Query 007641
Match_columns 595
No_of_seqs 444 out of 3232
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 06:52:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f4k_A Putative methyltransfer 99.6 5.3E-15 1.8E-19 145.8 17.5 148 371-524 31-195 (257)
2 4hg2_A Methyltransferase type 99.6 1.4E-15 4.7E-20 153.9 12.8 107 372-492 28-136 (257)
3 1vl5_A Unknown conserved prote 99.6 4.4E-15 1.5E-19 147.4 15.8 135 389-525 37-190 (260)
4 3bus_A REBM, methyltransferase 99.6 9.4E-15 3.2E-19 145.5 17.9 149 370-524 46-215 (273)
5 3dlc_A Putative S-adenosyl-L-m 99.6 7E-15 2.4E-19 140.3 16.1 144 391-538 45-214 (219)
6 3kkz_A Uncharacterized protein 99.6 9.6E-15 3.3E-19 145.7 17.6 147 372-524 32-195 (267)
7 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.8E-15 6.1E-20 148.7 11.3 171 346-524 54-237 (254)
8 3dh0_A SAM dependent methyltra 99.6 1.3E-14 4.5E-19 139.6 17.0 149 389-540 37-195 (219)
9 2o57_A Putative sarcosine dime 99.6 1.3E-14 4.3E-19 146.8 17.2 152 371-524 64-233 (297)
10 3h2b_A SAM-dependent methyltra 99.6 3E-14 1E-18 135.8 18.2 131 390-527 42-184 (203)
11 3ujc_A Phosphoethanolamine N-m 99.6 8.2E-15 2.8E-19 144.5 14.5 131 388-525 54-206 (266)
12 3vc1_A Geranyl diphosphate 2-C 99.6 1.4E-14 4.9E-19 148.4 16.6 135 388-525 116-269 (312)
13 2p7i_A Hypothetical protein; p 99.6 4.2E-15 1.5E-19 144.3 11.8 127 389-523 42-197 (250)
14 3hnr_A Probable methyltransfer 99.6 1.9E-14 6.6E-19 138.6 16.2 142 389-540 45-214 (220)
15 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.8E-14 6E-19 145.8 16.7 101 388-492 69-179 (261)
16 3l8d_A Methyltransferase; stru 99.6 8.6E-15 2.9E-19 142.8 13.8 140 372-523 42-198 (242)
17 1nkv_A Hypothetical protein YJ 99.6 1.7E-14 5.8E-19 142.1 15.5 145 370-522 21-184 (256)
18 2ex4_A Adrenal gland protein A 99.6 4.9E-15 1.7E-19 145.6 10.9 149 375-525 65-225 (241)
19 3e23_A Uncharacterized protein 99.6 1.4E-14 4.7E-19 139.2 13.2 128 389-525 43-182 (211)
20 3dtn_A Putative methyltransfer 99.6 2.5E-14 8.6E-19 139.3 15.2 146 374-527 32-216 (234)
21 1xxl_A YCGJ protein; structura 99.6 7.2E-14 2.5E-18 137.5 18.2 136 388-525 20-174 (239)
22 1ve3_A Hypothetical protein PH 99.6 5.7E-14 2E-18 135.4 16.3 103 389-492 38-143 (227)
23 3jwg_A HEN1, methyltransferase 99.6 9E-14 3.1E-18 134.2 17.3 162 372-540 16-212 (219)
24 3g5l_A Putative S-adenosylmeth 99.6 1.9E-14 6.3E-19 142.1 12.6 100 389-492 44-146 (253)
25 3mgg_A Methyltransferase; NYSG 99.5 5E-14 1.7E-18 140.7 15.5 135 388-524 36-197 (276)
26 3dli_A Methyltransferase; PSI- 99.5 2.6E-14 8.9E-19 140.3 13.0 143 368-523 23-182 (240)
27 3ou2_A SAM-dependent methyltra 99.5 1.2E-13 4E-18 132.2 16.2 129 389-525 46-205 (218)
28 3mti_A RRNA methylase; SAM-dep 99.5 1.7E-13 5.8E-18 128.9 16.8 132 389-524 22-168 (185)
29 3sm3_A SAM-dependent methyltra 99.5 9.5E-14 3.3E-18 134.0 15.2 133 389-524 30-206 (235)
30 1y8c_A S-adenosylmethionine-de 99.5 2E-13 6.7E-18 132.8 17.4 117 372-492 22-143 (246)
31 1pjz_A Thiopurine S-methyltran 99.5 8.2E-15 2.8E-19 141.7 7.2 133 389-524 22-175 (203)
32 3pfg_A N-methyltransferase; N, 99.5 1.1E-13 3.9E-18 137.4 15.5 145 389-540 50-251 (263)
33 3cgg_A SAM-dependent methyltra 99.5 4.1E-13 1.4E-17 125.4 18.4 124 389-524 46-174 (195)
34 4htf_A S-adenosylmethionine-de 99.5 5.4E-14 1.9E-18 141.5 13.0 135 389-525 68-232 (285)
35 3i9f_A Putative type 11 methyl 99.5 9.2E-14 3.1E-18 128.7 13.3 138 389-539 17-161 (170)
36 3e8s_A Putative SAM dependent 99.5 8.9E-14 3E-18 133.3 13.4 128 389-524 52-208 (227)
37 2yqz_A Hypothetical protein TT 99.5 1.2E-13 4E-18 136.2 14.6 133 388-522 38-193 (263)
38 3ocj_A Putative exported prote 99.5 1.1E-13 3.7E-18 141.4 14.6 146 389-538 118-304 (305)
39 3gu3_A Methyltransferase; alph 99.5 1.5E-13 5.2E-18 139.0 15.3 116 372-493 8-128 (284)
40 4e2x_A TCAB9; kijanose, tetron 99.5 2.3E-14 7.9E-19 152.6 9.4 154 371-535 93-263 (416)
41 2zfu_A Nucleomethylin, cerebra 99.5 2E-13 6.8E-18 131.4 14.4 126 389-539 67-192 (215)
42 4fsd_A Arsenic methyltransfera 99.5 1.1E-13 3.8E-18 146.6 13.8 134 389-523 83-249 (383)
43 1kpg_A CFA synthase;, cyclopro 99.5 1.3E-13 4.4E-18 138.8 13.0 143 372-524 51-227 (287)
44 2kw5_A SLR1183 protein; struct 99.5 1.1E-13 3.8E-18 131.7 11.9 128 392-524 32-170 (202)
45 3bxo_A N,N-dimethyltransferase 99.5 2.7E-13 9.1E-18 131.7 14.7 97 389-491 40-141 (239)
46 3g2m_A PCZA361.24; SAM-depende 99.5 1.1E-13 3.7E-18 140.7 12.4 100 390-492 83-191 (299)
47 2aot_A HMT, histamine N-methyl 99.5 9.6E-14 3.3E-18 141.0 11.7 134 388-522 51-218 (292)
48 3ege_A Putative methyltransfer 99.5 2E-13 7E-18 136.2 13.9 140 372-524 21-177 (261)
49 2p35_A Trans-aconitate 2-methy 99.5 2.6E-13 8.9E-18 133.6 14.2 99 388-493 32-134 (259)
50 3jwh_A HEN1; methyltransferase 99.5 1.7E-13 5.8E-18 132.3 12.6 143 373-522 17-189 (217)
51 3d2l_A SAM-dependent methyltra 99.5 8.6E-13 2.9E-17 128.5 17.5 112 372-491 22-137 (243)
52 3lcc_A Putative methyl chlorid 99.5 1.3E-13 4.6E-18 134.6 11.8 133 390-525 67-207 (235)
53 2a14_A Indolethylamine N-methy 99.5 1.2E-13 4E-18 138.6 11.2 134 389-524 55-237 (263)
54 3hem_A Cyclopropane-fatty-acyl 99.5 5.3E-13 1.8E-17 135.8 16.2 145 371-525 58-243 (302)
55 1vlm_A SAM-dependent methyltra 99.5 3.4E-13 1.2E-17 130.7 14.1 125 390-524 48-187 (219)
56 3bkw_A MLL3908 protein, S-aden 99.5 4E-13 1.4E-17 130.8 14.4 107 376-492 34-145 (243)
57 2gb4_A Thiopurine S-methyltran 99.5 7E-14 2.4E-18 140.7 8.8 134 389-523 68-225 (252)
58 2xvm_A Tellurite resistance pr 99.5 3.6E-13 1.2E-17 127.0 12.8 131 389-525 32-173 (199)
59 3ccf_A Cyclopropane-fatty-acyl 99.5 7.6E-13 2.6E-17 132.9 15.9 128 389-524 57-209 (279)
60 4df3_A Fibrillarin-like rRNA/T 99.4 2.3E-13 7.9E-18 136.2 11.2 154 366-525 55-217 (233)
61 3grz_A L11 mtase, ribosomal pr 99.4 8.2E-13 2.8E-17 126.4 14.5 135 389-540 60-198 (205)
62 2gs9_A Hypothetical protein TT 99.4 2.8E-13 9.7E-18 129.8 11.2 98 389-493 36-134 (211)
63 3orh_A Guanidinoacetate N-meth 99.4 1.2E-13 4E-18 137.0 8.3 146 370-521 46-206 (236)
64 3g5t_A Trans-aconitate 3-methy 99.4 4E-13 1.4E-17 136.5 12.4 112 372-490 24-148 (299)
65 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.6E-12 5.6E-17 125.7 16.2 127 389-525 41-182 (214)
66 1zx0_A Guanidinoacetate N-meth 99.4 1.5E-13 5E-18 135.1 8.7 144 370-519 46-204 (236)
67 3ofk_A Nodulation protein S; N 99.4 1.8E-13 6.3E-18 131.5 9.1 100 388-492 50-155 (216)
68 2pxx_A Uncharacterized protein 99.4 4.9E-13 1.7E-17 127.3 11.7 117 368-492 27-160 (215)
69 3thr_A Glycine N-methyltransfe 99.4 1.7E-13 5.9E-18 138.0 8.8 117 371-492 43-176 (293)
70 3g07_A 7SK snRNA methylphospha 99.4 3.7E-13 1.3E-17 137.3 11.1 135 389-524 46-268 (292)
71 2vdw_A Vaccinia virus capping 99.4 3.4E-13 1.2E-17 139.2 10.8 135 389-525 48-246 (302)
72 1ri5_A MRNA capping enzyme; me 99.4 3.2E-13 1.1E-17 135.4 10.1 103 389-493 64-176 (298)
73 3cc8_A Putative methyltransfer 99.4 4.7E-13 1.6E-17 128.5 10.5 128 389-525 32-185 (230)
74 3evz_A Methyltransferase; NYSG 99.4 9.5E-12 3.3E-16 120.8 19.9 144 389-540 55-222 (230)
75 2p8j_A S-adenosylmethionine-de 99.4 5.7E-13 2E-17 127.0 10.9 101 389-492 23-129 (209)
76 2fk8_A Methoxy mycolic acid sy 99.4 4.6E-13 1.6E-17 137.0 10.9 143 372-524 77-253 (318)
77 1xdz_A Methyltransferase GIDB; 99.4 4E-12 1.4E-16 125.4 17.0 124 389-524 70-201 (240)
78 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.6E-12 5.5E-17 126.6 13.8 125 389-523 38-177 (213)
79 2avn_A Ubiquinone/menaquinone 99.4 1E-12 3.5E-17 130.9 12.6 99 389-493 54-154 (260)
80 3e05_A Precorrin-6Y C5,15-meth 99.4 1.4E-11 4.7E-16 118.0 20.0 118 388-518 39-161 (204)
81 1nt2_A Fibrillarin-like PRE-rR 99.4 5.9E-12 2E-16 122.9 17.3 128 388-525 56-195 (210)
82 3eey_A Putative rRNA methylase 99.4 3.6E-12 1.2E-16 120.9 15.1 132 389-524 22-172 (197)
83 1dus_A MJ0882; hypothetical pr 99.4 5.6E-12 1.9E-16 117.6 15.8 115 372-493 39-159 (194)
84 3hm2_A Precorrin-6Y C5,15-meth 99.4 6.1E-12 2.1E-16 116.6 15.0 121 388-522 24-150 (178)
85 3bkx_A SAM-dependent methyltra 99.4 4.9E-12 1.7E-16 126.0 15.2 134 388-524 42-218 (275)
86 2i62_A Nicotinamide N-methyltr 99.4 1.4E-12 4.9E-17 128.5 11.1 136 389-525 56-239 (265)
87 3p9n_A Possible methyltransfer 99.4 2.2E-12 7.6E-17 122.2 11.8 123 368-493 24-155 (189)
88 1wzn_A SAM-dependent methyltra 99.4 3.2E-12 1.1E-16 125.7 13.4 102 389-492 41-146 (252)
89 3njr_A Precorrin-6Y methylase; 99.4 1.6E-11 5.3E-16 119.0 17.9 121 388-523 54-178 (204)
90 2b3t_A Protein methyltransfera 99.4 1E-11 3.5E-16 125.2 16.5 150 370-535 95-273 (276)
91 3q87_B N6 adenine specific DNA 99.4 7.1E-12 2.4E-16 117.7 14.3 128 389-536 23-160 (170)
92 3lpm_A Putative methyltransfer 99.4 4.6E-12 1.6E-16 126.6 13.7 125 389-523 49-199 (259)
93 3m33_A Uncharacterized protein 99.4 6.1E-12 2.1E-16 122.8 14.0 116 389-525 48-167 (226)
94 2g72_A Phenylethanolamine N-me 99.3 1.2E-12 4E-17 132.4 8.8 135 389-524 71-255 (289)
95 3dmg_A Probable ribosomal RNA 99.3 1.4E-12 4.6E-17 139.2 9.5 105 389-495 233-344 (381)
96 1fbn_A MJ fibrillarin homologu 99.3 1.3E-11 4.5E-16 121.0 15.8 142 389-537 74-227 (230)
97 3m70_A Tellurite resistance pr 99.3 3.7E-12 1.3E-16 128.2 12.2 99 389-491 120-223 (286)
98 3mq2_A 16S rRNA methyltransfer 99.3 5.2E-12 1.8E-16 121.9 12.6 133 389-523 27-182 (218)
99 4dzr_A Protein-(glutamine-N5) 99.3 7E-13 2.4E-17 126.0 6.1 153 372-537 16-204 (215)
100 2frn_A Hypothetical protein PH 99.3 1.5E-11 5.1E-16 124.9 16.3 141 366-521 108-253 (278)
101 2nxc_A L11 mtase, ribosomal pr 99.3 1.1E-11 3.6E-16 124.3 14.9 123 389-525 120-244 (254)
102 2yxd_A Probable cobalt-precorr 99.3 3.3E-11 1.1E-15 111.5 16.7 131 371-522 21-154 (183)
103 3hp7_A Hemolysin, putative; st 99.3 4.2E-11 1.4E-15 123.5 18.9 130 389-527 85-234 (291)
104 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.5E-11 5.3E-16 120.4 15.0 131 388-524 76-216 (233)
105 2pwy_A TRNA (adenine-N(1)-)-me 99.3 2.4E-11 8.4E-16 119.6 16.1 124 388-525 95-224 (258)
106 3ggd_A SAM-dependent methyltra 99.3 2.5E-12 8.5E-17 126.2 8.8 99 389-492 56-164 (245)
107 3htx_A HEN1; HEN1, small RNA m 99.3 4.9E-11 1.7E-15 136.9 20.4 115 372-493 708-836 (950)
108 3i53_A O-methyltransferase; CO 99.3 4.5E-11 1.5E-15 123.4 18.1 131 389-525 169-321 (332)
109 3g89_A Ribosomal RNA small sub 99.3 2.8E-11 9.7E-16 121.3 16.0 125 389-525 80-212 (249)
110 3mcz_A O-methyltransferase; ad 99.3 3.1E-11 1.1E-15 125.3 16.8 144 389-539 179-350 (352)
111 3dp7_A SAM-dependent methyltra 99.3 1.2E-11 4.2E-16 129.9 13.9 134 389-527 179-344 (363)
112 3p2e_A 16S rRNA methylase; met 99.3 3.9E-12 1.3E-16 125.6 9.3 131 389-523 24-183 (225)
113 3opn_A Putative hemolysin; str 99.3 2.4E-12 8.3E-17 128.1 7.8 128 389-527 37-186 (232)
114 3dxy_A TRNA (guanine-N(7)-)-me 99.3 3.5E-12 1.2E-16 125.3 8.8 102 389-492 34-151 (218)
115 3ckk_A TRNA (guanine-N(7)-)-me 99.3 1.2E-11 4.1E-16 123.0 12.4 123 389-520 46-190 (235)
116 3bgv_A MRNA CAP guanine-N7 met 99.3 1.2E-11 4.1E-16 126.6 12.4 103 389-492 34-156 (313)
117 3gwz_A MMCR; methyltransferase 99.3 6.1E-11 2.1E-15 124.9 18.1 130 389-524 202-355 (369)
118 1x19_A CRTF-related protein; m 99.3 5.3E-11 1.8E-15 124.3 17.5 142 389-538 190-359 (359)
119 2fhp_A Methylase, putative; al 99.3 8.9E-12 3E-16 116.4 10.2 131 356-493 15-156 (187)
120 1l3i_A Precorrin-6Y methyltran 99.3 4.1E-11 1.4E-15 111.5 14.6 118 388-519 32-154 (192)
121 1yb2_A Hypothetical protein TA 99.3 1.5E-11 5.1E-16 124.0 12.3 120 388-523 109-235 (275)
122 2r3s_A Uncharacterized protein 99.3 6.3E-11 2.2E-15 121.6 17.1 132 389-525 165-323 (335)
123 1jsx_A Glucose-inhibited divis 99.3 1.6E-11 5.5E-16 117.1 11.8 117 389-523 65-186 (207)
124 3id6_C Fibrillarin-like rRNA/T 99.3 4.8E-11 1.7E-15 119.2 15.5 145 372-525 60-216 (232)
125 1p91_A Ribosomal RNA large sub 99.3 1.9E-11 6.5E-16 121.7 12.2 92 389-493 85-180 (269)
126 1qzz_A RDMB, aclacinomycin-10- 99.3 1.3E-10 4.4E-15 121.5 18.9 131 389-525 182-339 (374)
127 3q7e_A Protein arginine N-meth 99.3 1.8E-11 6E-16 128.5 12.3 100 389-490 66-172 (349)
128 2fpo_A Methylase YHHF; structu 99.3 5.6E-11 1.9E-15 114.6 14.7 149 370-539 38-193 (202)
129 3lbf_A Protein-L-isoaspartate 99.3 2.7E-11 9.4E-16 116.0 12.2 110 372-493 64-176 (210)
130 3mb5_A SAM-dependent methyltra 99.3 7.1E-11 2.4E-15 116.6 15.5 122 388-525 92-222 (255)
131 2ift_A Putative methylase HI07 99.3 1E-11 3.5E-16 119.7 9.2 133 389-540 53-196 (201)
132 2fyt_A Protein arginine N-meth 99.2 3.6E-11 1.2E-15 125.8 13.6 110 373-488 52-168 (340)
133 1tw3_A COMT, carminomycin 4-O- 99.2 2.1E-10 7.3E-15 119.3 19.4 131 389-525 183-339 (360)
134 3fpf_A Mtnas, putative unchara 99.2 4E-11 1.4E-15 124.0 12.7 99 388-493 121-224 (298)
135 3iv6_A Putative Zn-dependent a 99.2 1.6E-11 5.5E-16 124.7 9.6 107 373-492 33-149 (261)
136 3uwp_A Histone-lysine N-methyl 99.2 1.4E-11 4.8E-16 132.5 9.5 121 366-492 154-289 (438)
137 1i9g_A Hypothetical protein RV 99.2 1.2E-10 4.3E-15 116.5 15.9 124 388-525 98-230 (280)
138 4dcm_A Ribosomal RNA large sub 99.2 1.3E-11 4.6E-16 131.1 9.0 113 374-493 211-336 (375)
139 1ws6_A Methyltransferase; stru 99.2 1.2E-11 4.2E-16 113.6 7.3 122 366-493 20-149 (171)
140 2ip2_A Probable phenazine-spec 99.2 5.1E-10 1.7E-14 115.3 20.2 130 391-525 169-322 (334)
141 1g8a_A Fibrillarin-like PRE-rR 99.2 3.2E-10 1.1E-14 110.2 17.1 145 372-525 57-212 (227)
142 3lst_A CALO1 methyltransferase 99.2 1E-10 3.5E-15 122.0 14.4 127 389-524 184-335 (348)
143 3r0q_C Probable protein argini 99.2 6.9E-11 2.4E-15 125.3 13.2 110 373-491 51-169 (376)
144 2pjd_A Ribosomal RNA small sub 99.2 8.8E-12 3E-16 130.2 5.7 113 373-493 184-305 (343)
145 2ozv_A Hypothetical protein AT 99.2 9.1E-11 3.1E-15 117.9 12.5 124 389-522 36-191 (260)
146 2esr_A Methyltransferase; stru 99.2 1.9E-11 6.5E-16 114.0 6.6 102 389-493 31-140 (177)
147 3tma_A Methyltransferase; thum 99.2 1.7E-10 5.8E-15 120.7 14.4 124 389-525 203-339 (354)
148 3reo_A (ISO)eugenol O-methyltr 99.2 1.5E-10 5E-15 122.1 13.8 127 389-527 203-357 (368)
149 1ej0_A FTSJ; methyltransferase 99.2 5.3E-11 1.8E-15 108.6 8.9 93 388-492 21-137 (180)
150 1o54_A SAM-dependent O-methylt 99.2 2.9E-10 9.8E-15 114.4 14.9 123 388-526 111-240 (277)
151 3bwc_A Spermidine synthase; SA 99.2 2.4E-10 8.2E-15 117.7 14.5 131 389-524 95-239 (304)
152 3tm4_A TRNA (guanine N2-)-meth 99.2 2.3E-10 7.8E-15 121.2 14.4 138 389-540 217-367 (373)
153 3tfw_A Putative O-methyltransf 99.2 5.9E-10 2E-14 110.9 16.5 99 389-492 63-171 (248)
154 1vbf_A 231AA long hypothetical 99.2 1.1E-10 3.7E-15 113.4 10.9 109 372-493 57-167 (231)
155 1g6q_1 HnRNP arginine N-methyl 99.1 2E-10 6.7E-15 119.4 12.7 112 372-489 25-143 (328)
156 1dl5_A Protein-L-isoaspartate 99.1 2.1E-10 7E-15 118.4 12.7 110 372-493 62-177 (317)
157 3bzb_A Uncharacterized protein 99.1 4.8E-10 1.6E-14 113.8 15.1 147 369-523 63-235 (281)
158 2vdv_E TRNA (guanine-N(7)-)-me 99.1 3.2E-10 1.1E-14 112.3 13.5 102 389-491 49-173 (246)
159 3u81_A Catechol O-methyltransf 99.1 3.1E-10 1E-14 110.4 13.1 100 389-491 58-170 (221)
160 1af7_A Chemotaxis receptor met 99.1 1.7E-10 5.9E-15 117.8 11.9 100 390-491 106-252 (274)
161 2yxe_A Protein-L-isoaspartate 99.1 3.8E-10 1.3E-14 108.4 13.2 108 373-493 65-179 (215)
162 2y1w_A Histone-arginine methyl 99.1 2.4E-10 8.3E-15 119.7 12.8 113 372-491 37-155 (348)
163 2qe6_A Uncharacterized protein 99.1 1.7E-10 5.9E-15 117.1 11.3 102 389-493 77-198 (274)
164 2h00_A Methyltransferase 10 do 99.1 4.4E-11 1.5E-15 118.4 6.5 136 389-525 65-238 (254)
165 3dr5_A Putative O-methyltransf 99.1 1.6E-10 5.6E-15 113.6 10.4 158 371-541 42-216 (221)
166 1ixk_A Methyltransferase; open 99.1 3.2E-10 1.1E-14 117.4 13.0 128 388-521 117-271 (315)
167 3adn_A Spermidine synthase; am 99.1 2.4E-10 8.3E-15 117.7 12.0 103 389-492 83-199 (294)
168 3gdh_A Trimethylguanosine synt 99.1 5.9E-12 2E-16 123.4 -0.1 99 389-490 78-180 (241)
169 3ntv_A MW1564 protein; rossman 99.1 1.5E-10 5.3E-15 113.7 9.8 98 389-491 71-176 (232)
170 3p9c_A Caffeic acid O-methyltr 99.1 3.9E-10 1.3E-14 118.8 13.4 126 389-526 201-354 (364)
171 3a27_A TYW2, uncharacterized p 99.1 7E-10 2.4E-14 112.3 14.7 123 388-519 118-245 (272)
172 1o9g_A RRNA methyltransferase; 99.1 1.1E-10 3.7E-15 115.7 8.4 103 389-491 51-214 (250)
173 2plw_A Ribosomal RNA methyltra 99.1 2.6E-10 8.9E-15 108.2 10.5 91 389-491 22-154 (201)
174 2yvl_A TRMI protein, hypotheti 99.1 9E-10 3.1E-14 107.7 14.4 118 389-522 91-212 (248)
175 1u2z_A Histone-lysine N-methyl 99.1 2.9E-10 1E-14 123.2 11.8 114 372-491 229-359 (433)
176 3fzg_A 16S rRNA methylase; met 99.1 7E-11 2.4E-15 115.1 6.1 109 373-491 39-152 (200)
177 4a6d_A Hydroxyindole O-methylt 99.1 2.2E-09 7.4E-14 112.7 17.8 146 389-541 179-349 (353)
178 2ld4_A Anamorsin; methyltransf 99.1 6.1E-10 2.1E-14 104.0 11.3 112 388-517 11-128 (176)
179 1jg1_A PIMT;, protein-L-isoasp 99.1 7.1E-10 2.4E-14 108.8 12.3 108 373-493 79-191 (235)
180 1fp1_D Isoliquiritigenin 2'-O- 99.1 1.1E-09 3.7E-14 115.2 14.5 125 389-525 209-360 (372)
181 1i1n_A Protein-L-isoaspartate 99.1 8.5E-10 2.9E-14 106.9 12.6 99 388-493 76-184 (226)
182 2igt_A SAM dependent methyltra 99.1 1.2E-09 4E-14 114.4 14.3 128 389-520 153-299 (332)
183 3lec_A NADB-rossmann superfami 99.1 1.6E-09 5.4E-14 108.2 14.2 131 374-524 12-148 (230)
184 1xj5_A Spermidine synthase 1; 99.1 6.7E-10 2.3E-14 116.4 12.1 106 389-495 120-239 (334)
185 3c3p_A Methyltransferase; NP_9 99.1 2.8E-10 9.4E-15 109.5 8.4 97 389-491 56-160 (210)
186 3tr6_A O-methyltransferase; ce 99.1 2.8E-10 9.7E-15 110.1 8.5 99 389-492 64-175 (225)
187 2b25_A Hypothetical protein; s 99.0 2.4E-09 8.1E-14 111.0 15.9 99 388-492 104-220 (336)
188 3r3h_A O-methyltransferase, SA 99.0 9.2E-10 3.1E-14 109.6 12.2 99 389-492 60-171 (242)
189 3sso_A Methyltransferase; macr 99.0 1.7E-10 5.8E-15 123.8 7.1 92 389-491 216-324 (419)
190 1r18_A Protein-L-isoaspartate( 99.0 9.3E-10 3.2E-14 107.2 11.8 97 388-492 83-195 (227)
191 3gnl_A Uncharacterized protein 99.0 1.7E-09 6E-14 108.8 14.0 131 374-524 12-148 (244)
192 3kr9_A SAM-dependent methyltra 99.0 2E-09 6.8E-14 107.2 14.2 130 374-524 6-142 (225)
193 2pbf_A Protein-L-isoaspartate 99.0 3.5E-10 1.2E-14 109.7 8.2 97 389-492 80-194 (227)
194 3duw_A OMT, O-methyltransferas 99.0 2.9E-09 9.8E-14 103.0 14.5 99 389-492 58-168 (223)
195 2yxl_A PH0851 protein, 450AA l 99.0 2.3E-09 7.8E-14 116.3 15.0 128 388-521 258-415 (450)
196 2bm8_A Cephalosporin hydroxyla 99.0 3.5E-10 1.2E-14 112.2 7.8 117 390-519 82-213 (236)
197 2nyu_A Putative ribosomal RNA 99.0 9.7E-10 3.3E-14 103.7 9.5 93 389-492 22-146 (196)
198 1wy7_A Hypothetical protein PH 99.0 9.4E-09 3.2E-13 98.0 16.5 121 389-523 49-173 (207)
199 1fp2_A Isoflavone O-methyltran 99.0 2.3E-09 8E-14 111.7 13.3 124 389-524 188-340 (352)
200 2gpy_A O-methyltransferase; st 99.0 7.8E-10 2.7E-14 108.0 9.1 98 389-491 54-160 (233)
201 2qm3_A Predicted methyltransfe 99.0 5.8E-09 2E-13 110.2 16.0 126 389-522 172-306 (373)
202 1sqg_A SUN protein, FMU protei 99.0 2.1E-09 7.1E-14 115.8 12.4 128 388-521 245-400 (429)
203 3b3j_A Histone-arginine methyl 99.0 9.8E-10 3.4E-14 120.5 10.0 99 389-490 158-262 (480)
204 2oxt_A Nucleoside-2'-O-methylt 99.0 2.3E-09 8E-14 108.7 11.6 101 388-491 73-185 (265)
205 2o07_A Spermidine synthase; st 99.0 1.3E-09 4.6E-14 112.5 9.9 103 389-492 95-210 (304)
206 1nv8_A HEMK protein; class I a 99.0 2.9E-09 9.9E-14 108.7 12.1 115 371-492 109-250 (284)
207 1ne2_A Hypothetical protein TA 99.0 2.9E-09 9.9E-14 101.4 11.4 111 389-520 51-165 (200)
208 4hc4_A Protein arginine N-meth 99.0 2.5E-09 8.5E-14 114.0 11.9 112 371-489 69-187 (376)
209 2hnk_A SAM-dependent O-methylt 99.0 7.7E-09 2.6E-13 101.6 14.6 98 389-491 60-181 (239)
210 3dou_A Ribosomal RNA large sub 99.0 1.5E-09 5.2E-14 104.3 9.4 93 388-491 24-139 (191)
211 3ajd_A Putative methyltransfer 99.0 2.4E-09 8.2E-14 108.3 11.1 127 388-520 82-236 (274)
212 2wa2_A Non-structural protein 98.9 2.4E-09 8.1E-14 109.4 11.0 96 388-491 81-193 (276)
213 4azs_A Methyltransferase WBDD; 98.9 2.3E-10 7.8E-15 127.7 3.3 117 389-508 66-194 (569)
214 3gjy_A Spermidine synthase; AP 98.9 6.6E-10 2.3E-14 115.9 6.5 101 391-492 91-201 (317)
215 1sui_A Caffeoyl-COA O-methyltr 98.9 1.6E-09 5.6E-14 108.1 9.0 98 389-491 79-190 (247)
216 2p41_A Type II methyltransfera 98.9 1.1E-09 3.7E-14 113.4 7.3 100 388-492 81-192 (305)
217 2b2c_A Spermidine synthase; be 98.9 1.2E-09 4.1E-14 113.5 7.5 104 389-493 108-224 (314)
218 2b78_A Hypothetical protein SM 98.9 1.4E-08 4.7E-13 108.1 15.7 126 389-518 212-355 (385)
219 1inl_A Spermidine synthase; be 98.9 2.9E-09 9.9E-14 109.4 9.9 103 389-492 90-206 (296)
220 1iy9_A Spermidine synthase; ro 98.9 9.6E-09 3.3E-13 104.4 13.6 127 389-521 75-214 (275)
221 3cbg_A O-methyltransferase; cy 98.9 2.6E-09 8.9E-14 105.1 9.1 99 389-492 72-183 (232)
222 2i7c_A Spermidine synthase; tr 98.9 1.8E-09 6.1E-14 110.1 8.0 104 389-493 78-194 (283)
223 3k6r_A Putative transferase PH 98.9 7.8E-09 2.7E-13 105.9 12.7 148 359-521 101-253 (278)
224 1zg3_A Isoflavanone 4'-O-methy 98.9 7.5E-09 2.6E-13 108.1 12.4 124 389-524 193-346 (358)
225 1uir_A Polyamine aminopropyltr 98.9 6.8E-09 2.3E-13 107.4 11.8 123 389-515 77-216 (314)
226 2avd_A Catechol-O-methyltransf 98.9 3.7E-09 1.3E-13 102.5 9.0 99 389-492 69-180 (229)
227 4dmg_A Putative uncharacterize 98.9 2.4E-08 8.2E-13 106.8 16.2 125 389-518 214-350 (393)
228 2yx1_A Hypothetical protein MJ 98.9 1.6E-08 5.6E-13 105.5 13.8 93 389-491 195-291 (336)
229 3m6w_A RRNA methylase; rRNA me 98.8 5.8E-09 2E-13 114.0 10.3 128 388-521 100-255 (464)
230 2pt6_A Spermidine synthase; tr 98.8 2.7E-09 9.2E-14 111.0 7.3 122 389-515 116-250 (321)
231 3c3y_A Pfomt, O-methyltransfer 98.8 5.7E-09 1.9E-13 103.2 8.7 98 389-491 70-181 (237)
232 3giw_A Protein of unknown func 98.8 3.5E-09 1.2E-13 108.4 7.2 102 389-491 78-200 (277)
233 3c0k_A UPF0064 protein YCCW; P 98.8 2.5E-08 8.6E-13 106.0 13.9 127 389-519 220-364 (396)
234 1wxx_A TT1595, hypothetical pr 98.8 1.1E-08 3.8E-13 108.3 10.6 126 389-518 209-349 (382)
235 3m4x_A NOL1/NOP2/SUN family pr 98.8 8.2E-09 2.8E-13 112.6 9.6 129 388-522 104-260 (456)
236 1zq9_A Probable dimethyladenos 98.8 7.4E-09 2.5E-13 105.7 8.6 109 372-488 15-144 (285)
237 2frx_A Hypothetical protein YE 98.8 2.2E-08 7.4E-13 109.8 12.9 106 389-495 117-250 (479)
238 3v97_A Ribosomal RNA large sub 98.8 2E-08 6.9E-13 114.9 13.0 121 389-519 539-676 (703)
239 1mjf_A Spermidine synthase; sp 98.8 5.6E-09 1.9E-13 106.2 7.5 101 389-492 75-194 (281)
240 2f8l_A Hypothetical protein LM 98.8 3.1E-08 1.1E-12 103.2 13.2 125 389-519 130-280 (344)
241 2ih2_A Modification methylase 98.8 2.6E-08 8.9E-13 105.5 12.6 129 372-518 26-187 (421)
242 1uwv_A 23S rRNA (uracil-5-)-me 98.8 8.1E-08 2.8E-12 103.6 16.6 131 373-522 274-411 (433)
243 2as0_A Hypothetical protein PH 98.8 2.1E-08 7.1E-13 106.6 11.7 125 389-518 217-359 (396)
244 3lcv_B Sisomicin-gentamicin re 98.8 4E-08 1.4E-12 100.0 12.7 129 389-522 132-269 (281)
245 2cmg_A Spermidine synthase; tr 98.7 1.5E-08 5.1E-13 102.6 8.7 94 389-491 72-171 (262)
246 2h1r_A Dimethyladenosine trans 98.7 4.5E-08 1.5E-12 100.6 10.3 83 372-461 29-114 (299)
247 2okc_A Type I restriction enzy 98.7 5.6E-08 1.9E-12 105.1 11.3 140 373-523 159-337 (445)
248 2xyq_A Putative 2'-O-methyl tr 98.7 5E-08 1.7E-12 100.5 10.3 113 388-523 62-195 (290)
249 3frh_A 16S rRNA methylase; met 98.7 5.8E-08 2E-12 97.7 9.9 98 388-490 104-205 (253)
250 2jjq_A Uncharacterized RNA met 98.6 1.7E-07 5.7E-12 101.3 13.1 97 389-492 290-388 (425)
251 1yub_A Ermam, rRNA methyltrans 98.6 2E-09 7E-14 106.8 -2.1 113 373-492 17-146 (245)
252 1qam_A ERMC' methyltransferase 98.5 2.3E-07 7.8E-12 92.4 8.3 83 372-461 17-102 (244)
253 3gru_A Dimethyladenosine trans 98.5 6.3E-07 2.1E-11 92.4 11.6 84 372-461 37-122 (295)
254 2qfm_A Spermine synthase; sper 98.4 1.3E-07 4.5E-12 100.2 5.2 104 389-492 188-315 (364)
255 2ar0_A M.ecoki, type I restric 98.4 3.5E-07 1.2E-11 101.6 8.8 116 373-493 157-314 (541)
256 3ldu_A Putative methylase; str 98.4 4.9E-07 1.7E-11 96.4 9.4 102 389-492 195-345 (385)
257 3bt7_A TRNA (uracil-5-)-methyl 98.4 4.9E-07 1.7E-11 95.3 9.0 94 390-491 214-326 (369)
258 3k0b_A Predicted N6-adenine-sp 98.4 1.1E-06 3.7E-11 94.0 11.1 102 389-492 201-351 (393)
259 3ldg_A Putative uncharacterize 98.4 1.8E-06 6.2E-11 92.1 12.6 102 389-492 194-344 (384)
260 3fut_A Dimethyladenosine trans 98.3 2.5E-06 8.7E-11 86.9 11.1 90 372-472 34-126 (271)
261 3tqs_A Ribosomal RNA small sub 98.3 2.1E-06 7.1E-11 86.6 9.7 83 372-461 16-104 (255)
262 3evf_A RNA-directed RNA polyme 98.3 2.6E-06 9E-11 86.9 10.4 100 388-491 73-184 (277)
263 2b9e_A NOL1/NOP2/SUN domain fa 98.2 7.5E-06 2.6E-10 84.8 13.0 105 388-494 101-237 (309)
264 2dul_A N(2),N(2)-dimethylguano 98.2 1.8E-06 6.2E-11 91.8 7.7 99 389-492 47-165 (378)
265 3v97_A Ribosomal RNA large sub 98.2 1.7E-05 6E-10 90.7 15.8 132 389-536 190-377 (703)
266 3lkd_A Type I restriction-modi 98.2 4.3E-06 1.5E-10 93.0 10.5 141 373-517 205-381 (542)
267 3khk_A Type I restriction-modi 98.2 5E-06 1.7E-10 92.5 11.0 138 372-517 232-419 (544)
268 4gqb_A Protein arginine N-meth 98.1 4.5E-06 1.6E-10 94.3 9.5 99 389-488 357-464 (637)
269 3axs_A Probable N(2),N(2)-dime 98.1 3E-06 1E-10 90.7 7.4 98 389-492 52-159 (392)
270 3o4f_A Spermidine synthase; am 98.1 1.8E-05 6.2E-10 81.6 13.0 129 362-492 57-199 (294)
271 3b5i_A S-adenosyl-L-methionine 98.1 7.2E-06 2.5E-10 87.3 9.8 101 390-491 53-225 (374)
272 3s1s_A Restriction endonucleas 98.1 9E-06 3.1E-10 93.7 11.1 105 389-493 321-467 (878)
273 3ftd_A Dimethyladenosine trans 98.0 1.8E-05 6.2E-10 79.3 9.6 86 372-468 18-107 (249)
274 2qy6_A UPF0209 protein YFCK; s 98.0 2.4E-05 8.2E-10 79.0 10.5 122 388-522 59-232 (257)
275 2r6z_A UPF0341 protein in RSP 98.0 1.6E-06 5.4E-11 87.6 1.3 72 389-461 83-169 (258)
276 3uzu_A Ribosomal RNA small sub 97.9 1.7E-05 6E-10 80.9 8.7 72 372-451 29-106 (279)
277 3ua3_A Protein arginine N-meth 97.9 1.3E-05 4.4E-10 91.1 8.0 99 390-488 410-531 (745)
278 1qyr_A KSGA, high level kasuga 97.9 8.5E-06 2.9E-10 81.9 5.9 83 372-461 8-98 (252)
279 4auk_A Ribosomal RNA large sub 97.9 0.00028 9.6E-09 74.9 16.5 141 388-540 210-357 (375)
280 2efj_A 3,7-dimethylxanthine me 97.8 3.2E-05 1.1E-09 82.5 8.4 102 390-492 53-226 (384)
281 3gcz_A Polyprotein; flavivirus 97.8 1.2E-05 4.3E-10 82.1 4.2 99 389-491 90-201 (282)
282 3ll7_A Putative methyltransfer 97.7 3E-05 1E-09 83.4 5.3 106 390-495 94-213 (410)
283 2oyr_A UPF0341 protein YHIQ; a 97.6 3.4E-05 1.2E-09 78.0 4.9 93 391-485 90-194 (258)
284 3cvo_A Methyltransferase-like 97.6 0.00037 1.3E-08 68.1 11.8 92 390-490 31-153 (202)
285 3eld_A Methyltransferase; flav 97.6 9.6E-05 3.3E-09 76.1 7.8 99 389-491 81-191 (300)
286 2wk1_A NOVP; transferase, O-me 97.6 0.00054 1.8E-08 70.2 13.2 136 389-538 106-281 (282)
287 1m6e_X S-adenosyl-L-methionnin 97.6 3.3E-05 1.1E-09 81.8 4.3 102 389-491 51-209 (359)
288 1m6y_A S-adenosyl-methyltransf 97.6 3.2E-05 1.1E-09 79.9 4.0 72 389-461 26-106 (301)
289 3ufb_A Type I restriction-modi 97.6 0.00028 9.6E-09 78.2 11.7 118 372-493 204-364 (530)
290 4fzv_A Putative methyltransfer 97.4 0.00085 2.9E-08 71.0 12.6 108 388-496 147-289 (359)
291 2k4m_A TR8_protein, UPF0146 pr 97.3 0.00066 2.3E-08 63.3 9.2 79 390-490 36-120 (153)
292 3c6k_A Spermine synthase; sper 97.3 0.0014 4.7E-08 69.8 11.8 146 362-515 181-350 (381)
293 2px2_A Genome polyprotein [con 97.3 0.0014 4.8E-08 66.3 11.2 115 366-491 54-183 (269)
294 3lkz_A Non-structural protein 96.8 0.03 1E-06 57.7 16.4 119 389-518 94-226 (321)
295 3p8z_A Mtase, non-structural p 96.8 0.0091 3.1E-07 59.8 11.5 115 366-491 59-186 (267)
296 2zig_A TTHA0409, putative modi 96.1 0.012 4.2E-07 59.8 8.1 44 389-432 235-280 (297)
297 2zig_A TTHA0409, putative modi 95.7 0.021 7.3E-07 58.0 7.9 92 438-539 23-140 (297)
298 2vz8_A Fatty acid synthase; tr 95.7 0.0048 1.6E-07 79.6 3.7 98 389-491 1240-1348(2512)
299 3vyw_A MNMC2; tRNA wobble urid 95.6 0.087 3E-06 54.5 12.4 72 439-524 170-247 (308)
300 1wg8_A Predicted S-adenosylmet 95.2 0.014 4.9E-07 59.7 4.7 69 388-460 21-96 (285)
301 1boo_A Protein (N-4 cytosine-s 95.2 0.051 1.7E-06 56.1 8.8 73 449-521 29-116 (323)
302 3r24_A NSP16, 2'-O-methyl tran 93.8 0.16 5.6E-06 52.4 8.6 91 389-492 109-218 (344)
303 3pvc_A TRNA 5-methylaminomethy 93.0 0.27 9.2E-06 55.5 9.8 59 451-523 169-231 (689)
304 1g60_A Adenine-specific methyl 92.9 0.26 9E-06 48.9 8.5 63 450-521 20-95 (260)
305 1f8f_A Benzyl alcohol dehydrog 92.9 0.24 8.2E-06 51.3 8.4 92 388-491 189-289 (371)
306 1pl8_A Human sorbitol dehydrog 92.7 0.19 6.6E-06 51.8 7.3 92 388-491 170-273 (356)
307 1kol_A Formaldehyde dehydrogen 92.5 0.22 7.4E-06 52.2 7.5 97 388-491 184-300 (398)
308 1g55_A DNA cytosine methyltran 92.3 0.74 2.5E-05 47.8 11.2 123 391-524 3-148 (343)
309 3ps9_A TRNA 5-methylaminomethy 92.1 0.55 1.9E-05 52.8 10.8 59 451-523 177-239 (676)
310 2dph_A Formaldehyde dismutase; 92.1 0.23 7.8E-06 52.1 7.2 97 388-492 184-300 (398)
311 1g60_A Adenine-specific methyl 92.1 0.21 7.2E-06 49.6 6.5 39 388-426 211-251 (260)
312 3two_A Mannitol dehydrogenase; 92.0 0.12 4.2E-06 53.1 4.8 88 388-492 175-266 (348)
313 3s2e_A Zinc-containing alcohol 91.9 0.17 5.8E-06 51.8 5.6 92 388-491 165-263 (340)
314 1e3j_A NADP(H)-dependent ketos 91.6 0.47 1.6E-05 48.7 8.7 92 388-491 167-271 (352)
315 4ej6_A Putative zinc-binding d 91.5 0.34 1.2E-05 50.4 7.6 93 388-492 181-285 (370)
316 3fpc_A NADP-dependent alcohol 91.3 0.33 1.1E-05 49.9 7.1 92 388-491 165-266 (352)
317 4dvj_A Putative zinc-dependent 89.9 0.87 3E-05 47.2 8.9 89 389-491 171-270 (363)
318 3g7u_A Cytosine-specific methy 89.9 3.7 0.00013 43.2 13.8 121 391-519 3-145 (376)
319 1uuf_A YAHK, zinc-type alcohol 89.8 0.16 5.5E-06 53.0 3.2 89 388-491 193-288 (369)
320 1pqw_A Polyketide synthase; ro 89.3 0.47 1.6E-05 44.3 5.7 92 388-492 37-138 (198)
321 1eg2_A Modification methylase 89.3 0.75 2.6E-05 47.4 7.7 72 449-521 54-136 (319)
322 3uko_A Alcohol dehydrogenase c 89.1 0.64 2.2E-05 48.3 7.2 92 388-491 192-295 (378)
323 3jv7_A ADH-A; dehydrogenase, n 89.1 0.6 2.1E-05 47.7 6.9 92 388-491 170-270 (345)
324 3uog_A Alcohol dehydrogenase; 88.5 0.47 1.6E-05 49.1 5.6 90 388-491 188-287 (363)
325 1v3u_A Leukotriene B4 12- hydr 88.4 0.72 2.4E-05 46.8 6.9 91 388-491 144-244 (333)
326 2h6e_A ADH-4, D-arabinose 1-de 88.1 0.46 1.6E-05 48.7 5.2 90 389-491 170-269 (344)
327 3qv2_A 5-cytosine DNA methyltr 88.1 5.2 0.00018 41.3 13.1 125 390-525 10-160 (327)
328 1p0f_A NADP-dependent alcohol 87.5 0.9 3.1E-05 47.0 7.1 92 388-491 190-293 (373)
329 2c7p_A Modification methylase 87.5 2 7E-05 44.3 9.6 124 390-523 11-151 (327)
330 4dcm_A Ribosomal RNA large sub 87.4 5.7 0.0002 41.5 13.2 95 390-491 39-136 (375)
331 2hcy_A Alcohol dehydrogenase 1 87.4 0.48 1.6E-05 48.6 4.8 93 388-492 168-270 (347)
332 1rjw_A ADH-HT, alcohol dehydro 87.3 1.4 4.6E-05 45.1 8.2 90 388-491 163-261 (339)
333 3m6i_A L-arabinitol 4-dehydrog 87.3 2.1 7.2E-05 43.9 9.7 93 388-492 178-284 (363)
334 1cdo_A Alcohol dehydrogenase; 87.1 0.81 2.8E-05 47.4 6.4 92 388-491 191-294 (374)
335 2jhf_A Alcohol dehydrogenase E 86.9 1 3.6E-05 46.5 7.1 92 388-491 190-293 (374)
336 3gms_A Putative NADPH:quinone 86.8 0.67 2.3E-05 47.3 5.5 91 388-492 143-244 (340)
337 3fbg_A Putative arginate lyase 86.7 1.2 4.1E-05 45.6 7.3 88 389-490 150-247 (346)
338 2fzw_A Alcohol dehydrogenase c 86.6 1 3.6E-05 46.4 6.9 92 388-491 189-292 (373)
339 3goh_A Alcohol dehydrogenase, 86.4 0.51 1.7E-05 47.6 4.3 85 388-491 141-229 (315)
340 1jvb_A NAD(H)-dependent alcoho 86.4 0.71 2.4E-05 47.3 5.4 92 388-491 169-271 (347)
341 4b7c_A Probable oxidoreductase 86.3 0.81 2.8E-05 46.5 5.8 89 388-491 148-248 (336)
342 2j3h_A NADP-dependent oxidored 86.3 1.2 4E-05 45.4 7.0 91 388-491 154-255 (345)
343 1vj0_A Alcohol dehydrogenase, 86.0 0.84 2.9E-05 47.5 5.9 92 388-491 194-298 (380)
344 2d8a_A PH0655, probable L-thre 85.8 1.7 5.9E-05 44.4 8.0 90 389-491 167-267 (348)
345 1e3i_A Alcohol dehydrogenase, 85.8 1 3.5E-05 46.6 6.4 93 388-492 194-298 (376)
346 2eih_A Alcohol dehydrogenase; 85.2 1.1 3.9E-05 45.7 6.3 91 388-491 165-265 (343)
347 3dmg_A Probable ribosomal RNA 85.1 1.3 4.4E-05 46.7 6.7 102 374-492 35-140 (381)
348 4a2c_A Galactitol-1-phosphate 85.0 1.7 5.8E-05 44.1 7.4 92 388-492 159-261 (346)
349 1piw_A Hypothetical zinc-type 85.0 0.25 8.4E-06 51.1 1.1 91 388-491 178-276 (360)
350 2b5w_A Glucose dehydrogenase; 85.0 1.1 3.7E-05 46.1 6.0 90 391-492 174-274 (357)
351 3nx4_A Putative oxidoreductase 84.9 1.6 5.4E-05 44.0 7.1 87 392-491 149-241 (324)
352 3tos_A CALS11; methyltransfera 84.8 5.8 0.0002 39.8 11.0 62 450-518 179-240 (257)
353 1yb5_A Quinone oxidoreductase; 84.0 1.7 5.9E-05 44.7 7.0 91 388-491 169-269 (351)
354 1i4w_A Mitochondrial replicati 83.9 1.1 3.7E-05 47.1 5.4 52 372-423 39-96 (353)
355 3qwb_A Probable quinone oxidor 83.7 1.3 4.3E-05 45.1 5.8 90 388-491 147-247 (334)
356 1rjd_A PPM1P, carboxy methyl t 83.3 3.2 0.00011 43.0 8.7 100 389-490 97-231 (334)
357 4eez_A Alcohol dehydrogenase 1 82.6 3 0.0001 42.3 8.1 92 388-492 162-264 (348)
358 2cf5_A Atccad5, CAD, cinnamyl 82.2 0.44 1.5E-05 49.2 1.6 88 389-491 180-275 (357)
359 3ubt_Y Modification methylase 82.1 12 0.00041 37.6 12.4 126 391-525 1-143 (331)
360 3jyn_A Quinone oxidoreductase; 82.0 1.6 5.5E-05 44.2 5.8 91 388-491 139-239 (325)
361 1xa0_A Putative NADPH dependen 81.1 1.1 3.7E-05 45.4 4.1 87 392-491 152-246 (328)
362 3ip1_A Alcohol dehydrogenase, 80.7 3.8 0.00013 42.9 8.2 93 388-492 212-319 (404)
363 1iz0_A Quinone oxidoreductase; 80.6 0.87 3E-05 45.6 3.1 86 388-491 124-218 (302)
364 4h0n_A DNMT2; SAH binding, tra 79.6 16 0.00055 37.6 12.5 126 391-526 4-150 (333)
365 1tt7_A YHFP; alcohol dehydroge 79.6 1.5 5.3E-05 44.2 4.7 87 392-491 153-247 (330)
366 1qor_A Quinone oxidoreductase; 79.3 2.1 7E-05 43.3 5.5 91 388-491 139-239 (327)
367 4eye_A Probable oxidoreductase 79.2 1.5 5.1E-05 44.8 4.5 91 388-491 158-257 (342)
368 3tqh_A Quinone oxidoreductase; 78.2 3.3 0.00011 41.7 6.7 90 388-491 151-245 (321)
369 2c0c_A Zinc binding alcohol de 78.0 3.9 0.00013 42.1 7.3 92 388-492 162-262 (362)
370 1yqd_A Sinapyl alcohol dehydro 77.6 0.81 2.8E-05 47.4 1.9 88 389-491 187-282 (366)
371 3krt_A Crotonyl COA reductase; 77.4 4.5 0.00015 43.1 7.7 90 388-491 227-344 (456)
372 2dq4_A L-threonine 3-dehydroge 77.0 2.1 7E-05 43.7 4.7 89 389-491 164-262 (343)
373 1wly_A CAAR, 2-haloacrylate re 75.8 3.6 0.00012 41.7 6.1 91 388-491 144-244 (333)
374 2j8z_A Quinone oxidoreductase; 75.2 2.9 0.0001 42.9 5.3 91 388-491 161-261 (354)
375 3gqv_A Enoyl reductase; medium 74.1 4.4 0.00015 41.9 6.4 91 388-491 163-263 (371)
376 4dup_A Quinone oxidoreductase; 73.8 2.3 7.7E-05 43.7 4.0 89 388-491 166-265 (353)
377 2oo3_A Protein involved in cat 73.3 2.1 7.1E-05 43.7 3.5 100 390-492 92-199 (283)
378 4a0s_A Octenoyl-COA reductase/ 73.1 3.2 0.00011 44.0 5.1 90 388-491 219-336 (447)
379 2km1_A Protein DRE2; yeast, an 72.6 2.1 7.3E-05 39.1 3.1 44 446-489 52-96 (136)
380 2uyo_A Hypothetical protein ML 71.8 72 0.0025 32.4 14.7 102 390-492 103-219 (310)
381 1zsy_A Mitochondrial 2-enoyl t 71.6 9.9 0.00034 38.8 8.3 94 388-491 166-270 (357)
382 1eg2_A Modification methylase 71.0 4.6 0.00016 41.5 5.5 32 388-419 241-274 (319)
383 1boo_A Protein (N-4 cytosine-s 70.9 3.6 0.00012 42.1 4.7 35 388-422 251-287 (323)
384 3me5_A Cytosine-specific methy 70.8 53 0.0018 35.7 14.2 139 374-519 70-254 (482)
385 3tka_A Ribosomal RNA small sub 69.4 4.5 0.00015 42.4 5.0 38 388-425 56-98 (347)
386 2zb4_A Prostaglandin reductase 68.9 8.8 0.0003 39.1 7.2 89 389-491 158-260 (357)
387 3gaz_A Alcohol dehydrogenase s 68.9 5.1 0.00017 40.9 5.3 87 388-491 149-246 (343)
388 3fwz_A Inner membrane protein 68.1 21 0.00072 31.2 8.7 91 390-491 7-105 (140)
389 2py6_A Methyltransferase FKBM; 68.1 7.3 0.00025 41.2 6.5 44 388-431 225-274 (409)
390 4dkj_A Cytosine-specific methy 65.5 23 0.00077 37.7 9.7 33 390-422 10-51 (403)
391 2cdc_A Glucose dehydrogenase g 65.3 7.1 0.00024 40.1 5.6 90 390-492 181-279 (366)
392 1zkd_A DUF185; NESG, RPR58, st 57.2 14 0.00049 39.1 6.2 32 390-421 81-123 (387)
393 1gu7_A Enoyl-[acyl-carrier-pro 53.9 21 0.00071 36.3 6.7 95 388-491 165-275 (364)
394 2vhw_A Alanine dehydrogenase; 52.6 6.3 0.00022 41.2 2.6 95 389-491 167-268 (377)
395 1h2b_A Alcohol dehydrogenase; 51.0 14 0.00046 37.9 4.8 90 388-492 185-286 (359)
396 3l9w_A Glutathione-regulated p 50.0 83 0.0028 33.2 10.8 90 390-492 4-103 (413)
397 3ijr_A Oxidoreductase, short c 49.6 51 0.0017 32.5 8.6 103 389-491 46-182 (291)
398 4ft4_B DNA (cytosine-5)-methyl 49.5 2.6E+02 0.0088 31.6 15.5 34 389-422 211-253 (784)
399 3p2y_A Alanine dehydrogenase/p 49.2 11 0.00039 39.8 3.9 96 389-490 183-301 (381)
400 2vn8_A Reticulon-4-interacting 49.1 11 0.00036 38.9 3.6 92 388-492 182-281 (375)
401 3ius_A Uncharacterized conserv 47.2 1.9E+02 0.0066 27.4 15.6 60 391-461 6-71 (286)
402 3swr_A DNA (cytosine-5)-methyl 46.5 1.9E+02 0.0065 34.3 14.0 127 389-523 539-700 (1002)
403 4gua_A Non-structural polyprot 46.4 24 0.00083 39.3 5.9 71 446-522 215-295 (670)
404 3v2g_A 3-oxoacyl-[acyl-carrier 44.9 77 0.0026 30.8 9.0 104 389-492 30-166 (271)
405 4a27_A Synaptic vesicle membra 43.9 11 0.00039 38.3 2.8 88 388-491 141-238 (349)
406 3ce6_A Adenosylhomocysteinase; 43.4 10 0.00035 41.5 2.4 86 389-492 273-362 (494)
407 3trk_A Nonstructural polyprote 43.0 12 0.00042 38.0 2.7 65 452-521 210-284 (324)
408 3is3_A 17BETA-hydroxysteroid d 42.9 1E+02 0.0036 29.6 9.6 104 389-492 17-153 (270)
409 2eez_A Alanine dehydrogenase; 42.7 11 0.00038 39.1 2.6 94 389-490 165-265 (369)
410 1lss_A TRK system potassium up 41.2 1.2E+02 0.0043 25.2 8.8 88 390-490 4-101 (140)
411 3o26_A Salutaridine reductase; 41.1 1.2E+02 0.0041 29.1 9.8 74 389-462 11-100 (311)
412 3c85_A Putative glutathione-re 40.5 79 0.0027 28.5 7.8 93 390-491 39-139 (183)
413 3r3s_A Oxidoreductase; structu 37.0 1.1E+02 0.0039 29.9 8.9 104 389-492 48-186 (294)
414 2zwa_A Leucine carboxyl methyl 36.6 2.6E+02 0.009 31.1 12.8 42 389-430 107-158 (695)
415 3pi7_A NADH oxidoreductase; gr 36.0 87 0.003 31.5 8.0 87 391-491 166-263 (349)
416 3nbm_A PTS system, lactose-spe 34.4 48 0.0016 28.6 4.9 80 390-492 6-85 (108)
417 4f3n_A Uncharacterized ACR, CO 33.9 31 0.0011 37.1 4.3 33 390-422 138-179 (432)
418 3pxx_A Carveol dehydrogenase; 33.6 1.4E+02 0.0049 28.6 8.9 102 389-491 9-153 (287)
419 3u5t_A 3-oxoacyl-[acyl-carrier 33.4 97 0.0033 30.0 7.6 102 390-491 27-161 (267)
420 1l7d_A Nicotinamide nucleotide 33.3 19 0.00065 37.5 2.5 32 389-420 171-206 (384)
421 1pjc_A Protein (L-alanine dehy 33.2 9.8 0.00034 39.4 0.3 95 390-490 167-266 (361)
422 3llv_A Exopolyphosphatase-rela 33.0 1.4E+02 0.0047 25.5 7.8 88 390-491 6-103 (141)
423 3av4_A DNA (cytosine-5)-methyl 32.7 6.2E+02 0.021 31.0 15.7 125 389-522 850-1010(1330)
424 3oig_A Enoyl-[acyl-carrier-pro 32.6 1.9E+02 0.0066 27.3 9.6 103 389-492 6-148 (266)
425 1g0o_A Trihydroxynaphthalene r 31.2 1.4E+02 0.0047 28.9 8.3 103 390-492 29-164 (283)
426 3s8f_C Cytochrome C oxidase po 31.1 21 0.00073 24.9 1.6 20 20-39 7-26 (34)
427 4eso_A Putative oxidoreductase 30.8 97 0.0033 29.7 7.1 99 389-491 7-138 (255)
428 4dio_A NAD(P) transhydrogenase 30.7 27 0.00092 37.2 3.2 96 389-490 189-311 (405)
429 2hwk_A Helicase NSP2; rossman 30.0 32 0.0011 35.3 3.4 40 452-491 205-254 (320)
430 4gmf_A Yersiniabactin biosynth 29.5 2.5E+02 0.0087 29.0 10.4 65 389-460 6-73 (372)
431 1x13_A NAD(P) transhydrogenase 29.2 13 0.00043 39.4 0.3 33 389-421 171-207 (401)
432 2qrv_A DNA (cytosine-5)-methyl 29.0 37 0.0013 34.4 3.7 68 389-461 15-91 (295)
433 1e2b_A Enzyme IIB-cellobiose; 28.9 34 0.0011 29.3 2.9 54 392-461 5-58 (106)
434 3e8x_A Putative NAD-dependent 28.7 3.5E+02 0.012 24.9 12.0 66 389-461 20-92 (236)
435 3ggo_A Prephenate dehydrogenas 28.3 2.2E+02 0.0077 28.4 9.5 88 390-489 33-126 (314)
436 1wma_A Carbonyl reductase [NAD 27.2 1.4E+02 0.0049 27.9 7.5 101 390-491 4-138 (276)
437 2h7i_A Enoyl-[acyl-carrier-pro 26.9 94 0.0032 29.9 6.2 30 390-419 7-43 (269)
438 3edm_A Short chain dehydrogena 26.2 1.4E+02 0.0049 28.4 7.4 102 389-491 7-143 (259)
439 3icc_A Putative 3-oxoacyl-(acy 25.8 1E+02 0.0034 29.0 6.1 102 390-492 7-148 (255)
440 1tvm_A PTS system, galactitol- 25.6 1.3E+02 0.0044 25.7 6.1 56 391-461 22-77 (113)
441 3k6j_A Protein F01G10.3, confi 25.3 2.8E+02 0.0096 29.8 10.0 127 389-523 53-230 (460)
442 2hmt_A YUAA protein; RCK, KTN, 25.2 2.3E+02 0.0079 23.5 7.8 88 390-490 6-103 (144)
443 1zcj_A Peroxisomal bifunctiona 24.8 2.5E+02 0.0087 29.7 9.6 93 390-489 37-148 (463)
444 3oj0_A Glutr, glutamyl-tRNA re 24.6 1.3E+02 0.0043 26.0 6.0 84 390-491 21-110 (144)
445 2pd4_A Enoyl-[acyl-carrier-pro 24.5 1.7E+02 0.0059 28.1 7.6 31 390-420 6-43 (275)
446 3g0o_A 3-hydroxyisobutyrate de 23.8 2.6E+02 0.0088 27.4 8.9 111 390-520 7-124 (303)
447 3ek2_A Enoyl-(acyl-carrier-pro 23.5 2.7E+02 0.0093 26.1 8.8 102 389-492 13-154 (271)
448 1mv8_A GMD, GDP-mannose 6-dehy 23.4 1.7E+02 0.0059 30.6 7.9 29 392-420 2-34 (436)
449 2ew2_A 2-dehydropantoate 2-red 22.0 2.5E+02 0.0087 27.0 8.3 91 391-490 4-107 (316)
450 2f1k_A Prephenate dehydrogenas 21.7 3E+02 0.01 26.3 8.7 83 392-488 2-88 (279)
451 1y1p_A ARII, aldehyde reductas 21.6 5.4E+02 0.018 24.7 12.5 31 389-420 10-46 (342)
452 1spf_A Pulmonary surfactant-as 21.6 46 0.0016 23.0 1.8 17 22-38 17-33 (35)
453 1jdq_A TM006 protein, hypothet 21.3 3E+02 0.01 23.1 7.4 48 469-524 38-85 (98)
454 2g1u_A Hypothetical protein TM 21.2 54 0.0018 28.9 2.9 92 389-491 18-118 (155)
455 4hp8_A 2-deoxy-D-gluconate 3-d 20.9 3.6E+02 0.012 26.3 9.1 70 389-461 8-87 (247)
456 1ja9_A 4HNR, 1,3,6,8-tetrahydr 20.9 2.1E+02 0.0072 26.9 7.3 71 389-461 20-107 (274)
457 3sx2_A Putative 3-ketoacyl-(ac 20.8 2.9E+02 0.0098 26.4 8.4 30 389-418 12-46 (278)
458 2wyu_A Enoyl-[acyl carrier pro 20.7 2.2E+02 0.0077 26.9 7.5 32 389-420 7-45 (261)
459 3hwr_A 2-dehydropantoate 2-red 20.6 3.2E+02 0.011 27.1 8.9 90 390-490 19-119 (318)
No 1
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.63 E-value=5.3e-15 Score=145.84 Aligned_cols=148 Identities=15% Similarity=0.189 Sum_probs=109.8
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCC
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~ 445 (595)
......+...+.. ..++.+|||||||+|.++..|+++ .|+|+|+++.++..++.+ +...++. +.+...+..
T Consensus 31 ~~~~~~~l~~l~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~ 106 (257)
T 3f4k_A 31 PEATRKAVSFINE---LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNEN-AVKANCADRVKGITGSMD 106 (257)
T ss_dssp HHHHHHHHTTSCC---CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHHhc---CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-HHHcCCCCceEEEECChh
Confidence 3444555555543 235779999999999999999885 799999999888777644 3444554 667778888
Q ss_pred CCCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCc--CchhHHHH----------HHHHHHHH
Q 007641 446 RLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQK--LPEDVEIW----------NAMSQLIK 513 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~--l~e~i~~w----------~~le~Lak 513 (595)
.+|+++++||+|+|.. +++|.+...+|.++.|+|||||+|++..+..... .......| ..+..+++
T Consensus 107 ~~~~~~~~fD~v~~~~--~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 184 (257)
T 3f4k_A 107 NLPFQNEELDLIWSEG--AIYNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKME 184 (257)
T ss_dssp SCSSCTTCEEEEEEES--CSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHH
T ss_pred hCCCCCCCEEEEEecC--hHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 8999999999999986 4556688999999999999999999986432211 11111222 56788999
Q ss_pred HcCCEEEEEee
Q 007641 514 AMCWELVSISK 524 (595)
Q Consensus 514 ~~Gw~~v~~~~ 524 (595)
.+||.++....
T Consensus 185 ~aGf~~v~~~~ 195 (257)
T 3f4k_A 185 RAGYTPTAHFI 195 (257)
T ss_dssp HTTEEEEEEEE
T ss_pred HCCCeEEEEEE
Confidence 99999887543
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.63 E-value=1.4e-15 Score=153.86 Aligned_cols=107 Identities=23% Similarity=0.252 Sum_probs=85.1
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
.+++.|....+ ...+|||||||+|.++..|+++ .|+|+|+++.|+ +.|++ ...+.+.+.+++.+|+
T Consensus 28 ~l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml-----~~a~~-~~~v~~~~~~~e~~~~ 95 (257)
T 4hg2_A 28 ALFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQI-----RQALR-HPRVTYAVAPAEDTGL 95 (257)
T ss_dssp HHHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHH-----HTCCC-CTTEEEEECCTTCCCC
T ss_pred HHHHHHHHhcC------CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhh-----hhhhh-cCCceeehhhhhhhcc
Confidence 44556655544 2579999999999999999986 799999997654 33332 3356677788899999
Q ss_pred CCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
++++||+|+|.. ++++.++..+|.+++|+|||||+|++...
T Consensus 96 ~~~sfD~v~~~~--~~h~~~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 96 PPASVDVAIAAQ--AMHWFDLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp CSSCEEEEEECS--CCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCcccEEEEee--ehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence 999999999986 33556889999999999999999988753
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.62 E-value=4.4e-15 Score=147.40 Aligned_cols=135 Identities=17% Similarity=0.168 Sum_probs=100.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..++.. +...+++ +.+...+...+||++++||+|+|..+ ++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~-l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAF-IEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA-AH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC-GG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh-hH
Confidence 5789999999999999999885 799999999888777643 3344544 56677788889999999999999862 44
Q ss_pred cccCHHHHHHHHHHhccCCcEEEEEeCCCCCc--C---chhH-----------HHHHHHHHHHHHcCCEEEEEeec
Q 007641 466 WHIEGGKLLLELNRVLRPGGFFIWSATPVYQK--L---PEDV-----------EIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 466 ~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~--l---~e~i-----------~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
|..++..+|.++.|+|||||+|++..+..... . .... .....+..+++.+||.++.....
T Consensus 115 ~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 115 HFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 44578999999999999999999974321110 0 0000 01256788899999998776544
No 4
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.62 E-value=9.4e-15 Score=145.55 Aligned_cols=149 Identities=21% Similarity=0.274 Sum_probs=107.6
Q ss_pred hHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCC
Q 007641 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT 444 (595)
Q Consensus 370 a~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~ 444 (595)
.....+.+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++... ...++. +.+...+.
T Consensus 46 ~~~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~ 120 (273)
T 3bus_A 46 TDRLTDEMIALLDV----RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARA-TAAGLANRVTFSYADA 120 (273)
T ss_dssp HHHHHHHHHHHSCC----CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCT
T ss_pred HHHHHHHHHHhcCC----CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH-HhcCCCcceEEEECcc
Confidence 34445555555542 35789999999999999999873 7999999988877765443 334443 66777788
Q ss_pred CCCCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchh----HHH------------HHHH
Q 007641 445 ERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPED----VEI------------WNAM 508 (595)
Q Consensus 445 ~~LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~----i~~------------w~~l 508 (595)
..+|+++++||+|++..+ +++..+...+|.++.|+|||||+|++..+......... ... -..+
T Consensus 121 ~~~~~~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (273)
T 3bus_A 121 MDLPFEDASFDAVWALES-LHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEY 199 (273)
T ss_dssp TSCCSCTTCEEEEEEESC-TTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHH
T ss_pred ccCCCCCCCccEEEEech-hhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHH
Confidence 889999999999999862 33334789999999999999999999864321111110 110 1677
Q ss_pred HHHHHHcCCEEEEEee
Q 007641 509 SQLIKAMCWELVSISK 524 (595)
Q Consensus 509 e~Lak~~Gw~~v~~~~ 524 (595)
..+++.+||.++....
T Consensus 200 ~~~l~~aGf~~~~~~~ 215 (273)
T 3bus_A 200 ESDVRQAELVVTSTVD 215 (273)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHcCCeEEEEEE
Confidence 8899999999876644
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.62 E-value=7e-15 Score=140.27 Aligned_cols=144 Identities=13% Similarity=0.151 Sum_probs=104.1
Q ss_pred CEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 391 RVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
.+|||||||+|.++..|+.+ .|+++|+++.++..++.... ..++ .+.+...+...+++++++||+|++..+ ++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-l~ 122 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIA-DANLNDRIQIVQGDVHNIPIEDNYADLIVSRGS-VF 122 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEECBTTBCSSCTTCEEEEEEESC-GG
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHH-hccccCceEEEEcCHHHCCCCcccccEEEECch-Hh
Confidence 39999999999999999885 79999999988877764443 3343 366777888889999999999999862 33
Q ss_pred cccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCch-------------------hH--HHHHHHHHHHHHcCCEEEEEee
Q 007641 466 WHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPE-------------------DV--EIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 466 ~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e-------------------~i--~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
+..++..+|.+++|+|||||+|++..+........ .. ..-..+..+++.+||..+....
T Consensus 123 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 123 FWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEIIL 202 (219)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred hccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEe
Confidence 33477999999999999999999985432110000 00 1126788899999999877654
Q ss_pred cccCceEEEEEEeC
Q 007641 525 DTINKVGIAVYRKP 538 (595)
Q Consensus 525 ~~l~~~giaI~~KP 538 (595)
.. .....++.|+
T Consensus 203 ~~--~~~~~~~~k~ 214 (219)
T 3dlc_A 203 GD--EGFWIIISKT 214 (219)
T ss_dssp ET--TEEEEEEBCC
T ss_pred cC--CceEEEEecc
Confidence 42 2233444444
No 6
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.62 E-value=9.6e-15 Score=145.69 Aligned_cols=147 Identities=16% Similarity=0.195 Sum_probs=109.7
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~ 446 (595)
.....+...+.. ..++.+|||||||+|.++..|+++ .|+|+|+++.++..++... ...+++ +.+...+...
T Consensus 32 ~~~~~~l~~l~~---~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 32 EVTLKALSFIDN---LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNA-RQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp HHHHHHHTTCCC---CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCTTS
T ss_pred HHHHHHHHhccc---CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHH-HHcCCCcCcEEEEcChhh
Confidence 344445555442 236789999999999999999985 7999999998887776443 344543 6777788888
Q ss_pred CCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCC--cCchhHHHH----------HHHHHHHHH
Q 007641 447 LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQ--KLPEDVEIW----------NAMSQLIKA 514 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~--~l~e~i~~w----------~~le~Lak~ 514 (595)
+|+++++||+|+|.. +++|.+...+|.++.|+|||||+|++..+.... ........| ..+..+++.
