+ L   
Sbjct: 392 NDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDC 451

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVV 333
             V +A   F++M   GC P+  TYN LI GL R         ++ E++    E S  +V
Sbjct: 452 RRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS--LV 509

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY +V+SG C+     +A     +M   GI+P+A TF+ +I                   
Sbjct: 510 TYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII------------------- 550

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
                             YC+ G++     +   M   N   N+  +TIL+  LC +++L
Sbjct: 551 ----------------HAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKL 594

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDG 481
            DA  +L ++ +  + P    +N ++ G
Sbjct: 595 VDAMTYLLKMLYEGIYPNTVTWNVLVRG 622


>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
          Length = 528

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++P+    +S+  RA   DAA  LL+  +   +T  +    +L+++L       EA  +
Sbjct: 86  PDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEAL 145

Query: 249 FKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           F E+F     +P T  +N L++G  +IG +K A +   +M   G +PD  TY+ L+    
Sbjct: 146 FLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 205

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           R         LLKE++      P    ++ +++G+   G+  KA  +  EM++ G++P  
Sbjct: 206 RAGRWESARILLKEMEADG-VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDR 264

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             +NV+ID FGK   +  A    +RM   G  PDVVT+++LID +C+ G+ ++ ++L DE
Sbjct: 265 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 324

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+  N      T+ I+IN L +E R       L ++K   LVP    Y  ++D + ++G 
Sbjct: 325 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGR 384

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             EA   +  M+    KP    +  L+  +  +G    A+++   M   G     + +NS
Sbjct: 385 FKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 444

Query: 548 LISCLLKGGMPNEAFRIMQ 566
           LI+   +     EAF ++Q
Sbjct: 445 LINAFGEDRRIAEAFSVLQ 463



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 180/401 (44%), Gaps = 39/401 (9%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FLEF      +    + YN +++   ++G   + + V D M   G  P+       V + 
Sbjct: 146 FLEFFLAG-EIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 204

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            RAG+ ++A+ LL +     V                                   +P +
Sbjct: 205 TRAGRWESARILLKEMEADGV-----------------------------------KPSS 229

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
           + F+ ++ G    GE +KAF    +M + G  PD   YN +I    + N +  GH +   
Sbjct: 230 YVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL--GHAMDAF 287

Query: 322 VKFKSE-FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            + + E   PDVVT+ ++I  +CK G+ D+A  +++EM          T+N++I+  G+ 
Sbjct: 288 DRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEE 347

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
                 E M   M   G +P+++T+++L+D Y R+G+  + +   + MK   L P+   +
Sbjct: 348 QRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMY 407

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             L+NA  +    + A   +K ++ + L     + N +I+ F +   + EA  ++  M+E
Sbjct: 408 HALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 467

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
              +PD +T+T L+       +  +   I+ +M+  GCAPD
Sbjct: 468 NGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPD 508



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 4/316 (1%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           +PD   F+ LI   +R      A E      + G +P       LIS L     VA    
Sbjct: 85  EPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEA 144

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L  E     E  P    Y +++ GY K+G +  A  + +EM+ CG+ P   T+++L+D +
Sbjct: 145 LFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 204

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            + G   SA  + + M + G  P    FS ++ G+   G+  +   +  EM    + P+ 
Sbjct: 205 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDR 264

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           + + ++I+   K N L  A     +++   + P    +N +ID  CK G  D A  +  E
Sbjct: 265 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 324

Query: 498 MEEKRCKPDKVTFTILI--IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
           M E  C     T+ I+I  +G   +   VEA  +  +M   G  P+ IT  +L+    + 
Sbjct: 325 MRESNCPLGTTTYNIMINLLGEEQRWEGVEA--MLAEMKEQGLVPNIITYTTLVDVYGRS 382

Query: 556 GMPNEAFRIMQRASED 571
           G   EA   ++    D
Sbjct: 383 GRFKEAVDCIEAMKAD 398



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 143/346 (41%), Gaps = 54/346 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+L++ +    G  +S +++   M +DG  P+S +    ++     G+   A  +L + 
Sbjct: 196 TYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREM 255

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V      YN +++   K N    A+  F        +PD  T+N LI    + G  
Sbjct: 256 HASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRH 315

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F +M    C     TYN +I+ L           +L E+K +    P+++TYT+
Sbjct: 316 DRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMK-EQGLVPNIITYTT 374

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG------NMVSA----- 386
           ++  Y + G+  +A      M + G+KPS+  ++ L++ + + G      N+V A     
Sbjct: 375 LVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADG 434

Query: 387 ----------------------------EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
                                       ++M+E     G  PDV+T+++L+    R  Q 
Sbjct: 435 LEASTVVLNSLINAFGEDRRIAEAFSVLQFMKEN----GLRPDVITYTTLMKALIRVEQF 490

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
            +   + +EM     +P+     +L +AL          R++K ++
Sbjct: 491 EKVPVIYEEMITSGCAPDRKARAMLRSAL----------RYMKHMR 526



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 2/148 (1%)

Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
           L P+   F+ LI+A  +    + A   L   +   L P+      +I     A  V EA 
Sbjct: 84  LEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAE 143

Query: 493 VIVAE-MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
            +  E       KP    +  L+ G+   G +  A  + ++M + G APD+ T + L+  
Sbjct: 144 ALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDA 203

Query: 552 LLKGGMPNEAFRIMQRASEDQNLQLPSW 579
             + G   E+ RI+ +  E   ++  S+
Sbjct: 204 YTRAGR-WESARILLKEMEADGVKPSSY 230


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 166/307 (54%), Gaps = 4/307 (1%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D  ++N+LI G  + GE+++A      MG    SP+  TY+ ++  LC   ++ +  ++L
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLDRMG---VSPNAATYDAVLCSLCDRGKLKQAMQVL 204

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
              + +S+  PDVVT T +I   CK   + +A  ++NEM + G KP  VT+NVLI GF K
Sbjct: 205 GR-QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCK 263

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +  A    +++ S+G  PDV++ + ++   C  G+    +KL   M  K   P+V T
Sbjct: 264 GGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVT 323

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F ILIN LC++  L  A   L+ +  +   P    +NP+I GFC    +D A   +  M 
Sbjct: 324 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
            + C PD VT+ IL+   C  G++ +A+ I +++   GC+P  I+ N++I  LLK G   
Sbjct: 384 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 443

Query: 560 EAFRIMQ 566
            A  +++
Sbjct: 444 LAVELLE 450



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 200/416 (48%), Gaps = 5/416 (1%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           G +FLE+   N   +        ++R  C++G   +   +   +   G + +       +
Sbjct: 98  GSRFLEY-MTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLI 156

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           S   ++G+ + A  +L +     V+ +   Y+++L +L  +    +A+ +     +    
Sbjct: 157 SGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCY 213

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  T  +LI    +   V +A + F +M + GC PD+VTYN LI G C+   +      
Sbjct: 214 PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRF 273

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           LK++       PDV+++  ++   C  G+   A  +   M   G  PS VTFN+LI+   
Sbjct: 274 LKKLP-SYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLC 332

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           + G +  A  + E M   G+ P+  +F+ LI G+C    +++ ++  + M  +   P++ 
Sbjct: 333 QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIV 392

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T+ IL+ ALCK+ +++DA   L QL      P    YN VIDG  K G  + A  ++ EM
Sbjct: 393 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 452

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
             K  KPD +T T ++ G   +G++ EA+  F+ + R    P+    NS+I+ L K
Sbjct: 453 CYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCK 508



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 195/418 (46%), Gaps = 7/418 (1%)

Query: 147 RVNLSLNHSFKTYNLV-MRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           RVN SLN  F+   +  +R L   G  +      +YM + G  P+       +    + G
Sbjct: 71  RVNTSLN--FEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIG 128

Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           +   A  ++         +    YN L++   K    +EA+ +     R+   P+  T++
Sbjct: 129 RTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLD---RMGVSPNAATYD 185

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
            ++  L   G++K+A +         C PD+VT   LI   C+ + V +  +L  E++ K
Sbjct: 186 AVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNK 245

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
               PDVVTY  +I G+CK G++D+A     ++ S G +P  ++ N+++      G  + 
Sbjct: 246 G-CKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMD 304

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A  +   ML  G LP VVTF+ LI+  C+ G L + L + + M     +PN  +F  LI 
Sbjct: 305 AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQ 364

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             C    ++ A  +L+ +      P    YN ++   CK G VD+A VI++++  K C P
Sbjct: 365 GFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSP 424

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
             +++  +I G    G+   A+ +  +M   G  PD IT  S++  L + G   EA +
Sbjct: 425 SLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMK 482



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 193/394 (48%), Gaps = 5/394 (1%)

Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
             R+ +S N +  TY+ V+ SLC+ G L  ++QV+   ++S  + P+       + +  +
Sbjct: 172 LDRMGVSPNAA--TYDAVLCSLCDRGKLKQAMQVLGRQLQSKCY-PDVVTCTVLIDATCK 228

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
                 A  L ++ R          YN L+    K    DEA+   K+      QPD  +
Sbjct: 229 ESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVIS 288

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
            N++++ L   G    A +    M   GC P +VT+N LI+ LC+   + +   +L E+ 
Sbjct: 289 HNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVL-EMM 347

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            K   +P+  ++  +I G+C    +D+A      M S G  P  VT+N+L+    K G +
Sbjct: 348 PKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKV 407

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  +  ++ S G  P +++++++IDG  + G+    ++L +EM  K L P++ T T +
Sbjct: 408 DDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSV 467

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           +  L +E ++ +A +F   LK   + P  F+YN +I G CK+     A   +A+M  K C
Sbjct: 468 VGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGC 527

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           KP + T+T LI G   +G   +A  + N++   G
Sbjct: 528 KPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 8/409 (1%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+++   C+ G  +    V D M   G  PN+   +  + S    GK   A  +L + 
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              +          L++A  K++   +A+ +F E      +PD  T+N+LI+G  + G +
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A  F   + S+GC PD++++N ++  LC         +LL  +  K    P VVT+  
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCL-PSVVTFNI 326

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF--GKVGNMVSAEYMRERMLS 395
           +I+  C+ G + KA  +   M   G  P++ +FN LI GF  GK G   + EY+ E M+S
Sbjct: 327 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGK-GIDRAIEYL-EIMVS 384

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  PD+VT++ L+   C++G+++  + +  ++  K  SP++ ++  +I+ L K  +   
Sbjct: 385 RGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAEL 444

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A   L+++ +  L P       V+ G  + G V EA      ++    +P+   +  +I 
Sbjct: 445 AVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIIT 504

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           G C   +   AI     M+  GC P + T  +LI  +   G+  +A ++
Sbjct: 505 GLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 3/318 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAKGLLSQ 216
           TYN++++  C+ G  D        + S G  P+       + S    G+  DA K L + 
Sbjct: 253 TYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATM 312

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R G +  S   +N L+N L ++    +A+ + +   +    P++ +FN LIQG      
Sbjct: 313 LRKGCLP-SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKG 371

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           + +A E+   M S GC PDIVTYN L++ LC+  +V     +L ++  K   SP +++Y 
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG-CSPSLISYN 430

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +VI G  K+GK + A  +  EM   G+KP  +T   ++ G  + G +  A      +  F
Sbjct: 431 TVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRF 490

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
              P+   ++S+I G C++ Q +  +    +M  K   P   T+T LI  +  E    DA
Sbjct: 491 AIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDA 550

Query: 457 RRFLKQLKWNDLVPKPFM 474
            +   +L    LV +  +
Sbjct: 551 SKLSNELYSRGLVKRSLV 568



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 36/244 (14%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS----PMIEFF------------- 197
           S  T+N+++  LC+ GL      V + M   GH PNS    P+I+ F             
Sbjct: 320 SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYL 379

Query: 198 ------------------VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
                             +++  + GK D A  +LSQ      + S   YN++++ L+K 
Sbjct: 380 EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKV 439

Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
             A+ AV + +E      +PD  T   ++ GLSR G+V++A +FF+ +  F   P+   Y
Sbjct: 440 GKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIY 499

Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
           N++I+GLC+  + +   + L ++  K    P   TYT++I G    G  + A+ + NE+ 
Sbjct: 500 NSIITGLCKSQQTSLAIDFLADMVAKG-CKPTEATYTTLIKGITYEGLAEDASKLSNELY 558

Query: 360 SCGI 363
           S G+
Sbjct: 559 SRGL 562



 Score = 38.9 bits (89), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 37/90 (41%)

Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
           + G ++E +  +  M  K   PD +  T LI   C  GR   A  I   +   G   D  
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 544 TVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           + N LIS   K G   EA R++ R     N
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRMGVSPN 180


>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
 gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
          Length = 445

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 184/371 (49%), Gaps = 12/371 (3%)

Query: 204 AGKCDAAKGLLSQFR-----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           AG+ D AK L+ +F+     PG + +   ++N +L    +    DEA        R+  +
Sbjct: 27  AGEFDEAKRLVEEFKDTGMSPGSLVV---LHNLMLKGFSEAGFVDEAK---SHLHRMDCK 80

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P++ ++N LI  L   G +++A E    M   G +P+ VTYN + +GL +   +    EL
Sbjct: 81  PNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGLLDEAFEL 140

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           +  V   + F+   VT+  V+   CK G+ D+A  +   M    I+P+ +T N+++  F 
Sbjct: 141 MG-VMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAFC 199

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K      A  M + M+  G+ P +VTF++L++ +C   Q++   KL + M      PN  
Sbjct: 200 KAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFV 259

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
           T++I++    +  R+ +AR FL+QL      P   + N  + G CK G +D A+  +  M
Sbjct: 260 TYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVM 319

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
            E+ C+ +  T+  L+ G C  GRM EA  +  +M+  G  PD  T + LI  L   G  
Sbjct: 320 AEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQI 379

Query: 559 NEAFRIMQRAS 569
             AF +M + +
Sbjct: 380 EHAFMVMLQVT 390


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 195/412 (47%), Gaps = 4/412 (0%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLL 214
           +YN +++  C E    ++++++     S G    PN       ++     G+ D A  L 
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLF 226

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +     +  +   Y ++++ L K    D A  +F++      +PD  T+N LI G   I
Sbjct: 227 LEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSI 286

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G+ K+      +M + G  PD  TY +L++ LC  N   R      +   +    P+V  
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN-NGRCREARFFFDSMIRKGIKPNVAI 345

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +I GY   G + +   + N M   G+ P    FN++   + K   +  A ++  +M 
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  PDVV F +LID  C+ G+++  +   ++M  + ++PN++ F  L+  LC  ++  
Sbjct: 406 QQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWE 465

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
            A+ F  ++    + P    +N ++   C  G V +A  ++  ME    +PD +++T LI
Sbjct: 466 KAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLI 525

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            GHC+ GR+ EA    + ML +G  PD+ T N+L+    + G  ++A+ + +
Sbjct: 526 GGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 198/423 (46%), Gaps = 2/423 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+  LC+  + D  + VF  M   G  P++      +   +  GK      +L + 
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    + Y SLLN L       EA + F    R   +P+   + ILI G +  G +
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGAL 359

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +  +    M   G SPD   +N + +   +   +     +  ++K +   SPDVV + +
Sbjct: 360 SEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK-QQGLSPDVVNFGA 418

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I   CKLG++D A   +N+M + G+ P+   FN L+ G   V     A+     ML+ G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PDVV F++++   C  GQ+ +  +L D M+     P+V ++T LI   C   R+++A 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
           + L  +    L P  + YN ++ G+C+AG +D+A  +  EM      P  VT++ ++ G 
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR-ASEDQNLQL 576
               R  EA  ++  M+  G   +    N +++ L K    +EAF++ Q   S+D  L++
Sbjct: 599 FTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEI 658

Query: 577 PSW 579
            ++
Sbjct: 659 TTF 661



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 193/422 (45%), Gaps = 58/422 (13%)

Query: 194 IEFFVSSCIRAGKC---DAAK---GLLSQFRPGEVTMSTFMYNSLLNALVK-------QN 240
           +E  + S  R+G     DA K   GLL+  RP     S   +N LL A+ +         
Sbjct: 15  LERVIGSRARSGSLGLDDALKLFDGLLTHARPA----SIIAFNHLLTAVSRVSGRRSSTT 70

Query: 241 NADEAVYMFKEYFR---LYSQPDTWTFNILIQGLSRIGEVKKAFEFF------------- 284
            ++  V +F    R   +   PD  T++ILI    R+G ++  F  F             
Sbjct: 71  ESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI 130

Query: 285 -----------------------YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
                                    M   GC+PD+V+YNTL+ G C         ELL  
Sbjct: 131 VINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHM 190

Query: 322 VKFKSEFS--PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +      S  P+VV+Y +VI+G+   G++DKA  ++ EM   GI+P+ VT+  +IDG  K
Sbjct: 191 MADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
              +  AE + ++M+  G  PD  T++ LI GY   G+  + +++ +EM    L P+ YT
Sbjct: 251 AQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           +  L+N LC   R  +AR F   +    + P   +Y  +I G+   G + E + ++  M 
Sbjct: 311 YGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMV 370

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E    PD   F I+   +  K  + EA+ IFNKM + G +PD +   +LI  L K G  +
Sbjct: 371 ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVD 430

Query: 560 EA 561
           +A
Sbjct: 431 DA 432



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 161/324 (49%), Gaps = 5/324 (1%)

Query: 230 NSLLNALVKQNNADEAV-YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           N LL  L       EA+  + K    L   PD  ++N L++G       ++A E  + M 
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192

Query: 289 SF---GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
                 C P++V+Y T+I+G     +V + + L  E+  +    P+VVTYT+VI G CK 
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRG-IQPNVVTYTTVIDGLCKA 251

Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
             +D+A G++ +M   G+KP   T+N LI G+  +G       M E M + G  PD  T+
Sbjct: 252 QVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTY 311

Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
            SL++  C NG+  +     D M  K + PNV  + ILI+    +  L++    L  +  
Sbjct: 312 GSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVE 371

Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
           N L P   ++N +   + K   +DEA  I  +M+++   PD V F  LI   C  GR+ +
Sbjct: 372 NGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDD 431

Query: 526 AISIFNKMLRIGCAPDDITVNSLI 549
           A+  FN+M+  G AP+    NSL+
Sbjct: 432 AVLKFNQMMNEGVAPNIFVFNSLV 455



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 213/443 (48%), Gaps = 2/443 (0%)

Query: 141 KFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           +F   S +   +  +   Y +++      G    +  + + M  +G  P+  +     ++
Sbjct: 328 RFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             +    D A  + ++ +   ++     + +L++AL K    D+AV  F +       P+
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
            + FN L+ GL  + + +KA EF+++M + G  PD+V +NT++  LC   +V +   L+ 
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            ++ +    PDV++YT++I G+C +G++D+A    + M S G+KP   T+N L+ G+ + 
Sbjct: 508 LME-RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRA 566

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
           G +  A  +   ML  G  P VVT+S+++ G     + ++  +L   M       N++ +
Sbjct: 567 GRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIY 626

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
            I++N L K N +++A +  + L   D   +   +N +I    K+G  ++A  + A +  
Sbjct: 627 NIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
               PD  T+ ++      +G + E   +F+ M + G  P+   +N+L+  LL  G    
Sbjct: 687 YGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITR 746

Query: 561 AFRIMQRASEDQNLQLPSWKKAV 583
           A   + +  E +N  L +   A+
Sbjct: 747 AGAYLSKLDE-KNFSLEASTTAM 768



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 197/430 (45%), Gaps = 15/430 (3%)

Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
           LS +H    +N++  +  +  + D    +F+ M+  G  P+       + +  + G+ D 
Sbjct: 374 LSPDHHI--FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDD 431

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
           A    +Q     V  + F++NSL+  L   +  ++A   + E      +PD   FN ++ 
Sbjct: 432 AVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILC 491

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKS 326
            L   G+V KA      M   G  PD+++Y TLI G C   R++E A+  +++  V  K 
Sbjct: 492 NLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLK- 550

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              PD  TY +++ GYC+ G++D A G++ EM   GI P  VT++ ++ G         A
Sbjct: 551 ---PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + +   M++ G   ++  ++ +++G  +N  +++  KL   +  K+    + TF I+I A
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           L K  R  DA      +    LVP  F Y  + +   + G ++E + + + ME+    P+
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA----- 561
                 L+     +G +  A +  +K+     + +  T   LIS L +    + A     
Sbjct: 728 SRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPE 787

Query: 562 -FRIMQRASE 570
            +R++  A +
Sbjct: 788 KYRVLNEAKK 797



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 1/111 (0%)

Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
           + P    Y+ +I  FC+ G ++        + +   + + +    L+ G C   R+ EA+
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 528 SIF-NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
            I   +M  +GC PD ++ N+L+          EA  ++   ++ Q    P
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCP 200


>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 548

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 2/299 (0%)

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           +LY  PD  + NIL++GL  + ++  A +   +M  +G  PD+VTY T++S  C   ++ 
Sbjct: 198 KLYITPDLVSCNILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLK 257

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              +L  ++       PDV  YT +I GYC+ GK+  A  I +EM + G++P+ VT++V+
Sbjct: 258 GAQKLFDDIIAGGRV-PDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVV 316

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           I+   K G    A  +   ML  G+ PD    + ++D  C++G+  +  ++   M  KN+
Sbjct: 317 IEACCKEGKSAEACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNV 376

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
            P+      LI  LCK   + +AR+   +L+     P    YN +I G C+ G + EA  
Sbjct: 377 PPDNTITNTLIYWLCKSGMVREARKLFDELE-KGYKPSLLTYNSLISGLCENGELQEAGK 435

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +  +M E+R +P+ +T+  LI G C  G+  E  ++F +M+  GCAP  +    L+  L
Sbjct: 436 VWDDMVERRYEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSL 494



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 1/282 (0%)

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
            F  + SF   P + ++N L+  L     +     L +    K   +PD+V+   ++ G 
Sbjct: 156 LFLSLPSFNSHPSVRSFNALLHSLVAARRLRLAAALFRAAPTKLYITPDLVSCNILLKGL 215

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
             +  +D A  + +EM   GI P  VT+  ++  +    ++  A+ + + +++ G +PDV
Sbjct: 216 VGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDV 275

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
             ++ LIDGYCR G++    ++ DEM+   + PN  T++++I A CKE +  +A   +++
Sbjct: 276 TMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMRE 335

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +      P   +   V+D  C+ G  +EA+ +   M +K   PD      LI   C  G 
Sbjct: 336 MLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGM 395