T Consensus 108 ~~~~~~~fD~i~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (267)
T 3kkz_A 108 LPFRNEELDLIWSEG--AIYNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHK 185 (267)
T ss_dssp CCCCTTCEEEEEESS--CGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEcC--CceecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 999999999999987 455668899999999999999999998653221 111111222 578889999
Q ss_pred cCCEEEEEee
Q 007641 515 MCWELVSISK 524 (595)
Q Consensus 515 ~Gw~~v~~~~ 524 (595)
+||.++....
T Consensus 186 aGf~~v~~~~ 195 (267)
T 3kkz_A 186 AGYLPVATFI 195 (267)
T ss_dssp TTEEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9999886643
No 7
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.61 E-value=1.8e-15 Score=148.71 Aligned_cols=171 Identities=15% Similarity=0.125 Sum_probs=110.5
Q ss_pred ccchhhhcCceeecCCCCccccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhH
Q 007641 346 HQNWVKVTGEYLTFPGGGTQFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDE 422 (595)
Q Consensus 346 ~q~W~~~~g~~~~Fpggg~~F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di 422 (595)
...|..+...+..+.++...+......+...+...+.. .++.+|||||||+|.++..|+.+ .|+++|+++.++
T Consensus 54 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~ 129 (254)
T 1xtp_A 54 LEYWRTVPATVSGVLGGMDHVHDVDIEGSRNFIASLPG----HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHML 129 (254)
T ss_dssp HHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHTSTT----CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHH
T ss_pred hhHHhcCCccccceecCcCccCHHHHHHHHHHHHhhcc----cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHH
Confidence 34555544433323222222323333344444444432 35789999999999999988875 599999998776
Q ss_pred HHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccccc---CHHHHHHHHHHhccCCcEEEEEeCCCCC--c
Q 007641 423 HEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWHI---EGGKLLLELNRVLRPGGFFIWSATPVYQ--K 497 (595)
Q Consensus 423 ~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~---d~~~lL~El~RvLKPGG~Lvis~pp~~~--~ 497 (595)
..++.+.... ..+.+...+...+++++++||+|+|.. +++|. +...+|.+++|+|||||+|+|..+.... .
T Consensus 130 ~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~--~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~ 205 (254)
T 1xtp_A 130 EEAKRELAGM--PVGKFILASMETATLPPNTYDLIVIQW--TAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF 205 (254)
T ss_dssp HHHHHHTTTS--SEEEEEESCGGGCCCCSSCEEEEEEES--CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE
T ss_pred HHHHHHhccC--CceEEEEccHHHCCCCCCCeEEEEEcc--hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc
Confidence 5554332111 235566677788899889999999987 44454 3579999999999999999998642110 0
Q ss_pred C-----chhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 498 L-----PEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 498 l-----~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
. ......-..+..+++.+||.++....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 206 LVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp EEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred eecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 0 00001226788899999999887644
No 8
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.61 E-value=1.3e-14 Score=139.62 Aligned_cols=149 Identities=17% Similarity=0.097 Sum_probs=108.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..++..... .++ .+.+...+...+++++++||+|++..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNK-LGLKNVEVLKSEENKIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-HTCTTEEEEECBTTBCSSCSSCEEEEEEESC
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-cCCCcEEEEecccccCCCCCCCeeEEEeehh
Confidence 5789999999999999888773 699999999988777655443 344 466777778888999999999999862
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCc--Cc--hhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEEEeC
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQK--LP--EDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYRKP 538 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~--l~--e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~KP 538 (595)
+++..+...+|.++.|+|||||+|++........ .. ........+..+++.+||+.+...... ....+.+++|+
T Consensus 116 -l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-~~~~~~~~~k~ 193 (219)
T 3dh0_A 116 -FHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVG-KYCFGVYAMIV 193 (219)
T ss_dssp -GGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEET-TTEEEEEEECC
T ss_pred -hhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeC-CceEEEEEEec
Confidence 3333477899999999999999999985322110 00 001123678889999999988875543 34556677766
Q ss_pred CC
Q 007641 539 TS 540 (595)
Q Consensus 539 ~~ 540 (595)
..
T Consensus 194 ~~ 195 (219)
T 3dh0_A 194 KQ 195 (219)
T ss_dssp --
T ss_pred cc
Confidence 43
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.60 E-value=1.3e-14 Score=146.84 Aligned_cols=152 Identities=14% Similarity=0.179 Sum_probs=107.2
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCC
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTE 445 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~ 445 (595)
....+.+...++......++.+|||||||+|.++..|+++ .|+|+|+++.++..++.... ..++ .+.+...+..
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~~~d~~ 142 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNN-QAGLADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH-HHTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-hcCCCcceEEEEcCcc
Confidence 3444555555510001235789999999999999999875 79999999988877764433 3343 3667777888
Q ss_pred CCCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCc-hhHH------------HHHHHHHHH
Q 007641 446 RLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLP-EDVE------------IWNAMSQLI 512 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~-e~i~------------~w~~le~La 512 (595)
.+|+++++||+|++..+ +++..++..+|.++.|+|||||+|++..+....... .... ....+..++
T Consensus 143 ~~~~~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (297)
T 2o57_A 143 EIPCEDNSYDFIWSQDA-FLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLA 221 (297)
T ss_dssp SCSSCTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHH
T ss_pred cCCCCCCCEeEEEecch-hhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 89999999999999862 333346799999999999999999998643221111 0001 125677899
Q ss_pred HHcCCEEEEEee
Q 007641 513 KAMCWELVSISK 524 (595)
Q Consensus 513 k~~Gw~~v~~~~ 524 (595)
..+||.++....
T Consensus 222 ~~aGf~~~~~~~ 233 (297)
T 2o57_A 222 KECGLVTLRTFS 233 (297)
T ss_dssp HHTTEEEEEEEE
T ss_pred HHCCCeEEEEEE
Confidence 999999887654
No 10
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=3e-14 Score=135.76 Aligned_cols=131 Identities=16% Similarity=0.096 Sum_probs=99.9
Q ss_pred CCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcccc
Q 007641 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h 467 (595)
+.+|||||||+|.++..|+.+ .|+|+|+++.++ ..++++...+.+...+...+++++++||+|++.. +++|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~l~~ 114 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLV-----ELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWY--SLIH 114 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHH-----HHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEES--SSTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHH-----HHHHHhCCCCeEEeCcccccccCCCCeEEEEehh--hHhc
Confidence 678999999999999999986 799999997654 4444555566777788888899899999999986 3444
Q ss_pred c---CHHHHHHHHHHhccCCcEEEEEeCCCCC--cC-----chhHHHHHHHHHHHHHcCCEEEEEeeccc
Q 007641 468 I---EGGKLLLELNRVLRPGGFFIWSATPVYQ--KL-----PEDVEIWNAMSQLIKAMCWELVSISKDTI 527 (595)
Q Consensus 468 ~---d~~~lL~El~RvLKPGG~Lvis~pp~~~--~l-----~e~i~~w~~le~Lak~~Gw~~v~~~~~~l 527 (595)
. +...+|.++.|+|||||+|++..+.... .+ .........+..+++.+||.++.......
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 115 MGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp CCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 4 6689999999999999999998643211 00 00011236788899999999988876654
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.59 E-value=8.2e-15 Score=144.46 Aligned_cols=131 Identities=15% Similarity=0.188 Sum_probs=97.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcC---CCeeEeecCCCCCCCCCCceeEEEecc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERG---IPAISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~erg---i~~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
.++.+|||||||+|.++..|+.+ .|+|+|+++.++. .|+++. ..+.+...+...+|+++++||+|++..
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~-----~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVN-----MANERVSGNNKIIFEANDILTKEFPENNFDLIYSRD 128 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHH-----HHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHH-----HHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHH
Confidence 45789999999999999999884 7999999976554 444443 346677778888899999999999986
Q ss_pred cCccccc---CHHHHHHHHHHhccCCcEEEEEeCCCCC--cCchhHH-----------HHHHHHHHHHHcCCEEEEEeec
Q 007641 462 CRVPWHI---EGGKLLLELNRVLRPGGFFIWSATPVYQ--KLPEDVE-----------IWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 462 c~v~~h~---d~~~lL~El~RvLKPGG~Lvis~pp~~~--~l~e~i~-----------~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+++|. +...+|.++.|+|||||+|++..+.... ....... ....+..+++.+||..+.....
T Consensus 129 --~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 129 --AILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp --CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred --HHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 44454 5689999999999999999998642211 1111111 1267888999999998876543
No 12
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.59 E-value=1.4e-14 Score=148.42 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=104.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEeccc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
.++.+|||||||+|.++..|+++ .|+|+|+++.++..++.+ +...++. +.+...+...+|+++++||+|++..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~- 193 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRR-ARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE- 193 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES-
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHcCCCCceEEEECChhcCCCCCCCEeEEEECC-
Confidence 46789999999999999999875 799999999888777644 3445544 6777788888999999999999986
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEeCCCCC---cCchhHH-----------HHHHHHHHHHHcCCEEEEEeec
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQ---KLPEDVE-----------IWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~---~l~e~i~-----------~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+++|.+...+|.++.|+|||||+|++..+.... ....... ....+..+++.+||.++.....
T Consensus 194 -~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 194 -STMYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp -CGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred -chhhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 555667899999999999999999988643222 1111111 1267888999999998876543
No 13
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.59 E-value=4.2e-15 Score=144.35 Aligned_cols=127 Identities=17% Similarity=0.104 Sum_probs=94.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..++ ++.. .+.+...+...+ +++++||+|+|.. ++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~--~l 113 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQ-----GRLKDGITYIHSRFEDA-QLPRRYDNIVLTH--VL 113 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHH-----HHSCSCEEEEESCGGGC-CCSSCEEEEEEES--CG
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHH-----HhhhCCeEEEEccHHHc-CcCCcccEEEEhh--HH
Confidence 4678999999999999999885 7999999977655444 3322 456666666666 5678999999987 44
Q ss_pred ccc-CHHHHHHHHH-HhccCCcEEEEEeCCCCC----------cCc------hh--------HHHHHHHHHHHHHcCCEE
Q 007641 466 WHI-EGGKLLLELN-RVLRPGGFFIWSATPVYQ----------KLP------ED--------VEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 466 ~h~-d~~~lL~El~-RvLKPGG~Lvis~pp~~~----------~l~------e~--------i~~w~~le~Lak~~Gw~~ 519 (595)
+|. ++..+|++++ |+|||||+|++..+.... ..+ .. ......+..+++.+||.+
T Consensus 114 ~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 114 EHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp GGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred HhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeE
Confidence 454 7899999999 999999999998754321 000 00 001268889999999998
Q ss_pred EEEe
Q 007641 520 VSIS 523 (595)
Q Consensus 520 v~~~ 523 (595)
+...
T Consensus 194 ~~~~ 197 (250)
T 2p7i_A 194 TYRS 197 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8774
No 14
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.59 E-value=1.9e-14 Score=138.57 Aligned_cols=142 Identities=14% Similarity=0.137 Sum_probs=101.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcC-CCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG-IPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~erg-i~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..++ ++. ..+.+...+...++++ ++||+|+|.. ++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~-----~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~--~l 116 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAK-----EKLPKEFSITEGDFLSFEVP-TSIDTIVSTY--AF 116 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHH-----HHSCTTCCEESCCSSSCCCC-SCCSEEEEES--CG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHH-----HhCCCceEEEeCChhhcCCC-CCeEEEEECc--ch
Confidence 5789999999999999999985 7899999977654443 332 2456677778888888 8999999986 44
Q ss_pred ccc-CHHH--HHHHHHHhccCCcEEEEEeCCCCCcC-----------------chhHH-----HHHHHHHHHHHcCCEEE
Q 007641 466 WHI-EGGK--LLLELNRVLRPGGFFIWSATPVYQKL-----------------PEDVE-----IWNAMSQLIKAMCWELV 520 (595)
Q Consensus 466 ~h~-d~~~--lL~El~RvLKPGG~Lvis~pp~~~~l-----------------~e~i~-----~w~~le~Lak~~Gw~~v 520 (595)
+|. ++.. +|.++.|+|||||+|++..+...... ..... ....+..+++.+||+++
T Consensus 117 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 196 (220)
T 3hnr_A 117 HHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVT 196 (220)
T ss_dssp GGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEE
T ss_pred hcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEE
Confidence 555 3444 99999999999999999864321100 01111 11678899999999987
Q ss_pred EEeecccCceEEEEEEeCCC
Q 007641 521 SISKDTINKVGIAVYRKPTS 540 (595)
Q Consensus 521 ~~~~~~l~~~giaI~~KP~~ 540 (595)
..... ....+..-+++..
T Consensus 197 ~~~~~--~~~w~~~~~~~~~ 214 (220)
T 3hnr_A 197 FTRLN--HFVWVMEATKQLE 214 (220)
T ss_dssp EEECS--SSEEEEEEEECSC
T ss_pred Eeecc--ceEEEEeehhhhh
Confidence 76554 3455666665543
No 15
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.59 E-value=1.8e-14 Score=145.83 Aligned_cols=101 Identities=15% Similarity=0.166 Sum_probs=79.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC------CcEEEeCCchhHHHHHHHHHHHc-CCCeeEeecCCCCCCCCCCceeEEEec
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR------GVLTMSFAPKDEHEAQVQFALER-GIPAISAVMGTERLPFPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r------~V~giDisp~di~~aqvq~A~er-gi~~~~~v~d~~~LPfpd~sFDlV~~~ 460 (595)
+++.+|||||||+|.++..|+++ .|+|+|+++.|+..|+.+..... ..++.+...+...+|++ .||+|++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceee
Confidence 46889999999999999999874 58999999998887765443322 23456677778888875 59999997
Q ss_pred ccCcccccC---HHHHHHHHHHhccCCcEEEEEeC
Q 007641 461 RCRVPWHIE---GGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 461 ~c~v~~h~d---~~~lL~El~RvLKPGG~Lvis~p 492 (595)
. +++++. ...+|++++|+|||||+|+++..
T Consensus 147 ~--~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 147 F--TLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp S--CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred e--eeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 6 344443 25789999999999999999854
No 16
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.59 E-value=8.6e-15 Score=142.80 Aligned_cols=140 Identities=23% Similarity=0.241 Sum_probs=102.4
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHc--CCCeeEeecCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALER--GIPAISAVMGTERL 447 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~er--gi~~~~~v~d~~~L 447 (595)
.++..+...++ ++.+|||||||+|.++..|+++ .|+++|+++.++..+ +++ ...+.+...+...+
T Consensus 42 ~~~~~l~~~~~------~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a-----~~~~~~~~~~~~~~d~~~~ 110 (242)
T 3l8d_A 42 TIIPFFEQYVK------KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKG-----KERGEGPDLSFIKGDLSSL 110 (242)
T ss_dssp THHHHHHHHSC------TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHH-----HTTTCBTTEEEEECBTTBC
T ss_pred HHHHHHHHHcC------CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHH-----HhhcccCCceEEEcchhcC
Confidence 44566666554 4779999999999999999986 799999997655443 333 34566777788889
Q ss_pred CCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCc-----hh--------HHHHHHHHHHHHH
Q 007641 448 PFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLP-----ED--------VEIWNAMSQLIKA 514 (595)
Q Consensus 448 Pfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~-----e~--------i~~w~~le~Lak~ 514 (595)
|+++++||+|++.. .+++..++..+|.+++|+|||||+|++..+....... .. ...-..+..++..
T Consensus 111 ~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 189 (242)
T 3l8d_A 111 PFENEQFEAIMAIN-SLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKE 189 (242)
T ss_dssp SSCTTCEEEEEEES-CTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHH
T ss_pred CCCCCCccEEEEcC-hHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHH
Confidence 99999999999986 2333347789999999999999999998632211000 00 0011578899999
Q ss_pred cCCEEEEEe
Q 007641 515 MCWELVSIS 523 (595)
Q Consensus 515 ~Gw~~v~~~ 523 (595)
+||.++...
T Consensus 190 ~Gf~~~~~~ 198 (242)
T 3l8d_A 190 QGFKVVDGI 198 (242)
T ss_dssp TTEEEEEEE
T ss_pred cCCEEEEee
Confidence 999988763
No 17
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.58 E-value=1.7e-14 Score=142.14 Aligned_cols=145 Identities=14% Similarity=0.123 Sum_probs=105.8
Q ss_pred hHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCC
Q 007641 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT 444 (595)
Q Consensus 370 a~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~ 444 (595)
....+..+...+.. .++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.. +...++. +.+...+.
T Consensus 21 ~~~~~~~l~~~~~~----~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~~~v~~~~~d~ 95 (256)
T 1nkv_A 21 TEEKYATLGRVLRM----KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRR-AEELGVSERVHFIHNDA 95 (256)
T ss_dssp CHHHHHHHHHHTCC----CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCC
T ss_pred CHHHHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH-HHhcCCCcceEEEECCh
Confidence 34555666666542 35789999999999999999874 799999999988777644 3444543 66777778
Q ss_pred CCCCCCCCceeEEEecccCccccc-CHHHHHHHHHHhccCCcEEEEEeCCCCCcC-ch------------hHHHHHHHHH
Q 007641 445 ERLPFPGIVFDAVHCARCRVPWHI-EGGKLLLELNRVLRPGGFFIWSATPVYQKL-PE------------DVEIWNAMSQ 510 (595)
Q Consensus 445 ~~LPfpd~sFDlV~~~~c~v~~h~-d~~~lL~El~RvLKPGG~Lvis~pp~~~~l-~e------------~i~~w~~le~ 510 (595)
..+++ +++||+|+|.. +.+|. +...+|.+++|+|||||+|++..+...... .. .......+..
T Consensus 96 ~~~~~-~~~fD~V~~~~--~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVG--ATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVG 172 (256)
T ss_dssp TTCCC-SSCEEEEEEES--CGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHH
T ss_pred HhCCc-CCCCCEEEECC--ChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHH
Confidence 88887 78999999976 34444 779999999999999999999864321110 00 0011257888
Q ss_pred HHHHcCCEEEEE
Q 007641 511 LIKAMCWELVSI 522 (595)
Q Consensus 511 Lak~~Gw~~v~~ 522 (595)
+++.+||..+..
T Consensus 173 ~l~~aGf~~~~~ 184 (256)
T 1nkv_A 173 AFDDLGYDVVEM 184 (256)
T ss_dssp HHHTTTBCCCEE
T ss_pred HHHHCCCeeEEE
Confidence 999999987654
No 18
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.58 E-value=4.9e-15 Score=145.62 Aligned_cols=149 Identities=15% Similarity=0.154 Sum_probs=101.5
Q ss_pred HHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCC
Q 007641 375 DFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPG 451 (595)
Q Consensus 375 d~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd 451 (595)
.++..++..+....++.+|||||||+|.++..|+.+ .|+++|+++.++..++..........+.+...+...+++++
T Consensus 65 ~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 144 (241)
T 2ex4_A 65 KFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEP 144 (241)
T ss_dssp HHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCS
T ss_pred HHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCC
Confidence 334444433222235789999999999999998875 78999999887766654432221223456667778888888
Q ss_pred CceeEEEecccCccccc-CH--HHHHHHHHHhccCCcEEEEEeCCCCC-----cCch-hHHHHHHHHHHHHHcCCEEEEE
Q 007641 452 IVFDAVHCARCRVPWHI-EG--GKLLLELNRVLRPGGFFIWSATPVYQ-----KLPE-DVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 452 ~sFDlV~~~~c~v~~h~-d~--~~lL~El~RvLKPGG~Lvis~pp~~~-----~l~e-~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
++||+|++.. +++|. ++ ..+|.++.|+|||||+|++..+.... .... .......+..+++.+||.++..
T Consensus 145 ~~fD~v~~~~--~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 145 DSYDVIWIQW--VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp SCEEEEEEES--CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEEEcc--hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 8999999986 44454 33 48999999999999999997542211 0000 0012367888999999998877
Q ss_pred eec
Q 007641 523 SKD 525 (595)
Q Consensus 523 ~~~ 525 (595)
...
T Consensus 223 ~~~ 225 (241)
T 2ex4_A 223 ERQ 225 (241)
T ss_dssp EEC
T ss_pred eec
Confidence 543
No 19
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.57 E-value=1.4e-14 Score=139.19 Aligned_cols=128 Identities=20% Similarity=0.229 Sum_probs=94.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..++.+. + +.+...+...++ ++++||+|+|.. +++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~--~~~~~~d~~~~~-~~~~fD~v~~~~--~l~ 113 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL----G--RPVRTMLFHQLD-AIDAYDAVWAHA--CLL 113 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----T--SCCEECCGGGCC-CCSCEEEEEECS--CGG
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----C--CceEEeeeccCC-CCCcEEEEEecC--chh
Confidence 4789999999999999999986 7999999987765554332 3 334556667777 778999999987 444
Q ss_pred cc---CHHHHHHHHHHhccCCcEEEEEeCCCCCcCch----h--HHHHHHHHHHHHHcC-CEEEEEeec
Q 007641 467 HI---EGGKLLLELNRVLRPGGFFIWSATPVYQKLPE----D--VEIWNAMSQLIKAMC-WELVSISKD 525 (595)
Q Consensus 467 h~---d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e----~--i~~w~~le~Lak~~G-w~~v~~~~~ 525 (595)
|. +...+|.++.|+|||||+|++..+........ . ......+..+++.+| |.++.....
T Consensus 114 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 114 HVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 54 45799999999999999999986543211000 0 012367888999999 998876543
No 20
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=2.5e-14 Score=139.26 Aligned_cols=146 Identities=17% Similarity=0.172 Sum_probs=101.6
Q ss_pred HHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 374 id~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
...+...+.. ..++.+|||||||+|.++..|+++ .|+++|+++.++..++.... ..+ .+.+...+...+++
T Consensus 32 ~~~~~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~-~~~~~~~d~~~~~~ 106 (234)
T 3dtn_A 32 YGVSVSIASV---DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFR-GNL-KVKYIEADYSKYDF 106 (234)
T ss_dssp HHHHHHTCCC---SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTC-SCT-TEEEEESCTTTCCC
T ss_pred HHHHHHHhhc---CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhc-cCC-CEEEEeCchhccCC
Confidence 3445555442 345789999999999999999885 78999999876655543221 112 56677778888888
Q ss_pred CCCceeEEEecccCcccccCH-H--HHHHHHHHhccCCcEEEEEeCCCCCc--------------------CchhHH---
Q 007641 450 PGIVFDAVHCARCRVPWHIEG-G--KLLLELNRVLRPGGFFIWSATPVYQK--------------------LPEDVE--- 503 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h~d~-~--~lL~El~RvLKPGG~Lvis~pp~~~~--------------------l~e~i~--- 503 (595)
+ ++||+|++.. +++|... . .+|++++|+|||||+|++..+..... ....+.
T Consensus 107 ~-~~fD~v~~~~--~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (234)
T 3dtn_A 107 E-EKYDMVVSAL--SIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGY 183 (234)
T ss_dssp C-SCEEEEEEES--CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC
T ss_pred C-CCceEEEEeC--ccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 7 8999999986 4455543 2 59999999999999999986422110 000000
Q ss_pred ---------HHHHHHHHHHHcCCEEEEEeeccc
Q 007641 504 ---------IWNAMSQLIKAMCWELVSISKDTI 527 (595)
Q Consensus 504 ---------~w~~le~Lak~~Gw~~v~~~~~~l 527 (595)
....+..+++.+||..+......+
T Consensus 184 ~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 216 (234)
T 3dtn_A 184 ERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYY 216 (234)
T ss_dssp ----CCCCCBHHHHHHHHHHTTCEEEEEEEEET
T ss_pred HhcccccccCHHHHHHHHHHcCCCceeeeeeec
Confidence 014667799999999988765543
No 21
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.57 E-value=7.2e-14 Score=137.51 Aligned_cols=136 Identities=21% Similarity=0.224 Sum_probs=100.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..++.... ..+++ +.+...+...+|+++++||+|+|..+ +
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-l 97 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQ-EKGVENVRFQQGTAESLPFPDDSFDIITCRYA-A 97 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHH-HHTCCSEEEEECBTTBCCSCTTCEEEEEEESC-G
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHH-HcCCCCeEEEecccccCCCCCCcEEEEEECCc-h
Confidence 35789999999999999999885 79999999988877764443 34443 56667778889999999999999862 3
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEEeCCCCCc--Cch--------------hHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWSATPVYQK--LPE--------------DVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~--l~e--------------~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
++..+...+|.+++|+|||||+|++..+..... ... .......+..+++.+||..+.....
T Consensus 98 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 98 HHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 333477999999999999999999975422110 000 0001256788899999998776543
No 22
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.56 E-value=5.7e-14 Score=135.41 Aligned_cols=103 Identities=28% Similarity=0.344 Sum_probs=82.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.... ..+..+.+...+...+++++++||+|++..++.++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAK-SRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-hcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 3779999999999999999886 79999999988877764443 33455677777888888888899999998742244
Q ss_pred cc-CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 467 HI-EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 467 h~-d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+. +...+|.++.++|||||+|++..+
T Consensus 117 ~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 43 557999999999999999998854
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.55 E-value=9e-14 Score=134.22 Aligned_cols=162 Identities=12% Similarity=0.133 Sum_probs=106.9
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC------CeeEee
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI------PAISAV 441 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi------~~~~~v 441 (595)
...+.+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++.++.. .++ .+.+..
T Consensus 16 ~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~ 90 (219)
T 3jwg_A 16 QRLGTVVAVLKS----VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKI-DRLPEMQRKRISLFQ 90 (219)
T ss_dssp HHHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTG-GGSCHHHHTTEEEEE
T ss_pred HHHHHHHHHHhh----cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHh-hccccccCcceEEEe
Confidence 344455555432 24779999999999999999874 699999998887776644332 222 456667
Q ss_pred cCCCCCCCCCCceeEEEecccCcccccCH---HHHHHHHHHhccCCcEEEEEeCCCCC----cCch------------hH
Q 007641 442 MGTERLPFPGIVFDAVHCARCRVPWHIEG---GKLLLELNRVLRPGGFFIWSATPVYQ----KLPE------------DV 502 (595)
Q Consensus 442 ~d~~~LPfpd~sFDlV~~~~c~v~~h~d~---~~lL~El~RvLKPGG~Lvis~pp~~~----~l~e------------~i 502 (595)
.+...+++++++||+|+|.. +++|... ..+|.++.|+|||||+|+++....+. .++. ..
T Consensus 91 ~d~~~~~~~~~~fD~V~~~~--~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (219)
T 3jwg_A 91 SSLVYRDKRFSGYDAATVIE--VIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTR 168 (219)
T ss_dssp CCSSSCCGGGTTCSEEEEES--CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCH
T ss_pred CcccccccccCCCCEEEEHH--HHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecH
Confidence 77777788788999999986 4555543 58999999999999977665332221 1110 11
Q ss_pred HHH-HHHHHHHHHcCCEEEEEeeccc-----CceEEEEEEeCCC
Q 007641 503 EIW-NAMSQLIKAMCWELVSISKDTI-----NKVGIAVYRKPTS 540 (595)
Q Consensus 503 ~~w-~~le~Lak~~Gw~~v~~~~~~l-----~~~giaI~~KP~~ 540 (595)
..+ .-+..++...||.+........ ....++||+|...
T Consensus 169 ~~l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~~~ 212 (219)
T 3jwg_A 169 KEFQTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFTLGAG 212 (219)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEEECC-
T ss_pred HHHHHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEeccCC
Confidence 111 2344789999998765532211 1235888887654
No 24
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.55 E-value=1.9e-14 Score=142.07 Aligned_cols=100 Identities=17% Similarity=0.237 Sum_probs=80.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..++.... ...+.+...+...+|+++++||+|+|.. .++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 119 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDAYNVVLSSL-ALH 119 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTCEEEEEEES-CGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCCeEEEEEch-hhh
Confidence 5789999999999999999885 68999999776655442221 3456677778888999999999999986 233
Q ss_pred cccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 466 WHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 466 ~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+..+...+|++++|+|||||+|++..+
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 120 YIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 334789999999999999999999743
No 25
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.55 E-value=5e-14 Score=140.72 Aligned_cols=135 Identities=19% Similarity=0.304 Sum_probs=100.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
.++.+|||||||+|.++..|+++ .|+++|+++.++..++... ...++ .+.+...+...+|+++++||+|++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~- 113 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENT-EKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF- 113 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCGGGCCSCTTCEEEEEEES-
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEcccccCCCCCCCeeEEEEec-
Confidence 46789999999999999999874 6999999998887776443 33444 45667777888999999999999986
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEeCCCCC-----cCchhHHHH-----------------HHHHHHHHHcCCEEE
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQ-----KLPEDVEIW-----------------NAMSQLIKAMCWELV 520 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~-----~l~e~i~~w-----------------~~le~Lak~~Gw~~v 520 (595)
.+.+..++..+|.++.|+|||||+|++..+.... ..+.....| ..+..+++.+||..+
T Consensus 114 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v 193 (276)
T 3mgg_A 114 VLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKI 193 (276)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeE
Confidence 2333347789999999999999999998642210 111111111 467789999999988
Q ss_pred EEee
Q 007641 521 SISK 524 (595)
Q Consensus 521 ~~~~ 524 (595)
....
T Consensus 194 ~~~~ 197 (276)
T 3mgg_A 194 RVEP 197 (276)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7754
No 26
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.55 E-value=2.6e-14 Score=140.34 Aligned_cols=143 Identities=14% Similarity=0.143 Sum_probs=99.6
Q ss_pred CchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC
Q 007641 368 NGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE 445 (595)
Q Consensus 368 ~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~ 445 (595)
.....+...+...++. ..++.+|||||||+|.++..|+++ .|+|+|+++.++ ..++++ +.+...+..
T Consensus 23 ~~~~~~~~~~~~~l~~---~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~---~~~~~~d~~ 91 (240)
T 3dli_A 23 GSRELVKARLRRYIPY---FKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMI-----KFCEGK---FNVVKSDAI 91 (240)
T ss_dssp CCHHHHHHHHGGGGGG---TTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHH-----HHHHTT---SEEECSCHH
T ss_pred CCHHHHHHHHHHHHhh---hcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHH-----HHHHhh---cceeeccHH
Confidence 3334445555555443 235789999999999999999885 799999996654 444444 445556655
Q ss_pred CC--CCCCCceeEEEecccCccccc-C--HHHHHHHHHHhccCCcEEEEEeCCCCCcC--------chhH--HHHHHHHH
Q 007641 446 RL--PFPGIVFDAVHCARCRVPWHI-E--GGKLLLELNRVLRPGGFFIWSATPVYQKL--------PEDV--EIWNAMSQ 510 (595)
Q Consensus 446 ~L--Pfpd~sFDlV~~~~c~v~~h~-d--~~~lL~El~RvLKPGG~Lvis~pp~~~~l--------~e~i--~~w~~le~ 510 (595)
.+ |+++++||+|+|.. +++|. + ...+|.++.|+|||||+|++..+...... +... ..-..+..
T Consensus 92 ~~~~~~~~~~fD~i~~~~--~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 169 (240)
T 3dli_A 92 EYLKSLPDKYLDGVMISH--FVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKF 169 (240)
T ss_dssp HHHHTSCTTCBSEEEEES--CGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHH
T ss_pred HHhhhcCCCCeeEEEECC--chhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHH
Confidence 44 88899999999986 44454 3 37999999999999999999875422110 0000 01167888
Q ss_pred HHHHcCCEEEEEe
Q 007641 511 LIKAMCWELVSIS 523 (595)
Q Consensus 511 Lak~~Gw~~v~~~ 523 (595)
+++.+||.++...
T Consensus 170 ~l~~aGf~~~~~~ 182 (240)
T 3dli_A 170 ILEYLGFRDVKIE 182 (240)
T ss_dssp HHHHHTCEEEEEE
T ss_pred HHHHCCCeEEEEE
Confidence 9999999977653
No 27
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.54 E-value=1.2e-13 Score=132.18 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=93.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcC-CCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG-IPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~erg-i~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++.. ++..+ ..+.+...+...+ +++++||+|+|.. ++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~-----a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~--~l 117 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAE-----AGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAH--WL 117 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHH-----HGGGCCTTEEEEECCTTSC-CCSSCEEEEEEES--CG
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHH-----HHhcCCCCeEEEecccccC-CCCCceeEEEEec--hh
Confidence 4679999999999999999885 79999999765544 44455 3455666777766 7889999999986 44
Q ss_pred cccCH---HHHHHHHHHhccCCcEEEEEeCCCCC-----------------cCchh--------HHHHHHHHHHHHHcCC
Q 007641 466 WHIEG---GKLLLELNRVLRPGGFFIWSATPVYQ-----------------KLPED--------VEIWNAMSQLIKAMCW 517 (595)
Q Consensus 466 ~h~d~---~~lL~El~RvLKPGG~Lvis~pp~~~-----------------~l~e~--------i~~w~~le~Lak~~Gw 517 (595)
+|... ..+|.++.|+|||||+|++..+.... .++.. ...-..+..+++.+||
T Consensus 118 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 197 (218)
T 3ou2_A 118 AHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGW 197 (218)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCC
Confidence 55543 79999999999999999998542210 00000 0012678899999999
Q ss_pred EEEEEeec
Q 007641 518 ELVSISKD 525 (595)
Q Consensus 518 ~~v~~~~~ 525 (595)
.+......
T Consensus 198 ~v~~~~~~ 205 (218)
T 3ou2_A 198 SCSVDEVH 205 (218)
T ss_dssp EEEEEEEE
T ss_pred EEEeeecc
Confidence 96655443
No 28
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.53 E-value=1.7e-13 Score=128.88 Aligned_cols=132 Identities=13% Similarity=0.067 Sum_probs=86.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCC-CCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP-FPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LP-fpd~sFDlV~~~~c~v 464 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..++.+.. ..++. +.+...+...++ +++++||+|+++..++
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~-~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLS-DLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH-HHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHH-HcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 5789999999999999999985 79999999999888775444 34444 444444445543 4578899999874333
Q ss_pred cc-------cc-CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHH---cCCEEEEEee
Q 007641 465 PW-------HI-EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKA---MCWELVSISK 524 (595)
Q Consensus 465 ~~-------h~-d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~---~Gw~~v~~~~ 524 (595)
+. +. ....+|.++.|+|||||+|++...+.... .......+..++.. .+|.+.....
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~ 168 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDG---GDMEKDAVLEYVIGLDQRVFTAMLYQP 168 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC---------CHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCC---CHHHHHHHHHHHHhCCCceEEEEEehh
Confidence 32 11 23578999999999999999886432211 11222344444444 4577665543
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.53 E-value=9.5e-14 Score=134.05 Aligned_cols=133 Identities=19% Similarity=0.221 Sum_probs=97.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC------CeeEeecCCCCCCCCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI------PAISAVMGTERLPFPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi------~~~~~v~d~~~LPfpd~sFDlV~~~ 460 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.. +...++ .+.+...+...+++++++||+|++.
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETA-ARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHH-HHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4789999999999999999886 799999998776555422 222333 2456677788889989999999998
Q ss_pred ccCccccc-CHH---HHHHHHHHhccCCcEEEEEeCCCCCcCchh--------------------------------HHH
Q 007641 461 RCRVPWHI-EGG---KLLLELNRVLRPGGFFIWSATPVYQKLPED--------------------------------VEI 504 (595)
Q Consensus 461 ~c~v~~h~-d~~---~lL~El~RvLKPGG~Lvis~pp~~~~l~e~--------------------------------i~~ 504 (595)
. +++|. ++. .+|.++.|+|||||+|++..+......... ...
T Consensus 109 ~--~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 109 A--FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp S--CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred c--hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 6 44444 555 899999999999999999854321110000 011
Q ss_pred HHHHHHHHHHcCCEEEEEee
Q 007641 505 WNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 505 w~~le~Lak~~Gw~~v~~~~ 524 (595)
...+..+++.+||.++....
T Consensus 187 ~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp HHHHHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEe
Confidence 36788899999999987754
No 30
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.53 E-value=2e-13 Score=132.76 Aligned_cols=117 Identities=21% Similarity=0.324 Sum_probs=87.0
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
.+.+.+...+... ..++.+|||||||+|.++..|+++ .|+++|+++.++..++... ...+..+.+...+...+++
T Consensus 22 ~~~~~~~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~ 98 (246)
T 1y8c_A 22 KWSDFIIEKCVEN--NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKF-RSQGLKPRLACQDISNLNI 98 (246)
T ss_dssp HHHHHHHHHHHTT--TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHH-HHTTCCCEEECCCGGGCCC
T ss_pred HHHHHHHHHHHHh--CCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHH-hhcCCCeEEEecccccCCc
Confidence 3445555554431 125789999999999999999885 6999999998887776444 3344456677777788887
Q ss_pred CCCceeEEEecccCcccc---cCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 450 PGIVFDAVHCARCRVPWH---IEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h---~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+ ++||+|++....+++. .+...+|.++.|+|||||+|++..+
T Consensus 99 ~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 99 N-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp S-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred c-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 7 8899999975123333 2457999999999999999998643
No 31
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.53 E-value=8.2e-15 Score=141.72 Aligned_cols=133 Identities=10% Similarity=-0.034 Sum_probs=90.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHH------------cCCCeeEeecCCCCCCCCC-Cc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALE------------RGIPAISAVMGTERLPFPG-IV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~e------------rgi~~~~~v~d~~~LPfpd-~s 453 (595)
++.+|||||||+|.++.+|+++ .|+|+|+++.++..++.+.... ....+.+.+.++..+++++ ++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 4789999999999999999985 7999999998887665332110 1235667788888898875 79
Q ss_pred eeEEEecccCcccccC---HHHHHHHHHHhccCCcEEEEEeCCCCC---cCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 454 FDAVHCARCRVPWHIE---GGKLLLELNRVLRPGGFFIWSATPVYQ---KLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 454 FDlV~~~~c~v~~h~d---~~~lL~El~RvLKPGG~Lvis~pp~~~---~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
||+|++..+ ++|.. ...++++++|+|||||++++.....-. ..+.....-..+..++.. ||+++....
T Consensus 102 fD~v~~~~~--l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~ 175 (203)
T 1pjz_A 102 CAAFYDRAA--MIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGG 175 (203)
T ss_dssp EEEEEEESC--GGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEE
T ss_pred EEEEEECcc--hhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEecc
Confidence 999998753 33332 357999999999999984443211100 000000012566777777 888665543
No 32
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.52 E-value=1.1e-13 Score=137.40 Aligned_cols=145 Identities=15% Similarity=0.104 Sum_probs=102.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..+ +++...+.+...+...+++ +++||+|+|....+.+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a-----~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~ 123 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIA-----RRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGH 123 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHH-----HHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGG
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHH-----HhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhh
Confidence 3689999999999999999986 689999997655444 4443356677788888887 6899999997523333
Q ss_pred cc---CHHHHHHHHHHhccCCcEEEEEeCCCCCc----------------------------------------------
Q 007641 467 HI---EGGKLLLELNRVLRPGGFFIWSATPVYQK---------------------------------------------- 497 (595)
Q Consensus 467 h~---d~~~lL~El~RvLKPGG~Lvis~pp~~~~---------------------------------------------- 497 (595)
.. +...+|.+++++|||||+|+|........
T Consensus 124 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (263)
T 3pfg_A 124 LAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGI 203 (263)
T ss_dssp SCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcE
Confidence 32 44689999999999999999962100000
Q ss_pred --Cc----hhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEEEeCCC
Q 007641 498 --LP----EDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYRKPTS 540 (595)
Q Consensus 498 --l~----e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~KP~~ 540 (595)
.. ........+..+++.+||+++..... ....++.+-+||..
T Consensus 204 ~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~-~~~~~~~va~K~a~ 251 (263)
T 3pfg_A 204 THHEESHRITLFTREQYERAFTAAGLSVEFMPGG-PSGRGLFTGLPGAK 251 (263)
T ss_dssp EEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST-TTSSCEEEEEECC-
T ss_pred EEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC-CCCceeEEEecCCC
Confidence 00 00001378999999999998887544 34556777787754
No 33
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=4.1e-13 Score=125.42 Aligned_cols=124 Identities=20% Similarity=0.187 Sum_probs=93.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..+ +.+...+.+...+...++++++.||+|++... +++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a-----~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~-~~~ 119 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYA-----KQDFPEARWVVGDLSVDQISETDFDLIVSAGN-VMG 119 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHCTTSEEEECCTTTSCCCCCCEEEEEECCC-CGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHH-----HHhCCCCcEEEcccccCCCCCCceeEEEECCc-HHh
Confidence 5789999999999999999885 789999997655444 33433456677777778888889999999732 334
Q ss_pred cc---CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 467 HI---EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 467 h~---d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
+. +...+|.++.++|+|||+|++..+..... ....+..++..+||.++....
T Consensus 120 ~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 120 FLAEDGREPALANIHRALGADGRAVIGFGAGRGW------VFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSC------CHHHHHHHHHHHTEEEEEEES
T ss_pred hcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCc------CHHHHHHHHHHcCCEEeeeec
Confidence 43 33789999999999999999986543221 135677888999999877643
No 34
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.52 E-value=5.4e-14 Score=141.55 Aligned_cols=135 Identities=16% Similarity=0.183 Sum_probs=99.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCC-CCCCceeEEEecccC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLP-FPGIVFDAVHCARCR 463 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LP-fpd~sFDlV~~~~c~ 463 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..++... ...++ .+.+...+...++ +++++||+|+|.. .
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~-~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAA-EAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA-V 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES-C
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc-h
Confidence 3679999999999999999986 7999999988877766443 33344 3556677777777 7889999999986 2
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEeCCCCC----------------cCch---------hHHHHHHHHHHHHHcCCE
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQ----------------KLPE---------DVEIWNAMSQLIKAMCWE 518 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~----------------~l~e---------~i~~w~~le~Lak~~Gw~ 518 (595)
+.+..++..+|.++.|+|||||+|++..+.... ..+. .......+..+++.+||.
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 225 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQ 225 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCc
Confidence 333447799999999999999999998642110 0000 000126788999999999
Q ss_pred EEEEeec
Q 007641 519 LVSISKD 525 (595)
Q Consensus 519 ~v~~~~~ 525 (595)
++.....
T Consensus 226 v~~~~~~ 232 (285)
T 4htf_A 226 IMGKTGV 232 (285)
T ss_dssp EEEEEEE
T ss_pred eeeeeeE
Confidence 8877543
No 35
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.52 E-value=9.2e-14 Score=128.73 Aligned_cols=138 Identities=15% Similarity=0.086 Sum_probs=96.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..+ +++...+.+...+ +++++++||+|++.. +++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a-----~~~~~~v~~~~~d---~~~~~~~~D~v~~~~--~l~ 86 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEV-----KEKFDSVITLSDP---KEIPDNSVDFILFAN--SFH 86 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHH-----HHHCTTSEEESSG---GGSCTTCEEEEEEES--CST
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHH-----HHhCCCcEEEeCC---CCCCCCceEEEEEcc--chh
Confidence 4779999999999999999886 799999997655444 3333344444444 888889999999986 334
Q ss_pred c-cCHHHHHHHHHHhccCCcEEEEEeCCCCC--cCchhH--HHHHHHHHHHHHcCCEEEEEeecccCceEEEEEEeCC
Q 007641 467 H-IEGGKLLLELNRVLRPGGFFIWSATPVYQ--KLPEDV--EIWNAMSQLIKAMCWELVSISKDTINKVGIAVYRKPT 539 (595)
Q Consensus 467 h-~d~~~lL~El~RvLKPGG~Lvis~pp~~~--~l~e~i--~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~KP~ 539 (595)
| .+...+|.++.|+|||||+|++....... ..+... .....+..+++ ||.++....... .....++.+..
T Consensus 87 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~-~~~~l~~~~~~ 161 (170)
T 3i9f_A 87 DMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTP-YHFGLVLKRKT 161 (170)
T ss_dssp TCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSST-TEEEEEEEECC
T ss_pred cccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCC-ceEEEEEecCC
Confidence 4 47899999999999999999998542211 001100 11256777777 999988766653 33444555443
No 36
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.51 E-value=8.9e-14 Score=133.30 Aligned_cols=128 Identities=18% Similarity=0.178 Sum_probs=91.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC---CCCC-CceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL---PFPG-IVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L---Pfpd-~sFDlV~~~~c 462 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++.. ++++ ....+...+...+ ++.. .+||+|+|..+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~-----a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDA-----ARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHH-----HHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHH-----HHHh-cccccchhhHHhhcccccccCCCccEEEECch
Confidence 4689999999999999999886 78999999765544 4444 2334444444444 5544 45999999873
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcC----------------ch-------hHHHHHHHHHHHHHcCCEE
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKL----------------PE-------DVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l----------------~e-------~i~~w~~le~Lak~~Gw~~ 519 (595)
+++.+...+|.+++|+|||||+|++..+...... .. .......+..+++.+||.+
T Consensus 126 --l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 203 (227)
T 3e8s_A 126 --LLHQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRL 203 (227)
T ss_dssp --CCSSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEE
T ss_pred --hhhhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeE
Confidence 3366889999999999999999999875321100 00 0012378888999999999
Q ss_pred EEEee
Q 007641 520 VSISK 524 (595)
Q Consensus 520 v~~~~ 524 (595)
+....
T Consensus 204 ~~~~~ 208 (227)
T 3e8s_A 204 VSLQE 208 (227)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 87654
No 37
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.51 E-value=1.2e-13 Score=136.20 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=96.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
.++.+|||||||+|.++..|+++ .|+|+|+++.++..+.... ......+.+...+...+|+++++||+|++.. .++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVH-LWH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEES-CGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECC-chh
Confidence 35789999999999999999885 7999999987766655333 1123346677777888999999999999986 344
Q ss_pred cccCHHHHHHHHHHhccCCcEEEEEeCCC---C-----CcCc-------------hhHHHHHHHHHHHHHcCCEEEEE
Q 007641 466 WHIEGGKLLLELNRVLRPGGFFIWSATPV---Y-----QKLP-------------EDVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 466 ~h~d~~~lL~El~RvLKPGG~Lvis~pp~---~-----~~l~-------------e~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
|..+...+|.++.|+|||||+|++..+.. . ..+. ........+..++..+||.++..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 44478999999999999999999872211 0 0000 00112256778899999996654
No 38
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.51 E-value=1.1e-13 Score=141.44 Aligned_cols=146 Identities=15% Similarity=0.109 Sum_probs=105.3
Q ss_pred CCCEEEEECCCCchhHHHHh--h---CCcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLF--D---RGVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La--~---r~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
++.+|||||||+|.++..|+ . ..|+++|+++.++..++.+. ...++. +.+...+...+|++ ++||+|++..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLA-AGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 57899999999999999985 2 27999999988877665433 333443 56777888888988 8999999976
Q ss_pred cCccccc-CHH---HHHHHHHHhccCCcEEEEEeCC-------CCCcC----ch-hH------------------HHHHH
Q 007641 462 CRVPWHI-EGG---KLLLELNRVLRPGGFFIWSATP-------VYQKL----PE-DV------------------EIWNA 507 (595)
Q Consensus 462 c~v~~h~-d~~---~lL~El~RvLKPGG~Lvis~pp-------~~~~l----~e-~i------------------~~w~~ 507 (595)
+.+|. ++. .+|.++.|+|||||+|++.... .+.+. .. .. .....
T Consensus 196 --~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 196 --LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp --SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred --hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 33443 554 4799999999999999998532 11111 00 00 12367
Q ss_pred HHHHHHHcCCEEEEEeecccCceEEEEEEeC
Q 007641 508 MSQLIKAMCWELVSISKDTINKVGIAVYRKP 538 (595)
Q Consensus 508 le~Lak~~Gw~~v~~~~~~l~~~giaI~~KP 538 (595)
+..+++.+||.++...........+.+.+||
T Consensus 274 ~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 8899999999999887655444556666765
No 39
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.51 E-value=1.5e-13 Score=138.96 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=89.5
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~ 446 (595)
.++.++...+..+ .++.+|||||||+|.++..|+++ .|+|+|+++.++..++... ...+..+.+.+.+...
T Consensus 8 ~~~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 8 DYVSFLVNTVWKI---TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELF-RLLPYDSEFLEGDATE 83 (284)
T ss_dssp HHHHHHHHTTSCC---CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHH-HSSSSEEEEEESCTTT
T ss_pred HHHHHHHHHHhcc---CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HhcCCceEEEEcchhh
Confidence 4556666655432 35789999999999999999874 6899999988877665333 3334456777788888
Q ss_pred CCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 447 LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
+|++ ++||+|++.. .+.+..+...+|.+++|+|||||+|++..+.
T Consensus 84 ~~~~-~~fD~v~~~~-~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 84 IELN-DKYDIAICHA-FLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CCCS-SCEEEEEEES-CGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCcC-CCeeEEEECC-hhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 8885 6999999986 2333447799999999999999999998775
No 40
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.50 E-value=2.3e-14 Score=152.59 Aligned_cols=154 Identities=12% Similarity=0.145 Sum_probs=108.5
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEee---cCCC
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAV---MGTE 445 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v---~d~~ 445 (595)
..+.+.+...+.. .++.+|||||||+|.++..|+++ .|+|+|+++.+ ++.|++++++..... .+..
T Consensus 93 ~~~~~~l~~~~~~----~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~-----~~~a~~~~~~~~~~~~~~~~~~ 163 (416)
T 4e2x_A 93 AMLARDFLATELT----GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGV-----AAKAREKGIRVRTDFFEKATAD 163 (416)
T ss_dssp HHHHHHHHHTTTC----SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHH-----HHHHHTTTCCEECSCCSHHHHH
T ss_pred HHHHHHHHHHhCC----CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHH-----HHHHHHcCCCcceeeechhhHh
Confidence 3444555444432 35789999999999999999986 78999998654 455666666654322 2245
Q ss_pred CCCCCCCceeEEEecccCccccc-CHHHHHHHHHHhccCCcEEEEEeCCC--------CC-cCchhH--HHHHHHHHHHH
Q 007641 446 RLPFPGIVFDAVHCARCRVPWHI-EGGKLLLELNRVLRPGGFFIWSATPV--------YQ-KLPEDV--EIWNAMSQLIK 513 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~c~v~~h~-d~~~lL~El~RvLKPGG~Lvis~pp~--------~~-~l~e~i--~~w~~le~Lak 513 (595)
.+|+++++||+|++.. +++|. ++..+|++++|+|||||+|++..+.. +. ....+. .....+..+++
T Consensus 164 ~l~~~~~~fD~I~~~~--vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 241 (416)
T 4e2x_A 164 DVRRTEGPANVIYAAN--TLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQ 241 (416)
T ss_dssp HHHHHHCCEEEEEEES--CGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHH
T ss_pred hcccCCCCEEEEEECC--hHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHH
Confidence 6678889999999987 44454 78999999999999999999986531 11 011111 11268889999
Q ss_pred HcCCEEEEEeecccCceEEEEE
Q 007641 514 AMCWELVSISKDTINKVGIAVY 535 (595)
Q Consensus 514 ~~Gw~~v~~~~~~l~~~giaI~ 535 (595)
.+||.++........++.+.+|
T Consensus 242 ~aGf~~~~~~~~~~~~g~l~~~ 263 (416)
T 4e2x_A 242 RCGFELVDVQRLPVHGGEVRYT 263 (416)
T ss_dssp HTTEEEEEEEEECGGGSEEEEE
T ss_pred HcCCEEEEEEEccCCCCEEEEE
Confidence 9999999887765555555555
No 41
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.50 E-value=2e-13 Score=131.43 Aligned_cols=126 Identities=18% Similarity=0.222 Sum_probs=96.1
Q ss_pred CCCEEEEECCCCchhHHHHhhCCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWHI 468 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~ 468 (595)
++.+|||||||+|.++..|+ ..|+++|+++. .+.+...+...+|+++++||+|++..+ +++.
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~--l~~~ 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLS--LMGT 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESC--CCSS
T ss_pred CCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehh--cccc
Confidence 46799999999999998885 68999999976 234566677778998899999999863 3456
Q ss_pred CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEEEeCC
Q 007641 469 EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYRKPT 539 (595)
Q Consensus 469 d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~KP~ 539 (595)
+...+|.++.++|+|||+|++........ ....+..+++.+||.++..... .....+.+++|..
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~~~-~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKIVSKDLT-NSHFFLFDFQKTG 192 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCS------CHHHHHHHHHHTTEEEEEEECC-STTCEEEEEEECS
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCC------CHHHHHHHHHHCCCEEEEEecC-CCeEEEEEEEecC
Confidence 78999999999999999999986432111 2357788899999998875432 2334566667654
No 42
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.50 E-value=1.1e-13 Score=146.62 Aligned_cols=134 Identities=20% Similarity=0.189 Sum_probs=99.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHc----C----CCeeEeecCCCCC------CC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALER----G----IPAISAVMGTERL------PF 449 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~er----g----i~~~~~v~d~~~L------Pf 449 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..++.+..... | ..+.+...+...+ |+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 5789999999999999888773 79999999888777664443221 3 3566677777776 99
Q ss_pred CCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhH----H----------HHHHHHHHHHHc
Q 007641 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDV----E----------IWNAMSQLIKAM 515 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i----~----------~w~~le~Lak~~ 515 (595)
++++||+|++.. .+++..+...+|.+++|+|||||+|++............. . .+..+..+++.+
T Consensus 163 ~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 163 PDSSVDIVISNC-VCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCEEEEEEcc-chhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 999999999986 3444457899999999999999999997543222211111 1 127888999999
Q ss_pred CCEEEEEe
Q 007641 516 CWELVSIS 523 (595)
Q Consensus 516 Gw~~v~~~ 523 (595)
||..+...
T Consensus 242 GF~~v~~~ 249 (383)
T 4fsd_A 242 GFRDVRLV 249 (383)
T ss_dssp TCCCEEEE
T ss_pred CCceEEEE
Confidence 99876543
No 43
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.49 E-value=1.3e-13 Score=138.77 Aligned_cols=143 Identities=14% Similarity=0.149 Sum_probs=99.0
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~ 446 (595)
..++.+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++... ...++ .+.+...+...
T Consensus 51 ~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~ 125 (287)
T 1kpg_A 51 AKIDLALGKLGL----QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLV-ANSENLRSKRVLLAGWEQ 125 (287)
T ss_dssp HHHHHHHTTTTC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTCCCCSCEEEEESCGGG
T ss_pred HHHHHHHHHcCC----CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCCCeEEEECChhh
Confidence 344445444432 35789999999999999999853 7999999988777665433 23343 35556666666
Q ss_pred CCCCCCceeEEEecccCccccc---CHHHHHHHHHHhccCCcEEEEEeCCCCCc-------Cc--h---hHH--------
Q 007641 447 LPFPGIVFDAVHCARCRVPWHI---EGGKLLLELNRVLRPGGFFIWSATPVYQK-------LP--E---DVE-------- 503 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~v~~h~---d~~~lL~El~RvLKPGG~Lvis~pp~~~~-------l~--e---~i~-------- 503 (595)
+| ++||+|++.. +++|. +...+|.++.|+|||||+|++..+..... .+ . ...
T Consensus 126 ~~---~~fD~v~~~~--~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (287)
T 1kpg_A 126 FD---EPVDRIVSIG--AFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIF 200 (287)
T ss_dssp CC---CCCSEEEEES--CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTS
T ss_pred CC---CCeeEEEEeC--chhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeC
Confidence 65 7899999987 44444 56899999999999999999975432110 00 0 000
Q ss_pred ------HHHHHHHHHHHcCCEEEEEee
Q 007641 504 ------IWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 504 ------~w~~le~Lak~~Gw~~v~~~~ 524 (595)
....+..+++.+||.++....
T Consensus 201 ~~~~~~s~~~~~~~l~~aGf~~~~~~~ 227 (287)
T 1kpg_A 201 PGGRLPSIPMVQECASANGFTVTRVQS 227 (287)
T ss_dssp TTCCCCCHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHhCCcEEEEEEe
Confidence 125777889999999887654
No 44
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.49 E-value=1.1e-13 Score=131.72 Aligned_cols=128 Identities=13% Similarity=0.129 Sum_probs=94.4
Q ss_pred EEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccccc-
Q 007641 392 VVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWHI- 468 (595)
Q Consensus 392 rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~- 468 (595)
+|||||||+|.++..|+++ .|+++|+++.++..++.... ..+..+.+...+...+++++++||+|++.. .+++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQ-EKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHH-HHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHH-hcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCCHH
Confidence 9999999999999999885 79999999988877764433 345566777777888888889999999964 33332
Q ss_pred CHHHHHHHHHHhccCCcEEEEEeCCCCCc-----Cch---hHHHHHHHHHHHHHcCCEEEEEee
Q 007641 469 EGGKLLLELNRVLRPGGFFIWSATPVYQK-----LPE---DVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 469 d~~~lL~El~RvLKPGG~Lvis~pp~~~~-----l~e---~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
+...+|.++.++|||||+|++..+..... .+. ....-..+..++. ||+++....
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEE
Confidence 45899999999999999999986432110 010 0011267777777 999887644
No 45
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.49 E-value=2.7e-13 Score=131.72 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=75.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..+ +++...+.+...+...+++ +++||+|+|....+++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a-----~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHA-----RKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHH-----HHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGG
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHH-----HHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhh
Confidence 4789999999999999999885 699999997765544 3343345667777777777 6789999975433433
Q ss_pred cc---CHHHHHHHHHHhccCCcEEEEEe
Q 007641 467 HI---EGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 467 h~---d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.. +...+|.+++++|||||+|++..
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 32 34789999999999999999974
No 46
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.49 E-value=1.1e-13 Score=140.67 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=79.5
Q ss_pred CCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcC----CCeeEeecCCCCCCCCCCceeEEEecccC
Q 007641 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG----IPAISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~erg----i~~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
..+|||||||+|.++..|+++ .|+++|+++.++..++.+.. ..+ ..+.+...+...+|+ +++||+|+|...
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~- 159 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLA-EAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG- 159 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHH-TSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH-
T ss_pred CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHh-hcccccccceEEEeCchhcCCc-CCCcCEEEECCc-
Confidence 459999999999999999986 79999999988877764432 333 456778888888887 689999998643
Q ss_pred cccccC---HHHHHHHHHHhccCCcEEEEEeC
Q 007641 464 VPWHIE---GGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 464 v~~h~d---~~~lL~El~RvLKPGG~Lvis~p 492 (595)
++++.+ ...+|.+++|+|||||+|+|..+
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 334444 37999999999999999999854
No 47
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.49 E-value=9.6e-14 Score=140.99 Aligned_cols=134 Identities=10% Similarity=0.075 Sum_probs=88.3
Q ss_pred CCCCEEEEECCCCchhHHHH----hhC--Cc----EEEeCCchhHHHHHHHHHHHcCCCee---EeecCCCCC------C
Q 007641 388 KRTRVVLDVGCGVASFGGFL----FDR--GV----LTMSFAPKDEHEAQVQFALERGIPAI---SAVMGTERL------P 448 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~L----a~r--~V----~giDisp~di~~aqvq~A~ergi~~~---~~v~d~~~L------P 448 (595)
.++.+|||||||+|.++..+ +.+ .+ +++|+++.|+..++.+.+...+++.+ +...+...+ +
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 35679999999999765433 321 33 99999999888776554433344432 223333333 3
Q ss_pred CCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCc-----------Cch----hHHHHHHHHHHHH
Q 007641 449 FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQK-----------LPE----DVEIWNAMSQLIK 513 (595)
Q Consensus 449 fpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~-----------l~e----~i~~w~~le~Lak 513 (595)
|++++||+|+|.. .++|..++..+|++++|+|||||+|++........ ++. ....-..+..++.
T Consensus 131 ~~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 131 KELQKWDFIHMIQ-MLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp TCCCCEEEEEEES-CGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred cCCCceeEEEEee-eeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 6789999999987 34444478999999999999999999874321000 000 0001256788999
Q ss_pred HcCCEEEEE
Q 007641 514 AMCWELVSI 522 (595)
Q Consensus 514 ~~Gw~~v~~ 522 (595)
.+||..+..
T Consensus 210 ~aGf~~~~~ 218 (292)
T 2aot_A 210 NLGLKYECY 218 (292)
T ss_dssp HHTCCEEEE
T ss_pred HCCCceEEE
Confidence 999987654
No 48
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=2e-13 Score=136.19 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=100.4
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
.+.+.+.+.+.. .++.+|||||||+|.++..|++. .|+|+|+++.++ ..++.+. .+.+...+...+|+
T Consensus 21 ~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~-~~~~~~~d~~~~~~ 90 (261)
T 3ege_A 21 RIVNAIINLLNL----PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMR-----QQAVVHP-QVEWFTGYAENLAL 90 (261)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHH-----HSSCCCT-TEEEECCCTTSCCS
T ss_pred HHHHHHHHHhCC----CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHH-----HHHHhcc-CCEEEECchhhCCC
Confidence 455666666542 35789999999999999999875 799999997544 3333333 56777788888999
Q ss_pred CCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCC--------CcCchhHH-------HHHHHHHHHHH
Q 007641 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVY--------QKLPEDVE-------IWNAMSQLIKA 514 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~--------~~l~e~i~-------~w~~le~Lak~ 514 (595)
++++||+|+|..+ +++..+...+|++++|+|| ||++++..+... ..++.... ....+. +++.
T Consensus 91 ~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 167 (261)
T 3ege_A 91 PDKSVDGVISILA-IHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQE 167 (261)
T ss_dssp CTTCBSEEEEESC-GGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHH
T ss_pred CCCCEeEEEEcch-HhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHH
Confidence 9999999999872 3333478999999999999 998877654311 11111111 125577 9999
Q ss_pred cCCEEEEEee
Q 007641 515 MCWELVSISK 524 (595)
Q Consensus 515 ~Gw~~v~~~~ 524 (595)
+||..+....
T Consensus 168 aGF~~v~~~~ 177 (261)
T 3ege_A 168 NTKRRVEAIP 177 (261)
T ss_dssp HHCSEEEEEE
T ss_pred cCCCceeEEE
Confidence 9998777644
No 49
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.48 E-value=2.6e-13 Score=133.61 Aligned_cols=99 Identities=18% Similarity=0.175 Sum_probs=79.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccC
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..+ +++...+.+...+...++ ++++||+|++.. .
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a-----~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~ 104 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKA-----ADRLPNTNFGKADLATWK-PAQKADLLYANA-V 104 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHH-----HHHSTTSEEEECCTTTCC-CSSCEEEEEEES-C
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHH-----HHhCCCcEEEECChhhcC-ccCCcCEEEEeC-c
Confidence 35789999999999999988874 799999997765444 333445667777788888 788999999986 3
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
++|..+...+|.+++|+|||||+|++..+.
T Consensus 105 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 105 FQWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GGGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hhhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 444447899999999999999999998753
No 50
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.48 E-value=1.7e-13 Score=132.32 Aligned_cols=143 Identities=14% Similarity=0.167 Sum_probs=96.7
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC------CeeEeec
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI------PAISAVM 442 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi------~~~~~v~ 442 (595)
....+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++.++. ..++ .+.+...
T Consensus 17 ~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 17 RMNGVVAALKQ----SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLD-RLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHT-TCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHh----cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHH-HhcCCcccCcceEEEeC
Confidence 34445554442 24679999999999999999874 69999999888777664432 2233 3566667
Q ss_pred CCCCCCCCCCceeEEEecccCcccccC-H--HHHHHHHHHhccCCcEEEEEeCCCC----CcCch------------hHH
Q 007641 443 GTERLPFPGIVFDAVHCARCRVPWHIE-G--GKLLLELNRVLRPGGFFIWSATPVY----QKLPE------------DVE 503 (595)
Q Consensus 443 d~~~LPfpd~sFDlV~~~~c~v~~h~d-~--~~lL~El~RvLKPGG~Lvis~pp~~----~~l~e------------~i~ 503 (595)
+...++++.++||+|+|.. +++|.. + ..+|+++.|+|||||+|+++....+ ..++. ...
T Consensus 92 d~~~~~~~~~~fD~v~~~~--~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (217)
T 3jwh_A 92 ALTYQDKRFHGYDAATVIE--VIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRS 169 (217)
T ss_dssp CTTSCCGGGCSCSEEEEES--CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHH
T ss_pred CcccccccCCCcCEEeeHH--HHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHH
Confidence 7777777778999999986 445553 3 6899999999999997776643211 00000 111
Q ss_pred HH-HHHHHHHHHcCCEEEEE
Q 007641 504 IW-NAMSQLIKAMCWELVSI 522 (595)
Q Consensus 504 ~w-~~le~Lak~~Gw~~v~~ 522 (595)
.+ .-+..+++..||.+...
T Consensus 170 ~l~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 170 QFQNWANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHHHHHcCceEEEE
Confidence 11 23448899999987554
No 51
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.48 E-value=8.6e-13 Score=128.45 Aligned_cols=112 Identities=19% Similarity=0.254 Sum_probs=84.7
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP 450 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfp 450 (595)
.+...+...++ ++.+|||||||+|.++..|+++ .|+++|+++.++..++.... ..+..+.+...+...++++
T Consensus 22 ~~~~~~~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~ 94 (243)
T 3d2l_A 22 EWVAWVLEQVE------PGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAM-ETNRHVDFWVQDMRELELP 94 (243)
T ss_dssp HHHHHHHHHSC------TTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHH-HTTCCCEEEECCGGGCCCS
T ss_pred HHHHHHHHHcC------CCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhh-hcCCceEEEEcChhhcCCC
Confidence 45555666554 3589999999999999999885 79999999988877764433 3445566777777778876
Q ss_pred CCceeEEEecccCcccc---cCHHHHHHHHHHhccCCcEEEEEe
Q 007641 451 GIVFDAVHCARCRVPWH---IEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 451 d~sFDlV~~~~c~v~~h---~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
++||+|++....+++. .+...+|.++.|+|||||+|++..
T Consensus 95 -~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 95 -EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp -SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 7899999864123322 134789999999999999999864
No 52
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.48 E-value=1.3e-13 Score=134.62 Aligned_cols=133 Identities=13% Similarity=0.075 Sum_probs=94.6
Q ss_pred CCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHc-CCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALER-GIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~er-gi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
..+|||||||+|.++..|+.. .|+|+|+++.++..++....... ...+.+...+...++ ++.+||+|++.. +++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~--~l~ 143 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYV--FFC 143 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEES--STT
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEECh--hhh
Confidence 459999999999999999875 78999999887766654432211 123556667777766 456999999976 333
Q ss_pred cc---CHHHHHHHHHHhccCCcEEEEEeCCCCCcCc--hhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 467 HI---EGGKLLLELNRVLRPGGFFIWSATPVYQKLP--EDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 467 h~---d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~--e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+. +...+|.++.|+|||||+|++...+...... ........+..++..+||.++.....
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 43 4589999999999999999987654321110 00012367888999999998776543
No 53
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.47 E-value=1.2e-13 Score=138.62 Aligned_cols=134 Identities=13% Similarity=0.116 Sum_probs=89.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHc-CC----------------------------C
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALER-GI----------------------------P 436 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~er-gi----------------------------~ 436 (595)
++.+|||||||+|.++..++.. .|+|+|+++.++..++....... .+ .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 5789999999999887766653 59999999999887764322110 00 0
Q ss_pred ee-EeecCCCC-CCCC---CCceeEEEecccCccccc-----CHHHHHHHHHHhccCCcEEEEEeCCC---CCcC----c
Q 007641 437 AI-SAVMGTER-LPFP---GIVFDAVHCARCRVPWHI-----EGGKLLLELNRVLRPGGFFIWSATPV---YQKL----P 499 (595)
Q Consensus 437 ~~-~~v~d~~~-LPfp---d~sFDlV~~~~c~v~~h~-----d~~~lL~El~RvLKPGG~Lvis~pp~---~~~l----~ 499 (595)
+. +..++... .|++ .++||+|+++.+ ++|. +...+|.+++|+|||||+|+++.... |... .
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~--l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLA--MECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESC--HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHH--HHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 11 45566544 3543 578999999873 3331 34689999999999999999985311 1000 0
Q ss_pred hhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 500 EDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 500 e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
.....-..+..++..+||.++....
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEEEee
Confidence 0000125788899999999877654
No 54
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.47 E-value=5.3e-13 Score=135.80 Aligned_cols=145 Identities=12% Similarity=0.171 Sum_probs=100.8
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCC
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~ 445 (595)
...++.+...+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++... ...++. +.+...+..
T Consensus 58 ~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~ 132 (302)
T 3hem_A 58 YAKRKLALDKLNL----EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMF-DEVDSPRRKEVRIQGWE 132 (302)
T ss_dssp HHHHHHHHHTTCC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH-HHSCCSSCEEEEECCGG
T ss_pred HHHHHHHHHHcCC----CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECCHH
Confidence 3444555555432 46789999999999999999885 7999999998887776443 344554 556666666
Q ss_pred CCCCCCCceeEEEecccCccccc-CH---------HHHHHHHHHhccCCcEEEEEeCCCCCcCc----------------
Q 007641 446 RLPFPGIVFDAVHCARCRVPWHI-EG---------GKLLLELNRVLRPGGFFIWSATPVYQKLP---------------- 499 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~c~v~~h~-d~---------~~lL~El~RvLKPGG~Lvis~pp~~~~l~---------------- 499 (595)
.+ +++||+|++.. +++|. ++ ..+|.++.|+|||||+|++..........
T Consensus 133 ~~---~~~fD~v~~~~--~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 3hem_A 133 EF---DEPVDRIVSLG--AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFI 207 (302)
T ss_dssp GC---CCCCSEEEEES--CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHH
T ss_pred Hc---CCCccEEEEcc--hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchH
Confidence 55 68999999986 33444 32 69999999999999999987542211000
Q ss_pred hhH----------HHHHHHHHHHHHcCCEEEEEeec
Q 007641 500 EDV----------EIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 500 e~i----------~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
.-+ ..-..+..+++.+||.++.....
T Consensus 208 ~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 208 KFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRI 243 (302)
T ss_dssp HHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 000 01146788899999998876543
No 55
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=3.4e-13 Score=130.75 Aligned_cols=125 Identities=17% Similarity=0.200 Sum_probs=93.2
Q ss_pred CCEEEEECCCCchhHHHHhhCCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcccccC
Q 007641 390 TRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWHIE 469 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~d 469 (595)
+.+|||||||+|.++..|+.+ +++|+++.++. .++.+ .+.+...+...+++++++||+|++.. .+.+..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~~-----~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSERMAE-----IARKR--GVFVLKGTAENLPLKDESFDFALMVT-TICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCHHHHH-----HHHHT--TCEEEECBTTBCCSCTTCEEEEEEES-CGGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCHHHHH-----HHHhc--CCEEEEcccccCCCCCCCeeEEEEcc-hHhhccC
Confidence 679999999999999999887 99999976554 44444 34556667778888889999999986 2333347
Q ss_pred HHHHHHHHHHhccCCcEEEEEeCCCCCcCc-------------h--hHHHHHHHHHHHHHcCCEEEEEee
Q 007641 470 GGKLLLELNRVLRPGGFFIWSATPVYQKLP-------------E--DVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 470 ~~~lL~El~RvLKPGG~Lvis~pp~~~~l~-------------e--~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
+..+|.++.++|+|||+|++..+....... . .......+..+++.+||.++....
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 789999999999999999998654221100 0 001236888999999999877643
No 56
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.47 E-value=4e-13 Score=130.80 Aligned_cols=107 Identities=21% Similarity=0.370 Sum_probs=81.8
Q ss_pred HHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCC
Q 007641 376 FIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFP 450 (595)
Q Consensus 376 ~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfp 450 (595)
.|...+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..+ +++.. .+.+...+...++++
T Consensus 34 ~l~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a-----~~~~~~~~~~~~~~d~~~~~~~ 104 (243)
T 3bkw_A 34 ALRAMLPE----VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARA-----RAAGPDTGITYERADLDKLHLP 104 (243)
T ss_dssp HHHHHSCC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHH-----HHTSCSSSEEEEECCGGGCCCC
T ss_pred HHHHhccc----cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHH-----HHhcccCCceEEEcChhhccCC
Confidence 35555543 35789999999999999999885 689999997655444 33322 355667777788888
Q ss_pred CCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 451 GIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 451 d~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+++||+|++.. .+++..+...+|.++.++|||||+|++..+
T Consensus 105 ~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 105 QDSFDLAYSSL-ALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp TTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCceEEEEec-cccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 89999999986 233334778999999999999999999753
No 57
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.46 E-value=7e-14 Score=140.74 Aligned_cols=134 Identities=13% Similarity=0.022 Sum_probs=90.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHH-----------------HcCCCeeEeecCCCCCCC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFAL-----------------ERGIPAISAVMGTERLPF 449 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~-----------------ergi~~~~~v~d~~~LPf 449 (595)
++.+|||||||+|.++.+|+++ .|+|+|+++.++..++.+... ..+..+.+.+.++..+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 5789999999999999999986 699999998887666433211 012456777888888887
Q ss_pred CC-CceeEEEecccCccccc-CHHHHHHHHHHhccCCcEEEEEeCCC--C-CcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 450 PG-IVFDAVHCARCRVPWHI-EGGKLLLELNRVLRPGGFFIWSATPV--Y-QKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 450 pd-~sFDlV~~~~c~v~~h~-d~~~lL~El~RvLKPGG~Lvis~pp~--~-~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
++ ++||+|++..++.+.+. +...++.++.|+|||||+|++..... . ...+...-.-..+..++.. +|+++...
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 64 89999998753322222 34689999999999999997542110 0 0000000012567777766 58876653
No 58
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.46 E-value=3.6e-13 Score=126.98 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=92.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.... ..++ .+.+...+...+++ +++||+|++.. ++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~--~l 107 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKS-IENLDNLHTRVVDLNNLTF-DRQYDFILSTV--VL 107 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEECCGGGCCC-CCCEEEEEEES--CG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHH-hCCCCCcEEEEcchhhCCC-CCCceEEEEcc--hh
Confidence 4679999999999999999885 79999999988877764443 3344 46667777788888 78999999986 33
Q ss_pred ccc---CHHHHHHHHHHhccCCcEEEEEeCCC---CCcCchhH--HHHHHHHHHHHHcCCEEEEEeec
Q 007641 466 WHI---EGGKLLLELNRVLRPGGFFIWSATPV---YQKLPEDV--EIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 466 ~h~---d~~~lL~El~RvLKPGG~Lvis~pp~---~~~l~e~i--~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+|. +...+|.++.|+|||||+|++..+.. +....... ..-..+..++.. |+++.....
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 444 45899999999999999988764311 11000000 011356666665 888876543
No 59
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=7.6e-13 Score=132.92 Aligned_cols=128 Identities=15% Similarity=0.190 Sum_probs=94.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++ .+...+.+...+...+|+ +++||+|++.. .++|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~-~l~~ 129 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKAR-----QNYPHLHFDVADARNFRV-DKPLDAVFSNA-MLHW 129 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHCTTSCEEECCTTTCCC-SSCEEEEEEES-CGGG
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHH-----hhCCCCEEEECChhhCCc-CCCcCEEEEcc-hhhh
Confidence 5789999999999999999874 7999999977655443 333345667777888887 57999999986 3444
Q ss_pred ccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhH-----------------------HHHHHHHHHHHHcCCEEEEEe
Q 007641 467 HIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDV-----------------------EIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 467 h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i-----------------------~~w~~le~Lak~~Gw~~v~~~ 523 (595)
..++..+|.+++|+|||||+|++..+.... ..... ..-..+..+++.+||.++...
T Consensus 130 ~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 130 VKEPEAAIASIHQALKSGGRFVAEFGGKGN-IKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAA 208 (279)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECTTT-THHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEE
T ss_pred CcCHHHHHHHHHHhcCCCcEEEEEecCCcc-hHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEE
Confidence 457899999999999999999997653211 00000 012567888999999987764
Q ss_pred e
Q 007641 524 K 524 (595)
Q Consensus 524 ~ 524 (595)
.
T Consensus 209 ~ 209 (279)
T 3ccf_A 209 L 209 (279)
T ss_dssp E
T ss_pred E
Confidence 3
No 60
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.45 E-value=2.3e-13 Score=136.19 Aligned_cols=154 Identities=12% Similarity=0.132 Sum_probs=101.6
Q ss_pred ccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEe
Q 007641 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISA 440 (595)
Q Consensus 366 F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~ 440 (595)
|...+..+...|..-+..+. .+++.+|||||||+|.++.+|++. .|+|+|+++.++..+.. .+..++ .+...
T Consensus 55 w~p~rsklaa~i~~gl~~l~-ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~-~a~~~~-ni~~V 131 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELP-VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLT-VVRDRR-NIFPI 131 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCC-CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHH-HSTTCT-TEEEE
T ss_pred ECCCchHHHHHHHhchhhcC-CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH-hhHhhc-CeeEE
Confidence 33444444555555444332 357999999999999999999984 69999999988766542 222222 23333
Q ss_pred ecCC---CCCCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCC-CcCchhHHHHHHHHHHHHHcC
Q 007641 441 VMGT---ERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVY-QKLPEDVEIWNAMSQLIKAMC 516 (595)
Q Consensus 441 v~d~---~~LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~-~~l~e~i~~w~~le~Lak~~G 516 (595)
..+. ..+++....||+|++. +.++.+...+|.++.|+|||||+|+|+....- .........+....+.++..|
T Consensus 132 ~~d~~~p~~~~~~~~~vDvVf~d---~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~G 208 (233)
T 4df3_A 132 LGDARFPEKYRHLVEGVDGLYAD---VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGG 208 (233)
T ss_dssp ESCTTCGGGGTTTCCCEEEEEEC---CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTT
T ss_pred EEeccCccccccccceEEEEEEe---ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCC
Confidence 3332 4567777899999875 34555678999999999999999998742110 000011123455566788899
Q ss_pred CEEEEEeec
Q 007641 517 WELVSISKD 525 (595)
Q Consensus 517 w~~v~~~~~ 525 (595)
|+++.....
T Consensus 209 F~l~e~i~L 217 (233)
T 4df3_A 209 LEIKDVVHL 217 (233)
T ss_dssp CCEEEEEEC
T ss_pred CEEEEEEcc
Confidence 998876544
No 61
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.45 E-value=8.2e-13 Score=126.39 Aligned_cols=135 Identities=14% Similarity=0.049 Sum_probs=97.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
++.+|||||||+|.++..|++. .|+++|+++.++..++.+. ...++. +.+...+... +.+++||+|++.. .
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~--~ 134 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENA-ALNGIYDIALQKTSLLA--DVDGKFDLIVANI--L 134 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHTTCCCCEEEESSTTT--TCCSCEEEEEEES--C
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEeccccc--cCCCCceEEEECC--c
Confidence 4789999999999999999885 6899999998887776443 334544 5556665544 3458999999975 2
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEEEeCCC
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYRKPTS 540 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~KP~~ 540 (595)
..+ ...+|.++.++|||||+|++..... .....+..+++..||..+..... ..+...+.++|..
T Consensus 135 ~~~--~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~~~Gf~~~~~~~~--~~w~~~~~~~~~~ 198 (205)
T 3grz_A 135 AEI--LLDLIPQLDSHLNEDGQVIFSGIDY--------LQLPKIEQALAENSFQIDLKMRA--GRWIGLAISRKHE 198 (205)
T ss_dssp HHH--HHHHGGGSGGGEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTEEEEEEEEE--TTEEEEEEEECC-
T ss_pred HHH--HHHHHHHHHHhcCCCCEEEEEecCc--------ccHHHHHHHHHHcCCceEEeecc--CCEEEEEEecccc
Confidence 222 4788999999999999999974321 12457788899999998876554 3455555554443
No 62
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.45 E-value=2.8e-13 Score=129.76 Aligned_cols=98 Identities=27% Similarity=0.317 Sum_probs=78.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC-CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h 467 (595)
++.+|||||||+|.++..| .. .|+++|+++.++..++ ++...+.+...+...+|+++++||+|++.. .+++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAVGR-----RRAPEATWVRAWGEALPFPGESFDVVLLFT-TLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHHHH-----HHCTTSEEECCCTTSCCSCSSCEEEEEEES-CTTTC
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHHHH-----HhCCCcEEEEcccccCCCCCCcEEEEEEcC-hhhhc
Confidence 5789999999999999888 55 7999999977655443 333345666777788999999999999986 23333
Q ss_pred cCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 468 IEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 468 ~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
.++..+|.++.|+|||||+|++..+.
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 47799999999999999999998754
No 63
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=1.2e-13 Score=136.97 Aligned_cols=146 Identities=14% Similarity=0.171 Sum_probs=96.5
Q ss_pred hHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC-
Q 007641 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE- 445 (595)
Q Consensus 370 a~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~- 445 (595)
...+...+.+.+.. ++.+|||||||+|.++.+|+++ .|++||+++.++..++. .+...+..+.+...+..
T Consensus 46 e~~~m~~~a~~~~~-----~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~-~~~~~~~~~~~~~~~a~~ 119 (236)
T 3orh_A 46 ETPYMHALAAAASS-----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWED 119 (236)
T ss_dssp GHHHHHHHHHHHTT-----TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHH
T ss_pred HHHHHHHHHHhhcc-----CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHH-HHhhCCCceEEEeehHHh
Confidence 34566666665543 6889999999999999999885 68999999887766653 33344555555555543
Q ss_pred -CCCCCCCceeEEEecc---cCccccc-CHHHHHHHHHHhccCCcEEEEEeCCC-----CCcCchhHHHH-HHHHHHHHH
Q 007641 446 -RLPFPGIVFDAVHCAR---CRVPWHI-EGGKLLLELNRVLRPGGFFIWSATPV-----YQKLPEDVEIW-NAMSQLIKA 514 (595)
Q Consensus 446 -~LPfpd~sFDlV~~~~---c~v~~h~-d~~~lL~El~RvLKPGG~Lvis~pp~-----~~~l~e~i~~w-~~le~Lak~ 514 (595)
..++++++||.|++.. ....+|. +...++.+++|+|||||+|++..... ..........+ ......+..
T Consensus 120 ~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~e 199 (236)
T 3orh_A 120 VAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLE 199 (236)
T ss_dssp HGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHH
T ss_pred hcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHH
Confidence 3467889999998632 1122333 56899999999999999998863110 01111111222 344556778
Q ss_pred cCCEEEE
Q 007641 515 MCWELVS 521 (595)
Q Consensus 515 ~Gw~~v~ 521 (595)
+||+...
T Consensus 200 aGF~~~~ 206 (236)
T 3orh_A 200 AGFRREN 206 (236)
T ss_dssp HTCCGGG
T ss_pred cCCeEEE
Confidence 8997543
No 64
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=4e-13 Score=136.49 Aligned_cols=112 Identities=14% Similarity=0.162 Sum_probs=87.4
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhh-----CCcEEEeCCchhHHHHHHHHHHH--cCCCeeEeecCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALE--RGIPAISAVMGT 444 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~-----r~V~giDisp~di~~aqvq~A~e--rgi~~~~~v~d~ 444 (595)
.+.+.|...+. .++.+|||||||+|.++..|++ ..|+|+|+++.++..++...... ....+.+...+.
T Consensus 24 ~~~~~l~~~~~-----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 98 (299)
T 3g5t_A 24 DFYKMIDEYHD-----GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS 98 (299)
T ss_dssp HHHHHHHHHCC-----SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT
T ss_pred HHHHHHHHHhc-----CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH
Confidence 34555555543 2578999999999999999994 27999999998887776544432 134567777888
Q ss_pred CCCCCCC------CceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 445 ERLPFPG------IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 445 ~~LPfpd------~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
..+++++ ++||+|+|.. +++|.+...+|.++.|+|||||+|++.
T Consensus 99 ~~~~~~~~~~~~~~~fD~V~~~~--~l~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 99 DDFKFLGADSVDKQKIDMITAVE--CAHWFDFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TCCGGGCTTTTTSSCEEEEEEES--CGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhCCccccccccCCCeeEEeHhh--HHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence 8888877 8999999986 334448899999999999999999883
No 65
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=1.6e-12 Score=125.67 Aligned_cols=127 Identities=14% Similarity=0.141 Sum_probs=95.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCC--CCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLP--FPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LP--fpd~sFDlV~~~~ 461 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.+.. ..++ .+.+...+...++ +++++||+|++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVL-EVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH-HHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHH-HcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 4779999999999999999874 69999999998877765443 3444 4556667777776 7788999999985
Q ss_pred cCccccc--------CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 462 CRVPWHI--------EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 462 c~v~~h~--------d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+ .+|.. ....+|.++.++|||||+|++.... ......+..++...||..+....+
T Consensus 120 ~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~d 182 (214)
T 1yzh_A 120 S-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN--------RGLFEYSLVSFSQYGMKLNGVWLD 182 (214)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC--------HHHHHHHHHHHHHHTCEEEEEESS
T ss_pred C-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC--------HHHHHHHHHHHHHCCCeeeecccc
Confidence 3 33322 1258999999999999999997532 123466777888889998766543
No 66
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=1.5e-13 Score=135.05 Aligned_cols=144 Identities=14% Similarity=0.131 Sum_probs=95.2
Q ss_pred hHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC
Q 007641 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (595)
Q Consensus 370 a~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~ 446 (595)
...++..+...++ .++.+|||||||+|.++..|+.. .|+++|+++.++..++.+ +...+..+.+...+...
T Consensus 46 ~~~~~~~l~~~~~-----~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~v~~~~~d~~~ 119 (236)
T 1zx0_A 46 ETPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDW-APRQTHKVIPLKGLWED 119 (236)
T ss_dssp GHHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHH-GGGCSSEEEEEESCHHH
T ss_pred HHHHHHHHHhhcC-----CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHH-HHhcCCCeEEEecCHHH
Confidence 3445555555443 25789999999999999999874 689999998887766543 23334455666677777
Q ss_pred C--CCCCCceeEEEe-cccCccc--cc-CHHHHHHHHHHhccCCcEEEEEeCCCC----C-cCchhHHHH-HHHHHHHHH
Q 007641 447 L--PFPGIVFDAVHC-ARCRVPW--HI-EGGKLLLELNRVLRPGGFFIWSATPVY----Q-KLPEDVEIW-NAMSQLIKA 514 (595)
Q Consensus 447 L--Pfpd~sFDlV~~-~~c~v~~--h~-d~~~lL~El~RvLKPGG~Lvis~pp~~----~-~l~e~i~~w-~~le~Lak~ 514 (595)
+ |+++++||+|++ ....... +. ....+|.+++|+|||||+|++.....+ . ........| ......+..
T Consensus 120 ~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (236)
T 1zx0_A 120 VAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLE 199 (236)
T ss_dssp HGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHH
T ss_pred hhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHH
Confidence 7 899999999999 4322111 11 234789999999999999998642111 0 011111122 344456788
Q ss_pred cCCEE
Q 007641 515 MCWEL 519 (595)
Q Consensus 515 ~Gw~~ 519 (595)
+||..
T Consensus 200 aGF~~ 204 (236)
T 1zx0_A 200 AGFRR 204 (236)
T ss_dssp TTCCG
T ss_pred CCCCC
Confidence 99974
No 67
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.44 E-value=1.8e-13 Score=131.54 Aligned_cols=100 Identities=16% Similarity=0.254 Sum_probs=78.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
.++.+|||||||+|.++..|+++ .|+++|+++.++..++..... ...+.+...+...++ ++++||+|+|.. ++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~-~~~~fD~v~~~~--~l 124 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR--WSHISWAATDILQFS-TAELFDLIVVAE--VL 124 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT--CSSEEEEECCTTTCC-CSCCEEEEEEES--CG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc--CCCeEEEEcchhhCC-CCCCccEEEEcc--HH
Confidence 35789999999999999999986 799999998776665533221 124567777777777 678999999986 44
Q ss_pred ccc-CH---HHHHHHHHHhccCCcEEEEEeC
Q 007641 466 WHI-EG---GKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 466 ~h~-d~---~~lL~El~RvLKPGG~Lvis~p 492 (595)
+|. ++ ..+|.++.|+|||||+|++..+
T Consensus 125 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 125 YYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 454 44 5779999999999999999764
No 68
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.43 E-value=4.9e-13 Score=127.30 Aligned_cols=117 Identities=24% Similarity=0.374 Sum_probs=85.0
Q ss_pred CchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC
Q 007641 368 NGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT 444 (595)
Q Consensus 368 ~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~ 444 (595)
.....+...|...+ .++.+|||||||+|.++..|+.+ .|+++|+++.++..++...+. ...+.+...+.
T Consensus 27 ~~~~~~~~~l~~~~------~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~ 98 (215)
T 2pxx_A 27 GDFSSFRALLEPEL------RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDV 98 (215)
T ss_dssp CCHHHHHHHHGGGC------CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCT
T ss_pred cCHHHHHHHHHHhc------CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcch
Confidence 33344555555544 24789999999999999999885 799999998877665533321 22456667777
Q ss_pred CCCCCCCCceeEEEecccCc--------ccc-----c-CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 445 ERLPFPGIVFDAVHCARCRV--------PWH-----I-EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 445 ~~LPfpd~sFDlV~~~~c~v--------~~h-----~-d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
..+++++++||+|++..++- +|. . +...+|.++.|+|||||+|++..+
T Consensus 99 ~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 99 RKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp TSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 88889889999999865221 111 1 347999999999999999999875
No 69
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.43 E-value=1.7e-13 Score=137.99 Aligned_cols=117 Identities=21% Similarity=0.215 Sum_probs=86.9
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcC----CCeeEeecCC
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG----IPAISAVMGT 444 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~erg----i~~~~~v~d~ 444 (595)
..+.+.|...+.. .++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.+...... ..+.+...+.
T Consensus 43 ~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~ 118 (293)
T 3thr_A 43 AEYKAWLLGLLRQ----HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG
T ss_pred HHHHHHHHHHhcc----cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh
Confidence 3455556655543 24689999999999999999986 799999999888777644322111 1234556666
Q ss_pred CCCC---CCCCceeEEEec-ccCcccccC-------HHHHHHHHHHhccCCcEEEEEeC
Q 007641 445 ERLP---FPGIVFDAVHCA-RCRVPWHIE-------GGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 445 ~~LP---fpd~sFDlV~~~-~c~v~~h~d-------~~~lL~El~RvLKPGG~Lvis~p 492 (595)
..++ +++++||+|+|. . .+++..+ ...+|.+++|+|||||+|++..+
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~-~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGN-SFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTT-CGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhCccccccCCCeEEEEEcCh-HHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 7777 888999999997 4 2333346 68999999999999999999854
No 70
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.43 E-value=3.7e-13 Score=137.30 Aligned_cols=135 Identities=19% Similarity=0.328 Sum_probs=90.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcC------------------------------
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERG------------------------------ 434 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~erg------------------------------ 434 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..|+........
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4789999999999999999885 799999998887776543221110
Q ss_pred ----------------------------CCeeEeecCCCCC-----CCCCCceeEEEecccCccc-cc-----CHHHHHH
Q 007641 435 ----------------------------IPAISAVMGTERL-----PFPGIVFDAVHCARCRVPW-HI-----EGGKLLL 475 (595)
Q Consensus 435 ----------------------------i~~~~~v~d~~~L-----Pfpd~sFDlV~~~~c~v~~-h~-----d~~~lL~ 475 (595)
..+.+...+.... ++..++||+|+|... +.| |+ ....+|+
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v-l~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL-TKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC-HHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH-HHHhhhcCCHHHHHHHHH
Confidence 1244555554332 367789999999862 222 21 4478999
Q ss_pred HHHHhccCCcEEEEEeCCC--CC---cCchhH-HHH-------HHHHHHHHH--cCCEEEEEee
Q 007641 476 ELNRVLRPGGFFIWSATPV--YQ---KLPEDV-EIW-------NAMSQLIKA--MCWELVSISK 524 (595)
Q Consensus 476 El~RvLKPGG~Lvis~pp~--~~---~l~e~i-~~w-------~~le~Lak~--~Gw~~v~~~~ 524 (595)
+++++|||||+|+|...+. |. .+...+ ..+ ..+..++.. +||..+....
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 9999999999999975442 11 111111 111 467778888 9997766543
No 71
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.43 E-value=3.4e-13 Score=139.18 Aligned_cols=135 Identities=10% Similarity=0.035 Sum_probs=92.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC-------eeEeecCC------CCC--CCC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP-------AISAVMGT------ERL--PFP 450 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~-------~~~~v~d~------~~L--Pfp 450 (595)
++.+|||||||+|..+..++.. .|+|+|+++.++..|+.+.. ..+.. +.+.+.+. ..| +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~-~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYN-KLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHH-hccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4789999999999766555543 69999999999988876543 33322 22334433 223 467
Q ss_pred CCceeEEEecccCcccc---cCHHHHHHHHHHhccCCcEEEEEeCCCC--------------C-----------------
Q 007641 451 GIVFDAVHCARCRVPWH---IEGGKLLLELNRVLRPGGFFIWSATPVY--------------Q----------------- 496 (595)
Q Consensus 451 d~sFDlV~~~~c~v~~h---~d~~~lL~El~RvLKPGG~Lvis~pp~~--------------~----------------- 496 (595)
+++||+|+|..+ +++. .+...+|++++|+|||||+|+++.+... .
T Consensus 127 ~~~FD~V~~~~~-lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 205 (302)
T 2vdw_A 127 FGKFNIIDWQFA-IHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADD 205 (302)
T ss_dssp SSCEEEEEEESC-GGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETT
T ss_pred CCCeeEEEECch-HHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccc
Confidence 789999999863 3322 2457999999999999999998865210 0
Q ss_pred ----cCchh--------HHHHHHHHHHHHHcCCEEEEEeec
Q 007641 497 ----KLPED--------VEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 497 ----~l~e~--------i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+.+.. .-.+..+..+++.+||.++.....
T Consensus 206 ~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 206 RIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp EEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred ccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 11111 112478999999999998877544
No 72
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.42 E-value=3.2e-13 Score=135.43 Aligned_cols=103 Identities=20% Similarity=0.225 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCC-CCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPF-PGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPf-pd~sFDlV~~~~c 462 (595)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++.+.. ..++ .+.+...+...+|+ ++++||+|+|..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRAR-NMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHH-TSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-hcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 5789999999999999888774 79999999988877664432 3333 35666777788888 6789999999863
Q ss_pred Cccc---cc-CHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 463 RVPW---HI-EGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 463 ~v~~---h~-d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
+++ +. +...+|.++.|+|||||+|++..+.
T Consensus 143 -l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 143 -FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp -GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 222 12 4579999999999999999998653
No 73
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.42 E-value=4.7e-13 Score=128.51 Aligned_cols=128 Identities=17% Similarity=0.256 Sum_probs=93.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC--CCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER--LPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~--LPfpd~sFDlV~~~~c~v 464 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++ ..++.+.. .+...+... +++++++||+|++.. +
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~-----~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~--~ 102 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAA-----EQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGD--V 102 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHH-----HHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEES--C
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHH-----HHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECC--h
Confidence 5789999999999999999885 789999997654 44444432 345555544 778889999999986 3
Q ss_pred cccc-CHHHHHHHHHHhccCCcEEEEEeCCCCC-------------cC------ch--hHHHHHHHHHHHHHcCCEEEEE
Q 007641 465 PWHI-EGGKLLLELNRVLRPGGFFIWSATPVYQ-------------KL------PE--DVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 465 ~~h~-d~~~lL~El~RvLKPGG~Lvis~pp~~~-------------~l------~e--~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
++|. ++..+|.++.++|+|||+|++..+.... .. +. .......+..+++.+||+++..
T Consensus 103 l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 182 (230)
T 3cc8_A 103 LEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKV 182 (230)
T ss_dssp GGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEE
Confidence 4444 7789999999999999999998654210 00 00 0012367889999999998876
Q ss_pred eec
Q 007641 523 SKD 525 (595)
Q Consensus 523 ~~~ 525 (595)
...
T Consensus 183 ~~~ 185 (230)
T 3cc8_A 183 DRV 185 (230)
T ss_dssp EEE
T ss_pred Eec
Confidence 543
No 74
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.42 E-value=9.5e-12 Score=120.85 Aligned_cols=144 Identities=15% Similarity=0.039 Sum_probs=100.6
Q ss_pred CCCEEEEECCC-CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC-CCCCCCCceeEEEecccC
Q 007641 389 RTRVVLDVGCG-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE-RLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 389 ~~~rVLDIGCG-tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~-~LPfpd~sFDlV~~~~c~ 463 (595)
++.+||||||| +|.++..|+.+ .|+|+|+++.++..++.+. ...++.+.+...+.. ..++++++||+|+++.++
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNI-ERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH-HHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHH-HHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 57899999999 99999988875 7999999999887776443 344556666776653 335667899999998643
Q ss_pred ccccc------------------CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 464 VPWHI------------------EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 464 v~~h~------------------d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+.... ....+|.++.++|||||+|++..+. .......+..+++..||.+......
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-------~~~~~~~~~~~l~~~g~~~~~~~~~ 206 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD-------KEKLLNVIKERGIKLGYSVKDIKFK 206 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES-------CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc-------cHhHHHHHHHHHHHcCCceEEEEec
Confidence 22110 0268999999999999999997542 1134567888899999987665433
Q ss_pred ccCce-EEEEEEeCCC
Q 007641 526 TINKV-GIAVYRKPTS 540 (595)
Q Consensus 526 ~l~~~-giaI~~KP~~ 540 (595)
..... .+.+|.|...
T Consensus 207 ~g~~~~~~l~f~~~~~ 222 (230)
T 3evz_A 207 VGTRWRHSLIFFKGIS 222 (230)
T ss_dssp CCC-CEEEEEEECCC-
T ss_pred CCCeEEEEEEEecccc
Confidence 22222 3555665543
No 75
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.41 E-value=5.7e-13 Score=126.98 Aligned_cols=101 Identities=19% Similarity=0.223 Sum_probs=79.4
Q ss_pred CCCEEEEECCCCchh-HHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASF-GGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~-a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||||||+|.+ ...++.. .|+++|+++.++..++.... ..+..+.+...+...+|+++++||+|++.. ++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~l 99 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSR-ENNFKLNISKGDIRKLPFKDESMSFVYSYG--TI 99 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHH-HHTCCCCEEECCTTSCCSCTTCEEEEEECS--CG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH-hcCCceEEEECchhhCCCCCCceeEEEEcC--hH
Confidence 468999999999987 4444443 79999999998877764433 344556677778888999889999999976 33
Q ss_pred ccc---CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 466 WHI---EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 466 ~h~---d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+|. +...+|.+++|+|||||+|++...
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 444 457999999999999999998854
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.41 E-value=4.6e-13 Score=137.02 Aligned_cols=143 Identities=11% Similarity=0.122 Sum_probs=99.1
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~ 446 (595)
..++.+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++... ...++. +.+...+...
T Consensus 77 ~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~ 151 (318)
T 2fk8_A 77 AKVDLNLDKLDL----KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVL-ASIDTNRSRQVLLQGWED 151 (318)
T ss_dssp HHHHHHHTTSCC----CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTSCCSSCEEEEESCGGG
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECChHH
Confidence 344445444432 35789999999999999999874 7999999988877665433 333432 5566666666
Q ss_pred CCCCCCceeEEEecccCccccc---CHHHHHHHHHHhccCCcEEEEEeCCCCCcCc----------------hhH-----
Q 007641 447 LPFPGIVFDAVHCARCRVPWHI---EGGKLLLELNRVLRPGGFFIWSATPVYQKLP----------------EDV----- 502 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~v~~h~---d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~----------------e~i----- 502 (595)
+| ++||+|++.. +++|. +...+|.++.|+|||||+|++..+....... ..+
T Consensus 152 ~~---~~fD~v~~~~--~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
T 2fk8_A 152 FA---EPVDRIVSIE--AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIF 226 (318)
T ss_dssp CC---CCCSEEEEES--CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTS
T ss_pred CC---CCcCEEEEeC--hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcC
Confidence 65 7899999986 44444 5689999999999999999998643221100 000
Q ss_pred -----HHHHHHHHHHHHcCCEEEEEee
Q 007641 503 -----EIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 503 -----~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
.....+..+++.+||.++....
T Consensus 227 ~~~~~~s~~~~~~~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 227 PGGRLPSTEMMVEHGEKAGFTVPEPLS 253 (318)
T ss_dssp TTCCCCCHHHHHHHHHHTTCBCCCCEE
T ss_pred CCCcCCCHHHHHHHHHhCCCEEEEEEe
Confidence 0125778889999999776543
No 77
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.41 E-value=4e-12 Score=125.42 Aligned_cols=124 Identities=16% Similarity=0.018 Sum_probs=93.0
Q ss_pred CCCEEEEECCCCchhHHHHhh----CCcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCC---CCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFP---GIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~----r~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfp---d~sFDlV~~~ 460 (595)
++.+|||||||+|.++..|+. ..|+++|+++.++..++... ...++ .+.+...+...++++ +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLS-EALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 467999999999999998884 27999999998887776443 34455 355666666677664 5789999996
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
. + .+...++..+.++|||||+|++.....+ ......+...++..||.++....
T Consensus 149 ~--~---~~~~~~l~~~~~~LkpgG~l~~~~g~~~------~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 149 A--V---ARLSVLSELCLPLVKKNGLFVALKAASA------EEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp C--C---SCHHHHHHHHGGGEEEEEEEEEEECC-C------HHHHHHHHHHHHHTTEEEEEEEE
T ss_pred c--c---CCHHHHHHHHHHhcCCCCEEEEEeCCCc------hHHHHHHHHHHHHcCCeEeEEEE
Confidence 4 2 3578999999999999999998743211 12345667788899999876643
No 78
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.41 E-value=1.6e-12 Score=126.64 Aligned_cols=125 Identities=13% Similarity=0.140 Sum_probs=92.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCC--CCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP--FPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LP--fpd~sFDlV~~~~ 461 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.+ +...++. +.+...++..++ +++++||.|++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~-~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQK-VKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH-HHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHH-HHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 4679999999999999999874 699999999988777644 3345554 556666666665 7788999999864
Q ss_pred cCcccccC--------HHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 462 CRVPWHIE--------GGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 462 c~v~~h~d--------~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
+ .+|... ...+|.++.|+|||||+|++.... ......+..++...||..+...
T Consensus 117 ~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~--------~~~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 117 S-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN--------RGLFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC--------HHHHHHHHHHHHHHTCEEEEEE
T ss_pred C-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC--------HHHHHHHHHHHHHCCCcccccc
Confidence 2 333321 368999999999999999997531 1234556667777899876543
No 79
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=1e-12 Score=130.86 Aligned_cols=99 Identities=28% Similarity=0.396 Sum_probs=79.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..++ .+... .+...+...+|+++++||+|++...+.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~-----~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAR-----EKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHH-----hhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 4789999999999999999886 6999999977655443 33222 26667778889989999999997633344
Q ss_pred ccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 467 HIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 467 h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
..++..+|.++.|+|||||+|++..+.
T Consensus 128 ~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 128 VENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 356899999999999999999998764
No 80
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.41 E-value=1.4e-11 Score=117.95 Aligned_cols=118 Identities=11% Similarity=0.020 Sum_probs=89.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCCCCCceeEEEeccc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..++.+... .+++ +.+...+..........||+|++...
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKK-FVARNVTLVEAFAPEGLDDLPDPDRVFIGGS 117 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHH-HTCTTEEEEECCTTTTCTTSCCCSEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEeCChhhhhhcCCCCCEEEECCC
Confidence 35789999999999999999885 599999999988777655443 3444 45555555443333367999999752
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCE
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWE 518 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~ 518 (595)
. + +...+|.++.++|||||+|++.... ......+..+++..||.
T Consensus 118 --~-~-~~~~~l~~~~~~LkpgG~l~~~~~~--------~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 118 --G-G-MLEEIIDAVDRRLKSEGVIVLNAVT--------LDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp --T-T-CHHHHHHHHHHHCCTTCEEEEEECB--------HHHHHHHHHHHHHTTCE
T ss_pred --C-c-CHHHHHHHHHHhcCCCeEEEEEecc--------cccHHHHHHHHHHCCCc
Confidence 2 1 6789999999999999999998642 23456788889999993
No 81
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.40 E-value=5.9e-12 Score=122.88 Aligned_cols=128 Identities=13% Similarity=0.135 Sum_probs=85.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC----CCCCCCceeEEEe
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER----LPFPGIVFDAVHC 459 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~----LPfpd~sFDlV~~ 459 (595)
.++.+|||||||+|.++..|+++ .|+|+|+++.++... ++.|+.+ ..+.+...+... .+++ ++||+|+|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~-~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKL-LELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHH-HHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHH-HHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 35789999999999999988873 699999999876433 3445544 234455555544 3555 78999998
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEeCCC---CCcCchhHHHH-HHHHHHHHHcCCEEEEEeec
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPV---YQKLPEDVEIW-NAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~---~~~l~e~i~~w-~~le~Lak~~Gw~~v~~~~~ 525 (595)
.. ..+.....+|.+++|+|||||+|++..+.. ....++ ..+ ..+.. ++.. |.++.....
T Consensus 133 ~~---~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~--~~~~~~~~~-l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 133 DI---AQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPE--EVFKSVLKE-MEGD-FKIVKHGSL 195 (210)
T ss_dssp CC---CSTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHH--HHHHHHHHH-HHTT-SEEEEEEEC
T ss_pred ec---cChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHH--HHHHHHHHH-HHhh-cEEeeeecC
Confidence 62 333234566999999999999999985321 111111 222 22333 6667 998887655
No 82
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.40 E-value=3.6e-12 Score=120.92 Aligned_cols=132 Identities=14% Similarity=0.074 Sum_probs=90.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCC-CCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLP-FPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LP-fpd~sFDlV~~~ 460 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..++... ...++ .+.+...+...++ +.+++||+|++.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKL-TDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHH-HHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 5789999999999999998875 7999999998887776544 34444 3556666666665 666899999997
Q ss_pred ccCcccc-------c-CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHH---HcCCEEEEEee
Q 007641 461 RCRVPWH-------I-EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIK---AMCWELVSISK 524 (595)
Q Consensus 461 ~c~v~~h-------~-d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak---~~Gw~~v~~~~ 524 (595)
.++++.. . +...+|.++.++|||||+|++.......... .....+..++. ..+|.+.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~v~~~~~ 172 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGF---EEKEKVLEFLKGVDQKKFIVQRTDF 172 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBS---HHHHHHHHHHTTSCTTTEEEEEEEE
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcH---HHHHHHHHHHHhCCCCcEEEEEEEe
Confidence 6442211 1 2357999999999999999988643222111 22334444443 44577665543
No 83
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.39 E-value=5.6e-12 Score=117.58 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=84.3
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC---eeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP---AISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~---~~~~v~d~~~ 446 (595)
.....+.+.+.. .++.+|||||||+|.++..++.+ .|+++|+++.++..++.... ..++. +.+...+...
T Consensus 39 ~~~~~l~~~~~~----~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVV----DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIK-LNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCC----CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHH-HTTCTTSCEEEEECSTTT
T ss_pred hHHHHHHHHccc----CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHH-HcCCCccceEEEECchhc
Confidence 344555555543 35789999999999999999875 79999999988877764443 34444 5556666544
Q ss_pred CCCCCCceeEEEecccCcccc-cCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 447 LPFPGIVFDAVHCARCRVPWH-IEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~v~~h-~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
+++++.||+|++..+ +++. .....+|.++.++|+|||+|++..+.
T Consensus 114 -~~~~~~~D~v~~~~~-~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 114 -NVKDRKYNKIITNPP-IRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp -TCTTSCEEEEEECCC-STTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred -ccccCCceEEEECCC-cccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 445678999999762 2221 24579999999999999999998653
No 84
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.38 E-value=6.1e-12 Score=116.62 Aligned_cols=121 Identities=15% Similarity=0.104 Sum_probs=88.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCC-CCCCCCCCceeEEEecc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGT-ERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~-~~LPfpd~sFDlV~~~~ 461 (595)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..++.+. ...+++ .++...+. ..++...++||+|++..
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNA-INLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHH-HTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHH-HHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 35779999999999999999875 6999999998877665433 344554 33444444 34444437899999976
Q ss_pred cCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEE
Q 007641 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 462 c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
...+ ..+|.++.++|||||+|++.... ......+..+++..|+.+...
T Consensus 103 --~~~~---~~~l~~~~~~L~~gG~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 103 --GLTA---PGVFAAAWKRLPVGGRLVANAVT--------VESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp ---TTC---TTHHHHHHHTCCTTCEEEEEECS--------HHHHHHHHHHHHHHCCEEEEE
T ss_pred --cccH---HHHHHHHHHhcCCCCEEEEEeec--------cccHHHHHHHHHHcCCeeEEE
Confidence 2333 68999999999999999987642 234456777888888876554
No 85
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.38 E-value=4.9e-12 Score=125.96 Aligned_cols=134 Identities=15% Similarity=0.191 Sum_probs=92.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCch------hHHHHHHHHHHHcCC--CeeEeecC---CCCCCCCC
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPK------DEHEAQVQFALERGI--PAISAVMG---TERLPFPG 451 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~------di~~aqvq~A~ergi--~~~~~v~d---~~~LPfpd 451 (595)
.++.+|||||||+|.++..|+.+ .|+|+|+++. ++..++.++. ..++ .+.+...+ ...+|+++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLL-AGPLGDRLTVHFNTNLSDDLGPIAD 120 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHH-TSTTGGGEEEECSCCTTTCCGGGTT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHH-hcCCCCceEEEECChhhhccCCCCC
Confidence 35789999999999999988873 6999999986 7776654433 3333 34555555 45678888
Q ss_pred CceeEEEecccCccccc-CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchh--------------------------HHH
Q 007641 452 IVFDAVHCARCRVPWHI-EGGKLLLELNRVLRPGGFFIWSATPVYQKLPED--------------------------VEI 504 (595)
Q Consensus 452 ~sFDlV~~~~c~v~~h~-d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~--------------------------i~~ 504 (595)
++||+|++.. +++|. ++..++..+.++|+|||+|++............ ...
T Consensus 121 ~~fD~v~~~~--~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 198 (275)
T 3bkx_A 121 QHFDRVVLAH--SLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLIT 198 (275)
T ss_dssp CCCSEEEEES--CGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCC
T ss_pred CCEEEEEEcc--chhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCC
Confidence 9999999986 34444 566677777777777999999753221110000 001
Q ss_pred HHHHHHHHHHcCCEEEEEee
Q 007641 505 WNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 505 w~~le~Lak~~Gw~~v~~~~ 524 (595)
-..+..+++.+||.++....
T Consensus 199 ~~~l~~~l~~aGf~~~~~~~ 218 (275)
T 3bkx_A 199 PDTLAQIAHDNTWTYTAGTI 218 (275)
T ss_dssp HHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHHCCCeeEEEEE
Confidence 14778889999999876643
No 86
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.38 E-value=1.4e-12 Score=128.50 Aligned_cols=136 Identities=13% Similarity=0.165 Sum_probs=92.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC------------------------------
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI------------------------------ 435 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi------------------------------ 435 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++..... .+.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKK-EPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTT-CTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhc-CCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 5679999999999999888874 789999998887766543321 110
Q ss_pred Ce-eEeecCCCCC-CCCC---CceeEEEecccCcc---cccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCc-h----hH
Q 007641 436 PA-ISAVMGTERL-PFPG---IVFDAVHCARCRVP---WHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLP-E----DV 502 (595)
Q Consensus 436 ~~-~~~v~d~~~L-Pfpd---~sFDlV~~~~c~v~---~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~-e----~i 502 (595)
.+ .+...+...+ ++++ ++||+|+|..++.+ +..+...+|.++.|+|||||+|++.......+.. . ..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 03 4566666554 3455 89999999863211 1124579999999999999999998632111000 0 00
Q ss_pred H--HHHHHHHHHHHcCCEEEEEeec
Q 007641 503 E--IWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 503 ~--~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
. .-..+..++..+||.++.....
T Consensus 215 ~~~~~~~~~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 215 LPLGWETVRDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEEEe
Confidence 0 1247888999999998877643
No 87
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.37 E-value=2.2e-12 Score=122.19 Aligned_cols=123 Identities=14% Similarity=0.032 Sum_probs=85.2
Q ss_pred CchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecC
Q 007641 368 NGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMG 443 (595)
Q Consensus 368 ~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d 443 (595)
.....+...+...+.... ..++.+|||+|||+|.++..++.+ .|+++|+++.++..++.+... .++ .+.+...+
T Consensus 24 p~~~~~~~~l~~~l~~~~-~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~v~~~~~d 101 (189)
T 3p9n_A 24 PTTDRVRESLFNIVTARR-DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEA-LGLSGATLRRGA 101 (189)
T ss_dssp --CHHHHHHHHHHHHHHS-CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHH-HTCSCEEEEESC
T ss_pred cCcHHHHHHHHHHHHhcc-CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHH-cCCCceEEEEcc
Confidence 333444444444443211 125789999999999999977774 599999999988887755443 344 45566666
Q ss_pred CCCCC--CCCCceeEEEecccCcccc-cCHHHHHHHHHH--hccCCcEEEEEeCC
Q 007641 444 TERLP--FPGIVFDAVHCARCRVPWH-IEGGKLLLELNR--VLRPGGFFIWSATP 493 (595)
Q Consensus 444 ~~~LP--fpd~sFDlV~~~~c~v~~h-~d~~~lL~El~R--vLKPGG~Lvis~pp 493 (595)
...++ +++++||+|++... +++. .+...++..+.+ +|+|||+|++..+.
T Consensus 102 ~~~~~~~~~~~~fD~i~~~~p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 102 VAAVVAAGTTSPVDLVLADPP-YNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHHCCSSCCSEEEECCC-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHhhccCCCccEEEECCC-CCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 55443 45689999999863 2221 346789999999 99999999998653
No 88
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.37 E-value=3.2e-12 Score=125.68 Aligned_cols=102 Identities=25% Similarity=0.276 Sum_probs=80.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..++.+. ...+..+.+...+...++++ ++||+|+|..+.+++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKA-KERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-HhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 4689999999999999999885 7999999999887776443 34456677777887778776 689999986433332
Q ss_pred cc--CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 467 HI--EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 467 h~--d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.. +...+|.++.++|||||+|++..+
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 21 347899999999999999998754
No 89
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.37 E-value=1.6e-11 Score=119.01 Aligned_cols=121 Identities=17% Similarity=0.074 Sum_probs=91.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEecccC
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
.++.+|||||||+|.++..|+++ .|+++|+++.++..++.+ +...+++ +.+...+..........||+|++...
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~-~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~- 131 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKN-IDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG- 131 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-
Confidence 35789999999999999999885 799999999888777644 4445655 55666666553222357999998751
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
.+.. ++.++.++|||||+|++.... ......+..+++..||.+....
T Consensus 132 ----~~~~-~l~~~~~~LkpgG~lv~~~~~--------~~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 132 ----GSQA-LYDRLWEWLAPGTRIVANAVT--------LESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp ----CCHH-HHHHHHHHSCTTCEEEEEECS--------HHHHHHHHHHHHHHCSEEEEEE
T ss_pred ----ccHH-HHHHHHHhcCCCcEEEEEecC--------cccHHHHHHHHHhCCCcEEEEE
Confidence 1456 999999999999999998642 2445677788888898876654
No 90
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.36 E-value=1e-11 Score=125.20 Aligned_cols=150 Identities=13% Similarity=0.101 Sum_probs=101.9
Q ss_pred hHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhh----CCcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCC
Q 007641 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGT 444 (595)
Q Consensus 370 a~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~----r~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~ 444 (595)
...+...+...+. .++.+|||||||+|.++..|+. ..|+++|+++.++..++.+.. ..+++ +.+...+.
T Consensus 95 te~l~~~~l~~~~-----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~-~~~~~~v~~~~~d~ 168 (276)
T 2b3t_A 95 TECLVEQALARLP-----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQ-HLAIKNIHILQSDW 168 (276)
T ss_dssp HHHHHHHHHHHSC-----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHH-HHTCCSEEEECCST
T ss_pred HHHHHHHHHHhcc-----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEEcch
Confidence 3445555555543 2467999999999999999985 379999999998877765543 34554 55555555
Q ss_pred CCCCCCCCceeEEEecccCccc-----------c-------------cCHHHHHHHHHHhccCCcEEEEEeCCCCCcCch
Q 007641 445 ERLPFPGIVFDAVHCARCRVPW-----------H-------------IEGGKLLLELNRVLRPGGFFIWSATPVYQKLPE 500 (595)
Q Consensus 445 ~~LPfpd~sFDlV~~~~c~v~~-----------h-------------~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e 500 (595)
.. +++.+.||+|+++.+++.. | .....++.++.++|||||+|++.....
T Consensus 169 ~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~------ 241 (276)
T 2b3t_A 169 FS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ------ 241 (276)
T ss_dssp TG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS------
T ss_pred hh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch------
Confidence 43 3446789999998644322 1 012578899999999999999975321
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEE
Q 007641 501 DVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVY 535 (595)
Q Consensus 501 ~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~ 535 (595)
....+..+++..||..+....+......+.+.
T Consensus 242 ---~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~ 273 (276)
T 2b3t_A 242 ---QGEAVRQAFILAGYHDVETCRDYGDNERVTLG 273 (276)
T ss_dssp ---CHHHHHHHHHHTTCTTCCEEECTTSSEEEEEE
T ss_pred ---HHHHHHHHHHHCCCcEEEEEecCCCCCcEEEE
Confidence 12467778889999876665554433344443
No 91
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.36 E-value=7.1e-12 Score=117.73 Aligned_cols=128 Identities=10% Similarity=0.030 Sum_probs=92.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC-CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h 467 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++.. ...+.+...+... ++++++||+|+++.++. +.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~-~~ 91 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNPPYV-PD 91 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECCCCB-TT
T ss_pred CCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECCCCc-cC
Confidence 4679999999999999999987 79999999776533 2234556666655 66778999999986432 21
Q ss_pred c---------CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEEE
Q 007641 468 I---------EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYR 536 (595)
Q Consensus 468 ~---------d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~ 536 (595)
. +...++.++.+.| |||+|++..+.. .....+..+++..||..+...........+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 92 TDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------NRPKEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp CCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------GCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred CccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------CCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 1 2357899999999 999999976321 1235778889999999877766654433333333
No 92
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.36 E-value=4.6e-12 Score=126.57 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=92.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCCC--CCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLP--FPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~LP--fpd~sFDlV~~~~ 461 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..++.++. ..++. +.+...+...++ ++.++||+|+++.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~-~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVA-YNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHH-HTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHH-HCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 5789999999999999999985 69999999998877765544 34443 566667766554 5678999999986
Q ss_pred cCccc---cc----------------CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEE
Q 007641 462 CRVPW---HI----------------EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 462 c~v~~---h~----------------d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
+++.. +. ....+|..+.++|||||+|++..++ .....+..+++..||.....
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---------~~~~~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP---------ERLLDIIDIMRKYRLEPKRI 198 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT---------TTHHHHHHHHHHTTEEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH---------HHHHHHHHHHHHCCCceEEE
Confidence 43322 11 1257999999999999999997643 22356777788899987665
Q ss_pred e
Q 007641 523 S 523 (595)
Q Consensus 523 ~ 523 (595)
.
T Consensus 199 ~ 199 (259)
T 3lpm_A 199 Q 199 (259)
T ss_dssp E
T ss_pred E
Confidence 4
No 93
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.35 E-value=6.1e-12 Score=122.84 Aligned_cols=116 Identities=18% Similarity=0.245 Sum_probs=89.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-CCCCCC-CCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-ERLPFP-GIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-~~LPfp-d~sFDlV~~~~c~v 464 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..+ +++...+.+...+. ..+|++ +++||+|++..
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a-----~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~--- 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLA-----RANAPHADVYEWNGKGELPAGLGAPFGLIVSRR--- 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHH-----HHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES---
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHH-----HHhCCCceEEEcchhhccCCcCCCCEEEEEeCC---
Confidence 4789999999999999999985 799999997765444 34444566777776 678888 89999999862
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+...+|.++.|+|||||+|+..... . ....+..++...||..+.....
T Consensus 120 ----~~~~~l~~~~~~LkpgG~l~~~~~~--~-------~~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 120 ----GPTSVILRLPELAAPDAHFLYVGPR--L-------NVPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp ----CCSGGGGGHHHHEEEEEEEEEEESS--S-------CCTHHHHHHHHTTCEEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEEEeCCc--C-------CHHHHHHHHHHCCCeEEEEEee
Confidence 4568899999999999999933211 1 1135777889999998876544
No 94
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.35 E-value=1.2e-12 Score=132.42 Aligned_cols=135 Identities=14% Similarity=0.163 Sum_probs=87.5
Q ss_pred CCCEEEEECCCCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHH----------------HcCC--------------
Q 007641 389 RTRVVLDVGCGVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFAL----------------ERGI-------------- 435 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~---r~V~giDisp~di~~aqvq~A~----------------ergi-------------- 435 (595)
++.+|||||||+|.++..++. ..|+|+|+++.++..++..... ..+.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 578999999999996554443 3799999999888766542211 0110
Q ss_pred CeeEeecCCCC-CCC-----CCCceeEEEecccCccc----ccCHHHHHHHHHHhccCCcEEEEEeCC---CCCcCc---
Q 007641 436 PAISAVMGTER-LPF-----PGIVFDAVHCARCRVPW----HIEGGKLLLELNRVLRPGGFFIWSATP---VYQKLP--- 499 (595)
Q Consensus 436 ~~~~~v~d~~~-LPf-----pd~sFDlV~~~~c~v~~----h~d~~~lL~El~RvLKPGG~Lvis~pp---~~~~l~--- 499 (595)
.+.+..+++.. +|+ ++++||+|+|+.+ +++ ..+...+|.+++|+|||||+|++.... .|....
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhh-hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 02234446655 664 4567999999863 333 125689999999999999999987421 110000
Q ss_pred -hhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 500 -EDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 500 -e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
.....-..+..++..+||.++....
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~~~ 255 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDLRT 255 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEeeE
Confidence 0001125788899999999877643
No 95
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.35 E-value=1.4e-12 Score=139.16 Aligned_cols=105 Identities=19% Similarity=0.155 Sum_probs=84.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.+. ...++.+.+...+...+++++++||+|+|+.+ +++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~-~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp-~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGL-EANALKAQALHSDVDEALTEEARFDIIVTNPP-FHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHH-HHTTCCCEEEECSTTTTSCTTCCEEEEEECCC-CCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HHcCCCeEEEEcchhhccccCCCeEEEEECCc-hhh
Confidence 4779999999999999999986 7999999999887776544 44566677778888777777789999999863 222
Q ss_pred -----ccCHHHHHHHHHHhccCCcEEEEEeCCCC
Q 007641 467 -----HIEGGKLLLELNRVLRPGGFFIWSATPVY 495 (595)
Q Consensus 467 -----h~d~~~lL~El~RvLKPGG~Lvis~pp~~ 495 (595)
......+|.++.++|||||+|+|...+..
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 11346899999999999999999876543
No 96
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.35 E-value=1.3e-11 Score=120.96 Aligned_cols=142 Identities=15% Similarity=0.125 Sum_probs=92.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC----CCCCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER----LPFPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~----LPfpd~sFDlV~~~ 460 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..+..+ +... ..+.+...+... ++++ .+||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~-~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~ 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDA-CAER-ENIIPILGDANKPQEYANIV-EKVDVIYED 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHH-TTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHH-hhcC-CCeEEEECCCCCcccccccC-ccEEEEEEe
Confidence 5789999999999999999874 599999998877665433 2222 345556666666 6776 789999943
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEeCC-CCCcCchhHHHH-HHHHHHHHHcCCEEEEEeecccC--ceEEEEEE
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP-VYQKLPEDVEIW-NAMSQLIKAMCWELVSISKDTIN--KVGIAVYR 536 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp-~~~~l~e~i~~w-~~le~Lak~~Gw~~v~~~~~~l~--~~giaI~~ 536 (595)
+........+|.++.|+|||||+|++...+ .....+.....+ ..+. ++...||..+........ ...+.+.+
T Consensus 151 ---~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 151 ---VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp ---CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEE
T ss_pred ---cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEE
Confidence 111111267899999999999999996321 111111111223 5666 888899998876544322 13344555
Q ss_pred e
Q 007641 537 K 537 (595)
Q Consensus 537 K 537 (595)
|
T Consensus 227 k 227 (230)
T 1fbn_A 227 W 227 (230)
T ss_dssp E
T ss_pred e
Confidence 4
No 97
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.35 E-value=3.7e-12 Score=128.22 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=80.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.. +...++.+.+...+...+++ +++||+|++.. +++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~--~~~ 195 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNET-KEKENLNISTALYDINAANI-QENYDFIVSTV--VFM 195 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCGGGCCC-CSCEEEEEECS--SGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHHcCCceEEEEeccccccc-cCCccEEEEcc--chh
Confidence 4789999999999999999986 789999999888777644 34456677778888887777 78999999986 444
Q ss_pred ccC---HHHHHHHHHHhccCCcEEEEEe
Q 007641 467 HIE---GGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 467 h~d---~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|.+ ...+|.++.++|||||+|++..
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 442 3689999999999999988764
No 98
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.34 E-value=5.2e-12 Score=121.92 Aligned_cols=133 Identities=20% Similarity=0.168 Sum_probs=92.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHH----HcCC-CeeEeecCCCCCCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFAL----ERGI-PAISAVMGTERLPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~----ergi-~~~~~v~d~~~LPfpd~sFDlV~~ 459 (595)
++.+|||||||+|.++..|+++ .|+|+|+++.++..+. +.|+ ..++ .+.+...+...+|++++. |.|+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~-~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS-AKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH-HHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 5789999999999999999885 6999999999886532 2222 2344 456677788889998777 88774
Q ss_pred cccCcc----cccCHHHHHHHHHHhccCCcEEEEEeCCC--C------CcCch-hHHHH-HHHHHHHHHcCCEEEEEe
Q 007641 460 ARCRVP----WHIEGGKLLLELNRVLRPGGFFIWSATPV--Y------QKLPE-DVEIW-NAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 460 ~~c~v~----~h~d~~~lL~El~RvLKPGG~Lvis~pp~--~------~~l~e-~i~~w-~~le~Lak~~Gw~~v~~~ 523 (595)
..+... +..++..+|.+++|+|||||+|++..... + ...+. ....+ ..+..++..+||.+....
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 331111 22345799999999999999999974211 1 11111 11122 448889999999977653
No 99
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.34 E-value=7e-13 Score=125.99 Aligned_cols=153 Identities=12% Similarity=-0.037 Sum_probs=89.0
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL 447 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L 447 (595)
.++..+.+.+.. ..++.+|||||||+|.++..|+.+ .|+++|+++.++..++.+... .++.+.+...+...
T Consensus 16 ~~~~~~~~~l~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~d~~~- 90 (215)
T 4dzr_A 16 VLVEEAIRFLKR---MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER-FGAVVDWAAADGIE- 90 (215)
T ss_dssp HHHHHHHHHHTT---CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHH-
T ss_pred HHHHHHHHHhhh---cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH-hCCceEEEEcchHh-
Confidence 344555555432 135789999999999999999885 799999999888776644332 23334444455443
Q ss_pred CCCC-----CceeEEEecccCccccc----C---------------------HHHHHHHHHHhccCCcEEEEEeCCCCCc
Q 007641 448 PFPG-----IVFDAVHCARCRVPWHI----E---------------------GGKLLLELNRVLRPGGFFIWSATPVYQK 497 (595)
Q Consensus 448 Pfpd-----~sFDlV~~~~c~v~~h~----d---------------------~~~lL~El~RvLKPGG~Lvis~pp~~~~ 497 (595)
++++ ++||+|+++.+++.... . ...+|.++.++|||||+|++...+..
T Consensus 91 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-- 168 (215)
T 4dzr_A 91 WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN-- 168 (215)
T ss_dssp HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS--
T ss_pred hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc--
Confidence 5554 89999999754322110 0 06788899999999999444433211
Q ss_pred CchhHHHHHHHHHHHH--HcCCEEEEEeecccCceEEEEEEe
Q 007641 498 LPEDVEIWNAMSQLIK--AMCWELVSISKDTINKVGIAVYRK 537 (595)
Q Consensus 498 l~e~i~~w~~le~Lak--~~Gw~~v~~~~~~l~~~giaI~~K 537 (595)
....+..++. ..||..+...........+.+.++
T Consensus 169 ------~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~ 204 (215)
T 4dzr_A 169 ------QADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTR 204 (215)
T ss_dssp ------CHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEE
T ss_pred ------cHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEE
Confidence 1346677788 889988777666554444555443
No 100
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.34 E-value=1.5e-11 Score=124.90 Aligned_cols=141 Identities=10% Similarity=0.116 Sum_probs=99.6
Q ss_pred ccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEe
Q 007641 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISA 440 (595)
Q Consensus 366 F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~ 440 (595)
|..........+...+. ++.+|||+|||+|.++..++.+ .|+|+|+++.++..++.+. ...++. +.+.
T Consensus 108 f~~~~~~~~~~l~~~~~------~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~-~~n~~~~~v~~~ 180 (278)
T 2frn_A 108 FSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENI-HLNKVEDRMSAY 180 (278)
T ss_dssp CCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHH-HHTTCTTTEEEE
T ss_pred EcCCcHHHHHHHHHhCC------CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEE
Confidence 44433333444544432 4789999999999999999884 4999999999888777544 344544 4566
Q ss_pred ecCCCCCCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEE
Q 007641 441 VMGTERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELV 520 (595)
Q Consensus 441 v~d~~~LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v 520 (595)
..+...++. .++||+|++... .....++.++.++|||||+|++.......... ......+...+...||...
T Consensus 181 ~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 181 NMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP--REPFETFKRITKEYGYDVE 252 (278)
T ss_dssp CSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT--TTTHHHHHHHHHHTTCEEE
T ss_pred ECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEeecccccc--ccHHHHHHHHHHHcCCeeE
Confidence 777777765 688999999652 23468899999999999999987542111111 1234677888999999876
Q ss_pred E
Q 007641 521 S 521 (595)
Q Consensus 521 ~ 521 (595)
.
T Consensus 253 ~ 253 (278)
T 2frn_A 253 K 253 (278)
T ss_dssp E
T ss_pred E
Confidence 5
No 101
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.34 E-value=1.1e-11 Score=124.28 Aligned_cols=123 Identities=15% Similarity=0.092 Sum_probs=91.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||||||+|.++..+++. .|+++|+++.++..++.+. ...++.+.+...+... +++.++||+|+++. +..
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~-~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~--~~~ 195 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANA-KRNGVRPRFLEGSLEA-ALPFGPFDLLVANL--YAE 195 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHH-HHTTCCCEEEESCHHH-HGGGCCEEEEEEEC--CHH
T ss_pred CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHH-HHcCCcEEEEECChhh-cCcCCCCCEEEECC--cHH
Confidence 4789999999999999988875 6999999999988877544 3445554455554433 24567899999864 221
Q ss_pred ccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 467 HIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 467 h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
....++.++.++|||||+|+++.... .....+..+++..||.++.....
T Consensus 196 --~~~~~l~~~~~~LkpgG~lils~~~~--------~~~~~v~~~l~~~Gf~~~~~~~~ 244 (254)
T 2nxc_A 196 --LHAALAPRYREALVPGGRALLTGILK--------DRAPLVREAMAGAGFRPLEEAAE 244 (254)
T ss_dssp --HHHHHHHHHHHHEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTCEEEEEEEE
T ss_pred --HHHHHHHHHHHHcCCCCEEEEEeecc--------CCHHHHHHHHHHCCCEEEEEecc
Confidence 24689999999999999999975321 12467788899999998876554
No 102
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=3.3e-11 Score=111.50 Aligned_cols=131 Identities=12% Similarity=0.104 Sum_probs=96.7
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCC
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERL 447 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~L 447 (595)
......+...+.. .++.+|||||||+|.++..|+.. .|+++|+++.++..++.+.. ..++ .+.+...+...
T Consensus 21 ~~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~d~~~- 94 (183)
T 2yxd_A 21 EEIRAVSIGKLNL----NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLA-KFNIKNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHHHCC----CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHH-HTTCCSEEEEESCHHH-
T ss_pred HHHHHHHHHHcCC----CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHH-HcCCCcEEEEECCccc-
Confidence 3445555555542 35779999999999999999874 79999999988877764443 3444 34555566544
Q ss_pred CCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEE
Q 007641 448 PFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 448 Pfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
+++++.||+|++..+ .+...+|.++.++ |||+|++..+. ......+..+++..||.+...
T Consensus 95 ~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~--------~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIV--------LENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESC--------HHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEecc--------cccHHHHHHHHHHcCCeEEEE
Confidence 666688999999863 4668999999999 99999998642 234567888899999876554
No 103
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.33 E-value=4.2e-11 Score=123.54 Aligned_cols=130 Identities=11% Similarity=0.130 Sum_probs=89.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEe-ecCCCCCC---CCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISA-VMGTERLP---FPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~-v~d~~~LP---fpd~sFDlV~~~~ 461 (595)
++.+|||||||||.|+..|+++ .|+|+|+++.|+..+. +....+... ..+...++ ++..+||+|+|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~-----r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKL-----RQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHH-----HTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHH-----HhCcccceecccCceecchhhCCCCCCCEEEEEe
Confidence 5789999999999999999885 6999999998876532 222222221 11222222 3445699999865
Q ss_pred cCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCch-----------hHH--HHHHHHHHHHHcCCEEEEEeeccc
Q 007641 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPE-----------DVE--IWNAMSQLIKAMCWELVSISKDTI 527 (595)
Q Consensus 462 c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e-----------~i~--~w~~le~Lak~~Gw~~v~~~~~~l 527 (595)
. ++ ....+|.+++|+|||||+|++...|-|...+. ..+ .-..+..++..+||.+.......+
T Consensus 160 s--f~--sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi 234 (291)
T 3hp7_A 160 S--FI--SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPI 234 (291)
T ss_dssp S--SS--CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSS
T ss_pred e--Hh--hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
Confidence 2 22 34789999999999999999986654432111 111 236777889999999887766554
No 104
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.33 E-value=1.5e-11 Score=120.36 Aligned_cols=131 Identities=14% Similarity=0.159 Sum_probs=89.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC---CCCCCCceeEEEe
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---LPFPGIVFDAVHC 459 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~---LPfpd~sFDlV~~ 459 (595)
.++.+|||||||+|.++..|+++ .|+++|+++.++..+. +.|+.+ ..+.+...+... +++.+++||+|++
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~-~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH-HHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH-HHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 35789999999999999999874 6999999987665443 445544 345556666554 5666789999999
Q ss_pred cccCcccccCH-HHHHHHHHHhccCCcEEEEEeCCCC-CcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 460 ARCRVPWHIEG-GKLLLELNRVLRPGGFFIWSATPVY-QKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 460 ~~c~v~~h~d~-~~lL~El~RvLKPGG~Lvis~pp~~-~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
..+ ..+. ..++.++.++|||||+|++...+.. .........+..-..++..+||.++....
T Consensus 154 ~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 216 (233)
T 2ipx_A 154 DVA----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLT 216 (233)
T ss_dssp CCC----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEE
T ss_pred cCC----CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEe
Confidence 642 2233 5668899999999999999754310 11111111222224778899999887543
No 105
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.32 E-value=2.4e-11 Score=119.59 Aligned_cols=124 Identities=16% Similarity=0.120 Sum_probs=94.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEecc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
.++.+|||+|||+|.++..|+++ .|+++|+++.++..++..+....+. .+.+...+...++++++.||+|++..
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 174 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDL 174 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECC
Confidence 35789999999999999888874 6999999998887776555443133 35566667777778888999999842
Q ss_pred cCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 462 c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
.++..+|.++.++|||||+|++..+. ......+...++..||..+.....
T Consensus 175 ------~~~~~~l~~~~~~L~~gG~l~~~~~~--------~~~~~~~~~~l~~~gf~~~~~~~~ 224 (258)
T 2pwy_A 175 ------MEPWKVLEKAALALKPDRFLVAYLPN--------ITQVLELVRAAEAHPFRLERVLEV 224 (258)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEESC--------HHHHHHHHHHHTTTTEEEEEEEEE
T ss_pred ------cCHHHHHHHHHHhCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCCceEEEEEe
Confidence 24568999999999999999998753 123456666777899987766443
No 106
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=2.5e-12 Score=126.18 Aligned_cols=99 Identities=14% Similarity=0.044 Sum_probs=74.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCC-----CceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPG-----IVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd-----~sFDlV~~~~ 461 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..++... ....+.+...+...+++.. ..||+|++..
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEEEEcc
Confidence 5789999999999999999885 7999999987765554322 2224566667766655432 2499999986
Q ss_pred cCccccc---CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 462 CRVPWHI---EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 462 c~v~~h~---d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+++|. +...+|.++.|+|||||+|+|...
T Consensus 133 --~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 133 --GFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp --SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred --hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 34444 457999999999999999888753
No 107
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.31 E-value=4.9e-11 Score=136.94 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=87.3
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHH-----cCCC-eeEe
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALE-----RGIP-AISA 440 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~e-----rgi~-~~~~ 440 (595)
..+..+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..|+.++... .+++ +.+.
T Consensus 708 qRle~LLelL~~----~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefi 783 (950)
T 3htx_A 708 QRVEYALKHIRE----SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLY 783 (950)
T ss_dssp HHHHHHHHHHHH----SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEE
T ss_pred HHHHHHHHHhcc----cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEE
Confidence 345555555543 25789999999999999999885 4899999998887776544332 1333 5667
Q ss_pred ecCCCCCCCCCCceeEEEecccCcccccCH---HHHHHHHHHhccCCcEEEEEeCC
Q 007641 441 VMGTERLPFPGIVFDAVHCARCRVPWHIEG---GKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 441 v~d~~~LPfpd~sFDlV~~~~c~v~~h~d~---~~lL~El~RvLKPGG~Lvis~pp 493 (595)
..++..++++++.||+|+|.. +++|+.. ..++.++.|+|||| +|+|+.+.
T Consensus 784 qGDa~dLp~~d~sFDlVV~~e--VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 784 DGSILEFDSRLHDVDIGTCLE--VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp ESCTTSCCTTSCSCCEEEEES--CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred ECchHhCCcccCCeeEEEEeC--chhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 777889999999999999976 5566653 35899999999999 88877653
No 108
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.31 E-value=4.5e-11 Score=123.44 Aligned_cols=131 Identities=15% Similarity=0.121 Sum_probs=93.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++..++..+. ..++ .+.+...+.. .++|. .||+|++..
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~- 243 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFL-DTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA- 243 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTT-SCCCC-SCSEEEEES-
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhh-hcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh-
Confidence 4689999999999999999874 5899999 888777664433 3443 3555666654 56665 899999987
Q ss_pred CcccccCH---HHHHHHHHHhccCCcEEEEEeCCCCCcCc---hhHH----------HHHHHHHHHHHcCCEEEEEeec
Q 007641 463 RVPWHIEG---GKLLLELNRVLRPGGFFIWSATPVYQKLP---EDVE----------IWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 463 ~v~~h~d~---~~lL~El~RvLKPGG~Lvis~pp~~~~l~---e~i~----------~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
++++.+. ..+|++++++|||||+|+|.........+ .+.. ....+..+++.+||..+.....
T Consensus 244 -vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 244 -VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPI 321 (332)
T ss_dssp -CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred -hhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEEC
Confidence 4444433 78999999999999999998653221111 0111 1257888999999999877654
No 109
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.31 E-value=2.8e-11 Score=121.26 Aligned_cols=125 Identities=17% Similarity=0.013 Sum_probs=92.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCCC---CCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFP---GIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPfp---d~sFDlV~~~ 460 (595)
++.+|||||||+|.++..|+.. .|+++|+++.++..++... ...++. +.+...+...+++. .++||+|++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAI-EVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 5789999999999999888863 7999999998887776443 344554 56666666666643 4789999996
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
. + .+...++..+.++|||||+|++.....+ ......+...++.+||.+......
T Consensus 159 a--~---~~~~~ll~~~~~~LkpgG~l~~~~g~~~------~~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 159 A--V---APLCVLSELLLPFLEVGGAAVAMKGPRV------EEELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp S--S---CCHHHHHHHHGGGEEEEEEEEEEECSCC------HHHHTTHHHHHHHHTEEEEEEEEE
T ss_pred C--c---CCHHHHHHHHHHHcCCCeEEEEEeCCCc------HHHHHHHHHHHHHcCCeEEEEEEe
Confidence 4 2 2457899999999999999998653211 133456667778889998776543
No 110
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.31 E-value=3.1e-11 Score=125.34 Aligned_cols=144 Identities=12% Similarity=0.163 Sum_probs=98.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCC-CCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLP-FPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LP-fpd~sFDlV~~~~ 461 (595)
...+|||||||+|.++..|+++ .++++|+ +.++..++... ...++ .+.+...+....+ ++...||+|++..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 179 RARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTI-HAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp TCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHH-HHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHH-HhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 3789999999999999999874 6889999 77776665443 33343 2556666665554 2345699999987
Q ss_pred cCcccccCH---HHHHHHHHHhccCCcEEEEEeCCCCCc--Cch-----hH-----------HHHHHHHHHHHHcCCEEE
Q 007641 462 CRVPWHIEG---GKLLLELNRVLRPGGFFIWSATPVYQK--LPE-----DV-----------EIWNAMSQLIKAMCWELV 520 (595)
Q Consensus 462 c~v~~h~d~---~~lL~El~RvLKPGG~Lvis~pp~~~~--l~e-----~i-----------~~w~~le~Lak~~Gw~~v 520 (595)
++++... ..+|++++++|||||+|+|........ .+. +. .....+..+++.+||.++
T Consensus 257 --vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 334 (352)
T 3mcz_A 257 --CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVG 334 (352)
T ss_dssp --CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred --ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCcee
Confidence 4444432 799999999999999999975322110 010 00 012568889999999998
Q ss_pred EEeecccCceEEEEEEeCC
Q 007641 521 SISKDTINKVGIAVYRKPT 539 (595)
Q Consensus 521 ~~~~~~l~~~giaI~~KP~ 539 (595)
.... ....+.+.+||.
T Consensus 335 ~~~~---g~~~l~~a~kp~ 350 (352)
T 3mcz_A 335 ERSI---GRYTLLIGQRSS 350 (352)
T ss_dssp EEEE---TTEEEEEEECCC
T ss_pred eecc---CceEEEEEecCC
Confidence 8532 334566667764
No 111
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.31 E-value=1.2e-11 Score=129.89 Aligned_cols=134 Identities=14% Similarity=0.078 Sum_probs=94.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCC--CCCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL--PFPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~L--Pfpd~sFDlV~~~ 460 (595)
...+|||||||+|.++..|+++ .++++|+ +.++..++... ...++ .+.+...+.... |+| +.||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQT-AGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHH-TTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHH-HhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 4689999999999999999873 6899999 77776665332 23343 355666666554 576 789999998
Q ss_pred ccCcccccCH---HHHHHHHHHhccCCcEEEEEeCCCCCcCchh---------------------HHHHHHHHHHHHHcC
Q 007641 461 RCRVPWHIEG---GKLLLELNRVLRPGGFFIWSATPVYQKLPED---------------------VEIWNAMSQLIKAMC 516 (595)
Q Consensus 461 ~c~v~~h~d~---~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~---------------------i~~w~~le~Lak~~G 516 (595)
. ++++... ..+|++++|+|||||+|+|............ ......+..+++.+|
T Consensus 256 ~--vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AG 333 (363)
T 3dp7_A 256 Q--FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAG 333 (363)
T ss_dssp S--CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTT
T ss_pred c--hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcC
Confidence 7 4444332 5889999999999999999864322111110 001267888999999
Q ss_pred CEEEEEeeccc
Q 007641 517 WELVSISKDTI 527 (595)
Q Consensus 517 w~~v~~~~~~l 527 (595)
|..+.......
T Consensus 334 f~~v~~~~~~g 344 (363)
T 3dp7_A 334 LEVEEIQDNIG 344 (363)
T ss_dssp EEESCCCCCBT
T ss_pred CeEEEEEeCCC
Confidence 99887765443
No 112
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.30 E-value=3.9e-12 Score=125.61 Aligned_cols=131 Identities=15% Similarity=0.194 Sum_probs=83.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCC-chhHHHH---HHHHHHHcCCC-eeEeecCCCCCCCC-CCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFA-PKDEHEA---QVQFALERGIP-AISAVMGTERLPFP-GIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDis-p~di~~a---qvq~A~ergi~-~~~~v~d~~~LPfp-d~sFDlV~ 458 (595)
++.+|||||||+|.++..|+.+ .|+|+|++ +.++..| + +.+...+++ +.+...+...+|.. ...||.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~-~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKII-KKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHT-SCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 5789999999999999999853 69999999 5554443 2 122234554 55666677777632 14566666
Q ss_pred ecccCcccc-------cCHHHHHHHHHHhccCCcEEEEEeCC--CCC-------cCchhHHHH---HHHHHHHHHcCCEE
Q 007641 459 CARCRVPWH-------IEGGKLLLELNRVLRPGGFFIWSATP--VYQ-------KLPEDVEIW---NAMSQLIKAMCWEL 519 (595)
Q Consensus 459 ~~~c~v~~h-------~d~~~lL~El~RvLKPGG~Lvis~pp--~~~-------~l~e~i~~w---~~le~Lak~~Gw~~ 519 (595)
+++ +|. .+...+|.+++|+|||||+|+|..+. .+. ..+.....| ..+..++..+||.+
T Consensus 103 ~~~---~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v 179 (225)
T 3p2e_A 103 ILF---PWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRI 179 (225)
T ss_dssp EES---CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEE
T ss_pred EeC---CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCe
Confidence 543 221 13357899999999999999993221 111 111111112 24888999999998
Q ss_pred EEEe
Q 007641 520 VSIS 523 (595)
Q Consensus 520 v~~~ 523 (595)
+...