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           + EA  +F++ L  G  P  +T NSLIS L + G   EA ++
Sbjct: 396 VREARKLFDE-LEKGYKPSLLTYNSLISGLCENGELQEAGKV 436



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 142/272 (52%), Gaps = 2/272 (0%)

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           +PD+V+ N L+ GL  V ++    ++L E+       PDVVTYT+V+S YC    +  A 
Sbjct: 202 TPDLVSCNILLKGLVGVRDLDAALKVLDEMPGWG-IVPDVVTYTTVLSAYCAKEDLKGAQ 260

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            +++++ + G  P    + VLIDG+ + G +  A  + + M + G  P+ VT+S +I+  
Sbjct: 261 KLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEAC 320

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C+ G+  +   L  EM G   +P+      +++ +C++ +  +A +  + +   ++ P  
Sbjct: 321 CKEGKSAEACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDN 380

Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
            + N +I   CK+G V EA  +  E+E K  KP  +T+  LI G C  G + EA  +++ 
Sbjct: 381 TITNTLIYWLCKSGMVREARKLFDELE-KGYKPSLLTYNSLISGLCENGELQEAGKVWDD 439

Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
           M+     P+ +T  +LI    K G P+E   +
Sbjct: 440 MVERRYEPNAMTYEALIKGFCKIGKPDEGAAV 471



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 37/307 (12%)

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           DAA  +L +     +      Y ++L+A   + +   A  +F +       PD   + +L
Sbjct: 222 DAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVL 281

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  R G+++ A     +M + G  P+ VTY+ +I   C+  + A    L++E+   + 
Sbjct: 282 IDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREM-LGAG 340

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            +PD      V+   C+ GK ++A  ++  M    + P     N LI    K G +  A 
Sbjct: 341 HTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGMVREAR 400

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + +  L  GY P ++T++SLI G C NG+L +  K+ D+M  +   PN  T+  LI   
Sbjct: 401 KLFDE-LEKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIK-- 457

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
                                            GFCK G  DE   +  EM  K C P K
Sbjct: 458 ---------------------------------GFCKIGKPDEGAAVFTEMVTKGCAPSK 484

Query: 508 VTFTILI 514
           V + +L+
Sbjct: 485 VLYQVLV 491



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 2/253 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY  V+ + C        Q +FD + + G +P+  M    +    R GK   A  ++ + 
Sbjct: 242 TYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEM 301

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               V  +   Y+ ++ A  K+  + EA  + +E       PDT     ++  + + G+ 
Sbjct: 302 EAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKA 361

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A + +  M      PD    NTLI  LC+   V    +L  E   +  + P ++TY S
Sbjct: 362 EEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGMVREARKLFDE--LEKGYKPSLLTYNS 419

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +ISG C+ G++ +A  ++++M     +P+A+T+  LI GF K+G       +   M++ G
Sbjct: 420 LISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKG 479

Query: 398 YLPDVVTFSSLID 410
             P  V +  L+D
Sbjct: 480 CAPSKVLYQVLVD 492



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 134/290 (46%), Gaps = 2/290 (0%)

Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
           N++++ L  +   D+   V D M   G +P+       +S+         A+ L      
Sbjct: 209 NILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIA 268

Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
           G       MY  L++   +     +A  +  E      QP+  T++++I+   + G+  +
Sbjct: 269 GGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAE 328

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A     +M   G +PD      ++  +C+  +    H++ + +  K    PD     ++I
Sbjct: 329 ACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWM-VKKNVPPDNTITNTLI 387

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
              CK G + +A  +++E+   G KPS +T+N LI G  + G +  A  + + M+   Y 
Sbjct: 388 YWLCKSGMVREARKLFDELEK-GYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYE 446

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
           P+ +T+ +LI G+C+ G+ ++G  +  EM  K  +P+   + +L+++L +
Sbjct: 447 PNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSLSE 496


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 178/359 (49%), Gaps = 1/359 (0%)

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
             + R     ++ + YN L++ L++     EA+ M++       +P   TF+ L+    +
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGK 241

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
             + +       +M S G  P+I TY   I  L R   +     ++K ++      PDVV
Sbjct: 242 RRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRME-DDGCGPDVV 300

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TYT +I   C  GK+D A  ++ +M +   KP  VT+  ++D F   G++   +     M
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
            + GY PDV+TF+ L++  C+ G +++   L D M+ + + PN++T+  LI+ L + NRL
Sbjct: 361 EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRL 420

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
           +DA      ++   +VP  + Y   ID + K+G  D+A     +M+ +   P+ V     
Sbjct: 421 DDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNAS 480

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +      GR+ EA  IFN++   G APD +T N ++ C  K G  +EA  ++   SE+Q
Sbjct: 481 LYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 200/422 (47%), Gaps = 1/422 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  +     TY ++ + L   G        F  MR  G   N+      +   +++G C 
Sbjct: 152 NQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCR 211

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
            A  +  +     +  S   +++L+ A  K+ + +    + +E   L  +P+ +T+ I I
Sbjct: 212 EALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICI 271

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
           + L R G + +A      M   GC PD+VTY  LI  LC   ++    EL  ++K  S  
Sbjct: 272 RVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMK-ASSH 330

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
            PD VTY +++  +   G + +    ++EM + G  P  +TF +L++   K GN+  A +
Sbjct: 331 KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFH 390

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           + + M   G LP++ T+++LI G  R  +L+  L L + M+   + P  YT+ + I+   
Sbjct: 391 LLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYG 450

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K  R + A    +++K   + P     N  +    + G + EA VI   ++     PD V
Sbjct: 451 KSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSV 510

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           T+ +++  +   G++ EAI + + M    C PD I +NSLI+ L K G  +EA+++  R 
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570

Query: 569 SE 570
            +
Sbjct: 571 KD 572



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 209/418 (50%), Gaps = 1/418 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L  S KT++ +M +  +    ++V+ + + M S G  PN       +    RAG+ D A 
Sbjct: 225 LKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEAC 284

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            ++ +            Y  L++AL      D+A+ +F +      +PD  T+  ++   
Sbjct: 285 RIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKF 344

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           S  G++ +  EF+ +M + G +PD++T+  L++ LC+   +     LL +V  K    P+
Sbjct: 345 SDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLL-DVMRKQGVLPN 403

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           + TY ++ISG  ++ ++D A  ++N M + G+ P+A T+ + ID +GK G    A    E
Sbjct: 404 LHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFE 463

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           +M   G  P++V  ++ +      G+L +   + + +K   L+P+  T+ +++    K  
Sbjct: 464 KMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAG 523

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
           ++++A   L  +  N   P   + N +I+   KAG VDEA  +   +++ +  P  VT+ 
Sbjct: 524 QVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYN 583

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
            LI G   +G++  A+ +F  M   GC P+ IT N+++ CL K    + A +++ + +
Sbjct: 584 TLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMT 641



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 197/409 (48%), Gaps = 2/409 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY +++ +LC  G  D    +F  M++  H P+       +      G     K   S+ 
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                      +  L+NAL K  N DEA ++     +    P+  T+N LI GL R+  +
Sbjct: 361 EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRL 420

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             A + F +M + G  P   TY   I    +     +  E  +++K +   +P++V   +
Sbjct: 421 DDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG-IAPNIVACNA 479

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +    ++G++ +A  I+N + S G+ P +VT+N+++  + K G +  A  +   M    
Sbjct: 480 SLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD++  +SLI+   + G++++  K+   +K   L+P V T+  LI  L KE ++  A 
Sbjct: 540 CEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAM 599

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +  N   P    +N ++D  CK   VD A  ++ +M    C PD +TF  +I G 
Sbjct: 600 ELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGL 659

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            ++ R+ +AI +F++M ++   PD +T+ +L+  ++K G+  +AF+I +
Sbjct: 660 VIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAE 707



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 172/320 (53%), Gaps = 1/320 (0%)

Query: 229  YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
            YN L+   +  +N + A  +F E       PD +T+N+L+    + G++ + FE +  M 
Sbjct: 793  YNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMI 852

Query: 289  SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
               C P+ +T+N +I+ L + N + +  +L  ++    +FSP   TY  ++ G  K G++
Sbjct: 853  CSSCKPNTITHNIIIANLVKSNSLDKALDLFYDL-VSGDFSPTPCTYGPLLDGLLKSGRL 911

Query: 349  DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
            ++A  ++ EM   G +P+   +N+LI+GFGK G++ +A  + +RM+  G  PD+ +++SL
Sbjct: 912  EEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSL 971

Query: 409  IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
            +   C  G+++  L   +++K   L  +   + ++I+ L + +R+ +A     +++   +
Sbjct: 972  VGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGI 1031

Query: 469  VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
             P  F YN +I     AG V++A  +  E++    +P+  T+  LI G+ M G    A +
Sbjct: 1032 NPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYA 1091

Query: 529  IFNKMLRIGCAPDDITVNSL 548
            ++ +M+  GC+P+  T   L
Sbjct: 1092 VYKRMMVGGCSPNTGTFAQL 1111



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 174/337 (51%), Gaps = 2/337 (0%)

Query: 232  LLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
            ++  L K   A  A  +F  + + L  +P   ++N LI+G   +   + A+  F +M + 
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 291  GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
            GC+PD+ TYN L+    +  ++    EL +++   S   P+ +T+  +I+   K   +DK
Sbjct: 820  GCAPDVFTYNLLLDAHGKSGKINELFELYEQM-ICSSCKPNTITHNIIIANLVKSNSLDK 878

Query: 351  ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
            A  ++ ++ S    P+  T+  L+DG  K G +  A+ + E M+ +G  P+   ++ LI+
Sbjct: 879  ALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILIN 938

Query: 411  GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
            G+ + G +N   +L   M  + + P++ ++T L+  LC+  R++DA  + ++LK   L  
Sbjct: 939  GFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYL 998

Query: 471  KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
                YN +IDG  ++  ++EA  +  EM+ +   PD  T+  LI+   + G + +A  ++
Sbjct: 999  DSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLY 1058

Query: 531  NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
             ++  IG  P+  T N+LI      G  + A+ + +R
Sbjct: 1059 EELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKR 1095



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/484 (23%), Positives = 205/484 (42%), Gaps = 72/484 (14%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN++M+   + G  D    +   M  +   P+  +I   +++  +AG+ D A  +  + 
Sbjct: 511 TYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRL 570

Query: 218 R-----PGEVTMSTFM------------------------------YNSLLNALVKQNNA 242
           +     P  VT +T +                              +N++L+ L K +  
Sbjct: 571 KDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEV 630

Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
           D A+ M  +   +   PD  TFN +I GL     V  A   F+ M     +PD VT  TL
Sbjct: 631 DLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTL 689

Query: 303 ISGLCRVNEVARGHELLKEV----------KFKSEFSPDVVTYTS--------------- 337
           + G+ +   +    ++ ++           +F  +    ++T                  
Sbjct: 690 LPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGR 749

Query: 338 ----------VISGYCKLGKMDKATGIYNEMN-SCGIKPSAVTFNVLIDGFGKVGNMVSA 386
                     +I   CK  +   A  ++       G+KP+  ++N LI+GF  V N   A
Sbjct: 750 VCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMA 809

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             +   M + G  PDV T++ L+D + ++G++N+  +L ++M   +  PN  T  I+I  
Sbjct: 810 WNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIAN 869

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           L K N L+ A      L   D  P P  Y P++DG  K+G ++EA  +  EM +  C+P+
Sbjct: 870 LVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPN 929

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
              + ILI G    G +  A  +F +M+R G  PD  +  SL+ CL + G  ++A    +
Sbjct: 930 NAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFE 989

Query: 567 RASE 570
           +  +
Sbjct: 990 KLKQ 993



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 1/288 (0%)

Query: 158  TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            TYNL++ +  + G  + +  +++ M      PN+      +++ +++   D A  L    
Sbjct: 827  TYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDL 886

Query: 218  RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              G+ + +   Y  LL+ L+K    +EA  +F+E      +P+   +NILI G  + G+V
Sbjct: 887  VSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDV 946

Query: 278  KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
              A E F  M   G  PD+ +Y +L+  LC    V       +++K ++    D + Y  
Sbjct: 947  NTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK-QTGLYLDSIAYNL 1005

Query: 338  VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            +I G  +  ++++A  +Y+EM S GI P   T+N LI   G  G +  A  + E +   G
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065

Query: 398  YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
              P+V T+++LI GY  +G  +    +   M     SPN  TF  L N
Sbjct: 1066 LEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 4/224 (1%)

Query: 330 PDVVTYTSVISGYCKLGKMDKATG----IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
           P VV  T   +   ++ ++ +  G    ++N M +  IK    T+ ++  G    G +  
Sbjct: 118 PFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQ 177

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
             +   +M   G+  +  +++ LI    ++G   + L++   M  + L P++ TF+ L+ 
Sbjct: 178 TPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMV 237

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
           A  K       +  L++++   L P  + Y   I    +AG +DEA  I+  ME+  C P
Sbjct: 238 ATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGP 297

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           D VT+T+LI   C  G++ +A+ +F KM      PD +T  +++
Sbjct: 298 DVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITML 341



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 67/147 (45%)

Query: 156  FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
             K+Y  ++  LCE G  D     F+ ++  G   +S      +    R+ + + A  L  
Sbjct: 965  LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024

Query: 216  QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
            + +   +    F YNSL+  L      ++A  +++E   +  +P+ +T+N LI+G S  G
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSG 1084

Query: 276  EVKKAFEFFYDMGSFGCSPDIVTYNTL 302
                A+  +  M   GCSP+  T+  L
Sbjct: 1085 NSDSAYAVYKRMMVGGCSPNTGTFAQL 1111


>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           barbata]
          Length = 429

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 156/287 (54%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRL-KSAM 201

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 202 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRV 261

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++MLS   LPD++T+++LI G C+ G L Q   L DEM  K L  +  T+T L
Sbjct: 262 DLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTL 321

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 322 IDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 381

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T++I   C KG + +   +   M R G AP  +T N L++
Sbjct: 382 KPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMN 428



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 157/288 (54%), Gaps = 1/288 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F     M 
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
           + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK G++
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LXPNGVTFTTLIDGHCKNGRV 261

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D A  IY +M S  + P  +T+N LI G  K G++  A  + + M   G   D +T+++L
Sbjct: 262 DLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTL 321

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           IDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++    L
Sbjct: 322 IDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 381

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            P    Y  +I+ FCK G+V + + ++ +M+     P  VT+ +L+ G
Sbjct: 382 KPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 143/288 (49%), Gaps = 1/288 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           +N++M   C+ G     Q VFD +   G  P+       ++  IR G  +    L S   
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  + G V 
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
            A E +  M S    PD++TYNTLI GLC+  ++ + H+L+ E+  K     D +TYT++
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG-LKXDKITYTTL 321

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G CK G +D A      M    I+   V +  LI G  + G  V AE M   MLS G 
Sbjct: 322 IDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 381

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
            PD  T++ +I+ +C+ G + +G KL  +M+    +P+V T+ +L+N 
Sbjct: 382 KPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 151/290 (52%), Gaps = 1/290 (0%)

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           +++ L ++   K  + F   +   G       +N L+   C+  ++     +   +  K 
Sbjct: 111 VLEHLMKLKYFKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIA-KW 169

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
              P VV+Y ++++GY +LG +++   + + M + G++P   T++VLI+G  K   M  A
Sbjct: 170 GLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 229

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + + ML  G  P+ VTF++LIDG+C+NG+++  +++  +M  ++L P++ T+  LI  
Sbjct: 230 NELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 289

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LCK+  L  A   + ++    L      Y  +IDG CK G++D A      M ++  + D
Sbjct: 290 LCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLD 349

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
            V +T LI G C +GR V+A  +  +ML +G  PD  T   +I+   K G
Sbjct: 350 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKG 399



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 130/225 (57%)

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +CK G +  A  +++ +   G++PS V++N L++G+ ++G++     ++  ML+ G  PD
Sbjct: 150 FCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPD 209

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V T+S LI+G C+  +++   +L DEM  K L PN  TFT LI+  CK  R++ A    K
Sbjct: 210 VYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYK 269

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           Q+    L+P    YN +I G CK G++ +A+ ++ EM  K  K DK+T+T LI G C +G
Sbjct: 270 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEG 329

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
            +  A     +M++     DD+   +LIS L + G   +A ++++
Sbjct: 330 DLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 374



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 9/281 (3%)

Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
           I TY  L SG  R  +    + L +E K +  F     T   V+    KL       G  
Sbjct: 77  ITTY--LESGFLR--DAIECYRLTREHKLRVPFD----TCKKVLEHLMKLKYFKLVWGFX 128

Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
             +   G       FN+L+  F K G++  A+ + + +  +G  P VV++++L++GY R 
Sbjct: 129 XXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRL 188

Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
           G LN+G +L   M    + P+VYT+++LIN LCKE++++DA     ++    L P    +
Sbjct: 189 GDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTF 248

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
             +IDG CK G VD A  I  +M  +   PD +T+  LI G C KG + +A  + ++M  
Sbjct: 249 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 308

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
            G   D IT  +LI    K G  + AF   +R  + +N++L
Sbjct: 309 KGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQ-ENIRL 348



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 1/219 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY++++  LC+    D    +FD M   G  PN       +    + G+ D A  +  Q 
Sbjct: 212 TYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 271

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      YN+L+  L K+ +  +A  +  E      + D  T+  LI G  + G++
Sbjct: 272 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDL 331

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AFE    M       D V Y  LISGLC+        ++L+E+       PD  TYT 
Sbjct: 332 DAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM-LSVGLKPDTXTYTM 390

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
           +I+ +CK G + K + +  +M   G  PS VT+NVL++G
Sbjct: 391 IINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 205/418 (49%), Gaps = 16/418 (3%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
            ++ ++ ++  MG + +   +F  + S G  P+   +   ++          A  LL   
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTI 116

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F+P  VT +T +    +N +V +  A     M K Y       D +++  LI GL 
Sbjct: 117 LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY-----PLDEFSYGSLINGLC 171

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G+ + A +    M      P+++TY+T+I GLC+   +A    L   V  +     DV
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILV-DV 230

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           V Y S+I G C +G+  +AT +   M    I P   TFN+L+D   K G +V A+ +   
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAV 290

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G  PD+VT+++L++G+C +  +++  +L + M  + L P+V  + +LIN  CK + 
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +++A    K+++  +LVP    YN +IDG CK G +     +V EM ++   PD VT+ I
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNI 410

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
            +   C      +AIS+F ++++ G  PD    + ++    KG    E  +I + A +
Sbjct: 411 FLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKG----EKLKIAEEALQ 463



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 168/357 (47%), Gaps = 2/357 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  LC+ G       +   M  D   PN       +    +      A  L S  
Sbjct: 162 SYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLV 221

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               + +    YNSL++         EA  +     R    PD +TFNIL+  L + G +
Sbjct: 222 TSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRI 281

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A   F  M   G  PDIVTYN L+ G C  N V+   EL   +  K    PDV+ Y  
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM-VKRGLEPDVLNYNV 340

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+GYCK+  +D+A  ++ E+    + P+  T+N LIDG  K+G M   + + + M   G
Sbjct: 341 LINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD+VT++  +D +C++    + + L  ++  + + P+ Y + +++   CK  +L  A 
Sbjct: 401 QSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAE 459

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
             L+ L  +   P    Y  +I+  CK  + DEA  ++++M++  C PD VTF  +I
Sbjct: 460 EALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 168/330 (50%), Gaps = 1/330 (0%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F+++ LL A+V+  +   A+ +F +       P   T  ILI        +  AF     
Sbjct: 56  FVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGT 115

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           +   G  P++VT+NTLI+G C    V++      ++  K  +  D  +Y S+I+G CK G
Sbjct: 116 ILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG-YPLDEFSYGSLINGLCKNG 174

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           +   A  +  +M    ++P+ +T++ +IDG  K   +  A  +   + S G L DVV ++
Sbjct: 175 QTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYN 234

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           SLI G C  GQ  +  +L   M   N++P+ YTF IL++ALCKE R+ +A+     +   
Sbjct: 235 SLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKR 294

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
              P    YN +++GFC + NV EA  +   M ++  +PD + + +LI G+C    + EA
Sbjct: 295 GEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEA 354

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           + +F ++      P+  T NSLI  L K G
Sbjct: 355 MVLFKEIRCKNLVPNLATYNSLIDGLCKLG 384



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 2/344 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+ V+  LC+  L      +F  + S G L +       +  C   G+   A  LL+  
Sbjct: 197 TYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMM 256

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
             G +    + +N L++AL K+    EA  +F    +   +PD  T+N L++G      V
Sbjct: 257 VRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNV 316

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F  M   G  PD++ YN LI+G C+++ V     L KE++ K+   P++ TY S
Sbjct: 317 SEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKN-LVPNLATYNS 375

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I G CKLG+M     + +EM   G  P  VT+N+ +D F K      A  +  +++  G
Sbjct: 376 LIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-G 434

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             PD   +  +++ +C+  +L    +    +      PNV T+TI+INALCK+   ++A 
Sbjct: 435 IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAM 494

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
             L ++  ND  P    +  +I    +    D+A  +  EM E+
Sbjct: 495 TLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIER 538



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 35/363 (9%)

Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
           +  F Y SL+N L K     +A+ + ++      +P+  T++ +I GL +   +  A   
Sbjct: 158 LDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRL 217

Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
           F  + S G   D+V YN+LI G C V +      LL  +  +   +PD  T+  ++   C
Sbjct: 218 FSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLT-MMVRGNINPDDYTFNILVDALC 276

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K G++ +A G++  M   G KP  VT+N L++GF    N+  A  +  RM+  G  PDV+
Sbjct: 277 KEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVL 336

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            ++ LI+GYC+   +++ + L  E++ KNL PN+ T+  LI+ LCK  R++  +  + ++
Sbjct: 337 NYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM 396

Query: 464 ----KWNDLV------------------------------PKPFMYNPVIDGFCKAGNVD 489
               +  D+V                              P  +MY+ +++ FCK   + 
Sbjct: 397 CDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLK 456

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            A   +  +    C P+  T+TI+I   C      EA+++ +KM    C PD +T  ++I
Sbjct: 457 IAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516

Query: 550 SCL 552
             L
Sbjct: 517 GAL 519



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 161/324 (49%), Gaps = 1/324 (0%)

Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
           K +  D+ +  F    R +  P  + F+ L+  + R+G    A   F  + S G +P I 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
           T   LI+  C    ++    LL  +  K  F P++VT+ ++I+G+C  G + KA     +
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTI-LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLD 150

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           + + G      ++  LI+G  K G    A  + ++M      P+++T+S++IDG C++  
Sbjct: 151 LMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRL 210

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
           +   L+L   +  + +  +V  +  LI+  C   +  +A R L  +   ++ P  + +N 
Sbjct: 211 IADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNI 270

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++D  CK G + EA  + A M ++  KPD VT+  L+ G C+   + EA  +FN+M++ G
Sbjct: 271 LVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRG 330

Query: 538 CAPDDITVNSLISCLLKGGMPNEA 561
             PD +  N LI+   K  M +EA
Sbjct: 331 LEPDVLNYNVLINGYCKIDMVDEA 354



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 135/274 (49%), Gaps = 1/274 (0%)

Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
           P I  ++ L+  + R+        L  ++  K   +P + T T +I+ YC    +  A  
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKG-ITPSIATLTILINCYCHQAHLSFAFS 111

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           +   +   G +P+ VTFN LI+GF   G +  A   R  +++ GY  D  ++ SLI+G C
Sbjct: 112 LLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLC 171

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
           +NGQ    L+L  +M+   + PN+ T++ +I+ LCK+  + DA R    +    ++    
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
            YN +I G C  G   EA  ++  M      PD  TF IL+   C +GR+VEA  +F  M
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           ++ G  PD +T N+L+         +EA  +  R
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNR 325



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 126/312 (40%), Gaps = 37/312 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++ +LC+ G     Q VF  M   G  P+       +     +     A+ L ++ 
Sbjct: 267 TFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM 326

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +      YN L+N   K +  DEA+ +FKE       P+  T+N LI GL ++G +
Sbjct: 327 VKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRM 386

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
               E   +M   G SPDIVTYN  +   C+     +   L +++       PD   Y  
Sbjct: 387 SCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI--VQGIWPDFYMYDV 444

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           ++  +CK  K+  A                                   E   + +L  G
Sbjct: 445 IVENFCKGEKLKIA-----------------------------------EEALQHLLIHG 469

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P+V T++ +I+  C++   ++ + L  +M   +  P+  TF  +I AL + N  + A 
Sbjct: 470 CCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAE 529

Query: 458 RFLKQLKWNDLV 469
           +   ++    LV
Sbjct: 530 KLRLEMIERGLV 541



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 98/222 (44%)

Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
           K   +D     +N M      P    F+ L+    ++G+  +A  +  ++ S G  P + 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
           T + LI+ YC    L+    L   +      PN+ TF  LIN  C    ++ A  F   L
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
                    F Y  +I+G CK G   +A  ++ +MEE   +P+ +T++ +I G C    +
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
            +A+ +F+ +   G   D +  NSLI      G   EA R++
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLL 253



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RML     P +  F  L+    R G     + L  ++  K ++P++ T TILIN  C + 
Sbjct: 45  RMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQA 104

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L+ A   L  +              +  GF                     +P+ VTF 
Sbjct: 105 HLSFAFSLLGTI--------------LKMGF---------------------QPNMVTFN 129

Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            LI G C+ G + +A++    ++  G   D+ +  SLI+ L K G   +A +++Q+  ED
Sbjct: 130 TLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEED 189


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 193/413 (46%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+ + C  G       + + M  +G  P+       + +  + G  + A+    + 
Sbjct: 325 SYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEI 384

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +T +YN +++  VK  +  +A  +F+E       PD  TFN L+ G  R G+ 
Sbjct: 385 EDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKE 444

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +       D+   G   D    +  ++GLC         +LL+ +  K    P VV + S
Sbjct: 445 EDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKG-IPPSVVAFNS 503

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+ Y   G  ++A   Y  M   G+ PS+ T + L+    + G++  A      M+  G
Sbjct: 504 IIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKG 563

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +    + F+ L+DGY R G +N    L +EMKG+ + P+   F   IN LC    + DA 
Sbjct: 564 FPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAY 623

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +     VP  F+YN +I GFCK G ++EA  +V EM ++   PD  T  ++I G 
Sbjct: 624 DVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGL 683

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C +GRM  AI  F  M R+G +PD +T N+LI    K      A  +M + S+
Sbjct: 684 CKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSD 736



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 196/404 (48%), Gaps = 1/404 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           ++ L+ +   YN+++    +        ++F+ MR+   +P+       V+   R GK +
Sbjct: 386 DMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEE 445

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
               LL       +   + + +  +  L      DEA+ + +        P    FN +I
Sbjct: 446 DGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSII 505

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
                 G  ++AF  +  M  FG +P   T ++L+  L R   +      L ++  K  F
Sbjct: 506 AAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKG-F 564

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
               + +T ++ GY ++G ++ A  ++NEM   G+ P AV F   I+G    G M  A  
Sbjct: 565 PVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYD 624

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   ML  G++P+   ++SLI G+C+ G+LN+ LKL  EM  + L P+++T  ++I  LC
Sbjct: 625 VFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLC 684

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ R+  A      +    L P    YN +IDG+CKA +V  A+ ++ +M +   +PD  
Sbjct: 685 KQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLT 744

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           T+ I I G+C   ++  A+ I  +++ +G  P+ +T N++I+ +
Sbjct: 745 TYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAV 788



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 198/430 (46%), Gaps = 30/430 (6%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG---KCD 208
           L H     ++ +  LC  G +D    + + +   G  P+       +++   AG   +  
Sbjct: 459 LLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAF 518

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD------TW 262
            A G++ +F    +T S+   +SLL +LV++ + DEA      +  LY   D        
Sbjct: 519 YAYGIMVKF---GLTPSSSTCSSLLISLVRKGSLDEA------WIALYDMIDKGFPVTNM 569

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            F +L+ G  RIG V  A   + +M   G  PD V +   I+GLC    +   +++  ++
Sbjct: 570 AFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDM 629

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +  F P+   Y S+I G+CK+GK+++A  +  EMN  G+ P   T N++I G  K G 
Sbjct: 630 -LRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGR 688

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  A      M   G  PD+VT+++LIDGYC+   +     L  +M      P++ T+ I
Sbjct: 689 MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNI 748

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
            I+  C   ++N A   L++L    +VP    YN +I+  C    +D A ++ A++ +  
Sbjct: 749 RIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMA 807

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
             P+ VT  +L+   C +G   +AI    K+  I    D+ T            + N A+
Sbjct: 808 FVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHK----------LMNRAY 857

Query: 563 RIMQRASEDQ 572
           R ++   E +
Sbjct: 858 RALEEGGEKK 867



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/485 (21%), Positives = 190/485 (39%), Gaps = 106/485 (21%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           +   + +MR+  +  +H     +   MR  G  PN   I       IRAG C A   L  
Sbjct: 218 YSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKL-- 275

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                                            F +  R    P+ +TFN+LI    R G
Sbjct: 276 ---------------------------------FGDVVRKGPCPNNFTFNLLILEFCRKG 302

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             +      + MG F C PD+ +YN +I+  C   + +    LL  +  ++   P + T+
Sbjct: 303 WTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLN-LMIENGCKPSIATF 361

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I  +CK G ++ A   ++E+   G+  + + +N++I G+ K  ++  A  + E M +
Sbjct: 362 CTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRT 421

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
              +PD +TF++L+ G+ R G+   G +L  ++    L  +     + +  LC   R ++
Sbjct: 422 KDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDE 481

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKA------------------------------ 485
           A + L+ L    + P    +N +I  +  A                              
Sbjct: 482 AMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLI 541

Query: 486 -----GNVDEANVIVAEMEEKRCKPDKVTFTILIIGH----------------------- 517
                G++DEA + + +M +K      + FT+L+ G+                       
Sbjct: 542 SLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFP 601

Query: 518 ------------CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                       C+ G M +A  +F+ MLR G  P++   NSLI    K G  NEA +++
Sbjct: 602 DAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLV 661

Query: 566 QRASE 570
           +  ++
Sbjct: 662 REMNK 666



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 2/303 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  S  T + ++ SL   G  D   +    M   G    +      +    R G  
Sbjct: 525 VKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAV 584

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A+ L ++ +   V      + + +N L       +A  +F +  R    P+ + +N L
Sbjct: 585 NMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSL 644

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  ++G++ +A +   +M   G  PDI T N +I GLC+   +    E   ++  +  
Sbjct: 645 IGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDM-CRMG 703

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SPD+VTY ++I GYCK   +  A  +  +M+  G +P   T+N+ I G+  V  +  A 
Sbjct: 704 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 763

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E ++S G +P+ VT++++I+  C N  L+  + L  ++      PN  T  +L++  
Sbjct: 764 MILEELISVGIVPNTVTYNTMINAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQF 822

Query: 448 CKE 450
           CK+
Sbjct: 823 CKQ 825



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%)

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
           +  D     +++  + K     +A  I ++M   G+ P+    ++L     + G+  +  
Sbjct: 214 YESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVW 273

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +   ++  G  P+  TF+ LI  +CR G    G  L   M      P+VY++ I+INA 
Sbjct: 274 KLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINAN 333

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           C + + + A   L  +  N   P    +  +ID FCK GNV+ A     E+E+     + 
Sbjct: 334 CLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNT 393

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           + + I+I G+     + +A  +F +M      PD IT N+L++   + G   +  R+++ 
Sbjct: 394 IVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRD 453

Query: 568 AS 569
            S
Sbjct: 454 LS 455


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 197/384 (51%), Gaps = 15/384 (3%)

Query: 195 EFFVSSCIRAGKC----DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
           + F+S C   G+     DA + +  + +  E   S   Y ++   LV +N    A+  ++
Sbjct: 86  DIFLSICRAYGRVHKPLDAVR-VFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYR 144

Query: 251 EYFRLYSQPDTWTFNILIQGLSR-IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
               +   P   + N+LI+ L +  G +  A   F +M + GC PD  TY TLI+GLCR+
Sbjct: 145 YMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRL 204

Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
            ++    EL KE++ K+  SP VVTYTS+I G C+   +D A  +  EM S GIKP+  T
Sbjct: 205 GKIGEAKELFKEMETKA-CSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFT 263

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           ++ L+DG  K G    A  + + M+S  +LP+++T+S+L+ G C+ G+L + +++ D MK
Sbjct: 264 YSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMK 323

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF-------MYNPVIDGF 482
            + L P+   +  +I+  C   + ++A  FL ++    + P          ++N V+ G 
Sbjct: 324 LQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGL 383

Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
           C   + + A  +   M  +    D  TF  L+   C KG + +A  + ++M+  GC PD+
Sbjct: 384 CTE-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDE 442

Query: 543 ITVNSLISCLLKGGMPNEAFRIMQ 566
           +T N+++          E+  ++Q
Sbjct: 443 VTWNAVVCAFWDRRKVRESAELVQ 466



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 160/336 (47%), Gaps = 17/336 (5%)

Query: 137 KLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCE-MGLHDSVQVVFDYMRSDGHLPNSPMIE 195
           KL L+F  + R  + +  S  + N+++++LC+  G  D+   +F  M + G  P+S    
Sbjct: 137 KLALRFYRYMR-EMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYG 195

Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
             ++   R GK   AK L  +      + +   Y SL++ L +  + D A+ + +E    
Sbjct: 196 TLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASK 255

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
             +P+ +T++ L+ G  + G   +A E    M S    P+++TY+TL+ GLC+  ++   
Sbjct: 256 GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
            E+L  +K +    PD   Y  +ISG+C + K  +A    +EM   GI P+ +T+++ + 
Sbjct: 316 VEILDRMKLQG-LRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVR 374

Query: 376 GFGKVGNMVSAEY----------MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
               V   +  E+          MR R +S     D  TF SL++ +C  G L++   L 
Sbjct: 375 IHNIVVQGLCTEHPNRAFQLYLSMRTRGISI----DAKTFDSLVNYFCNKGDLHKAAHLV 430

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           DEM      P+  T+  ++ A     ++ ++   ++
Sbjct: 431 DEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQ 466



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 298 TYNTLISGLCRVNEVARGHELLKEVKF-KSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           T++ +IS L   N      ELL  +K  K   + D+  + S+   Y ++ K   A  ++ 
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDI--FLSICRAYGRVHKPLDAVRVFR 109

Query: 357 EMNSCGIKPSA----VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
           +M     +PS       F +L+        +    YMRE     G  P V + + LI   
Sbjct: 110 KMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMRE----MGIPPSVASLNVLIKAL 165

Query: 413 CRN-GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           C+N G ++  L++  EM  +   P+ YT+  LIN LC+  ++ +A+   K+++     P 
Sbjct: 166 CKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPT 225

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
              Y  +I G C++ ++D A  ++ EM  K  KP+  T++ L+ GHC  G    A+ + +
Sbjct: 226 VVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLD 285

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            M+     P+ IT ++L+  L K G   EA  I+ R
Sbjct: 286 MMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDR 321


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 178/359 (49%), Gaps = 2/359 (0%)

Query: 204 AGKCDAAKGLLSQ-FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
           AG   +A  +L++  + G+  +      +L+N   K  +  EA  +F E   L   P+  
Sbjct: 15  AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T+  L+ G    G+ +K F  F +M   G  P++ TYN LI   CR  E  R   L  E+
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +     +VV+Y ++I+G C+ GK+  A  + + M + G +PS +TFN+L+DG+GK G 
Sbjct: 135 PVRG-IVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGK 193

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M +A     +M + G+ P  VT++ LI G+CR   + +  +   +MK + L P   T+TI
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           LI++  +EN +  A   L  ++   L      Y  ++   C  GN+ +A  +   M EK 
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
            +P  V + ++I G+  +G   +A+ +  +M + G  P+  +    I  L K     EA
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEA 372



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 196/400 (49%), Gaps = 12/400 (3%)

Query: 156 FKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + T    +R LC  G +  ++ ++    +S     +       V+ C + G    A+ + 
Sbjct: 2   WGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVF 61

Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
            +       P EVT     Y +L++        ++   +F+E  R   +P+ +T+N LI 
Sbjct: 62  DEMPLLGLAPNEVT-----YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIG 116

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
              R GE ++A   F +M   G   ++V+YNTLI+GLCR  ++    +LL  ++ +    
Sbjct: 117 EWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGT-R 175

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P ++T+  ++ GY K GKM  A   +N+M + G +PSAVT+N+LI GF +  +M  A   
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
              M   G  P  VT++ LID + R   + +  ++   M+   L  + +T+ +L+ ALC 
Sbjct: 236 LSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCM 295

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
           E  + DAR+  + +    + P   +Y+ +I G+ + G+  +A  ++ EM +K   P+  +
Sbjct: 296 EGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSAS 355

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           + + I   C   +  EA ++ + M+R G    +    +L+
Sbjct: 356 YGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALL 395



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 156/306 (50%), Gaps = 1/306 (0%)

Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
           D      L+ G  + G+V +A   F +M   G +P+ VTY  L+ G     +  +G  L 
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
           +E++ +    P++ TY  +I  +C+ G+ ++A  +++EM   GI  + V++N LI G  +
Sbjct: 97  EEMR-RGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCR 155

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G +  A  + + M + G  P ++TF+ L+DGY + G+++  L   ++MK     P+  T
Sbjct: 156 HGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVT 215

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           + +LI   C+   +  A R L  +K   L P    Y  +ID F +  ++ +A  I+A ME
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           +   + D  T+ +L+   CM+G M +A  +F  M   G  P ++  + +I    + G   
Sbjct: 276 KAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSY 335

Query: 560 EAFRIM 565
           +A +++
Sbjct: 336 KALKLI 341



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 3/311 (0%)

Query: 262 W-TFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTLISGLCRVNEVARGHELL 319
           W T    ++ L   G+V+ A          G  + D+     L++G C+  +VA    + 
Sbjct: 2   WGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVF 61

Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
            E+      +P+ VTYT+++ GY   G+ +K   ++ EM   G++P+  T+N LI  + +
Sbjct: 62  DEMPLLG-LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
            G    A  + + M   G + +VV++++LI G CR+G+L    KL D M+ +   P++ T
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
           F +L++   K  ++++A  F  Q+K     P    YN +I GFC+A ++  AN  +++M+
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
           E+  +P KVT+TILI     +  M +A  I   M + G   D  T   L+  L   G   
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMK 300

Query: 560 EAFRIMQRASE 570
           +A ++ Q   E
Sbjct: 301 DARKLFQSMGE 311



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 40/323 (12%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           F E  R  +  N    TYN ++   C  G  +  + +FD M   G + N       ++  
Sbjct: 96  FEEMRRGGVEPN--LYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGL 153

Query: 202 IRAGKC-DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
            R GK  DAAK LL   R      S   +N L++   K      A+  F +      QP 
Sbjct: 154 CRHGKLWDAAK-LLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPS 212

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T+N+LI G  R  ++ +A     DM   G  P  VTY  LI    R N + +  E+L 
Sbjct: 213 AVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILA 272

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            ++ K+    D  TY  ++   C  G M  A  ++  M   G++PS V ++++I G+G  
Sbjct: 273 GME-KAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG-- 329

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
                                            R G   + LKL  EM+ K L PN  ++
Sbjct: 330 ---------------------------------REGSSYKALKLIMEMRQKGLIPNSASY 356

Query: 441 TILINALCKENRLNDARRFLKQL 463
            + I  LCK+++  +A   L  +
Sbjct: 357 GLTIRVLCKDDKCQEAEALLDDM 379



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 1/221 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  T+NL++    + G   +    F+ M++ G  P++      ++   RA     A   L
Sbjct: 177 SIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRAL 236

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S  +   +  +   Y  L+++  ++N+  +A  +     +   + D  T+ +L++ L   
Sbjct: 237 SDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCME 296

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G +K A + F  MG  G  P  V Y+ +I G  R     +  +L+ E++ K    P+  +
Sbjct: 297 GNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKG-LIPNSAS 355

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
           Y   I   CK  K  +A  + ++M   G++ S      L+D
Sbjct: 356 YGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLD 396


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 190/394 (48%), Gaps = 1/394 (0%)

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
           N +  T+N V+ + C+ G     + +FD ++  G  PN+ M    ++  ++  + D A  
Sbjct: 333 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 392

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L  + R   +      +N L++   K    ++   + K+   L   PD   F+I + GL 
Sbjct: 393 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 452

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
             G + +A EF  DM   G SP I+ +N++I+   +     +  E  K +      +P  
Sbjct: 453 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK-LMVHFGLTPSP 511

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
            T +S++ G    G++ +AT +  +M   G+  + + F VL+D F K G++V A+ +   
Sbjct: 512 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 571

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G  PDVV FS+ IDG  + G + +   +  EM  K L PN + +  LI   CK  +
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           LN+A +  K ++   L+P  F  N +I G CK G +  A  +  +M +    PD +T+  
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
           LI G+C    MV A ++ N+M   G  PD  T N
Sbjct: 692 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN 725



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 196/463 (42%), Gaps = 71/463 (15%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
            YN+V+ + C  G        F+ M   G  P        +++  + G    A+ L    
Sbjct: 303 AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL 362

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +    + +  MYN+L+N  VK    D+A  +++E  +    PD  TFNIL+ G  + G  
Sbjct: 363 KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGRE 422

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +       D+   G  PD   ++  +SGLC    +    E L ++  +   SP ++ + S
Sbjct: 423 EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM-LEKGLSPSIIAFNS 481

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVT---------------------------- 369
           VI+ Y + G  DKA   Y  M   G+ PS  T                            
Sbjct: 482 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 541

Query: 370 -------FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG----------- 411
                  F VL+D F K G++V A+ +   M   G  PDVV FS+ IDG           
Sbjct: 542 LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAY 601

Query: 412 ------------------------YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                                   +C+ G+LN+ LKL   M+ + L P+++T  ++I  L
Sbjct: 602 NVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL 661

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
           CK+ R+  A      +    L P    YN +I+G+CKA ++  A+ +V  M      PD 
Sbjct: 662 CKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDL 721

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
            T+ I I G C   RM  A+ + ++++  G  P+ +T NS+++
Sbjct: 722 TTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLN 764



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 179/397 (45%), Gaps = 36/397 (9%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           PN+      +++C   G+   A    +         +   +N+++NA  K+ N  EA  +
Sbjct: 299 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 358

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           F     +   P+   +N L+ G  ++ E+ +A   + +M   G +PD +T+N L+SG  +
Sbjct: 359 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 418

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
                 G  LLK++       PD   +   +SG C  G++D+A     +M   G+ PS +
Sbjct: 419 YGREEDGDRLLKDISVLG-LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSII 477

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            FN +I  + + G    A    + M+ FG  P   T SSL+ G   NG+L +  +L  +M
Sbjct: 478 AFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQM 537

Query: 429 KGKNLS-----------------------------------PNVYTFTILINALCKENRL 453
             K LS                                   P+V  F+  I+ L K+  +
Sbjct: 538 IEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLV 597

Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            +A     ++    L+P  F YN +I GFCK G ++EA  +   M  +   PD  T  ++
Sbjct: 598 EEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMI 657

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           I G C +GRM  AI++F  M + G +PD IT N+LI+
Sbjct: 658 IGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLIN 694



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 159/311 (51%), Gaps = 1/311 (0%)

Query: 254 RLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVA 313
           + + +P+ + +NI+I      G    A  +F  M   GC+P +VT+NT+I+  C+   V 
Sbjct: 294 KFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVV 353

Query: 314 RGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVL 373
              +L   +K +  FSP+ + Y ++++GY K+ ++D+A  +Y EM   GI P  +TFN+L
Sbjct: 354 EARKLFDGLK-EMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNIL 412

Query: 374 IDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNL 433
           + G  K G     + + + +   G LPD   F   + G C  G+L++ ++   +M  K L
Sbjct: 413 VSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGL 472

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           SP++  F  +I A  +    + A    K +    L P P   + ++ G    G + EA  
Sbjct: 473 SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATE 532

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++ +M EK    + + FT+L+     +G +V A S++ +M R G  PD +  ++ I  L 
Sbjct: 533 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 592

Query: 554 KGGMPNEAFRI 564
           K G+  EA+ +
Sbjct: 593 KQGLVEEAYNV 603



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 2/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++    + G  +    +   +   G LP+  + +  VS    AG+ D A   L   
Sbjct: 408 TFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDM 467

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ S   +NS++ A  +    D+A   +K        P   T + L+ GLS  G +
Sbjct: 468 LEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRL 527

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           ++A E    M   G S + + +  L+    +  +V     L  E++ +  F PDVV +++
Sbjct: 528 QEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF-PDVVAFSA 586

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
            I G  K G +++A  ++ EM   G+ P+   +N LI GF K G +  A  + + M   G
Sbjct: 587 FIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRG 646