T Consensus 180 ~~~~ 183 (225)
T 3p2e_A 180 DDVK 183 (225)
T ss_dssp EEEE
T ss_pred eeee
Confidence 7664
No 113
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.30 E-value=2.4e-12 Score=128.06 Aligned_cols=128 Identities=10% Similarity=0.057 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEe------ecCCCCCCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISA------VMGTERLPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~------v~d~~~LPfpd~sFDlV~~ 459 (595)
.+.+|||||||+|.++..|+++ .|+|+|+++.++..+. ++...+... ......++ ...||.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKI-----RSDERVVVMEQFNFRNAVLADFE--QGRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHH-----HTCTTEEEECSCCGGGCCGGGCC--SCCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHH-----HhCccccccccceEEEeCHhHcC--cCCCCEEEE
Confidence 4679999999999999999885 6999999999876543 222221111 01111222 112344443
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCch-----------hH--HHHHHHHHHHHHcCCEEEEEeecc
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPE-----------DV--EIWNAMSQLIKAMCWELVSISKDT 526 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e-----------~i--~~w~~le~Lak~~Gw~~v~~~~~~ 526 (595)
.. ++.+ ...+|.+++|+|||||+|++...|.+..... .. .....+..++..+||.++......
T Consensus 110 D~--v~~~--l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~p 185 (232)
T 3opn_A 110 DV--SFIS--LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSP 185 (232)
T ss_dssp CC--SSSC--GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECS
T ss_pred EE--Ehhh--HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEcc
Confidence 32 1111 2689999999999999999875443321111 11 233678889999999988776554
Q ss_pred c
Q 007641 527 I 527 (595)
Q Consensus 527 l 527 (595)
+
T Consensus 186 i 186 (232)
T 3opn_A 186 I 186 (232)
T ss_dssp S
T ss_pred C
Confidence 4
No 114
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.30 E-value=3.5e-12 Score=125.30 Aligned_cols=102 Identities=18% Similarity=0.210 Sum_probs=78.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCC-CC--CCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTER-LP--FPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~-LP--fpd~sFDlV~~~ 460 (595)
...+|||||||+|.++..|+.+ .|+|+|+++.++..++.+ +...++. +.+...++.. ++ +++++||+|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~-~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLAS-AHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH-HHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHH-HHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 4679999999999999999874 599999999988777644 4445554 5555566555 33 788999999987
Q ss_pred ccCcccccCH--------HHHHHHHHHhccCCcEEEEEeC
Q 007641 461 RCRVPWHIEG--------GKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 461 ~c~v~~h~d~--------~~lL~El~RvLKPGG~Lvis~p 492 (595)
++ .+|+... ..+|.++.|+|||||+|++...
T Consensus 113 ~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 113 FP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp SC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 52 3444322 2699999999999999999863
No 115
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.30 E-value=1.2e-11 Score=122.97 Aligned_cols=123 Identities=20% Similarity=0.178 Sum_probs=84.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHH-----HcCCC-eeEeecCCCC-CC--CCCCcee
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFAL-----ERGIP-AISAVMGTER-LP--FPGIVFD 455 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~-----ergi~-~~~~v~d~~~-LP--fpd~sFD 455 (595)
+..+|||||||+|.++..|+.+ .|+|+|+++.++..++.+... ..++. +.+...++.. ++ |++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 4678999999999999999875 699999999988877654432 12343 5566666665 66 7889999
Q ss_pred EEEecccCcccccC--------HHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcC-CEEE
Q 007641 456 AVHCARCRVPWHIE--------GGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMC-WELV 520 (595)
Q Consensus 456 lV~~~~c~v~~h~d--------~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~G-w~~v 520 (595)
+|++..+ .+|... ...+|.++.|+|||||+|++.... ......+...+...+ |..+
T Consensus 126 ~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~--------~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 126 KMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV--------LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESC--------HHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC--------HHHHHHHHHHHHHCCCcccc
Confidence 9998642 334221 147999999999999999987531 123344445555555 5533
No 116
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.29 E-value=1.2e-11 Score=126.57 Aligned_cols=103 Identities=20% Similarity=0.276 Sum_probs=78.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHc-------CCCeeEeecCCCCCC----CC--CC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALER-------GIPAISAVMGTERLP----FP--GI 452 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~er-------gi~~~~~v~d~~~LP----fp--d~ 452 (595)
+..+|||||||+|.++..|+.. .|+++|+++.++..++.+..... ...+.+...+...++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 4679999999999999999864 79999999998877775554331 123556677776665 54 45
Q ss_pred ceeEEEecccCcccc-c---CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 453 VFDAVHCARCRVPWH-I---EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 453 sFDlV~~~~c~v~~h-~---d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+||+|+|.. .++|. . +...+|.++.|+|||||+|+++.+
T Consensus 114 ~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQF-VCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEET-CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEec-chhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 899999986 34444 2 236999999999999999999865
No 117
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.29 E-value=6.1e-11 Score=124.87 Aligned_cols=130 Identities=13% Similarity=0.121 Sum_probs=93.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++..++..+. ..++ .+.+...+.. .++|. .||+|++..
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~- 276 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLT-GRGLADRCEILPGDFF-ETIPD-GADVYLIKH- 276 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTT-TCCCS-SCSEEEEES-
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhh-hcCcCCceEEeccCCC-CCCCC-CceEEEhhh-
Confidence 4789999999999999999884 6899999 887777764443 3343 3555566655 56665 899999987
Q ss_pred CcccccCH---HHHHHHHHHhccCCcEEEEEeCCCCCcCch-----hHH----------HHHHHHHHHHHcCCEEEEEee
Q 007641 463 RVPWHIEG---GKLLLELNRVLRPGGFFIWSATPVYQKLPE-----DVE----------IWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 463 ~v~~h~d~---~~lL~El~RvLKPGG~Lvis~pp~~~~l~e-----~i~----------~w~~le~Lak~~Gw~~v~~~~ 524 (595)
++++.+. ..+|++++++|||||+|+|........... ++. ....+..+++.+||+.+....
T Consensus 277 -vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 277 -VLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp -CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred -hhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 4444433 379999999999999999975432211110 011 125678899999999988765
No 118
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.29 E-value=5.3e-11 Score=124.32 Aligned_cols=142 Identities=14% Similarity=0.249 Sum_probs=98.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++..++.++. ..++. +.+...+...+|++. +|+|++..
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~--~D~v~~~~- 264 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA-EKGVADRMRGIAVDIYKESYPE--ADAVLFCR- 264 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH-HTTCTTTEEEEECCTTTSCCCC--CSEEEEES-
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH-hcCCCCCEEEEeCccccCCCCC--CCEEEEec-
Confidence 5789999999999999999874 6899999 988887765544 33432 566667777777765 39999987
Q ss_pred CcccccC---HHHHHHHHHHhccCCcEEEEEeCCCCCc-Cc------------h-hH-----HHHHHHHHHHHHcCCEEE
Q 007641 463 RVPWHIE---GGKLLLELNRVLRPGGFFIWSATPVYQK-LP------------E-DV-----EIWNAMSQLIKAMCWELV 520 (595)
Q Consensus 463 ~v~~h~d---~~~lL~El~RvLKPGG~Lvis~pp~~~~-l~------------e-~i-----~~w~~le~Lak~~Gw~~v 520 (595)
++++.. ...+|++++++|||||+|+|........ .+ . .. .....+..+++.+||..+
T Consensus 265 -vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v 343 (359)
T 1x19_A 265 -ILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDV 343 (359)
T ss_dssp -CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEE
T ss_pred -hhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceE
Confidence 444443 4789999999999999998875321100 00 0 00 112567788999999988
Q ss_pred EEeecccCceEEEEEEeC
Q 007641 521 SISKDTINKVGIAVYRKP 538 (595)
Q Consensus 521 ~~~~~~l~~~giaI~~KP 538 (595)
...... ...+.+.+||
T Consensus 344 ~~~~~~--~~~vi~a~kp 359 (359)
T 1x19_A 344 TMVRKY--DHLLVQAVKP 359 (359)
T ss_dssp EEEEET--TEEEEEEECC
T ss_pred EEEecC--CceEEEEeCC
Confidence 876543 3334444443
No 119
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.28 E-value=8.9e-12 Score=116.44 Aligned_cols=131 Identities=12% Similarity=0.007 Sum_probs=89.4
Q ss_pred eeecCCCCccccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHH
Q 007641 356 YLTFPGGGTQFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALE 432 (595)
Q Consensus 356 ~~~Fpggg~~F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~e 432 (595)
.+.++.+. .+......+.+.+...+..+ .++.+|||+|||+|.++..++.+ .|+++|+++.++..++.+...
T Consensus 15 ~~~~~~~~-~~rp~~~~~~~~~~~~l~~~---~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~- 89 (187)
T 2fhp_A 15 RLKALDGD-NTRPTTDKVKESIFNMIGPY---FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAI- 89 (187)
T ss_dssp BCCCCCCC-SSCCCCHHHHHHHHHHHCSC---CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH-
T ss_pred cccCCCCC-CcCcCHHHHHHHHHHHHHhh---cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHH-
Confidence 34444332 34445556666666665421 24779999999999999988774 699999999988877655443
Q ss_pred cCC--CeeEeecCCCC----CCCCCCceeEEEecccCcccccCHHHHHHHH--HHhccCCcEEEEEeCC
Q 007641 433 RGI--PAISAVMGTER----LPFPGIVFDAVHCARCRVPWHIEGGKLLLEL--NRVLRPGGFFIWSATP 493 (595)
Q Consensus 433 rgi--~~~~~v~d~~~----LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El--~RvLKPGG~Lvis~pp 493 (595)
.++ .+.+...+... +++.+..||+|++..+ ........++..+ .|+|+|||+|++..+.
T Consensus 90 ~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~--~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 90 TKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP--YAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp HTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC--GGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred hCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC--CCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 343 24556666433 2233678999999863 2233556777777 8999999999998654
No 120
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.28 E-value=4.1e-11 Score=111.49 Aligned_cols=118 Identities=18% Similarity=0.237 Sum_probs=87.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCC-CceeEEEeccc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPG-IVFDAVHCARC 462 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd-~sFDlV~~~~c 462 (595)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++.+.. ..++ .+.+...+... +++. ..||+|++..
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~- 108 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQ-RHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGG- 108 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH-HTTCCTTEEEEESCHHH-HHTTSCCEEEEEESC-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHH-HcCCCcceEEEecCHHH-hcccCCCCCEEEECC-
Confidence 35789999999999999999885 79999999988877764443 3444 34455555433 2333 5899999975
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEE
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
... +...+|..+.++|+|||+|++..+. ......+..+++..||.+
T Consensus 109 -~~~--~~~~~l~~~~~~l~~gG~l~~~~~~--------~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 109 -SGG--ELQEILRIIKDKLKPGGRIIVTAIL--------LETKFEAMECLRDLGFDV 154 (192)
T ss_dssp -CTT--CHHHHHHHHHHTEEEEEEEEEEECB--------HHHHHHHHHHHHHTTCCC
T ss_pred -chH--HHHHHHHHHHHhcCCCcEEEEEecC--------cchHHHHHHHHHHCCCce
Confidence 222 4579999999999999999998642 234567788889999943
No 121
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.28 E-value=1.5e-11 Score=124.05 Aligned_cols=120 Identities=11% Similarity=0.138 Sum_probs=90.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHc-CCC-eeEeecCCCCCCCCCCceeEEEec
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALER-GIP-AISAVMGTERLPFPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~er-gi~-~~~~v~d~~~LPfpd~sFDlV~~~ 460 (595)
.++.+|||+|||+|.++..|++. .|+++|+++.++..++.... .. +.+ +.+...+... +++++.||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLS-EFYDIGNVRTSRSDIAD-FISDQMYDAVIAD 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHH-TTSCCTTEEEECSCTTT-CCCSCCEEEEEEC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHH-hcCCCCcEEEEECchhc-cCcCCCccEEEEc
Confidence 46789999999999999888764 69999999988777664443 33 443 4555555554 6777899999983
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
. .++..+|.++.++|||||+|++..+.. .....+...+...||..+...
T Consensus 187 ~------~~~~~~l~~~~~~LkpgG~l~i~~~~~--------~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 187 I------PDPWNHVQKIASMMKPGSVATFYLPNF--------DQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp C------SCGGGSHHHHHHTEEEEEEEEEEESSH--------HHHHHHHHHSGGGTEEEEEEE
T ss_pred C------cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCeEEEEE
Confidence 2 255689999999999999999987541 234566677788999877653
No 122
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.28 E-value=6.3e-11 Score=121.64 Aligned_cols=132 Identities=14% Similarity=0.151 Sum_probs=95.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
+..+|||||||+|.++..|+++ .++++|++ .++..++..+.. .++. +.+...+....+++.+ ||+|++..
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~- 240 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARI-QGVASRYHTIAGSAFEVDYGND-YDLVLLPN- 240 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHH-HTCGGGEEEEESCTTTSCCCSC-EEEEEEES-
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHh-cCCCcceEEEecccccCCCCCC-CcEEEEcc-
Confidence 5789999999999999999875 69999998 877777654433 3432 5566677766677655 99999986
Q ss_pred CcccccC---HHHHHHHHHHhccCCcEEEEEeCCCCCc--CchhH----------------HHHHHHHHHHHHcCCEEEE
Q 007641 463 RVPWHIE---GGKLLLELNRVLRPGGFFIWSATPVYQK--LPEDV----------------EIWNAMSQLIKAMCWELVS 521 (595)
Q Consensus 463 ~v~~h~d---~~~lL~El~RvLKPGG~Lvis~pp~~~~--l~e~i----------------~~w~~le~Lak~~Gw~~v~ 521 (595)
++++.. ...+|++++++|+|||+|+|..+..... .+... .....+..+++.+||..+.
T Consensus 241 -~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~ 319 (335)
T 2r3s_A 241 -FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQ 319 (335)
T ss_dssp -CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEE
T ss_pred -hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeee
Confidence 444442 2699999999999999999886533211 11100 0125778889999999887
Q ss_pred Eeec
Q 007641 522 ISKD 525 (595)
Q Consensus 522 ~~~~ 525 (595)
....
T Consensus 320 ~~~~ 323 (335)
T 2r3s_A 320 LHSL 323 (335)
T ss_dssp EECC
T ss_pred EEEC
Confidence 7544
No 123
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.28 E-value=1.6e-11 Score=117.13 Aligned_cols=117 Identities=15% Similarity=0.036 Sum_probs=85.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCCCCCceeEEEecccC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
++.+|||||||+|.++..|+.. .|+++|+++.++..++... ...++. +.+...+...++ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQ-HELKLENIEPVQSRVEEFP-SEPPFDGVISRA-- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHTTCSSEEEEECCTTTSC-CCSCEEEEECSC--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCCeEEEecchhhCC-ccCCcCEEEEec--
Confidence 3679999999999999988863 7999999998887776443 344554 556666666655 457899999864
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
+ .+...++..+.++|+|||+|++...+.. -..+..++. ||..+...
T Consensus 141 ~---~~~~~~l~~~~~~L~~gG~l~~~~~~~~---------~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 141 F---ASLNDMVSWCHHLPGEQGRFYALKGQMP---------EDEIALLPE--EYQVESVV 186 (207)
T ss_dssp S---SSHHHHHHHHTTSEEEEEEEEEEESSCC---------HHHHHTSCT--TEEEEEEE
T ss_pred c---CCHHHHHHHHHHhcCCCcEEEEEeCCCc---------hHHHHHHhc--CCceeeee
Confidence 2 2467999999999999999999854211 123444443 89887643
No 124
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.28 E-value=4.8e-11 Score=119.21 Aligned_cols=145 Identities=13% Similarity=0.099 Sum_probs=93.2
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~ 446 (595)
.....|...+..+. ..++.+|||||||+|.++.+|++. .|+++|+++.++.. .++.+..+ ..+.+...|+..
T Consensus 60 kla~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~-l~~~a~~r-~nv~~i~~Da~~ 136 (232)
T 3id6_C 60 KLAGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRE-LLLVAQRR-PNIFPLLADARF 136 (232)
T ss_dssp HHHHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHH-HHHHHHHC-TTEEEEECCTTC
T ss_pred HHHHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHH-HHHHhhhc-CCeEEEEccccc
Confidence 44455555554322 346899999999999999999874 69999999987643 23445444 345566666543
Q ss_pred CC---CCCCceeEEEecccCcccccCHH-HHHHHHHHhccCCcEEEEEeCCCC-C--cCchhHHHHHHHHHHHHHcCCEE
Q 007641 447 LP---FPGIVFDAVHCARCRVPWHIEGG-KLLLELNRVLRPGGFFIWSATPVY-Q--KLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 447 LP---fpd~sFDlV~~~~c~v~~h~d~~-~lL~El~RvLKPGG~Lvis~pp~~-~--~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
.. .....||+|++... +.+.. .++..+.++|||||+|+++..+.. . ..++ +.+......++..||++
T Consensus 137 ~~~~~~~~~~~D~I~~d~a----~~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~--e~~~~~~~~L~~~gf~~ 210 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIA----QPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPK--EIYKTEVEKLENSNFET 210 (232)
T ss_dssp GGGTTTTCCCEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSS--SSTTHHHHHHHHTTEEE
T ss_pred chhhhccccceEEEEecCC----ChhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHH--HHHHHHHHHHHHCCCEE
Confidence 22 12468999998741 13444 445566779999999999853211 1 1111 12345566777889998
Q ss_pred EEEeec
Q 007641 520 VSISKD 525 (595)
Q Consensus 520 v~~~~~ 525 (595)
+.....
T Consensus 211 ~~~~~l 216 (232)
T 3id6_C 211 IQIINL 216 (232)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 887654
No 125
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.27 E-value=1.9e-11 Score=121.72 Aligned_cols=92 Identities=27% Similarity=0.420 Sum_probs=74.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++ +.|++++..+.+...+...+|+++++||+|++.. .
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~ 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAI-----KAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIY--A 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHH-----HHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEES--C
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHH-----HHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeC--C
Confidence 5789999999999999999875 689999997654 4445555556677777888999999999999865 2
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
. .+|.++.|+|||||+|++..+.
T Consensus 158 ~------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 158 P------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp C------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred h------hhHHHHHHhcCCCcEEEEEEcC
Confidence 2 3589999999999999998653
No 126
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.27 E-value=1.3e-10 Score=121.52 Aligned_cols=131 Identities=21% Similarity=0.170 Sum_probs=90.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++..++.++. ..++ .+.+...+... +++. .||+|++..
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~- 256 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFA-DAGLADRVTVAEGDFFK-PLPV-TADVVLLSF- 256 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTTS-CCSC-CEEEEEEES-
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHH-hcCCCCceEEEeCCCCC-cCCC-CCCEEEEec-
Confidence 5789999999999999999874 6899999 888877764443 3344 35556666543 4443 399999987
Q ss_pred CcccccCH---HHHHHHHHHhccCCcEEEEEeC--CCCCcCchh------HH----------HHHHHHHHHHHcCCEEEE
Q 007641 463 RVPWHIEG---GKLLLELNRVLRPGGFFIWSAT--PVYQKLPED------VE----------IWNAMSQLIKAMCWELVS 521 (595)
Q Consensus 463 ~v~~h~d~---~~lL~El~RvLKPGG~Lvis~p--p~~~~l~e~------i~----------~w~~le~Lak~~Gw~~v~ 521 (595)
++++... ..+|++++++|||||+|+|... ......... .. ....+..+++.+||..+.
T Consensus 257 -vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 335 (374)
T 1qzz_A 257 -VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALAS 335 (374)
T ss_dssp -CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEE
T ss_pred -cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 4444433 4899999999999999998765 211110000 00 125677889999999887
Q ss_pred Eeec
Q 007641 522 ISKD 525 (595)
Q Consensus 522 ~~~~ 525 (595)
....
T Consensus 336 ~~~~ 339 (374)
T 1qzz_A 336 ERTS 339 (374)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 7654
No 127
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.27 E-value=1.8e-11 Score=128.51 Aligned_cols=100 Identities=17% Similarity=0.184 Sum_probs=79.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEeccc-
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARC- 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~~c- 462 (595)
++.+|||||||+|.++..|+++ .|+|+|+++ ++..++ +.+...++. +.+...+...+++++++||+|++...
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV-KIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH-HHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 4789999999999999999986 799999995 776665 344455554 67777888889999899999999641
Q ss_pred -CcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 463 -RVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 463 -~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
.+++......+|.++.|+|||||+|++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 1222235689999999999999999844
No 128
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.26 E-value=5.6e-11 Score=114.63 Aligned_cols=149 Identities=12% Similarity=0.049 Sum_probs=96.8
Q ss_pred hHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCC
Q 007641 370 ALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTE 445 (595)
Q Consensus 370 a~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~ 445 (595)
...+...+...+... .++.+|||+|||+|.++..++.+ .|+++|+++.++..++.+. ...++ .+.+...+..
T Consensus 38 ~~~~~~~l~~~l~~~---~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~-~~~~~~~v~~~~~D~~ 113 (202)
T 2fpo_A 38 TDRVRETLFNWLAPV---IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNL-ATLKAGNARVVNSNAM 113 (202)
T ss_dssp CHHHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHH-HHTTCCSEEEECSCHH
T ss_pred HHHHHHHHHHHHHhh---cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHH-HHcCCCcEEEEECCHH
Confidence 344444454444321 13679999999999999987664 6999999999988777444 34454 4556666654
Q ss_pred C-CCCCCCceeEEEecccCcccccCHHHHHHHHHH--hccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEE
Q 007641 446 R-LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNR--VLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 446 ~-LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~R--vLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
. +++..++||+|++... ++ ......++..+.+ +|+|||+|++...+.... +. ...+|..+..
T Consensus 114 ~~~~~~~~~fD~V~~~~p-~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~~-~~------------~~~~~~~~~~ 178 (202)
T 2fpo_A 114 SFLAQKGTPHNIVFVDPP-FR-RGLLEETINLLEDNGWLADEALIYVESEVENGL-PT------------VPANWSLHRE 178 (202)
T ss_dssp HHHSSCCCCEEEEEECCS-SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGCS-CC------------CCTTEEEEEE
T ss_pred HHHhhcCCCCCEEEECCC-CC-CCcHHHHHHHHHhcCccCCCcEEEEEECCCccc-cc------------cCCcceEEee
Confidence 4 5666788999999763 12 2345678888865 699999999886543221 11 0136776554
Q ss_pred eecccCceEEEEEEeCC
Q 007641 523 SKDTINKVGIAVYRKPT 539 (595)
Q Consensus 523 ~~~~l~~~giaI~~KP~ 539 (595)
.. +....+.+|++..
T Consensus 179 ~~--~g~~~~~~~~~~~ 193 (202)
T 2fpo_A 179 KV--AGQVAYRLYQREA 193 (202)
T ss_dssp EE--ETTEEEEEEEECC
T ss_pred ec--cCCEEEEEEEECC
Confidence 33 2345577777543
No 129
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.26 E-value=2.7e-11 Score=115.97 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=80.3
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP 448 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LP 448 (595)
.....+...+.. .++.+|||||||+|.++..|+.. .|+++|+++.++..++.++. ..++. +.+...+....+
T Consensus 64 ~~~~~~~~~l~~----~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 64 YMVARMTELLEL----TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLK-NLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCceEEEECCcccCC
Confidence 334445555432 35789999999999999999884 79999999988877765443 33444 556666666666
Q ss_pred CCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 449 FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 449 fpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
.+.++||+|++.. ..++.. ..+.++|||||+|++..++
T Consensus 139 ~~~~~~D~i~~~~--~~~~~~-----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QARAPFDAIIVTA--APPEIP-----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCEEEEEESS--BCSSCC-----THHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEEcc--chhhhh-----HHHHHhcccCcEEEEEEcC
Confidence 6678999999975 333332 2689999999999998764
No 130
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.26 E-value=7.1e-11 Score=116.62 Aligned_cols=122 Identities=12% Similarity=0.116 Sum_probs=91.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEec
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERLPFPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~ 460 (595)
.++.+|||+|||+|.++..|+.+ .|+++|+++.++..++..+. ..+++ +.+...+.. .++++++||+|++.
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~-~~~~~~~~D~v~~~ 169 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIK-WAGFDDRVTIKLKDIY-EGIEEENVDHVILD 169 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH-HHTCTTTEEEECSCGG-GCCCCCSEEEEEEC
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHH-HcCCCCceEEEECchh-hccCCCCcCEEEEC
Confidence 45789999999999999988875 68999999988877765443 33443 455555554 34777889999985
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcC--CEEEEEeec
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMC--WELVSISKD 525 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~G--w~~v~~~~~ 525 (595)
. .++..+|.++.++|||||+|++..+. ......+..+++..| |..+.....
T Consensus 170 ~------~~~~~~l~~~~~~L~~gG~l~~~~~~--------~~~~~~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 170 L------PQPERVVEHAAKALKPGGFFVAYTPC--------SNQVMRLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp S------SCGGGGHHHHHHHEEEEEEEEEEESS--------HHHHHHHHHHHHHTGGGBSCCEEECC
T ss_pred C------CCHHHHHHHHHHHcCCCCEEEEEECC--------HHHHHHHHHHHHHcCCCccccEEEEE
Confidence 3 24568899999999999999998653 234566777888899 887665443
No 131
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.26 E-value=1e-11 Score=119.69 Aligned_cols=133 Identities=14% Similarity=0.085 Sum_probs=89.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC---CeeEeecCCCCC-C-CCCCc-eeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI---PAISAVMGTERL-P-FPGIV-FDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi---~~~~~v~d~~~L-P-fpd~s-FDlV~~ 459 (595)
++.+|||+|||+|.++..++.+ .|+++|+++.++..++.+.. ..++ .+.+...+...+ + +++++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQ-TLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHH-HTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH-HhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 3679999999999999987664 69999999998888775543 4454 455666665443 3 24678 999999
Q ss_pred cccCcccccCHHHHHHHH--HHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEEEe
Q 007641 460 ARCRVPWHIEGGKLLLEL--NRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYRK 537 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El--~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~K 537 (595)
... + .......++..+ .|+|||||+|++...+.. ++.. ..+|..+..+.. ....+.+|++
T Consensus 132 ~~~-~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~--~~~~------------~~~~~~~~~~~y--G~~~~~~~~~ 193 (201)
T 2ift_A 132 DPP-F-HFNLAEQAISLLCENNWLKPNALIYVETEKDK--PLIT------------PENWTLLKEKTT--GIVSYRLYQN 193 (201)
T ss_dssp CCC-S-SSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS--CCCC------------CTTEEEEEEEEE--TTEEEEEEEE
T ss_pred CCC-C-CCccHHHHHHHHHhcCccCCCcEEEEEECCCC--Cccc------------cchhHHHHHHhc--CCEEEEEEec
Confidence 863 1 222457788888 778999999999865433 2211 136776654432 3445666665
Q ss_pred CCC
Q 007641 538 PTS 540 (595)
Q Consensus 538 P~~ 540 (595)
-..
T Consensus 194 ~~~ 196 (201)
T 2ift_A 194 LEH 196 (201)
T ss_dssp CC-
T ss_pred chh
Confidence 443
No 132
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.25 E-value=3.6e-11 Score=125.80 Aligned_cols=110 Identities=22% Similarity=0.180 Sum_probs=81.8
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCC
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL 447 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~L 447 (595)
|.+.|.+.+.. .++.+|||||||+|.++..++++ .|+|+|+++ ++..++.. +...++ .+.+...+...+
T Consensus 52 ~~~~i~~~~~~----~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~-~~~~~~~~~i~~~~~d~~~~ 125 (340)
T 2fyt_A 52 YRDFIYQNPHI----FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDI-IRLNKLEDTITLIKGKIEEV 125 (340)
T ss_dssp HHHHHHHCGGG----TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHH-HHHTTCTTTEEEEESCTTTS
T ss_pred HHHHHHhhhhh----cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHH-HHHcCCCCcEEEEEeeHHHh
Confidence 44555555432 35789999999999999999885 699999996 77666533 344444 456677778888
Q ss_pred CCCCCceeEEEecc-cCccccc-CHHHHHHHHHHhccCCcEEE
Q 007641 448 PFPGIVFDAVHCAR-CRVPWHI-EGGKLLLELNRVLRPGGFFI 488 (595)
Q Consensus 448 Pfpd~sFDlV~~~~-c~v~~h~-d~~~lL~El~RvLKPGG~Lv 488 (595)
++++++||+|++.. ...+.+. ....+|.++.|+|||||+|+
T Consensus 126 ~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 126 HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 99888999999875 1122233 45789999999999999998
No 133
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.25 E-value=2.1e-10 Score=119.34 Aligned_cols=131 Identities=18% Similarity=0.226 Sum_probs=91.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
++.+|||||||+|.++..|+++ .++++|+ +.++..++.+.. ..++ .+.+...+... +++. .||+|++..
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~- 257 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLK-DEGLSDRVDVVEGDFFE-PLPR-KADAIILSF- 257 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHH-HTTCTTTEEEEECCTTS-CCSS-CEEEEEEES-
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHH-hcCCCCceEEEeCCCCC-CCCC-CccEEEEcc-
Confidence 4789999999999999999874 5788888 888777764443 3444 35566666543 4444 499999986
Q ss_pred CcccccCH---HHHHHHHHHhccCCcEEEEEeCC-CCCcC-ch-----hHH----------HHHHHHHHHHHcCCEEEEE
Q 007641 463 RVPWHIEG---GKLLLELNRVLRPGGFFIWSATP-VYQKL-PE-----DVE----------IWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 463 ~v~~h~d~---~~lL~El~RvLKPGG~Lvis~pp-~~~~l-~e-----~i~----------~w~~le~Lak~~Gw~~v~~ 522 (595)
++++... ..+|++++++|||||+|+|..+. ..... .. +.. ....+..+++.+||.++..
T Consensus 258 -vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (360)
T 1tw3_A 258 -VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEV 336 (360)
T ss_dssp -CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred -cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 4444433 48999999999999999998654 21110 00 000 1257788999999998877
Q ss_pred eec
Q 007641 523 SKD 525 (595)
Q Consensus 523 ~~~ 525 (595)
...
T Consensus 337 ~~~ 339 (360)
T 1tw3_A 337 RQL 339 (360)
T ss_dssp EEE
T ss_pred EeC
Confidence 654
No 134
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.23 E-value=4e-11 Score=123.99 Aligned_cols=99 Identities=14% Similarity=0.185 Sum_probs=76.3
Q ss_pred CCCCEEEEECCCCchhHHH-Hhh---CCcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 388 KRTRVVLDVGCGVASFGGF-LFD---RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~-La~---r~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
.++.+|||||||+|.++.. +++ ..|+|+|+++.++..|+...+. .++ .+.+...++..+| +++||+|++..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~-~gl~~v~~v~gDa~~l~--d~~FDvV~~~a- 196 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEG-LGVDGVNVITGDETVID--GLEFDVLMVAA- 196 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH-HTCCSEEEEESCGGGGG--GCCCSEEEECT-
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHh-cCCCCeEEEECchhhCC--CCCcCEEEECC-
Confidence 4689999999999976644 444 3799999999998888755443 344 3556666666665 68999999864
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
. ..+...++.++.|+|||||+|++....
T Consensus 197 -~--~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 197 -L--AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp -T--CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred -C--ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 2 347789999999999999999998643
No 135
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.23 E-value=1.6e-11 Score=124.71 Aligned_cols=107 Identities=14% Similarity=0.011 Sum_probs=73.9
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC-
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF- 449 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf- 449 (595)
++..+...+.. .++.+|||||||+|.++..|+++ .|+++|+++.|+..++.+... .. ...+...+++
T Consensus 33 ~~~~il~~l~l----~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~-~~-----v~~~~~~~~~~ 102 (261)
T 3iv6_A 33 DRENDIFLENI----VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALAD-RC-----VTIDLLDITAE 102 (261)
T ss_dssp HHHHHHHTTTC----CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSS-SC-----CEEEECCTTSC
T ss_pred HHHHHHHhcCC----CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHh-cc-----ceeeeeecccc
Confidence 34455555543 35789999999999999999985 799999998877655433211 11 1111222222
Q ss_pred ----CCCceeEEEecccCccccc---CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 450 ----PGIVFDAVHCARCRVPWHI---EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 450 ----pd~sFDlV~~~~c~v~~h~---d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.+++||+|++.. +++|. +...+|.++.++| |||+|+++..
T Consensus 103 ~~~~~~~~fD~Vv~~~--~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDR--LINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CCGGGTTCCSEEEEES--CGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cccccCCCccEEEEhh--hhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 257899999976 33343 3467999999999 9999999864
No 136
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.23 E-value=1.4e-11 Score=132.55 Aligned_cols=121 Identities=11% Similarity=0.020 Sum_probs=88.5
Q ss_pred ccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHH------HHHcCC
Q 007641 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQF------ALERGI 435 (595)
Q Consensus 366 F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~------A~ergi 435 (595)
|.......+..+...+.. .++.+|||||||+|.++..++.. .|+|||+++.++..|.... +...|+
T Consensus 154 YGEt~~~~i~~il~~l~l----~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 154 YGETSFDLVAQMIDEIKM----TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp GGGTHHHHHHHHHHHHCC----CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred cCCCCHHHHHHHHHhcCC----CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 444445555555555442 46889999999999999888863 4999999998877776432 223343
Q ss_pred ---CeeEeecCCCCCCCCC--CceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 436 ---PAISAVMGTERLPFPG--IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 436 ---~~~~~v~d~~~LPfpd--~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.+.+...++..+||++ ..||+|+++. +.+..+....|.+++|+|||||+|+++.+
T Consensus 230 ~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn--~~F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 230 KHAEYTLERGDFLSEEWRERIANTSVIFVNN--FAFGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp CCCEEEEEECCTTSHHHHHHHHTCSEEEECC--TTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred CCCCeEEEECcccCCccccccCCccEEEEcc--cccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 4566777788888754 4799999975 33445678889999999999999998754
No 137
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.23 E-value=1.2e-10 Score=116.45 Aligned_cols=124 Identities=16% Similarity=0.174 Sum_probs=90.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcC---CCeeEeecCCCCCCCCCCceeEEEe
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERG---IPAISAVMGTERLPFPGIVFDAVHC 459 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~erg---i~~~~~v~d~~~LPfpd~sFDlV~~ 459 (595)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..++.+.+...+ ..+.+...+...++++++.||+|++
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE
Confidence 35789999999999999988873 699999999888777755554413 2455666777777888889999998
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHH-cCCEEEEEeec
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKA-MCWELVSISKD 525 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~-~Gw~~v~~~~~ 525 (595)
.. .++..+|.++.++|+|||+|++..+. ......+...+.. .+|..+.....
T Consensus 178 ~~------~~~~~~l~~~~~~L~pgG~l~~~~~~--------~~~~~~~~~~l~~~~~f~~~~~~~~ 230 (280)
T 1i9g_A 178 DM------LAPWEVLDAVSRLLVAGGVLMVYVAT--------VTQLSRIVEALRAKQCWTEPRAWET 230 (280)
T ss_dssp ES------SCGGGGHHHHHHHEEEEEEEEEEESS--------HHHHHHHHHHHHHHSSBCCCEEECC
T ss_pred CC------cCHHHHHHHHHHhCCCCCEEEEEeCC--------HHHHHHHHHHHHhcCCcCCcEEEEE
Confidence 43 24568999999999999999998753 1223344444444 78876555443
No 138
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.23 E-value=1.3e-11 Score=131.08 Aligned_cols=113 Identities=17% Similarity=0.249 Sum_probs=81.4
Q ss_pred HHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC----CeeEeecCCC
Q 007641 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI----PAISAVMGTE 445 (595)
Q Consensus 374 id~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi----~~~~~v~d~~ 445 (595)
...+.+.++. .++.+|||||||+|.++..|+.+ .|+++|+++.++..++.+... .++ .+.+...+..
T Consensus 211 ~~~ll~~l~~----~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~-ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 211 ARFFMQHLPE----NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET-NMPEALDRCEFMINNAL 285 (375)
T ss_dssp HHHHHHTCCC----SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HCGGGGGGEEEEECSTT
T ss_pred HHHHHHhCcc----cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHH-cCCCcCceEEEEechhh
Confidence 4455666553 23589999999999999999885 699999999988877755443 333 2444555554
Q ss_pred CCCCCCCceeEEEecccCcccc--c--C-HHHHHHHHHHhccCCcEEEEEeCC
Q 007641 446 RLPFPGIVFDAVHCARCRVPWH--I--E-GGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~c~v~~h--~--d-~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
. ++++++||+|+|+..+ ++. . . ...+|.++.++|||||+|+|+.+.
T Consensus 286 ~-~~~~~~fD~Ii~nppf-h~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 286 S-GVEPFRFNAVLCNPPF-HQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp T-TCCTTCEEEEEECCCC--------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred c-cCCCCCeeEEEECCCc-ccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 4 5677899999998632 211 1 1 147899999999999999998643
No 139
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.22 E-value=1.2e-11 Score=113.62 Aligned_cols=122 Identities=16% Similarity=0.136 Sum_probs=82.2
Q ss_pred ccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecC
Q 007641 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMG 443 (595)
Q Consensus 366 F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d 443 (595)
+......+...+...+... ..++.+|||+|||+|.++..|+.+ .|+++|+++.++..++.+... .++.+.+...+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~d 96 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLR--YPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRR-TGLGARVVALP 96 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHH--CTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHH-HTCCCEEECSC
T ss_pred CCCCHHHHHHHHHHHHHhh--ccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHH-cCCceEEEecc
Confidence 3344444555554444320 114679999999999999999885 599999999988877755443 34455666666
Q ss_pred CCC-CCC---CCCceeEEEecccCcccccCHHHHHHHHH--HhccCCcEEEEEeCC
Q 007641 444 TER-LPF---PGIVFDAVHCARCRVPWHIEGGKLLLELN--RVLRPGGFFIWSATP 493 (595)
Q Consensus 444 ~~~-LPf---pd~sFDlV~~~~c~v~~h~d~~~lL~El~--RvLKPGG~Lvis~pp 493 (595)
... ++. ...+||+|++...+. .....++..+. ++|||||+|++..++
T Consensus 97 ~~~~~~~~~~~~~~~D~i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 97 VEVFLPEAKAQGERFTVAFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred HHHHHHhhhccCCceEEEEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 543 221 124799999986322 34456667776 999999999998654
No 140
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.22 E-value=5.1e-10 Score=115.34 Aligned_cols=130 Identities=14% Similarity=0.067 Sum_probs=91.9
Q ss_pred CEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHc-CCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 391 RVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALER-GIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~er-gi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
.+|||||||+|.++..|+++ .++++|+ +.++..++..+.... ...+.+...+... +++ ..||+|++.. ++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~--vl 243 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSR--II 243 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEES--CG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEch--hc
Confidence 89999999999999999874 6999999 988887765544322 2235556666554 565 6799999987 44
Q ss_pred ccc-CH--HHHHHHHHHhccCCcEEEEEeCCCCCc-Cch-----hHH----------HHHHHHHHHHHcCCEEEEEeec
Q 007641 466 WHI-EG--GKLLLELNRVLRPGGFFIWSATPVYQK-LPE-----DVE----------IWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 466 ~h~-d~--~~lL~El~RvLKPGG~Lvis~pp~~~~-l~e-----~i~----------~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
++. +. ..+|++++++|||||+|+|........ .+. +.. ....+..+++.+||..+.....
T Consensus 244 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 244 GDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDL 322 (334)
T ss_dssp GGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEEC
Confidence 443 33 499999999999999999986432111 010 000 1256788899999998876543
No 141
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.21 E-value=3.2e-10 Score=110.18 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=89.9
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~ 446 (595)
.....+...+..+. ..++.+|||+|||+|.++..|+++ .|+++|+++.++..+.. .+... ..+.+...+...
T Consensus 57 ~~~~~i~~~l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~-~~~~~-~~v~~~~~d~~~ 133 (227)
T 1g8a_A 57 KLGAAIMNGLKNFP-IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVP-IVEER-RNIVPILGDATK 133 (227)
T ss_dssp HHHHHHHTTCCCCC-CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHSSC-TTEEEEECCTTC
T ss_pred hHHHHHHhhHHhcC-CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHH-HHhcc-CCCEEEEccCCC
Confidence 33444433343221 235789999999999999998863 69999999887655542 23222 345556666544
Q ss_pred C---CCCCCceeEEEecccCcccccCH-HHHHHHHHHhccCCcEEEEEeCCCC-CcCchhHHHH-HHHHHHHHHcCCEEE
Q 007641 447 L---PFPGIVFDAVHCARCRVPWHIEG-GKLLLELNRVLRPGGFFIWSATPVY-QKLPEDVEIW-NAMSQLIKAMCWELV 520 (595)
Q Consensus 447 L---Pfpd~sFDlV~~~~c~v~~h~d~-~~lL~El~RvLKPGG~Lvis~pp~~-~~l~e~i~~w-~~le~Lak~~Gw~~v 520 (595)
. .....+||+|++... ..+. ..++.++.++|||||+|++...... ...+...... ..+..+ ... |.++
T Consensus 134 ~~~~~~~~~~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~ 207 (227)
T 1g8a_A 134 PEEYRALVPKVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVI 207 (227)
T ss_dssp GGGGTTTCCCEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEE
T ss_pred cchhhcccCCceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceee
Confidence 2 122358999998642 2333 4569999999999999998743211 1111111222 456666 666 9988
Q ss_pred EEeec
Q 007641 521 SISKD 525 (595)
Q Consensus 521 ~~~~~ 525 (595)
.....
T Consensus 208 ~~~~~ 212 (227)
T 1g8a_A 208 ERLNL 212 (227)
T ss_dssp EEEEC
T ss_pred eEecc
Confidence 76543
No 142
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.21 E-value=1e-10 Score=121.97 Aligned_cols=127 Identities=16% Similarity=0.037 Sum_probs=84.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
+..+|||||||+|.++..|+++ .++++|++. .+. . +.+...++ .+.+...+.. .++| .||+|++..
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~-~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~- 255 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--R-HRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR- 255 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--T-CCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES-
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--c-ccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh-
Confidence 4789999999999999999884 567888832 211 0 11111122 2455556654 4555 899999987
Q ss_pred CcccccC-H--HHHHHHHHHhccCCcEEEEEeCCCCCcCch------hHH----------HHHHHHHHHHHcCCEEEEEe
Q 007641 463 RVPWHIE-G--GKLLLELNRVLRPGGFFIWSATPVYQKLPE------DVE----------IWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 463 ~v~~h~d-~--~~lL~El~RvLKPGG~Lvis~pp~~~~l~e------~i~----------~w~~le~Lak~~Gw~~v~~~ 523 (595)
++++.. . ..+|++++|+|||||+|+|........... +.. ....+..+++.+||..+...
T Consensus 256 -vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 334 (348)
T 3lst_A 256 -ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVV 334 (348)
T ss_dssp -CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred -hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 444443 3 599999999999999999986432111000 000 12578889999999998876
Q ss_pred e
Q 007641 524 K 524 (595)
Q Consensus 524 ~ 524 (595)
.
T Consensus 335 ~ 335 (348)
T 3lst_A 335 G 335 (348)
T ss_dssp E
T ss_pred E
Confidence 5
No 143
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.21 E-value=6.9e-11 Score=125.28 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=82.8
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCC
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERL 447 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~L 447 (595)
|.+.|...+.. .++.+|||||||+|.++..|+++ .|+|+|++ .++..++ +.+...++. +.+...++..+
T Consensus 51 ~~~~i~~~~~~----~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 51 YFNAVFQNKHH----FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVEDI 124 (376)
T ss_dssp HHHHHHTTTTT----TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGGGC
T ss_pred HHHHHHhcccc----CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchhhc
Confidence 44445444332 35789999999999999999985 79999999 8887775 444455554 56777778888
Q ss_pred CCCCCceeEEEecccCcccc----cCHHHHHHHHHHhccCCcEEEEEe
Q 007641 448 PFPGIVFDAVHCARCRVPWH----IEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 448 Pfpd~sFDlV~~~~c~v~~h----~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+++ ++||+|++.. +.+. .....+|..++|+|||||+|++..
T Consensus 125 ~~~-~~~D~Iv~~~--~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 125 SLP-EKVDVIISEW--MGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CCS-SCEEEEEECC--CBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred CcC-CcceEEEEcC--hhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 877 8899999964 2222 245789999999999999998653
No 144
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.20 E-value=8.8e-12 Score=130.17 Aligned_cols=113 Identities=15% Similarity=0.138 Sum_probs=82.1
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP 448 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP 448 (595)
....+.+.+.. .+..+|||||||+|.++..|+.+ .|+++|+++.++..++.+.. ..++...+...+...
T Consensus 184 ~~~~ll~~l~~----~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~-~~~~~~~~~~~d~~~-- 256 (343)
T 2pjd_A 184 GSQLLLSTLTP----HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLA-ANGVEGEVFASNVFS-- 256 (343)
T ss_dssp HHHHHHHHSCT----TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHH-HTTCCCEEEECSTTT--
T ss_pred HHHHHHHhcCc----CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-HhCCCCEEEEccccc--
Confidence 34555555532 23568999999999999999874 69999999988877765443 455555555555544
Q ss_pred CCCCceeEEEecccCccc----cc-CHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 449 FPGIVFDAVHCARCRVPW----HI-EGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 449 fpd~sFDlV~~~~c~v~~----h~-d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
+.+++||+|+|+.+ +++ +. ....+|.++.|+|||||+|++..+.
T Consensus 257 ~~~~~fD~Iv~~~~-~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 257 EVKGRFDMIISNPP-FHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp TCCSCEEEEEECCC-CCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cccCCeeEEEECCC-cccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 33678999999863 222 11 3478999999999999999998653
No 145
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.19 E-value=9.1e-11 Score=117.85 Aligned_cols=124 Identities=13% Similarity=0.042 Sum_probs=85.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH--cCCC--eeEeecCCCCC-------CCCCCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE--RGIP--AISAVMGTERL-------PFPGIV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e--rgi~--~~~~v~d~~~L-------Pfpd~s 453 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.+.... .++. +.+...+...+ ++++++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 4679999999999999999875 6999999988777666443320 3333 55666666555 366789
Q ss_pred eeEEEecccCccc--------------c---cCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcC
Q 007641 454 FDAVHCARCRVPW--------------H---IEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMC 516 (595)
Q Consensus 454 FDlV~~~~c~v~~--------------h---~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~G 516 (595)
||+|+++.+++.. | .....+|..+.++|||||+|++..++. ....+..+++..
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~- 185 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---------SVAEIIAACGSR- 185 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---------GHHHHHHHHTTT-
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---------HHHHHHHHHHhc-
Confidence 9999998543321 0 124688999999999999999976531 223455555554
Q ss_pred CEEEEE
Q 007641 517 WELVSI 522 (595)
Q Consensus 517 w~~v~~ 522 (595)
|..+..
T Consensus 186 ~~~~~i 191 (260)
T 2ozv_A 186 FGGLEI 191 (260)
T ss_dssp EEEEEE
T ss_pred CCceEE
Confidence 665544
No 146
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.18 E-value=1.9e-11 Score=113.99 Aligned_cols=102 Identities=15% Similarity=0.016 Sum_probs=74.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC-CCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~-LPfpd~sFDlV~~~~c 462 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++.+. ...++. +.+...+... ++.....||+|++...
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNI-IMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-HTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH-HHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 4679999999999999998875 6999999998887776443 334443 4555555544 4444467999999753
Q ss_pred CcccccCHHHHHHHHH--HhccCCcEEEEEeCC
Q 007641 463 RVPWHIEGGKLLLELN--RVLRPGGFFIWSATP 493 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~--RvLKPGG~Lvis~pp 493 (595)
+ .......++..+. ++|+|||+|++..+.
T Consensus 110 ~--~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 110 Y--AKETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp S--HHHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred C--CcchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 2 1223456777776 999999999998654
No 147
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.18 E-value=1.7e-10 Score=120.71 Aligned_cols=124 Identities=15% Similarity=-0.054 Sum_probs=91.5
Q ss_pred CCCEEEEECCCCchhHHHHhh-----CCcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~-----r~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
++.+|||+|||+|.++..++. ..|+|+|+++.++..++.+. ...++ .+.+...+...++++...||+|+++.+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~-~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAA-LASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHH-HHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHH-HHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 578999999999999988876 47999999999988887554 44555 466777888888877778999999864
Q ss_pred CcccccC-------HHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 463 RVPWHIE-------GGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 463 ~v~~h~d-------~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
+-....+ ...++.++.++|||||++++..+. ...+..+++ .||........
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~-----------~~~~~~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR-----------PALLKRALP-PGFALRHARVV 339 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC-----------HHHHHHHCC-TTEEEEEEEEC
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC-----------HHHHHHHhh-cCcEEEEEEEE
Confidence 2211111 157899999999999999998652 122344555 89987766544
No 148
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.17 E-value=1.5e-10 Score=122.11 Aligned_cols=127 Identities=14% Similarity=0.071 Sum_probs=86.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++. .++.. ..+.+...+... |+|.+ |+|++.. +
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~--v 270 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQ-----DAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKW--I 270 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHT-----TCCCC-TTEEEEECCTTT-CCCCC--SEEEEES--C
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHH-----hhhhc-CCCEEEecCCCC-CCCCC--CEEEEec--h
Confidence 4689999999999999999874 5788888 54432 22222 235556666654 77754 9999987 4
Q ss_pred ccccCH---HHHHHHHHHhccCCcEEEEEeCCCCCcC--c--------hhHH-----------HHHHHHHHHHHcCCEEE
Q 007641 465 PWHIEG---GKLLLELNRVLRPGGFFIWSATPVYQKL--P--------EDVE-----------IWNAMSQLIKAMCWELV 520 (595)
Q Consensus 465 ~~h~d~---~~lL~El~RvLKPGG~Lvis~pp~~~~l--~--------e~i~-----------~w~~le~Lak~~Gw~~v 520 (595)
+++... ..+|++++|+|||||+|+|......... . .++. .-..+..+++.+||..+
T Consensus 271 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v 350 (368)
T 3reo_A 271 CHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGF 350 (368)
T ss_dssp GGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeee
Confidence 444432 5889999999999999999864321110 0 0000 01567889999999998
Q ss_pred EEeeccc
Q 007641 521 SISKDTI 527 (595)
Q Consensus 521 ~~~~~~l 527 (595)
.......
T Consensus 351 ~~~~~~~ 357 (368)
T 3reo_A 351 KVASCAF 357 (368)
T ss_dssp EEEEEET
T ss_pred EEEEeCC
Confidence 8766543
No 149
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=5.3e-11 Score=108.60 Aligned_cols=93 Identities=14% Similarity=0.114 Sum_probs=70.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC--------CCCCce
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP--------FPGIVF 454 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP--------fpd~sF 454 (595)
.++.+|||||||+|.++..|+++ .|+++|+++ ++.. ..+.+...+...++ +++++|
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 35789999999999999888764 689999998 5421 23455666666666 777899
Q ss_pred eEEEecccCcccccCH-----------HHHHHHHHHhccCCcEEEEEeC
Q 007641 455 DAVHCARCRVPWHIEG-----------GKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 455 DlV~~~~c~v~~h~d~-----------~~lL~El~RvLKPGG~Lvis~p 492 (595)
|+|++..+ +++.... ..+|.++.++|+|||+|++..+
T Consensus 90 D~i~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 90 QVVMSDMA-PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCC-ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99999752 2222222 5899999999999999999764
No 150
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.17 E-value=2.9e-10 Score=114.44 Aligned_cols=123 Identities=13% Similarity=0.120 Sum_probs=90.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEec
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~ 460 (595)
.++.+|||+|||+|.++..|+++ .|+++|+++.++..++.+.. ..++ .+.+...+.... ++++.||+|++.
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~ 188 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLT-KWGLIERVTIKVRDISEG-FDEKDVDALFLD 188 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHH-HTTCGGGEEEECCCGGGC-CSCCSEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH-HcCCCCCEEEEECCHHHc-ccCCccCEEEEC
Confidence 35789999999999999888764 69999999988877764433 3344 344555555544 666789999985
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeecc
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDT 526 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~~ 526 (595)
. .++..+|.++.++|+|||+|++..+. ......+...++..||..+......
T Consensus 189 ~------~~~~~~l~~~~~~L~pgG~l~~~~~~--------~~~~~~~~~~l~~~gf~~~~~~~~~ 240 (277)
T 1o54_A 189 V------PDPWNYIDKCWEALKGGGRFATVCPT--------TNQVQETLKKLQELPFIRIEVWESL 240 (277)
T ss_dssp C------SCGGGTHHHHHHHEEEEEEEEEEESS--------HHHHHHHHHHHHHSSEEEEEEECCC
T ss_pred C------cCHHHHHHHHHHHcCCCCEEEEEeCC--------HHHHHHHHHHHHHCCCceeEEEEEe
Confidence 3 24568999999999999999998753 1234566667778999877665443
No 151
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.16 E-value=2.4e-10 Score=117.74 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=90.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHH---Hc-CCCeeEeecCCCCCCC--CCCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFAL---ER-GIPAISAVMGTERLPF--PGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~---er-gi~~~~~v~d~~~LPf--pd~sFDlV~ 458 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..++..+.. .. ...+.+...+...++. ++++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 4689999999999999999875 699999999887777654321 11 2235566666554433 468899999
Q ss_pred ecccCcccccCH----HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 459 CARCRVPWHIEG----GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 459 ~~~c~v~~h~d~----~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
+.. ..++.... ..+++++.|+|||||+|++.....+.. ......+.+.++..||..+....
T Consensus 175 ~d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~GF~~v~~~~ 239 (304)
T 3bwc_A 175 IDT-TDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD----LELIEKMSRFIRETGFASVQYAL 239 (304)
T ss_dssp EEC-C---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ECC-CCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc----hHHHHHHHHHHHhCCCCcEEEEE
Confidence 964 22222111 689999999999999999986543221 23456777888899998766543
No 152
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.16 E-value=2.3e-10 Score=121.15 Aligned_cols=138 Identities=17% Similarity=0.028 Sum_probs=100.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
++.+|||+|||+|.++..++.. .|+|+|+++.++..++.+. ...++ .+.+...+...+++++++||+|+++.+
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~-~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNA-LAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHH-HHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHH-HHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 5789999999999999999874 7999999999988887554 44565 467778888889888889999999763
Q ss_pred Ccccc---c---CH-HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEE
Q 007641 463 RVPWH---I---EG-GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVY 535 (595)
Q Consensus 463 ~v~~h---~---d~-~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~ 535 (595)
+-... . +. ..++.++.|+| ||.+++..+. ...+..++...||.........-.+..+.+|
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-----------~~~~~~~~~~~G~~~~~~~~~~nG~l~~~~~ 362 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-----------KKAIEEAIAENGFEIIHHRVIGHGGLMVHLY 362 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-----------HHHHHHHHHHTTEEEEEEEEEEETTEEEEEE
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-----------HHHHHHHHHHcCCEEEEEEEEEcCCEEEEEE
Confidence 22111 0 11 57888999999 4444444331 2456678889999988876665555667777
Q ss_pred EeCCC
Q 007641 536 RKPTS 540 (595)
Q Consensus 536 ~KP~~ 540 (595)
+.|..
T Consensus 363 ~~~~~ 367 (373)
T 3tm4_A 363 VVKLE 367 (373)
T ss_dssp EEEET
T ss_pred eccCc
Confidence 76643
No 153
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.16 E-value=5.9e-10 Score=110.92 Aligned_cols=99 Identities=15% Similarity=0.104 Sum_probs=74.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC-CCCC--CCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LPFP--GIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~-LPfp--d~sFDlV~ 458 (595)
++.+|||||||+|.++..|+.+ .|+++|+++.++..++..+. ..++. +.+...+... ++.. .++||+|+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQ-LAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 4689999999999999999875 69999999988877764443 34543 5566666533 4432 34899999
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+.. .......+|.++.++|||||+|++...
T Consensus 142 ~d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDA----DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECS----CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECC----chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 864 233557899999999999999998754
No 154
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.16 E-value=1.1e-10 Score=113.41 Aligned_cols=109 Identities=13% Similarity=0.093 Sum_probs=76.8
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
.....+...+.. .++.+|||||||+|.++..|+.. .|+++|+++.++..++.... ..+ .+.+...+......
T Consensus 57 ~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~-~v~~~~~d~~~~~~ 130 (231)
T 1vbf_A 57 NLGIFMLDELDL----HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLS-YYN-NIKLILGDGTLGYE 130 (231)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHT-TCS-SEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHh-hcC-CeEEEECCcccccc
Confidence 344555555432 35789999999999999999884 79999999887766653332 223 45566666554222
Q ss_pred CCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
++++||+|++.. +.++.. .++.++|||||+|++..++
T Consensus 131 ~~~~fD~v~~~~--~~~~~~-----~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 131 EEKPYDRVVVWA--TAPTLL-----CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GGCCEEEEEESS--BBSSCC-----HHHHHTEEEEEEEEEEECS
T ss_pred cCCCccEEEECC--cHHHHH-----HHHHHHcCCCcEEEEEEcC
Confidence 457899999986 333432 4789999999999998754
No 155
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.14 E-value=2e-10 Score=119.43 Aligned_cols=112 Identities=18% Similarity=0.186 Sum_probs=80.7
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~ 446 (595)
.|...|.+.+.. .++.+|||||||+|.++..++++ .|+|+|++ .++..++ +.+...++. +.+...+...
T Consensus 25 ~y~~ai~~~~~~----~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~-~~~~~~~~~~~i~~~~~d~~~ 98 (328)
T 1g6q_1 25 SYRNAIIQNKDL----FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAK-ELVELNGFSDKITLLRGKLED 98 (328)
T ss_dssp HHHHHHHHHHHH----HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhhHhh----cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHH-HHHHHcCCCCCEEEEECchhh
Confidence 345555444332 24679999999999999999885 69999999 4666554 333444543 5666777888
Q ss_pred CCCCCCceeEEEecccC-cccc-cCHHHHHHHHHHhccCCcEEEE
Q 007641 447 LPFPGIVFDAVHCARCR-VPWH-IEGGKLLLELNRVLRPGGFFIW 489 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~-v~~h-~d~~~lL~El~RvLKPGG~Lvi 489 (595)
+++++++||+|++.... .+.+ .....+|.++.|+|||||+|++
T Consensus 99 ~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 88888899999997421 1112 2457899999999999999984
No 156
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.14 E-value=2.1e-10 Score=118.40 Aligned_cols=110 Identities=15% Similarity=0.060 Sum_probs=80.0
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--C---cEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--G---VLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTE 445 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~---V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~ 445 (595)
.....+...+.. .++.+|||||||+|.++..|+++ . |+++|+++.++..++.+. ...++. +.+...+..
T Consensus 62 ~~~~~l~~~l~~----~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~g~~~v~~~~~d~~ 136 (317)
T 1dl5_A 62 SLMALFMEWVGL----DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNV-ERLGIENVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEESCGG
T ss_pred HHHHHHHHhcCC----CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCeEEEECChh
Confidence 344555555542 35789999999999999999874 4 999999998887776443 344544 555666666
Q ss_pred CCCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 446 RLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
..+.+++.||+|++.. ...+.. ..+.++|||||+|++...+
T Consensus 137 ~~~~~~~~fD~Iv~~~--~~~~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTV--GVDEVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GCCGGGCCEEEEEECS--BBSCCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred hccccCCCeEEEEEcC--CHHHHH-----HHHHHhcCCCcEEEEEECC
Confidence 6554567899999986 333433 5789999999999998654
No 157
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.14 E-value=4.8e-10 Score=113.84 Aligned_cols=147 Identities=16% Similarity=0.055 Sum_probs=91.4
Q ss_pred chHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeC-CchhHHHHHHHHH----HHcCC-----
Q 007641 369 GALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSF-APKDEHEAQVQFA----LERGI----- 435 (595)
Q Consensus 369 ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDi-sp~di~~aqvq~A----~ergi----- 435 (595)
......+++...... .++.+|||||||+|.++..++.. .|+++|+ ++.++..++.+.. ...++
T Consensus 63 ~~~~l~~~l~~~~~~----~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~ 138 (281)
T 3bzb_A 63 GARALADTLCWQPEL----IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKR 138 (281)
T ss_dssp HHHHHHHHHHHCGGG----TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHHHhcchh----cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCC
Confidence 334445555554322 24679999999999999988874 6999999 8888877765542 22232
Q ss_pred -CeeEeecCC----CCCC--CCCCceeEEEecccCcccccCHHHHHHHHHHhcc---C--CcEEEEEeCCCCCcCchhHH
Q 007641 436 -PAISAVMGT----ERLP--FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLR---P--GGFFIWSATPVYQKLPEDVE 503 (595)
Q Consensus 436 -~~~~~v~d~----~~LP--fpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLK---P--GG~Lvis~pp~~~~l~e~i~ 503 (595)
.+.+...+. ..+. ++++.||+|+++.+ +++..+...+|..+.++|+ | ||.+++...+....+..
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dv-l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~--- 214 (281)
T 3bzb_A 139 ASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADL-LSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAE--- 214 (281)
T ss_dssp CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESC-CSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC----------
T ss_pred CCeEEEEecCCCccHHHHhhccCCCCCEEEEeCc-ccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccch---
Confidence 233332221 1121 03578999999763 2333466899999999999 9 99988765442211111
Q ss_pred HHHHHHHHHHHcC-CEEEEEe
Q 007641 504 IWNAMSQLIKAMC-WELVSIS 523 (595)
Q Consensus 504 ~w~~le~Lak~~G-w~~v~~~ 523 (595)
....+..+++..| |.+....
T Consensus 215 ~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 215 RDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp -CTHHHHHHHHSTTEEEEEEE
T ss_pred hHHHHHHHHHhcCCEEEEEec
Confidence 1234556778899 9877653
No 158
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.14 E-value=3.2e-10 Score=112.31 Aligned_cols=102 Identities=20% Similarity=0.203 Sum_probs=75.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHc-------CC-CeeEeecCCCC-CC--CCCCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALER-------GI-PAISAVMGTER-LP--FPGIV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~er-------gi-~~~~~v~d~~~-LP--fpd~s 453 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..+..+....+ ++ .+.+...++.. ++ ++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4679999999999999999874 59999999998877765544321 44 35566666654 66 77889
Q ss_pred eeEEEecccCcccccC--------HHHHHHHHHHhccCCcEEEEEe
Q 007641 454 FDAVHCARCRVPWHIE--------GGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 454 FDlV~~~~c~v~~h~d--------~~~lL~El~RvLKPGG~Lvis~ 491 (595)
||.|++..+ -+|... ...+|.++.++|+|||+|++..
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 999986542 122111 1489999999999999999964
No 159
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.14 E-value=3.1e-10 Score=110.36 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=71.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC-CCCC-----CCcee
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LPFP-----GIVFD 455 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~-LPfp-----d~sFD 455 (595)
++.+|||||||+|.++.+|+++ .|+++|+++.++..++.++.. .++. +.+...+... ++.. .++||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNF-AGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH-cCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 4679999999999999999873 699999999988877655443 3443 5556666422 3322 26899
Q ss_pred EEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 456 lV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+|++.. ...+......++..+ ++|||||+|++..
T Consensus 137 ~V~~d~-~~~~~~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 137 MVFLDH-WKDRYLPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp EEEECS-CGGGHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred EEEEcC-CcccchHHHHHHHhc-cccCCCeEEEEeC
Confidence 999875 222232344677777 9999999999864
No 160
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.14 E-value=1.7e-10 Score=117.84 Aligned_cols=100 Identities=15% Similarity=0.144 Sum_probs=71.7
Q ss_pred CCEEEEECCCCch----hHHHHhhC--------CcEEEeCCchhHHHHHHHHH---HH-------------------cC-
Q 007641 390 TRVVLDVGCGVAS----FGGFLFDR--------GVLTMSFAPKDEHEAQVQFA---LE-------------------RG- 434 (595)
Q Consensus 390 ~~rVLDIGCGtG~----~a~~La~r--------~V~giDisp~di~~aqvq~A---~e-------------------rg- 434 (595)
..+|||+|||+|. ++..|++. .|+|+||++.++..|+...- .. .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5799999999997 56556542 69999999988877764310 00 00
Q ss_pred --------CCeeEeecCCCCCCCC-CCceeEEEecccCcccccCH---HHHHHHHHHhccCCcEEEEEe
Q 007641 435 --------IPAISAVMGTERLPFP-GIVFDAVHCARCRVPWHIEG---GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 435 --------i~~~~~v~d~~~LPfp-d~sFDlV~~~~c~v~~h~d~---~~lL~El~RvLKPGG~Lvis~ 491 (595)
..+.+...+....||+ .+.||+|+|.. ++.+.++ ..++..++++|+|||+|++..
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crn--vliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRN--VMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECS--SGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECC--chHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 1245566666666665 57899999986 3334433 699999999999999999863
No 161
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.13 E-value=3.8e-10 Score=108.40 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=75.6
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCC
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTER 446 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~ 446 (595)
....+...+.. .++.+|||||||+|.++..|+.. .|+++|+++.++..++..... .++. +.+...+..
T Consensus 65 ~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~v~~~~~d~~- 138 (215)
T 2yxe_A 65 MVGMMCELLDL----KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK-LGYDNVIVIVGDGT- 138 (215)
T ss_dssp HHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-HTCTTEEEEESCGG-
T ss_pred HHHHHHHhhCC----CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-cCCCCeEEEECCcc-
Confidence 34445554432 35789999999999999888763 699999999888777644433 3443 444555543
Q ss_pred CCCC-CCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 447 LPFP-GIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 447 LPfp-d~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
.+++ .+.||+|++.. ..++.. .++.++|||||+|++..++
T Consensus 139 ~~~~~~~~fD~v~~~~--~~~~~~-----~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 139 LGYEPLAPYDRIYTTA--AGPKIP-----EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GCCGGGCCEEEEEESS--BBSSCC-----HHHHHTEEEEEEEEEEESS
T ss_pred cCCCCCCCeeEEEECC--chHHHH-----HHHHHHcCCCcEEEEEECC
Confidence 2333 57899999986 333433 4889999999999998754
No 162
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.13 E-value=2.4e-10 Score=119.69 Aligned_cols=113 Identities=17% Similarity=0.228 Sum_probs=80.8
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~ 446 (595)
.|...|.+.+.. .++.+|||||||+|.++..++++ .|+|+|+++ ++..++ +.+...++ .+.+...+...
T Consensus 37 ~y~~~i~~~l~~----~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~-~~~~~~~l~~~v~~~~~d~~~ 110 (348)
T 2y1w_A 37 TYQRAILQNHTD----FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEE 110 (348)
T ss_dssp HHHHHHHHTGGG----TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhcccc----CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH-HHHHHcCCCCcEEEEEcchhh
Confidence 355566655543 25789999999999999999875 699999996 665444 33444454 35666677777
Q ss_pred CCCCCCceeEEEecccCcccc-cCHHHHHHHHHHhccCCcEEEEEe
Q 007641 447 LPFPGIVFDAVHCARCRVPWH-IEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~v~~h-~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
++++ .+||+|++.....++. .....+|.++.|+|||||+|++..
T Consensus 111 ~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 111 VSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 7766 5799999976322222 234678889999999999998653
No 163
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.13 E-value=1.7e-10 Score=117.14 Aligned_cols=102 Identities=11% Similarity=0.092 Sum_probs=73.1
Q ss_pred CCCEEEEECCCC---chhHHHHhh----CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC-----------CCC
Q 007641 389 RTRVVLDVGCGV---ASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL-----------PFP 450 (595)
Q Consensus 389 ~~~rVLDIGCGt---G~~a~~La~----r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L-----------Pfp 450 (595)
...+|||||||+ |.++..+.+ ..|+++|+++.++..++.... ....+.+...+...+ .++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 357999999999 988766654 379999999988877664432 122355566665432 133
Q ss_pred CCceeEEEecccCcccccC--HHHHHHHHHHhccCCcEEEEEeCC
Q 007641 451 GIVFDAVHCARCRVPWHIE--GGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 451 d~sFDlV~~~~c~v~~h~d--~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
..+||+|++.. .++|..+ ...+|++++|+|||||+|+|....
T Consensus 155 ~~~~d~v~~~~-vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 155 FSRPAAIMLVG-MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp TTSCCEEEETT-TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCCEEEEEec-hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 34899999975 3333333 689999999999999999998643
No 164
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.12 E-value=4.4e-11 Score=118.41 Aligned_cols=136 Identities=10% Similarity=0.089 Sum_probs=82.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCC---CCC---CCceeE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERL---PFP---GIVFDA 456 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~L---Pfp---d~sFDl 456 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.+.. ..++. +.+...+...+ +++ +.+||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVE-QNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH-HcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 4679999999999999888763 79999999999888775543 34543 55666665431 455 268999
Q ss_pred EEecccCcccc-----c---------CHHHHHHHHHHhccCCcEEEEEeCCC---------CCcCc---hhHHHHHHHHH
Q 007641 457 VHCARCRVPWH-----I---------EGGKLLLELNRVLRPGGFFIWSATPV---------YQKLP---EDVEIWNAMSQ 510 (595)
Q Consensus 457 V~~~~c~v~~h-----~---------d~~~lL~El~RvLKPGG~Lvis~pp~---------~~~l~---e~i~~w~~le~ 510 (595)
|+|+.+++... . ....++.+++|+|||||.|++....+ ..... ........+..
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 223 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKE 223 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHH
Confidence 99986443221 0 11245677888888888776542100 00000 00001246778
Q ss_pred HHHHcCCEEEEEeec
Q 007641 511 LIKAMCWELVSISKD 525 (595)
Q Consensus 511 Lak~~Gw~~v~~~~~ 525 (595)
+++.+||..+.....
T Consensus 224 ~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 224 ELRIQGVPKVTYTEF 238 (254)
T ss_dssp HHHHTTCSEEEEEEE
T ss_pred HHHHcCCCceEEEEE
Confidence 899999987765443
No 165
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.12 E-value=1.6e-10 Score=113.61 Aligned_cols=158 Identities=10% Similarity=0.141 Sum_probs=98.0
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC---eeEeec
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP---AISAVM 442 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~---~~~~v~ 442 (595)
..++..+...... .+..+|||||||+|.++..|+.+ .|+++|+++.++..++..+. ..++. +.+...
T Consensus 42 ~~~l~~l~~~~~~----~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 42 GQLLTTLAATTNG----NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFR-EAGYSPSRVRFLLS 116 (221)
T ss_dssp HHHHHHHHHHSCC----TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHH-HTTCCGGGEEEECS
T ss_pred HHHHHHHHHhhCC----CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCcCcEEEEEc
Confidence 4445555444321 23459999999999999999873 69999999998887765443 44544 455555
Q ss_pred CCCC-CC-CCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCC----Cc--CchhHHHHHHHHHHHHH
Q 007641 443 GTER-LP-FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVY----QK--LPEDVEIWNAMSQLIKA 514 (595)
Q Consensus 443 d~~~-LP-fpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~----~~--l~e~i~~w~~le~Lak~ 514 (595)
++.. ++ +++++||+|++.. ...+...++.++.|+|||||+|++...... .. ..........+...+..
T Consensus 117 da~~~l~~~~~~~fD~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~ 192 (221)
T 3dr5_A 117 RPLDVMSRLANDSYQLVFGQV----SPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRS 192 (221)
T ss_dssp CHHHHGGGSCTTCEEEEEECC----CTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHhcCCCcCeEEEcC----cHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhh
Confidence 5433 33 3468999999864 233456799999999999999998532211 11 11111223444444433
Q ss_pred c-CCEEEEEeecccCceEEEEEEeCCCh
Q 007641 515 M-CWELVSISKDTINKVGIAVYRKPTSN 541 (595)
Q Consensus 515 ~-Gw~~v~~~~~~l~~~giaI~~KP~~~ 541 (595)
. .|..+.. ..+.|+.|-+++..+
T Consensus 193 ~~~~~~~~l----p~gdGl~~~~~~~~~ 216 (221)
T 3dr5_A 193 IEGAHVARL----PLGAGLTVVTKALEH 216 (221)
T ss_dssp CTTEEEEEE----SSTTCEEEEEECCCC
T ss_pred CCCeeEEEe----eccchHHHHHHHHHh
Confidence 3 3443322 335677877777653
No 166
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.12 E-value=3.2e-10 Score=117.39 Aligned_cols=128 Identities=17% Similarity=0.251 Sum_probs=88.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEecc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
.++.+|||+|||+|..+.+|+.+ .|+++|+++.++..++.+.. ..++ .+.+...+...++...+.||+|++..