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
            LPD+ T + +I G C+ G++   + +  +M    LSP++ T+  LIN  CK   + +A 
Sbjct: 647 LLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNAD 706

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
             + ++  +   P    YN  I GFC +  ++ A +++ E+      P+ VT+  ++ G 
Sbjct: 707 NLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGV 766

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C    +  A+ +  ++L++   P+ +T N L+S   K GMP        + SE
Sbjct: 767 C-SDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSE 818



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 4/356 (1%)

Query: 217 FRPGEVTMSTF-MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
           +R   V  S F + +SL+ A V      +A+ +      +  +P      IL + L R+G
Sbjct: 186 WRGHHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVG 245

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEFSPDVVT 334
           +    ++ F D+   G  P   T++ +I G CR   +  G  LL  + KF  E  P+   
Sbjct: 246 DYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCE--PNAFA 303

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  VI+  C  G+   A   +N M   G  P+ VTFN +I+ F K GN+V A  + + + 
Sbjct: 304 YNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK 363

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G+ P+ + +++L++GY +  +++Q   L +EM+ K ++P+  TF IL++   K  R  
Sbjct: 364 EMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREE 423

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           D  R LK +    L+P   +++  + G C AG +DEA   + +M EK   P  + F  +I
Sbjct: 424 DGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVI 483

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
             +   G   +A   +  M+  G  P   T +SL+  L   G   EA  ++ +  E
Sbjct: 484 AAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE 539



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 223/487 (45%), Gaps = 9/487 (1%)

Query: 83  KEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCAR--YLCEK-LSPLNSLEVIKRLDNPKLG 139
           +E+ +   +  W+V +    +LRS  L +   R  ++ E   S L+SL  ++   N ++G
Sbjct: 156 EELRHVAQDVIWWV-IARIGVLRSGDLVEFMWRGHHVYESDFSVLDSL--MRAFVNAEMG 212

Query: 140 LKFLE-FSRV-NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
            + LE   R+  + +  S     ++ + L  +G + +V  +F  +   G  P        
Sbjct: 213 FQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGI 272

Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
           +    R G     + LL          + F YN ++NA   +    +A+  F        
Sbjct: 273 ILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGC 332

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
            P   TFN +I    + G V +A + F  +   G SP+ + YNTL++G  ++ E+ + + 
Sbjct: 333 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 392

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L +E++ K   +PD +T+  ++SG+ K G+ +    +  +++  G+ P    F++ + G 
Sbjct: 393 LYEEMR-KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 451

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
              G +  A      ML  G  P ++ F+S+I  Y + G  ++  +    M    L+P+ 
Sbjct: 452 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 511

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
            T + L+  L    RL +A   + Q+    L      +  ++D F K G+V  A  +  E
Sbjct: 512 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 571

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           ME +   PD V F+  I G   +G + EA ++F +MLR G  P++   NSLI    K G 
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 558 PNEAFRI 564
            NEA ++
Sbjct: 632 LNEALKL 638



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 176/366 (48%), Gaps = 2/366 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           L+ S   +N V+ +  + GL D     +  M   G  P+       +      G+   A 
Sbjct: 472 LSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEAT 531

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L+ Q     ++++   +  LL+   K+ +   A  ++ E  R    PD   F+  I GL
Sbjct: 532 ELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGL 591

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
           S+ G V++A+  F +M   G  P+   YN+LI G C+  ++    +L K ++ +    PD
Sbjct: 592 SKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRG-LLPD 650

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           + T   +I G CK G+M  A  ++ +M+  G+ P  +T+N LI+G+ K  +MV+A+ +  
Sbjct: 651 IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVN 710

Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
           RM + G  PD+ T++  I G+C + ++N+ + + DE+    + PN  T+  ++N +C + 
Sbjct: 711 RMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD- 769

Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
            L+ A     +L     VP     N ++  F K G  +   +   ++ E     D++T+ 
Sbjct: 770 ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYK 829

Query: 512 ILIIGH 517
           I+   H
Sbjct: 830 IMDKAH 835


>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
 gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
          Length = 600

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 193/401 (48%), Gaps = 2/401 (0%)

Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
           HD+++V FD MR+ G  P++      +++  RA     A+ +  +     + +ST +YN+
Sbjct: 131 HDALRV-FDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNA 189

Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
           +L+  +K  +A  A  +           D +++N +I    + G   +A      M   G
Sbjct: 190 MLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEG 249

Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
              D VT+N+LI GLC+   V    +L  E+   ++ +PD VTYT++I GYC+ G +++A
Sbjct: 250 IRADTVTWNSLIHGLCKYGRVKEAAQLFTEMA-AAQATPDNVTYTTLIDGYCRAGNIEEA 308

Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
             +  EM + G+ P   T+N ++    + G M     +   M       D VT ++LI+ 
Sbjct: 309 VKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINA 368

Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
           YC+ G +    K+  +M    L  N +T+  LI+  CK   L++A+    Q+      P 
Sbjct: 369 YCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPN 428

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
             +++ ++DGFCK  N D   +I  E+ ++   PDK  +  LI   C KG + +A  +F+
Sbjct: 429 YSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFD 488

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
           +M   G   D +   +L    L  G P  A   +   +++Q
Sbjct: 489 QMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQ 529



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 186/374 (49%), Gaps = 1/374 (0%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++ +L    +  + + VFD M   G   ++ +    +  C++AG    A+ L+++     
Sbjct: 155 LLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAG 214

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V +  F YN+++    K+    EA+ +     +   + DT T+N LI GL + G VK+A 
Sbjct: 215 VPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAA 274

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
           + F +M +   +PD VTY TLI G CR   +    +L  E++  +   P V TY +++  
Sbjct: 275 QLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEME-ATGMLPGVATYNAILRK 333

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
            C+ GKM +   + NEM+   ++   VT N LI+ + K G+M SA  ++++M+  G   +
Sbjct: 334 LCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLN 393

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
             T+ +LI G+C+  +L++  +   +M     SPN   F+ L++  CK+N  +       
Sbjct: 394 QFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPD 453

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           +L    L P   +Y  +I   C+ G VD+A  +  +M+ K    D + +  L   +  +G
Sbjct: 454 ELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEG 513

Query: 522 RMVEAISIFNKMLR 535
           + V A +  + M +
Sbjct: 514 KPVAASNTLDGMAK 527



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 143/323 (44%), Gaps = 9/323 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN V+   C+ G+      V D M  +G   ++      +    + G+   A  L ++ 
Sbjct: 221 SYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEM 280

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
              + T     Y +L++   +  N +EAV +  E       P   T+N +++ L   G++
Sbjct: 281 AAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKM 340

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL----LKEVKFKSEFSPDVV 333
           K+  +   +M       D VT NTLI+  C+     RGH      +K+   +S    +  
Sbjct: 341 KEVNQLLNEMDERKVQADHVTCNTLINAYCK-----RGHMTSACKVKKKMMESGLQLNQF 395

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
           TY ++I G+CK  ++D+A   + +M   G  P+   F+ L+DGF K  N  +   + + +
Sbjct: 396 TYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDEL 455

Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
           +  G  PD   + SLI   CR G ++Q  K+ D+M+ K L  +   +  L      E + 
Sbjct: 456 MKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKP 515

Query: 454 NDARRFLKQLKWNDLVPKPFMYN 476
             A   L  +  N L   P +YN
Sbjct: 516 VAASNTLDGMAKNQLYITPQIYN 538



 Score = 38.9 bits (89), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 8/119 (6%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y  ++R LC  GL D  Q VFD M+S G + +S +      + +  GK  AA   L    
Sbjct: 467 YRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMA 526

Query: 219 PGEVTMSTFMYNSLLNALVKQNN--------ADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
             ++ ++  +YN L  +   +          A E   + K  ++L  Q    + N+ ++
Sbjct: 527 KNQLYITPQIYNCLCTSYADEKETLNILWVRAIERGLIKKSVYKLMHQARLESTNLAVE 585


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 160/302 (52%), Gaps = 1/302 (0%)

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
           +KE          + FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R
Sbjct: 130 YKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
           + ++  G  L K     S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ V
Sbjct: 190 LGDLDEGFRL-KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
            F  LIDG  K G +  A  + ++MLS   LPD++T+++LI G C+ G L Q   L DEM
Sbjct: 249 IFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEM 308

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             K L P+  T+T LI+  CKE  L+ A    KQ+   ++      Y  +I G C+ G  
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRS 368

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
            +A  ++ EM     KPD  T+T++I   C KG + +   +  +M R G  P  +T N L
Sbjct: 369 VDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428

Query: 549 IS 550
           ++
Sbjct: 429 MN 430



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 160/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ V +T++I G+CK
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LVPNGVIFTTLIDGHCK 259

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++    ++ + M   G  PD +T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKIT 319

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +   +M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 380 NVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 212/434 (48%), Gaps = 28/434 (6%)

Query: 146 SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG 205
           S  N +  H+  +Y  ++  LC      + Q++++            +I+  VS   R G
Sbjct: 9   SPANSTFRHTLHSYCTMIHFLC------THQMLWE---------AKSLIQVVVS---RKG 50

Query: 206 KCDAAKGLLSQFRP-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW-- 262
           K  A+    +     G      ++++ L+ A ++     +A+    E +RL  +   W  
Sbjct: 51  KGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAI----ECYRLTREHKFWVP 106

Query: 263 --TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
             T   +++ L ++   K  + F+ ++   G    +  +N L+   C+  ++     +  
Sbjct: 107 FDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFD 166

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +  K    P VV+Y ++++GY +LG +D+   + + M + G++P   T++VLI+G  K 
Sbjct: 167 AIT-KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKE 225

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
             M  A  + + ML  G +P+ V F++LIDG+C+NG+++  +++  +M  ++L P++ T+
Sbjct: 226 SKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITY 285

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
             LI  LCK+  L      + ++    L P    Y  +IDG CK G++D A     +M +
Sbjct: 286 NTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQ 345

Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
           +  + D+V +T LI G C +GR V+A  +  +ML +G  PD  T   +I+   K G   +
Sbjct: 346 ENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWK 405

Query: 561 AFRIMQRASEDQNL 574
             ++++    D ++
Sbjct: 406 GSKLLKEMQRDGHV 419



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 143/292 (48%), Gaps = 1/292 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    L 
Sbjct: 141 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           S      V    + Y+ L+N L K++  D+A  +F E       P+   F  LI G  + 
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKN 260

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           G V  A E +  M S    PD++TYNTLI GLC+  ++ + H L+ E+  K    PD +T
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKG-LKPDKIT 319

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YT++I G CK G +D A     +M    I+   V +  LI G  + G  V AE M   ML
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           + G  PD  T++ +I+ +C+ G + +G KL  EM+     P+V T+ +L+N 
Sbjct: 380 NVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|145517919|ref|XP_001444837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412270|emb|CAK77440.1| unnamed protein product [Paramecium tetraurelia]
          Length = 981

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 199/383 (51%), Gaps = 11/383 (2%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE-VTMSTFMYNSLLNALVKQNNADEAVY 247
           P+  +    + +CI AG  +    LL++ +  + + +    YN+L+    ++   ++A+ 
Sbjct: 390 PDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQTIQLDEITYNTLIKGCGRKKRLNDALN 449

Query: 248 MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGL 306
           +F+E   +  +P+  +FN L+    +  ++  A+ +F +M   +G  PD  TY+ L++G+
Sbjct: 450 LFEEMKLIGIKPNRISFNSLLDSCVKCNKMNIAWRYFEEMRKQYGIFPDNFTYSILVNGI 509

Query: 307 ----CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
                  +E+ R   LL++++   +F PD + Y S+I    K  ++ K   ++ EM +  
Sbjct: 510 KTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQ 569

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
           I+PS+VT+ +LI  +GK  ++  A  + E M       + VT+  L+D   RN +L+Q L
Sbjct: 570 IEPSSVTYGILIKAYGKQNDLNGAFKIFEEMKQKKIPINDVTYGCLVDACVRNDRLDQAL 629

Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN-DLVPKPFMYNPVIDG 481
           +  D+MK +NL  N   +T +I   CK N+  +A ++   +K +    P    YN ++DG
Sbjct: 630 QFIDQMKSQNLPINTVLYTTIIKGFCKLNQTEEAIKYFDLMKQSPKTYPNLITYNSLLDG 689

Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
             K G +++A+ +  E+ + + KPD +TF+ L+ GHC KG M         M  +  +PD
Sbjct: 690 MVKNGLLNQADKLFQELVDSKIKPDLITFSTLLKGHCRKGNMKRLNETVQIMTGLQISPD 749

Query: 542 DITVNSLISCLLKGGMPNEAFRI 564
           +    SL+  +L+  +  + + I
Sbjct: 750 E----SLLQLILEACLNQQQYHI 768



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 211/460 (45%), Gaps = 50/460 (10%)

Query: 157 KTYNLVMRSLCEMGLHDSVQV-VFDYMRSDGHLPNSPMIEFF---VSSCIRAGKCDAAKG 212
           K  ++++R L E+   ++    +F+ +  +G +   P   FF   +    R  + + A+ 
Sbjct: 247 KICDMLLRQLIELSSSNNQWYPIFNQVLYEGVINLHPTDIFFNKLIDYAFRKSQVEMAEY 306

Query: 213 LLSQFR-PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
           LL   R   ++  +    N++++   K N  ++A   F+      ++PD +T+  LI GL
Sbjct: 307 LLVFMRDQAKIQPTIVTINTMIDQYFKNNQREKAWKTFENLKLTQTKPDNFTYTTLINGL 366

Query: 272 --SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
             S   ++K AF  F +   +   PD + YN L+       ++ RG +LL E+K      
Sbjct: 367 KNSDNMDLKLAFSLFEEYKQYN-QPDQIIYNCLLDACINAGDLNRGFQLLNEMKQSQTIQ 425

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-VSAEY 388
            D +TY ++I G  +  +++ A  ++ EM   GIKP+ ++FN L+D   K   M ++  Y
Sbjct: 426 LDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGIKPNRISFNSLLDSCVKCNKMNIAWRY 485

Query: 389 MRERMLSFG----------------------------------------YLPDVVTFSSL 408
             E    +G                                        + PD + ++SL
Sbjct: 486 FEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSL 545

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID   +  ++ +G++L  EMK K + P+  T+ ILI A  K+N LN A +  +++K   +
Sbjct: 546 IDACVKFNEIQKGMELFREMKNKQIEPSSVTYGILIKAYGKQNDLNGAFKIFEEMKQKKI 605

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
                 Y  ++D   +   +D+A   + +M+ +    + V +T +I G C   +  EAI 
Sbjct: 606 PINDVTYGCLVDACVRNDRLDQALQFIDQMKSQNLPINTVLYTTIIKGFCKLNQTEEAIK 665

Query: 529 IFNKMLRI-GCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            F+ M +     P+ IT NSL+  ++K G+ N+A ++ Q 
Sbjct: 666 YFDLMKQSPKTYPNLITYNSLLDGMVKNGLLNQADKLFQE 705



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 188/408 (46%), Gaps = 21/408 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYN +++        +    +F+ M+  G  PN       + SC++  K + A     + 
Sbjct: 430 TYNTLIKGCGRKKRLNDALNLFEEMKLIGIKPNRISFNSLLDSCVKCNKMNIAWRYFEEM 489

Query: 218 RPGE-VTMSTFMYNSLLNAL-VKQNNADE---AVYMFKEYFRLYS-QPDTWTFNILIQGL 271
           R    +    F Y+ L+N +    +N DE   A+ + ++       +PD   +N LI   
Sbjct: 490 RKQYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDAC 549

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            +  E++K  E F +M +    P  VTY  LI    + N++    ++ +E+K K +   +
Sbjct: 550 VKFNEIQKGMELFREMKNKQIEPSSVTYGILIKAYGKQNDLNGAFKIFEEMKQK-KIPIN 608

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA-EYMR 390
            VTY  ++    +  ++D+A    ++M S  +  + V +  +I GF K+     A +Y  
Sbjct: 609 DVTYGCLVDACVRNDRLDQALQFIDQMKSQNLPINTVLYTTIIKGFCKLNQTEEAIKYFD 668

Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
               S    P+++T++SL+DG  +NG LNQ  KL  E+    + P++ TF+ L+   C++
Sbjct: 669 LMKQSPKTYPNLITYNSLLDGMVKNGLLNQADKLFQELVDSKIKPDLITFSTLLKGHCRK 728

Query: 451 ---NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
               RLN+  + +  L+   + P   +   +++             I  +   +  +  +
Sbjct: 729 GNMKRLNETVQIMTGLQ---ISPDESLLQLILEACLNQQQYHIGVQIFDQFCHQIPQSTQ 785

Query: 508 VTFTILIIGHCMKGRMVEAISIFNKML------RIGCAPDDITVNSLI 549
           +  TI+ + HC+  ++V+A+S+ N++       R+     + T+NSL+
Sbjct: 786 LLLTIIRL-HCLDKKLVQAMSLLNRLYQLMDENRVQHQFLEQTINSLL 832



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 173/361 (47%), Gaps = 15/361 (4%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYS--QPDTWTFNILIQGLSRIGEVKKAFE 282
           +   +N L++   +++  + A Y+   + R  +  QP   T N +I    +  + +KA++
Sbjct: 284 TDIFFNKLIDYAFRKSQVEMAEYLLV-FMRDQAKIQPTIVTINTMIDQYFKNNQREKAWK 342

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVN--EVARGHELLKEVKFKSEFSPDVVTYTSVIS 340
            F ++      PD  TY TLI+GL   +  ++     L +E  +K    PD + Y  ++ 
Sbjct: 343 TFENLKLTQTKPDNFTYTTLINGLKNSDNMDLKLAFSLFEE--YKQYNQPDQIIYNCLLD 400

Query: 341 GYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
                G +++   + NEM  S  I+   +T+N LI G G+   +  A  + E M   G  
Sbjct: 401 ACINAGDLNRGFQLLNEMKQSQTIQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGIK 460

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINAL----CKENRLN 454
           P+ ++F+SL+D   +  ++N   +  +EM+ +  + P+ +T++IL+N +       + L 
Sbjct: 461 PNRISFNSLLDSCVKCNKMNIAWRYFEEMRKQYGIFPDNFTYSILVNGIKTNHSNRDELL 520

Query: 455 DARRFLKQLKWN-DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
            A   L+Q++      P   +YN +ID   K   + +   +  EM+ K+ +P  VT+ IL
Sbjct: 521 RAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQIEPSSVTYGIL 580

Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQN 573
           I  +  +  +  A  IF +M +     +D+T   L+   ++    ++A + + +  + QN
Sbjct: 581 IKAYGKQNDLNGAFKIFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIDQM-KSQN 639

Query: 574 L 574
           L
Sbjct: 640 L 640


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 156/280 (55%), Gaps = 1/280 (0%)

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           M   GC P +VT+  L+ GLC+ N +    EL++ +  +  F P+ + +  ++   CK G
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCF-PNALVFNGIMDALCKEG 59

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
           +  +A G    M S G+ P+ VT+N+LIDGF K   +  A  + + M   G+ P+ VT++
Sbjct: 60  RSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYN 119

Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
           + + G C+ G+++  L L   M  K +  +VY +T LI+ LC+  +L +A   L +++ +
Sbjct: 120 TFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS 179

Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
             VPKP  YN ++   CK   ++EA+ +   M      PD +TF +++ G+C   R+ +A
Sbjct: 180 GCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDA 239

Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           + +  +M   G AP ++  N+LI  L + G  +EA+R++Q
Sbjct: 240 LLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQ 279



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 148/289 (51%), Gaps = 1/289 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           +   +  L++ L K N   +A  + +        P+   FN ++  L + G   +A+ + 
Sbjct: 9   TVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYI 68

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M S G SP IVTYN LI G C+  ++ R  E+L+E+  +    P+ VTY + + G CK
Sbjct: 69  ETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGH-EPNHVTYNTFLHGLCK 127

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            GK+D A  ++  M    I+     +  LIDG  + G +  A  + + M + G +P    
Sbjct: 128 YGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGC 187

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++++   C+  ++N+  KL   M G  + P+  TF +++   C+ +R++DA   L+Q+K
Sbjct: 188 YNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMK 247

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
              L P+  +YN +ID   +AG V EA  ++ EM  +   P+  T+ ++
Sbjct: 248 SAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 146/286 (51%), Gaps = 1/286 (0%)

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           P   TF IL+ GL +   +  AFE    M   GC P+ + +N ++  LC+    A  +  
Sbjct: 8   PTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGY 67

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           ++ ++     SP +VTY  +I G+CK  K+ +A  I  EM   G +P+ VT+N  + G  
Sbjct: 68  IETMRSMG-VSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLC 126

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G +  A  +   M       DV  +++LIDG C+ G+L +   L DEM+     P   
Sbjct: 127 KYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPG 186

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            +  +++ LCK +R+N+A +  K++  + ++P    +  ++ G+C+   +D+A +++ +M
Sbjct: 187 CYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQM 246

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT 544
           +     P +V +  LI      GR+ EA  +  +M+  G +P+  T
Sbjct: 247 KSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRT 292



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 154/324 (47%), Gaps = 8/324 (2%)

Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
           M   G +P        V    +A +   A  L+          +  ++N +++AL K+  
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 242 ADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
           + EA Y + E  R +   P   T+NILI G  +  ++ +A E   +M   G  P+ VTYN
Sbjct: 61  SAEA-YGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYN 119

Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
           T + GLC+  +V     L + +  K +   DV  YT++I G C+ GK+ +A  + +EM +
Sbjct: 120 TFLHGLCKYGKVDDALALFRAMTEK-KIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMEN 178

Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
            G  P    +N ++    K   +  A  + +RM   G LPD +TF  ++ GYCR  +++ 
Sbjct: 179 SGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDD 238

Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
            L L  +MK   L+P    +  LI+AL +  R+++A R L+++    L P    Y     
Sbjct: 239 ALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY----- 293

Query: 481 GFCKAGNVDEANVIVAEMEEKRCK 504
              +    D++N++V     K C+
Sbjct: 294 ALMRKQQTDDSNLVVELDYRKECE 317



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 2/222 (0%)

Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
           M   G  P+ VTF +L+DG  K   +  A  + E M   G  P+ + F+ ++D  C+ G+
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
             +     + M+   +SP + T+ ILI+  CKE +L+ A   L+++      P    YN 
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
            + G CK G VD+A  +   M EK+ + D   +T LI G C  G++ EA S+ ++M   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 538 CAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
           C P     N+++S L KG   NEA ++ +R +      LP W
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSG--ILPDW 220