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~-~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLS-RLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH-HHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHH-HhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 35789999999999999999863 59999999988877764443 3455 45566666666665557899999843
Q ss_pred -c----CcccccC----------------HHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEE
Q 007641 462 -C----RVPWHIE----------------GGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELV 520 (595)
Q Consensus 462 -c----~v~~h~d----------------~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v 520 (595)
| .+..+.+ ...+|.++.++|||||+|++++..+... ++ -..+..+++..+|.++
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~--En---e~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE--EN---EFVIQWALDNFDVELL 270 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHSSEEEE
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH--Hh---HHHHHHHHhcCCCEEe
Confidence 1 1111111 1488999999999999999976443322 11 1345667778888765
Q ss_pred E
Q 007641 521 S 521 (595)
Q Consensus 521 ~ 521 (595)
.
T Consensus 271 ~ 271 (315)
T 1ixk_A 271 P 271 (315)
T ss_dssp C
T ss_pred c
Confidence 3
No 167
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.12 E-value=2.4e-10 Score=117.67 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=73.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHc-----CCCeeEeecCCCC-CCCCCCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALER-----GIPAISAVMGTER-LPFPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~er-----gi~~~~~v~d~~~-LPfpd~sFDlV~ 458 (595)
...+|||||||+|.++..|+++ .|+++|+++.++..++..+.... ...+.+...|... +....++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4689999999999999999885 58999999998888775544321 2234555666533 445568899999
Q ss_pred ecccCcccccC----HHHHHHHHHHhccCCcEEEEEeC
Q 007641 459 CARCRVPWHIE----GGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 459 ~~~c~v~~h~d----~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+.. ..++... ...+++.+.|+|||||+|++...
T Consensus 163 ~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 163 SDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 964 2222221 26899999999999999998753
No 168
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.12 E-value=5.9e-12 Score=123.37 Aligned_cols=99 Identities=19% Similarity=0.119 Sum_probs=75.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.+ +...++ .+.+...+...++ ++++||+|++..+ +
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~-~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNN-AEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP-W 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC-C
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC-c
Confidence 4789999999999999999986 799999999988777644 344555 4566777766665 5679999999863 2
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
++.......+.+++++|+|||++++.
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCcchhhhHHHHHHhhcCCcceeHHH
Confidence 22223445778899999999997765
No 169
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.11 E-value=1.5e-10 Score=113.73 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=75.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCC-CC-CCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LP-FPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~-LP-fpd~sFDlV~~~ 460 (595)
++.+|||||||+|.++..|+.. .|+++|+++.++..++..+ ...++ .+.+...+... ++ ..+++||+|++.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNL-ATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHH-HHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 4679999999999999999883 7999999999887776444 34454 35566666543 44 446899999986
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
. .......+|..+.++|||||+|++..
T Consensus 150 ~----~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 150 A----AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp T----TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred C----cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 4 23356789999999999999998864
No 170
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.11 E-value=3.9e-10 Score=118.84 Aligned_cols=126 Identities=13% Similarity=0.030 Sum_probs=86.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++ ..|+.. ..+.+...+... |+|.+ |+|++.. +
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-----~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~--v 268 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVI-----SEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKW--I 268 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-----TTCCCC-TTEEEEECCTTT-CCCCC--SEEEEES--C
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHH-----Hhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehH--H
Confidence 5789999999999999999874 5788888 5433 222222 345566666665 77754 9999987 4
Q ss_pred ccccC---HHHHHHHHHHhccCCcEEEEEeCCCCCcC--c--------hhHHH-----------HHHHHHHHHHcCCEEE
Q 007641 465 PWHIE---GGKLLLELNRVLRPGGFFIWSATPVYQKL--P--------EDVEI-----------WNAMSQLIKAMCWELV 520 (595)
Q Consensus 465 ~~h~d---~~~lL~El~RvLKPGG~Lvis~pp~~~~l--~--------e~i~~-----------w~~le~Lak~~Gw~~v 520 (595)
+++.. ...+|++++|+|||||+|+|......... . .+... ...+..+++.+||+.+
T Consensus 269 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v 348 (364)
T 3p9c_A 269 LHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGV 348 (364)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEE
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceE
Confidence 44442 35899999999999999999854321110 0 00000 1567889999999998
Q ss_pred EEeecc
Q 007641 521 SISKDT 526 (595)
Q Consensus 521 ~~~~~~ 526 (595)
......
T Consensus 349 ~~~~~~ 354 (364)
T 3p9c_A 349 KSTYIY 354 (364)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 876543
No 171
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.11 E-value=7e-10 Score=112.32 Aligned_cols=123 Identities=16% Similarity=0.123 Sum_probs=86.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
.++.+|||+|||+|.++..|+.+ .|+++|+++.++..++.+. ...++ .+.+...++..++. ...||+|++..+
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~-~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p 195 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENI-KLNKLNNVIPILADNRDVEL-KDVADRVIMGYV 195 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHH-HHTTCSSEEEEESCGGGCCC-TTCEEEEEECCC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCCEEEEECChHHcCc-cCCceEEEECCc
Confidence 35789999999999999999884 6999999999888776544 34454 45566666666644 578999999763
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEE
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
. ....++..+.++|+|||+|+++..+......+ .....+..+.+..++.+
T Consensus 196 ~-----~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 245 (272)
T 3a27_A 196 H-----KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYE--RPIERLKFYAEKNGYKL 245 (272)
T ss_dssp S-----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTT--HHHHHHHHHHHHTTEEE
T ss_pred c-----cHHHHHHHHHHHcCCCCEEEEEEcCccccccc--cHHHHHHHHHHHhCCee
Confidence 2 55678999999999999999886432221111 11233444555556543
No 172
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.10 E-value=1.1e-10 Score=115.67 Aligned_cols=103 Identities=17% Similarity=0.029 Sum_probs=71.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC------CcEEEeCCchhHHHHHHHHHHHc--CCC------------------------
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR------GVLTMSFAPKDEHEAQVQFALER--GIP------------------------ 436 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r------~V~giDisp~di~~aqvq~A~er--gi~------------------------ 436 (595)
+..+|||+|||+|.++..|+.+ .|+|+|+++.++..++....... ++.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4679999999999999888764 69999999998877764432210 110
Q ss_pred ---ee-------------EeecCCCCCCC-----CCCceeEEEecccCccccc--------CHHHHHHHHHHhccCCcEE
Q 007641 437 ---AI-------------SAVMGTERLPF-----PGIVFDAVHCARCRVPWHI--------EGGKLLLELNRVLRPGGFF 487 (595)
Q Consensus 437 ---~~-------------~~v~d~~~LPf-----pd~sFDlV~~~~c~v~~h~--------d~~~lL~El~RvLKPGG~L 487 (595)
+. +...+...... ....||+|+|+..++.... ....+|.++.++|+|||+|
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 22 55565544221 3458999999864332221 1258999999999999999
Q ss_pred EEEe
Q 007641 488 IWSA 491 (595)
Q Consensus 488 vis~ 491 (595)
+++.
T Consensus 211 ~~~~ 214 (250)
T 1o9g_A 211 AVTD 214 (250)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9954
No 173
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.10 E-value=2.6e-10 Score=108.21 Aligned_cols=91 Identities=14% Similarity=0.204 Sum_probs=66.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC------CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC--------------
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR------GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-------------- 448 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r------~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-------------- 448 (595)
++.+|||||||+|.++.+|+++ .|+|+|+++.. ....+.+...+...++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 5779999999999999999863 58999999832 1112455566666555
Q ss_pred -----------CCCCceeEEEecccCcccc----cCH-------HHHHHHHHHhccCCcEEEEEe
Q 007641 449 -----------FPGIVFDAVHCARCRVPWH----IEG-------GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 449 -----------fpd~sFDlV~~~~c~v~~h----~d~-------~~lL~El~RvLKPGG~Lvis~ 491 (595)
+++.+||+|+|..+ +++. .+. ..+|.++.++|||||.|++..
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhHHHHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 56779999999752 2221 122 137899999999999999864
No 174
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.10 E-value=9e-10 Score=107.69 Aligned_cols=118 Identities=14% Similarity=0.118 Sum_probs=85.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
++.+|||||||+|.++..|+++ .|+++|+++.++..++...+ ..++ .+.+...+.....+++..||+|++..
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~--- 166 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLK-KFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV--- 166 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHH-HTTCCTTEEEECSCTTTSCCCTTCBSEEEECS---
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCCcEEEEEcChhhcccCCCcccEEEECC---
Confidence 5789999999999999998873 79999999988777764443 3344 34455555555433667899999853
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEE
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
.++..+|.++.++|||||+|++..+. ......+..+++.. |..+..
T Consensus 167 ---~~~~~~l~~~~~~L~~gG~l~~~~~~--------~~~~~~~~~~l~~~-f~~~~~ 212 (248)
T 2yvl_A 167 ---REPWHYLEKVHKSLMEGAPVGFLLPT--------ANQVIKLLESIENY-FGNLEV 212 (248)
T ss_dssp ---SCGGGGHHHHHHHBCTTCEEEEEESS--------HHHHHHHHHHSTTT-EEEEEE
T ss_pred ---cCHHHHHHHHHHHcCCCCEEEEEeCC--------HHHHHHHHHHHHhh-CCcceE
Confidence 14568899999999999999998753 12334555555555 765544
No 175
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.09 E-value=2.9e-10 Score=123.20 Aligned_cols=114 Identities=10% Similarity=-0.018 Sum_probs=78.8
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHH--HHHHH----HHcC--CC-ee
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEA--QVQFA----LERG--IP-AI 438 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~a--qvq~A----~erg--i~-~~ 438 (595)
.....+.+.+.. .++.+|||||||+|.++..|+.. .|+|+|+++.++..| |+..+ ...| +. +.
T Consensus 229 ~~v~~ml~~l~l----~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 229 NFLSDVYQQCQL----KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHHHHhcCC----CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 344445444432 35789999999999999999883 599999999887777 33222 2345 23 34
Q ss_pred EeecCCCCC--CC--CCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 439 SAVMGTERL--PF--PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 439 ~~v~d~~~L--Pf--pd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+...+.... +| ..+.||+|+++. +.+..+...+|.++.|+|||||+|++..
T Consensus 305 ~i~gD~~~~~~~~~~~~~~FDvIvvn~--~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 305 FSLKKSFVDNNRVAELIPQCDVILVNN--FLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EEESSCSTTCHHHHHHGGGCSEEEECC--TTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred EEEcCccccccccccccCCCCEEEEeC--ccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 444443322 22 246899999875 2234466788999999999999999874
No 176
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.09 E-value=7e-11 Score=115.12 Aligned_cols=109 Identities=10% Similarity=0.141 Sum_probs=78.9
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP 448 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP 448 (595)
+++.+..+++ +..+|||||||+|.++..++.. .|+++|+++.++..+..+ +...|+...+.+.+....
T Consensus 39 fY~~~~~~l~------~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~-~~~~g~~~~v~~~d~~~~- 110 (200)
T 3fzg_A 39 FYTYVFGNIK------HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSI-IGKLKTTIKYRFLNKESD- 110 (200)
T ss_dssp HHHHHHHHSC------CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHH-HHHSCCSSEEEEECCHHH-
T ss_pred HHHHHHhhcC------CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHH-HHhcCCCccEEEeccccc-
Confidence 3445555553 4789999999999999999653 899999999998887744 445566633333544333
Q ss_pred CCCCceeEEEecccCccccc-CHHHHHHHHHHhccCCcEEEEEe
Q 007641 449 FPGIVFDAVHCARCRVPWHI-EGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 449 fpd~sFDlV~~~~c~v~~h~-d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.+.+.||+|++.. +++++ +....+..+++.|||||+||-.-
T Consensus 111 ~~~~~~DvVLa~k--~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 111 VYKGTYDVVFLLK--MLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HTTSEEEEEEEET--CHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred CCCCCcChhhHhh--HHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 3558899999976 45555 33566779999999999998653
No 177
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.09 E-value=2.2e-09 Score=112.67 Aligned_cols=146 Identities=16% Similarity=0.128 Sum_probs=94.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCCCCCceeEEEecccC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
...+|||||||+|.++..|+++ .++.+|+ |..+..+....+ ..+.+ +.+...|....|++ .+|+|++..
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~-~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~-- 252 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFS-FQEEEQIDFQEGDFFKDPLP--EADLYILAR-- 252 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSC-C--CCSEEEEESCTTTSCCC--CCSEEEEES--
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhh-hcccCceeeecCccccCCCC--CceEEEeee--
Confidence 4679999999999999999985 4566676 444443332221 12223 44555665555555 479999987
Q ss_pred cccccCH---HHHHHHHHHhccCCcEEEEEeCCCCC--cCch-----hHH----------HHHHHHHHHHHcCCEEEEEe
Q 007641 464 VPWHIEG---GKLLLELNRVLRPGGFFIWSATPVYQ--KLPE-----DVE----------IWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 464 v~~h~d~---~~lL~El~RvLKPGG~Lvis~pp~~~--~l~e-----~i~----------~w~~le~Lak~~Gw~~v~~~ 523 (595)
++++... ..+|++++++|+|||+|+|....+-. ..+. ++. ...++..+++.+||+.+...
T Consensus 253 vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~ 332 (353)
T 4a6d_A 253 VLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK 332 (353)
T ss_dssp SGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEE
T ss_pred ecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 4444432 57899999999999999998653221 1111 111 11567889999999998876
Q ss_pred ecccCceEEEEEEeCCCh
Q 007641 524 KDTINKVGIAVYRKPTSN 541 (595)
Q Consensus 524 ~~~l~~~giaI~~KP~~~ 541 (595)
.. .....+.+-+|.+.+
T Consensus 333 ~~-~~~~~~i~ArKgt~~ 349 (353)
T 4a6d_A 333 KT-GAIYDAILARKGTHH 349 (353)
T ss_dssp CC-SSSCEEEEEECCCC-
T ss_pred Ec-CCceEEEEEEecCcc
Confidence 54 233456667776654
No 178
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.07 E-value=6.1e-10 Score=103.95 Aligned_cols=112 Identities=13% Similarity=0.046 Sum_probs=76.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhCCcEEEeCCchhHHHHHHHHHHHcC-CCeeEeecCCCCCCC---CCCceeEEEecccC
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERG-IPAISAVMGTERLPF---PGIVFDAVHCARCR 463 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r~V~giDisp~di~~aqvq~A~erg-i~~~~~v~d~~~LPf---pd~sFDlV~~~~c~ 463 (595)
+++.+|||||||. | ++|+++.|+ +.|+++. ..+.+...+...+++ ++++||+|+|.. .
T Consensus 11 ~~g~~vL~~~~g~-----------v-~vD~s~~ml-----~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~-~ 72 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------S-PVEALKGLV-----DKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGL-V 72 (176)
T ss_dssp CTTSEEEEEECTT-----------S-CHHHHHHHH-----HHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECC-S
T ss_pred CCCCEEEEecCCc-----------e-eeeCCHHHH-----HHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECC-h
Confidence 3688999999996 2 256665544 4444442 135666677777776 889999999976 2
Q ss_pred cccc-cCHHHHHHHHHHhccCCcEEEEEeCCCCCcC-chhHHHHHHHHHHHHHcCC
Q 007641 464 VPWH-IEGGKLLLELNRVLRPGGFFIWSATPVYQKL-PEDVEIWNAMSQLIKAMCW 517 (595)
Q Consensus 464 v~~h-~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l-~e~i~~w~~le~Lak~~Gw 517 (595)
++|. .+...+|++++|+|||||+|++..+...... .........+..+++.+||
T Consensus 73 l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 73 PGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred hhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 3433 4779999999999999999999754211000 0000113677888999999
No 179
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.07 E-value=7.1e-10 Score=108.76 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=75.4
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCC
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP 448 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LP 448 (595)
....+.+.+.. .++.+|||||||+|.++..|++ ..|+++|+++..+..++.... ..++. +.+...+. ..+
T Consensus 79 ~~~~~~~~l~~----~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~-~~~ 152 (235)
T 1jg1_A 79 MVAIMLEIANL----KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLE-RAGVKNVHVILGDG-SKG 152 (235)
T ss_dssp HHHHHHHHHTC----CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCG-GGC
T ss_pred HHHHHHHhcCC----CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-HcCCCCcEEEECCc-ccC
Confidence 34444444432 3577999999999999999887 479999999988777764443 34443 44444444 455
Q ss_pred CCCC-ceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 449 FPGI-VFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 449 fpd~-sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
++.. .||+|++.. ...+.. .++.++|||||+|++..++
T Consensus 153 ~~~~~~fD~Ii~~~--~~~~~~-----~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 153 FPPKAPYDVIIVTA--GAPKIP-----EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CGGGCCEEEEEECS--BBSSCC-----HHHHHTEEEEEEEEEEECS
T ss_pred CCCCCCccEEEECC--cHHHHH-----HHHHHhcCCCcEEEEEEec
Confidence 6554 499999975 333322 3789999999999998764
No 180
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.07 E-value=1.1e-09 Score=115.16 Aligned_cols=125 Identities=14% Similarity=0.102 Sum_probs=85.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++.. |++. ..+.+...+... +++. ||+|++.. +
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~-----a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~--~ 276 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIEN-----APPL-SGIEHVGGDMFA-SVPQ--GDAMILKA--V 276 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTT-----CCCC-TTEEEEECCTTT-CCCC--EEEEEEES--S
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHh-----hhhc-CCCEEEeCCccc-CCCC--CCEEEEec--c
Confidence 4689999999999999999885 4667788 654432 2221 235555666655 6665 99999987 4
Q ss_pred cccc-CHH--HHHHHHHHhccCCcEEEEEeCCCC--CcCc------hhHH------------HHHHHHHHHHHcCCEEEE
Q 007641 465 PWHI-EGG--KLLLELNRVLRPGGFFIWSATPVY--QKLP------EDVE------------IWNAMSQLIKAMCWELVS 521 (595)
Q Consensus 465 ~~h~-d~~--~lL~El~RvLKPGG~Lvis~pp~~--~~l~------e~i~------------~w~~le~Lak~~Gw~~v~ 521 (595)
++|. +.. .+|++++|+|||||+|+|...... ...+ .... ....+..+++.+||..+.
T Consensus 277 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 356 (372)
T 1fp1_D 277 CHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQ 356 (372)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEE
Confidence 4454 444 999999999999999998742111 1100 0000 125678899999999887
Q ss_pred Eeec
Q 007641 522 ISKD 525 (595)
Q Consensus 522 ~~~~ 525 (595)
....
T Consensus 357 ~~~~ 360 (372)
T 1fp1_D 357 VACR 360 (372)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7653
No 181
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.07 E-value=8.5e-10 Score=106.93 Aligned_cols=99 Identities=17% Similarity=0.154 Sum_probs=73.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHc-----CCCeeEeecCCCCCCCCCCceeEE
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALER-----GIPAISAVMGTERLPFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~er-----gi~~~~~v~d~~~LPfpd~sFDlV 457 (595)
.++.+|||||||+|.++..|+++ .|+++|+++.++..++.+..... ...+.+...+....+...+.||+|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 35789999999999999988863 69999999988877765443321 113555666665555556789999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEeCC
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
++... .. .++.++.++|||||+|++...+
T Consensus 156 ~~~~~--~~-----~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 156 HVGAA--AP-----VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EECSB--BS-----SCCHHHHHTEEEEEEEEEEESC
T ss_pred EECCc--hH-----HHHHHHHHhcCCCcEEEEEEec
Confidence 99752 22 2346889999999999998654
No 182
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.06 E-value=1.2e-09 Score=114.37 Aligned_cols=128 Identities=11% Similarity=-0.027 Sum_probs=87.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC---eeEeecCCCCCC-C---CCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP---AISAVMGTERLP-F---PGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~---~~~~v~d~~~LP-f---pd~sFDlV~~ 459 (595)
++.+|||+|||+|.++..++.+ .|+++|+++.++..++.+... .++. +.+...++..+. . ....||+|++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~-~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVL-AGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH-HTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4679999999999999999885 699999999988888765544 3443 556666654432 1 1468999999
Q ss_pred cccCcccc--------c-CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHH-HHHHHHHHHcCCEEE
Q 007641 460 ARCRVPWH--------I-EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIW-NAMSQLIKAMCWELV 520 (595)
Q Consensus 460 ~~c~v~~h--------~-d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w-~~le~Lak~~Gw~~v 520 (595)
..+.+... . +...+|..+.++|+|||+|++......... ...+ ..+...+..+|+.+.
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~---~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRAS---FYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSC---HHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCC---HHHHHHHHHHHHHHcCCeEE
Confidence 75432211 1 246899999999999999887654322211 1223 444556678888765
No 183
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.05 E-value=1.6e-09 Score=108.23 Aligned_cols=131 Identities=14% Similarity=0.065 Sum_probs=96.5
Q ss_pred HHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCC
Q 007641 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERL 447 (595)
Q Consensus 374 id~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~L 447 (595)
+..+..+++ ++.+|||||||+|.++.+|+.. .|+++|+++..+..|+.+.+ ..++. +.+...+....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~-~~gl~~~I~~~~gD~l~~ 84 (230)
T 3lec_A 12 LQKVANYVP------KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVS-EHGLTSKIDVRLANGLSA 84 (230)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHH-HTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEECchhhc
Confidence 455555554 4789999999999999999985 58999999999888876554 44443 55666666555
Q ss_pred CCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 448 PFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 448 Pfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
..+...||+|+... +.- .-...+|....+.|+++|+|++... .....+..++...||.++...-
T Consensus 85 ~~~~~~~D~IviaG--mGg-~lI~~IL~~~~~~l~~~~~lIlqp~----------~~~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 85 FEEADNIDTITICG--MGG-RLIADILNNDIDKLQHVKTLVLQPN----------NREDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp CCGGGCCCEEEEEE--ECH-HHHHHHHHHTGGGGTTCCEEEEEES----------SCHHHHHHHHHHTTEEEEEEEE
T ss_pred cccccccCEEEEeC--Cch-HHHHHHHHHHHHHhCcCCEEEEECC----------CChHHHHHHHHHCCCEEEEEEE
Confidence 54544799988654 221 1235788889999999999999842 1146788889999999988764
No 184
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.05 E-value=6.7e-10 Score=116.40 Aligned_cols=106 Identities=15% Similarity=0.095 Sum_probs=76.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH-c---CCCeeEeecCCCCC--CCCCCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTERL--PFPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e-r---gi~~~~~v~d~~~L--Pfpd~sFDlV~ 458 (595)
...+|||||||+|.++..|+++ .|+++|+++.++..++..+... . ...+.+...+.... .+++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4689999999999999999975 6999999998887777554331 1 22455666665332 23467899999
Q ss_pred ecccCccccc-C---HHHHHHHHHHhccCCcEEEEEeCCCC
Q 007641 459 CARCRVPWHI-E---GGKLLLELNRVLRPGGFFIWSATPVY 495 (595)
Q Consensus 459 ~~~c~v~~h~-d---~~~lL~El~RvLKPGG~Lvis~pp~~ 495 (595)
+.. ..+++. . ...++..+.|+|+|||+|++.....|
T Consensus 200 ~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 200 VDS-SDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp ECC-CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred ECC-CCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 864 222222 1 36899999999999999999744333
No 185
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.05 E-value=2.8e-10 Score=109.49 Aligned_cols=97 Identities=14% Similarity=0.111 Sum_probs=73.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCC-CCCCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LPFPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~-LPfpd~sFDlV~~~ 460 (595)
+..+|||||||+|.++..|+.+ .|+++|+++.++..++..+.. .++ .+.+...+... ++..++ ||+|++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHD-NGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-CCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 3579999999999999999874 799999999888777655443 333 24455555533 355456 9999986
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
. ...+...+|.++.++|||||+|++..
T Consensus 134 ~----~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 C----DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T----TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C----ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 3 23356799999999999999999864
No 186
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.05 E-value=2.8e-10 Score=110.05 Aligned_cols=99 Identities=14% Similarity=0.098 Sum_probs=73.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCC-CCCC-C----CCcee
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE-RLPF-P----GIVFD 455 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~-~LPf-p----d~sFD 455 (595)
++.+|||||||+|.++.+|+.+ .|+++|+++.++..++..+. ..++. +.+...+.. .++. . .++||
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWE-KAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHH-HCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 3679999999999999999874 69999999988877764443 44443 555565542 2221 1 17899
Q ss_pred EEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 456 lV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+|++.. +......+|..+.++|||||+|++...
T Consensus 143 ~v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 143 LIYIDA----DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEECC----CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999754 233567899999999999999998754
No 187
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.05 E-value=2.4e-09 Score=110.96 Aligned_cols=99 Identities=17% Similarity=0.136 Sum_probs=71.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHc-----------CCCeeEeecCCCCC--CC
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALER-----------GIPAISAVMGTERL--PF 449 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~er-----------gi~~~~~v~d~~~L--Pf 449 (595)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++.+..... ...+.+...+...+ ++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 35789999999999999988873 59999999998888776554321 12355666666555 56
Q ss_pred CCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+++.||+|++.. . .+..+|.++.++|||||+|++..+
T Consensus 184 ~~~~fD~V~~~~-~-----~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 184 KSLTFDAVALDM-L-----NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ----EEEEEECS-S-----STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCCCeeEEEECC-C-----CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 777899999863 1 233489999999999999998764
No 188
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.04 E-value=9.2e-10 Score=109.60 Aligned_cols=99 Identities=13% Similarity=-0.002 Sum_probs=74.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCC-CCCC-----CCcee
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LPFP-----GIVFD 455 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~-LPfp-----d~sFD 455 (595)
+..+|||||||+|.++..|+.. .|+++|+++.++..++..+. ..++ .+.+...++.. ++.. .++||
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWR-EAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHH-HTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 3679999999999999999873 69999999998877765443 4454 35556666533 3321 47899
Q ss_pred EEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 456 lV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+|++.. ...+...+|.++.++|||||+|++...
T Consensus 139 ~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 139 FIFIDA----DKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEES----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEEcC----ChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 999864 233557899999999999999998643
No 189
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.04 E-value=1.7e-10 Score=123.78 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=72.1
Q ss_pred CCCEEEEECCC------CchhHHHHhh-----CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCC------C
Q 007641 389 RTRVVLDVGCG------VASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP------G 451 (595)
Q Consensus 389 ~~~rVLDIGCG------tG~~a~~La~-----r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfp------d 451 (595)
+..+||||||| +|..+..|+. ..|+|+|+++.+. .....+.+.+.+...+||. +
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 46899999999 6666655554 2799999999862 1234567778888888887 7
Q ss_pred CceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 452 IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 452 ~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
++||+|+|.. .++..+...+|.+++|+|||||+|+|..
T Consensus 287 ~sFDlVisdg--sH~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 287 GPFDIVIDDG--SHINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp CCEEEEEECS--CCCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccEEEECC--cccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 8999999964 3444466899999999999999999974
No 190
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.04 E-value=9.3e-10 Score=107.20 Aligned_cols=97 Identities=15% Similarity=0.233 Sum_probs=71.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----------CcEEEeCCchhHHHHHHHHHHHc-----CCCeeEeecCCCCCCCCC-
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----------GVLTMSFAPKDEHEAQVQFALER-----GIPAISAVMGTERLPFPG- 451 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----------~V~giDisp~di~~aqvq~A~er-----gi~~~~~v~d~~~LPfpd- 451 (595)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++.+..... ...+.+...+... +++.
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPN 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcC
Confidence 35789999999999999888762 69999999988877765544322 1234555555544 5554
Q ss_pred CceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 452 IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 452 ~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+.||+|++.. ..++ ++.++.++|||||+|++...
T Consensus 162 ~~fD~I~~~~--~~~~-----~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGA--AAPD-----TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECS--CBSS-----CCHHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECC--chHH-----HHHHHHHHhcCCCEEEEEEe
Confidence 7899999975 2223 23789999999999999864
No 191
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.04 E-value=1.7e-09 Score=108.81 Aligned_cols=131 Identities=12% Similarity=0.014 Sum_probs=94.8
Q ss_pred HHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCCC
Q 007641 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTERL 447 (595)
Q Consensus 374 id~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~L 447 (595)
+..+..+++ ++.+|||||||+|.++.+|+.. .|+++|+++..+..|+.+.+ ..++. +.+...+....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~-~~gl~~~I~v~~gD~l~~ 84 (244)
T 3gnl_A 12 LEKVASYIT------KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVR-SSGLTEQIDVRKGNGLAV 84 (244)
T ss_dssp HHHHHTTCC------SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH-HTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEEecchhhc
Confidence 445555554 4789999999999999999985 58999999999888875544 44553 45556665554
Q ss_pred CCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 448 PFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 448 Pfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
..+...||+|++.. +.- .-...+|.+..+.|+++|+||+... .....+..++...||.++...-
T Consensus 85 ~~~~~~~D~Iviag--mGg-~lI~~IL~~~~~~L~~~~~lIlq~~----------~~~~~lr~~L~~~Gf~i~~E~l 148 (244)
T 3gnl_A 85 IEKKDAIDTIVIAG--MGG-TLIRTILEEGAAKLAGVTKLILQPN----------IAAWQLREWSEQNNWLITSEAI 148 (244)
T ss_dssp CCGGGCCCEEEEEE--ECH-HHHHHHHHHTGGGGTTCCEEEEEES----------SCHHHHHHHHHHHTEEEEEEEE
T ss_pred cCccccccEEEEeC--Cch-HHHHHHHHHHHHHhCCCCEEEEEcC----------CChHHHHHHHHHCCCEEEEEEE
Confidence 44434699998754 211 1135788899999999999999842 1245778889999999877653
No 192
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.04 E-value=2e-09 Score=107.16 Aligned_cols=130 Identities=13% Similarity=0.074 Sum_probs=92.9
Q ss_pred HHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCC-CC
Q 007641 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT-ER 446 (595)
Q Consensus 374 id~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~-~~ 446 (595)
+..+..+++ ++.+|||||||+|.++..|+.. .|+++|+++..+..|+.+. ...++. +.+...+. ..
T Consensus 6 L~~l~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~-~~~gl~~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 6 LELVASFVS------QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNV-EAHGLKEKIQVRLANGLAA 78 (225)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH-HHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEEECchhhh
Confidence 344555554 4789999999999999999985 5999999999888887554 445553 44555554 34
Q ss_pred CCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 447 LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
++.. ..||+|+... +.- .-...+|..+...|+|+|+|++... .....+..++...||.++...-
T Consensus 79 l~~~-~~~D~IviaG--~Gg-~~i~~Il~~~~~~L~~~~~lVlq~~----------~~~~~vr~~L~~~Gf~i~~e~l 142 (225)
T 3kr9_A 79 FEET-DQVSVITIAG--MGG-RLIARILEEGLGKLANVERLILQPN----------NREDDLRIWLQDHGFQIVAESI 142 (225)
T ss_dssp CCGG-GCCCEEEEEE--ECH-HHHHHHHHHTGGGCTTCCEEEEEES----------SCHHHHHHHHHHTTEEEEEEEE
T ss_pred cccC-cCCCEEEEcC--CCh-HHHHHHHHHHHHHhCCCCEEEEECC----------CCHHHHHHHHHHCCCEEEEEEE
Confidence 4321 2699998754 211 1136889999999999999999742 1235778889999999988763
No 193
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.03 E-value=3.5e-10 Score=109.73 Aligned_cols=97 Identities=14% Similarity=0.025 Sum_probs=72.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC---------CcEEEeCCchhHHHHHHHHHHHc-----CCCeeEeecCCCCCC----CC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---------GVLTMSFAPKDEHEAQVQFALER-----GIPAISAVMGTERLP----FP 450 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---------~V~giDisp~di~~aqvq~A~er-----gi~~~~~v~d~~~LP----fp 450 (595)
++.+|||||||+|.++..|+.. .|+++|+++.++..++....... ...+.+...+....+ +.
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 5789999999999999988873 69999999988877765544332 124556666665554 45
Q ss_pred CCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 451 GIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 451 d~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.+.||+|++.. ...+ ++.++.++|||||+|++..+
T Consensus 160 ~~~fD~I~~~~--~~~~-----~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGA--SASE-----LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECS--BBSS-----CCHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECC--chHH-----HHHHHHHhcCCCcEEEEEEc
Confidence 67899999975 2222 35788999999999999864
No 194
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.03 E-value=2.9e-09 Score=102.98 Aligned_cols=99 Identities=15% Similarity=0.077 Sum_probs=73.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC-CC-CC---CCceeE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LP-FP---GIVFDA 456 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~-LP-fp---d~sFDl 456 (595)
++.+|||||||+|.++.+|+++ .|+++|+++.++..++..+. ..++. +.+...+... ++ ++ .+.||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIE-RANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 4679999999999999999885 69999999988877765443 34442 4555665432 22 11 157999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
|++... ......+|.++.++|||||+|++...
T Consensus 137 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 137 IFIDAD----KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEECSC----GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 998641 23457899999999999999888754
No 195
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.02 E-value=2.3e-09 Score=116.28 Aligned_cols=128 Identities=16% Similarity=0.213 Sum_probs=88.1
Q ss_pred CCCCEEEEECCCCchhHHHHhh-----CCcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCC--CCCCceeEEEe
Q 007641 388 KRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLP--FPGIVFDAVHC 459 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~-----r~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LP--fpd~sFDlV~~ 459 (595)
.++.+|||+|||+|..+.+|+. ..|+++|+++..+..+..+ +...|+ .+.+...+...++ ++++.||+|++
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~-~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDF-VKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHH-HHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHH-HHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 3578999999999999999987 2699999998877666543 334466 3555666666665 66678999996
Q ss_pred cc-----cCcccccCH----------------HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHc-CC
Q 007641 460 AR-----CRVPWHIEG----------------GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAM-CW 517 (595)
Q Consensus 460 ~~-----c~v~~h~d~----------------~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~-Gw 517 (595)
.. ..+..+.+. ..+|..+.++|||||+|++++..+... + .-..+..++... +|
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~--e---ne~~v~~~l~~~~~~ 411 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE--E---NEKNIRWFLNVHPEF 411 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG--G---THHHHHHHHHHCSSC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh--h---HHHHHHHHHHhCCCC
Confidence 32 122222221 478999999999999999886544322 1 123555666665 68
Q ss_pred EEEE
Q 007641 518 ELVS 521 (595)
Q Consensus 518 ~~v~ 521 (595)
.++.
T Consensus 412 ~~~~ 415 (450)
T 2yxl_A 412 KLVP 415 (450)
T ss_dssp EECC
T ss_pred EEee
Confidence 7654
No 196
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.02 E-value=3.5e-10 Score=112.20 Aligned_cols=117 Identities=10% Similarity=0.056 Sum_probs=80.8
Q ss_pred CCEEEEECCCCchhHHHHhhC--------CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC---CCCCC-CceeEE
Q 007641 390 TRVVLDVGCGVASFGGFLFDR--------GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---LPFPG-IVFDAV 457 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r--------~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~---LPfpd-~sFDlV 457 (595)
+.+|||||||+|.++..|++. .|+++|+++.++..++ .....+.+...+... +++.. .+||+|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 579999999999999888753 6999999998765543 223345666666655 35443 379999
Q ss_pred EecccCcccccCHHHHHHHHHH-hccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHc--CCEE
Q 007641 458 HCARCRVPWHIEGGKLLLELNR-VLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAM--CWEL 519 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~R-vLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~--Gw~~ 519 (595)
++.. . |.+...+|.++.| +|||||+|++.....+. +. ..-..+..+++.. +|..
T Consensus 157 ~~d~--~--~~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~--~~--~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 157 FIDN--A--HANTFNIMKWAVDHLLEEGDYFIIEDMIPYW--YR--YAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp EEES--S--CSSHHHHHHHHHHHTCCTTCEEEECSCHHHH--HH--HCHHHHHHHHHTTTTTEEE
T ss_pred EECC--c--hHhHHHHHHHHHHhhCCCCCEEEEEeCcccc--cc--cCHHHHHHHHHhCcccEEE
Confidence 9864 2 4467889999998 99999999986430000 00 0013666777776 5654
No 197
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.00 E-value=9.7e-10 Score=103.66 Aligned_cols=93 Identities=18% Similarity=0.135 Sum_probs=64.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC-------------CcEEEeCCchhHHHHHHHHHHHcCCCeeEe-ecCCCCCC------
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-------------GVLTMSFAPKDEHEAQVQFALERGIPAISA-VMGTERLP------ 448 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-------------~V~giDisp~di~~aqvq~A~ergi~~~~~-v~d~~~LP------ 448 (595)
++.+|||||||+|.++..|+++ .|+++|+++... ...+.+. ..+....+
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----------~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----------LEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----------CTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-----------CCCCeEEEeccCCCHHHHHHHH
Confidence 5789999999999999999874 389999997420 1123344 44443322
Q ss_pred --CCCCceeEEEecccC---cccccCH-------HHHHHHHHHhccCCcEEEEEeC
Q 007641 449 --FPGIVFDAVHCARCR---VPWHIEG-------GKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 449 --fpd~sFDlV~~~~c~---v~~h~d~-------~~lL~El~RvLKPGG~Lvis~p 492 (595)
+++++||+|+|..+. .++..+. ..+|.++.|+|||||+|++...
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 345689999986421 1111222 3789999999999999999853
No 198
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.00 E-value=9.4e-09 Score=98.03 Aligned_cols=121 Identities=10% Similarity=-0.033 Sum_probs=85.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||+|||+|.++..|+.+ .|+|+|+++.++..++.+. ...++.+.+...+...++ ..||+|+++.++..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENL-GEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHT-GGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH-HHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc
Confidence 5789999999999999999885 5999999988876665433 233445667777776664 48999999874333
Q ss_pred ccc-CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 466 WHI-EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 466 ~h~-d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
... ....+|..+.++| ||.+++..++ ......+..++...||.+....
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~~~~~--------~~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSIHLAK--------PEVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEEEECC--------HHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEEEeCC--------cCCHHHHHHHHHHCCCeEEEEE
Confidence 221 2368899999999 6655554211 1334567778889999875543
No 199
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.99 E-value=2.3e-09 Score=111.71 Aligned_cols=124 Identities=12% Similarity=0.094 Sum_probs=85.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++..+ ++. ..+.+...+... ++|. ||+|++.. +
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-----~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~--~ 255 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENL-----SGS-NNLTYVGGDMFT-SIPN--ADAVLLKY--I 255 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTC-----CCB-TTEEEEECCTTT-CCCC--CSEEEEES--C
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhc-----ccC-CCcEEEeccccC-CCCC--ccEEEeeh--h
Confidence 4689999999999999999874 5899999 7654332 222 125555566544 6663 99999987 4
Q ss_pred cccc-CHH--HHHHHHHHhccC---CcEEEEEeCCCCCc--C---chh---HH-----------HHHHHHHHHHHcCCEE
Q 007641 465 PWHI-EGG--KLLLELNRVLRP---GGFFIWSATPVYQK--L---PED---VE-----------IWNAMSQLIKAMCWEL 519 (595)
Q Consensus 465 ~~h~-d~~--~lL~El~RvLKP---GG~Lvis~pp~~~~--l---~e~---i~-----------~w~~le~Lak~~Gw~~ 519 (595)
++|. +.. .+|++++|+||| ||+|+|........ . ... .. ....+..+++.+||..
T Consensus 256 lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~ 335 (352)
T 1fp2_A 256 LHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQH 335 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCE
T ss_pred hccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCe
Confidence 4444 344 999999999999 99999986432111 0 000 00 1257788999999998
Q ss_pred EEEee
Q 007641 520 VSISK 524 (595)
Q Consensus 520 v~~~~ 524 (595)
+....
T Consensus 336 ~~~~~ 340 (352)
T 1fp2_A 336 YKISP 340 (352)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 87654
No 200
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.99 E-value=7.8e-10 Score=108.02 Aligned_cols=98 Identities=11% Similarity=0.127 Sum_probs=73.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCC-CCCC--CCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LPFP--GIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~-LPfp--d~sFDlV~~ 459 (595)
++.+|||||||+|.++..|++. .|+++|+++..+..++..+. ..++ .+.+...+... ++.. ++.||+|++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVK-ALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH-HTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 4679999999999999998874 69999999988777764443 3344 24555555544 2433 578999998
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
... ..+...+|..+.++|||||+|++..
T Consensus 133 ~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAA----KGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGG----GSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 652 1256799999999999999999873
No 201
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.98 E-value=5.8e-09 Score=110.21 Aligned_cols=126 Identities=10% Similarity=0.026 Sum_probs=90.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCC-CCC-CCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTER-LPF-PGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~-LPf-pd~sFDlV~~~~ 461 (595)
++.+||||| |+|.++..++.+ .|+++|+++.++..++.+. ...++ .+.+...+... +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~-~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAA-NEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHH-HHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 478999999 999999988764 6999999999888776544 34455 45666677666 664 457899999986
Q ss_pred cCcccccCHHHHHHHHHHhccCCcEE-EEEeCCCCCcCchhHHHHHHHHHHHH-HcCCEEEEE
Q 007641 462 CRVPWHIEGGKLLLELNRVLRPGGFF-IWSATPVYQKLPEDVEIWNAMSQLIK-AMCWELVSI 522 (595)
Q Consensus 462 c~v~~h~d~~~lL~El~RvLKPGG~L-vis~pp~~~~l~e~i~~w~~le~Lak-~~Gw~~v~~ 522 (595)
++... ....+|.++.++|||||.+ +++... .......|..+..++. ..||.....
T Consensus 250 p~~~~--~~~~~l~~~~~~LkpgG~~~~~~~~~----~~~~~~~~~~~~~~l~~~~g~~~~~~ 306 (373)
T 2qm3_A 250 PETLE--AIRAFVGRGIATLKGPRCAGYFGITR----RESSLDKWREIQKLLLNEFNVVITDI 306 (373)
T ss_dssp CSSHH--HHHHHHHHHHHTBCSTTCEEEEEECT----TTCCHHHHHHHHHHHHHTSCCEEEEE
T ss_pred CCchH--HHHHHHHHHHHHcccCCeEEEEEEec----CcCCHHHHHHHHHHHHHhcCcchhhh
Confidence 32222 3578999999999999943 555322 1122334567777777 899887554
No 202
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.98 E-value=2.1e-09 Score=115.78 Aligned_cols=128 Identities=13% Similarity=0.168 Sum_probs=89.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC--CCCCceeEEEecc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP--FPGIVFDAVHCAR 461 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP--fpd~sFDlV~~~~ 461 (595)
.++.+|||+|||+|..+.+|+.. .|+++|+++..+..++.+ +...++.+.+...+...++ ++++.||+|++..
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~-~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN-LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHH-HHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-HHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 45789999999999999999873 699999999988777644 3445666667777776665 5667899999633
Q ss_pred -c----CcccccCH----------------HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHc-CCEE
Q 007641 462 -C----RVPWHIEG----------------GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAM-CWEL 519 (595)
Q Consensus 462 -c----~v~~h~d~----------------~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~-Gw~~ 519 (595)
| .+..+.+. ..+|..+.++|||||+|++++..++.. ++ -..+..++... +|.+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~--en---e~~v~~~l~~~~~~~~ 398 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE--EN---SLQIKAFLQRTADAEL 398 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHCTTCEE
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh--hH---HHHHHHHHHhCCCCEE
Confidence 1 11112221 378999999999999999987544332 11 13445555554 5765
Q ss_pred EE
Q 007641 520 VS 521 (595)
Q Consensus 520 v~ 521 (595)
+.
T Consensus 399 ~~ 400 (429)
T 1sqg_A 399 CE 400 (429)
T ss_dssp CS
T ss_pred eC
Confidence 43
No 203
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.98 E-value=9.8e-10 Score=120.47 Aligned_cols=99 Identities=16% Similarity=0.238 Sum_probs=72.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEecccC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
++.+|||||||+|.++..++++ .|+++|+++ ++..++ +.+...++ .+.+...+...++++ +.||+|++....
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~-~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHH-HHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCch
Confidence 4689999999999999999875 689999987 665554 33444555 356666777777766 589999997521
Q ss_pred cccc-cCHHHHHHHHHHhccCCcEEEEE
Q 007641 464 VPWH-IEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 464 v~~h-~d~~~lL~El~RvLKPGG~Lvis 490 (595)
.++. .....+|..+.++|||||+|++.
T Consensus 235 ~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 235 YMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred HhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2221 12356777899999999999854
No 204
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=2.3e-09 Score=108.72 Aligned_cols=101 Identities=18% Similarity=0.170 Sum_probs=67.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-CcEEEeCCchhHHHHHHHH-H-HHcCCCeeEe--ecCCCCCCCCCCceeEEEeccc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQF-A-LERGIPAISA--VMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-~V~giDisp~di~~aqvq~-A-~ergi~~~~~--v~d~~~LPfpd~sFDlV~~~~c 462 (595)
.++.+|||||||+|.++.+|+++ .|+|+|+++ ++..+.... . ...+..+.+. ..++..+| +.+||+|+|...
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~ 149 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG 149 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc
Confidence 35789999999999999999885 899999998 421110000 0 0001134555 56666665 678999999753
Q ss_pred Ccccc--cCHH---HHHHHHHHhccCCc--EEEEEe
Q 007641 463 RVPWH--IEGG---KLLLELNRVLRPGG--FFIWSA 491 (595)
Q Consensus 463 ~v~~h--~d~~---~lL~El~RvLKPGG--~Lvis~ 491 (595)
.+..+ .+.. .+|..+.|+||||| .|++..
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 11101 1112 37899999999999 999865
No 205
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.96 E-value=1.3e-09 Score=112.46 Aligned_cols=103 Identities=12% Similarity=0.019 Sum_probs=73.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH-c---CCCeeEeecCCCC-CCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTER-LPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e-r---gi~~~~~v~d~~~-LPfpd~sFDlV~~ 459 (595)
...+|||||||+|.++..|+++ .|+++|+++.++..++..+..- . ...+.+...+... ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 4689999999999999999875 6999999998887776554331 1 2235555666533 4445678999998
Q ss_pred cccCccccc----CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 460 ARCRVPWHI----EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 460 ~~c~v~~h~----d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.. ..++.. ....++.++.|+|||||+|++...
T Consensus 175 d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 175 DS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EC-C-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 64 222211 225789999999999999998763
No 206
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.96 E-value=2.9e-09 Score=108.72 Aligned_cols=115 Identities=16% Similarity=0.145 Sum_probs=80.4
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCC
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~ 445 (595)
..+++.+...+.. .++.+|||||||+|.++..|+.. .|+++|+++.++..++.+. ...++. +.+...+..
T Consensus 109 e~lv~~~l~~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~-~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 109 EELVELALELIRK----YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNA-ERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp HHHHHHHHHHHHH----HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHH-HHTTCTTSEEEEESSTT
T ss_pred HHHHHHHHHHhcc----cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCceEEEECcch
Confidence 3455555554432 13579999999999999999864 7999999999888776544 344554 556666654
Q ss_pred CCCCCCCce---eEEEecccCcccc---------c---------CHHHHHHHHH-HhccCCcEEEEEeC
Q 007641 446 RLPFPGIVF---DAVHCARCRVPWH---------I---------EGGKLLLELN-RVLRPGGFFIWSAT 492 (595)
Q Consensus 446 ~LPfpd~sF---DlV~~~~c~v~~h---------~---------d~~~lL~El~-RvLKPGG~Lvis~p 492 (595)
. +++ +.| |+|+++.+++... . +...+++++. ++|+|||+|++...
T Consensus 184 ~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 184 E-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp G-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred h-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 4 233 478 9999985444211 1 1127899999 99999999998754
No 207
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.96 E-value=2.9e-09 Score=101.38 Aligned_cols=111 Identities=10% Similarity=0.011 Sum_probs=74.9
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.+.. .+.+...+...+| ++||+|+++.++.+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC---CCEEEEEECCCC--
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC---CCeeEEEECCCchh
Confidence 4789999999999999999885 59999999876655543321 4566677776665 68999999864322
Q ss_pred ccc-CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEE
Q 007641 466 WHI-EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELV 520 (595)
Q Consensus 466 ~h~-d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v 520 (595)
+.. ....++.++.++| |+.+++..+ ..+..+..++...| ...
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~~~~~~~~----------~~~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MWIYSIGNA----------KARDFLRREFSARG-DVF 165 (200)
T ss_dssp -----CHHHHHHHHHHE--EEEEEEEEG----------GGHHHHHHHHHHHE-EEE
T ss_pred ccCchhHHHHHHHHHhc--CcEEEEEcC----------chHHHHHHHHHHCC-CEE
Confidence 221 1257899999999 554444321 12345666777778 543
No 208
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.96 E-value=2.5e-09 Score=113.99 Aligned_cols=112 Identities=19% Similarity=0.170 Sum_probs=78.8
Q ss_pred HHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCC
Q 007641 371 LHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTE 445 (595)
Q Consensus 371 ~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~ 445 (595)
..|.+.|.+....+ ++.+|||||||+|.++.+++++ .|+++|.++ ++..|+ +.++..++. +.++..+.+
T Consensus 69 ~aY~~Ai~~~~~~~----~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~-~~~~~n~~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 69 DAYRLGILRNWAAL----RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR-EVVRFNGLEDRVHVLPGPVE 142 (376)
T ss_dssp HHHHHHHHTTHHHH----TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHH-HHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhCHHhc----CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHH-HHHHHcCCCceEEEEeeeee
Confidence 34556665433221 4789999999999999888875 699999986 555554 455555654 555666677
Q ss_pred CCCCCCCceeEEEecc--cCcccccCHHHHHHHHHHhccCCcEEEE
Q 007641 446 RLPFPGIVFDAVHCAR--CRVPWHIEGGKLLLELNRVLRPGGFFIW 489 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~--c~v~~h~d~~~lL~El~RvLKPGG~Lvi 489 (595)
.+.+| ..||+|++-. ..+++......++....|+|||||.++.
T Consensus 143 ~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 143 TVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred eecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 77776 6799999843 1122222457889999999999999884
No 209
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.96 E-value=7.7e-09 Score=101.60 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=72.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC-CC------------
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LP------------ 448 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~-LP------------ 448 (595)
++.+|||||||+|.++..|+.+ .|+++|+++..+..++..+. ..++. +.+...+... ++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWK-ENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 4679999999999999998864 69999999988777764443 34443 4445554322 22
Q ss_pred --CCC--CceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 449 --FPG--IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 449 --fpd--~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|++ +.||+|++... ......+|..+.++|||||+|++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 343 78999998641 2245689999999999999999874
No 210
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.96 E-value=1.5e-09 Score=104.34 Aligned_cols=93 Identities=13% Similarity=0.116 Sum_probs=65.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC--------C---CCce
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF--------P---GIVF 454 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf--------p---d~sF 454 (595)
.++.+|||||||+|.++.+|+++ .|+|+|+++... ...+.+...|....+. . .+.|
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-----------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 92 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE-----------IAGVRFIRCDIFKETIFDDIDRALREEGIEKV 92 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC-----------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSE
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc-----------CCCeEEEEccccCHHHHHHHHHHhhcccCCcc
Confidence 35889999999999999999985 799999997521 1234556666655442 1 1389
Q ss_pred eEEEecccCc---ccccC-------HHHHHHHHHHhccCCcEEEEEe
Q 007641 455 DAVHCARCRV---PWHIE-------GGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 455 DlV~~~~c~v---~~h~d-------~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+|+|..... .+..+ ...+|..+.++|||||.|++..
T Consensus 93 D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 93 DDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9999964110 01111 1467889999999999999865
No 211
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.95 E-value=2.4e-09 Score=108.29 Aligned_cols=127 Identities=12% Similarity=0.125 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCCchhHHHHhh-----CCcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCC----CCCceeEE
Q 007641 388 KRTRVVLDVGCGVASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPF----PGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~-----r~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPf----pd~sFDlV 457 (595)
.++.+|||+|||+|.++.+|+. ..|+++|+++..+..++.+ +...++ .+.+...+...++. ..+.||+|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~-~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSN-INRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHH-HHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 3578999999999999999886 3699999999887766543 344555 35556666655543 25789999
Q ss_pred EecccCcc---c--------------ccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHH-cCCEE
Q 007641 458 HCARCRVP---W--------------HIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKA-MCWEL 519 (595)
Q Consensus 458 ~~~~c~v~---~--------------h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~-~Gw~~ 519 (595)
++...... + ......+|..+.++|||||+|+++...+...-.+ ..+..+++. .+|++
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene-----~~v~~~l~~~~~~~~ 235 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENE-----EVIKYILQKRNDVEL 235 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSH-----HHHHHHHHHCSSEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhH-----HHHHHHHHhCCCcEE
Confidence 98631111 0 0133689999999999999999987544432111 234455544 35654
Q ss_pred E
Q 007641 520 V 520 (595)
Q Consensus 520 v 520 (595)
+
T Consensus 236 ~ 236 (274)
T 3ajd_A 236 I 236 (274)
T ss_dssp E
T ss_pred e
Confidence 4
No 212
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.95 E-value=2.4e-09 Score=109.35 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=67.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-CcEEEeCCchhHHHHHHHHHHHcCC-------CeeEe--ecCCCCCCCCCCceeEE
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-GVLTMSFAPKDEHEAQVQFALERGI-------PAISA--VMGTERLPFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-~V~giDisp~di~~aqvq~A~ergi-------~~~~~--v~d~~~LPfpd~sFDlV 457 (595)
.++.+|||||||+|.++..|+++ .|+|+|+++ ++.. +.+... .+.+. ..++..+| +++||+|
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~-----a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 152 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTS-----GHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTV 152 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCT-----TSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhh-----hhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEE
Confidence 35789999999999999999885 899999998 4211 111111 34555 56666665 6789999
Q ss_pred EecccCcccc--cCHH---HHHHHHHHhccCCc--EEEEEe
Q 007641 458 HCARCRVPWH--IEGG---KLLLELNRVLRPGG--FFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h--~d~~---~lL~El~RvLKPGG--~Lvis~ 491 (595)
+|....+..+ .+.. .+|.++.|+||||| .|++..
T Consensus 153 vsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 153 LCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 9975311101 1111 37899999999999 999865
No 213
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.94 E-value=2.3e-10 Score=127.65 Aligned_cols=117 Identities=18% Similarity=0.096 Sum_probs=85.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcC-CCeeEeecCCCCC--CCCCCceeEEEecccC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERG-IPAISAVMGTERL--PFPGIVFDAVHCARCR 463 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~erg-i~~~~~v~d~~~L--Pfpd~sFDlV~~~~c~ 463 (595)
++.+|||||||.|.++..|+++ .|+|||+++.++..|+. .|.+.+ +.+.+.+.+++.+ ++.++.||+|+|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e-- 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRA-LAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS-- 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES--
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHH-HHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc--
Confidence 3679999999999999999996 89999999999888864 455555 5677777777776 56778999999987
Q ss_pred ccccc-CHH--HHHHHHHHhccCCcEEEEEeC----CCCCcCchhHHHHHHH
Q 007641 464 VPWHI-EGG--KLLLELNRVLRPGGFFIWSAT----PVYQKLPEDVEIWNAM 508 (595)
Q Consensus 464 v~~h~-d~~--~lL~El~RvLKPGG~Lvis~p----p~~~~l~e~i~~w~~l 508 (595)
+++|+ ++. ..+..+.+.|+++|..++..- .+..+++...+.|..+
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~ 194 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKEEPFYWGVSQPDDPREL 194 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTTSSSGGGGGSCSSGGGG
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEeccccccccccCCCCccHHHh
Confidence 66676 332 334567777888886665532 2344555555555443
No 214
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.94 E-value=6.6e-10 Score=115.88 Aligned_cols=101 Identities=13% Similarity=0.165 Sum_probs=72.2
Q ss_pred CEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC--CCCCCceeEEEecccCc
Q 007641 391 RVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL--PFPGIVFDAVHCARCRV 464 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L--Pfpd~sFDlV~~~~c~v 464 (595)
.+|||||||+|.++.+|+++ .|+++||++.++..++..+.......+.+.+.|...+ .+++++||+|++.. +.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~-~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV-FA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC-ST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC-CC
Confidence 49999999999999999882 6899999988766655433221122355666665332 34568899999863 22
Q ss_pred c----cccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 465 P----WHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 465 ~----~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+ .++....+++.++|+|+|||+|++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2 223347899999999999999998753
No 215
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.93 E-value=1.6e-09 Score=108.13 Aligned_cols=98 Identities=9% Similarity=-0.036 Sum_probs=73.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCC-CCC------CCCce
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTER-LPF------PGIVF 454 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~-LPf------pd~sF 454 (595)
+..+|||||||+|.++..|+.+ .|+++|+++.++..++..+. ..++ .+.+...+... ++. +.++|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~-~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIK-KAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3579999999999999998873 69999999998877765443 3454 24455555432 332 15789
Q ss_pred eEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 455 DAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 455 DlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+|++.. ...+...+|..+.++|||||+|++..
T Consensus 158 D~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDA----DKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECS----CSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcC----chHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9999864 13356789999999999999999864
No 216
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.92 E-value=1.1e-09 Score=113.36 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=65.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-CcEEEeC----CchhHHHHHHHHHHHcCCCeeE-eec-CCCCCCCCCCceeEEEec
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-GVLTMSF----APKDEHEAQVQFALERGIPAIS-AVM-GTERLPFPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-~V~giDi----sp~di~~aqvq~A~ergi~~~~-~v~-d~~~LPfpd~sFDlV~~~ 460 (595)
.++.+|||||||+|.++.+|+++ .|+++|+ ++.++... . ....+.+.+. ... +...+| ..+||+|+|.
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~--~-~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd 155 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPI--P-MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCD 155 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC--C-CCSTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHH--H-hhhcCCCCeEEEeccccccCC--cCCCCEEEEC
Confidence 35789999999999999999986 7999999 44322110 0 0111223333 333 444444 5689999996
Q ss_pred ccCc--ccccCHH---HHHHHHHHhccCCcEEEEEeC
Q 007641 461 RCRV--PWHIEGG---KLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 461 ~c~v--~~h~d~~---~lL~El~RvLKPGG~Lvis~p 492 (595)
.... ++..+.. .+|..+.|+|||||.|++...
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 5321 1112222 578899999999999998653
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.92 E-value=1.2e-09 Score=113.53 Aligned_cols=104 Identities=13% Similarity=-0.008 Sum_probs=70.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH----cCCCeeEeecCCCC-CCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE----RGIPAISAVMGTER-LPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e----rgi~~~~~v~d~~~-LPfpd~sFDlV~~ 459 (595)
...+|||||||+|.++..|+++ .|+++|+++.++..++..+... ....+.+...+... ++...++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4679999999999999999875 6999999988776665443211 01234555555433 3335678999998
Q ss_pred cccCcccccC----HHHHHHHHHHhccCCcEEEEEeCC
Q 007641 460 ARCRVPWHIE----GGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 460 ~~c~v~~h~d----~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
.. ..++... ...++..+.++|+|||+|++....
T Consensus 188 d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 188 DS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp CC-C-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 64 2222211 168899999999999999997543
No 218
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.91 E-value=1.4e-08 Score=108.08 Aligned_cols=126 Identities=12% Similarity=0.079 Sum_probs=88.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC---CeeEeecCCCC-CCC---CCCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI---PAISAVMGTER-LPF---PGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi---~~~~~v~d~~~-LPf---pd~sFDlV~ 458 (595)
++.+|||+|||+|.++..++.+ .|+++|+++.++..++.+.. ..++ .+.+...++.. ++. ....||+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~-~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFE-ANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHH-HTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-HcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 4689999999999999999983 69999999999988875544 4454 35566666533 321 245899999
Q ss_pred ecccCcc----cccCH----HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCE
Q 007641 459 CARCRVP----WHIEG----GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWE 518 (595)
Q Consensus 459 ~~~c~v~----~h~d~----~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~ 518 (595)
+..+.+. ...+. ..++..+.++|+|||+|+++..+... .. -..+..+...+...|+.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~--~~-~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM--TV-SQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS--CH-HHHHHHHHHHHTTCCCE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC--CH-HHHHHHHHHHHHHcCCc
Confidence 9764431 12222 45778889999999999998654322 11 12346666777888887
No 219
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.91 E-value=2.9e-09 Score=109.36 Aligned_cols=103 Identities=12% Similarity=0.023 Sum_probs=73.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH-c---CCCeeEeecCCCC-CCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTER-LPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e-r---gi~~~~~v~d~~~-LPfpd~sFDlV~~ 459 (595)
...+|||||||+|.++..++++ .|+++|+++.++..++..+..- . ...+.+...|... ++...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 3589999999999999999875 6899999998887776554321 1 2235555666433 4444678999998
Q ss_pred cccCcccc-----cCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 460 ARCRVPWH-----IEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 460 ~~c~v~~h-----~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.. ..++. .....++..+.++|+|||+|++...
T Consensus 170 d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 170 DS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 53 11211 1236899999999999999999754
No 220
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.91 E-value=9.6e-09 Score=104.38 Aligned_cols=127 Identities=11% Similarity=0.068 Sum_probs=85.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH-cC---CCeeEeecCCCC-CCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-RG---IPAISAVMGTER-LPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e-rg---i~~~~~v~d~~~-LPfpd~sFDlV~~ 459 (595)
...+|||||||+|.++..++++ .|+++|+++.++..++..+..- .+ ..+.+...+... ++...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4689999999999999999875 6999999998887776554321 11 234556666533 4444578999999
Q ss_pred cccCccccc----CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEE
Q 007641 460 ARCRVPWHI----EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVS 521 (595)
Q Consensus 460 ~~c~v~~h~----d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~ 521 (595)
.. ..++.. ....++..+.|+|+|||+|++.....+. .......+.+.++.. |..+.
T Consensus 155 d~-~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~----~~~~~~~~~~~l~~~-F~~v~ 214 (275)
T 1iy9_A 155 DS-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF----TPELITNVQRDVKEI-FPITK 214 (275)
T ss_dssp SC-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT----CHHHHHHHHHHHHTT-CSEEE
T ss_pred CC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc----cHHHHHHHHHHHHHh-CCCeE
Confidence 64 222211 2368999999999999999997533221 123445555566665 54444
No 221
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.90 E-value=2.6e-09 Score=105.08 Aligned_cols=99 Identities=14% Similarity=0.104 Sum_probs=73.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCC----CCCCCCC--Ccee
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGT----ERLPFPG--IVFD 455 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~----~~LPfpd--~sFD 455 (595)
+..+|||||||+|.++..|+.. .|+++|+++..+..++..+.. .++. +.+...+. ..+++.+ ++||
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQK-AGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 3679999999999999999874 699999999888777654433 3442 44555553 2344444 7899
Q ss_pred EEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 456 lV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+|++... ..+...++.++.++|||||+|++...
T Consensus 151 ~V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 151 LIFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 9998641 23557899999999999999998743
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.90 E-value=1.8e-09 Score=110.11 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=72.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH----cCCCeeEeecCCCC-CCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE----RGIPAISAVMGTER-LPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e----rgi~~~~~v~d~~~-LPfpd~sFDlV~~ 459 (595)
.+.+|||||||+|.++..++++ .|+++|+++.++..++..+... ....+.+...+... ++...++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 4689999999999999999875 6999999988776665433211 01234555565433 3333578999998
Q ss_pred cccCcccccC----HHHHHHHHHHhccCCcEEEEEeCC
Q 007641 460 ARCRVPWHIE----GGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 460 ~~c~v~~h~d----~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
.. ..++... ...++..+.++|+|||+|++....
T Consensus 158 d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 158 DS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 53 2222221 169999999999999999988543
No 223
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.90 E-value=7.8e-09 Score=105.91 Aligned_cols=148 Identities=9% Similarity=0.106 Sum_probs=97.4
Q ss_pred cCCCCccccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC
Q 007641 359 FPGGGTQFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI 435 (595)
Q Consensus 359 Fpggg~~F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi 435 (595)
+.-...+|..+...-...+...+. ++.+|||+|||+|.|+..++.+ .|+++|++|..+..++.+.. ..++
T Consensus 101 ~D~~k~~f~~~~~~er~ri~~~~~------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~-~N~v 173 (278)
T 3k6r_A 101 LDVAKIMFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIH-LNKV 173 (278)
T ss_dssp EETTTSCCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHH-HTTC
T ss_pred EeccceEEcCCcHHHHHHHHHhcC------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHH-HcCC
Confidence 333344455544444445555543 4889999999999999988874 69999999988877765544 3444
Q ss_pred C--eeEeecCCCCCCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHH
Q 007641 436 P--AISAVMGTERLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIK 513 (595)
Q Consensus 436 ~--~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak 513 (595)
. +.+...|...++ +.+.||.|++... + ....+|..+.++|||||++.+.....-..... .....+..+++
T Consensus 174 ~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p--~---~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~--~~~e~i~~~~~ 245 (278)
T 3k6r_A 174 EDRMSAYNMDNRDFP-GENIADRILMGYV--V---RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPR--EPFETFKRITK 245 (278)
T ss_dssp TTTEEEECSCTTTCC-CCSCEEEEEECCC--S---SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTT--TTHHHHHHHHH
T ss_pred CCcEEEEeCcHHHhc-cccCCCEEEECCC--C---cHHHHHHHHHHHcCCCCEEEEEeeecccccch--hHHHHHHHHHH
Confidence 3 445556666665 3478999998752 1 23467888999999999987643211111111 12356777888
Q ss_pred HcCCEEEE
Q 007641 514 AMCWELVS 521 (595)
Q Consensus 514 ~~Gw~~v~ 521 (595)
..||....
T Consensus 246 ~~g~~v~~ 253 (278)
T 3k6r_A 246 EYGYDVEK 253 (278)
T ss_dssp HTTCEEEE
T ss_pred HcCCcEEE
Confidence 99998643
No 224
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.89 E-value=7.5e-09 Score=108.09 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=84.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
+..+|||||||+|.++..|+++ .++++|+ +.++. .++.. ..+.+...+... +++ .||+|++.. +
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~--v 260 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVG-----NLTGN-ENLNFVGGDMFK-SIP--SADAVLLKW--V 260 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHS-----SCCCC-SSEEEEECCTTT-CCC--CCSEEEEES--C
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHh-----hcccC-CCcEEEeCccCC-CCC--CceEEEEcc--c
Confidence 4679999999999999999885 4788898 54432 22221 224555566555 666 399999987 4
Q ss_pred cccc-CHH--HHHHHHHHhccC---CcEEEEEeCCCCCc--Cc---h-----hHH----------HHHHHHHHHHHcCCE
Q 007641 465 PWHI-EGG--KLLLELNRVLRP---GGFFIWSATPVYQK--LP---E-----DVE----------IWNAMSQLIKAMCWE 518 (595)
Q Consensus 465 ~~h~-d~~--~lL~El~RvLKP---GG~Lvis~pp~~~~--l~---e-----~i~----------~w~~le~Lak~~Gw~ 518 (595)
+++. +.. .+|++++|+||| ||+|+|........ .+ . ++. ....+..+++.+||.
T Consensus 261 lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 340 (358)
T 1zg3_A 261 LHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFS 340 (358)
T ss_dssp GGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCC
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCC
Confidence 4444 444 999999999999 99999875422111 00 0 000 115677899999999
Q ss_pred EEEEee
Q 007641 519 LVSISK 524 (595)
Q Consensus 519 ~v~~~~ 524 (595)
.+....
T Consensus 341 ~~~~~~ 346 (358)
T 1zg3_A 341 SYKITP 346 (358)
T ss_dssp EEEEEE
T ss_pred eeEEEe
Confidence 887655
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.88 E-value=6.8e-09 Score=107.42 Aligned_cols=123 Identities=13% Similarity=0.111 Sum_probs=83.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHH-HcC----CCeeEeecCCCC-CCCCCCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFAL-ERG----IPAISAVMGTER-LPFPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~-erg----i~~~~~v~d~~~-LPfpd~sFDlV~ 458 (595)
...+|||||||+|.++..|+++ .|+++|+++.++..++..+.. ..+ ..+.+...+... ++...++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4689999999999999999875 689999999888777655432 122 235556666543 444567899999
Q ss_pred ecccCccc---cc----CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHc
Q 007641 459 CARCRVPW---HI----EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAM 515 (595)
Q Consensus 459 ~~~c~v~~---h~----d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~ 515 (595)
+.. ..++ .. ....++..+.|+|||||+|++.....+.. .......+...++..
T Consensus 157 ~d~-~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~~l~~~ 216 (314)
T 1uir_A 157 IDL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLT---HHRVHPVVHRTVREA 216 (314)
T ss_dssp EEC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC------CHHHHHHHHHHTT
T ss_pred ECC-CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcccc---CHHHHHHHHHHHHHH
Confidence 974 2232 11 13689999999999999999874332211 112344555555555
No 226
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.88 E-value=3.7e-09 Score=102.46 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=72.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCC-C-CC--C--Ccee
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL-P-FP--G--IVFD 455 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~L-P-fp--d--~sFD 455 (595)
++.+|||||||+|.++..|+.. .|+++|+++.++..++..+. ..++ .+.+...+.... + ++ . +.||
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWR-QAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4679999999999999999873 69999999998877764443 3444 345555554221 1 11 1 6899
Q ss_pred EEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 456 lV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+|++... ......++..+.++|||||+|++...
T Consensus 148 ~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9999642 33457899999999999999998743
No 227
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.88 E-value=2.4e-08 Score=106.85 Aligned_cols=125 Identities=14% Similarity=-0.044 Sum_probs=85.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC-CCCCCceeEEEecccCcc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL-PFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L-Pfpd~sFDlV~~~~c~v~ 465 (595)
++.+|||+|||+|.++.+++.. .|+++|+++.++..++.+.. ..++...+...+...+ +...+.||+|++....+.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~-~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAAL-RLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHH-HhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 4789999999999999999884 59999999999888875544 3455544556665332 222334999999764322
Q ss_pred ccc--------CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHH-HHHHHHHHHcCCE
Q 007641 466 WHI--------EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIW-NAMSQLIKAMCWE 518 (595)
Q Consensus 466 ~h~--------d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w-~~le~Lak~~Gw~ 518 (595)
... ....++..+.++|||||+|++........ ...| ..+...+...|..
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~----~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR----LEDLLEVARRAAADLGRR 350 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC----HHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC----HHHHHHHHHHHHHHhCCe
Confidence 111 22478899999999999999765432211 1233 4566667777755
No 228
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.86 E-value=1.6e-08 Score=105.48 Aligned_cols=93 Identities=13% Similarity=0.171 Sum_probs=72.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
++.+|||+|||+|.++.. +.. .|+++|+++.++..++.+.. ..++ .+.+...+...+. ..||+|++.....
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~-~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIK-LNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF 269 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEECChHHhc---CCCcEEEECCcHh
Confidence 478999999999999999 764 79999999998887775544 3444 3566666666554 7899999975221
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
...++..+.++|+|||+|++..
T Consensus 270 -----~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 270 -----AHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp -----GGGGHHHHHHHEEEEEEEEEEE
T ss_pred -----HHHHHHHHHHHcCCCCEEEEEE
Confidence 2378999999999999998864
No 229
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.85 E-value=5.8e-09 Score=113.98 Aligned_cols=128 Identities=21% Similarity=0.226 Sum_probs=86.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-CCCCceeEEEecc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-FPGIVFDAVHCAR 461 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-fpd~sFDlV~~~~ 461 (595)
.++.+|||+|||+|..+.+|+.+ .|+++|+++.++..++.+. ...|+.+.+...+...++ +..++||+|++..
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~-~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENV-ERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHH-HHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 35789999999999999999863 5999999998887776443 345666555666655554 3457899999632
Q ss_pred -c----CcccccCH----------------HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHc-CCEE
Q 007641 462 -C----RVPWHIEG----------------GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAM-CWEL 519 (595)
Q Consensus 462 -c----~v~~h~d~----------------~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~-Gw~~ 519 (595)
| .+..+.+. ..+|.++.++|||||+|++++-.+...-. -..+..+++.. +|++
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEn-----e~vv~~~l~~~~~~~l 253 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEEN-----EGVVAHFLKAHPEFRL 253 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGT-----HHHHHHHHHHCTTEEE
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcC-----HHHHHHHHHHCCCcEE
Confidence 1 11111111 57899999999999999998654333211 13455566665 5665
Q ss_pred EE
Q 007641 520 VS 521 (595)
Q Consensus 520 v~ 521 (595)
+.
T Consensus 254 ~~ 255 (464)
T 3m6w_A 254 ED 255 (464)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 230
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.85 E-value=2.7e-09 Score=111.04 Aligned_cols=122 Identities=13% Similarity=0.115 Sum_probs=80.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH-c---CCCeeEeecCCCC-CCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R---GIPAISAVMGTER-LPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e-r---gi~~~~~v~d~~~-LPfpd~sFDlV~~ 459 (595)
...+|||||||+|.++..++++ .|+++|+++.++..++..+..- . ...+.+...|... ++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4689999999999999999875 6999999988776665443210 1 1234555555433 3334578999998
Q ss_pred cccCccccc----CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHc
Q 007641 460 ARCRVPWHI----EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAM 515 (595)
Q Consensus 460 ~~c~v~~h~----d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~ 515 (595)
.. ..+++. ....++..+.++|||||+|++.....+.. ......+.+.++..
T Consensus 196 d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 196 DS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIH----VGTIKNMIGYAKKL 250 (321)
T ss_dssp EC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHTT
T ss_pred CC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC----HHHHHHHHHHHHHH
Confidence 64 222221 12689999999999999999975432221 22344455555555
No 231
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.83 E-value=5.7e-09 Score=103.23 Aligned_cols=98 Identities=10% Similarity=0.015 Sum_probs=73.0
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC--eeEeecCCCC-CC-C-----CCCce
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP--AISAVMGTER-LP-F-----PGIVF 454 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~--~~~~v~d~~~-LP-f-----pd~sF 454 (595)
+..+|||||||+|..+..|+.+ .|+++|+++.++..++..+. ..++. +.+...+... ++ + +.++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIR-KAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 3679999999999999998863 79999999988877764443 34553 4455555432 22 1 25789
Q ss_pred eEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 455 DAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 455 DlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+|++.. +......++..+.++|||||+|++..
T Consensus 149 D~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9999864 23355789999999999999999864
No 232
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.83 E-value=3.5e-09 Score=108.41 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=66.1
Q ss_pred CCCEEEEECCCC--chhHHHHhh-----CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC----CC--CCcee
Q 007641 389 RTRVVLDVGCGV--ASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP----FP--GIVFD 455 (595)
Q Consensus 389 ~~~rVLDIGCGt--G~~a~~La~-----r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP----fp--d~sFD 455 (595)
..++|||||||+ +.+...+++ ..|+++|+++.|+..++..........+.+...|+..++ .+ ...||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 468999999997 333344433 379999999988876654332111112456666665541 11 24455
Q ss_pred -----EEEecccCcccccC---HHHHHHHHHHhccCCcEEEEEe
Q 007641 456 -----AVHCARCRVPWHIE---GGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 456 -----lV~~~~c~v~~h~d---~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+|+++. .++|..+ +..+|++++++|+|||+|+|+.
T Consensus 158 ~~~p~av~~~a-vLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 158 LTRPVALTVIA-IVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TTSCCEEEEES-CGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cCCcchHHhhh-hHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 466653 3444434 4689999999999999999985
No 233
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.82 E-value=2.5e-08 Score=106.03 Aligned_cols=127 Identities=11% Similarity=0.033 Sum_probs=87.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC---CeeEeecCCCCC-C-C--CCCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI---PAISAVMGTERL-P-F--PGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi---~~~~~v~d~~~L-P-f--pd~sFDlV~ 458 (595)
++.+|||+|||+|.++.+++.+ .|+++|+++.++..++.+. ...++ .+.+...+...+ + + ....||+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~-~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNV-ELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4789999999999999999985 6999999999888776554 34565 455666665433 2 1 146899999
Q ss_pred ecccCccc-------c-cCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEE
Q 007641 459 CARCRVPW-------H-IEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 459 ~~~c~v~~-------h-~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
+..+++.. . .....++..+.++|+|||+|+++..+.... .+ .....+...+...|+..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~-~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT--SD-LFQKIIADAAIDAGRDV 364 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC--HH-HHHHHHHHHHHHHTCCE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC--HH-HHHHHHHHHHHHcCCeE
Confidence 97643221 1 133688999999999999999986543221 11 22344555777778553
No 234
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.81 E-value=1.1e-08 Score=108.34 Aligned_cols=126 Identities=15% Similarity=0.057 Sum_probs=86.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCC----CCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPF----PGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPf----pd~sFDlV~~~~ 461 (595)
++.+|||+|||+|.++..++.. .|+++|+++.++..++.+.. ..++. +.+...+...+.. ...+||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~-~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENAR-LNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHH-HTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHH-HcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 4679999999999999999874 79999999998887775544 34544 5566666543321 256899999976
Q ss_pred cCccccc--------CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCE
Q 007641 462 CRVPWHI--------EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWE 518 (595)
Q Consensus 462 c~v~~h~--------d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~ 518 (595)
+.+.... ....++..+.++|+|||+|+++..+.... .. .....+...+...|..
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~-~~~~~i~~~~~~~g~~ 349 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT--EP-LFYAMVAEAAQDAHRL 349 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC--HH-HHHHHHHHHHHHTTCC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC--HH-HHHHHHHHHHHHcCCe
Confidence 4332211 22578999999999999999986542221 11 1234555567777754
No 235
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.81 E-value=8.2e-09 Score=112.58 Aligned_cols=129 Identities=19% Similarity=0.169 Sum_probs=87.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCC-CCCCceeEEEec
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLP-FPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LP-fpd~sFDlV~~~ 460 (595)
.++.+|||+|||+|..+.+|+.+ .|+++|+++..+..++.+. ...|+. +.+...+...++ +.++.||+|++.
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~-~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENI-ERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH-HHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 35789999999999999988873 5999999998877766444 344555 444555555543 235789999975
Q ss_pred c-c----CcccccC--------H--------HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEE
Q 007641 461 R-C----RVPWHIE--------G--------GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 461 ~-c----~v~~h~d--------~--------~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
. | .+..+.+ . ..+|..+.++|||||+|++++-.+... +.-..+..+++..+|++
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e-----Ene~vv~~~l~~~~~~l 257 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE-----ENEEIISWLVENYPVTI 257 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG-----GTHHHHHHHHHHSSEEE
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc-----cCHHHHHHHHHhCCCEE
Confidence 4 2 1111111 1 278999999999999999886543322 11245667778888776
Q ss_pred EEE
Q 007641 520 VSI 522 (595)
Q Consensus 520 v~~ 522 (595)
+..
T Consensus 258 ~~~ 260 (456)
T 3m4x_A 258 EEI 260 (456)
T ss_dssp ECC
T ss_pred Eec
Confidence 543
No 236
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.80 E-value=7.4e-09 Score=105.67 Aligned_cols=109 Identities=22% Similarity=0.227 Sum_probs=72.5
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL 447 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~L 447 (595)
..++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..+..... ..+. .+.+...+...+
T Consensus 15 ~i~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 15 LIINSIIDKAAL----RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQ-GTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHTCC----CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHT-TSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHH-hcCCCCceEEEEcceecc
Confidence 445566665543 35789999999999999999884 79999999887766654332 2222 355666777777
Q ss_pred CCCCCceeEEEecccCcccccCH-HHHH--------------HHH--HHhccCCcEEE
Q 007641 448 PFPGIVFDAVHCARCRVPWHIEG-GKLL--------------LEL--NRVLRPGGFFI 488 (595)
Q Consensus 448 Pfpd~sFDlV~~~~c~v~~h~d~-~~lL--------------~El--~RvLKPGG~Lv 488 (595)
+++ .||+|+++.+ +.+.... ..+| +|+ +++|+|||.++
T Consensus 90 ~~~--~fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLP--FFDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCC--CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cch--hhcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 765 6999999742 2221111 1222 233 37999999874
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.80 E-value=2.2e-08 Score=109.82 Aligned_cols=106 Identities=20% Similarity=0.256 Sum_probs=76.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCC-CCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPF-PGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPf-pd~sFDlV~~~~ 461 (595)
++.+|||+|||+|..+.+|+.+ .|+++|+++.++..+..+.. ..|+. +.+...+...++. ..+.||+|++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~-r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANIS-RCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHH-HHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 5789999999999999999873 69999999988877764443 34554 4556666666653 457899999742
Q ss_pred -c----Cccccc------C----------HHHHHHHHHHhccCCcEEEEEeCCCC
Q 007641 462 -C----RVPWHI------E----------GGKLLLELNRVLRPGGFFIWSATPVY 495 (595)
Q Consensus 462 -c----~v~~h~------d----------~~~lL~El~RvLKPGG~Lvis~pp~~ 495 (595)
| .+..+. . ...+|.++.++|||||+|++++..+.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 2 111111 1 13689999999999999999865443
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.80 E-value=2e-08 Score=114.88 Aligned_cols=121 Identities=14% Similarity=0.064 Sum_probs=86.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCC---eeEeecCCCC-CCCCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIP---AISAVMGTER-LPFPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~---~~~~v~d~~~-LPfpd~sFDlV~~~~ 461 (595)
++.+|||+|||+|.++.+++.. .|+++|+++.++..++.+.+. .++. +.+...+... ++...++||+|++..
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~-ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL-NGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH-TTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH-cCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 3789999999999999998874 599999999998888766544 4543 5666676543 444567899999976
Q ss_pred cCccc--------c--cCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEE
Q 007641 462 CRVPW--------H--IEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 462 c~v~~--------h--~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
+.+.. . .+...++..+.++|+|||+|+++......... ...+...||..
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~---------~~~l~~~g~~~ 676 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---------LDGLAKLGLKA 676 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC---------HHHHHHTTEEE
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC---------HHHHHHcCCce
Confidence 43321 1 12357899999999999999988654222211 24556678763
No 239
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.80 E-value=5.6e-09 Score=106.23 Aligned_cols=101 Identities=12% Similarity=0.048 Sum_probs=71.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHH-----------cCCCeeEeecCCCC-CCCCCCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALE-----------RGIPAISAVMGTER-LPFPGIV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~e-----------rgi~~~~~v~d~~~-LPfpd~s 453 (595)
.+.+|||||||+|.++..++++ .|+++|+++.++..++..+ .. ....+.+...+... ++. +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 4689999999999999999875 7999999998877776544 11 11234455555432 233 578
Q ss_pred eeEEEecccCccccc----CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 454 FDAVHCARCRVPWHI----EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 454 FDlV~~~~c~v~~h~----d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
||+|++... .++.. ....++..+.++|+|||+|++...
T Consensus 153 fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 999998642 22211 136889999999999999998743
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.79 E-value=3.1e-08 Score=103.15 Aligned_cols=125 Identities=13% Similarity=0.030 Sum_probs=86.0
Q ss_pred CCCEEEEECCCCchhHHHHhh---------CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFD---------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~---------r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~ 459 (595)
++.+|||+|||+|.++..+++ ..|+|+|+++.++..+..+... .++.+.+...+... +.+...||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~-~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADL-QRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHH-HTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHh-CCCCceEEECCCCC-ccccCCccEEEE
Confidence 467999999999999887765 3589999999888777765543 45566666666543 334578999999
Q ss_pred cccCcccccC----------------H-HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEE
Q 007641 460 ARCRVPWHIE----------------G-GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 460 ~~c~v~~h~d----------------~-~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
+.++-.+..+ . ..+|..+.++|+|||++++..|..+-... ....+.+++...||..
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~----~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTS----DFAKVDKFIKKNGHIE 280 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGST----THHHHHHHHHHHEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCc----hHHHHHHHHHhCCeEE
Confidence 8753111100 1 25899999999999999998764321111 1256666666777643
No 241
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.79 E-value=2.6e-08 Score=105.47 Aligned_cols=129 Identities=17% Similarity=0.196 Sum_probs=87.5
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER 446 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~ 446 (595)
...+.+.+.+.. .++.+|||+|||+|.++..++++ .|+|+|+++.++..+ ..+.+...+...
T Consensus 26 ~l~~~~~~~~~~----~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~ 92 (421)
T 2ih2_A 26 EVVDFMVSLAEA----PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLL 92 (421)
T ss_dssp HHHHHHHHHCCC----CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGG
T ss_pred HHHHHHHHhhcc----CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhh
Confidence 445566666542 23569999999999999999863 799999998866443 234556666555
Q ss_pred CCCCCCceeEEEecccCccccc--------CH--------------------HHHHHHHHHhccCCcEEEEEeCCCCCcC
Q 007641 447 LPFPGIVFDAVHCARCRVPWHI--------EG--------------------GKLLLELNRVLRPGGFFIWSATPVYQKL 498 (595)
Q Consensus 447 LPfpd~sFDlV~~~~c~v~~h~--------d~--------------------~~lL~El~RvLKPGG~Lvis~pp~~~~l 498 (595)
.+ +...||+|+++.++..... .. ..+|..+.++|+|||++++..|..+-..
T Consensus 93 ~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~ 171 (421)
T 2ih2_A 93 WE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVL 171 (421)
T ss_dssp CC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTC
T ss_pred cC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcC
Confidence 44 3468999999865443221 11 1568899999999999999877532221
Q ss_pred chhHHHHHHHHHHHHHcCCE
Q 007641 499 PEDVEIWNAMSQLIKAMCWE 518 (595)
Q Consensus 499 ~e~i~~w~~le~Lak~~Gw~ 518 (595)
. ....+.+++...|+.
T Consensus 172 ~----~~~~lr~~l~~~~~~ 187 (421)
T 2ih2_A 172 E----DFALLREFLAREGKT 187 (421)
T ss_dssp G----GGHHHHHHHHHHSEE
T ss_pred c----cHHHHHHHHHhcCCe
Confidence 1 234667777777773
No 242
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.79 E-value=8.1e-08 Score=103.63 Aligned_cols=131 Identities=18% Similarity=0.169 Sum_probs=88.4
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCC---
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTER--- 446 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~--- 446 (595)
+++.+.+.+.. .++.+|||+|||+|.++..|+.+ .|+|+|+++.++..++.+. ...++. +.+...+...
T Consensus 274 l~~~~~~~l~~----~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~-~~~~~~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 274 MVARALEWLDV----QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNA-RLNGLQNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHTC----CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCTTSCCS
T ss_pred HHHHHHHhhcC----CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHH-HHcCCCceEEEECCHHHHhh
Confidence 44444444432 34679999999999999999985 7999999999888877544 445554 5566666544
Q ss_pred -CCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEE
Q 007641 447 -LPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 447 -LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
+++++++||+|++...+.. ...++..+. .++|++.++++..| ..+..-..++...||.+...
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g----~~~~~~~l~-~~~p~~ivyvsc~p---------~tlard~~~l~~~Gy~~~~~ 411 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAG----AAGVMQQII-KLEPIRIVYVSCNP---------ATLARDSEALLKAGYTIARL 411 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTC----CHHHHHHHH-HHCCSEEEEEESCH---------HHHHHHHHHHHHTTCEEEEE
T ss_pred hhhhhcCCCCEEEECCCCcc----HHHHHHHHH-hcCCCeEEEEECCh---------HHHHhhHHHHHHCCcEEEEE
Confidence 4566778999999864332 124555554 47999999887432 22222234456679988664
No 243
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.78 E-value=2.1e-08 Score=106.58 Aligned_cols=125 Identities=14% Similarity=0.017 Sum_probs=86.3
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCC--CeeEeecCCCCC-CC---CCCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGI--PAISAVMGTERL-PF---PGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi--~~~~~v~d~~~L-Pf---pd~sFDlV~~ 459 (595)
++.+|||+|||+|.++..++.. .|+++|+++.++..++.+.. ..++ .+.+...+...+ +. ....||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~-~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAK-LNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 4789999999999999999985 69999999998888775543 4455 355666665433 21 2568999999
Q ss_pred cccCcccc--------cCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHH-HHHHHHHHHcCCE
Q 007641 460 ARCRVPWH--------IEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIW-NAMSQLIKAMCWE 518 (595)
Q Consensus 460 ~~c~v~~h--------~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w-~~le~Lak~~Gw~ 518 (595)
....+... .....++.++.++|+|||+|+++....... ...| ..+...+...|..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~v~~~~~~~~~~ 359 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD----LQMFKDMIIAAGAKAGKF 359 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC----HHHHHHHHHHHHHHTTEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC----HHHHHHHHHHHHHHcCCe
Confidence 76432211 123578899999999999999886432211 1223 4445566667755
No 244
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.77 E-value=4e-08 Score=99.95 Aligned_cols=129 Identities=9% Similarity=0.048 Sum_probs=88.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
+..+|||||||+|.++..++.. .|+++||++.++..+... +...|+...+.+.+...-+ +...||+|++.- +
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~-l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lk--t 207 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEA-LTRLNVPHRTNVADLLEDR-LDEPADVTLLLK--T 207 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHH-HHHTTCCEEEEECCTTTSC-CCSCCSEEEETT--C
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHH-HHhcCCCceEEEeeecccC-CCCCcchHHHHH--H
Confidence 3779999999999999888664 899999999988777644 3455777777777654333 457899999975 4
Q ss_pred ccccCH---HHHHHHHHHhccCCcEEEEEeCC-CCCcCchhHH-HHHHHHHHHHHcCCEEEEE
Q 007641 465 PWHIEG---GKLLLELNRVLRPGGFFIWSATP-VYQKLPEDVE-IWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 465 ~~h~d~---~~lL~El~RvLKPGG~Lvis~pp-~~~~l~e~i~-~w~~le~Lak~~Gw~~v~~ 522 (595)
.++++. +..+ .+...|+|||.||-.-.- +-.+.+.-.. .-..++..+...||..-..
T Consensus 208 i~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~ 269 (281)
T 3lcv_B 208 LPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRL 269 (281)
T ss_dssp HHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeee
Confidence 455543 3555 999999999999865321 2222222222 2266777888899954443
No 245
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.75 E-value=1.5e-08 Score=102.58 Aligned_cols=94 Identities=18% Similarity=0.057 Sum_probs=67.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHH---H-cCCCeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFAL---E-RGIPAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~---e-rgi~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
...+|||||||+|.++..++++ .|+++|+++.++..++..+.. . ....+.+...+..... ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 4679999999999999988874 699999998776555432211 0 1123445555554443 7899999862
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.++..++..+.|+|||||+|++..
T Consensus 148 -----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 -----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 134569999999999999999864
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.69 E-value=4.5e-08 Score=100.57 Aligned_cols=83 Identities=20% Similarity=0.258 Sum_probs=57.8
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLP 448 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LP 448 (595)
.+++.+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++.+.. ..++ .+.+...+...++
T Consensus 29 ~i~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~-~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 29 GILDKIIYAAKI----KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCL-YEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHH-HTTCCCEEC----CCSSC
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEECchhhCC
Confidence 345555555432 35789999999999999999985 79999999988877765443 3344 3455556667776
Q ss_pred CCCCceeEEEecc
Q 007641 449 FPGIVFDAVHCAR 461 (595)
Q Consensus 449 fpd~sFDlV~~~~ 461 (595)
++ .||+|+++.
T Consensus 104 ~~--~~D~Vv~n~ 114 (299)
T 2h1r_A 104 FP--KFDVCTANI 114 (299)
T ss_dssp CC--CCSEEEEEC
T ss_pred cc--cCCEEEEcC
Confidence 64 799999975
No 247
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.68 E-value=5.6e-08 Score=105.07 Aligned_cols=140 Identities=13% Similarity=0.115 Sum_probs=91.9
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhh-----------------CCcEEEeCCchhHHHHHHHHHHHcCC
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-----------------RGVLTMSFAPKDEHEAQVQFALERGI 435 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~-----------------r~V~giDisp~di~~aqvq~A~ergi 435 (595)
..+.|.+.+.. .++.+|||+|||+|.|+..+++ ..++|+|+++.++..|+.+... +++
T Consensus 159 v~~~mv~~l~~----~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l-~g~ 233 (445)
T 2okc_A 159 LIQAMVDCINP----QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL-HGI 233 (445)
T ss_dssp HHHHHHHHHCC----CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHHhCC----CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH-hCC
Confidence 44555555432 3567999999999999877654 4799999999888777655543 454
Q ss_pred ---CeeEeecCCCCCCCCCCceeEEEecccCccccc-C---------------HHHHHHHHHHhccCCcEEEEEeCCC--
Q 007641 436 ---PAISAVMGTERLPFPGIVFDAVHCARCRVPWHI-E---------------GGKLLLELNRVLRPGGFFIWSATPV-- 494 (595)
Q Consensus 436 ---~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~-d---------------~~~lL~El~RvLKPGG~Lvis~pp~-- 494 (595)
...+...+....+.. ..||+|+++.++..... . ...+|..+.++|||||++++..|..
T Consensus 234 ~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L 312 (445)
T 2okc_A 234 GTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVL 312 (445)
T ss_dssp CSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHH
T ss_pred CcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCccc
Confidence 445666666555543 48999999875443211 1 1378999999999999999887631
Q ss_pred CCcCchhHHHHHHHHH-HHHHcCCEEEEEe
Q 007641 495 YQKLPEDVEIWNAMSQ-LIKAMCWELVSIS 523 (595)
Q Consensus 495 ~~~l~e~i~~w~~le~-Lak~~Gw~~v~~~ 523 (595)
+... ....+.+ +++...+..+...
T Consensus 313 ~~~~-----~~~~iR~~L~~~~~l~~ii~l 337 (445)
T 2okc_A 313 FEAG-----AGETIRKRLLQDFNLHTILRL 337 (445)
T ss_dssp HCST-----HHHHHHHHHHHHEEEEEEEEC
T ss_pred ccCc-----HHHHHHHHHHhcCcEEEEEeC
Confidence 1110 1234554 5566666554443
No 248
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.68 E-value=5e-08 Score=100.45 Aligned_cols=113 Identities=12% Similarity=0.022 Sum_probs=75.7
Q ss_pred CCCCEEEEECCC------Cch-hHHHHhh--CCcEEEeCCchhHHHHHHHHHHHcCCCeeE-eecCCCCCCCCCCceeEE
Q 007641 388 KRTRVVLDVGCG------VAS-FGGFLFD--RGVLTMSFAPKDEHEAQVQFALERGIPAIS-AVMGTERLPFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGCG------tG~-~a~~La~--r~V~giDisp~di~~aqvq~A~ergi~~~~-~v~d~~~LPfpd~sFDlV 457 (595)
.++.+||||||| +|. .+..+.. ..|+|+|+++. + . .+.+ ...+...++++ ++||+|
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v----------~--~v~~~i~gD~~~~~~~-~~fD~V 127 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V----------S--DADSTLIGDCATVHTA-NKWDLI 127 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B----------C--SSSEEEESCGGGCCCS-SCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C----------C--CCEEEEECccccCCcc-CcccEE
Confidence 457899999994 465 1222221 36999999986 1 1 3445 67777777765 689999
Q ss_pred EecccCccc-------c---cC-HHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 458 HCARCRVPW-------H---IE-GGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 458 ~~~~c~v~~-------h---~d-~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
++.. ...+ + .. ...+|+++.|+|||||+|++....... ...+..+++..||..+...
T Consensus 128 vsn~-~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--------~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 128 ISDM-YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--------NADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp EECC-CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--------CHHHHHHHTTEEEEEEEEE
T ss_pred EEcC-CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--------HHHHHHHHHHcCCcEEEEE
Confidence 9963 1111 1 11 147899999999999999997542211 1366778888899876654
No 249
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.66 E-value=5.8e-08 Score=97.74 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=75.1
Q ss_pred CCCCEEEEECCCCchhHHHHhh-CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFD-RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~-r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
.+..+|||||||+|.++..+.. ..++++||++.++..+... +...+.+..+.+.|....+++ ..||+|++.- +.+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~-~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk--~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPF-AREKDWDFTFALQDVLCAPPA-EAGDLALIFK--LLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHH-HHHTTCEEEEEECCTTTSCCC-CBCSEEEEES--CHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHH-HHhcCCCceEEEeecccCCCC-CCcchHHHHH--HHH
Confidence 3578999999999999998774 4899999999988777644 445577788888887777766 4899999874 334
Q ss_pred cc---CHHHHHHHHHHhccCCcEEEEE
Q 007641 467 HI---EGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 467 h~---d~~~lL~El~RvLKPGG~Lvis 490 (595)
++ .....+ .+.+.|+|+|.+|-.
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEEc
Confidence 44 224444 888899999887754
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.63 E-value=1.7e-07 Score=101.28 Aligned_cols=97 Identities=22% Similarity=0.192 Sum_probs=71.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPW 466 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~ 466 (595)
++.+|||+|||+|.++..|+++ .|+|+|+++.++..++.+. ...++.+.+...++..+.. . .||+|++.....
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~-~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPPr~-- 364 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNV-EINNVDAEFEVASDREVSV-K-GFDTVIVDPPRA-- 364 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHHTCCEEEEECCTTTCCC-T-TCSEEEECCCTT--
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HHcCCcEEEEECChHHcCc-c-CCCEEEEcCCcc--
Confidence 4789999999999999999985 7999999999988877554 3445556666677666542 2 899999976321
Q ss_pred ccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 467 HIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 467 h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.-...++..+ +.|+|||+++++..
T Consensus 365 -g~~~~~~~~l-~~l~p~givyvsc~ 388 (425)
T 2jjq_A 365 -GLHPRLVKRL-NREKPGVIVYVSCN 388 (425)
T ss_dssp -CSCHHHHHHH-HHHCCSEEEEEESC
T ss_pred -chHHHHHHHH-HhcCCCcEEEEECC
Confidence 1123455555 45999999999853
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.62 E-value=2e-09 Score=106.81 Aligned_cols=113 Identities=12% Similarity=0.008 Sum_probs=74.2
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCC
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP 450 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfp 450 (595)
.++.+.+.+.. .++.+|||||||+|.++..|+++ .|+|+|+++.++..++.+.. ....+.+...|...++++
T Consensus 17 ~~~~i~~~~~~----~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 17 VLNQIIKQLNL----KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp THHHHHHHCCC----CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCC
T ss_pred HHHHHHHhcCC----CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcc
Confidence 34555555542 35779999999999999999884 79999999987655442221 112345666777888877
Q ss_pred C-CceeEEEecccCcccc----------cCHHHHH----HHHHHhccCCcEEEEEeC
Q 007641 451 G-IVFDAVHCARCRVPWH----------IEGGKLL----LELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 451 d-~sFDlV~~~~c~v~~h----------~d~~~lL----~El~RvLKPGG~Lvis~p 492 (595)
. ++| .|+++.++.... .....+| ..+.|+|+|||.|++...
T Consensus 91 ~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 91 NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 4 689 677764221100 0112233 569999999999887644
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.48 E-value=2.3e-07 Score=92.44 Aligned_cols=83 Identities=16% Similarity=0.153 Sum_probs=57.4
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
.+++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++.... ....+.+...+...+++
T Consensus 17 ~~~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 17 HNIDKIMTNIRL----NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLV--DHDNFQVLNKDILQFKF 90 (244)
T ss_dssp HHHHHHHTTCCC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTT--TCCSEEEECCCGGGCCC
T ss_pred HHHHHHHHhCCC----CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhc--cCCCeEEEEChHHhCCc
Confidence 455556555542 35789999999999999999885 79999999887665543322 11245666777788888
Q ss_pred CC-CceeEEEecc
Q 007641 450 PG-IVFDAVHCAR 461 (595)
Q Consensus 450 pd-~sFDlV~~~~ 461 (595)
++ ..| .|+++.
T Consensus 91 ~~~~~~-~vv~nl 102 (244)
T 1qam_A 91 PKNQSY-KIFGNI 102 (244)
T ss_dssp CSSCCC-EEEEEC
T ss_pred ccCCCe-EEEEeC
Confidence 74 456 455543
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.47 E-value=6.3e-07 Score=92.44 Aligned_cols=84 Identities=15% Similarity=0.076 Sum_probs=65.4
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
.+++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++..++ ....+.+...|...+++
T Consensus 37 ~i~~~Iv~~l~~----~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 37 NFVNKAVESANL----TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCG
T ss_pred HHHHHHHHhcCC----CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCc
Confidence 445566665543 35789999999999999999884 79999999999887765554 22346677788888888
Q ss_pred CCCceeEEEecc
Q 007641 450 PGIVFDAVHCAR 461 (595)
Q Consensus 450 pd~sFDlV~~~~ 461 (595)
++..||+|+++.
T Consensus 111 ~~~~fD~Iv~Nl 122 (295)
T 3gru_A 111 NKLDFNKVVANL 122 (295)
T ss_dssp GGSCCSEEEEEC
T ss_pred ccCCccEEEEeC
Confidence 888899999874
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.43 E-value=1.3e-07 Score=100.16 Aligned_cols=104 Identities=15% Similarity=0.087 Sum_probs=69.1
Q ss_pred CCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcC--C------CeeEeecCCCCC-C-C--CCCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERG--I------PAISAVMGTERL-P-F--PGIV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~erg--i------~~~~~v~d~~~L-P-f--pd~s 453 (595)
.+++||+||||+|.++.+++++ .|+++|+++..+..++..+..-.+ + .+.+...|+... . + ..+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 5789999999999999998885 699999998877666543321100 1 245556664332 1 1 3478
Q ss_pred eeEEEecccCcccc-----cCHHHHHHHH----HHhccCCcEEEEEeC
Q 007641 454 FDAVHCARCRVPWH-----IEGGKLLLEL----NRVLRPGGFFIWSAT 492 (595)
Q Consensus 454 FDlV~~~~c~v~~h-----~d~~~lL~El----~RvLKPGG~Lvis~p 492 (595)
||+|++....++.. +....+++.+ .++|+|||+|++...
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 99999864221211 2235666666 899999999998753
No 255
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.42 E-value=3.5e-07 Score=101.61 Aligned_cols=116 Identities=16% Similarity=0.023 Sum_probs=79.7
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhh----------------------CCcEEEeCCchhHHHHHHHHH
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD----------------------RGVLTMSFAPKDEHEAQVQFA 430 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~----------------------r~V~giDisp~di~~aqvq~A 430 (595)
....|.+.+.. .++.+|||.|||+|.|+..+++ ..++|+|+++.++..|..+..
T Consensus 157 iv~~mv~~l~p----~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 157 LIKTIIHLLKP----QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp HHHHHHHHHCC----CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc----CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 34445554432 3577999999999998877654 268999999988777765544
Q ss_pred HHcCCC------eeEeecCCCCCC-CCCCceeEEEecccCccccc------------C-HHHHHHHHHHhccCCcEEEEE
Q 007641 431 LERGIP------AISAVMGTERLP-FPGIVFDAVHCARCRVPWHI------------E-GGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 431 ~ergi~------~~~~v~d~~~LP-fpd~sFDlV~~~~c~v~~h~------------d-~~~lL~El~RvLKPGG~Lvis 490 (595)
. +++. ..+...+....+ ++...||+|+++.++..... + ...+|..+.++|||||++++.
T Consensus 233 l-~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V 311 (541)
T 2ar0_A 233 L-HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVV 311 (541)
T ss_dssp T-TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred H-hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEE
Confidence 3 3444 345555554332 34568999999875443211 1 247899999999999999998
Q ss_pred eCC
Q 007641 491 ATP 493 (595)
Q Consensus 491 ~pp 493 (595)
.|.
T Consensus 312 ~p~ 314 (541)
T 2ar0_A 312 VPD 314 (541)
T ss_dssp EEH
T ss_pred ecC
Confidence 764
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.41 E-value=4.9e-07 Score=96.36 Aligned_cols=102 Identities=13% Similarity=-0.012 Sum_probs=74.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC------------------------------------------CcEEEeCCchhHHHHH
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR------------------------------------------GVLTMSFAPKDEHEAQ 426 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r------------------------------------------~V~giDisp~di~~aq 426 (595)
++.+|||+|||+|.|+..++.. .|+|+|+++.++..|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 5789999999999988777542 4899999999998887
Q ss_pred HHHHHHcCC--CeeEeecCCCCCCCCCCceeEEEecccCccccc---CHHHHHHHHHHhccC--CcEEEEEeC
Q 007641 427 VQFALERGI--PAISAVMGTERLPFPGIVFDAVHCARCRVPWHI---EGGKLLLELNRVLRP--GGFFIWSAT 492 (595)
Q Consensus 427 vq~A~ergi--~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~---d~~~lL~El~RvLKP--GG~Lvis~p 492 (595)
.+.. ..++ .+.+...+...++.+ ..||+|+++.++..... +...++.++.++||+ ||.+++..+
T Consensus 275 ~Na~-~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 275 ENAE-IAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHH-HHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHH-HcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 5543 4455 356677777777765 58999999975432111 235677778888887 888877654
No 257
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.40 E-value=4.9e-07 Score=95.35 Aligned_cols=94 Identities=18% Similarity=0.203 Sum_probs=67.0
Q ss_pred CCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCC-C-CCC-------------
Q 007641 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERL-P-FPG------------- 451 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~L-P-fpd------------- 451 (595)
+.+|||+|||+|.++..|+.. .|+++|+++.++..++.+. ...++. +.+...++..+ + +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~-~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNI-AANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHH-HHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 578999999999999999884 7999999999988887554 445554 45555555332 1 111
Q ss_pred -CceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 452 -IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 452 -~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
..||+|++..... .+..++.++|+|+|.+++..
T Consensus 293 ~~~fD~Vv~dPPr~-------g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 293 SYQCETIFVDPPRS-------GLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp GCCEEEEEECCCTT-------CCCHHHHHHHTTSSEEEEEE
T ss_pred cCCCCEEEECcCcc-------ccHHHHHHHHhCCCEEEEEE
Confidence 3799999875322 23456777888999888764
No 258
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.38 E-value=1.1e-06 Score=94.01 Aligned_cols=102 Identities=11% Similarity=-0.032 Sum_probs=73.7
Q ss_pred CCCEEEEECCCCchhHHHHhhC------------------------------------------CcEEEeCCchhHHHHH
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR------------------------------------------GVLTMSFAPKDEHEAQ 426 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r------------------------------------------~V~giDisp~di~~aq 426 (595)
++.+|||++||+|.++..++.. .|+|+|+++.++..++
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 4789999999999998766642 2999999999998887
Q ss_pred HHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEecccCccccc---CHHHHHHHHHHhccC--CcEEEEEeC
Q 007641 427 VQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARCRVPWHI---EGGKLLLELNRVLRP--GGFFIWSAT 492 (595)
Q Consensus 427 vq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~---d~~~lL~El~RvLKP--GG~Lvis~p 492 (595)
.+. ...|+. +.+...+...++.+ ..||+|+++.++..... +...++..+.++||+ ||.+++...
T Consensus 281 ~Na-~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 281 QNA-VEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHH-HHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHH-HHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 554 445553 56777788778765 48999999974322111 224566777777776 888877754
No 259
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.38 E-value=1.8e-06 Score=92.09 Aligned_cols=102 Identities=13% Similarity=0.033 Sum_probs=74.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC------------------------------------------CcEEEeCCchhHHHHH
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR------------------------------------------GVLTMSFAPKDEHEAQ 426 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r------------------------------------------~V~giDisp~di~~aq 426 (595)
++..|||.+||+|.++..++.. .|+|+|+++.++..++
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 5789999999999998776641 2999999999988887
Q ss_pred HHHHHHcCCC--eeEeecCCCCCCCCCCceeEEEecccCccccc---CHHHHHHHHHHhccC--CcEEEEEeC
Q 007641 427 VQFALERGIP--AISAVMGTERLPFPGIVFDAVHCARCRVPWHI---EGGKLLLELNRVLRP--GGFFIWSAT 492 (595)
Q Consensus 427 vq~A~ergi~--~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~---d~~~lL~El~RvLKP--GG~Lvis~p 492 (595)
.+ +...|+. +.+...+...++.+ ..||+|+++.++-.-.. +...++..+.++||+ ||.++|..+
T Consensus 274 ~N-a~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 274 KN-AREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HH-HHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HH-HHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 54 4445553 56777777778765 48999999974321111 235677778888887 888887764
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.30 E-value=2.5e-06 Score=86.86 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=64.9
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
..++.|.+.+.. .++ +|||||||+|.++..|+++ .|+++|+++.++..++.++. ...+.+...|...+++
T Consensus 34 ~i~~~Iv~~~~~----~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 34 AHLRRIVEAARP----FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHCC----CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCG
T ss_pred HHHHHHHHhcCC----CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCCh
Confidence 445556555543 346 9999999999999999986 89999999998876654432 2356677778888877
Q ss_pred CCC-ceeEEEecccCcccccCHHH
Q 007641 450 PGI-VFDAVHCARCRVPWHIEGGK 472 (595)
Q Consensus 450 pd~-sFDlV~~~~c~v~~h~d~~~ 472 (595)
++. .||.|+++. ++++....
T Consensus 106 ~~~~~~~~iv~Nl---Py~iss~i 126 (271)
T 3fut_A 106 EEVPQGSLLVANL---PYHIATPL 126 (271)
T ss_dssp GGSCTTEEEEEEE---CSSCCHHH
T ss_pred hhccCccEEEecC---cccccHHH
Confidence 643 689999874 55554433
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.28 E-value=2.1e-06 Score=86.63 Aligned_cols=83 Identities=10% Similarity=0.115 Sum_probs=59.4
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF 449 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf 449 (595)
..++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..++.++.. ...+.+...|...+++
T Consensus 16 ~i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 16 FVLQKIVSAIHP----QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCG
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCH
Confidence 345555555543 35789999999999999999985 799999998887766544322 3356677778777776
Q ss_pred CC----CceeEEEecc
Q 007641 450 PG----IVFDAVHCAR 461 (595)
Q Consensus 450 pd----~sFDlV~~~~ 461 (595)
++ ..|| |+++.
T Consensus 90 ~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 90 SSVKTDKPLR-VVGNL 104 (255)
T ss_dssp GGSCCSSCEE-EEEEC
T ss_pred HHhccCCCeE-EEecC
Confidence 43 4688 66653
No 262
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.28 E-value=2.6e-06 Score=86.88 Aligned_cols=100 Identities=21% Similarity=0.276 Sum_probs=64.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccC
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
.++.+|||||||+|.|+.+++.+ .|.++++... +....+.. ...+..++.+..++....++...||+|+|..
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvD-l~~~pi~~-~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~-- 148 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRD-GHEKPMNV-QSLGWNIITFKDKTDIHRLEPVKCDTLLCDI-- 148 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT-TCCCCCCC-CBTTGGGEEEECSCCTTTSCCCCCSEEEECC--
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEecc-Cccccccc-CcCCCCeEEEeccceehhcCCCCccEEEecC--
Confidence 35779999999999999988765 5677777622 11000000 0112234445544455567778999999975
Q ss_pred cccc----cCH---HHHHHHHHHhccCC-cEEEEEe
Q 007641 464 VPWH----IEG---GKLLLELNRVLRPG-GFFIWSA 491 (595)
Q Consensus 464 v~~h----~d~---~~lL~El~RvLKPG-G~Lvis~ 491 (595)
.+.. .+. -.+|..+.++|+|| |.|++-.
T Consensus 149 apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 149 GESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred ccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 2221 122 13578889999999 9999865
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.23 E-value=7.5e-06 Score=84.79 Aligned_cols=105 Identities=10% Similarity=0.029 Sum_probs=70.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC-eeEeecCCCCCCCCC---CceeEEE
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP-AISAVMGTERLPFPG---IVFDAVH 458 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~-~~~~v~d~~~LPfpd---~sFDlV~ 458 (595)
.++.+|||+|||+|..+.+|+.. .|+++|+++..+..++.+. ...|+. +.+...+...++... ..||+|+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~-~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL-ARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 35789999999999999988872 6999999998877766443 344654 455666666654332 5799999
Q ss_pred ecc-c----CcccccC-----------H-------HHHHHHHHHhccCCcEEEEEeCCC
Q 007641 459 CAR-C----RVPWHIE-----------G-------GKLLLELNRVLRPGGFFIWSATPV 494 (595)
Q Consensus 459 ~~~-c----~v~~h~d-----------~-------~~lL~El~RvLKPGG~Lvis~pp~ 494 (595)
+.. | .+..+++ . ..+|..+.++|+ ||+|+.++-.+
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 742 1 1111111 1 246777888887 99999876443
No 264
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.20 E-value=1.8e-06 Score=91.85 Aligned_cols=99 Identities=15% Similarity=0.011 Sum_probs=73.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHc--------------CCC-eeEeecCCCCCC-
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALER--------------GIP-AISAVMGTERLP- 448 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~er--------------gi~-~~~~v~d~~~LP- 448 (595)
++.+|||+|||+|.++..++.+ .|+++|+++..+..++.+..+.. ++. +.+...|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 3679999999999999988874 58999999998888876665541 554 555555543321
Q ss_pred CCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 449 FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 449 fpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.....||+|++.. . .....+|..+.++|||||+|+++.+
T Consensus 127 ~~~~~fD~I~lDP-~----~~~~~~l~~a~~~lk~gG~l~vt~t 165 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F----GSPMEFLDTALRSAKRRGILGVTAT 165 (378)
T ss_dssp HSTTCEEEEEECC-S----SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hccCCCCEEEeCC-C----CCHHHHHHHHHHhcCCCCEEEEEee
Confidence 1135799999754 1 1246889999999999999988743
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.18 E-value=1.7e-05 Score=90.68 Aligned_cols=132 Identities=14% Similarity=-0.009 Sum_probs=83.8
Q ss_pred CCCEEEEECCCCchhHHHHhh----------------------------------------------CCcEEEeCCchhH
Q 007641 389 RTRVVLDVGCGVASFGGFLFD----------------------------------------------RGVLTMSFAPKDE 422 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~----------------------------------------------r~V~giDisp~di 422 (595)
++.+|||.+||+|.++..++. ..|+|+|+++.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 477899999999998866543 2699999999998
Q ss_pred HHHHHHHHHHcCCC--eeEeecCCCCC--CCCCCceeEEEecccCccccc---CHHHH---HHHHHHhccCCcEEEEEeC
Q 007641 423 HEAQVQFALERGIP--AISAVMGTERL--PFPGIVFDAVHCARCRVPWHI---EGGKL---LLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 423 ~~aqvq~A~ergi~--~~~~v~d~~~L--Pfpd~sFDlV~~~~c~v~~h~---d~~~l---L~El~RvLKPGG~Lvis~p 492 (595)
..|+.+ +...|+. +.+...+...+ |+..+.||+|+++.++-.-.. +...+ |.++.+.+.|||.++|..+
T Consensus 270 ~~A~~N-~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 270 QRARTN-ARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHH-HHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHH-HHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 888754 4456665 45666776666 444458999999974311111 12333 4445555668999998864
Q ss_pred CCCCcCchhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEEE
Q 007641 493 PVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYR 536 (595)
Q Consensus 493 p~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~ 536 (595)
. ..+.+.+|.+........-.+..+.+++
T Consensus 349 ~---------------~~l~~~~glk~~k~~~l~nG~l~~~~~~ 377 (703)
T 3v97_A 349 S---------------PDLLSCLQLRADKQYKAKNGPLDCVQKN 377 (703)
T ss_dssp C---------------HHHHHTTCCCEEEEEEEEETTEEEEEEE
T ss_pred C---------------HHHHHHhCCCcccceeeecCCEEEEEEE
Confidence 2 2345567877554444332333344433
No 266
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.18 E-value=4.3e-06 Score=92.97 Aligned_cols=141 Identities=13% Similarity=0.011 Sum_probs=89.9
Q ss_pred HHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-------CcEEEeCCchhHHHHHHHHHHHcCCC---eeEeec
Q 007641 373 YIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-------GVLTMSFAPKDEHEAQVQFALERGIP---AISAVM 442 (595)
Q Consensus 373 yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-------~V~giDisp~di~~aqvq~A~ergi~---~~~~v~ 442 (595)
..+.|.+++.......++.+|||.+||+|.|+..++++ .++|+|+++..+..+..+... +|+. ..+...
T Consensus 205 Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~~~~I~~g 283 (542)
T 3lkd_A 205 VAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL-HGVPIENQFLHNA 283 (542)
T ss_dssp HHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH-TTCCGGGEEEEES
T ss_pred HHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH-cCCCcCccceEec
Confidence 44555555432111235789999999999988776553 689999999888777766544 4552 345566
Q ss_pred CCCCC--C-CCCCceeEEEecccCcc-ccc------C---------------HHHHHHHHHHhcc-CCcEEEEEeCCCCC
Q 007641 443 GTERL--P-FPGIVFDAVHCARCRVP-WHI------E---------------GGKLLLELNRVLR-PGGFFIWSATPVYQ 496 (595)
Q Consensus 443 d~~~L--P-fpd~sFDlV~~~~c~v~-~h~------d---------------~~~lL~El~RvLK-PGG~Lvis~pp~~~ 496 (595)
+.... | ++...||+|+++.++.. |.. + .-.++..+.+.|+ |||++++..|.-+-
T Consensus 284 DtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~L 363 (542)
T 3lkd_A 284 DTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVL 363 (542)
T ss_dssp CTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHH
T ss_pred ceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHh
Confidence 65444 3 45678999999875532 100 0 1248999999999 99999988764221
Q ss_pred cCchhHHHHHHHHHHHHHcCC
Q 007641 497 KLPEDVEIWNAMSQLIKAMCW 517 (595)
Q Consensus 497 ~l~e~i~~w~~le~Lak~~Gw 517 (595)
... .....+.+.+-..++
T Consensus 364 f~~---~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 364 FRG---NAEGTIRKALLEEGA 381 (542)
T ss_dssp HCC---THHHHHHHHHHHTTC
T ss_pred hCC---chhHHHHHHHHhCCc
Confidence 111 113456665555554
No 267
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.18 E-value=5e-06 Score=92.52 Aligned_cols=138 Identities=14% Similarity=0.026 Sum_probs=87.6
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhh-------------------CCcEEEeCCchhHHHHHHHHHHH
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-------------------RGVLTMSFAPKDEHEAQVQFALE 432 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~-------------------r~V~giDisp~di~~aqvq~A~e 432 (595)
.....|.+++.. . ..+|||.+||+|.|+..++. ..++|+|+++..+..|..+...
T Consensus 232 ~Vv~lmv~ll~p----~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l- 305 (544)
T 3khk_A 232 SIVTLIVEMLEP----Y-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI- 305 (544)
T ss_dssp HHHHHHHHHHCC----C-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhc----C-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH-
Confidence 345555555532 2 23999999999998876532 3689999999888777766554
Q ss_pred cCCCeeE--eecCCCCC-CCCCCceeEEEecccCcc--cc---------------------c-----CHHHHHHHHHHhc
Q 007641 433 RGIPAIS--AVMGTERL-PFPGIVFDAVHCARCRVP--WH---------------------I-----EGGKLLLELNRVL 481 (595)
Q Consensus 433 rgi~~~~--~v~d~~~L-Pfpd~sFDlV~~~~c~v~--~h---------------------~-----d~~~lL~El~RvL 481 (595)
+++...+ ...+.... .++...||+|+++.++.. |. . ..-.+|..+.+.|
T Consensus 306 ~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~L 385 (544)
T 3khk_A 306 RGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHL 385 (544)
T ss_dssp TTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTE
T ss_pred hCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHh
Confidence 4544333 44444333 355678999999986553 11 1 0126899999999
Q ss_pred cCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCC
Q 007641 482 RPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCW 517 (595)
Q Consensus 482 KPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw 517 (595)
+|||++++..|..+-.... .....+.+.+-..++
T Consensus 386 k~gGr~aiVlP~g~L~~~~--~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 386 APTGSMALLLANGSMSSNT--NNEGEIRKTLVEQDL 419 (544)
T ss_dssp EEEEEEEEEEETHHHHCCG--GGHHHHHHHHHHTTC
T ss_pred ccCceEEEEecchhhhcCc--chHHHHHHHHHhCCc
Confidence 9999999887642211110 112456665555554
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.13 E-value=4.5e-06 Score=94.28 Aligned_cols=99 Identities=12% Similarity=0.050 Sum_probs=64.5
Q ss_pred CCCEEEEECCCCchhHHHHh---hC-----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGFLF---DR-----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La---~r-----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~ 460 (595)
...+|||||||+|.+....+ .+ +|++++-++......++..+...+-.+.++..+++.+.+| .++|+|++=
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 34689999999998743333 32 5899999986543333222222233355666777777666 679999985
Q ss_pred c-cCcccccCHHHHHHHHHHhccCCcEEE
Q 007641 461 R-CRVPWHIEGGKLLLELNRVLRPGGFFI 488 (595)
Q Consensus 461 ~-c~v~~h~d~~~lL~El~RvLKPGG~Lv 488 (595)
. ..++.......+|....|.|||||.++
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 4 112222223467888899999999887
No 269
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.12 E-value=3e-06 Score=90.72 Aligned_cols=98 Identities=16% Similarity=0.062 Sum_probs=71.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHHHHHHHHHcCCC---eeEeecCCCCC-C-CCCCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEAQVQFALERGIP---AISAVMGTERL-P-FPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~aqvq~A~ergi~---~~~~v~d~~~L-P-fpd~sFDlV~ 458 (595)
++.+|||++||+|.++..++.+ .|+++|+++..+..++.+.. ..++. +.+...|+..+ . .....||+|+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~-~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFK-LNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHH-HTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 4679999999999999998872 58999999988877765544 34554 45555554322 1 1135799999
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+.. . .....++..+.++|+|||+|+++.+
T Consensus 131 lDP--~---g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 131 LDP--F---GTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp ECC--S---SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECC--C---cCHHHHHHHHHHHhCCCCEEEEEec
Confidence 875 1 1235689999999999999998754
No 270
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.12 E-value=1.8e-05 Score=81.58 Aligned_cols=129 Identities=14% Similarity=0.099 Sum_probs=82.5
Q ss_pred CCccccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH-c---
Q 007641 362 GGTQFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-R--- 433 (595)
Q Consensus 362 gg~~F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e-r--- 433 (595)
|..++.......+..+.-+++.... +..++||=||.|.|..++.+++. .|+.++|++..+..++.-+..- .
T Consensus 57 g~~q~te~De~~YhE~l~h~~l~~~-p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~ 135 (294)
T 3o4f_A 57 GVVQTTERDEFIYHEMMTHVPLLAH-GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSY 135 (294)
T ss_dssp TEEEEETTTHHHHHHHHHHHHHHHS-SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG
T ss_pred CchhhccccHHHHHHHHHHHHHhhC-CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcccccccc
Confidence 3344433333333333333343332 34789999999999999999985 6899999988776665433221 1
Q ss_pred -CCCeeEeecCC-CCCCCCCCceeEEEecccCccc----ccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 434 -GIPAISAVMGT-ERLPFPGIVFDAVHCARCRVPW----HIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 434 -gi~~~~~v~d~-~~LPfpd~sFDlV~~~~c~v~~----h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
...+.+.+.|. .-+--..++||+|+.-. .-+. ++-...+++.+.|+|+|||+|+.-..
T Consensus 136 ~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 136 DDPRFKLVIDDGVNFVNQTSQTFDVIISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp GCTTEEEEESCTTTTTSCSSCCEEEEEESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCcEEEEechHHHHHhhccccCCEEEEeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 22345566664 33344567899999753 1111 22236899999999999999997643
No 271
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.10 E-value=7.2e-06 Score=87.25 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=66.3
Q ss_pred CCEEEEECCCCchhHHHHhh-------------------CCcEEEeCCchhHHHHHHHHHHH------------c--CCC
Q 007641 390 TRVVLDVGCGVASFGGFLFD-------------------RGVLTMSFAPKDEHEAQVQFALE------------R--GIP 436 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~-------------------r~V~giDisp~di~~aqvq~A~e------------r--gi~ 436 (595)
..+|+|+|||+|..+..++. ..|..-|+..+|...-....... . +.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999988877632 14566688777754433222110 0 001
Q ss_pred eeEeecCC-CCCCCCCCceeEEEecccCcccccC--------------------------------------HHHHHHHH
Q 007641 437 AISAVMGT-ERLPFPGIVFDAVHCARCRVPWHIE--------------------------------------GGKLLLEL 477 (595)
Q Consensus 437 ~~~~v~d~-~~LPfpd~sFDlV~~~~c~v~~h~d--------------------------------------~~~lL~El 477 (595)
....+.+. ..-.||+++||+||++. .+||..+ ...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~-aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAF-SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEES-CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecc-eeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233332 33458999999999996 4777541 12468889
Q ss_pred HHhccCCcEEEEEe
Q 007641 478 NRVLRPGGFFIWSA 491 (595)
Q Consensus 478 ~RvLKPGG~Lvis~ 491 (595)
+|.|+|||+|+++.
T Consensus 212 a~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 212 AAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEE
Confidence 99999999999884
No 272
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.10 E-value=9e-06 Score=93.66 Aligned_cols=105 Identities=10% Similarity=-0.019 Sum_probs=71.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC-------CcEEEeCCchhHHHHHHHHHHH-----cCCCeeEeecC-CCCC-CCCCCce
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR-------GVLTMSFAPKDEHEAQVQFALE-----RGIPAISAVMG-TERL-PFPGIVF 454 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r-------~V~giDisp~di~~aqvq~A~e-----rgi~~~~~v~d-~~~L-Pfpd~sF 454 (595)
++.+|||.|||+|.|+..++.+ .++|+|+++..+..|..+.... .++.......+ ...+ +.....|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 4789999999999999888764 4799999998877763333221 23333222233 2222 2345789
Q ss_pred eEEEecccCcccccC----------------------------HHHHHHHHHHhccCCcEEEEEeCC
Q 007641 455 DAVHCARCRVPWHIE----------------------------GGKLLLELNRVLRPGGFFIWSATP 493 (595)
Q Consensus 455 DlV~~~~c~v~~h~d----------------------------~~~lL~El~RvLKPGG~Lvis~pp 493 (595)
|+|+++.++...... ...++..+.++|+|||++++..|.
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 999999876431110 124678899999999999998775
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.98 E-value=1.8e-05 Score=79.31 Aligned_cols=86 Identities=13% Similarity=0.175 Sum_probs=57.6
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP 448 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP 448 (595)
.+++.|.+.+.. .++.+|||||||+|.++..|+++ .|+++|+++.++..+... ....+.+...|...++
T Consensus 18 ~i~~~iv~~~~~----~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 18 GVLKKIAEELNI----EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFP 89 (249)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCC
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCC
Confidence 455666666543 35789999999999999999986 599999997765444322 2234566777788887
Q ss_pred CCCCc-eeEEEecccCccccc
Q 007641 449 FPGIV-FDAVHCARCRVPWHI 468 (595)
Q Consensus 449 fpd~s-FDlV~~~~c~v~~h~ 468 (595)
+++.. ..+|+++ +++++
T Consensus 90 ~~~~~~~~~vv~N---lPy~i 107 (249)
T 3ftd_A 90 FCSLGKELKVVGN---LPYNV 107 (249)
T ss_dssp GGGSCSSEEEEEE---CCTTT
T ss_pred hhHccCCcEEEEE---Cchhc
Confidence 76421 2255554 34554
No 274
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.98 E-value=2.4e-05 Score=79.03 Aligned_cols=122 Identities=16% Similarity=0.120 Sum_probs=73.1
Q ss_pred CCCCEEEEECCCCchhHHHHhh----------------CCcEEEeCCc---hhHHHHH------HHHHH---Hc------
Q 007641 388 KRTRVVLDVGCGVASFGGFLFD----------------RGVLTMSFAP---KDEHEAQ------VQFAL---ER------ 433 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~----------------r~V~giDisp---~di~~aq------vq~A~---er------ 433 (595)
.+..+|||||+|+|..+..+++ ..|++++..| .++..+. ...|+ ..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 3457999999999986655432 2689999887 3333221 01121 11
Q ss_pred ---------C-CCeeEeecCCCC-CCCCC----CceeEEEecccCccc-ccC--HHHHHHHHHHhccCCcEEEEEeCCCC
Q 007641 434 ---------G-IPAISAVMGTER-LPFPG----IVFDAVHCARCRVPW-HIE--GGKLLLELNRVLRPGGFFIWSATPVY 495 (595)
Q Consensus 434 ---------g-i~~~~~v~d~~~-LPfpd----~sFDlV~~~~c~v~~-h~d--~~~lL~El~RvLKPGG~Lvis~pp~~ 495 (595)
+ ..+.+...|+.. +|..+ ..||+|+.-. +.+- +++ ...+|..+.|+|||||+|+....
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa--- 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFTS--- 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC---
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC---
Confidence 0 122344455432 44322 2799999853 1211 112 26899999999999999985221
Q ss_pred CcCchhHHHHHHHHHHHHHcCCEEEEE
Q 007641 496 QKLPEDVEIWNAMSQLIKAMCWELVSI 522 (595)
Q Consensus 496 ~~l~e~i~~w~~le~Lak~~Gw~~v~~ 522 (595)
. ..+...+..+||.+...
T Consensus 215 ----a-----~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 215 ----A-----GFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp ----B-----HHHHHHHHHHTEEEEEE
T ss_pred ----C-----HHHHHHHHHCCCEEEeC
Confidence 1 25666777889996654
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.96 E-value=1.6e-06 Score=87.56 Aligned_cols=72 Identities=14% Similarity=0.027 Sum_probs=51.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC--CcEEEeCCc-------hhHHHHHHHHHHHcCC-C-eeEeecCCCC-CC-CCC--Cc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--GVLTMSFAP-------KDEHEAQVQFALERGI-P-AISAVMGTER-LP-FPG--IV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~V~giDisp-------~di~~aqvq~A~ergi-~-~~~~v~d~~~-LP-fpd--~s 453 (595)
++.+|||+|||+|.++..|+.+ .|+++|+++ .++..++.+.. ..++ . +.+...+... ++ +++ .+
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~-~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPE-TQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHH-HHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHH-hhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 4679999999999999999985 799999999 66655543322 2222 2 4556666544 33 444 68
Q ss_pred eeEEEecc
Q 007641 454 FDAVHCAR 461 (595)
Q Consensus 454 FDlV~~~~ 461 (595)
||+|++..
T Consensus 162 fD~V~~dP 169 (258)
T 2r6z_A 162 PDIVYLDP 169 (258)
T ss_dssp CSEEEECC
T ss_pred ccEEEECC
Confidence 99999986
No 276
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.94 E-value=1.7e-05 Score=80.91 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=52.8
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC--C----cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR--G----VLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE 445 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r--~----V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~ 445 (595)
.+++.|.+.+.. .++.+|||||||+|.++..|+.+ . |+++|+++.++..++.+ + ...+.+...|+.
T Consensus 29 ~i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~---~~~v~~i~~D~~ 100 (279)
T 3uzu_A 29 GVIDAIVAAIRP----ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F---GELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H---GGGEEEEESCGG
T ss_pred HHHHHHHHhcCC----CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c---CCCcEEEECChh
Confidence 345555555542 35789999999999999999884 5 99999998887776644 2 234567777778
Q ss_pred CCCCCC
Q 007641 446 RLPFPG 451 (595)
Q Consensus 446 ~LPfpd 451 (595)
.++|++
T Consensus 101 ~~~~~~ 106 (279)
T 3uzu_A 101 TFDFGS 106 (279)
T ss_dssp GCCGGG
T ss_pred cCChhH
Confidence 777654
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.92 E-value=1.3e-05 Score=91.13 Aligned_cols=99 Identities=13% Similarity=-0.013 Sum_probs=64.8
Q ss_pred CCEEEEECCCCchhHHH---H---hh-----------CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCC--
Q 007641 390 TRVVLDVGCGVASFGGF---L---FD-----------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP-- 450 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~---L---a~-----------r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfp-- 450 (595)
...|||||||+|.+... . +. ..|++++.++..+...+...+...+-.+.++..+++.+.+|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 45899999999987532 1 12 17999999986554444333322223356666677766553
Q ss_pred ---CCceeEEEecccCc-ccccCHHHHHHHHHHhccCCcEEE
Q 007641 451 ---GIVFDAVHCARCRV-PWHIEGGKLLLELNRVLRPGGFFI 488 (595)
Q Consensus 451 ---d~sFDlV~~~~c~v-~~h~d~~~lL~El~RvLKPGG~Lv 488 (595)
....|+|++-.... ....-...+|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 47899999965211 111122578888899999999877
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.92 E-value=8.5e-06 Score=81.95 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=53.7
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC-C--cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR-G--VLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP 448 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r-~--V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP 448 (595)
.+++.|.+.+.. .++.+|||||||+|.++. |... . |+++|+++.++..++.+... ...+.+...|...++
T Consensus 8 ~i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~--~~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINP----QKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFL--GPKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCC----CTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTT--GGGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCC----CCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhcc--CCceEEEECchhhCC
Confidence 345555555442 357799999999999999 7653 5 99999998766544322211 113556667777777
Q ss_pred CCCC-----ceeEEEecc
Q 007641 449 FPGI-----VFDAVHCAR 461 (595)
Q Consensus 449 fpd~-----sFDlV~~~~ 461 (595)
+++. ..|+|+++.
T Consensus 81 ~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHHHHHTSCEEEEEEC
T ss_pred HHHhhcccCCceEEEECC
Confidence 6432 346777764
No 279
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.86 E-value=0.00028 Score=74.90 Aligned_cols=141 Identities=11% Similarity=0.011 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
.++.+||||||++|.|+..|+++ .|++||+.+.+.. . .....+.+...+...+..+...||+|+|-. +.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~------l-~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm--~~ 280 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQS------L-MDTGQVTWLREDGFKFRPTRSNISWMVCDM--VE 280 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHH------H-HTTTCEEEECSCTTTCCCCSSCEEEEEECC--SS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChh------h-ccCCCeEEEeCccccccCCCCCcCEEEEcC--CC
Confidence 46899999999999999999987 7999998764321 1 112235566666666666667899999975 22
Q ss_pred cccCHHHHHHHHHHhccCC---cEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEE-eecccCceEEEEE-EeCCC
Q 007641 466 WHIEGGKLLLELNRVLRPG---GFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSI-SKDTINKVGIAVY-RKPTS 540 (595)
Q Consensus 466 ~h~d~~~lL~El~RvLKPG---G~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~-~~~~l~~~giaI~-~KP~~ 540 (595)
++..++.-+.+.|..| +.++..-.+.-.....-...+..+...+...||..... +...-+...+++| +||..
T Consensus 281 ---~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~l~akhL~hdReEiTV~~rk~~a 357 (375)
T 4auk_A 281 ---KPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWA 357 (375)
T ss_dssp ---CHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTCSSEEEEEEEECCC
T ss_pred ---ChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcchhheehhhccCCcEEEEEEEechh
Confidence 4555666666666555 44443322221122222233567777888888764322 2222233445554 45544
No 280
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.82 E-value=3.2e-05 Score=82.54 Aligned_cols=102 Identities=16% Similarity=0.114 Sum_probs=63.8
Q ss_pred CCEEEEECCCCchhHHHHhhC---------------------CcEEEeCCchhHHHHHH------H-HHHHcC--CCeeE
Q 007641 390 TRVVLDVGCGVASFGGFLFDR---------------------GVLTMSFAPKDEHEAQV------Q-FALERG--IPAIS 439 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r---------------------~V~giDisp~di~~aqv------q-~A~erg--i~~~~ 439 (595)
..+|+|+||++|..+..++.. .|..-|+..+|...-.. + .....| .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999877666542 24455666555522211 1 112223 22233
Q ss_pred ee--cC-CCCCCCCCCceeEEEecccCcccccCHH---------------------------------------HHHHHH
Q 007641 440 AV--MG-TERLPFPGIVFDAVHCARCRVPWHIEGG---------------------------------------KLLLEL 477 (595)
Q Consensus 440 ~v--~d-~~~LPfpd~sFDlV~~~~c~v~~h~d~~---------------------------------------~lL~El 477 (595)
.. .+ .....||+++||+||++. .+||..+.. .+|+-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY-CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES-CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc-eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22 245568999999999996 478854221 126666
Q ss_pred HHhccCCcEEEEEeC
Q 007641 478 NRVLRPGGFFIWSAT 492 (595)
Q Consensus 478 ~RvLKPGG~Lvis~p 492 (595)
+|.|+|||+|+++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 212 SEELISRGRMLLTFI 226 (384)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhccCCeEEEEEe
Confidence 899999999999853
No 281
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.77 E-value=1.2e-05 Score=82.06 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=61.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
++.+|||||||+|.|+.+++.+ .|+|+|+...+...+. .. ...+..++....+..-..++...||+|+|..+
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi-~~-~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA-- 165 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPI-MR-TTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG-- 165 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC-CC-CBTTGGGEEEECSCCGGGSCCCCCSEEEECCC--
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccc-cc-ccCCCceEEeeCCcchhhcCCCCcCEEEecCc--
Confidence 5779999999999999998864 5788888643210000 00 00122233333332333456688999999752
Q ss_pred cccc----CH---HHHHHHHHHhccCC--cEEEEEe
Q 007641 465 PWHI----EG---GKLLLELNRVLRPG--GFFIWSA 491 (595)
Q Consensus 465 ~~h~----d~---~~lL~El~RvLKPG--G~Lvis~ 491 (595)
+..- |. -.+|.-+.++|+|| |.|++-.
T Consensus 166 pnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 166 ESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 2221 21 13566678999999 9999865
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.66 E-value=3e-05 Score=83.43 Aligned_cols=106 Identities=14% Similarity=0.046 Sum_probs=68.0
Q ss_pred CCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHc-CCC-eeEeecCCCC-CCC-CCCceeEEEecccC
Q 007641 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALER-GIP-AISAVMGTER-LPF-PGIVFDAVHCARCR 463 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~er-gi~-~~~~v~d~~~-LPf-pd~sFDlV~~~~c~ 463 (595)
+.+|||+|||+|.++.+|++. .|+++|+++.++..++.+..... ++. +.+...+... ++. ++..||+|++...+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPAR 173 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCEE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCCC
Confidence 789999999999999999885 79999999999888876554331 543 4556666554 232 33579999997522
Q ss_pred cc------ccc-CHHHHHHHHHHhc-cCCcEEEEEeCCCC
Q 007641 464 VP------WHI-EGGKLLLELNRVL-RPGGFFIWSATPVY 495 (595)
Q Consensus 464 v~------~h~-d~~~lL~El~RvL-KPGG~Lvis~pp~~ 495 (595)
-. +.+ +..--+..+.++| +.+..++|-.+|..
T Consensus 174 r~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP~l 213 (410)
T 3ll7_A 174 RSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSPMI 213 (410)
T ss_dssp C-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECTTS
T ss_pred cCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCCCC
Confidence 11 111 1112344555543 44556666666544
No 283
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.63 E-value=3.4e-05 Score=78.00 Aligned_cols=93 Identities=14% Similarity=-0.022 Sum_probs=56.9
Q ss_pred CEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHH--HHHc----C-C--CeeEeecCCCC-CCCCCCceeEEE
Q 007641 391 RVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQF--ALER----G-I--PAISAVMGTER-LPFPGIVFDAVH 458 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~--A~er----g-i--~~~~~v~d~~~-LPfpd~sFDlV~ 458 (595)
.+|||+|||+|.++..|+.+ .|+++|+++.....+...+ +... + + .+.+...+... ++.....||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 79999999999999999874 7999999987543333222 2111 1 1 24455555433 342223699999
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCc
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGG 485 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG 485 (595)
+...+ ++ .....++.+..++||+.+
T Consensus 170 lDP~y-~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 170 LDPMF-PH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ECCCC-CC-CCC-----HHHHHHHHHS
T ss_pred EcCCC-CC-cccchHHHHHHHHHHHhh
Confidence 98632 32 233466777778887755
No 284
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.61 E-value=0.00037 Score=68.10 Aligned_cols=92 Identities=12% Similarity=-0.023 Sum_probs=61.8
Q ss_pred CCEEEEECCCCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCC----CeeEeecCCCC---------------C
Q 007641 390 TRVVLDVGCGVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGI----PAISAVMGTER---------------L 447 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi----~~~~~v~d~~~---------------L 447 (595)
.++||+|||| ..+..|++ ..|++++.++.....++..++ ..|+ .+.+...++.. +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~-~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLA-ANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHH-HSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 6799999985 56666665 379999999887776665554 3443 23444444321 2
Q ss_pred C--------C-CCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 448 P--------F-PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 448 P--------f-pd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
+ . ..+.||+|+.-. . ....++..+.+.|+|||++++.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg-~-----k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDG-R-----FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECS-S-----SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeC-C-----CchhHHHHHHHhcCCCeEEEEe
Confidence 2 2 236899999864 1 1236666778999999999764
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.60 E-value=9.6e-05 Score=76.05 Aligned_cols=99 Identities=17% Similarity=0.166 Sum_probs=61.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
++.+||||||++|.|+.+++++ .|+|+|+...+...... ....+.+++....+..-..+....||+|+|.. .
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~--A 156 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDI--G 156 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEECSCCTTTSCCCCCSEEEECC--C
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCceEEeecCceeeecCCCCcCEEeecC--c
Confidence 6889999999999999999985 57788886432100000 00001122333333232344567899999965 2
Q ss_pred cccc----CH---HHHHHHHHHhccCC-cEEEEEe
Q 007641 465 PWHI----EG---GKLLLELNRVLRPG-GFFIWSA 491 (595)
Q Consensus 465 ~~h~----d~---~~lL~El~RvLKPG-G~Lvis~ 491 (595)
+... |. ..+|.-+.++|+|| |.|++-.
T Consensus 157 PnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 157 ESSSNPLVERDRTMKVLENFERWKHVNTENFCVKV 191 (300)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 2221 11 24566678999999 9999874
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.60 E-value=0.00054 Score=70.17 Aligned_cols=136 Identities=14% Similarity=0.053 Sum_probs=82.8
Q ss_pred CCCEEEEECCCCchhHHHHh---------hCCcEEEeCCch--------------------------hHHHHHHHHHHHc
Q 007641 389 RTRVVLDVGCGVASFGGFLF---------DRGVLTMSFAPK--------------------------DEHEAQVQFALER 433 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La---------~r~V~giDisp~--------------------------di~~aqvq~A~er 433 (595)
..++||+||+..|..+..|+ .+.|+++|.... .+..++..+ ...
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~-~~~ 184 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNF-RNY 184 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHH-HHT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHH-HHc
Confidence 36799999999998777664 347999996421 122233233 334
Q ss_pred CC--C-eeEeecCC-CCCC-CCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHH
Q 007641 434 GI--P-AISAVMGT-ERLP-FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAM 508 (595)
Q Consensus 434 gi--~-~~~~v~d~-~~LP-fpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~l 508 (595)
|+ . +.+...+. +.|| ++...||+|+.-. - .......+|..+.+.|+|||++++... .+.+ ....++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa-D--~y~~~~~~Le~~~p~L~pGGiIv~DD~---~~~~---G~~~Av 255 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG-D--LYESTWDTLTNLYPKVSVGGYVIVDDY---MMCP---PCKDAV 255 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC-C--SHHHHHHHHHHHGGGEEEEEEEEESSC---TTCH---HHHHHH
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC-C--ccccHHHHHHHHHhhcCCCEEEEEcCC---CCCH---HHHHHH
Confidence 44 2 44555543 3444 4457899999863 1 222335789999999999999998653 1122 234566
Q ss_pred HHHHHHcCCEEEEEeecccCceEEEEEEeC
Q 007641 509 SQLIKAMCWELVSISKDTINKVGIAVYRKP 538 (595)
Q Consensus 509 e~Lak~~Gw~~v~~~~~~l~~~giaI~~KP 538 (595)
.++.+..++........ .+.+.|+|+
T Consensus 256 ~Ef~~~~~i~~~i~~~~----~~~v~~rk~ 281 (282)
T 2wk1_A 256 DEYRAKFDIADELITID----RDGVYWQRT 281 (282)
T ss_dssp HHHHHHTTCCSCCEECS----SSCEEEECC
T ss_pred HHHHHhcCCceEEEEec----CEEEEEEeC
Confidence 66777788654322221 235667764
No 287
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.59 E-value=3.3e-05 Score=81.77 Aligned_cols=102 Identities=17% Similarity=0.259 Sum_probs=66.2
Q ss_pred CCCEEEEECCCCchhHHHHhhC--------------------CcEEEeCCchhHHHHHHHHHH---HcCCCeeEeecC-C
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--------------------GVLTMSFAPKDEHEAQVQFAL---ERGIPAISAVMG-T 444 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--------------------~V~giDisp~di~~aqvq~A~---ergi~~~~~v~d-~ 444 (595)
...+|+|+||++|..+..+... .|..-|+..+|.......... ..+.-....+.+ .
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3567999999999765444331 466778888877554322111 001111222223 3
Q ss_pred CCCCCCCCceeEEEecccCcccccCH---------------------------------HHHHHHHHHhccCCcEEEEEe
Q 007641 445 ERLPFPGIVFDAVHCARCRVPWHIEG---------------------------------GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 445 ~~LPfpd~sFDlV~~~~c~v~~h~d~---------------------------------~~lL~El~RvLKPGG~Lvis~ 491 (595)
....||+++||+||++. .+||..+. ..+|+-.++.|+|||+|+++.