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 144/287 (50%), Gaps = 3/287 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T+ +++  LC+   L D+ ++V + M   G  PN+ +    + +  + G+   A G +  
Sbjct: 12  TFGILVDGLCKANRLTDAFELV-EVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIET 70

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            R   V+ +   YN L++   K+     A+ + +E      +P+  T+N  + GL + G+
Sbjct: 71  MRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A   F  M       D+  Y TLI GLC+  ++A  + LL E++  S   P    Y 
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME-NSGCVPKPGCYN 189

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++S  CK  ++++A  ++  M   GI P  +TF +++ G+ +   +  A  + ++M S 
Sbjct: 190 AILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSA 249

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           G  P  V +++LID   R G++++  +L  EM  + LSPN  T+ ++
Sbjct: 250 GLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 39/266 (14%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS 200
           ++E  R ++ ++ +  TYN+++   C E  LH +++++ + M   GH PN      F+  
Sbjct: 67  YIETMR-SMGVSPTIVTYNILIDGFCKEEKLHRALEILQE-MTGRGHEPNHVTYNTFLHG 124

Query: 201 CIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
             + GK D A  L       ++ +  + Y +L                            
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTL---------------------------- 156

Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
                  I GL + G++ +A+    +M + GC P    YN ++S LC+ + +   H+L K
Sbjct: 157 -------IDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFK 209

Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
            +   S   PD +T+  ++ GYC+  ++D A  +  +M S G+ P  V +N LID   + 
Sbjct: 210 RMT-GSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRA 268

Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFS 406
           G +  A  + + M+S G  P+  T++
Sbjct: 269 GRVSEAYRLLQEMISRGLSPNSRTYA 294


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 162/300 (54%), Gaps = 5/300 (1%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           N+LL+ L +   +++ V +F+  F    +P+  ++  L++ L R G++ KA     +M  
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
               PD+ TYN +I  LC+   ++R  E      F++   PDVVTY +++ G CK G++ 
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEF-----FETMPEPDVVTYNTLLGGLCKNGRVA 118

Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
           +A  ++  M   GI PS VT+  LID F K+    +A  + + M S    P V ++ S+I
Sbjct: 119 QACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSII 178

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
           +G C+N +++Q  +L +EMK     P+  T+  LI+ LC + RL++A+  L  +  N   
Sbjct: 179 NGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQ 238

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
           P    +  +I+G C    + EA V+   M ++ C PD VT T+L+   C+  ++  A+S+
Sbjct: 239 PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV 298



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 190/406 (46%), Gaps = 12/406 (2%)

Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           + + VVF  + S    PN+    + V +  R GK D A   +++    ++    F YN +
Sbjct: 17  EQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVV 76

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
           ++ L K      A+    E+F    +PD  T+N L+ GL + G V +A   F  M   G 
Sbjct: 77  IDTLCKARRISRAI----EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGI 132

Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
           +P  VTY TLI   C++ +    + LL ++    + SP V +Y S+I+G CK  K+D+A 
Sbjct: 133 TPSDVTYTTLIDVFCKMCQFETAYGLL-QLMASRKCSPTVYSYCSIINGLCKNRKVDQAY 191

Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
            ++ EM   G KP  VT+N LI G      +  A+ +   M+  G+ PD +TF++LI+G 
Sbjct: 192 QLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGL 251

Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
           C   ++ +   L   M  +  +P++ T T+L++ LC   +L  A   L  ++     P+ 
Sbjct: 252 CTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPA---LSVVRNYPACPEA 308

Query: 473 -FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
             +Y P+     +    D A  ++ +M  +   P+ VT+T    G       + A   F 
Sbjct: 309 VILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFR 368

Query: 532 KMLRIGCAPDDITVNSLISCLLKG---GMPNEAFRIMQRASEDQNL 574
           +ML  G  PD +  N L+    K     M  +  R M ++    N+
Sbjct: 369 RMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNI 414



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 147/298 (49%), Gaps = 7/298 (2%)

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
           T N L+  L R    ++    F  + S  C P+ ++Y  L+  LCR  ++ +    + E+
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             + +  PDV TY  VI   CK  ++ +A   +  M     +P  VT+N L+ G  K G 
Sbjct: 62  A-REKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR 116

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           +  A  +   M   G  P  VT+++LID +C+  Q      L   M  +  SP VY++  
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
           +IN LCK  +++ A +  +++K     P    YN +I G C    + EA  ++  M E  
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS--CLLKGGMP 558
            +PDK+TFT LI G C   R+ EA  +F  M + GCAPD +T   L+S  C+L+   P
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRP 294



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 135/270 (50%), Gaps = 5/270 (1%)

Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYN 356
           VT N L+  L R     +   + + + F  +  P+ ++Y  ++   C+ GK+DKA     
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRI-FSQDCKPNALSYCYLVKALCRTGKIDKACSTIA 59

Query: 357 EMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
           EM    + P   T+NV+ID   K   +  A    E M      PDVVT+++L+ G C+NG
Sbjct: 60  EMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNG 115

Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
           ++ Q   L   M+G  ++P+  T+T LI+  CK  +   A   L+ +      P  + Y 
Sbjct: 116 RVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYC 175

Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
            +I+G CK   VD+A  +  EM+   CKPD+VT+  LI G C+K R+ EA  +   M+  
Sbjct: 176 SIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVEN 235

Query: 537 GCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           G  PD IT  +LI  L       EAF + Q
Sbjct: 236 GFQPDKITFTALIEGLCTTDRIKEAFVLFQ 265



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 179/388 (46%), Gaps = 19/388 (4%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPN----SPMIEFFVSSCIRAGKCDAAKGL 213
           TYN ++  LC+ G       +F  M   G  P+    + +I+ F   C    + + A GL
Sbjct: 103 TYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMC----QFETAYGL 158

Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
           L      + + + + Y S++N L K    D+A  +F+E      +PD  T+N LI GL  
Sbjct: 159 LQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 218

Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
              + +A +    M   G  PD +T+  LI GLC  + +     L + +  K   +PD+V
Sbjct: 219 KQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMA-KQGCAPDLV 277

Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT-FNVLIDGFGKVGNMVSAEYMRER 392
           T+T ++S  C L K+  A  +     +C   P AV  +  +    G+      A  + ++
Sbjct: 278 THTVLVSKLCILRKLRPALSVVRNYPAC---PEAVILYTPIFRELGRRRGFDRAARLLQK 334

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE---MKGKNLSPNVYTFTILINALCK 449
           M   G  P+VVT+++   G    G   +G++   E   M  + + P++  + +L++  CK
Sbjct: 335 MARRGVPPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCK 391

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            +RL+ A + ++ +  + L P    YN ++   C+ G V+    ++  M  +  +PD  T
Sbjct: 392 ADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVAT 451

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIG 537
           ++ L+ G  M G+   A S  N  +  G
Sbjct: 452 WSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score = 38.9 bits (89), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 43/95 (45%)

Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
           N ++D   +A   ++  V+   +  + CKP+ +++  L+   C  G++ +A S   +M R
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
               PD  T N +I  L K    + A    +   E
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE 98


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 184/365 (50%), Gaps = 3/365 (0%)

Query: 208 DAAKG--LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + +KG  LL+Q     V+ + F+Y  L+ A  +  + D+A  MF     L    + + + 
Sbjct: 122 NVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYT 181

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           I+I G  + G  K  FE +  M   G  P++ TYN+LI+  CR  +++   ++  E+  K
Sbjct: 182 IMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-K 240

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              + + VTY  +I G C+ G++ KA G+   M    I P+  TFN+L+DG    G +  
Sbjct: 241 RGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDK 300

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A    E++   G  P +VT++ LI G+ + G  +   +L  EM+ + +SP+  T+TIL+N
Sbjct: 301 ALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              + + +  A      +K   LVP    Y  +I G C  GN+ EA+ +   M E   +P
Sbjct: 361 TFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + V +  +I G+C +    +A+    +M++ G  P+  +  S I  L K G   EA R++
Sbjct: 421 NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480

Query: 566 QRASE 570
           +  +E
Sbjct: 481 KEMTE 485



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 198/386 (51%), Gaps = 3/386 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++ + +++ CE G       +   M + G  PN  +    + +C R G  D AK + S+ 
Sbjct: 109 SFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRM 168

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + ++Y  ++N   K+    +   ++++   +   P+ +T+N LI    R G++
Sbjct: 169 DDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKL 228

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AF+ F ++   G + + VTYN LI GLCR  +V++   LL+ +K ++  +P   T+  
Sbjct: 229 SLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK-RAHINPTTRTFNM 287

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN-MVSAEYMRERMLSF 396
           ++ G C  G++DKA     ++   G+ P+ VT+N+LI GF KVGN  V +E +RE M   
Sbjct: 288 LMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVRE-MEDR 346

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P  VT++ L++ + R+  + +  ++   MK   L P+ +T+ +LI+ LC +  + +A
Sbjct: 347 GISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEA 406

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  K +    L P   +YN +I+G+CK  N  +A   + EM +    P+  ++   I  
Sbjct: 407 SKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQI 466

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDD 542
            C  G+ +EA  +  +M   G  P +
Sbjct: 467 LCKDGKSIEAKRLLKEMTEAGLKPPE 492



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 183/378 (48%), Gaps = 37/378 (9%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S+F +N+ L+ L K  N D     F EY    +Q D ++F I I+     G V K FE  
Sbjct: 72  SSFSFNNALDLLAKSGNLDRTWGFFTEYLG-RTQFDVYSFWITIKAFCENGNVSKGFELL 130

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVAR------------------------------ 314
             M + G SP++  Y  LI   CR  ++ +                              
Sbjct: 131 AQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKK 190

Query: 315 -----GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
                G EL +++K      P++ TY S+I+ YC+ GK+  A  +++E++  G+  +AVT
Sbjct: 191 GYKKDGFELYQKMKLVGVL-PNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N+LI G  + G +  AE + ERM      P   TF+ L+DG C  GQL++ L   +++K
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              L P + T+ ILI+   K    +     +++++   + P    Y  +++ F ++ +++
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIE 369

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  +   M+     PD+ T+ +LI G C+KG MVEA  ++  M+ +   P+D+  N++I
Sbjct: 370 KAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMI 429

Query: 550 SCLLKGGMPNEAFRIMQR 567
           +   K     +A + ++ 
Sbjct: 430 NGYCKECNSYKALKFLEE 447



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 180/365 (49%), Gaps = 40/365 (10%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD-MG 288
           ++++NA ++    ++++  FK        P +++FN  +  L++ G + + + FF + +G
Sbjct: 42  DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                 D+ ++   I   C    V++G ELL +++     SP+V  YT +I   C+ G +
Sbjct: 102 R--TQFDVYSFWITIKAFCENGNVSKGFELLAQMETMG-VSPNVFIYTILIEACCRNGDI 158

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  +++ M+  G+  +   + ++I+GF K G       + ++M   G LP++ T++SL
Sbjct: 159 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL 218

Query: 409 IDGYCRNGQLNQGLKLCDE-----------------------------------MKGKNL 433
           I  YCR+G+L+   K+ DE                                   MK  ++
Sbjct: 219 ITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 278

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P   TF +L++ LC   +L+ A  +L++LK   L P    YN +I GF K GN    + 
Sbjct: 279 NPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSE 338

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL- 552
           +V EME++   P KVT+TIL+        + +A  +F+ M RIG  PD  T   LI  L 
Sbjct: 339 LVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 398

Query: 553 LKGGM 557
           +KG M
Sbjct: 399 IKGNM 403



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 163/327 (49%), Gaps = 2/327 (0%)

Query: 145 FSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
           FSR++ L L  +   Y +++    + G       ++  M+  G LPN       ++   R
Sbjct: 165 FSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCR 224

Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
            GK   A  +  +     V  +   YN L+  L ++    +A  + +   R +  P T T
Sbjct: 225 DGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRT 284

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FN+L+ GL   G++ KA  +   +   G  P +VTYN LISG  +V   +   EL++E++
Sbjct: 285 FNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME 344

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
            +   SP  VTYT +++ + +   ++KA  +++ M   G+ P   T+ VLI G    GNM
Sbjct: 345 DRG-ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNM 403

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
           V A  + + M+     P+ V ++++I+GYC+     + LK  +EM    ++PNV ++   
Sbjct: 404 VEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYIST 463

Query: 444 INALCKENRLNDARRFLKQLKWNDLVP 470
           I  LCK+ +  +A+R LK++    L P
Sbjct: 464 IQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP   ++ + +    K G +D+  G + E      +    +F + I  F + GN+     
Sbjct: 70  SPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG-RTQFDVYSFWITIKAFCENGNVSKGFE 128

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M + G  P+V  ++ LI+  CRNG ++Q   +   M    L+ N Y +TI+IN   
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+    D     +++K   ++P  + YN +I  +C+ G +  A  +  E+ ++    + V
Sbjct: 189 KKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAV 248

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T+ ILI G C KG++ +A  +  +M R    P   T N L+  L   G  ++A   +++
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 92/178 (51%), Gaps = 1/178 (0%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G+ P   +F++ +D   ++G L++      E  G+    +VY+F I I A C+   
Sbjct: 64  MVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT-QFDVYSFWITIKAFCENGN 122

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++     L Q++   + P  F+Y  +I+  C+ G++D+A V+ + M++     ++  +TI
Sbjct: 123 VSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTI 182

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +I G   KG   +   ++ KM  +G  P+  T NSLI+   + G  + AF++    S+
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISK 240


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 234/481 (48%), Gaps = 43/481 (8%)

Query: 125 NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
            +++V  R +  +  L+FLE  +V + +  +  TYN ++R  C++   +    + D M S
Sbjct: 285 TTIDVFVRANRLEKALRFLERMQV-VGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPS 343

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF-RPGEVTMSTFMYNSLLNALVKQNNAD 243
            G LP+       +    +  +    + L+ +  +   +      YN+L++ L K ++AD
Sbjct: 344 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHAD 403

Query: 244 EAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDIVTYNTL 302
           EA++  K+      + D   ++ ++  L + G + +A +   +M S G C PD+VTY  +
Sbjct: 404 EALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 463

Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
           ++G CR+ EV +  +LL ++     + P+ V+YT++++G C+ GK  +A  + N      
Sbjct: 464 VNGFCRLGEVDKAKKLL-QIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQW 522

Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP---------------------- 400
             P+++T++VL+ G  K G +  A  +   M+  G+ P                      
Sbjct: 523 WSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 582

Query: 401 -------------DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
                        +VV F+++I G+C+N +L+  L + D+M   N   +V+T+T L++AL
Sbjct: 583 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDAL 642

Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPD 506
            K+ R+ +A   +K++    + P P  Y  VI  +C+   VD+   I+ +M   ++C   
Sbjct: 643 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKC--- 699

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
           K  +  +I   C  G++ EA  +  K+LR     D  T  +L+   LK G+P  A+++  
Sbjct: 700 KTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVAC 759

Query: 567 R 567
           R
Sbjct: 760 R 760



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 230/502 (45%), Gaps = 38/502 (7%)

Query: 104 LRSSY--LSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNL 161
           LRSS+    +   R L   L P     V++  D+ ++ LKF  ++       H    Y  
Sbjct: 156 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYS 215

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++  L +  +    + V   M+  G           + S  RAG+   A  +L+  +   
Sbjct: 216 MLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG 275

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V  +  + N+ ++  V+ N  ++A+   +    +   P+  T+N +I+G   +  V++A 
Sbjct: 276 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 335

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS- 340
           E   DM S GC PD V+Y T++  LC+   +    +L+K++  +     D VTY ++I  
Sbjct: 336 ELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHM 395

Query: 341 ---------------------------GY-------CKLGKMDKATGIYNEMNSCG-IKP 365
                                      GY       CK G+M +A  + NEM S G   P
Sbjct: 396 LTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 455

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
             VT+  +++GF ++G +  A+ + + M + GY P+ V++++L++G CR G+  +  ++ 
Sbjct: 456 DVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMM 515

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           +  + +  SPN  T+++L++ L KE +L++A   ++++      P P   N ++   C+ 
Sbjct: 516 NMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 575

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
           G   EA   + E   K C  + V FT +I G C    +  A+S+ + M  I    D  T 
Sbjct: 576 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 635

Query: 546 NSLISCLLKGGMPNEAFRIMQR 567
            +L+  L K G   EA  +M++
Sbjct: 636 TTLVDALGKKGRIAEATELMKK 657



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 185/429 (43%), Gaps = 39/429 (9%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI-EFFVSSCIRAGKCDAAKGLLSQF 217
           Y+ ++ +LC+ G     + + + M S GH P   +     V+   R G+ D AK LL   
Sbjct: 424 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIM 483

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                  +T  Y +LLN L +   + EA  M       +  P++ T+++L+ GL + G++
Sbjct: 484 HTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKL 543

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A +   +M   G  P  V  N L+  LCR        + ++E   K   + +VV +T+
Sbjct: 544 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG-CAINVVNFTT 602

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           VI G+C+  ++D A  + ++M          T+  L+D  GK G +  A  + ++ML  G
Sbjct: 603 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKG 662

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
             P  VT+ ++I  YC+  +++  + + ++M              ++   CK        
Sbjct: 663 IDPTPVTYRTVIHRYCQMEKVDDLVAILEKM--------------ILRQKCKT------- 701

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                           +YN VI+  C  G ++EA+ ++ ++     + D  T   L+ G+
Sbjct: 702 ----------------IYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGY 745

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
              G  + A  +  +M      PD      L   L+  G  N+   ++  +    NLQ+P
Sbjct: 746 LKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGNDNNMLLYFSLVSDNLQIP 805

Query: 578 SWKKAVPLR 586
           S    + LR
Sbjct: 806 SEATRLSLR 814



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 83/180 (46%)

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            + Y  D + + S+++   +        ++   MK + +      F  ++ +  +  +L 
Sbjct: 203 QWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLR 262

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA + L  ++   + P   + N  ID F +A  +++A   +  M+     P+ VT+  +I
Sbjct: 263 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 322

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G+C   R+ EAI + + M   GC PD ++  +++  L K     E   +M++ +++  L
Sbjct: 323 RGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 382


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 156/287 (54%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAM 203

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 263

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++MLS    PD++T+++LI G C+ G L Q   L DEM  K L P+  T+T L
Sbjct: 264 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTL 323

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 324 IDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T++I   C KG + +   +  +M R G  P  +T N L++
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 185/352 (52%), Gaps = 9/352 (2%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW----TFNILIQGLSRIGEVKKAFE 282
           ++++ L+ A ++     +A+    E +RL  +   W    T   +++ L ++   K  + 
Sbjct: 73  YVFSGLITAYLESGFLRDAI----ECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 128

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           F+ ++   G    +  +N L+   C+  ++     +   +  K    P VV+Y ++++GY
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAIT-KWGLRPSVVSYNTLMNGY 187

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            +LG +D+   + + M + G++P   T++VLI+G  K   M  A  + + ML  G +P+ 
Sbjct: 188 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 247

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VTF++LIDG+C+NG+++  +++  +M  ++LSP++ T+  LI  LCK+  L  A   + +
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 307

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    L P    Y  +IDG CK G++D A      M ++  + D+V +T LI G C +GR
Sbjct: 308 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 367

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            V+A  +  +ML +G  PD  T   +I+   K G   +  ++++    D ++
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHV 419



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 160/292 (54%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 141 SLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LVPNGVTFTTLIDGHCK 259

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++  A ++ + M   G  PD +T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 319

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 320 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V +   ++ EM+     P  VT+ +L+ G
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 166/354 (46%), Gaps = 10/354 (2%)

Query: 101 TLLLRSSYLSDT--CARYLCEK--LSPLNS----LEVIKRLDNPKLGLKFLEFSRVNLSL 152
           T  L S +L D   C R   E     P ++    LE + +L   KL   F E   +    
Sbjct: 80  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE-EILECGY 138

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
             S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    
Sbjct: 139 PASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L S      V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 258

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G V  A E +  M S   SPD++TYNTLI GLC+  ++ + H L+ E+  K    PD 
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG-LKPDK 317

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TYT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           MLS G  PD  T++ +I+ +C+ G + +G KL  EM+     P+V T+ +L+N 
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 193/413 (46%), Gaps = 1/413 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +YN+V+ + C  G       + + M  +G  P+       + +  + G  + A+    + 
Sbjct: 294 SYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEI 353

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               ++ +T +YN +++  VK  +  +A  +F+E       PD  TFN L+ G  R G+ 
Sbjct: 354 EDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKE 413

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +       D+   G   D    +  ++GLC         +LL+ +  +    P VV + S
Sbjct: 414 EDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENL-LEKGIPPSVVAFNS 472

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+ Y   G  ++A   Y  M   G+ PS+ T + L+    + G++  A      M+  G
Sbjct: 473 IIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKG 532

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +    + F+ L+DGY R G +N    L +EMKG+ + P+   F   IN LC    + DA 
Sbjct: 533 FPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAY 592

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
                +     VP  F+YN +I GFCK G ++EA  +V EM ++   PD  T  ++I G 
Sbjct: 593 DVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGL 652

Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           C +GRM  AI  F  M R+G +PD +T N+LI    K      A  +M + S+
Sbjct: 653 CKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSD 705



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 196/404 (48%), Gaps = 1/404 (0%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           ++ L+ +   YN+++    +        ++F+ MR+   +P+       V+   R GK +
Sbjct: 355 DMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEE 414

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
               LL       +   + + +  +  L      DEA+ + +        P    FN +I
Sbjct: 415 DGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSII 474

Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
                 G  ++AF  +  M  FG +P   T ++L+  L R   +      L ++  K  F
Sbjct: 475 AAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKG-F 533

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
               + +T ++ GY ++G ++ A  ++NEM   G+ P AV F   I+G    G M  A  
Sbjct: 534 PVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYD 593

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +   ML  G++P+   ++SLI G+C+ G+LN+ LKL  EM  + L P+++T  ++I  LC
Sbjct: 594 VFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLC 653

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+ R+  A      +    L P    YN +IDG+CKA +V  A+ ++ +M +   +PD  
Sbjct: 654 KQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLT 713

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           T+ I I G+C   ++  A+ I  +++ +G  P+ +T N++I+ +
Sbjct: 714 TYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAV 757



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 196/418 (46%), Gaps = 23/418 (5%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG---KCD 208
           L H     ++ +  LC  G +D    + + +   G  P+       +++   AG   +  
Sbjct: 428 LLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAF 487

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD------TW 262
            A G++ +F    +T S+   +SLL +LV++ + DEA      +  LY   D        
Sbjct: 488 YAYGIMVKF---GLTPSSSTCSSLLISLVRKGSLDEA------WIALYDMIDKGFPVTNM 538

Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
            F +L+ G  RIG V  A   + +M   G  PD V +   I+GLC    +   +++  ++
Sbjct: 539 AFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDM 598

Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
             +  F P+   Y S+I G+CK+GK+++A  +  EMN  G+ P   T N++I G  K G 
Sbjct: 599 -LRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGR 657

Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
           M  A      M   G  PD+VT+++LIDGYC+   +     L  +M      P++ T+ I
Sbjct: 658 MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNI 717

Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
            I+  C   ++N A   L++L    +VP    YN +I+  C    +D A ++ A++ +  
Sbjct: 718 RIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMA 776

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDIT---VNSLISCLLKGGM 557
             P+ VT  +L+   C +G   +AI    K+  I    D+ T   +N     L +GG+
Sbjct: 777 FVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRAYRALEEGGV 834



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 3/334 (0%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
           ++L+ A VK     EA+ +  +   +   P+    +IL + L R G+    ++ F D+  
Sbjct: 191 DTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 250

Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEV-KFKSEFSPDVVTYTSVISGYCKLGKM 348
            G  P+  T+N LI   CR      G  LL  + KF+ E  PDV +Y  VI+  C  G+ 
Sbjct: 251 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCE--PDVYSYNIVINANCLKGQS 308

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
             A  + N M   G KPS  TF  +ID F K GN+  A    + +   G   + + ++ +
Sbjct: 309 SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 368

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           I GY +   ++Q   L +EM+ K++ P+  TF  L+    +  +  D  R L+ L  + L
Sbjct: 369 ISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGL 428

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
           +    + +  + G C AG  DEA  ++  + EK   P  V F  +I  +   G    A  
Sbjct: 429 LHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFY 488

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
            +  M++ G  P   T +SL+  L++ G  +EA+
Sbjct: 489 AYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAW 522



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/485 (21%), Positives = 190/485 (39%), Gaps = 106/485 (21%)

Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
           F   + +M++  +  +H     +   MR  G  PN   I       IRAG C A   L  
Sbjct: 187 FSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKL-- 244

Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
                                            F +  R    P+ +TFN+LI    R G
Sbjct: 245 ---------------------------------FGDVVRKGPCPNNFTFNLLILEFCRKG 271

Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
             +      + MG F C PD+ +YN +I+  C   + +    LL  +  ++   P + T+
Sbjct: 272 WTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLN-LMIENGCKPSIATF 330

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
            ++I  +CK G ++ A   ++E+   G+  + + +N++I G+ K  ++  A  + E M +
Sbjct: 331 CTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRT 390

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
              +PD +TF++L+ G+ R G+   G +L  ++    L  +     + +  LC   R ++
Sbjct: 391 KDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDE 450

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKA------------------------------ 485
           A + L+ L    + P    +N +I  +  A                              
Sbjct: 451 AMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLI 510

Query: 486 -----GNVDEANVIVAEMEEKRCKPDKVTFTILIIGH----------------------- 517
                G++DEA + + +M +K      + FT+L+ G+                       
Sbjct: 511 SLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFP 570

Query: 518 ------------CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
                       C+ G M +A  +F+ MLR G  P++   NSLI    K G  NEA +++
Sbjct: 571 DAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLV 630

Query: 566 QRASE 570
           +  ++
Sbjct: 631 REMNK 635



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 2/303 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V   L  S  T + ++ SL   G  D   +    M   G    +      +    R G  
Sbjct: 494 VKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAV 553

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A+ L ++ +   V      + + +N L       +A  +F +  R    P+ + +N L
Sbjct: 554 NMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSL 613

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I G  ++G++ +A +   +M   G  PDI T N +I GLC+   +    E   ++  +  
Sbjct: 614 IGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDM-CRMG 672

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
            SPD+VTY ++I GYCK   +  A  +  +M+  G +P   T+N+ I G+  V  +  A 
Sbjct: 673 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 732

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            + E ++S G +P+ VT++++I+  C N  L+  + L  ++      PN  T  +L++  
Sbjct: 733 MILEELISVGIVPNTVTYNTMINAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQF 791

Query: 448 CKE 450
           CK+
Sbjct: 792 CKQ 794


>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
 gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
          Length = 668

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 187/384 (48%), Gaps = 2/384 (0%)

Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
           P++P+    +S+  RA   DAA  LL+  +   +T  +    +L++AL       EA  +
Sbjct: 226 PDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEAL 285

Query: 249 FKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLC 307
           F E+F     +P T  +N L++G  RIG +K A +   +M   G +PD  TY+ L+    
Sbjct: 286 FLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYT 345

Query: 308 RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSA 367
           R         LLKE++      P    ++ +++G+   G   KA  +  EM + G++P  
Sbjct: 346 RAGRWESARILLKEMEADG-VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDR 404

Query: 368 VTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDE 427
             +NV+ID FGK   +  A    +RM      PDVVT+++LID +C+ G+ ++ ++L +E
Sbjct: 405 HFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEE 464

Query: 428 MKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
           M+  N  P   T+ I+IN L ++ R       L ++K   LVP    Y  ++D + ++G 
Sbjct: 465 MRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 524

Query: 488 VDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNS 547
             EA   +  M+    KP    +  L+  +  +G    A+++   M   G     + +NS
Sbjct: 525 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNS 584

Query: 548 LISCLLKGGMPNEAFRIMQRASED 571
           LI+   +     EAF ++Q   E+
Sbjct: 585 LINAFGEDRRVVEAFSVLQFMKEN 608



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 187/416 (44%), Gaps = 37/416 (8%)

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL-LSQFRPG 220
           ++ +     L D+   +    ++ G  P S  +   +S+   AG+   A+ L L  F  G
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAG 293

Query: 221 EVTMSTFMYNSLLNALVK---QNNA--------------DEAVY---------------- 247
           E+   T  YN+LL   V+     NA              DEA Y                
Sbjct: 294 EIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353

Query: 248 --MFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             + KE      +P ++ F+ ++ G    G+ +KAF    +M + G  PD   YN +I  
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413

Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
             + N +    +    ++ + E  PDVVT+ ++I  +CK G+ D+A  ++ EM      P
Sbjct: 414 FGKYNCLGHAMDAFDRMR-EEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPP 472

Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
              T+N++I+  G+       E M   M   G +P+++T+++L+D Y R+G+  + +   
Sbjct: 473 GTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI 532

Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
           + MK   L P+   +  L+NA  +    + A   +K +K + L     + N +I+ F + 
Sbjct: 533 EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGED 592

Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
             V EA  ++  M+E   +PD +T+T L+       +  +   I+ +M+  GCAPD
Sbjct: 593 RRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 648



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 158/364 (43%), Gaps = 7/364 (1%)

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS---QPDTWTFNILIQ 269
           LLS  R  +       Y+ LL +L+   +  +A  + +    L     +PD   F+ LI 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
             +R      A E      + G +P       LIS L     VA    L  E     E  
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIK 296

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P    Y +++ GY ++G +  A  + +EM+ CG+ P   T+++L+D + + G   SA  +
Sbjct: 297 PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            + M + G  P    FS ++ G+   G   +   +  EM+   + P+ + + ++I+   K
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
            N L  A     +++  ++ P    +N +ID  CK G  D A  +  EM E  C P   T
Sbjct: 417 YNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTT 476

Query: 510 FTILI--IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           + I+I  +G   +   VEA  + ++M   G  P+ IT  +L+    + G   EA   ++ 
Sbjct: 477 YNIMINLLGEQERWEGVEA--MLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA 534

Query: 568 ASED 571
              D
Sbjct: 535 MKAD 538



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 167/372 (44%), Gaps = 2/372 (0%)

Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           FLEF      +    + YN +++    +G   + + V D M   G  P+       V + 
Sbjct: 286 FLEFFLAG-EIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 344

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
            RAG+ ++A+ LL +     V  S+++++ +L     + +  +A  + +E      +PD 
Sbjct: 345 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDR 404

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             +N++I    +   +  A + F  M      PD+VT+NTLI   C+     R  EL +E
Sbjct: 405 HFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEE 464

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           ++ +S   P   TY  +I+   +  + +    + +EM   G+ P+ +T+  L+D +G+ G
Sbjct: 465 MR-ESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSG 523

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
               A    E M + G  P    + +L++ Y + G  +  L +   MK   L  ++    
Sbjct: 524 RYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLN 583

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
            LINA  ++ R+ +A   L+ +K N L P    Y  ++    +    D+  VI  EM   
Sbjct: 584 SLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITS 643

Query: 502 RCKPDKVTFTIL 513
            C PD+    +L
Sbjct: 644 GCAPDRKARAML 655



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 36/325 (11%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TY+L++ +    G  +S +++   M +DG  P+S +    ++     G    A  +L + 
Sbjct: 336 TYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREM 395

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
           +   V      YN +++   K N    A+  F        +PD  T+N LI    + G  
Sbjct: 396 QASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRH 455

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
            +A E F +M    C P   TYN +I+ L           +L E+K +    P+++TYT+
Sbjct: 456 DRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMK-EQGLVPNIITYTT 514

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF--------------------------- 370
           ++  Y + G+  +A      M + G+KPS   +                           
Sbjct: 515 LVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADG 574

Query: 371 --------NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
                   N LI+ FG+   +V A  + + M   G  PDV+T+++L+    R  Q ++  
Sbjct: 575 LEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVP 634

Query: 423 KLCDEMKGKNLSPNVYTFTILINAL 447
            + +EM     +P+     +L +AL
Sbjct: 635 VIYEEMITSGCAPDRKARAMLRSAL 659



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 113/283 (39%), Gaps = 40/283 (14%)

Query: 294 PDIVTYNTLISGLCRVNE---VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
           PD+ +Y+ L++ L    +    A    LL +++ +S   PD   ++ +IS + +    D 
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLR-ESRLEPDAPLFSDLISAFARAALPDA 246

Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM-RERMLSFGYLPDVVTFSSLI 409
           A  +     + G+ P +     LI   G  G +  AE +  E  L+    P    +++L+
Sbjct: 247 ALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALL 306

Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
            GY R G L    ++ DEM    ++P+  T+++L                          
Sbjct: 307 KGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLL-------------------------- 340

Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
                    +D + +AG  + A +++ EME    KP    F+ ++ G   +G   +A ++
Sbjct: 341 ---------VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAV 391

Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
             +M   G  PD    N +I    K      A     R  E++
Sbjct: 392 LREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEE 434


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 200/406 (49%), Gaps = 2/406 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+ G  D  + +   M  +G  P +      ++   R G   +   L  +  
Sbjct: 411 YNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMA 470

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + + +L+N   K    DEA  +F +       P+  TFN++I+G   +G ++
Sbjct: 471 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIR 530

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KAF+ +  M   G  PD  TY +LISGLC  + V++ +E + +++  S    +  + T++
Sbjct: 531 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE-NSYAVLNNFSLTAL 589

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G+ + G+  +   +++EM   G+K   V+F +++    K  +   +  +   M   G 
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD + ++ +ID   +   + Q L   D+M     SPN  T T+LIN LCK   L  A  
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 709

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K++   +++P  F YN  +D F   G++++A  + + M +       V+F ILI G C
Sbjct: 710 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLC 768

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             G++ EAI + +K+   G +PD I+ +++I  L K G  N+AF +
Sbjct: 769 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 194/408 (47%), Gaps = 3/408 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           VN+ +     TY  ++   C M  L  ++++  D +R  G +P+     F +    +   
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRL-GFVPSEANCSFMIDELRKKEL 318

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            + A  L  +     +  + F YN+L++ L K    D+A  +FKE      +P+  T+ I
Sbjct: 319 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI  L + G ++ A   F  M   G    +  YN+LI+G C+   + R   LL  +  K 
Sbjct: 379 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM-VKE 437

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             +P   +Y+ +I+G C+ G +     ++ EM   GI  +  TF  LI+GF K   M  A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + ++M+    +P+ VTF+ +I+GYC  G + +  +L D+M    L P+ YT+  LI+ 
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LC  + ++ A  F+  L+ +  V   F    ++ GF + G   E   +  EM  +  K D
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            V+FTI++     +    ++  +F +M   G  PDDI    +I  L K
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSK 665



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 192/427 (44%), Gaps = 46/427 (10%)

Query: 178 VFDYMRSDG-HLPNSPMIEFFVSSCIRA----GKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           +FD M   G HL      E+  ++ IRA       D A+GL+ +     V  S   YN L
Sbjct: 185 LFDKMLQSGVHLD-----EYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVL 239

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM----- 287
           +  L K     EAV +      +    D  T+  L+ G  R+ E++ A    +DM     
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299

Query: 288 ------------------------------GSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
                                         G  G  P++  YN LI  LC+         
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L KE+  +    P+ VTY  +I   CK G ++ A  ++++M   GIK +   +N LI+G+
Sbjct: 360 LFKEMAGRG-LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G++  A  +   M+  G  P   ++S LI G CRNG L+  ++L  EM  + ++ N 
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           YTFT LIN  CK+ ++++A R   ++  ++++P    +N +I+G+C  GN+ +A  +  +
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M E   KPD  T+  LI G C+   + +A      +       ++ ++ +L+    + G 
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 558 PNEAFRI 564
             E + +
Sbjct: 599 FTETYHL 605



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 176/375 (46%), Gaps = 9/375 (2%)

Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA----VYMFKEYFRL 255
           S ++  +   A+ L  +     V +  ++Y + + A  +  N D A    V M  E  + 
Sbjct: 172 SLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKA 231

Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
            + P    +N+L+ GL +   V++A E    M + G + D VTY TL+ G CR+ E+   
Sbjct: 232 SAVP----YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 287

Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
             +  ++  +  F P     + +I    K   +++A  +  ++   G+ P+   +N LID
Sbjct: 288 LRITHDM-IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346

Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
              K      A+ + + M   G  P+ VT++ LI   C+ G +   L L D+M+ K +  
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKV 406

Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
            VY +  LIN  CK+  L+ AR  L  +    L P    Y+P+I G C+ G++     + 
Sbjct: 407 TVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELH 466

Query: 496 AEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
            EM E+    +  TFT LI G C   +M EA  +F+KM+     P+++T N +I      
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526

Query: 556 GMPNEAFRIMQRASE 570
           G   +AF++  +  E
Sbjct: 527 GNIRKAFQLYDQMVE 541



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 188/402 (46%), Gaps = 13/402 (3%)

Query: 159 YNLVMRSLCE-MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           YN++M  LC+ M + ++V+V  + M + G   +       V    R  + + A  +    
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVK-NVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 294

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P E   S FM    ++ L K+   +EA  +  +   L   P+ + +N LI  L 
Sbjct: 295 IRLGFVPSEANCS-FM----IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 349

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +      A   F +M   G  P+ VTY  LI  LC+   +     L  +++ K      V
Sbjct: 350 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG-IKVTV 408

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             Y S+I+GYCK G +D+A G+ + M   G+ P+A +++ LI G  + G++ S   +   
Sbjct: 409 YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 468

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G   +  TF++LI+G+C++ ++++  +L D+M   N+ PN  TF ++I   C    
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 528

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A +   Q+    L P  + Y  +I G C    V +AN  VA++E      +  + T 
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           L+ G   +GR  E   ++++M   G   D ++   ++   LK
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 168/346 (48%), Gaps = 1/346 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +T++ +  + +L +LVK      A  +F +  +     D + +   I+       +  A 
Sbjct: 159 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 218

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                M S G     V YN L+ GLC+   V    E+ K V      + D VTY +++ G
Sbjct: 219 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV-KNVMVNIGVTADEVTYRTLVYG 277

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +C++ +++ A  I ++M   G  PS    + +ID   K   +  A  +  ++   G +P+
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V  +++LID  C+N + +   +L  EM G+ L PN  T+ ILI+ALCK   + DA     
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           +++   +    + YN +I+G+CK G++D A  +++ M ++   P   +++ LI G C  G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +   + +  +M   G A ++ T  +LI+   K    +EA R+  +
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 158/359 (44%), Gaps = 2/359 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C +G       ++D M   G  P++      +S          A   ++  
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++ F   +LL    ++    E  +++ E      + D  +F I++    +  + 
Sbjct: 575 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 634

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K+   F +M   G  PD + Y  +I  L +   + +      ++     +SP+ VT+T 
Sbjct: 635 EKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG-YSPNTVTHTV 693

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK G +  A  +  EM +  + P+  T+N  +D F   G+M  A+ +   ML  G
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-G 752

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +L  +V+F+ LI G C+ G++ + + L  ++     SP+  +++ +I+ LCK   +N A 
Sbjct: 753 HLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAF 812

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               ++ +  L P    YN  I      G  D+A  I   M     +P+  T+  L+ G
Sbjct: 813 ELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 138/334 (41%), Gaps = 35/334 (10%)

Query: 148 VNLSLNHSFKTYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           V + L     TY  ++  LC   G+  + + V D   S   L N  +         R G+
Sbjct: 540 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYG-FFREGR 598

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
                 L  +     V +    +  ++ A +KQ++ +++  +F+E      +PD   +  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK--- 323
           +I  LS+   + +A   +  M   G SP+ VT+  LI+ LC+   +     L KE+    
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 324 ----------FKSEFSPD--------------------VVTYTSVISGYCKLGKMDKATG 353
                     F   F+ +                    +V++  +I G CK GK+ +A  
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAID 778

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           + +++   G  P  ++++ +I    K+G++  A  +   ML  G  PDVV ++  I    
Sbjct: 779 LMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCN 838

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +G+ ++ L +   M    + PN  T+  L++ +
Sbjct: 839 VHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 161/334 (48%), Gaps = 1/334 (0%)

Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
           ++ LL A+ K N  +  + +F+    L    D ++F  LI    R   +  A      M 
Sbjct: 82  FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
             G  P IVT+ +L++G C VN       L+ ++     + P+VV Y ++I   C+ G++
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI-VGLGYEPNVVIYNTIIDSLCEKGQV 200

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           + A  +   M   GI+P  VT+N LI      G    +  +   M+  G  PDV+TFS+L
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260

Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
           ID Y + GQL +  K  +EM  ++++PN+ T+  LIN LC    L++A++ L  L     
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320

Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
            P    YN +I+G+CKA  VD+   I+  M       D  T+  L  G+C  G+   A  
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380

Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           +  +M+  G  PD  T N L+  L   G   +A 
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 177/374 (47%), Gaps = 4/374 (1%)

Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGE---VTMSTFMYNSLLNALVKQNNADEAVYM 248
           P I  F    I   K +  + ++S FR  E   ++   + + +L++   +      A+  
Sbjct: 77  PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136

Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
             +  +L  +P   TF  L+ G   +    +A      +   G  P++V YNT+I  LC 
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196

Query: 309 VNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAV 368
             +V    ++LK +K K    PDVVTY S+I+     G    +  I ++M   GI P  +
Sbjct: 197 KGQVNTALDVLKHMK-KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255

Query: 369 TFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM 428
           TF+ LID +GK G ++ A+     M+     P++VT++SLI+G C +G L++  K+ + +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315

Query: 429 KGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV 488
             K   PN  T+  LIN  CK  R++D  + L  +  + +    F YN +  G+C+AG  
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
             A  ++  M      PD  TF IL+ G C  G++ +A+     + +       IT N +
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNII 435

Query: 549 ISCLLKGGMPNEAF 562
           I  L K     +A+
Sbjct: 436 IKGLCKADKVEDAW 449



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 184/358 (51%), Gaps = 6/358 (1%)

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
           F P  VT     + SL+N     N   EA+ +  +   L  +P+   +N +I  L   G+
Sbjct: 145 FEPSIVT-----FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           V  A +    M   G  PD+VTYN+LI+ L           +L ++  +   SPDV+T++
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM-MRMGISPDVITFS 258

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           ++I  Y K G++ +A   YNEM    + P+ VT+N LI+G    G +  A+ +   ++S 
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G+ P+ VT+++LI+GYC+  +++ G+K+   M    +  + +T+  L    C+  + + A
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            + L ++    + P  + +N ++DG C  G + +A V + ++++ +     +T+ I+I G
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            C   ++ +A  +F  +   G +PD IT  +++  L +  +  EA  + ++  ++  L
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGL 496



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 166/360 (46%), Gaps = 13/360 (3%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           + L    S  T+  ++   C +        + D +   G+ PN  +    + S    G+ 
Sbjct: 141 MKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQV 200

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
           + A  +L   +   +      YNSL+  L        +  +  +  R+   PD  TF+ L
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK---- 323
           I    + G++ +A + + +M     +P+IVTYN+LI+GLC        H LL E K    
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI-------HGLLDEAKKVLN 313

Query: 324 --FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
                 F P+ VTY ++I+GYCK  ++D    I   M+  G+     T+N L  G+ + G
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373

Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
              +AE +  RM+S G  PD+ TF+ L+DG C +G++ + L   ++++       + T+ 
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433

Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
           I+I  LCK +++ DA      L    + P    Y  ++ G  +     EA+ +  +M+++
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 1/292 (0%)

Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVI 339
           A   F DM      P IV ++ L+  + ++N+      L + ++     S D+ ++T++I
Sbjct: 63  ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLG-ISHDLYSFTTLI 121

Query: 340 SGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYL 399
             +C+  ++  A     +M   G +PS VTF  L++GF  V     A  + ++++  GY 
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181

Query: 400 PDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
           P+VV ++++ID  C  GQ+N  L +   MK   + P+V T+  LI  L        + R 
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L  +    + P    ++ +ID + K G + EA     EM ++   P+ VT+  LI G C+
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
            G + EA  + N ++  G  P+ +T N+LI+   K    ++  +I+   S D
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 151/324 (46%), Gaps = 2/324 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
           V L    +   YN ++ SLCE G  ++   V  +M+  G  P+       ++    +G  
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235

Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
             +  +LS      ++     +++L++   K+    EA   + E  +    P+  T+N L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295

Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
           I GL   G + +A +    + S G  P+ VTYNTLI+G C+   V  G ++L  V  +  
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC-VMSRDG 354

Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
              D  TY ++  GYC+ GK   A  +   M SCG+ P   TFN+L+DG    G +  A 
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414

Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
              E +     +  ++T++ +I G C+  ++     L   +  K +SP+V T+  ++  L
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474

Query: 448 CKENRLNDARRFLKQLKWND-LVP 470
            ++    +A    ++++  D L+P
Sbjct: 475 RRKRLWREAHELYRKMQKEDGLMP 498


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 156/287 (54%), Gaps = 1/287 (0%)

Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
           FNIL+    + G+++ A   F  +  +G  P +V+YNTL++G  R+ ++  G  L K   
Sbjct: 145 FNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL-KSAM 203

Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
             S   PDV TY+ +I+G CK  KMD A  +++EM   G+ P+ VTF  LIDG  K G +
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 263

Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
             A  + ++MLS    PD++T+++LI G C+ G L Q   L DEM  K L P+  T+T L
Sbjct: 264 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTL 323

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
           I+  CKE  L+ A    K++   ++      Y  +I G C+ G   +A  ++ EM     
Sbjct: 324 IDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383

Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
           KPD  T+T++I   C KG + +   +  +M R G  P  +T N L++
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 161/292 (55%), Gaps = 1/292 (0%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S + +N L++   K  +   A  +F    +   +P   ++N L+ G  R+G++ + F   
Sbjct: 141 SLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 200

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
             M + G  PD+ TY+ LI+GLC+ +++   +EL  E+  K    P+ VT+T++I G+CK
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG-LVPNGVTFTTLIDGHCK 259

Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
            G++D A  IY +M S  + P  +T+N LI G  K G++  A ++ + M   G  PD +T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKIT 319

Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
           +++LIDG C+ G L+   +    M  +N+  +   +T LI+ LC+E R  DA + L+++ 
Sbjct: 320 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 379

Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              L P    Y  +I+ FCK G+V + + ++ EM+     P  VT+ +L+ G
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 185/352 (52%), Gaps = 9/352 (2%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW----TFNILIQGLSRIGEVKKAFE 282
           ++++ L+ A ++     +A+    E +RL  +   W    T   +++ L ++   K  + 
Sbjct: 73  YVFSGLITAYLESGFLRDAI----ECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWG 128

Query: 283 FFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGY 342
           F+ ++   G    +  +N L+   C+  ++     +   +  K    P VV+Y ++++GY
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAIT-KWGLRPSVVSYNTLMNGY 187

Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
            +LG +D+   + + M + G++P   T++VLI+G  K   M  A  + + ML  G +P+ 
Sbjct: 188 IRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 247

Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
           VTF++LIDG+C+NG+++  +++  +M  ++LSP++ T+  LI  LCK+  L  A   + +
Sbjct: 248 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE 307

Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
           +    L P    Y  +IDG CK G++D A      M ++  + D+V +T LI G C +GR
Sbjct: 308 MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGR 367

Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            V+A  +  +ML +G  PD  T   +I+   K G   +  ++++    D ++
Sbjct: 368 SVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 167/354 (47%), Gaps = 10/354 (2%)

Query: 101 TLLLRSSYLSDT--CARYLCEK--LSPLNS----LEVIKRLDNPKLGLKFLEFSRVNLSL 152
           T  L S +L D   C R   E     P+++    LE + +L   KL   F E   +    
Sbjct: 80  TAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYE-EILECGY 138

Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
             S   +N++M   C+ G     Q VFD +   G  P+       ++  IR G  D    
Sbjct: 139 PASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198

Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
           L S      V    + Y+ L+N L K++  D+A  +F E       P+  TF  LI G  
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 258

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           + G V  A E +  M S   SPD++TYNTLI GLC+  ++ + H L+ E+  K    PD 
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG-LKPDK 317

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
           +TYT++I G CK G +D A      M    I+   V +  LI G  + G  V AE M   
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
           MLS G  PD  T++ +I+ +C+ G + +G KL  EM+     P+V T+ +L+N 
Sbjct: 378 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 194/403 (48%), Gaps = 17/403 (4%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL--- 213
           + +   +R L   G  D VQ+    MR  G       +   V +  RAG  D A      
Sbjct: 62  RAHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYR 121

Query: 214 ----LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
               L   RP     +  +YN L++AL+++N       +     +   QP+ +T+N+L++
Sbjct: 122 AVHDLGCARP----TAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVR 177

Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
            L +   V  A +   +M + GC PD VTY T++S LC +  V    E+L      S   
Sbjct: 178 ALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVL------SAAP 231

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
           P   +Y +VI   C+  +M +   +  +M   G++P+ +T+  +++ F K G +  A  +
Sbjct: 232 PVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAI 291

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
             RM+  G  P+V TF++L+ G   +G+++  L +   M  +  +P+  ++ +LI  LC 
Sbjct: 292 LARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCS 351

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
              L  A   L  ++ +   P    Y+ +IDGF KAG++D A  I  +M    CKP+ V 
Sbjct: 352 VGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVV 411

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
           +T ++   C K    +A S+ +KML   C P+ +T N+LI  L
Sbjct: 412 YTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSL 454



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 191/401 (47%), Gaps = 10/401 (2%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           TYNL++R+LC+     + + + D M + G  P+       VS+    G+ D A  +LS  
Sbjct: 171 TYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA 230

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
            P   +     YN+++ AL ++    E   +  +      QP+  T+  ++    + GE+
Sbjct: 231 PPVAAS-----YNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGEL 285

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK--FKSEFSPDVVTY 335
           + A      M   GC+P++ T+  L+ GL   N+  R H+ L   K      ++P  V+Y
Sbjct: 286 RMACAILARMVITGCTPNVATFTALVGGL--FND-GRVHDALDMWKCMVAEGWAPSTVSY 342

Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
             +I G C +G +  A+ + N+M   G  P+A T++ LIDGF K G++  A  +   M  
Sbjct: 343 NVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTR 402

Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
            G  P+VV +++++  +C+    NQ   L D+M  +N  PN  TF  LI +LC   R+  
Sbjct: 403 SGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGR 462

Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
           A     +++ +   P    YN ++ G  + GN  +A  +V EM+    +   VT+  ++ 
Sbjct: 463 ALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVS 522

Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
           G C      EA+    +M+  G  PD  T  ++I    K G
Sbjct: 523 GLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEG 563



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 189/411 (45%), Gaps = 6/411 (1%)

Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           + YN ++ +L    +  +V +V   MR DG  PN       V +  +  +  AA+ +L +
Sbjct: 135 RLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDE 194

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                       Y ++++AL      DEA  +        + P   ++N +I  L R   
Sbjct: 195 MATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSA-----APPVAASYNAVILALCREFR 249

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +++ F    DM   G  P+++TY T+++  C+  E+     +L  +   +  +P+V T+T
Sbjct: 250 MQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVI-TGCTPNVATFT 308

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++ G    G++  A  ++  M + G  PS V++NVLI G   VG++  A  +   M   
Sbjct: 309 ALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQH 368

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+  T+S+LIDG+ + G L+  + + ++M      PNV  +T ++   CK+   N A
Sbjct: 369 GCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQA 428

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
              + ++   +  P    +N +I   C    V  A  +  EM    C P+  T+  L+ G
Sbjct: 429 ESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHG 488

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
              +G   +A+ +  +M   G     +T N+++S L +  M  EA   + R
Sbjct: 489 LFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGR 539



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 187/393 (47%), Gaps = 3/393 (0%)

Query: 158 TYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           +YN V+ +LC E  + +   VV D M   G  PN       V++  +AG+   A  +L++
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGD-MVGRGLQPNVITYTTIVNAFCKAGELRMACAILAR 294

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
                 T +   + +L+  L       +A+ M+K        P T ++N+LI+GL  +G+
Sbjct: 295 MVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGD 354

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
           +K A     DM   GC P+  TY+TLI G  +  ++     +  ++  +S   P+VV YT
Sbjct: 355 LKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMT-RSGCKPNVVVYT 413

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
           +++  +CK    ++A  + ++M      P+ VTFN LI        +  A  +   M   
Sbjct: 414 NMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRH 473

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P+  T++ L+ G  R G     L++  EM+   +  ++ T+  +++ LC+     +A
Sbjct: 474 GCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREA 533

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
             F+ ++    + P  F +  +I  +CK G V  A  I+  M    C  + + +TIL+  
Sbjct: 534 MFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAE 593

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
            C + ++ +A+    KML  G  P+ +T N L+
Sbjct: 594 LCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLV 626



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 36/327 (11%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           S  +YN+++R LC +G       V + M   G  PN+      +    +AG  D A  + 
Sbjct: 338 STVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIW 397

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
           +         +  +Y +++    K+   ++A  +  +       P+T TFN LI+ L   
Sbjct: 398 NDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNC 457

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
             V +A   F++M   GC P+  TYN L+ GL R        +++ E++        +VT
Sbjct: 458 RRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQ-NHGIELSLVT 516

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y +V+SG C++    +A      M   GI+P A TF                        
Sbjct: 517 YNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTF------------------------ 552

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
                      +++I  YC+ G++     +   M   N   N+  +TIL+  LC +++L 
Sbjct: 553 -----------TAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLE 601

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDG 481
           DA  +L ++ +  + P    +N ++ G
Sbjct: 602 DAMVYLLKMLYEGIYPNTVTWNVLVRG 628



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 48/97 (49%)

Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
           P +YN +ID   +   V    ++   M +   +P+  T+ +L+   C   R+  A  + +
Sbjct: 134 PRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLD 193

Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           +M   GC PDD+T  +++S L   G  +EA  ++  A
Sbjct: 194 EMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA 230



 Score = 42.4 bits (98), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 4/127 (3%)

Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
           N  +  S  TYN V+  LC+M +          M   G  P++      + +  + G+  
Sbjct: 507 NHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVR 566

Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA-VYMFKEYFR-LYSQPDTWTFNI 266
            A  +L          +  +Y  L+  L  Q+  ++A VY+ K  +  +Y  P+T T+N+
Sbjct: 567 MAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIY--PNTVTWNV 624

Query: 267 LIQGLSR 273
           L++G+ R
Sbjct: 625 LVRGVFR 631


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 204/416 (49%), Gaps = 2/416 (0%)

Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFV 198
           G+K +E SR       +   YN ++   C+ G  +S   +F  ++  G +P        V
Sbjct: 227 GIKLIE-SRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLV 285

Query: 199 SSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ 258
           +   + G  +A   LL + +   ++++  MYN++++A  K     +A    KE      +
Sbjct: 286 NGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCE 345

Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
           PD  T+N LI      GEV++A +        G +P+ +TY  L+ G C+  E  +  + 
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L E+   S    D+++Y ++I G    G++D A  I + M + GI P A  +NVL++G  
Sbjct: 406 LIEMS-TSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLF 464

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
           K G +  A+ M   ML     PD   +++L+DG+ R+G L++  KL   +  K L P V 
Sbjct: 465 KKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV 524

Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
            + ++I    K   +++A   + +++    VP  F ++ +IDG+ K  N++    I   M
Sbjct: 525 GYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLM 584

Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            ++ CKP+ VT+T LI G+C KG    A  +F+ M   G  P  +T + LI    K
Sbjct: 585 VKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 206/413 (49%), Gaps = 6/413 (1%)

Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
           T +++++ LC  G + D ++++ +     G +PN       +    + G+ ++A  L  +
Sbjct: 210 TTSIMVKGLCLKGRIEDGIKLI-ESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKK 268

Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
            +      +   + SL+N   K    +    +  E        +   +N +I    ++G 
Sbjct: 269 LKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGF 328

Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
             KA +   +M    C PD+VTYNTLI+  C   EV    +LL++   +   +P+ +TYT
Sbjct: 329 DIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQT-IRRGLAPNKLTYT 387

Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
            ++ GYCK G+  KAT    EM++ G++   +++  LI G    G + +A  +R+RM++ 
Sbjct: 388 PLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR 447

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G LPD   ++ L++G  + G+L+    +  EM  +N++P+ + +  L++   +   L++A
Sbjct: 448 GILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEA 507

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
           ++  + +    L P    YN +I GF K+G +D A + + +M      PD  TF+ +I G
Sbjct: 508 KKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDG 567

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIMQ 566
           +  +  M   + IF  M++  C P+ +T  SLI+   + G   M  + F +M+
Sbjct: 568 YVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMR 620



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 221/448 (49%), Gaps = 15/448 (3%)

Query: 129 VIKRLDNPKLGLKFLEFSRVN-LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGH 187
           V+ R+++ +LGLKF +++  N LS + +  +Y+ +++ L    +   ++   + M++   
Sbjct: 70  VLDRINDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKET 129

Query: 188 LPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM-----STFMYNSLLNALVKQNNA 242
           +P    +   + +    G  D A     +   G V +     ST+  NSLLN LVK    
Sbjct: 130 IPTREALSDVLCAYADVGLVDKA----LEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRI 185

Query: 243 DEAVYMFKEYFRLYSQP----DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
           + A  ++ E     +      D +T +I+++GL   G ++   +        GC P+IV 
Sbjct: 186 ETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVF 245

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           YNTLI G C+  EV   ++L K++K K  F P + T+ S+++G+CK+G  +    +  EM
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKG-FIPTLQTFGSLVNGFCKMGMFEAIDLLLLEM 304

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
              G+  +   +N +ID   K+G  + A+   + M      PD+VT+++LI+ +C  G++
Sbjct: 305 KDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEV 364

Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
            +  KL ++   + L+PN  T+T L++  CK+     A  +L ++  + L      Y  +
Sbjct: 365 EEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGAL 424

Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
           I G   AG VD A  I   M  +   PD   + +L+ G   KG++  A  +  +ML    
Sbjct: 425 IHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484

Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQ 566
           APD     +L+   ++ G  +EA ++ Q
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEAKKLFQ 512



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 190/396 (47%), Gaps = 1/396 (0%)

Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
           + +T+  ++   C+MG+ +++ ++   M+  G   N  M    + +  + G    AK  L
Sbjct: 277 TLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTL 336

Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
            +            YN+L+N    +   +EA  + ++  R    P+  T+  L+ G  + 
Sbjct: 337 KEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQ 396

Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
           GE  KA ++  +M + G   D+++Y  LI GL    EV     + ++        PD   
Sbjct: 397 GEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTI-RDRMMNRGILPDANI 455

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           Y  +++G  K GK+  A  +  EM    I P A  +  L+DGF + GN+  A+ + + ++
Sbjct: 456 YNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLII 515

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
             G  P VV ++ +I G+ ++G ++  +   D+M+  +  P+++TF+ +I+   K++ +N
Sbjct: 516 EKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMN 575

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
              +    +   +  P    Y  +I+G+C+ G    A  + + M     KP  VT++ILI
Sbjct: 576 AVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILI 635

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
              C + ++ +A+S F  ML   C P+D   + L++
Sbjct: 636 GSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVN 671



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/465 (22%), Positives = 208/465 (44%), Gaps = 44/465 (9%)

Query: 143 LEFSRVNLSLNHSFKTYNLVMRSLC---EMGLHD-SVQVVFDYMRSDGHLPNSPMIEFFV 198
           +EF+   +    +  T   +   LC   ++GL D +++V    ++    LP++      +
Sbjct: 117 IEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLL 176

Query: 199 SSCIRAGKCDAAKGLLSQF----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
           +  ++  + + A  L  +        ++ +  +  + ++  L  +   ++ + + +  + 
Sbjct: 177 NLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWG 236

Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
               P+   +N LI G  + GEV+ A++ F  +   G  P + T+ +L++G C++     
Sbjct: 237 KGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEA 296

Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
              LL E+K +   S +V  Y ++I    KLG   KA     EM+    +P  VT+N LI
Sbjct: 297 IDLLLLEMKDRG-LSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLI 355

Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN------------------- 415
           + F   G +  AE + E+ +  G  P+ +T++ L+ GYC+                    
Sbjct: 356 NHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLE 415

Query: 416 ----------------GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
                           G+++  L + D M  + + P+   + +L+N L K+ +L+ A+  
Sbjct: 416 VDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVM 475

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
           L ++   ++ P  F+Y  ++DGF + GN+DEA  +   + EK   P  V + ++I G   
Sbjct: 476 LTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSK 535

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
            G M  AI   +KM R    PD  T +++I   +K    N   +I
Sbjct: 536 SGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKI 580



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 181/402 (45%), Gaps = 23/402 (5%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           +Y  ++  L   G  D+   + D M + G LP++ +    ++   + GK   AK +L++ 
Sbjct: 420 SYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEM 479

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +    F+Y +L++  ++  N DEA  +F+        P    +N++I+G S+ G +
Sbjct: 480 LDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMM 539

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCR---VNEVARGHELLKEVKFKSEFSPDVVT 334
             A      M      PDI T++T+I G  +   +N V +   L+     K    P+VVT
Sbjct: 540 DNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLM----VKQNCKPNVVT 595

Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
           YTS+I+GYC+ G+   A  +++ M S G+KPS VT+++LI  F K   +  A    E ML
Sbjct: 596 YTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELML 655

Query: 395 SFGYLPDVVTFSSLIDGYCRN---------GQLNQGLKLCDE-----MKGKNLSPNVYTF 440
                P+   F  L++G+              L++  +   E     M G   +     +
Sbjct: 656 INKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAY 715

Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE-ANVIVAEME 499
             ++  LC++  +  A +   ++    L      +  +I G C  GN  E  N+I  ++ 
Sbjct: 716 NCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLN 775

Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
           E   +   + +++ +     +G + EA  I   M++   +P+
Sbjct: 776 EGELQI-ALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 4/298 (1%)

Query: 274 IGEVKKAFEFFYDMGSFGCS-PDIVTYNTLISGLCRVNEVARGHELLKEVKFKS---EFS 329
           +G V KA E ++ +     S P     N+L++ L +   +   H+L  E+  +    +  
Sbjct: 146 VGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDIC 205

Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
            D  T + ++ G C  G+++    +       G  P+ V +N LIDG+ K G + SA  +
Sbjct: 206 VDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKL 265

Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
            +++   G++P + TF SL++G+C+ G       L  EMK + LS NV  +  +I+A  K
Sbjct: 266 FKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYK 325

Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
                 A+  LK++  N   P    YN +I+ FC  G V+EA  ++ +   +   P+K+T
Sbjct: 326 LGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLT 385

Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +T L+ G+C +G   +A     +M   G   D I+  +LI  L+  G  + A  I  R
Sbjct: 386 YTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDR 443



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 76/290 (26%)

Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
           L+E+K K E  P     + V+  Y  +G +DKA  +Y+                   G  
Sbjct: 121 LEEMKTK-ETIPTREALSDVLCAYADVGLVDKALEVYH-------------------GVV 160

Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM----KGKNLS 434
           K+ N                LP     +SL++   ++ ++    +L DEM     G ++ 
Sbjct: 161 KLHN---------------SLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDIC 205

Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
            + YT +I++  LC + R+ D  + ++       VP    YN +IDG+CK G V+ A  +
Sbjct: 206 VDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKL 265

Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI--------------------SIFNKML 534
             +++ K   P   TF  L+ G C  G M EAI                    +I +   
Sbjct: 266 FKKLKMKGFIPTLQTFGSLVNGFCKMG-MFEAIDLLLLEMKDRGLSVNVQMYNNIIDARY 324

Query: 535 RIG----------------CAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
           ++G                C PD +T N+LI+     G   EA +++++ 
Sbjct: 325 KLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQT 374


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 200/406 (49%), Gaps = 2/406 (0%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           YN ++   C+ G  D  + +   M  +G  P +      ++   R G   +   L  +  
Sbjct: 434 YNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMA 493

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
              +  + + + +L+N   K    DEA  +F +       P+  TFN++I+G   +G ++
Sbjct: 494 ERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIR 553

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           KAF+ +  M   G  PD  TY +LISGLC  + V++ +E + +++  S    +  + T++
Sbjct: 554 KAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE-NSYAVLNNFSLTAL 612

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           + G+ + G+  +   +++EM   G+K   V+F +++    K  +   +  +   M   G 
Sbjct: 613 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 672

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            PD + ++ +ID   +   + Q L   D+M     SPN  T T+LIN LCK   L  A  
Sbjct: 673 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 732

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
             K++   +++P  F YN  +D F   G++++A  + + M +       V+F ILI G C
Sbjct: 733 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLC 791

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
             G++ EAI + +K+   G +PD I+ +++I  L K G  N+AF +
Sbjct: 792 KAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 837



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 194/408 (47%), Gaps = 3/408 (0%)

Query: 148 VNLSLNHSFKTYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           VN+ +     TY  ++   C M  L  ++++  D +R  G +P+     F +    +   
Sbjct: 283 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRL-GFVPSEANCSFMIDELRKKEL 341

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
            + A  L  +     +  + F YN+L++ L K    D+A  +FKE      +P+  T+ I
Sbjct: 342 VEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 401

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
           LI  L + G ++ A   F  M   G    +  YN+LI+G C+   + R   LL  +  K 
Sbjct: 402 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM-VKE 460

Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
             +P   +Y+ +I+G C+ G +     ++ EM   GI  +  TF  LI+GF K   M  A
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520

Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
             + ++M+    +P+ VTF+ +I+GYC  G + +  +L D+M    L P+ YT+  LI+ 
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580

Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
           LC  + ++ A  F+  L+ +  V   F    ++ GF + G   E   +  EM  +  K D
Sbjct: 581 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 640

Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
            V+FTI++     +    ++  +F +M   G  PDDI    +I  L K
Sbjct: 641 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSK 688



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 192/427 (44%), Gaps = 46/427 (10%)

Query: 178 VFDYMRSDG-HLPNSPMIEFFVSSCIRA----GKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
           +FD M   G HL      E+  ++ IRA       D A+GL+ +     V  S   YN L
Sbjct: 208 LFDKMLQSGVHLD-----EYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVL 262

Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM----- 287
           +  L K     EAV +      +    D  T+  L+ G  R+ E++ A    +DM     
Sbjct: 263 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 322

Query: 288 ------------------------------GSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
                                         G  G  P++  YN LI  LC+         
Sbjct: 323 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 382

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
           L KE+  +    P+ VTY  +I   CK G ++ A  ++++M   GIK +   +N LI+G+
Sbjct: 383 LFKEMAGRG-LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 441

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K G++  A  +   M+  G  P   ++S LI G CRNG L+  ++L  EM  + ++ N 
Sbjct: 442 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 501

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
           YTFT LIN  CK+ ++++A R   ++  ++++P    +N +I+G+C  GN+ +A  +  +
Sbjct: 502 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 561

Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
           M E   KPD  T+  LI G C+   + +A      +       ++ ++ +L+    + G 
Sbjct: 562 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 621

Query: 558 PNEAFRI 564
             E + +
Sbjct: 622 FTETYHL 628



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 172/365 (47%), Gaps = 9/365 (2%)

Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA----VYMFKEYFRLYSQPDTWTFN 265
           A+ L  +     V +  ++Y + + A  +  N D A    V M  E  +  + P    +N
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVP----YN 260

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           +L+ GL +   V++A E    M + G + D VTY TL+ G CR+ E+     +  ++  +
Sbjct: 261 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM-IR 319

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
             F P     + +I    K   +++A  +  ++   G+ P+   +N LID   K      
Sbjct: 320 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDD 379