T Consensus 131 y~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehh-hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 45678999999999996 57785321 245888999999999999884
No 288
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.59 E-value=3.2e-05 Score=79.89 Aligned_cols=72 Identities=8% Similarity=0.074 Sum_probs=52.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC--CC---CCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP--FP---GIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP--fp---d~sFDlV~~ 459 (595)
++.+|||+|||+|.++..|+++ .|+|+|+++.++..++.+.. ..+..+.+...+...++ +. ...||+|++
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~-~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLK-EFSDRVSLFKVSYREADFLLKTLGIEKVDGILM 104 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTG-GGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEE
Confidence 5789999999999999999874 69999999988877764433 22334566666666554 11 157999997
Q ss_pred cc
Q 007641 460 AR 461 (595)
Q Consensus 460 ~~ 461 (595)
..
T Consensus 105 D~ 106 (301)
T 1m6y_A 105 DL 106 (301)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.58 E-value=0.00028 Score=78.19 Aligned_cols=118 Identities=17% Similarity=0.079 Sum_probs=77.5
Q ss_pred HHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhh-----------------CCcEEEeCCchhHHHHHHHHHHHcC
Q 007641 372 HYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFD-----------------RGVLTMSFAPKDEHEAQVQFALERG 434 (595)
Q Consensus 372 ~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~-----------------r~V~giDisp~di~~aqvq~A~erg 434 (595)
..+++|.+++.. .++.+|||-.||+|.|...+.+ ..+.|+|+.+.....+..+......
T Consensus 204 ~Vv~lmv~l~~p----~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 204 PVVRFMVEVMDP----QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL 279 (530)
T ss_dssp HHHHHHHHHHCC----CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhcc----CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC
Confidence 445666665542 4577999999999999865543 2589999998887777666555332
Q ss_pred CCeeEeecCCCCCCC----CCCceeEEEecccCccccc--------------CH-HHHHHHHHHhcc-------CCcEEE
Q 007641 435 IPAISAVMGTERLPF----PGIVFDAVHCARCRVPWHI--------------EG-GKLLLELNRVLR-------PGGFFI 488 (595)
Q Consensus 435 i~~~~~v~d~~~LPf----pd~sFDlV~~~~c~v~~h~--------------d~-~~lL~El~RvLK-------PGG~Lv 488 (595)
-...+...+....|+ +...||+|+++.++-.... +. ..++..+.+.|| |||++.
T Consensus 280 ~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~a 359 (530)
T 3ufb_A 280 EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAA 359 (530)
T ss_dssp SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEE
T ss_pred ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEE
Confidence 223344444444332 2357999999986532110 11 256777888887 799999
Q ss_pred EEeCC
Q 007641 489 WSATP 493 (595)
Q Consensus 489 is~pp 493 (595)
+..|.
T Consensus 360 vVlP~ 364 (530)
T 3ufb_A 360 VVVPN 364 (530)
T ss_dssp EEEEH
T ss_pred EEecc
Confidence 98764
No 290
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.44 E-value=0.00085 Score=70.96 Aligned_cols=108 Identities=15% Similarity=0.135 Sum_probs=71.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCC-------CeeEeecCCCCCC-CCCCcee
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGI-------PAISAVMGTERLP-FPGIVFD 455 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi-------~~~~~v~d~~~LP-fpd~sFD 455 (595)
.++.+|||+.||.|.-+.+|+.. .|+++|+++.-+.....+ +...++ .+.+...|...++ +..+.||
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~-l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKI-LHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHH-HHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHH-HHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 46889999999999988888874 589999997654333322 222222 3445555555443 3457899
Q ss_pred EEEecc-cCc------------ccccCH----------HHHHHHHHHhccCCcEEEEEeCCCCC
Q 007641 456 AVHCAR-CRV------------PWHIEG----------GKLLLELNRVLRPGGFFIWSATPVYQ 496 (595)
Q Consensus 456 lV~~~~-c~v------------~~h~d~----------~~lL~El~RvLKPGG~Lvis~pp~~~ 496 (595)
.|++-. |.- .|.... ..+|..+.++|||||+|+.++-.+..
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 999632 321 111111 26888899999999999988765443
No 291
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.35 E-value=0.00066 Score=63.31 Aligned_cols=79 Identities=13% Similarity=0.089 Sum_probs=54.3
Q ss_pred CCEEEEECCCCc-hhHHHHhh-C--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCC--CceeEEEecccC
Q 007641 390 TRVVLDVGCGVA-SFGGFLFD-R--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPG--IVFDAVHCARCR 463 (595)
Q Consensus 390 ~~rVLDIGCGtG-~~a~~La~-r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd--~sFDlV~~~~c~ 463 (595)
+.+|||||||.| ..+.+|++ . .|+++||++..+. +...|... |..+ ..||+|++.++
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------~v~dDiF~-P~~~~Y~~~DLIYsirP- 98 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------IVRDDITS-PRMEIYRGAALIYSIRP- 98 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------EECCCSSS-CCHHHHTTEEEEEEESC-
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------eEEccCCC-CcccccCCcCEEEEcCC-
Confidence 579999999999 59999987 5 5899999987543 33333433 4332 37999998762
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
..+....|.++.+.+. .-|+|.
T Consensus 99 ---P~El~~~i~~lA~~v~--adliI~ 120 (153)
T 2k4m_A 99 ---PAEIHSSLMRVADAVG--ARLIIK 120 (153)
T ss_dssp ---CTTTHHHHHHHHHHHT--CEEEEE
T ss_pred ---CHHHHHHHHHHHHHcC--CCEEEE
Confidence 3355666667666553 455554
No 292
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.27 E-value=0.0014 Score=69.85 Aligned_cols=146 Identities=15% Similarity=0.041 Sum_probs=80.9
Q ss_pred CCccccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHH---Hc-C
Q 007641 362 GGTQFKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFAL---ER-G 434 (595)
Q Consensus 362 gg~~F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~---er-g 434 (595)
|..++......|...|... +.+. .+.++||=||.|.|..++.+++. .|+.++|++..+..++.-+.. .. .
T Consensus 181 G~~Q~te~D~~Y~e~l~h~-~l~~--~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d 257 (381)
T 3c6k_A 181 GDVNLAESDLAYTRAIMGS-GKED--YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLD 257 (381)
T ss_dssp TEEEEETTCHHHHHHHTTT-TCCC--CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCS
T ss_pred CceeeeCChHHHHHHHHHH-Hhhc--CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhc
Confidence 3334433323455554333 2222 24689999999999999999885 689999997765544322110 00 0
Q ss_pred ----CCeeEeecCCCC----CCCCCCceeEEEecccC-----cccccC----HHHHHHHHHHhccCCcEEEEEeCCCCCc
Q 007641 435 ----IPAISAVMGTER----LPFPGIVFDAVHCARCR-----VPWHIE----GGKLLLELNRVLRPGGFFIWSATPVYQK 497 (595)
Q Consensus 435 ----i~~~~~v~d~~~----LPfpd~sFDlV~~~~c~-----v~~h~d----~~~lL~El~RvLKPGG~Lvis~pp~~~~ 497 (595)
..+.+.+.|... ..-..+.||+|+.-..- .+..+. ...++..+.++|+|||+|+.-....+
T Consensus 258 ~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~-- 335 (381)
T 3c6k_A 258 NLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN-- 335 (381)
T ss_dssp SSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT--
T ss_pred cccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCc--
Confidence 112344444321 11124579999975210 111111 14778889999999999987543222
Q ss_pred CchhHHHHHHHHHHHHHc
Q 007641 498 LPEDVEIWNAMSQLIKAM 515 (595)
Q Consensus 498 l~e~i~~w~~le~Lak~~ 515 (595)
+. .....+.+.+++.
T Consensus 336 ~~---~~~~~i~~tl~~v 350 (381)
T 3c6k_A 336 LT---EALSLYEEQLGRL 350 (381)
T ss_dssp CH---HHHHHHHHHHTTS
T ss_pred ch---hHHHHHHHHHHHh
Confidence 12 2234455555554
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.27 E-value=0.0014 Score=66.29 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=65.5
Q ss_pred ccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHH-cCCCeeEe
Q 007641 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALE-RGIPAISA 440 (595)
Q Consensus 366 F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~e-rgi~~~~~ 440 (595)
|...+..-+..|.+.. .+ +++.+|||+||+.|.++.+++++ .|.|..+... ++.. ..... .|+.++.+
T Consensus 54 yRSRAayKL~EIdeK~-li---kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D-~~~~--P~~~~~~Gv~~i~~ 126 (269)
T 2px2_A 54 PVSRGTAKLRWLVERR-FV---QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGP-GHEE--PMLMQSYGWNIVTM 126 (269)
T ss_dssp CSSTHHHHHHHHHHTT-SC---CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCST-TSCC--CCCCCSTTGGGEEE
T ss_pred cccHHHHHHHHHHHcC-CC---CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccc-cccC--CCcccCCCceEEEe
Confidence 4454544455565553 22 46899999999999999999886 2345555422 1000 00000 12233333
Q ss_pred e-c-CCCCCCCCCCceeEEEecccCccccc----CHH---HHHHHHHHhccCCc-EEEEEe
Q 007641 441 V-M-GTERLPFPGIVFDAVHCARCRVPWHI----EGG---KLLLELNRVLRPGG-FFIWSA 491 (595)
Q Consensus 441 v-~-d~~~LPfpd~sFDlV~~~~c~v~~h~----d~~---~lL~El~RvLKPGG-~Lvis~ 491 (595)
. . |...+ ....||+|+|-.. +... |.. .+|.-+.++|+||| .|++=.
T Consensus 127 ~~G~Df~~~--~~~~~DvVLSDMA--PnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 127 KSGVDVFYK--PSEISDTLLCDIG--ESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp ECSCCGGGS--CCCCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred eccCCccCC--CCCCCCEEEeCCC--CCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 3 2 44443 3457999999652 2221 211 24555669999999 888754
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.83 E-value=0.03 Score=57.65 Aligned_cols=119 Identities=17% Similarity=0.197 Sum_probs=68.4
Q ss_pred CCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeec--CCCCCCCCCCceeEEEeccc
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVM--GTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~--d~~~LPfpd~sFDlV~~~~c 462 (595)
++.+||||||++|.|+.+++.. .|+|+|+-.......+ .....+.+.+.+.. +...++- ..+|+|+|.-.
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~--~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig 169 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ--LVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG 169 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC--CCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc--hhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc
Confidence 5779999999999999988874 6899999754211000 00011222233332 3345543 56999999642
Q ss_pred CcccccCH----H---HHHHHHHHhccCC-cEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCE
Q 007641 463 RVPWHIEG----G---KLLLELNRVLRPG-GFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWE 518 (595)
Q Consensus 463 ~v~~h~d~----~---~lL~El~RvLKPG-G~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~ 518 (595)
--...+ . .+|.-+.+.|++| |-|++-....| .++ ....+..+-...|=-
T Consensus 170 --eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY--~~~---v~e~l~~lq~~fgg~ 226 (321)
T 3lkz_A 170 --ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY--MPK---VIEKMELLQRRYGGG 226 (321)
T ss_dssp --CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT--SHH---HHHHHHHHHHHHCCE
T ss_pred --cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC--ChH---HHHHHHHHHHHhCCE
Confidence 112222 1 3566667899999 88888543222 222 224555555555533
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.75 E-value=0.0091 Score=59.83 Aligned_cols=115 Identities=15% Similarity=0.118 Sum_probs=68.4
Q ss_pred ccCchHHHHHHHHHhcccccCCCCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEee
Q 007641 366 FKNGALHYIDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAV 441 (595)
Q Consensus 366 F~~ga~~yid~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v 441 (595)
|...+..-+..|.+.. .+ .++.+||||||++|.|+.+++.. .|+|+|+-+......+ .....|.+.+.+.
T Consensus 59 yrSRa~~KL~ei~ek~-~l---~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~--~~~s~gwn~v~fk 132 (267)
T 3p8z_A 59 AVSRGSAKLQWFVERN-MV---IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV--PMSTYGWNIVKLM 132 (267)
T ss_dssp CSSTHHHHHHHHHHTT-SS---CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC--CCCCTTTTSEEEE
T ss_pred ccchHHHHHHHHHHhc-CC---CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc--hhhhcCcCceEEE
Confidence 4443433344444444 22 35779999999999999988874 6999999764321100 0112344544444
Q ss_pred c--CCCCCCCCCCceeEEEecccCcccccCH----H---HHHHHHHHhccCCcEEEEEe
Q 007641 442 M--GTERLPFPGIVFDAVHCARCRVPWHIEG----G---KLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 442 ~--d~~~LPfpd~sFDlV~~~~c~v~~h~d~----~---~lL~El~RvLKPGG~Lvis~ 491 (595)
. |...++ ...||.|+|... .-+..+ . .+|.-+.+.|++ |.|++-.
T Consensus 133 ~gvDv~~~~--~~~~DtllcDIg--eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 133 SGKDVFYLP--PEKCDTLLCDIG--ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp CSCCGGGCC--CCCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred eccceeecC--CccccEEEEecC--CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 3 334443 256999999641 222222 1 356666789999 7888754
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.07 E-value=0.012 Score=59.78 Aligned_cols=44 Identities=27% Similarity=0.212 Sum_probs=36.6
Q ss_pred CCCEEEEECCCCchhHHHHhh--CCcEEEeCCchhHHHHHHHHHHH
Q 007641 389 RTRVVLDVGCGVASFGGFLFD--RGVLTMSFAPKDEHEAQVQFALE 432 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~--r~V~giDisp~di~~aqvq~A~e 432 (595)
++.+|||++||+|.++..++. +.++|+|+++.++..+..++...
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 578999999999999988877 48999999998887776555443
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.68 E-value=0.021 Score=58.01 Aligned_cols=92 Identities=16% Similarity=0.146 Sum_probs=55.5
Q ss_pred eEeecCCCC-CC-CCCCceeEEEecccCccccc-------------------CHHHHHHHHHHhccCCcEEEEEeCCCCC
Q 007641 438 ISAVMGTER-LP-FPGIVFDAVHCARCRVPWHI-------------------EGGKLLLELNRVLRPGGFFIWSATPVYQ 496 (595)
Q Consensus 438 ~~~v~d~~~-LP-fpd~sFDlV~~~~c~v~~h~-------------------d~~~lL~El~RvLKPGG~Lvis~pp~~~ 496 (595)
.+...|... ++ +++++||+|+++.++..... ....++.++.|+|||||.|+|.....+.
T Consensus 23 ~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~ 102 (297)
T 2zig_A 23 RLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAV 102 (297)
T ss_dssp EEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEE
T ss_pred EEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCcc
Confidence 345555432 32 46789999999986542110 0135778999999999999988653321
Q ss_pred c-C--c--hhHHHHHHHHHHHHHcCCEEEEEeecccCceEEEEEEeCC
Q 007641 497 K-L--P--EDVEIWNAMSQLIKAMCWELVSISKDTINKVGIAVYRKPT 539 (595)
Q Consensus 497 ~-l--~--e~i~~w~~le~Lak~~Gw~~v~~~~~~l~~~giaI~~KP~ 539 (595)
. . . ..+.....+..+++..||..... .||.|+.
T Consensus 103 ~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~----------iiW~K~~ 140 (297)
T 2zig_A 103 ARRRFGRHLVFPLHADIQVRCRKLGFDNLNP----------IIWHKHT 140 (297)
T ss_dssp ECC----EEEECHHHHHHHHHHHTTCEEEEE----------EEEECC-
T ss_pred ccccCCcccccccHHHHHHHHHHcCCeeecc----------EEEeCCC
Confidence 0 0 0 00112346777888999976543 4677763
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.66 E-value=0.0048 Score=79.60 Aligned_cols=98 Identities=13% Similarity=0.091 Sum_probs=46.6
Q ss_pred CCCEEEEECCCCchhHHHHhh---------CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC-CCCCCCceeEEE
Q 007641 389 RTRVVLDVGCGVASFGGFLFD---------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER-LPFPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~---------r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~-LPfpd~sFDlV~ 458 (595)
+..+||+||.|+|..+..++. ..++..|+++.....++.++.. +.+.....+... .+|....||+|+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---~di~~~~~d~~~~~~~~~~~ydlvi 1316 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---LHVTQGQWDPANPAPGSLGKADLLV 1316 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---HTEEEECCCSSCCCC-----CCEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---cccccccccccccccCCCCceeEEE
Confidence 467999999999976544432 1467778887766555544432 122222223222 244556799999
Q ss_pred ecccCccc-ccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 459 CARCRVPW-HIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~-h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+.. +++ ..+....|.+++++|||||+|++..
T Consensus 1317 a~~--vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1317 CNC--ALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEC--C--------------------CCEEEEEE
T ss_pred Ecc--cccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 975 333 3366789999999999999998864
No 299
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.63 E-value=0.087 Score=54.50 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=48.1
Q ss_pred EeecCC-CCCC-CCCCceeEEEecccCcccccCH----HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHH
Q 007641 439 SAVMGT-ERLP-FPGIVFDAVHCARCRVPWHIEG----GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLI 512 (595)
Q Consensus 439 ~~v~d~-~~LP-fpd~sFDlV~~~~c~v~~h~d~----~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~La 512 (595)
+...++ ..++ +.+..||+|+.-. +-+ ..+| ..+|..|+|+|+|||.|+-... -..+.+-|
T Consensus 170 l~~GDa~~~l~~l~~~~~Da~flDg-FsP-~kNPeLWs~e~f~~l~~~~~pgg~laTYta------------ag~VRR~L 235 (308)
T 3vyw_A 170 VLLGDARKRIKEVENFKADAVFHDA-FSP-YKNPELWTLDFLSLIKERIDEKGYWVSYSS------------SLSVRKSL 235 (308)
T ss_dssp EEESCHHHHGGGCCSCCEEEEEECC-SCT-TTSGGGGSHHHHHHHHTTEEEEEEEEESCC------------CHHHHHHH
T ss_pred EEechHHHHHhhhcccceeEEEeCC-CCc-ccCcccCCHHHHHHHHHHhCCCcEEEEEeC------------cHHHHHHH
Confidence 344443 3343 3445799999864 222 2234 6999999999999999983211 14677789
Q ss_pred HHcCCEEEEEee
Q 007641 513 KAMCWELVSISK 524 (595)
Q Consensus 513 k~~Gw~~v~~~~ 524 (595)
..+||.+.....
T Consensus 236 ~~aGF~V~k~~G 247 (308)
T 3vyw_A 236 LTLGFKVGSSRE 247 (308)
T ss_dssp HHTTCEEEEEEC
T ss_pred HHCCCEEEecCC
Confidence 999999766544
No 300
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=95.19 E-value=0.014 Score=59.69 Aligned_cols=69 Identities=14% Similarity=0.092 Sum_probs=48.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----CCCCceeEEEec
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----FPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----fpd~sFDlV~~~ 460 (595)
.++..+||.+||.|..+..|+++ .|+|+|.++..+..++. ++ . ..+.+...+...++ .....||.|++.
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~--~-~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LH--L-PGLTVVQGNFRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TC--C-TTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hc--c-CCEEEEECCcchHHHHHHHcCCCCcCEEEeC
Confidence 35789999999999999999985 79999999887765543 21 1 23444554444332 122579999964
No 301
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.16 E-value=0.051 Score=56.08 Aligned_cols=73 Identities=16% Similarity=0.141 Sum_probs=48.3
Q ss_pred CCCCceeEEEecccCcccc-------------cCHHHHHHHHHHhccCCcEEEEEeCCCCCcC--chhHHHHHHHHHHHH
Q 007641 449 FPGIVFDAVHCARCRVPWH-------------IEGGKLLLELNRVLRPGGFFIWSATPVYQKL--PEDVEIWNAMSQLIK 513 (595)
Q Consensus 449 fpd~sFDlV~~~~c~v~~h-------------~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l--~e~i~~w~~le~Lak 513 (595)
+++++||+|++..++.... .....+|.+++|+|+|||.|+|.....+..- ...+..+..+..++.
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~ 108 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMID 108 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHH
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHH
Confidence 4578999999987543211 0135788999999999999999865432110 011234555666788
Q ss_pred HcCCEEEE
Q 007641 514 AMCWELVS 521 (595)
Q Consensus 514 ~~Gw~~v~ 521 (595)
..||..+.
T Consensus 109 ~~Gf~~~~ 116 (323)
T 1boo_A 109 EVGFFLAE 116 (323)
T ss_dssp TTCCEEEE
T ss_pred hCCCEEEE
Confidence 89997654
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=93.80 E-value=0.16 Score=52.37 Aligned_cols=91 Identities=10% Similarity=-0.027 Sum_probs=55.0
Q ss_pred CCCEEEEECC------CCchhHH-HHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEe
Q 007641 389 RTRVVLDVGC------GVASFGG-FLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGC------GtG~~a~-~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~ 459 (595)
.+.+|||+|+ -.|++.. .+... .|+++|+.+... ..+ .++..|...+. ..+.||+|++
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~-~~~k~DLVIS 175 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVH-TANKWDLIIS 175 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEE-ESSCEEEEEE
T ss_pred CCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEccccccc-cCCCCCEEEe
Confidence 4889999997 5666432 23223 589999987531 112 44555543332 2477999998
Q ss_pred cccC-ccccc--------CH-HHHHHHHHHhccCCcEEEEEeC
Q 007641 460 ARCR-VPWHI--------EG-GKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 460 ~~c~-v~~h~--------d~-~~lL~El~RvLKPGG~Lvis~p 492 (595)
-..- ..-+. .. ..+|.=+.++|+|||.|++=..
T Consensus 176 DMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 176 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp CCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 5410 00011 12 3555557789999999998753
No 303
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.03 E-value=0.27 Score=55.55 Aligned_cols=59 Identities=17% Similarity=0.235 Sum_probs=41.1
Q ss_pred CCceeEEEecccCcccccCH----HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 451 GIVFDAVHCARCRVPWHIEG----GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 451 d~sFDlV~~~~c~v~~h~d~----~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
...||+++.-. +-+ ..++ ..+|..|.|+++|||.|.-.... ..+.+.+..+||.+....
T Consensus 169 ~~~~da~flD~-f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~------------~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 169 NNQVDAWFLDG-FAP-AKNPDMWNEQLFNAMARMTRPGGTFSTFTAA------------GFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp TTCEEEEEECS-SCC---CCTTCSHHHHHHHHHHEEEEEEEEESCCC------------HHHHHHHHHTTCEEEEEE
T ss_pred CCceeEEEECC-CCC-CCChhhhhHHHHHHHHHHhCCCCEEEeccCc------------HHHHHHHHhCCeEEEecc
Confidence 46799999864 222 2222 68999999999999988743211 367777889999876654
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.92 E-value=0.26 Score=48.85 Aligned_cols=63 Identities=8% Similarity=-0.133 Sum_probs=41.7
Q ss_pred CCCceeEEEecccCccccc-------------CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcC
Q 007641 450 PGIVFDAVHCARCRVPWHI-------------EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMC 516 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h~-------------d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~G 516 (595)
++++||+|++..++..-.. -...+|.+++|+|+|||.+++.... .....+..++...|
T Consensus 20 ~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d---------~~~~~~~~~~~~~g 90 (260)
T 1g60_A 20 ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP---------FNCAFICQYLVSKG 90 (260)
T ss_dssp CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH---------HHHHHHHHHHHHTT
T ss_pred cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc---------HHHHHHHHHHHhhc
Confidence 4578999999875432100 1246788899999999999987421 11234455677889
Q ss_pred CEEEE
Q 007641 517 WELVS 521 (595)
Q Consensus 517 w~~v~ 521 (595)
|....
T Consensus 91 f~~~~ 95 (260)
T 1g60_A 91 MIFQN 95 (260)
T ss_dssp CEEEE
T ss_pred cceeE
Confidence 96544
No 305
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.86 E-value=0.24 Score=51.32 Aligned_cols=92 Identities=8% Similarity=0.010 Sum_probs=60.0
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC---CCC-CCCCCceeEEE
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---ERL-PFPGIVFDAVH 458 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~---~~L-Pfpd~sFDlV~ 458 (595)
.++.+||-+|||. |.++..|++. .|++++.++ .+.+++++.|....+...+. ..+ .+..+.||+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~-----~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vi 263 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVE-----SRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFAL 263 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCH-----HHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCH-----HHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEE
Confidence 4678999999874 6777777662 478888874 34566777776543322110 011 11123699998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-.- .....+..+.++|+|||++++..
T Consensus 264 d~~-------g~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 264 EST-------GSPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp ECS-------CCHHHHHHHHHTEEEEEEEEECC
T ss_pred ECC-------CCHHHHHHHHHHHhcCCEEEEeC
Confidence 642 12367888999999999999874
No 306
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.68 E-value=0.19 Score=51.83 Aligned_cols=92 Identities=13% Similarity=0.100 Sum_probs=59.2
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeec-----C-CCCC-CCCCCcee
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVM-----G-TERL-PFPGIVFD 455 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~-----d-~~~L-Pfpd~sFD 455 (595)
.++.+||-+|+|. |.++..|++. .|++++.++ ...+++++.|....+... + ...+ ......||
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~-----~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D 244 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSA-----TRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPE 244 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCC
Confidence 4578999999873 6677777662 578888774 345667777776433222 0 0011 00014699
Q ss_pred EEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 456 lV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+|+-.- .....+..+.++|+|||++++..
T Consensus 245 ~vid~~-------g~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 245 VTIECT-------GAEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp EEEECS-------CCHHHHHHHHHHSCTTCEEEECS
T ss_pred EEEECC-------CChHHHHHHHHHhcCCCEEEEEe
Confidence 998642 12356788899999999999875
No 307
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.49 E-value=0.22 Score=52.18 Aligned_cols=97 Identities=19% Similarity=0.105 Sum_probs=61.8
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC-----C-C-CCCCcee
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER-----L-P-FPGIVFD 455 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~-----L-P-fpd~sFD 455 (595)
.++.+||-+|||. |.++..|++. .|++++.++ ..++++++.|.. . +...... + . .....||
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~-----~~~~~a~~lGa~-~-i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNP-----ARLAHAKAQGFE-I-ADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHTTCE-E-EETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCH-----HHHHHHHHcCCc-E-EccCCcchHHHHHHHHhCCCCCC
Confidence 3678999999864 6777777763 478888874 455677777764 2 2211111 1 0 1123699
Q ss_pred EEEecccCc--------ccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 456 AVHCARCRV--------PWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 456 lV~~~~c~v--------~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+|+-.-..- .++.++...+..+.++|++||.+++..
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 998643211 123344568899999999999998764
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=92.26 E-value=0.74 Score=47.77 Aligned_cols=123 Identities=13% Similarity=0.133 Sum_probs=68.3
Q ss_pred CEEEEECCCCchhHHHHhhCC-----cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC---CCCCceeEEEeccc
Q 007641 391 RVVLDVGCGVASFGGFLFDRG-----VLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP---FPGIVFDAVHCARC 462 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r~-----V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP---fpd~sFDlV~~~~c 462 (595)
.+|||+.||.|.++..|..++ |.++|+++..+...+ .......+...|...+. ++...||+|+...+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~-----~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYK-----YNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHH-----HHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHH-----HhccccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 479999999999998887753 788999865433222 22222233445554442 11125899998762
Q ss_pred Cccccc--------C-HHHHHHHHHHh---cc--CCcEEEEE-eCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 463 RVPWHI--------E-GGKLLLELNRV---LR--PGGFFIWS-ATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 463 ~v~~h~--------d-~~~lL~El~Rv---LK--PGG~Lvis-~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
.-.+.. + ...++.++.|+ ++ |. +|++- ++.+.. ...+..+...+..+||.+....-
T Consensus 78 Cq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~-~~~~ENV~~l~~-----~~~~~~i~~~l~~~GY~v~~~vl 148 (343)
T 1g55_A 78 CQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK-YILLENVKGFEV-----SSTRDLLIQTIENCGFQYQEFLL 148 (343)
T ss_dssp ------------------CHHHHHHHHGGGCSSCCS-EEEEEEETTGGG-----SHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC-EEEEeCCccccC-----HHHHHHHHHHHHHCCCeeEEEEE
Confidence 111111 1 12355545444 45 65 33332 222211 14567788888999998765433
No 309
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.15 E-value=0.55 Score=52.77 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=41.6
Q ss_pred CCceeEEEecccCcccccCH----HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 451 GIVFDAVHCARCRVPWHIEG----GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 451 d~sFDlV~~~~c~v~~h~d~----~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
...||+|+.-. +.+ ..++ ..+|..|.|+++|||.|.-.... ..+.+.+..+||.+....
T Consensus 177 ~~~~d~~~~D~-f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~------------~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 177 NQKVDAWFLDG-FAP-AKNPDMWTQNLFNAMARLARPGGTLATFTSA------------GFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp TTCEEEEEECC-SCG-GGCGGGSCHHHHHHHHHHEEEEEEEEESCCC------------HHHHHHHHHHTCEEEEEE
T ss_pred CCcccEEEECC-CCC-cCChhhhhHHHHHHHHHHhCCCCEEEeccCc------------HHHHHHHHhCCeEEEecc
Confidence 36799999864 222 2233 68999999999999998743211 366777888999876543
No 310
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.12 E-value=0.23 Score=52.15 Aligned_cols=97 Identities=15% Similarity=0.056 Sum_probs=61.0
Q ss_pred CCCCEEEEECCCC-chhHHHHhh---C-CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC------C-CCCCcee
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFD---R-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL------P-FPGIVFD 455 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~---r-~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L------P-fpd~sFD 455 (595)
.++.+||-+|||. |.++..|++ . .|++++.++. +++++++.|.. .+......+ . .....||
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~--~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPE-----RLKLLSDAGFE--TIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHH-----HHHHHHTTTCE--EEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-----HHHHHHHcCCc--EEcCCCcchHHHHHHHHhCCCCCC
Confidence 4688999999975 777777776 2 6888888743 45666666763 222211111 0 1123699
Q ss_pred EEEecccCccc--------ccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 456 AVHCARCRVPW--------HIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 456 lV~~~~c~v~~--------h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+|+-.-. ... |..+...+..+.++|+|||++++...
T Consensus 257 vvid~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 257 CGVDAVG-FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEEECSC-TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred EEEECCC-CccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 9986431 111 11234578899999999999987643
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.09 E-value=0.21 Score=49.58 Aligned_cols=39 Identities=15% Similarity=0.139 Sum_probs=31.8
Q ss_pred CCCCEEEEECCCCchhHHHHhh--CCcEEEeCCchhHHHHH
Q 007641 388 KRTRVVLDVGCGVASFGGFLFD--RGVLTMSFAPKDEHEAQ 426 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~--r~V~giDisp~di~~aq 426 (595)
.++..|||..||+|..+...+. +.++|+|+++..+..+.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 3688999999999998877766 58999999987655544
No 312
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.00 E-value=0.12 Score=53.10 Aligned_cols=88 Identities=15% Similarity=0.014 Sum_probs=58.9
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccC
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
.++.+||-+|+|. |.++..|++. .|++++.++. ..+++++.|...++ .+...+ . ..||+|+-.-.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~v~--~~~~~~--~-~~~D~vid~~g- 243 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEH-----KKQDALSMGVKHFY--TDPKQC--K-EELDFIISTIP- 243 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSST-----THHHHHHTTCSEEE--SSGGGC--C-SCEEEEEECCC-
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHH-----HHHHHHhcCCCeec--CCHHHH--h-cCCCEEEECCC-
Confidence 3688999999863 6666666663 6888888765 34566677776554 222222 1 26999986421
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
....+..+.++|+|||.+++...
T Consensus 244 ------~~~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 ------THYDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ------SCCCHHHHHTTEEEEEEEEECCC
T ss_pred ------cHHHHHHHHHHHhcCCEEEEECC
Confidence 11256778899999999998753
No 313
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.87 E-value=0.17 Score=51.78 Aligned_cols=92 Identities=15% Similarity=0.090 Sum_probs=60.2
Q ss_pred CCCCEEEEECCC-CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC---CCCCCCCceeEEEec
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE---RLPFPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~---~LPfpd~sFDlV~~~ 460 (595)
.++.+||-+|+| .|.++..|++. .|++++.++ ...+++++.|....+...+.. .+--..+.+|+|+-.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~ 239 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDD-----AKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVT 239 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEe
Confidence 468899999987 47777777763 688888874 345667777765443222100 000011258888753
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
- -....+..+.++|+|||++++..
T Consensus 240 ~-------g~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 240 A-------VSPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp S-------CCHHHHHHHHHHEEEEEEEEECS
T ss_pred C-------CCHHHHHHHHHHhccCCEEEEeC
Confidence 2 12467889999999999999874
No 314
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.61 E-value=0.47 Score=48.74 Aligned_cols=92 Identities=15% Similarity=0.119 Sum_probs=58.4
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC------CC---CCce
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP------FP---GIVF 454 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP------fp---d~sF 454 (595)
.++.+||-+|+|. |.++..|++. .|++++.++ ...+++++.|....+...+...+. .. ...|
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSP-----RRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCH-----HHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCC
Confidence 3578999999863 5666666652 578888764 345666777766433222101110 11 2459
Q ss_pred eEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 455 DAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 455 DlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+|+-.- .....+..+.++|+|||.+++..
T Consensus 242 D~vid~~-------g~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 242 NVTIDCS-------GNEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SEEEECS-------CCHHHHHHHHHHSCTTCEEEECS
T ss_pred CEEEECC-------CCHHHHHHHHHHHhcCCEEEEEe
Confidence 9998642 12356788899999999999875
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.48 E-value=0.34 Score=50.40 Aligned_cols=93 Identities=17% Similarity=0.092 Sum_probs=60.2
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC------CC-CCCCCCcee
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT------ER-LPFPGIVFD 455 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~------~~-LPfpd~sFD 455 (595)
.++.+||=+|+|. |.++..|++. .|++++.++ ...+++++.|....+..... .. ..+..+.||
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~-----~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQA-----TKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCH-----HHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCC
Confidence 4688999999863 5666666662 577787764 34567777787644322111 11 012234799
Q ss_pred EEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 456 lV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+|+-.- .....+..+.++|+|||.+++...
T Consensus 256 vvid~~-------G~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 256 VVIECA-------GVAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEEECS-------CCHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEECC-------CCHHHHHHHHHHhccCCEEEEEec
Confidence 998642 124678899999999999998753
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.28 E-value=0.33 Score=49.91 Aligned_cols=92 Identities=17% Similarity=0.127 Sum_probs=59.4
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC---CCC-C-CCCCceeEE
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---ERL-P-FPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~---~~L-P-fpd~sFDlV 457 (595)
.++.+||=+|+|. |.++..|++. .|++++.++ ....++++.|....+...+. ..+ . .....||+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~-----~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRK-----HCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCH-----HHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCH-----HHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 3678999999873 6666667663 688888763 34567777786544322111 000 0 122469999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+-.- .....+..+.++|+|||.+++..
T Consensus 240 ~d~~-------g~~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 240 VIAG-------GDVHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EECS-------SCTTHHHHHHHHEEEEEEEEECC
T ss_pred EECC-------CChHHHHHHHHHHhcCCEEEEec
Confidence 8642 11256888999999999999764
No 317
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.93 E-value=0.87 Score=47.18 Aligned_cols=89 Identities=18% Similarity=0.171 Sum_probs=59.5
Q ss_pred CCCEEEEEC-CC-CchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecC-----CCCCCCCCCceeEE
Q 007641 389 RTRVVLDVG-CG-VASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMG-----TERLPFPGIVFDAV 457 (595)
Q Consensus 389 ~~~rVLDIG-CG-tG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d-----~~~LPfpd~sFDlV 457 (595)
++.+||=+| +| .|.++..|++. .|++++.++ ...+++++.|...++...+ ...+ ..+.||+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~-----~~~~~~~~lGad~vi~~~~~~~~~v~~~--~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRP-----ETQEWVKSLGAHHVIDHSKPLAAEVAAL--GLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSH-----HHHHHHHHTTCSEEECTTSCHHHHHHTT--CSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCH-----HHHHHHHHcCCCEEEeCCCCHHHHHHHh--cCCCceEE
Confidence 577899998 54 57777777763 678887763 3456677777654432211 1112 33579998
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+-.- .....+..+.++|+|||.+++..
T Consensus 244 id~~-------g~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 244 FSTT-------HTDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EECS-------CHHHHHHHHHHHSCTTCEEEECS
T ss_pred EECC-------CchhhHHHHHHHhcCCCEEEEEC
Confidence 8632 23467889999999999999874
No 318
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=89.89 E-value=3.7 Score=43.18 Aligned_cols=121 Identities=12% Similarity=0.029 Sum_probs=68.6
Q ss_pred CEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC--------CCCCceeEEEe
Q 007641 391 RVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP--------FPGIVFDAVHC 459 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP--------fpd~sFDlV~~ 459 (595)
.+|||+-||.|.++.-|.++ -|.++|+++...... +.......+...|...+. +....+|+|+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~-----~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTH-----AINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHH-----HHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHH-----HHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 47999999999999888775 457899986533222 222222334445544442 12357999997
Q ss_pred cccCccccc-------CH-HHHHHH---HHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEE
Q 007641 460 ARCRVPWHI-------EG-GKLLLE---LNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 460 ~~c~v~~h~-------d~-~~lL~E---l~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
....-.+.. +. ..++.+ +.+.++|.-+++=-++.+.. ......+..+. .+..+||.+
T Consensus 78 gpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s--~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 78 GPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQ--EKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CCCCCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTC--GGGHHHHHHHH-HHHHTTEEE
T ss_pred cCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhc--cCcHHHHHHHH-HHHcCCCcc
Confidence 652111211 11 234444 44556886333322333222 22334577777 889999987
No 319
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.81 E-value=0.16 Score=52.96 Aligned_cols=89 Identities=16% Similarity=0.103 Sum_probs=56.7
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecC---CCCCCCCCCceeEEEec
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMG---TERLPFPGIVFDAVHCA 460 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d---~~~LPfpd~sFDlV~~~ 460 (595)
.++.+||-+|+|. |.++..|++. .|++++.++.. .+++++.|...++...+ ...+. ..||+|+-.
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~-----~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~ 264 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAK-----REAAKALGADEVVNSRNADEMAAHL---KSFDFILNT 264 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGG-----HHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEEC
Confidence 3588999999873 6666666662 58888887553 34555667654332211 11221 469999864
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-. . ...+..+.++|+|||.+++..
T Consensus 265 ~g-~------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 265 VA-A------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CS-S------CCCHHHHHTTEEEEEEEEECC
T ss_pred CC-C------HHHHHHHHHHhccCCEEEEec
Confidence 31 1 124667889999999998764
No 320
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.28 E-value=0.47 Score=44.28 Aligned_cols=92 Identities=17% Similarity=0.174 Sum_probs=54.2
Q ss_pred CCCCEEEEECC--CCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC---CCC-C-CCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---ERL-P-FPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~---~~L-P-fpd~sFDlV 457 (595)
.++.+||-+|+ |.|..+..++. ..|++++.++. ..+.+++.+....+...+. ..+ . .....+|+|
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~-----~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~v 111 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA-----KREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVV 111 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH-----HHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEE
Confidence 35789999995 34555544444 26888887643 2334444554432211111 000 0 112369999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+..- - ...+..+.++|+|||++++...
T Consensus 112 i~~~---g-----~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 112 LNSL---A-----GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EECC---C-----THHHHHHHHTEEEEEEEEECSC
T ss_pred EECC---c-----hHHHHHHHHHhccCCEEEEEcC
Confidence 8642 1 2568889999999999998743
No 321
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=89.27 E-value=0.75 Score=47.40 Aligned_cols=72 Identities=18% Similarity=0.155 Sum_probs=43.1
Q ss_pred CCCCceeEEEecccCccc------cc----CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcC-C
Q 007641 449 FPGIVFDAVHCARCRVPW------HI----EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMC-W 517 (595)
Q Consensus 449 fpd~sFDlV~~~~c~v~~------h~----d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~G-w 517 (595)
+++++||+|++..++..- +. -...+|.++.|+|+|||.++|.....+....+. .....+..++...| |
T Consensus 54 l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~-~~l~~l~~~i~~~G~~ 132 (319)
T 1eg2_A 54 LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGS-GDLISIISHMRQNSKM 132 (319)
T ss_dssp SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTB-CCHHHHHHHHHHHCCC
T ss_pred CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccccccccc-ccHHHHHHHHhCcccc
Confidence 356789999998754321 11 125778889999999999999865332200000 01123444555567 7
Q ss_pred EEEE
Q 007641 518 ELVS 521 (595)
Q Consensus 518 ~~v~ 521 (595)
..+.
T Consensus 133 ~~~~ 136 (319)
T 1eg2_A 133 LLAN 136 (319)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 7654
No 322
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=89.12 E-value=0.64 Score=48.30 Aligned_cols=92 Identities=11% Similarity=0.017 Sum_probs=60.0
Q ss_pred CCCCEEEEECCC-CchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecC-CCCC-----CCCCCceeE
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMG-TERL-----PFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d-~~~L-----Pfpd~sFDl 456 (595)
.++.+||=+|+| .|.++..|++. .|++++.++. .++++++.|....+...+ ...+ .+..+.||+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~ 266 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK-----KYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDY 266 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTT-----HHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH-----HHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCE
Confidence 367899999986 46666666662 6899988754 445677777665433221 1111 011236999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCC-cEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPG-GFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPG-G~Lvis~ 491 (595)
|+-.- .....+..+.++|+|| |++++..
T Consensus 267 vid~~-------g~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 267 SFECI-------GNVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp EEECS-------CCHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECC-------CCHHHHHHHHHHhhccCCEEEEEc
Confidence 98642 1246788999999997 9999874
No 323
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.06 E-value=0.6 Score=47.70 Aligned_cols=92 Identities=14% Similarity=0.122 Sum_probs=60.3
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC--CCC-CC-CCCceeEEE
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT--ERL-PF-PGIVFDAVH 458 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~--~~L-Pf-pd~sFDlV~ 458 (595)
.++.+||-+|+|. |.++..|++. .|++++.++ ....++++.|....+..... ..+ .. ....||+|+
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~-----~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~ 244 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDD-----DRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVF 244 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCH-----HHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH-----HHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEE
Confidence 3688999999864 6666666652 688888874 45567777787654332110 000 00 123699998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-.- .....+..+.++|+|||.+++..
T Consensus 245 d~~-------G~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 245 DFV-------GAQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp ESS-------CCHHHHHHHHHHEEEEEEEEECS
T ss_pred ECC-------CCHHHHHHHHHHHhcCCEEEEEC
Confidence 642 12357889999999999999874
No 324
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.50 E-value=0.47 Score=49.08 Aligned_cols=90 Identities=18% Similarity=0.045 Sum_probs=57.9
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC------CCCCceeEE
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP------FPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP------fpd~sFDlV 457 (595)
.++.+||-+|+|. |.++..+++. .|++++.++ ...+++++.|....+. .....+. .....||+|
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSR-----EKLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCc-----hhHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEE
Confidence 4688999999763 5566666653 688888764 3456677777754433 2111110 122369999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+-.-. ...+..+.++|+|||.+++..
T Consensus 262 id~~g--------~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 262 LEIAG--------GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEETT--------SSCHHHHHHHEEEEEEEEEEC
T ss_pred EECCC--------hHHHHHHHHHhhcCCEEEEEe
Confidence 86431 134677889999999999874
No 325
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=88.43 E-value=0.72 Score=46.83 Aligned_cols=91 Identities=15% Similarity=0.091 Sum_probs=55.1
Q ss_pred CCCCEEEEECC--CCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC-----CCCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL-----PFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L-----Pfpd~sFDlV 457 (595)
.++.+||-+|| |.|..+..++. ..|++++.++. ..+.+++.+....+-..+...+ ....+.+|+|
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~-----~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE-----KIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEE
Confidence 35789999998 45555555554 26788887643 3344455565433221110111 0011469999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+.+-. ...+..+.++|+|||++++..
T Consensus 219 i~~~g--------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 219 FDNVG--------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EESSC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred EECCC--------hHHHHHHHHHHhcCCEEEEEe
Confidence 87531 135788899999999998764
No 326
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.15 E-value=0.46 Score=48.67 Aligned_cols=90 Identities=20% Similarity=0.217 Sum_probs=56.2
Q ss_pred CCCEEEEECCCC-chhHHHHhh-----CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecC----CCCCCCCCCceeEEE
Q 007641 389 RTRVVLDVGCGV-ASFGGFLFD-----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMG----TERLPFPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGt-G~~a~~La~-----r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d----~~~LPfpd~sFDlV~ 458 (595)
++.+||-+|+|. |.++..|++ ..|++++.++ ...+++++.|....+...+ ...+. ....||+|+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vi 243 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSK-----KHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAI 243 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCH-----HHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCH-----HHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEE
Confidence 478999999963 555555554 2477777763 3445666667654332111 11111 123699998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-.- .....+..+.++|+|||.+++..
T Consensus 244 d~~-------g~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 244 DLV-------GTEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp ESS-------CCHHHHHHHHHHEEEEEEEEECC
T ss_pred ECC-------CChHHHHHHHHHhhcCCEEEEeC
Confidence 643 12357888999999999999864
No 327
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=88.06 E-value=5.2 Score=41.32 Aligned_cols=125 Identities=10% Similarity=0.190 Sum_probs=73.1
Q ss_pred CCEEEEECCCCchhHHHHhhCC-----c-EEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC---CCCCceeEEEec
Q 007641 390 TRVVLDVGCGVASFGGFLFDRG-----V-LTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP---FPGIVFDAVHCA 460 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r~-----V-~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP---fpd~sFDlV~~~ 460 (595)
..+|||+-||.|.+..-|.+.+ | .++|+++......+.++ +.. ....|...+. ++...+|+|+..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~----~~~--~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNF----KEE--VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHH----CCC--CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHC----CCC--cccCChhhcCHHHhccCCCCEEEec
Confidence 4589999999999998887754 4 68999875433222222 211 3344544442 222358999976
Q ss_pred ccCccc---------c-cCH-HHHHHHHHH-hc-----cCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 461 RCRVPW---------H-IEG-GKLLLELNR-VL-----RPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 461 ~c~v~~---------h-~d~-~~lL~El~R-vL-----KPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
..--.+ . .+. ..++.++.| +| +|. +|++-..+-+.. ...+..+...++.+||.+....
T Consensus 84 pPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lENV~gl~~----~~~~~~i~~~l~~~GY~v~~~v 158 (327)
T 3qv2_A 84 PPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIENVPLFKE----SLVFKEIYNILIKNQYYIKDII 158 (327)
T ss_dssp CCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEEECGGGGG----SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEEchhhhcC----hHHHHHHHHHHHhCCCEEEEEE
Confidence 521222 1 122 367777777 55 454 344432221111 1457888888999999876554
Q ss_pred ec
Q 007641 524 KD 525 (595)
Q Consensus 524 ~~ 525 (595)
-.
T Consensus 159 l~ 160 (327)
T 3qv2_A 159 CS 160 (327)
T ss_dssp EC
T ss_pred Ee
Confidence 33
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=87.54 E-value=0.9 Score=46.99 Aligned_cols=92 Identities=10% Similarity=-0.036 Sum_probs=58.5
Q ss_pred CCCCEEEEECCC-CchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-CCC-----CCCCCceeE
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-ERL-----PFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-~~L-----Pfpd~sFDl 456 (595)
.++.+||-+|+| .|.++..|++. .|++++.++. ..+++++.|....+...+. ..+ ....+.||+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dv 264 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKD-----KFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDY 264 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGG-----GHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHH-----HHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCE
Confidence 467899999986 35666666652 5788887754 3456667776543322210 111 011236999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCC-cEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPG-GFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPG-G~Lvis~ 491 (595)
|+-.- .....+..+.++|+|| |.+++..
T Consensus 265 vid~~-------g~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 265 AVECA-------GRIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp EEECS-------CCHHHHHHHHHTBCTTTCEEEECC
T ss_pred EEECC-------CCHHHHHHHHHHHhcCCCEEEEEc
Confidence 98642 1236788899999999 9999875
No 329
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=87.48 E-value=2 Score=44.29 Aligned_cols=124 Identities=10% Similarity=0.120 Sum_probs=68.9
Q ss_pred CCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCC-CCCceeEEEecccCcc
Q 007641 390 TRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPF-PGIVFDAVHCARCRVP 465 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPf-pd~sFDlV~~~~c~v~ 465 (595)
..+|||+.||.|.++..|..+ .|.++|+++......+.++ .... ..|...+.. .-..+|+|+...+.-.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~---~~~~----~~Di~~~~~~~~~~~D~l~~gpPCQ~ 83 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNF---GEKP----EGDITQVNEKTIPDHDILCAGFPCQA 83 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHH---SCCC----BSCGGGSCGGGSCCCSEEEEECCCTT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc---CCCC----cCCHHHcCHhhCCCCCEEEECCCCCC
Confidence 468999999999999888875 4678899875443332222 1111 344433321 0124899997652122
Q ss_pred ccc--------CH-HHHHHH---HHHhccCCcEEEEE-eCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 466 WHI--------EG-GKLLLE---LNRVLRPGGFFIWS-ATPVYQKLPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 466 ~h~--------d~-~~lL~E---l~RvLKPGG~Lvis-~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
+.. +. ..++.+ +.+.++|. +|++- ++.+... ..-..|..+...+..+||.+....
T Consensus 84 fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~-~~~~ENV~gl~~~--~~~~~~~~i~~~l~~~GY~v~~~v 151 (327)
T 2c7p_A 84 FSISGKQKGFEDSRGTLFFDIARIVREKKPK-VVFMENVKNFASH--DNGNTLEVVKNTMNELDYSFHAKV 151 (327)
T ss_dssp TCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS-EEEEEEEGGGGTG--GGGHHHHHHHHHHHHTTBCCEEEE
T ss_pred cchhcccCCCcchhhHHHHHHHHHHHhccCc-EEEEeCcHHHHhc--cccHHHHHHHHHHHhCCCEEEEEE
Confidence 211 21 124333 44456886 33333 2222221 122467888888899998765443
No 330
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=87.40 E-value=5.7 Score=41.53 Aligned_cols=95 Identities=16% Similarity=0.030 Sum_probs=61.2
Q ss_pred CCEEEEECCCCchhHHHHhhCCcEEEeCCchhHHHHHHHHHHHcCCCe--eEeecCCCCCCCCCCceeEEEecccCcccc
Q 007641 390 TRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPA--ISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r~V~giDisp~di~~aqvq~A~ergi~~--~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h 467 (595)
+.+||.|+.+.|.++..|+.+.++.+.=+ ...+.+..+.+...+++. +........+ ...||+|+.. ++-+
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~~~~~~ds-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~---lpk~ 111 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHKPYSIGDS-YISELATRENLRLNGIDESSVKFLDSTADY---PQQPGVVLIK---VPKT 111 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGCCEEEESC-HHHHHHHHHHHHHTTCCGGGSEEEETTSCC---CSSCSEEEEE---CCSC
T ss_pred CCCEEEECCCCCHHHHhhccCCceEEEhH-HHHHHHHHHHHHHcCCCccceEeccccccc---ccCCCEEEEE---cCCC
Confidence 46799999999999999988788777422 222333333344456543 1222212322 3679999874 3333
Q ss_pred c-CHHHHHHHHHHhccCCcEEEEEe
Q 007641 468 I-EGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 468 ~-d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
. .....|..+...|+||+.+++..
T Consensus 112 ~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 112 LALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp HHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 3 23678888999999999998775
No 331
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=87.37 E-value=0.48 Score=48.56 Aligned_cols=93 Identities=12% Similarity=0.005 Sum_probs=56.9
Q ss_pred CCCCEEEEECC--CCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----CCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----FPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----fpd~sFDlV 457 (595)
.++.+||-+|+ |.|..+..++. ..|++++.++.. .+.+++.|....+-..+...+. ...+.||+|
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~-----~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~v 242 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGK-----EELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGV 242 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTH-----HHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHH-----HHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEE
Confidence 35789999998 45666666655 268888876542 3445555654332211111110 011269999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
+..-. ....+..+.++|++||++++...
T Consensus 243 i~~~g-------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 243 INVSV-------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EECSS-------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred EECCC-------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 87531 23678889999999999987643
No 332
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=87.34 E-value=1.4 Score=45.05 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=56.4
Q ss_pred CCCCEEEEECCC-CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----CCCCceeEEE
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----FPGIVFDAVH 458 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----fpd~sFDlV~ 458 (595)
.++.+||-+|+| .|.++..++.. .|++++.++ ...+++++.|....+-..+ ..+. .. +.||+|+
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~~~~d~~~-~~~~~~~~~~~-~~~d~vi 235 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGD-----EKLELAKELGADLVVNPLK-EDAAKFMKEKV-GGVHAAV 235 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH-----HHHHHHHHTTCSEEECTTT-SCHHHHHHHHH-SSEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHCCCCEEecCCC-ccHHHHHHHHh-CCCCEEE
Confidence 357899999986 46666666552 678888764 3445566666543321111 1100 01 3599998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-.- .....+..+.++|++||.+++..
T Consensus 236 d~~-------g~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 236 VTA-------VSKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp ESS-------CCHHHHHHHHHHEEEEEEEEECC
T ss_pred ECC-------CCHHHHHHHHHHhhcCCEEEEec
Confidence 643 12357888999999999998764
No 333
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=87.31 E-value=2.1 Score=43.94 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=57.0
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC---C-cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC---CC----C--CCCCCc
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR---G-VLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---ER----L--PFPGIV 453 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r---~-V~giDisp~di~~aqvq~A~ergi~~~~~v~d~---~~----L--Pfpd~s 453 (595)
.++.+||=+|+|. |.++..|++. . |++++.++. ..+++++.+..++....+. .. + -.....
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g 252 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEG-----RLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIE 252 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHH-----HHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-----HHHHHHHhchhcccccccccchHHHHHHHHHHhCCCC
Confidence 3578899999863 6666666663 3 888888753 4455555532222222110 00 0 012346
Q ss_pred eeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 454 FDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 454 FDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
||+|+-.- .....+..+.++|+|||++++...
T Consensus 253 ~Dvvid~~-------g~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 253 PAVALECT-------GVESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CSEEEECS-------CCHHHHHHHHHHSCTTCEEEECCC
T ss_pred CCEEEECC-------CChHHHHHHHHHhcCCCEEEEEcc
Confidence 99998642 123578889999999999998753
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=87.10 E-value=0.81 Score=47.35 Aligned_cols=92 Identities=10% Similarity=0.026 Sum_probs=57.8
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-CCC-----CCCCCceeE
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-ERL-----PFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-~~L-----Pfpd~sFDl 456 (595)
.++.+||-+|+|. |.++..|++. .|++++.++. ..+++++.|....+...+. ..+ ....+.||+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~-----~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~ 265 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPD-----KFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDF 265 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG-----GHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHH-----HHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCE
Confidence 4678999999863 5666666652 5788887754 3455666776543322210 111 011136999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCC-cEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPG-GFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPG-G~Lvis~ 491 (595)
|+-.- .....+..+.++|+|| |.+++..
T Consensus 266 vid~~-------g~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 266 SLECV-------GNVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp EEECS-------CCHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECC-------CCHHHHHHHHHHhhcCCcEEEEEc
Confidence 98642 1235788899999999 9999864
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=86.89 E-value=1 Score=46.53 Aligned_cols=92 Identities=8% Similarity=-0.051 Sum_probs=57.6
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-CCC-----CCCCCceeE
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-ERL-----PFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-~~L-----Pfpd~sFDl 456 (595)
.++.+||-+|+|. |.++..|++. .|++++.++. ..+++++.|....+...+. ..+ ....+.||+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~-----~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~ 264 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKD-----KFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDF 264 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG-----GHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH-----HHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcE
Confidence 3678999999863 5666666652 5788887754 3355666676543322110 111 011236999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCC-cEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPG-GFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPG-G~Lvis~ 491 (595)
|+-.- .....+..+.++|++| |++++..
T Consensus 265 vid~~-------g~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 265 SFEVI-------GRLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp EEECS-------CCHHHHHHHHHHBCTTTCEEEECS
T ss_pred EEECC-------CCHHHHHHHHHHhhcCCcEEEEec
Confidence 98642 1235788899999999 9999764
No 336
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=86.80 E-value=0.67 Score=47.33 Aligned_cols=91 Identities=24% Similarity=0.220 Sum_probs=56.2
Q ss_pred CCCCEEEEECCC--CchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC------CCCCCceeE
Q 007641 388 KRTRVVLDVGCG--VASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL------PFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCG--tG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L------Pfpd~sFDl 456 (595)
.++.+||-+|+| .|..+..++. ..|++++.++.. .+++++.|....+...+ ..+ -.....||+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~-----~~~~~~lga~~~~~~~~-~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKH-----TEELLRLGAAYVIDTST-APLYETVMELTNGIGADA 216 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTT-----HHHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHhCCCcEEEeCCc-ccHHHHHHHHhCCCCCcE
Confidence 468899999997 5666666666 378888887653 34455566654332211 111 012246999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
|+..-. . ..+..+.++|+|||.+++...
T Consensus 217 vid~~g-------~-~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 217 AIDSIG-------G-PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEESSC-------H-HHHHHHHHTEEEEEEEEECCC
T ss_pred EEECCC-------C-hhHHHHHHHhcCCCEEEEEee
Confidence 986431 1 223445589999999998753
No 337
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.66 E-value=1.2 Score=45.60 Aligned_cols=88 Identities=14% Similarity=0.184 Sum_probs=56.2
Q ss_pred CCCEEEEEC-CC-CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecC-----CCCCCCCCCceeEEE
Q 007641 389 RTRVVLDVG-CG-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMG-----TERLPFPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIG-CG-tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d-----~~~LPfpd~sFDlV~ 458 (595)
++.+||=+| +| .|.++..+++. .|++++.++ ...+++++.|...++...+ ...+ ....||+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~~vi~~~~~~~~~~~~~--~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRN-----ETIEWTKKMGADIVLNHKESLLNQFKTQ--GIELVDYVF 222 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSH-----HHHHHHHHHTCSEEECTTSCHHHHHHHH--TCCCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHhcCCcEEEECCccHHHHHHHh--CCCCccEEE
Confidence 578999994 44 46666666653 678887763 3456666777654332211 0111 224699998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
-.- .....+..+.++|+|||.++..
T Consensus 223 d~~-------g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 223 CTF-------NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ESS-------CHHHHHHHHHHHEEEEEEEEES
T ss_pred ECC-------CchHHHHHHHHHhccCCEEEEE
Confidence 642 2346778899999999999765
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=86.57 E-value=1 Score=46.44 Aligned_cols=92 Identities=11% Similarity=-0.016 Sum_probs=57.5
Q ss_pred CCCCEEEEECCCC-chhHHHHhh---C-CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-CCC-----CCCCCceeE
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFD---R-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-ERL-----PFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~---r-~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-~~L-----Pfpd~sFDl 456 (595)
.++.+||-+|+|. |.++..|++ . .|++++.++. ..+++++.|....+...+. ..+ ....+.||+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~-----~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~ 263 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKD-----KFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDY 263 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGG-----GHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH-----HHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCE
Confidence 4678999999863 556666665 2 5788887754 3345566676543322110 111 011236999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCC-cEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPG-GFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPG-G~Lvis~ 491 (595)
|+-.- .....+..+.++|+|| |.+++..
T Consensus 264 vid~~-------g~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 264 SFECI-------GNVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp EEECS-------CCHHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECC-------CcHHHHHHHHHhhccCCcEEEEEe
Confidence 98642 1235788899999999 9999864
No 339
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=86.42 E-value=0.51 Score=47.63 Aligned_cols=85 Identities=22% Similarity=0.224 Sum_probs=54.1
Q ss_pred CCCCEEEEECCC-CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccC
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
.++.+||=+|+| .|.++..|++. .|++++ ++. ..+++++.|...++ . +...+ ...||+|+-.-
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~-----~~~~~~~lGa~~v~-~-d~~~v---~~g~Dvv~d~~-- 207 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASL-----SQALAAKRGVRHLY-R-EPSQV---TQKYFAIFDAV-- 207 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSC-----CHHHHHHHTEEEEE-S-SGGGC---CSCEEEEECC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-Chh-----hHHHHHHcCCCEEE-c-CHHHh---CCCccEEEECC--
Confidence 468899999995 46666666663 788888 654 34556666764443 1 23333 46799998532
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
- ...+..+.++|+|||++++..
T Consensus 208 -g-----~~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 208 -N-----SQNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ------------TTGGGEEEEEEEEEEC
T ss_pred -C-----chhHHHHHHHhcCCCEEEEEe
Confidence 1 122356789999999999874
No 340
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.36 E-value=0.71 Score=47.30 Aligned_cols=92 Identities=16% Similarity=0.181 Sum_probs=55.6
Q ss_pred CCCCEEEEECCC--CchhHHHHhh----CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC---C-CCCC-CceeE
Q 007641 388 KRTRVVLDVGCG--VASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---L-PFPG-IVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCG--tG~~a~~La~----r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~---L-Pfpd-~sFDl 456 (595)
.++.+||-+|+| .|..+..++. ..|++++.++. ..+.+++.|....+...+... + .... +.||+
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 243 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE-----AVEAAKRAGADYVINASMQDPLAEIRRITESKGVDA 243 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH-----HHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHH-----HHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceE
Confidence 357899999998 4455544443 25778887643 334455556543332221110 0 0111 47999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+..-. ....+..+.++|+|||.+++..
T Consensus 244 vi~~~g-------~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 244 VIDLNN-------SEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEESCC-------CHHHHTTGGGGEEEEEEEEECC
T ss_pred EEECCC-------CHHHHHHHHHHHhcCCEEEEEC
Confidence 986531 2357788899999999998864
No 341
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=86.30 E-value=0.81 Score=46.50 Aligned_cols=89 Identities=16% Similarity=0.113 Sum_probs=57.1
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHH-HHcCCCeeEeecCC------CCCCCCCCcee
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFA-LERGIPAISAVMGT------ERLPFPGIVFD 455 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A-~ergi~~~~~v~d~------~~LPfpd~sFD 455 (595)
.++.+||-+|+ |.|..+..++.. .|++++.++. ..+.+ ++.|....+...+. ..+. .+.||
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAE-----KCRFLVEELGFDGAIDYKNEDLAAGLKREC--PKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTTCCSEEEETTTSCHHHHHHHHC--TTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHcCCCEEEECCCHHHHHHHHHhc--CCCce
Confidence 46889999998 456666666653 6888887643 34455 55665443322111 0111 24699
Q ss_pred EEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 456 AVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 456 lV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+|+..-. ...+..+.++|+|||++++..
T Consensus 221 ~vi~~~g--------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 221 VFFDNVG--------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEESSC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCC--------cchHHHHHHHHhhCCEEEEEe
Confidence 9987431 247888999999999999864
No 342
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=86.26 E-value=1.2 Score=45.38 Aligned_cols=91 Identities=15% Similarity=0.023 Sum_probs=56.0
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHH-HcCCCeeEeecCCCCCC-----CCCCceeE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFAL-ERGIPAISAVMGTERLP-----FPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~-ergi~~~~~v~d~~~LP-----fpd~sFDl 456 (595)
.++.+||-+|+ |.|..+..++.. .|++++.++. ..+.++ +.|....+-..+...+. ...+.||+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~-----~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKE-----KVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcE
Confidence 36789999997 466666666652 6788887643 344555 45654332211111110 01246999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+..-. ...+..+.++|+|||.+++..
T Consensus 229 vi~~~g--------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 229 YFENVG--------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEESSC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 987531 147888999999999998864
No 343
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=86.04 E-value=0.84 Score=47.54 Aligned_cols=92 Identities=23% Similarity=0.286 Sum_probs=57.8
Q ss_pred CCCCEEEEECCC-CchhHHHHhh----CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeec---C---CCCC-C-CCCCce
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVM---G---TERL-P-FPGIVF 454 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~----r~V~giDisp~di~~aqvq~A~ergi~~~~~v~---d---~~~L-P-fpd~sF 454 (595)
.++.+||-+|+| .|.++..|++ ..|++++.++ ...+++++.|...++... + ...+ . .....|
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~-----~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSP-----NRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCH-----HHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCH-----HHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCC
Confidence 357899999976 4566666665 2688888774 345666777765433221 1 0001 0 122369
Q ss_pred eEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 455 DAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 455 DlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+|+-.-. ....+..+.++|+|||.+++..
T Consensus 269 Dvvid~~g-------~~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 269 DFILEATG-------DSRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp EEEEECSS-------CTTHHHHHHHHEEEEEEEEECC
T ss_pred cEEEECCC-------CHHHHHHHHHHHhcCCEEEEEe
Confidence 99986421 1246788899999999999864
No 344
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=85.81 E-value=1.7 Score=44.39 Aligned_cols=90 Identities=17% Similarity=0.103 Sum_probs=56.7
Q ss_pred CCCEEEEECCC-CchhHHHHhh---C-CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC-----C-CCCCceeEE
Q 007641 389 RTRVVLDVGCG-VASFGGFLFD---R-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL-----P-FPGIVFDAV 457 (595)
Q Consensus 389 ~~~rVLDIGCG-tG~~a~~La~---r-~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L-----P-fpd~sFDlV 457 (595)
++.+||-+|+| .|.++..+++ . .|++++.++ ...+++++.|....+...+ ..+ . .....||+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~-----~~~~~~~~~Ga~~~~~~~~-~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSD-----FRRELAKKVGADYVINPFE-EDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH-----HHHHHHHHHTCSEEECTTT-SCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHhCCCEEECCCC-cCHHHHHHHHcCCCCCCEE
Confidence 57899999995 3555556655 3 688888774 3445666667543322111 110 0 112359999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+..-. ....+..+.++|++||++++..
T Consensus 241 id~~g-------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 241 LEFSG-------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EECSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EECCC-------CHHHHHHHHHHHhcCCEEEEEc
Confidence 86431 2367888999999999998764
No 345
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.80 E-value=1 Score=46.60 Aligned_cols=93 Identities=10% Similarity=-0.045 Sum_probs=58.4
Q ss_pred CCCCEEEEECCC-CchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-CCC-----CCCCCceeE
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-ERL-----PFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-~~L-----Pfpd~sFDl 456 (595)
.++.+||-+|+| .|.++..|++. .|++++.++. +.+++++.|....+...+. ..+ ....+.||+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~-----~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dv 268 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGE-----KFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDY 268 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG-----GHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH-----HHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccE
Confidence 467899999986 35666666662 5788887754 3455667776543322110 000 011136999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCC-cEEEEEeC
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPG-GFFIWSAT 492 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPG-G~Lvis~p 492 (595)
|+-.- .....+..+.++|++| |.+++...
T Consensus 269 vid~~-------G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 269 SLDCA-------GTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp EEESS-------CCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred EEECC-------CCHHHHHHHHHHhhcCCCEEEEECC
Confidence 98642 1236788899999999 99997653
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=85.22 E-value=1.1 Score=45.66 Aligned_cols=91 Identities=13% Similarity=0.038 Sum_probs=56.4
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC---CCC-C-CCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---ERL-P-FPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~---~~L-P-fpd~sFDlV 457 (595)
.++.+||-+|+ |.|..+..++.. .|++++.++. ..+.+++.|....+-..+. ..+ . .....||+|
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~-----~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~v 239 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSED-----KLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKV 239 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 35789999998 577777777663 6788887643 3344455565433211110 000 0 112469999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+..-. ...+..+.++|++||.|++..
T Consensus 240 i~~~g--------~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 240 VDHTG--------ALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EESSC--------SSSHHHHHHHEEEEEEEEESS
T ss_pred EECCC--------HHHHHHHHHhhccCCEEEEEe
Confidence 87531 135678889999999998764
No 347
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=85.07 E-value=1.3 Score=46.74 Aligned_cols=102 Identities=23% Similarity=0.130 Sum_probs=63.4
Q ss_pred HHHHHHhcccccCCCCCCEEEEECCCCchhHHHHh-hCCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCC
Q 007641 374 IDFIQESVPDVAWGKRTRVVLDVGCGVASFGGFLF-DRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGI 452 (595)
Q Consensus 374 id~L~~~L~~l~~~~~~~rVLDIGCGtG~~a~~La-~r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~ 452 (595)
...|.+.+.. .+.+||.++-+.|.++..|. ...++.+.-+- .+... ....|+...... . +..+..
T Consensus 35 ~~~l~~~~~~-----~~~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~----~~~~~-l~~~~~~~~~~~--~--~~~~~~ 100 (381)
T 3dmg_A 35 HDLLQKTVEP-----FGERALDLNPGVGWGSLPLEGRMAVERLETSR----AAFRC-LTASGLQARLAL--P--WEAAAG 100 (381)
T ss_dssp HHHHHTTCCC-----CSSEEEESSCTTSTTTGGGBTTBEEEEEECBH----HHHHH-HHHTTCCCEECC--G--GGSCTT
T ss_pred HHHHHHHHHH-----hCCcEEEecCCCCccccccCCCCceEEEeCcH----HHHHH-HHHcCCCccccC--C--ccCCcC
Confidence 4456666554 24689999999998777776 34666664332 12211 334566653211 1 112346
Q ss_pred ceeEEEecccCccccc---CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 453 VFDAVHCARCRVPWHI---EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 453 sFDlV~~~~c~v~~h~---d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.||+|+.. ++-+. .....|..+.++|+|||.+++...
T Consensus 101 ~~d~v~~~---~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 101 AYDLVVLA---LPAGRGTAYVQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp CEEEEEEE---CCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEE---CCcchhHHHHHHHHHHHHHhCCCCCEEEEEEc
Confidence 79999864 33222 236888899999999999998863
No 348
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.00 E-value=1.7 Score=44.14 Aligned_cols=92 Identities=10% Similarity=-0.023 Sum_probs=58.7
Q ss_pred CCCCEEEEECCCC-chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC------CCCCCCCceeE
Q 007641 388 KRTRVVLDVGCGV-ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE------RLPFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCGt-G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~------~LPfpd~sFDl 456 (595)
.++.+||=+|+|. |.++..+++. .+++++.++ ....++++.|....+...+.. .+ .....+|+
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~-----~k~~~a~~lGa~~~i~~~~~~~~~~~~~~-~~~~g~d~ 232 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISS-----EKLALAKSFGAMQTFNSSEMSAPQMQSVL-RELRFNQL 232 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHTTCSEEEETTTSCHHHHHHHH-GGGCSSEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechH-----HHHHHHHHcCCeEEEeCCCCCHHHHHHhh-cccCCccc
Confidence 4688999999873 4555555553 357888874 355677888876544332210 01 11245788
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
|+..- .....+..+.++|+|||.+++...
T Consensus 233 v~d~~-------G~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 233 ILETA-------GVPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp EEECS-------CSHHHHHHHHHHCCTTCEEEECCC
T ss_pred ccccc-------cccchhhhhhheecCCeEEEEEec
Confidence 77532 224678888999999999998753
No 349
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=84.99 E-value=0.25 Score=51.10 Aligned_cols=91 Identities=16% Similarity=0.200 Sum_probs=55.9
Q ss_pred CCCCEEEEECCC-CchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC----CCCCCCCCceeEEEe
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT----ERLPFPGIVFDAVHC 459 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~----~~LPfpd~sFDlV~~ 459 (595)
.++.+||-+|+| .|.++..+++ ..|++++.++.. .+++++.|...++...+. ..+. +.||+|+.
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~-----~~~~~~lGa~~v~~~~~~~~~~~~~~---~~~D~vid 249 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRK-----REDAMKMGADHYIATLEEGDWGEKYF---DTFDLIVV 249 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTT-----HHHHHHHTCSEEEEGGGTSCHHHHSC---SCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHH-----HHHHHHcCCCEEEcCcCchHHHHHhh---cCCCEEEE
Confidence 357899999985 3556666665 268888887653 345556675543322111 1121 46999986
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.-... ....+..+.++|+|||.+++..
T Consensus 250 ~~g~~-----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 250 CASSL-----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CCSCS-----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CCCCC-----cHHHHHHHHHHhcCCCEEEEec
Confidence 43110 0123456788999999998764
No 350
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=84.97 E-value=1.1 Score=46.12 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=56.5
Q ss_pred CEEEEECCC-CchhH-HHHh-hC---C-cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC---C-CCCCCceeEEEe
Q 007641 391 RVVLDVGCG-VASFG-GFLF-DR---G-VLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---L-PFPGIVFDAVHC 459 (595)
Q Consensus 391 ~rVLDIGCG-tG~~a-~~La-~r---~-V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~---L-Pfpd~sFDlV~~ 459 (595)
.+||-+|+| .|.++ ..|+ +. . |++++.++.. ....+++++.|...+ ...... + .+ .+.||+|+-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~--~~~~~~~~~lGa~~v--~~~~~~~~~i~~~-~gg~Dvvid 248 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRP--DPTIDIIEELDATYV--DSRQTPVEDVPDV-YEQMDFIYE 248 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSS--CHHHHHHHHTTCEEE--ETTTSCGGGHHHH-SCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCccc--HHHHHHHHHcCCccc--CCCccCHHHHHHh-CCCCCEEEE
Confidence 899999985 46677 7777 53 5 8899887530 002355666675433 211111 1 01 136999986
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.- .....+..+.++|+|||.+++...