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A+ + + M   G  P+ VT++ LI   C+ G +   L L D+M+ K +   VY +  LIN
Sbjct: 380 ADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLIN 439

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
             CK+  L+ AR  L  +    L P    Y+P+I G C+ G++     +  EM E+    
Sbjct: 440 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAW 499

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           +  TFT LI G C   +M EA  +F+KM+     P+++T N +I      G   +AF++ 
Sbjct: 500 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 559

Query: 566 QRASE 570
            +  E
Sbjct: 560 DQMVE 564



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 188/402 (46%), Gaps = 13/402 (3%)

Query: 159 YNLVMRSLCE-MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
           YN++M  LC+ M + ++V+V  + M + G   +       V    R  + + A  +    
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVK-NVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 317

Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
               F P E   S FM    ++ L K+   +EA  +  +   L   P+ + +N LI  L 
Sbjct: 318 IRLGFVPSEANCS-FM----IDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLC 372

Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
           +      A   F +M   G  P+ VTY  LI  LC+   +     L  +++ K      V
Sbjct: 373 KNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG-IKVTV 431

Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
             Y S+I+GYCK G +D+A G+ + M   G+ P+A +++ LI G  + G++ S   +   
Sbjct: 432 YPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHRE 491

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M   G   +  TF++LI+G+C++ ++++  +L D+M   N+ PN  TF ++I   C    
Sbjct: 492 MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGN 551

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           +  A +   Q+    L P  + Y  +I G C    V +AN  VA++E      +  + T 
Sbjct: 552 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 611

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
           L+ G   +GR  E   ++++M   G   D ++   ++   LK
Sbjct: 612 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 653



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 168/346 (48%), Gaps = 1/346 (0%)

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           +T++ +  + +L +LVK      A  +F +  +     D + +   I+       +  A 
Sbjct: 182 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 241

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
                M S G     V YN L+ GLC+   V    E+ K V      + D VTY +++ G
Sbjct: 242 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV-KNVMVNIGVTADEVTYRTLVYG 300

Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
           +C++ +++ A  I ++M   G  PS    + +ID   K   +  A  +  ++   G +P+
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
           V  +++LID  C+N + +   +L  EM G+ L PN  T+ ILI+ALCK   + DA     
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
           +++   +    + YN +I+G+CK G++D A  +++ M ++   P   +++ LI G C  G
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480

Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
            +   + +  +M   G A ++ T  +LI+   K    +EA R+  +
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 526



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 158/359 (44%), Gaps = 2/359 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T+N+++   C +G       ++D M   G  P++      +S          A   ++  
Sbjct: 538 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 597

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                 ++ F   +LL    ++    E  +++ E      + D  +F I++    +  + 
Sbjct: 598 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 657

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
           +K+   F +M   G  PD + Y  +I  L +   + +      ++     +SP+ VT+T 
Sbjct: 658 EKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG-YSPNTVTHTV 716

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
           +I+  CK G +  A  +  EM +  + P+  T+N  +D F   G+M  A+ +   ML  G
Sbjct: 717 LINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-G 775

Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
           +L  +V+F+ LI G C+ G++ + + L  ++     SP+  +++ +I+ LCK   +N A 
Sbjct: 776 HLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAF 835

Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
               ++ +  L P    YN  I      G  D+A  I   M     +P+  T+  L+ G
Sbjct: 836 ELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 138/334 (41%), Gaps = 35/334 (10%)

Query: 148 VNLSLNHSFKTYNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
           V + L     TY  ++  LC   G+  + + V D   S   L N  +         R G+
Sbjct: 563 VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGF-FREGR 621

Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
                 L  +     V +    +  ++ A +KQ++ +++  +F+E      +PD   +  
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 681

Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK--- 323
           +I  LS+   + +A   +  M   G SP+ VT+  LI+ LC+   +     L KE+    
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741

Query: 324 ----------FKSEFSPD--------------------VVTYTSVISGYCKLGKMDKATG 353
                     F   F+ +                    +V++  +I G CK GK+ +A  
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAID 801

Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
           + +++   G  P  ++++ +I    K+G++  A  +   ML  G  PDVV ++  I    
Sbjct: 802 LMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCN 861

Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
            +G+ ++ L +   M    + PN  T+  L++ +
Sbjct: 862 VHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%)

Query: 186 GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEA 245
           GHL +       +    +AGK   A  L+S+      +     Y+++++ L K  + ++A
Sbjct: 775 GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 834

Query: 246 VYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
             ++ E      +PD   +NI I+  +  GE  KA   + +M   G  P+  TY  L+SG
Sbjct: 835 FELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894

Query: 306 LCRVNEVARGHELL 319
           +  +  V++G  LL
Sbjct: 895 ISLM--VSKGQALL 906


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 184/365 (50%), Gaps = 3/365 (0%)

Query: 208 DAAKG--LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
           + +KG  LL+Q     V+ + F+Y  L+ A  +  + D+A  MF     L    + + + 
Sbjct: 122 NVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYT 181

Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
           I+I G  + G  K  FE +  M   G  P++ TYN+LI+  CR  +++   ++  E+  K
Sbjct: 182 IMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS-K 240

Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
              + + VTY  +I G C+ G++ KA G+   M    I P+  TFN+L+DG    G +  
Sbjct: 241 RGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDK 300

Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
           A    E++   G  P +VT++ LI G+ + G  +   +L  EM+ + +SP+  T+TIL+N
Sbjct: 301 ALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360

Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
              + + +  A      +K   LVP    Y  +I G C  GN+ EA+ +   M E   +P
Sbjct: 361 TFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420

Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
           + V +  +I G+C +    +A+    +M++ G  P+  +  S I  L K G   EA R++
Sbjct: 421 NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480

Query: 566 QRASE 570
           +  +E
Sbjct: 481 KEMTE 485



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 198/386 (51%), Gaps = 3/386 (0%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           ++ + +++ CE G       +   M + G  PN  +    + +C R G  D AK + S+ 
Sbjct: 109 SFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRM 168

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
               +  + ++Y  ++N   K+    +   ++++   +   P+ +T+N LI    R G++
Sbjct: 169 DDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKL 228

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
             AF+ F ++   G + + VTYN LI GLCR  +V++   LL+ +K ++  +P   T+  
Sbjct: 229 SLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMK-RAHINPTTRTFNM 287

Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN-MVSAEYMRERMLSF 396
           ++ G C  G++DKA     ++   G+ P+ VT+N+LI GF KVGN  V +E +RE M   
Sbjct: 288 LMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVRE-MEDR 346

Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
           G  P  VT++ L++ + R+  + +  ++   MK   L P+ +T+ +LI+ LC +  + +A
Sbjct: 347 GISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEA 406

Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
            +  K +    L P   +YN +I+G+CK  N  +A   + EM +    P+  ++   I  
Sbjct: 407 SKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQI 466

Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDD 542
            C  G+ +EA  +  +M   G  P +
Sbjct: 467 LCKDGKSIEAKRLLKEMTEAGLKPPE 492



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 183/378 (48%), Gaps = 37/378 (9%)

Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
           S+F +N+ L+ L K  N D     F EY    +Q D ++F I I+     G V K FE  
Sbjct: 72  SSFSFNNALDLLAKSGNLDRTWGFFTEYLG-RTQFDVYSFGITIKAFCENGNVSKGFELL 130

Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVAR------------------------------ 314
             M + G SP++  Y  LI   CR  ++ +                              
Sbjct: 131 AQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKK 190

Query: 315 -----GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
                G EL +++K      P++ TY S+I+ YC+ GK+  A  +++E++  G+  +AVT
Sbjct: 191 GYKKDGFELYQKMKLVGVL-PNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249

Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
           +N+LI G  + G +  AE + ERM      P   TF+ L+DG C  GQL++ L   +++K
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309

Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
              L P + T+ ILI+   K    +     +++++   + P    Y  +++ F ++ +++
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIE 369

Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
           +A  +   M+     PD+ T+ +LI G C+KG MVEA  ++  M+ +   P+D+  N++I
Sbjct: 370 KAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMI 429

Query: 550 SCLLKGGMPNEAFRIMQR 567
           +   K     +A + ++ 
Sbjct: 430 NGYCKECNSYKALKFLEE 447



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 179/365 (49%), Gaps = 40/365 (10%)

Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD-MG 288
           ++++NA  +    ++++  FK        P +++FN  +  L++ G + + + FF + +G
Sbjct: 42  DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG 101

Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
                 D+ ++   I   C    V++G ELL +++     SP+V  YT +I   C+ G +
Sbjct: 102 R--TQFDVYSFGITIKAFCENGNVSKGFELLAQMETMG-VSPNVFIYTILIEACCRNGDI 158

Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
           D+A  +++ M+  G+  +   + ++I+GF K G       + ++M   G LP++ T++SL
Sbjct: 159 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL 218

Query: 409 IDGYCRNGQLNQGLKLCDE-----------------------------------MKGKNL 433
           I  YCR+G+L+   K+ DE                                   MK  ++
Sbjct: 219 ITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 278

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P   TF +L++ LC   +L+ A  +L++LK   L P    YN +I GF K GN    + 
Sbjct: 279 NPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSE 338

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL- 552
           +V EME++   P KVT+TIL+        + +A  +F+ M RIG  PD  T   LI  L 
Sbjct: 339 LVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 398

Query: 553 LKGGM 557
           +KG M
Sbjct: 399 IKGNM 403



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           SP   ++ + +    K G +D+  G + E      +    +F + I  F + GN+     
Sbjct: 70  SPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG-RTQFDVYSFGITIKAFCENGNVSKGFE 128

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  +M + G  P+V  ++ LI+  CRNG ++Q   +   M    L+ N Y +TI+IN   
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K+    D     +++K   ++P  + YN +I  +C+ G +  A  +  E+ ++    + V
Sbjct: 189 KKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAV 248

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           T+ ILI G C KG++ +A  +  +M R    P   T N L+  L   G  ++A   +++
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 1/214 (0%)

Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
           +N + +T+N++M  LC  G  D      + ++  G  P        +S   + G      
Sbjct: 278 INPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVS 337

Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
            L+ +     ++ S   Y  L+N  V+ ++ ++A  MF    R+   PD  T+ +LI GL
Sbjct: 338 ELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGL 397

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
              G + +A + +  M      P+ V YNT+I+G C+     +  + L+E+  K+  +P+
Sbjct: 398 CIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEM-VKNGVTPN 456

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
           V +Y S I   CK GK  +A  +  EM   G+KP
Sbjct: 457 VASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 92/178 (51%), Gaps = 1/178 (0%)

Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
           M+  G+ P   +F++ +D   ++G L++      E  G+    +VY+F I I A C+   
Sbjct: 64  MVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT-QFDVYSFGITIKAFCENGN 122

Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
           ++     L Q++   + P  F+Y  +I+  C+ G++D+A V+ + M++     ++  +TI
Sbjct: 123 VSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTI 182

Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           +I G   KG   +   ++ KM  +G  P+  T NSLI+   + G  + AF++    S+
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISK 240


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 235/485 (48%), Gaps = 55/485 (11%)

Query: 125 NSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRS 184
            +++V  R +  +  L+FLE  +V + +  +  TYN ++R  C++   +    + + M S
Sbjct: 282 TTIDVFVRANRLEKALRFLERMQV-VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340

Query: 185 DGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR------PGEVTMSTFMYNSLLNALVK 238
            G LP+       +    +  +    + L+ +        P +VT     YN+L++ L K
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT-----YNTLIHMLTK 395

Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
            ++ADEA++  K+      + D   ++ ++  L + G + +A +   +M    C PD+VT
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMD---CPPDVVT 452

Query: 299 YNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEM 358
           Y  +++G CR+ EV +  +LL +V       P+ V+YT++++G C+ GK  +A  + N  
Sbjct: 453 YTAVVNGFCRLGEVDKAKKLL-QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 511

Query: 359 NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLP------------------ 400
                 P+++T++V++ G  + G +  A  +   M+  G+ P                  
Sbjct: 512 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRT 571

Query: 401 -----------------DVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
                            +VV F+++I G+C+N +L+  L + D+M   N   +V+T+T L
Sbjct: 572 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 631

Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKR 502
           ++ L K+ R+ +A   +K++    + P P  Y  VI  +C+ G VD+   I+ +M   ++
Sbjct: 632 VDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQK 691

Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
           C   +  +  +I   C+ G++ EA ++  K+LR     D  T  +L+   LK G+P  A+
Sbjct: 692 C---RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAY 748

Query: 563 RIMQR 567
           ++  R
Sbjct: 749 KVACR 753



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 229/501 (45%), Gaps = 40/501 (7%)

Query: 104 LRSSY--LSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNL 161
           LRSS+    +   R L   L P     V++  D+ ++ LKF  ++       H    Y  
Sbjct: 153 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYS 212

Query: 162 VMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGE 221
           ++  L +  L    + V   M+  G           + S  RAG+   A  +L+  +   
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272

Query: 222 VTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAF 281
           V  +  + N+ ++  V+ N  ++A+   +    +   P+  T+N +I+G   +  V++A 
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332

Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVIS- 340
           E   DM S GC PD V+Y T++  LC+   +    +L+K++  +    PD VTY ++I  
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392

Query: 341 ---------------------------GY-------CKLGKMDKATGIYNEMNSCGIKPS 366
                                      GY       CK G+M +A  + NEM+     P 
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDC---PPD 449

Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
            VT+  +++GF ++G +  A+ + + M + G+ P+ V++++L++G CR G+  +  ++ +
Sbjct: 450 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 509

Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
             +    SPN  T++++++ L +E +L++A   ++++      P P   N ++   C+ G
Sbjct: 510 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 569

Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
              EA   + E   K C  + V FT +I G C    +  A+S+ + M  I    D  T  
Sbjct: 570 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 629

Query: 547 SLISCLLKGGMPNEAFRIMQR 567
           +L+  L K G   EA  +M++
Sbjct: 630 TLVDTLGKKGRIAEATELMKK 650



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/423 (22%), Positives = 180/423 (42%), Gaps = 41/423 (9%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++ +LC+ G     + + + M      P+       V+   R G+ D AK LL    
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMDCP---PDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 477

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
                 +T  Y +LLN + +   + EA  M       +  P++ T+++++ GL R G++ 
Sbjct: 478 THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLS 537

Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
           +A +   +M   G  P  V  N L+  LCR        + ++E   K   + +VV +T+V
Sbjct: 538 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG-CAINVVNFTTV 596

Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
           I G+C+  ++D A  + ++M          T+  L+D  GK G +  A  + ++ML  G 
Sbjct: 597 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 656

Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
            P  VT+ ++I  YC+ G+++  + + ++M  +     +                     
Sbjct: 657 DPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--------------------- 695

Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
                           YN VI+  C  G ++EA+ ++ ++     + D  T   L+ G+ 
Sbjct: 696 ----------------YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYL 739

Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
            KG  + A  +  +M      PD      L   L+  G  +EA ++M R  E  ++   S
Sbjct: 740 KKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 799

Query: 579 WKK 581
            K+
Sbjct: 800 LKQ 802



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 1/168 (0%)

Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
            FS ++  Y R GQL   LK+   M+   + PN+      I+   + NRL  A RFL+++
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303

Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
           +   +VP    YN +I G+C    V+EA  ++ +M  K C PDKV++  ++   C + R+
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363

Query: 524 VEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
           VE   +  KM +  G  PD +T N+LI  L K    +EA   ++ A E
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE 411



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 83/180 (46%)

Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
            + Y  D + + S+++   +        ++   MK + +      F+ ++ +  +  +L 
Sbjct: 200 QWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLR 259

Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
           DA + L  ++   + P   + N  ID F +A  +++A   +  M+     P+ VT+  +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319

Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
            G+C   R+ EAI +   M   GC PD ++  +++  L K     E   +M++ +++  L
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 202/407 (49%), Gaps = 20/407 (4%)

Query: 144 EFSRVNLSLNHS--FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
           +F+R+ L + H+     +N ++ S  +M  H S   +   +   G  P+   +   ++  
Sbjct: 46  QFNRM-LCMRHTPPIIQFNKILDSFAKMK-HYSTVSLSHRLELKGIQPDLFTLNILINCF 103

Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
              G+      +L++        ST   N+L+  L  +    +A++   +      Q + 
Sbjct: 104 CHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQ 163

Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
             +  LI G+ +IG+ + A +    +      PD+V Y+T+I  LC+   V+  + L  E
Sbjct: 164 VGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSE 223

Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
           +  K   S DVVTY ++I G+C +GK+ +A G+ N M    I P   T+ +L+D   K G
Sbjct: 224 MTVKG-ISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEG 282

Query: 382 NMVSA-----------EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKG 430
            +  A           + MR+R    G   DV+T+SSLIDG C+NG L++ + L ++MK 
Sbjct: 283 KVKEAKRRISYVWDLIDEMRDR----GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 338

Query: 431 KNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDE 490
           + + PN++TFTIL++ L K  RL DA+   + L         + YN +I+G CK G ++E
Sbjct: 339 QGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 398

Query: 491 ANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
           A  ++++ME+  C P+  TF  +II    K    +A  +  +M+  G
Sbjct: 399 ALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 445



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 178/348 (51%), Gaps = 8/348 (2%)

Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
           F  N L+N             +  +  +    P T T N LI+GL   G+VKKA  F   
Sbjct: 94  FTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDK 153

Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
           + + G   + V Y TLI+G+C++ +     +LLK++  +    PDVV Y+++I   CK  
Sbjct: 154 LLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLT-KPDVVMYSTIIDALCKYQ 212

Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
            + +A G+++EM   GI    VT+N LI GF  VG +  A  +   M+     PDV T++
Sbjct: 213 LVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYT 272

Query: 407 SLIDGYCRNGQLNQGLK-------LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
            L+D  C+ G++ +  +       L DEM+ +    +V T++ LI+ LCK   L+ A   
Sbjct: 273 ILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 332

Query: 460 LKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
             ++K   + P  F +  ++DG  K G + +A  +  ++  K    +  T+ ++I GHC 
Sbjct: 333 FNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK 392

Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
           +G + EA+++ +KM   GC P+  T  ++I  L K    ++A +++++
Sbjct: 393 QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 440



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 170/323 (52%), Gaps = 12/323 (3%)

Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
           QPD +T NILI     +G++   F     +   G  P  VT NTLI GLC   +V +   
Sbjct: 90  QPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH 149

Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
              ++     F  + V Y ++I+G CK+G    A  +  +++    KP  V ++ +ID  
Sbjct: 150 FHDKL-LAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDAL 208

Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
            K   +  A  +   M   G   DVVT+++LI G+C  G+L + + L + M  K ++P+V
Sbjct: 209 CKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDV 268

Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPK---------PFMYNPVIDGFCKAGNV 488
           YT+TIL++ALCKE ++ +A+R +  + W DL+ +            Y+ +IDG CK G++
Sbjct: 269 YTYTILVDALCKEGKVKEAKRRISYV-W-DLIDEMRDRGQPADVITYSSLIDGLCKNGHL 326

Query: 489 DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSL 548
           D A  +  +M+++  +P+  TFTIL+ G    GR+ +A  +F  +L  G   +  T N +
Sbjct: 327 DRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 386

Query: 549 ISCLLKGGMPNEAFRIMQRASED 571
           I+   K G+  EA  ++ +  ++
Sbjct: 387 INGHCKQGLLEEALTMLSKMEDN 409



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 113/235 (48%), Gaps = 1/235 (0%)

Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
           +P ++ +  ++  + K+ K      + + +   GI+P   T N+LI+ F  +G +     
Sbjct: 56  TPPIIQFNKILDSFAKM-KHYSTVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFS 114

Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
           +  ++L  GY P  VT ++LI G C  GQ+ + L   D++  +    N   +  LIN +C
Sbjct: 115 VLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVC 174

Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
           K      A + LK++      P   MY+ +ID  CK   V EA  + +EM  K    D V
Sbjct: 175 KIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 234

Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
           T+  LI G C+ G++ EAI + N M+     PD  T   L+  L K G   EA R
Sbjct: 235 TYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKR 289



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 43/318 (13%)

Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
           T N +++ LC  G         D + + G   N       ++   + G   AA  LL + 
Sbjct: 130 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKI 189

Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
                     MY+++++AL K     EA  +F E        D  T+N LI G   +G++
Sbjct: 190 DGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKL 249

Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH-------ELLKEVKFKSEFSP 330
           K+A      M     +PD+ TY  L+  LC+  +V           +L+ E++ + +   
Sbjct: 250 KEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQ-PA 308

Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTF-------------------- 370
           DV+TY+S+I G CK G +D+A  ++N+M   GI+P+  TF                    
Sbjct: 309 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVF 368

Query: 371 ---------------NVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
                          NV+I+G  K G +  A  M  +M   G +P+  TF ++I    + 
Sbjct: 369 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 428

Query: 416 GQLNQGLKLCDEMKGKNL 433
            + ++  KL  +M  + L
Sbjct: 429 DENDKAEKLLRQMIARGL 446



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 8/248 (3%)

Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
           Y+ ++ +LC+  L      +F  M   G   +       +      GK   A GLL+   
Sbjct: 201 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMV 260

Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEA------VYMFKEYFRLYSQP-DTWTFNILIQGL 271
              +    + Y  L++AL K+    EA      V+   +  R   QP D  T++ LI GL
Sbjct: 261 LKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGL 320

Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
            + G + +A   F  M   G  P++ T+  L+ GL +   +    E+ +++  K  +  +
Sbjct: 321 CKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKG-YHLN 379

Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
           V TY  +I+G+CK G +++A  + ++M   G  P+A TF  +I    K      AE +  
Sbjct: 380 VYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLR 439

Query: 392 RMLSFGYL 399
           +M++ G L
Sbjct: 440 QMIARGLL 447



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 66/134 (49%), Gaps = 1/134 (0%)

Query: 434 SPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANV 493
           +P +  F  ++++  K    +       +L+   + P  F  N +I+ FC  G +     
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTVS-LSHRLELKGIQPDLFTLNILINCFCHMGQITFGFS 114

Query: 494 IVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLL 553
           ++A++ ++   P  VT   LI G C+KG++ +A+   +K+L  G   + +   +LI+ + 
Sbjct: 115 VLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVC 174

Query: 554 KGGMPNEAFRIMQR 567
           K G    A +++++
Sbjct: 175 KIGDTRAAIKLLKK 188


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.137    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,109,034,534
Number of Sequences: 23463169
Number of extensions: 370789029
Number of successful extensions: 999147
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9107
Number of HSP's successfully gapped in prelim test: 3606
Number of HSP's that attempted gapping in prelim test: 737703
Number of HSP's gapped (non-prelim): 79324
length of query: 595
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 447
effective length of database: 8,886,646,355
effective search space: 3972330920685
effective search space used: 3972330920685
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)