T Consensus 249 ~~-------g~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 249 AT-------GFPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp CS-------CCHHHHHHHHHHEEEEEEEEECCC
T ss_pred CC-------CChHHHHHHHHHHhcCCEEEEEeC
Confidence 42 123568889999999999998753
No 351
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=84.88 E-value=1.6 Score=44.01 Aligned_cols=87 Identities=18% Similarity=0.162 Sum_probs=57.3
Q ss_pred EEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC-CCCCCCceeEEEecccCcc
Q 007641 392 VVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER-LPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 392 rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~-LPfpd~sFDlV~~~~c~v~ 465 (595)
+||=+|+ |.|.++..|++. .|++++.++. ..+++++.|...++...+... ..+..+.||+|+-.-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~---- 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRES-----THGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTV---- 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG-----GHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESS----
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECC----
Confidence 3999997 467777777763 7899988754 345566677665443322111 112235699887532
Q ss_pred cccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 466 WHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 466 ~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
....+..+.++|+|||.+++..
T Consensus 220 ----g~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 220 ----GDKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp ----CHHHHHHHHHTEEEEEEEEECC
T ss_pred ----CcHHHHHHHHHHhcCCEEEEEe
Confidence 1238889999999999999874
No 352
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=84.76 E-value=5.8 Score=39.77 Aligned_cols=62 Identities=15% Similarity=0.051 Sum_probs=38.9
Q ss_pred CCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCE
Q 007641 450 PGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWE 518 (595)
Q Consensus 450 pd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~ 518 (595)
+...||+|+.-. .+......+|..+...|+|||++++..- .+...+ ....++.+++...+.+
T Consensus 179 ~~~~~dlv~ID~---D~Y~~t~~~le~~~p~l~~GGvIv~DD~-~~~~w~---G~~~A~~ef~~~~~~~ 240 (257)
T 3tos_A 179 PQTVIALAYFDL---DLYEPTKAVLEAIRPYLTKGSIVAFDEL-DNPKWP---GENIAMRKVLGLDHAP 240 (257)
T ss_dssp TTCCEEEEEECC---CCHHHHHHHHHHHGGGEEEEEEEEESST-TCTTCT---HHHHHHHHHTCTTSSC
T ss_pred CCCceEEEEEcC---cccchHHHHHHHHHHHhCCCcEEEEcCC-CCCCCh---HHHHHHHHHHhhCCCe
Confidence 456799999864 1222346788899999999999998652 111222 2334555555555544
No 353
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=84.01 E-value=1.7 Score=44.68 Aligned_cols=91 Identities=16% Similarity=0.081 Sum_probs=55.4
Q ss_pred CCCCEEEEECC--CCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC---CC--CCCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE---RL--PFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~---~L--Pfpd~sFDlV 457 (595)
.++.+||-+|+ |.|..+..++. ..|++++.++. ....+++.|....+-..+.. .+ -.....+|+|
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~v 243 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE-----GQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDII 243 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEE
Confidence 35789999997 45556555555 26788887643 33455666654332211100 00 0112369999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+..- ....+..+.++|+|||++++..
T Consensus 244 i~~~--------G~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 244 IEML--------ANVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EESC--------HHHHHHHHHHHEEEEEEEEECC
T ss_pred EECC--------ChHHHHHHHHhccCCCEEEEEe
Confidence 8743 1245778899999999999864
No 354
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=83.86 E-value=1.1 Score=47.15 Aligned_cols=52 Identities=12% Similarity=0.026 Sum_probs=36.7
Q ss_pred HHHHHHHHhcccccC-C-CCCCEEEEECCCCchhHHHHhhC----CcEEEeCCchhHH
Q 007641 372 HYIDFIQESVPDVAW-G-KRTRVVLDVGCGVASFGGFLFDR----GVLTMSFAPKDEH 423 (595)
Q Consensus 372 ~yid~L~~~L~~l~~-~-~~~~rVLDIGCGtG~~a~~La~r----~V~giDisp~di~ 423 (595)
..++.|.+.+..... . .++..|||||.|.|.++..|+.+ .|+++++++..+.
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~ 96 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYK 96 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHH
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHH
Confidence 445556665542110 0 03579999999999999999963 7999999987543
No 355
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=83.75 E-value=1.3 Score=45.06 Aligned_cols=90 Identities=18% Similarity=0.126 Sum_probs=57.0
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC------CCCCceeE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP------FPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP------fpd~sFDl 456 (595)
.++.+||-+|+ |.|..+..+++. .|++++.++ .+.+++++.|....+...+ ..+. .....||+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~-----~~~~~~~~~ga~~~~~~~~-~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD-----EKLKIAKEYGAEYLINASK-EDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHTTCSEEEETTT-SCHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHcCCcEEEeCCC-chHHHHHHHHhCCCCceE
Confidence 46889999995 355666666653 688888763 3445666777554332221 1110 11246999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+..-. ...+..+.++|+|||.+++..
T Consensus 221 vid~~g--------~~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 221 SFDSVG--------KDTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEECCG--------GGGHHHHHHHEEEEEEEEECC
T ss_pred EEECCC--------hHHHHHHHHHhccCCEEEEEc
Confidence 987431 146778889999999999874
No 356
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=83.29 E-value=3.2 Score=43.02 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=57.2
Q ss_pred CCCEEEEECCCCchhHHHHhh--CCcEEEeCCchhHHHHHHHHHHHc----------------------CCCeeEeecCC
Q 007641 389 RTRVVLDVGCGVASFGGFLFD--RGVLTMSFAPKDEHEAQVQFALER----------------------GIPAISAVMGT 444 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~--r~V~giDisp~di~~aqvq~A~er----------------------gi~~~~~v~d~ 444 (595)
+...|+.+|||.......|.. .++..++++-.++-....+...+. ......+-.|.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 467899999999999988876 356666665444433333333322 11233444444
Q ss_pred CCCC--------C-CCCceeEEEecccCccccc--CHHHHHHHHHHhccCCcEEEEE
Q 007641 445 ERLP--------F-PGIVFDAVHCARCRVPWHI--EGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 445 ~~LP--------f-pd~sFDlV~~~~c~v~~h~--d~~~lL~El~RvLKPGG~Lvis 490 (595)
..+. . ......++++- |++.+.. ....+|..+...+ |+|.|++.
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaE-gvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~ 231 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISE-CLLCYMHNNESQLLINTIMSKF-SHGLWISY 231 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEE-SCGGGSCHHHHHHHHHHHHHHC-SSEEEEEE
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEc-chhhCCCHHHHHHHHHHHHhhC-CCcEEEEE
Confidence 3321 1 22345666664 4444332 2257777777776 78887654
No 357
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.58 E-value=3 Score=42.31 Aligned_cols=92 Identities=12% Similarity=0.092 Sum_probs=57.6
Q ss_pred CCCCEEEEECCCCc-hhHHHHhh----CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC------CCCCCCCCceeE
Q 007641 388 KRTRVVLDVGCGVA-SFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT------ERLPFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCGtG-~~a~~La~----r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~------~~LPfpd~sFDl 456 (595)
.++.+||=+|+|.+ .++..++. ..|++++.++ ....++++.|....+...+. ..+ .....+|+
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~-----~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~-t~g~g~d~ 235 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQ-----DKLNLAKKIGADVTINSGDVNPVDEIKKI-TGGLGVQS 235 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCH-----HHHHHHHHTTCSEEEEC-CCCHHHHHHHH-TTSSCEEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcH-----HHhhhhhhcCCeEEEeCCCCCHHHHhhhh-cCCCCceE
Confidence 46889999999854 44444444 2688988874 34567777787654433221 111 12234666
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
++..- -....+....++|++||.+++...
T Consensus 236 ~~~~~-------~~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 236 AIVCA-------VARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EEECC-------SCHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEec-------cCcchhheeheeecCCceEEEEec
Confidence 65421 134678889999999999988753
No 358
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=82.16 E-value=0.44 Score=49.21 Aligned_cols=88 Identities=20% Similarity=0.085 Sum_probs=53.0
Q ss_pred CCCEEEEECCC-CchhHHHHhh---CCcEEEeCCchhHHHHHHHHHH-HcCCCeeEeecCC---CCCCCCCCceeEEEec
Q 007641 389 RTRVVLDVGCG-VASFGGFLFD---RGVLTMSFAPKDEHEAQVQFAL-ERGIPAISAVMGT---ERLPFPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCG-tG~~a~~La~---r~V~giDisp~di~~aqvq~A~-ergi~~~~~v~d~---~~LPfpd~sFDlV~~~ 460 (595)
++.+||=+|+| .|.++..|++ ..|++++.++. ..+.++ +.|...++...+. ..+. +.||+|+-.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~-----~~~~~~~~lGa~~vi~~~~~~~~~~~~---~g~D~vid~ 251 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNK-----KREEALQDLGADDYVIGSDQAKMSELA---DSLDYVIDT 251 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTT-----HHHHHHTTSCCSCEEETTCHHHHHHST---TTEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChH-----HHHHHHHHcCCceeeccccHHHHHHhc---CCCCEEEEC
Confidence 57899999976 3555555555 26888887753 334454 5565433322211 1121 359999864
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-. .. ..+..+.++|+|||.+++..
T Consensus 252 ~g-~~------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 252 VP-VH------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp CC-SC------CCSHHHHTTEEEEEEEEECS
T ss_pred CC-Ch------HHHHHHHHHhccCCEEEEeC
Confidence 21 11 23456778999999999864
No 359
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=82.07 E-value=12 Score=37.64 Aligned_cols=126 Identities=10% Similarity=0.055 Sum_probs=71.8
Q ss_pred CEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCC-CCceeEEEecccCccc
Q 007641 391 RVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFP-GIVFDAVHCARCRVPW 466 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfp-d~sFDlV~~~~c~v~~ 466 (595)
.+|||+=||.|.+..-|.+. -|.++|+++......+ .. .+..+...|...+... -..+|+|+...+--.+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~----~N--~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYE----SN--HSAKLIKGDISKISSDEFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHH----HH--CCSEEEESCGGGCCGGGSCCCSEEECCCCGGGT
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHH----HH--CCCCcccCChhhCCHhhCCcccEEEecCCCCCc
Confidence 37999999999998888775 4578899876443322 22 2334555565444311 1258999976511111
Q ss_pred cc--------CH-HHHHHHHH---HhccCCcEEEEEe-CCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeec
Q 007641 467 HI--------EG-GKLLLELN---RVLRPGGFFIWSA-TPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKD 525 (595)
Q Consensus 467 h~--------d~-~~lL~El~---RvLKPGG~Lvis~-pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~ 525 (595)
.. +. ..++.++. +.+||. +|++-. +.+... ..-..+..+...+..+||.+....-.
T Consensus 75 S~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~ENV~gl~~~--~~~~~~~~i~~~l~~~GY~v~~~vln 143 (331)
T 3ubt_Y 75 SEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAENVKGMMAQ--RHNKAVQEFIQEFDNAGYDVHIILLN 143 (331)
T ss_dssp EETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEECCGGGGC--TTSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeeeecccccc--cccchhhhhhhhhccCCcEEEEEecc
Confidence 11 22 24555444 446896 444432 222211 12245777888888999887554433
No 360
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=82.04 E-value=1.6 Score=44.18 Aligned_cols=91 Identities=15% Similarity=0.091 Sum_probs=57.3
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC---CC--CCCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE---RL--PFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~---~L--Pfpd~sFDlV 457 (595)
.++.+||-+|+ |.|..+..+++. .|++++.++. ..+++++.|....+...+.. .+ -.....||+|
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvv 213 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPE-----KAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVV 213 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHH-----HHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEE
Confidence 46889999993 356666666653 7888887643 44566666755433222110 00 0123469999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+..-. ...+..+.++|+|||++++..
T Consensus 214 id~~g--------~~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 214 YDGVG--------QDTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EESSC--------GGGHHHHHTTEEEEEEEEECC
T ss_pred EECCC--------hHHHHHHHHHhcCCCEEEEEe
Confidence 87431 145778899999999999875
No 361
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=81.14 E-value=1.1 Score=45.39 Aligned_cols=87 Identities=21% Similarity=0.178 Sum_probs=53.7
Q ss_pred EEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC--CC-CCCCCCceeEEEecccC
Q 007641 392 VVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT--ER-LPFPGIVFDAVHCARCR 463 (595)
Q Consensus 392 rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~--~~-LPfpd~sFDlV~~~~c~ 463 (595)
+||-+|+ |.|.++..+++. .|++++.++.. .+++++.|....+...+. .. .......||+|+-.-.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~-----~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g- 225 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-----HDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVG- 225 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-----HHHHHHTTCSEEEECC---------CCSCCEEEEEECST-
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCc-
Confidence 7999997 466777777663 78888887542 345556665543322111 00 1122346999986421
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
. ..+..+.++|++||++++..
T Consensus 226 -----~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 226 -----G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp -----T--TTHHHHHHTEEEEEEEEECS
T ss_pred -----H--HHHHHHHHhhccCCEEEEEe
Confidence 1 24778889999999999864
No 362
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.69 E-value=3.8 Score=42.92 Aligned_cols=93 Identities=12% Similarity=0.033 Sum_probs=54.7
Q ss_pred CCCCEEEEECCC-CchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC------CCCCCCCCceeE
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT------ERLPFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~------~~LPfpd~sFDl 456 (595)
.++.+||=+|+| .|.++..|++. .|++++.++ ....++++.|...++...+. ..+ .....||+
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~-----~~~~~~~~lGa~~vi~~~~~~~~~~i~~~-t~g~g~D~ 285 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSE-----VRRNLAKELGADHVIDPTKENFVEAVLDY-TNGLGAKL 285 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCH-----HHHHHHHHHTCSEEECTTTSCHHHHHHHH-TTTCCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHcCCCEEEcCCCCCHHHHHHHH-hCCCCCCE
Confidence 468899999986 35566666652 578887764 34566777776543322110 011 12236999
Q ss_pred EEecccCcccccCHHHHHHHHHHhc----cCCcEEEEEeC
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVL----RPGGFFIWSAT 492 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvL----KPGG~Lvis~p 492 (595)
|+-.- - .....+..+.++| ++||.+++...
T Consensus 286 vid~~---g---~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 286 FLEAT---G---VPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp EEECS---S---CHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred EEECC---C---CcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 98632 1 1223444444444 99999998753
No 363
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=80.59 E-value=0.87 Score=45.59 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=55.0
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecC----CCCCCCCCCceeEEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMG----TERLPFPGIVFDAVH 458 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d----~~~LPfpd~sFDlV~ 458 (595)
.++.+||-+|+ |.|.++..++.. .|++++.++.. .+++++.|....+...+ ...+ ..||+|+
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~-----~~~~~~~ga~~~~~~~~~~~~~~~~----~~~d~vi 194 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK-----LALPLALGAEEAATYAEVPERAKAW----GGLDLVL 194 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGG-----SHHHHHTTCSEEEEGGGHHHHHHHT----TSEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHhcCCCEEEECCcchhHHHHh----cCceEEE
Confidence 35889999998 456666666652 68888887543 33455566543332211 0112 4699998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
. -.. ..+..+.++|+|||++++..
T Consensus 195 d-~g~--------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 195 E-VRG--------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp E-CSC--------TTHHHHHTTEEEEEEEEEC-
T ss_pred E-CCH--------HHHHHHHHhhccCCEEEEEe
Confidence 7 421 35678899999999998764
No 364
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=79.61 E-value=16 Score=37.65 Aligned_cols=126 Identities=10% Similarity=0.099 Sum_probs=69.4
Q ss_pred CEEEEECCCCchhHHHHhhCC-----cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC---CCCCceeEEEeccc
Q 007641 391 RVVLDVGCGVASFGGFLFDRG-----VLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP---FPGIVFDAVHCARC 462 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r~-----V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP---fpd~sFDlV~~~~c 462 (595)
.+|||+-||.|.+..-|.+++ |.++|+++..... +....+ ...+...|...+. ++...+|+|+...+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~t----y~~N~~-~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSV----YKHNFP-ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHH----HHHHCT-TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHH----HHHhCC-CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 479999999999888887643 6788998653222 222221 2223344444442 22235899997652
Q ss_pred Cccccc--------CH-HHHHHHHHHhc---c-CCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEeecc
Q 007641 463 RVPWHI--------EG-GKLLLELNRVL---R-PGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISKDT 526 (595)
Q Consensus 463 ~v~~h~--------d~-~~lL~El~RvL---K-PGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~~~ 526 (595)
--.+.. +. ..++.++.|+| + |- +|++-..+-+.. ...+..+...++.+||.+....-..
T Consensus 79 CQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~-~~vlENV~gl~~----~~~~~~i~~~l~~~GY~v~~~vl~a 150 (333)
T 4h0n_A 79 CQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVD-YILMENVKGFEN----STVRNLFIDKLKECNFIYQEFLLCP 150 (333)
T ss_dssp CCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCC-EEEEEECTTGGG----SHHHHHHHHHHHHTTEEEEEEEECT
T ss_pred CcchhhhhhccCCcCcccccHHHHHHHHHHhcCCC-EEEEecchhhhh----hhHHHHHHHHHHhCCCeEEEEEecH
Confidence 111111 11 23555555554 4 64 333332221111 1347788888999999876554443
No 365
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=79.58 E-value=1.5 Score=44.25 Aligned_cols=87 Identities=15% Similarity=0.137 Sum_probs=54.6
Q ss_pred EEEEECC--CCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC--CC-CCCCCCceeEEEecccC
Q 007641 392 VVLDVGC--GVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT--ER-LPFPGIVFDAVHCARCR 463 (595)
Q Consensus 392 rVLDIGC--GtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~--~~-LPfpd~sFDlV~~~~c~ 463 (595)
+||-+|+ |.|.++..+++ ..|++++.++.- .+++++.|....+...+. .. ..+....||+|+-.-
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~-----~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~-- 225 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREA-----ADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPV-- 225 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSST-----HHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESC--
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECC--
Confidence 7999997 36666666665 378888887542 344555665543322111 11 112234699998642
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
- . ..+..+.++|+|||++++..
T Consensus 226 -g---~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 226 -G---G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp -C---T--HHHHHHHTTEEEEEEEEECC
T ss_pred -c---H--HHHHHHHHhhcCCCEEEEEe
Confidence 1 1 36888999999999999864
No 366
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=79.27 E-value=2.1 Score=43.27 Aligned_cols=91 Identities=15% Similarity=0.047 Sum_probs=54.6
Q ss_pred CCCCEEEEECC--CCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC---CCC--CCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE---RLP--FPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~---~LP--fpd~sFDlV 457 (595)
.++.+||-+|+ |.|..+..++. ..|++++.++. ....+++.+....+...+.. .+. .....+|+|
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQ-----KAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHH-----HHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEE
Confidence 35789999994 45555555554 26888887643 33444455554332211110 000 112369999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+..-. ...+..+.++|++||++++..
T Consensus 214 i~~~g--------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 214 YDSVG--------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EECSC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred EECCc--------hHHHHHHHHHhcCCCEEEEEe
Confidence 87531 246788899999999998864
No 367
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=79.19 E-value=1.5 Score=44.84 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=56.0
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC--CCC-C-CCCCceeEEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT--ERL-P-FPGIVFDAVH 458 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~--~~L-P-fpd~sFDlV~ 458 (595)
.++.+||-+|+ |.|.++..+++. .|++++.++.. .+++++.|...++..... ..+ . .....||+|+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~-----~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvi 232 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAA-----TEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVV 232 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGG-----HHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEE
Confidence 46889999997 356666666663 68888887543 345555665543322110 000 0 1223699998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-.-. ...+..+.++|+|||.+++..
T Consensus 233 d~~g--------~~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 233 DPIG--------GPAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ESCC----------CHHHHHHTEEEEEEEEEC-
T ss_pred ECCc--------hhHHHHHHHhhcCCCEEEEEE
Confidence 6431 125778889999999999763
No 368
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=78.23 E-value=3.3 Score=41.70 Aligned_cols=90 Identities=20% Similarity=0.134 Sum_probs=54.5
Q ss_pred CCCCEEEEEC-CC-CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEeccc
Q 007641 388 KRTRVVLDVG-CG-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARC 462 (595)
Q Consensus 388 ~~~~rVLDIG-CG-tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c 462 (595)
.++.+||=+| +| .|.++..+++. .|++++ ++ ...+++++.|....+...+...+.-.-..||+|+-.-
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~-----~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~- 223 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SK-----RNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLV- 223 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CH-----HHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESS-
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-cc-----chHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECC-
Confidence 4688999987 54 57777777663 566664 32 2256677778764332221110110114699998642
Q ss_pred CcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 463 RVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 463 ~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.. ..+..+.++|+|||.+++..
T Consensus 224 ------g~-~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 224 ------GG-DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp ------CH-HHHHHHGGGEEEEEEEEECC
T ss_pred ------Cc-HHHHHHHHhccCCCEEEEeC
Confidence 12 33478899999999999864
No 369
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=78.03 E-value=3.9 Score=42.08 Aligned_cols=92 Identities=16% Similarity=0.032 Sum_probs=58.1
Q ss_pred CCCCEEEEEC--CCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC---CCCC-CCCCceeEEE
Q 007641 388 KRTRVVLDVG--CGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---ERLP-FPGIVFDAVH 458 (595)
Q Consensus 388 ~~~~rVLDIG--CGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~---~~LP-fpd~sFDlV~ 458 (595)
.++.+||-+| .|.|..+..++.. .|++++.++ ...+++++.|....+..... ..+. .....||+|+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~-----~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vi 236 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD-----EKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVY 236 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH-----HHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEE
Confidence 3578999999 3577777777663 678888763 34455666676543321110 0000 0124699998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
..-. ...+..+.++|++||.+++...
T Consensus 237 d~~g--------~~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 237 ESVG--------GAMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp ECSC--------THHHHHHHHHEEEEEEEEECCC
T ss_pred ECCC--------HHHHHHHHHHHhcCCEEEEEeC
Confidence 7431 1578889999999999998753
No 370
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=77.60 E-value=0.81 Score=47.41 Aligned_cols=88 Identities=18% Similarity=0.149 Sum_probs=51.5
Q ss_pred CCCEEEEECCC-CchhHHHHhh---CCcEEEeCCchhHHHHHHHHHH-HcCCCeeEeecC---CCCCCCCCCceeEEEec
Q 007641 389 RTRVVLDVGCG-VASFGGFLFD---RGVLTMSFAPKDEHEAQVQFAL-ERGIPAISAVMG---TERLPFPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCG-tG~~a~~La~---r~V~giDisp~di~~aqvq~A~-ergi~~~~~v~d---~~~LPfpd~sFDlV~~~ 460 (595)
++.+||=+|+| .|.++..+++ ..|++++.++.. ...+. +.|....+...+ ...+. +.||+|+..
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~-----~~~~~~~lGa~~v~~~~~~~~~~~~~---~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSK-----KEEALKNFGADSFLVSRDQEQMQAAA---GTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG-----HHHHHHTSCCSEEEETTCHHHHHHTT---TCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHhcCCceEEeccCHHHHHHhh---CCCCEEEEC
Confidence 57899999975 3455555555 267888877543 23333 456543322111 11111 369999864
Q ss_pred ccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 461 RCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 461 ~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-. .. ..+..+.++|++||++++..
T Consensus 259 ~g-~~------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 259 VS-AV------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp CS-SC------CCSHHHHHHEEEEEEEEECC
T ss_pred CC-cH------HHHHHHHHHHhcCCEEEEEc
Confidence 31 11 13456778999999998764
No 371
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=77.38 E-value=4.5 Score=43.09 Aligned_cols=90 Identities=20% Similarity=0.115 Sum_probs=58.1
Q ss_pred CCCCEEEEECC-C-CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC--------------
Q 007641 388 KRTRVVLDVGC-G-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-------------- 448 (595)
Q Consensus 388 ~~~~rVLDIGC-G-tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-------------- 448 (595)
.++.+||=+|+ | .|.++..+++. .|++++.+ ....+++++.|....+.... ..+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~-----~~~~~~~~~lGa~~vi~~~~-~d~~~~~~~~~~~~~~~~ 300 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSS-----PQKAEICRAMGAEAIIDRNA-EGYRFWKDENTQDPKEWK 300 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHTCCEEEETTT-TTCCSEEETTEECHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC-----HHHHHHHHhhCCcEEEecCc-CcccccccccccchHHHH
Confidence 46889999997 3 56677777663 56777654 34556777777654432211 1110
Q ss_pred ---------CCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 449 ---------FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 449 ---------fpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.....||+|+-.- . ...+..+.++|+|||.+++..
T Consensus 301 ~~~~~i~~~t~g~g~Dvvid~~-------G-~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 301 RFGKRIRELTGGEDIDIVFEHP-------G-RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHTSCCEEEEEECS-------C-HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHhCCCCCcEEEEcC-------C-chhHHHHHHHhhCCcEEEEEe
Confidence 1124699998642 1 257888899999999999864
No 372
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=77.01 E-value=2.1 Score=43.71 Aligned_cols=89 Identities=17% Similarity=0.130 Sum_probs=52.5
Q ss_pred CCCEEEEECCC-CchhHHHHhh---C-CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----CCCCceeEEE
Q 007641 389 RTRVVLDVGCG-VASFGGFLFD---R-GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----FPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCG-tG~~a~~La~---r-~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----fpd~sFDlV~ 458 (595)
++.+||-+|+| .|.++..+++ . .|++++.++. ..+++++. ....+ ......+. .....||+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~-----~~~~~~~l-a~~v~-~~~~~~~~~~~~~~~~~g~D~vi 236 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPY-----RLAFARPY-ADRLV-NPLEEDLLEVVRRVTGSGVEVLL 236 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHH-----HHGGGTTT-CSEEE-CTTTSCHHHHHHHHHSSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH-----HHHHHHHh-HHhcc-CcCccCHHHHHHHhcCCCCCEEE
Confidence 57899999985 3556666655 3 6888887743 33333332 22111 11111100 0024599998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
-.- .....+..+.++|+|||.+++..
T Consensus 237 d~~-------g~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 237 EFS-------GNEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp ECS-------CCHHHHHHHHHHEEEEEEEEECC
T ss_pred ECC-------CCHHHHHHHHHHHhcCCEEEEEe
Confidence 643 12356888999999999998764
No 373
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=75.76 E-value=3.6 Score=41.66 Aligned_cols=91 Identities=16% Similarity=0.045 Sum_probs=54.9
Q ss_pred CCCCEEEEECC--CCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC---CCC--CCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE---RLP--FPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~---~LP--fpd~sFDlV 457 (595)
.++.+||-+|+ |.|..+..++. ..|++++.++. ..+.+++.|....+...+.. .+. .....+|+|
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~-----~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~v 218 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE-----KAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVV 218 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEE
Confidence 35789999995 56666666655 26888887743 33444455554332211100 000 012359999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+..-.. ..+..+.++|+|||++++..
T Consensus 219 i~~~g~--------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 219 YDSIGK--------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EECSCT--------TTHHHHHHTEEEEEEEEECC
T ss_pred EECCcH--------HHHHHHHHhhccCCEEEEEe
Confidence 865311 45778899999999998764
No 374
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=75.23 E-value=2.9 Score=42.86 Aligned_cols=91 Identities=15% Similarity=-0.012 Sum_probs=54.3
Q ss_pred CCCCEEEEECC--CCchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC---CC--CCCCCceeEE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE---RL--PFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~---~L--Pfpd~sFDlV 457 (595)
.++.+||-+|+ |.|..+..++. ..|++++.++. ..+.+++.|....+...+.. .+ -.....||+|
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 235 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK-----KLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLI 235 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEE
Confidence 45789999985 45555555555 26888887743 33445555654332211100 00 0122469999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+..-.. ..+..+.++|++||.+++..
T Consensus 236 i~~~G~--------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 236 LDCIGG--------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EESSCG--------GGHHHHHHHEEEEEEEEECC
T ss_pred EECCCc--------hHHHHHHHhccCCCEEEEEe
Confidence 865311 24677889999999999875
No 375
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=74.13 E-value=4.4 Score=41.88 Aligned_cols=91 Identities=12% Similarity=0.106 Sum_probs=56.6
Q ss_pred CCCCEEEEECCC--CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC---CC-CCCCCceeEEE
Q 007641 388 KRTRVVLDVGCG--VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE---RL-PFPGIVFDAVH 458 (595)
Q Consensus 388 ~~~~rVLDIGCG--tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~---~L-Pfpd~sFDlV~ 458 (595)
.++.+||=+|++ .|.++..|++. .|+++. ++. ..+++++.|...++...+.. .+ ....+.||+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~-----~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~ 236 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPH-----NFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYAL 236 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGG-----GHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHH-----HHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEE
Confidence 467899999983 67777777773 566663 432 34567777865443222110 00 01123499998
Q ss_pred ecccCcccccCHHHHHHHHHHhc-cCCcEEEEEe
Q 007641 459 CARCRVPWHIEGGKLLLELNRVL-RPGGFFIWSA 491 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvL-KPGG~Lvis~ 491 (595)
-.- .....+..+.++| |+||++++..
T Consensus 237 d~~-------g~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 237 DCI-------TNVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ESS-------CSHHHHHHHHHHSCTTCEEEEESS
T ss_pred ECC-------CchHHHHHHHHHhhcCCCEEEEEe
Confidence 632 1235677888889 6999998764
No 376
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=73.79 E-value=2.3 Score=43.72 Aligned_cols=89 Identities=13% Similarity=-0.013 Sum_probs=55.9
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC------CCCCCCCCceeE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT------ERLPFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~------~~LPfpd~sFDl 456 (595)
.++.+||-+|+ |.|..+..+++. .|++++.++. ..+++++.|....+...+. ..+. .+.||+
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~-----~~~~~~~lGa~~~~~~~~~~~~~~~~~~~--~~g~Dv 238 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTG-----KCEACERLGAKRGINYRSEDFAAVIKAET--GQGVDI 238 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH-----HHHHHHHHTCSEEEETTTSCHHHHHHHHH--SSCEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHhcCCCEEEeCCchHHHHHHHHHh--CCCceE
Confidence 46889999953 356666666653 6888887743 4455666676543322110 0111 346999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+..-. ...+..+.++|+|||.+++..
T Consensus 239 vid~~g--------~~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 239 ILDMIG--------AAYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEESCC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred EEECCC--------HHHHHHHHHHhccCCEEEEEE
Confidence 987431 125777889999999998764
No 377
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=73.30 E-value=2.1 Score=43.72 Aligned_cols=100 Identities=8% Similarity=-0.062 Sum_probs=60.9
Q ss_pred CCEEEEECCCCchhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-CCC---CCCCCceeEEEecccC
Q 007641 390 TRVVLDVGCGVASFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-ERL---PFPGIVFDAVHCARCR 463 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-~~L---Pfpd~sFDlV~~~~c~ 463 (595)
+..+||+=+|+|.++..++++ .++.+|..+..+..-+.++.. .-.+.+...|. ..+ --+...||+|++-.++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 456899999999999999885 689999987644322211111 12345555553 212 1233469999998632
Q ss_pred cccccCHHHHHHHHHH--hccCCcEEEEEeC
Q 007641 464 VPWHIEGGKLLLELNR--VLRPGGFFIWSAT 492 (595)
Q Consensus 464 v~~h~d~~~lL~El~R--vLKPGG~Lvis~p 492 (595)
-. ..+...++..+.. .+.|+|.++|--|
T Consensus 170 e~-k~~~~~vl~~L~~~~~r~~~Gi~v~WYP 199 (283)
T 2oo3_A 170 ER-KEEYKEIPYAIKNAYSKFSTGLYCVWYP 199 (283)
T ss_dssp CS-TTHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CC-CcHHHHHHHHHHHhCccCCCeEEEEEEe
Confidence 11 1133555555544 4678998887644
No 378
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=73.13 E-value=3.2 Score=43.96 Aligned_cols=90 Identities=16% Similarity=0.050 Sum_probs=56.2
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC--------------
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-------------- 448 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-------------- 448 (595)
.++.+||=+|+ |.|.++..+++. .|++++.+ ....+++++.|....+...+ ..+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~-----~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS-----AQKEAAVRALGCDLVINRAE-LGITDDIADDPRRVVETG 292 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTTCCCEEEHHH-HTCCTTGGGCHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhcCCCEEEeccc-ccccccccccccccchhh
Confidence 46889999997 355666666653 56777655 34456666777654432211 0000
Q ss_pred ---------CCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 449 ---------FPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 449 ---------fpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.....||+|+-.-. ...+..+.++|++||.+++..
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTG--------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSC--------HHHHHHHHHHSCTTCEEEESC
T ss_pred hHHHHHHHHHhCCCceEEEECCC--------chHHHHHHHHHhcCCEEEEEe
Confidence 00245899986431 146788889999999999874
No 379
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=72.64 E-value=2.1 Score=39.07 Aligned_cols=44 Identities=20% Similarity=0.227 Sum_probs=31.9
Q ss_pred CCCCCCCceeEEEecccCccc-ccCHHHHHHHHHHhccCCcEEEE
Q 007641 446 RLPFPGIVFDAVHCARCRVPW-HIEGGKLLLELNRVLRPGGFFIW 489 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~c~v~~-h~d~~~lL~El~RvLKPGG~Lvi 489 (595)
..-+|.++||.|+.....-.. ..-+..+|..+++.|||||.|..
T Consensus 52 ~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 52 SITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 345678999999975421101 11238999999999999999996
No 380
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=71.77 E-value=72 Score=32.36 Aligned_cols=102 Identities=13% Similarity=0.041 Sum_probs=54.2
Q ss_pred CCEEEEECCCCchhHHHHhh-CCcEEEeCCchhHHHHHHHHHHHcC----CCeeEeecCCCC-----C---CCCCCceeE
Q 007641 390 TRVVLDVGCGVASFGGFLFD-RGVLTMSFAPKDEHEAQVQFALERG----IPAISAVMGTER-----L---PFPGIVFDA 456 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~-r~V~giDisp~di~~aqvq~A~erg----i~~~~~v~d~~~-----L---Pfpd~sFDl 456 (595)
.+.||+||||.=..+..|.. ..+..++++-..+-....+...+.+ -...++..+... + .|.... =+
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~-Pt 181 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSA-RT 181 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTS-CE
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCC-CE
Confidence 46799999998888777763 2344444443332222223332221 112333344432 1 111111 24
Q ss_pred EEecccCccccc--CHHHHHHHHHHhccCCcEEEEEeC
Q 007641 457 VHCARCRVPWHI--EGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 457 V~~~~c~v~~h~--d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
++...|++++.. ....+|+.+...+.||++|++...
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEec
Confidence 444445444332 236788888888899999998753
No 381
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=71.63 E-value=9.9 Score=38.84 Aligned_cols=94 Identities=14% Similarity=0.004 Sum_probs=53.3
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEE-EeCCchhHHHHHHHHHHHcCCCeeEeec-----CCCCCCCCCCceeE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLT-MSFAPKDEHEAQVQFALERGIPAISAVM-----GTERLPFPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~g-iDisp~di~~aqvq~A~ergi~~~~~v~-----d~~~LPfpd~sFDl 456 (595)
.++.+||=+|+ |.|.++..|++. .+++ ++..+. ......++++.|...++... ....+--..+.||+
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~--~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dv 243 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD--IQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRL 243 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC--HHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSE
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc--hHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceE
Confidence 36889999997 467777777763 3433 333322 12234566677766443221 11111111114899
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+-.- .. ..+..+.++|+|||.+++..
T Consensus 244 vid~~-------g~-~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 244 ALNCV-------GG-KSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp EEESS-------CH-HHHHHHHTTSCTTCEEEECC
T ss_pred EEECC-------Cc-HHHHHHHHhhCCCCEEEEEe
Confidence 88632 11 22345789999999999864
No 382
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=71.00 E-value=4.6 Score=41.47 Aligned_cols=32 Identities=22% Similarity=0.242 Sum_probs=27.0
Q ss_pred CCCCEEEEECCCCchhHHHHhh--CCcEEEeCCc
Q 007641 388 KRTRVVLDVGCGVASFGGFLFD--RGVLTMSFAP 419 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~--r~V~giDisp 419 (595)
.++..|||.-||+|..+..... +..+|+|+.+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~ 274 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAP 274 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESST
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCc
Confidence 3688999999999987766554 6899999998
No 383
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=70.91 E-value=3.6 Score=42.06 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=28.5
Q ss_pred CCCCEEEEECCCCchhHHHHhh--CCcEEEeCCchhH
Q 007641 388 KRTRVVLDVGCGVASFGGFLFD--RGVLTMSFAPKDE 422 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~--r~V~giDisp~di 422 (595)
.++..|||.-||+|..+..... +..+|+|+.+...
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~ 287 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYV 287 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHH
Confidence 3688999999999997766655 6899999997643
No 384
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=70.83 E-value=53 Score=35.66 Aligned_cols=139 Identities=11% Similarity=0.171 Sum_probs=74.3
Q ss_pred HHHHHHhcccccCC--CCCCEEEEECCCCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcC--CCeeEeecCCCC
Q 007641 374 IDFIQESVPDVAWG--KRTRVVLDVGCGVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERG--IPAISAVMGTER 446 (595)
Q Consensus 374 id~L~~~L~~l~~~--~~~~rVLDIGCGtG~~a~~La~r---~V~giDisp~di~~aqvq~A~erg--i~~~~~v~d~~~ 446 (595)
+..|..+++..... ....+|||+-||.|.+..-|.+. -|.++|+++.... -+....+ ....+...|+..
T Consensus 70 ~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~----ty~~N~~~~p~~~~~~~DI~~ 145 (482)
T 3me5_A 70 FAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVR----TYKANHYCDPATHHFNEDIRD 145 (482)
T ss_dssp HHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHH----HHHHHSCCCTTTCEEESCTHH
T ss_pred HHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHH----HHHHhcccCCCcceeccchhh
Confidence 45566666642221 23468999999999999888775 3678888864322 2222221 122333344322
Q ss_pred CCC-----------------CCCceeEEEecccCccccc-----------------CH-HHHHHHHHH---hccCCcEEE
Q 007641 447 LPF-----------------PGIVFDAVHCARCRVPWHI-----------------EG-GKLLLELNR---VLRPGGFFI 488 (595)
Q Consensus 447 LPf-----------------pd~sFDlV~~~~c~v~~h~-----------------d~-~~lL~El~R---vLKPGG~Lv 488 (595)
+.. .-..+|+|+...+.-.+.. +. ..++.++.| .++|. +|+
T Consensus 146 i~~~~~~~~~~~~~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk-~fv 224 (482)
T 3me5_A 146 ITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPA-MFV 224 (482)
T ss_dssp HHCTTCTTSCHHHHHHHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCS-EEE
T ss_pred hhhccccccchhhHHhhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCc-EEE
Confidence 210 0125899997552111111 11 134555444 45785 333
Q ss_pred EE-eCCCCCcCchhHHHHHHHHHHHHHcCCEE
Q 007641 489 WS-ATPVYQKLPEDVEIWNAMSQLIKAMCWEL 519 (595)
Q Consensus 489 is-~pp~~~~l~e~i~~w~~le~Lak~~Gw~~ 519 (595)
+- ++.+... ..-..|..+...+..+||.+
T Consensus 225 lENV~gl~s~--~~g~~f~~i~~~L~~lGY~v 254 (482)
T 3me5_A 225 LENVKNLKSH--DKGKTFRIIMQTLDELGYDV 254 (482)
T ss_dssp EEEETTTTTG--GGGHHHHHHHHHHHHTTEEE
T ss_pred EeCcHHHhcc--cCCcHHHHHHHHHhcCCcEE
Confidence 33 3333221 22346788888899999886
No 385
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=69.39 E-value=4.5 Score=42.39 Aligned_cols=38 Identities=13% Similarity=0.260 Sum_probs=32.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhC-----CcEEEeCCchhHHHH
Q 007641 388 KRTRVVLDVGCGVASFGGFLFDR-----GVLTMSFAPKDEHEA 425 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La~r-----~V~giDisp~di~~a 425 (595)
.++..+||..||.|..+..|+++ .|+|+|.++..+..+
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A 98 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVA 98 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 46889999999999999999875 599999998766544
No 386
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=68.91 E-value=8.8 Score=39.09 Aligned_cols=89 Identities=11% Similarity=0.051 Sum_probs=53.8
Q ss_pred CC--CEEEEECC--CCchhHHHHhh---C-CcEEEeCCchhHHHHHHHHHHH-cCCCeeEeecCCCC----C-CCCCCce
Q 007641 389 RT--RVVLDVGC--GVASFGGFLFD---R-GVLTMSFAPKDEHEAQVQFALE-RGIPAISAVMGTER----L-PFPGIVF 454 (595)
Q Consensus 389 ~~--~rVLDIGC--GtG~~a~~La~---r-~V~giDisp~di~~aqvq~A~e-rgi~~~~~v~d~~~----L-Pfpd~sF 454 (595)
++ .+||-+|+ |.|..+..++. . .|++++.++. ..+.+.+ .|....+-..+ .. + ....+.+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~-----~~~~~~~~~g~~~~~d~~~-~~~~~~~~~~~~~~~ 231 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE-----KCILLTSELGFDAAINYKK-DNVAEQLRESCPAGV 231 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHH-----HHHHHHHTSCCSEEEETTT-SCHHHHHHHHCTTCE
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHH-----HHHHHHHHcCCceEEecCc-hHHHHHHHHhcCCCC
Confidence 56 89999998 35555555554 2 6778887642 3344444 55543322111 11 0 0011269
Q ss_pred eEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 455 DAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 455 DlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+|+..-. ...+..+.++|++||++++..
T Consensus 232 d~vi~~~G--------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 232 DVYFDNVG--------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp EEEEESCC--------HHHHHHHHHTEEEEEEEEECC
T ss_pred CEEEECCC--------HHHHHHHHHHhccCcEEEEEC
Confidence 99987531 267888999999999999864
No 387
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=68.87 E-value=5.1 Score=40.88 Aligned_cols=87 Identities=16% Similarity=0.125 Sum_probs=55.3
Q ss_pred CCCCEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC------CCCCceeE
Q 007641 388 KRTRVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP------FPGIVFDA 456 (595)
Q Consensus 388 ~~~~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP------fpd~sFDl 456 (595)
.++.+||-+|+ |.|.++..+++. .|+++ .++ ...+++++.|... +. ....+. .....||+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~-----~~~~~~~~lGa~~-i~--~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARG-----SDLEYVRDLGATP-ID--ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECH-----HHHHHHHHHTSEE-EE--TTSCHHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCH-----HHHHHHHHcCCCE-ec--cCCCHHHHHHHHhcCCCceE
Confidence 46889999994 356676666663 56776 443 3456667777654 22 111110 12246999
Q ss_pred EEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 457 VHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 457 V~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+-.- - ...+..+.++|+|||.+++..
T Consensus 220 vid~~---g-----~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 220 VYDTL---G-----GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEESS---C-----THHHHHHHHHEEEEEEEEESC
T ss_pred EEECC---C-----cHHHHHHHHHHhcCCeEEEEc
Confidence 98642 1 157888899999999999764
No 388
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=68.06 E-value=21 Score=31.19 Aligned_cols=91 Identities=19% Similarity=0.114 Sum_probs=49.4
Q ss_pred CCEEEEECCCCchhHHHHhh------CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC-CCC-CCCCceeEEEecc
Q 007641 390 TRVVLDVGCGVASFGGFLFD------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE-RLP-FPGIVFDAVHCAR 461 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~------r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~-~LP-fpd~sFDlV~~~~ 461 (595)
..+|+=+||| .++..+++ ..|+++|.++. .++.+...+..++....... .|. ..-..+|+|++..
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~-----~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRT-----RVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHH-----HHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHH-----HHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 3568888886 34443333 27999999854 33444456654433322111 110 1124689888743
Q ss_pred cCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 462 c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
... .....+....|.|.|+.+++...
T Consensus 80 ---~~~-~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 80 ---PNG-YEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp ---SCH-HHHHHHHHHHHHHCSSSEEEEEE
T ss_pred ---CCh-HHHHHHHHHHHHHCCCCeEEEEE
Confidence 211 11233445677788988877654
No 389
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=68.05 E-value=7.3 Score=41.20 Aligned_cols=44 Identities=11% Similarity=0.034 Sum_probs=34.6
Q ss_pred CCCCEEEEECCCCchhHHHHh-h-----CCcEEEeCCchhHHHHHHHHHH
Q 007641 388 KRTRVVLDVGCGVASFGGFLF-D-----RGVLTMSFAPKDEHEAQVQFAL 431 (595)
Q Consensus 388 ~~~~rVLDIGCGtG~~a~~La-~-----r~V~giDisp~di~~aqvq~A~ 431 (595)
.++.+||||||+.|.++..++ . ..|++++..|......+.+.+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 468899999999999998877 3 2689999998876666555554
No 390
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=65.47 E-value=23 Score=37.65 Aligned_cols=33 Identities=12% Similarity=-0.054 Sum_probs=26.0
Q ss_pred CCEEEEECCCCchhHHHHhhCC---------cEEEeCCchhH
Q 007641 390 TRVVLDVGCGVASFGGFLFDRG---------VLTMSFAPKDE 422 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r~---------V~giDisp~di 422 (595)
..+|||+-||.|.+...|.+.+ |.++|+++...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~ 51 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAI 51 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHH
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHH
Confidence 3589999999999888887753 67789987543
No 391
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=65.29 E-value=7.1 Score=40.07 Aligned_cols=90 Identities=18% Similarity=0.069 Sum_probs=52.8
Q ss_pred CCEEEEECCC-CchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC--C--CCCceeEEEecc
Q 007641 390 TRVVLDVGCG-VASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP--F--PGIVFDAVHCAR 461 (595)
Q Consensus 390 ~~rVLDIGCG-tG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP--f--pd~sFDlV~~~~ 461 (595)
+.+||-+|+| .|.++..++. ..|++++.++.. ....+++++.|...+ . .. .+. + ..+.||+|+..-
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~--~~~~~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~d~vid~~ 254 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPT--EVEQTVIEETKTNYY--N-SS-NGYDKLKDSVGKFDVIIDAT 254 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCC--HHHHHHHHHHTCEEE--E-CT-TCSHHHHHHHCCEEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccc--hHHHHHHHHhCCcee--c-hH-HHHHHHHHhCCCCCEEEECC
Confidence 7899999983 2344444444 268888887510 023345555665432 1 11 110 0 014699998753
Q ss_pred cCcccccCHHHHH-HHHHHhccCCcEEEEEeC
Q 007641 462 CRVPWHIEGGKLL-LELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 462 c~v~~h~d~~~lL-~El~RvLKPGG~Lvis~p 492 (595)
. . ...+ ..+.++|+|||.+++...
T Consensus 255 g-~------~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 255 G-A------DVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp C-C------CTHHHHHHGGGEEEEEEEEECSC
T ss_pred C-C------hHHHHHHHHHHHhcCCEEEEEec
Confidence 1 1 1245 888999999999998743
No 392
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=57.24 E-value=14 Score=39.10 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=24.9
Q ss_pred CCEEEEECCCCchhHHHHhhC-----------CcEEEeCCchh
Q 007641 390 TRVVLDVGCGVASFGGFLFDR-----------GVLTMSFAPKD 421 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r-----------~V~giDisp~d 421 (595)
.-.|+|+|.|.|.++.-+++. .+..|++|+..
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~L 123 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVL 123 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHH
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHH
Confidence 346999999999988766541 57889999853
No 393
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=53.91 E-value=21 Score=36.33 Aligned_cols=95 Identities=11% Similarity=0.072 Sum_probs=53.4
Q ss_pred CCC-CEEEEECC--CCchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC--CC----CC-C---CC
Q 007641 388 KRT-RVVLDVGC--GVASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT--ER----LP-F---PG 451 (595)
Q Consensus 388 ~~~-~rVLDIGC--GtG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~--~~----LP-f---pd 451 (595)
.++ .+||=+|+ |.|.++..|++. .++++.-+..... ....++++.|...++...+. .. +. . ..
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~-~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD-EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH-HHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccH-HHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccC
Confidence 357 89999997 366677777663 5566654433211 12344556676543322110 11 10 0 12
Q ss_pred CceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 452 IVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 452 ~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
..||+|+-.- ....++ .+.++|+|||++++..
T Consensus 244 ~g~Dvvid~~-------G~~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 244 GEAKLALNCV-------GGKSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp CCEEEEEESS-------CHHHHH-HHHHTSCTTCEEEECC
T ss_pred CCceEEEECC-------CchhHH-HHHHHhccCCEEEEec
Confidence 4699998642 122333 6789999999999864
No 394
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=52.55 E-value=6.3 Score=41.20 Aligned_cols=95 Identities=16% Similarity=-0.002 Sum_probs=48.8
Q ss_pred CCCEEEEECCCCchhHHHHhh------CCcEEEeCCchhHHHHHHHHHHH-cCCCeeEeecCCCCCCCCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFD------RGVLTMSFAPKDEHEAQVQFALE-RGIPAISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~------r~V~giDisp~di~~aqvq~A~e-rgi~~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
++.+|+=||+| .++..+++ ..|+++|.++.. .+.+.+ .+..+.........+.-.-..+|+|+..-
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~Ga~V~~~d~~~~~-----l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMGATVTVLDINIDK-----LRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAV 239 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHH-----HHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECC
Confidence 47899999985 44433333 268888887542 222323 34332111111111100002579998742
Q ss_pred cCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 462 c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.++....+..+..++.+.|||||+|+...
T Consensus 240 -~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 240 -LVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp -CCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred -CcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 12221111223466778899999988653
No 395
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=50.96 E-value=14 Score=37.88 Aligned_cols=90 Identities=13% Similarity=0.035 Sum_probs=52.6
Q ss_pred CCCCEEEEECCC-CchhHHHHhh----CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-----CCCCCCCCceeEE
Q 007641 388 KRTRVVLDVGCG-VASFGGFLFD----RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-----ERLPFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGCG-tG~~a~~La~----r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-----~~LPfpd~sFDlV 457 (595)
.++.+||=+|+| .|.++..|++ ..|++++.++ ...+++++.|...++...+. ..+. ....||+|
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~-----~~~~~~~~lGa~~vi~~~~~~~~~v~~~~-~g~g~Dvv 258 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKE-----EKLKLAERLGADHVVDARRDPVKQVMELT-RGRGVNVA 258 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSH-----HHHHHHHHTTCSEEEETTSCHHHHHHHHT-TTCCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCH-----HHHHHHHHhCCCEEEeccchHHHHHHHHh-CCCCCcEE
Confidence 357899999986 3344445544 2477887763 34566777776543322111 1111 12369999
Q ss_pred EecccCcccccCHHH--HHHHHHHhccCCcEEEEEeC
Q 007641 458 HCARCRVPWHIEGGK--LLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~--lL~El~RvLKPGG~Lvis~p 492 (595)
+-.-. ... .+..+.++ +||.+++...
T Consensus 259 id~~G-------~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 259 MDFVG-------SQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp EESSC-------CHHHHHHGGGGEE--EEEEEEECCC
T ss_pred EECCC-------CchHHHHHHHhhc--CCCEEEEEeC
Confidence 86421 122 56666666 9999988653
No 396
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=50.02 E-value=83 Score=33.20 Aligned_cols=90 Identities=16% Similarity=0.089 Sum_probs=54.7
Q ss_pred CCEEEEECCCCchhHHHHhh------CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC----CCCCCCCCceeEEEe
Q 007641 390 TRVVLDVGCGVASFGGFLFD------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT----ERLPFPGIVFDAVHC 459 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~------r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~----~~LPfpd~sFDlV~~ 459 (595)
..+||=+|+| .++..+++ ..|+++|.++. .++.++..|.++++..... ..... ...|+|++
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~-----~v~~~~~~g~~vi~GDat~~~~L~~agi--~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPD-----HIETLRKFGMKVFYGDATRMDLLESAGA--AKAEVLIN 74 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHH-----HHHHHHHTTCCCEESCTTCHHHHHHTTT--TTCSEEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHH-----HHHHHHhCCCeEEEcCCCCHHHHHhcCC--CccCEEEE
Confidence 4568888876 45544443 27999999865 3445556677665544332 12222 45888887
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.. . .......+..+.|-|.|...++....
T Consensus 75 ~~---~-~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 75 AI---D-DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CC---S-SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CC---C-ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 43 1 11234566677888889988877643
No 397
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=49.63 E-value=51 Score=32.45 Aligned_cols=103 Identities=10% Similarity=0.018 Sum_probs=56.9
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----C-----CCCc
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----F-----PGIV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----f-----pd~s 453 (595)
.+++||=.|++.|. ++..|+++ .|+.++.................+..+.+..+|..+.. + .-+.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 36789999987662 44555554 67777776543333333333444556666666643211 0 0135
Q ss_pred eeEEEecccCccc-c----cCH--------------HHHHHHHHHhccCCcEEEEEe
Q 007641 454 FDAVHCARCRVPW-H----IEG--------------GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 454 FDlV~~~~c~v~~-h----~d~--------------~~lL~El~RvLKPGG~Lvis~ 491 (595)
.|+++.+-..... . ... -.+++.+.+.|+.+|.+++..
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 7888865322111 0 111 145566777788899888764
No 398
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=49.47 E-value=2.6e+02 Score=31.64 Aligned_cols=34 Identities=21% Similarity=0.157 Sum_probs=25.6
Q ss_pred CCCEEEEECCCCchhHHHHhhC---------CcEEEeCCchhH
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR---------GVLTMSFAPKDE 422 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r---------~V~giDisp~di 422 (595)
...+|||+=||.|.++.-|.+. -+.++|+++..+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~ 253 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFAC 253 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHH
Confidence 3468999999999887666542 367899987644
No 399
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=49.24 E-value=11 Score=39.79 Aligned_cols=96 Identities=15% Similarity=0.074 Sum_probs=50.9
Q ss_pred CCCEEEEECCCC-chhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecC-------C------------C
Q 007641 389 RTRVVLDVGCGV-ASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMG-------T------------E 445 (595)
Q Consensus 389 ~~~rVLDIGCGt-G~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d-------~------------~ 445 (595)
++.+|+=||+|. |..+..++. ..|+++|..+... +.+.+.|........+ . .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l-----~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVA-----EQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGH-----HHHHHTTCEECCCC-------------CHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHcCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence 568999999984 344444443 3789999986532 2333444322110000 0 0
Q ss_pred CCCCCCCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 446 RLPFPGIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
.+.-.-..+|+|+..- +++-...+..+-+++.+.+|||.+++=.
T Consensus 258 ~l~e~l~~aDIVI~tv-~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 258 ALEDAITKFDIVITTA-LVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHTTCSEEEECC-CCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHHHhcCCEEEECC-CCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 0000014689999742 2222112223447888999999887743
No 400
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=49.10 E-value=11 Score=38.91 Aligned_cols=92 Identities=15% Similarity=0.099 Sum_probs=54.4
Q ss_pred CCCCEEEEECC-C-CchhHHHHhhC---CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC---CCCCCCCCceeEEEe
Q 007641 388 KRTRVVLDVGC-G-VASFGGFLFDR---GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---ERLPFPGIVFDAVHC 459 (595)
Q Consensus 388 ~~~~rVLDIGC-G-tG~~a~~La~r---~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~---~~LPfpd~sFDlV~~ 459 (595)
.++.+||=+|+ | .|.++..+++. .|++++ ++. ..+++++.|....+...+. ..+. ....||+|+-
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~-----~~~~~~~lGa~~v~~~~~~~~~~~~~-~~~g~D~vid 254 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQD-----ASELVRKLGADDVIDYKSGSVEEQLK-SLKPFDFILD 254 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGG-----GHHHHHHTTCSEEEETTSSCHHHHHH-TSCCBSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChH-----HHHHHHHcCCCEEEECCchHHHHHHh-hcCCCCEEEE
Confidence 46789999993 4 56666666663 577776 432 2355666676543322110 0110 1135999986
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
.-. .....+....++|++||.+++...
T Consensus 255 ~~g------~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 255 NVG------GSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp SSC------TTHHHHGGGGBCSSSCCEEEESCC
T ss_pred CCC------ChhhhhHHHHHhhcCCcEEEEeCC
Confidence 421 112355677889999999998653
No 401
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=47.16 E-value=1.9e+02 Score=27.39 Aligned_cols=60 Identities=12% Similarity=-0.008 Sum_probs=37.7
Q ss_pred CEEEEECCCCchhHHHHhhC------CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecc
Q 007641 391 RVVLDVGCGVASFGGFLFDR------GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r------~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
.+||=+|+ |.++.+|+++ .|++++.++..... .... .+.+...|..++. -..+|+|+...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~--~~~~~~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEA-----IRAS--GAEPLLWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHH-----HHHT--TEEEEESSSSCCC--CTTCCEEEECC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhh-----HhhC--CCeEEEecccccc--cCCCCEEEECC
Confidence 57999994 8888777662 68888887643211 1122 3455556655554 35689888653
No 402
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=46.49 E-value=1.9e+02 Score=34.32 Aligned_cols=127 Identities=13% Similarity=0.117 Sum_probs=67.4
Q ss_pred CCCEEEEECCCCchhHHHHhhCC----cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-----------------CCC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDRG----VLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-----------------ERL 447 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r~----V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-----------------~~L 447 (595)
...++||+-||.|.+..-|.+++ |.++|+++..... +.... ....++..+. ..+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~t----y~~N~-p~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQA----FRLNN-PGSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHH----HHHHC-TTSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHH----HHHhC-CCCccccccHHHHhhhccchhhhhhhhhhc
Confidence 35689999999999888886654 4688998653322 22222 1222222221 123
Q ss_pred CCCCCceeEEEecc-cCcccccC---H-------HHHH---HHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHH
Q 007641 448 PFPGIVFDAVHCAR-CRVPWHIE---G-------GKLL---LELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIK 513 (595)
Q Consensus 448 Pfpd~sFDlV~~~~-c~v~~h~d---~-------~~lL---~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak 513 (595)
|. .+.+|+|+... |--+-... . ..++ ..+.+.++|--+|+=.++.+... .....+..+...+.
T Consensus 614 p~-~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~--~~~~~~~~i~~~L~ 690 (1002)
T 3swr_A 614 PQ-KGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSF--KRSMVLKLTLRCLV 690 (1002)
T ss_dssp CC-TTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTT--GGGHHHHHHHHHHH
T ss_pred cc-CCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhcc--CcchHHHHHHHHHH
Confidence 32 25699999765 22111111 0 1222 34555678864333223332222 12245677778888
Q ss_pred HcCCEEEEEe
Q 007641 514 AMCWELVSIS 523 (595)
Q Consensus 514 ~~Gw~~v~~~ 523 (595)
.+||.+....
T Consensus 691 ~lGY~v~~~v 700 (1002)
T 3swr_A 691 RMGYQCTFGV 700 (1002)
T ss_dssp HHTCEEEEEE
T ss_pred hcCCeEEEEE
Confidence 9999875443
No 403
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=46.41 E-value=24 Score=39.30 Aligned_cols=71 Identities=17% Similarity=0.202 Sum_probs=43.0
Q ss_pred CCCCCCCceeEEEecc--cCccccc----C----HHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHc
Q 007641 446 RLPFPGIVFDAVHCAR--CRVPWHI----E----GGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAM 515 (595)
Q Consensus 446 ~LPfpd~sFDlV~~~~--c~v~~h~----d----~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~ 515 (595)
.+| +.+.||+|+++- .+-.||- | ...+-....+.|+|||.|++.. |.+... ..-..+..++++.
T Consensus 215 G~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~---YGyADr--~sE~vv~alaRkF 288 (670)
T 4gua_A 215 GFP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKS---YGYADR--NSEDVVTALARKF 288 (670)
T ss_dssp CCC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE---SCCCSH--HHHHHHHHHHHTE
T ss_pred CCC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEE---eecccc--chHHHHHHHHhhe
Confidence 355 346899999864 2222332 1 1244556889999999999886 333222 2224566777777
Q ss_pred CCEEEEE
Q 007641 516 CWELVSI 522 (595)
Q Consensus 516 Gw~~v~~ 522 (595)
-+..+..
T Consensus 289 ~~~rv~~ 295 (670)
T 4gua_A 289 VRVSAAR 295 (670)
T ss_dssp EEEEEEC
T ss_pred eeeeeeC
Confidence 7665544
No 404
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=44.88 E-value=77 Score=30.80 Aligned_cols=104 Identities=13% Similarity=-0.037 Sum_probs=56.3
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----C-----CCCc
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----F-----PGIV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----f-----pd~s 453 (595)
.+++||=.|++.|. ++..|+++ .|+.++.................+..+....+|..+.. + .-+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999987662 44555554 56666554432222222333344556666666643211 0 0125
Q ss_pred eeEEEecccCcccc----cCH--------------HHHHHHHHHhccCCcEEEEEeC
Q 007641 454 FDAVHCARCRVPWH----IEG--------------GKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 454 FDlV~~~~c~v~~h----~d~--------------~~lL~El~RvLKPGG~Lvis~p 492 (595)
.|+++.+-...... ... -.+++.+.+.|+.+|.+++...
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 78888754222111 111 1456667788888998887743
No 405
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=43.87 E-value=11 Score=38.25 Aligned_cols=88 Identities=16% Similarity=0.132 Sum_probs=47.7
Q ss_pred CCCCEEEEECCC--CchhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC---CCC-CCCCCceeEE
Q 007641 388 KRTRVVLDVGCG--VASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGT---ERL-PFPGIVFDAV 457 (595)
Q Consensus 388 ~~~~rVLDIGCG--tG~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~---~~L-Pfpd~sFDlV 457 (595)
.++.+||=+|++ .|.++..|++. .|++++ +.. ..+.++ .|....+. .+. ..+ ....+.||+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~-----~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv 212 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STF-----KHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIV 212 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGG-----GHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHH-----HHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEE
Confidence 468899999983 56677777663 355555 322 223343 55543332 110 000 0123579999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
+-.-. ...+..+.++|+|||++++..
T Consensus 213 ~d~~g--------~~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 213 LDCLC--------GDNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEECC---------------CTTEEEEEEEEEEC
T ss_pred EECCC--------chhHHHHHHHhhcCCEEEEEC
Confidence 86321 122367889999999999875
No 406
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=43.36 E-value=10 Score=41.51 Aligned_cols=86 Identities=19% Similarity=0.070 Sum_probs=48.6
Q ss_pred CCCEEEEECCC-CchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 389 RTRVVLDVGCG-VASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 389 ~~~rVLDIGCG-tG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
.+.+|+=||+| .|.....+++ ..|+++|.++. ....|...|... .+...+ + ..+|+|+..- ..
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~-----~~~~A~~~Ga~~----~~l~e~-l--~~aDvVi~at-gt 339 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI-----NALQAMMEGFDV----VTVEEA-I--GDADIVVTAT-GN 339 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH-----HHHHHHHTTCEE----CCHHHH-G--GGCSEEEECS-SS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHcCCEE----ecHHHH-H--hCCCEEEECC-CC
Confidence 57899999986 2332222322 26888888754 223455566532 111111 1 3589998752 11
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEEeC
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis~p 492 (595)
...+. .++.+.|||||+|+....
T Consensus 340 ~~~i~-----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 340 KDIIM-----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp SCSBC-----HHHHHHSCTTCEEEECSS
T ss_pred HHHHH-----HHHHHhcCCCcEEEEeCC
Confidence 11111 356677999999987653
No 407
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=43.02 E-value=12 Score=37.99 Aligned_cols=65 Identities=17% Similarity=0.045 Sum_probs=38.6
Q ss_pred CceeEEEecc--cCccccc----CH----HHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEE
Q 007641 452 IVFDAVHCAR--CRVPWHI----EG----GKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVS 521 (595)
Q Consensus 452 ~sFDlV~~~~--c~v~~h~----d~----~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~ 521 (595)
+.||+|+++- .+-.||- |. ..+-....+.|+|||.|++..-...++.. -..+..++++.-+..+.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~S-----E~vV~alARkF~~~rv~ 284 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTS-----ERVICVLGRKFRSSRAL 284 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHH-----HHHHHHHHTTEEEEEEE
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccch-----HHHHHHHHhhheeeeee
Confidence 7899999864 2222332 11 24555678999999999998633222222 24555666665554443
No 408
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=42.92 E-value=1e+02 Score=29.59 Aligned_cols=104 Identities=19% Similarity=0.135 Sum_probs=56.3
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----C-----CCCc
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----F-----PGIV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----f-----pd~s 453 (595)
.+++||=.|++.|. ++..|+++ .|+.++...........+.....+..+.+..+|..+.. + .-+.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999987662 44555554 56665654332222222333344556666666643221 0 0025
Q ss_pred eeEEEecccCcccc----cCH--------------HHHHHHHHHhccCCcEEEEEeC
Q 007641 454 FDAVHCARCRVPWH----IEG--------------GKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 454 FDlV~~~~c~v~~h----~d~--------------~~lL~El~RvLKPGG~Lvis~p 492 (595)
.|+++.+-...... .+. -.+++.+.+.|+.+|.+++...
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 78888654322111 111 1455677788888999887754
No 409
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=42.72 E-value=11 Score=39.05 Aligned_cols=94 Identities=15% Similarity=0.081 Sum_probs=46.9
Q ss_pred CCCEEEEECCCCchhHHHHhh------CCcEEEeCCchhHHHHHHHHHHH-cCCCeeEeecCCCCCCCCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFD------RGVLTMSFAPKDEHEAQVQFALE-RGIPAISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~------r~V~giDisp~di~~aqvq~A~e-rgi~~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
.+.+|+=+|+| ..+..+++ ..|+++|.++... +.+.+ .+..+.....+...+.-.-..+|+|+..-
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~-----~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRL-----QYLDDVFGGRVITLTATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHH-----HHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECC
Confidence 35799999985 44443333 2688889875422 22222 34332111111111100002589998743
Q ss_pred cCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 462 c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
.+.....+..+..++.+.|||||.++..
T Consensus 238 -g~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 238 -LVPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp -C-------CCSCHHHHTTSCTTCEEEEC
T ss_pred -CCCccccchhHHHHHHHhhcCCCEEEEE
Confidence 1111011122356778889999998865
No 410
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=41.24 E-value=1.2e+02 Score=25.20 Aligned_cols=88 Identities=11% Similarity=-0.059 Sum_probs=42.9
Q ss_pred CCEEEEECCCCchhHHHHhh----C--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC---CC-CCCCceeEEEe
Q 007641 390 TRVVLDVGCGVASFGGFLFD----R--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---LP-FPGIVFDAVHC 459 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~----r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~---LP-fpd~sFDlV~~ 459 (595)
..+|+=+|+| .++..++. . .|+++|.++.... ......++. ....+... +. ..-..+|+|+.
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~----~~~~~~~~~--~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICK----KASAEIDAL--VINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHHCSSE--EEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHH----HHHHhcCcE--EEEcCCCCHHHHHHcCcccCCEEEE
Confidence 4678888875 44444433 3 6888888653221 122222432 22222211 10 11235899887
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
.. ... .....+..+.+.+.++ .+++.
T Consensus 76 ~~---~~~-~~~~~~~~~~~~~~~~-~ii~~ 101 (140)
T 1lss_A 76 VT---GKE-EVNLMSSLLAKSYGIN-KTIAR 101 (140)
T ss_dssp CC---SCH-HHHHHHHHHHHHTTCC-CEEEE
T ss_pred ee---CCc-hHHHHHHHHHHHcCCC-EEEEE
Confidence 53 111 2234555667778886 44443
No 411
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=41.06 E-value=1.2e+02 Score=29.15 Aligned_cols=74 Identities=11% Similarity=-0.028 Sum_probs=40.0
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC-C----C------CCC
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL-P----F------PGI 452 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L-P----f------pd~ 452 (595)
.+++||=.|++.|. ++..|+++ .|++++.+..........+....+..+.++.+|.... . + .-+
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 36789989987552 44444444 6788887765443333222222233455666665432 1 0 013
Q ss_pred ceeEEEeccc
Q 007641 453 VFDAVHCARC 462 (595)
Q Consensus 453 sFDlV~~~~c 462 (595)
.+|+++.+-.
T Consensus 91 ~iD~lv~nAg 100 (311)
T 3o26_A 91 KLDILVNNAG 100 (311)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 5899887653
No 412
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.49 E-value=79 Score=28.47 Aligned_cols=93 Identities=20% Similarity=0.063 Sum_probs=48.9
Q ss_pred CCEEEEECCCC-ch-hHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC-CC-CC-CCCceeEEEecc
Q 007641 390 TRVVLDVGCGV-AS-FGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE-RL-PF-PGIVFDAVHCAR 461 (595)
Q Consensus 390 ~~rVLDIGCGt-G~-~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~-~L-Pf-pd~sFDlV~~~~ 461 (595)
+.+|+=+|||. |. ++..|.. ..|+++|.++. ....+...+..+........ .+ .. .-..+|+|++..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~-----~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE-----AAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH-----HHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH-----HHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 55788898863 32 3333433 36899998754 23334455655443322111 01 11 123589988742
Q ss_pred cCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 462 CRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 462 c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
. .......+..+.+.+.|++.++...
T Consensus 114 ---~-~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 114 ---P-HHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp ---S-SHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred ---C-ChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 1 1112233445666777888887654
No 413
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=37.03 E-value=1.1e+02 Score=29.90 Aligned_cols=104 Identities=13% Similarity=-0.010 Sum_probs=54.4
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHH-HHHHHHHHHcCCCeeEeecCCCCCC-----C-----CCC
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEH-EAQVQFALERGIPAISAVMGTERLP-----F-----PGI 452 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~-~aqvq~A~ergi~~~~~v~d~~~LP-----f-----pd~ 452 (595)
.+++||=.|++.|. ++..|+++ .|+.++....... ..........+..+.+..+|..+.. + .-+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 36789999977652 44455554 5667666532111 1112223344555555555543211 0 013
Q ss_pred ceeEEEecccCccc-c----cCH--------------HHHHHHHHHhccCCcEEEEEeC
Q 007641 453 VFDAVHCARCRVPW-H----IEG--------------GKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 453 sFDlV~~~~c~v~~-h----~d~--------------~~lL~El~RvLKPGG~Lvis~p 492 (595)
..|+++.+...... . ... -.+++.+.+.|+.+|.+++...
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 57888876432111 1 111 1455667778888999887643
No 414
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=36.62 E-value=2.6e+02 Score=31.11 Aligned_cols=42 Identities=21% Similarity=0.370 Sum_probs=29.5
Q ss_pred CCCEEEEECCCCchhHHHHhhC----------CcEEEeCCchhHHHHHHHHH
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR----------GVLTMSFAPKDEHEAQVQFA 430 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r----------~V~giDisp~di~~aqvq~A 430 (595)
+...|+-||||.=.....|... .+..+|++-.++-....++.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l 158 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELI 158 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHH
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHH
Confidence 3578999999998888888553 57777777555545444443
No 415
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=36.00 E-value=87 Score=31.50 Aligned_cols=87 Identities=8% Similarity=-0.017 Sum_probs=49.0
Q ss_pred CEEEEE-CCC-CchhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----C-CCCceeEEEe
Q 007641 391 RVVLDV-GCG-VASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----F-PGIVFDAVHC 459 (595)
Q Consensus 391 ~rVLDI-GCG-tG~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----f-pd~sFDlV~~ 459 (595)
.+||=. |+| .|.++..+++ ..|++++.++.. .+++++.|....+...+ ..+. . ....||+|+-
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~-----~~~~~~~Ga~~~~~~~~-~~~~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQ-----IALLKDIGAAHVLNEKA-PDFEATLREVMKAEQPRIFLD 239 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGG-----HHHHHHHTCSEEEETTS-TTHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHcCCCEEEECCc-HHHHHHHHHHhcCCCCcEEEE
Confidence 566643 333 4445555554 278888887543 34555666554332211 1110 0 0135899886
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.-. ...+..+.++|+|||.+++..
T Consensus 240 ~~g--------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 240 AVT--------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp SSC--------HHHHHHHHHHSCTTCEEEECC
T ss_pred CCC--------ChhHHHHHhhhcCCCEEEEEe
Confidence 421 133577889999999999875
No 416
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=34.38 E-value=48 Score=28.60 Aligned_cols=80 Identities=18% Similarity=-0.004 Sum_probs=46.8
Q ss_pred CCEEEEECCCCchhHHHHhhCCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcccccC
Q 007641 390 TRVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWHIE 469 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h~d 469 (595)
..+|| +-|+.|..+..|+.+ +.+.|.++|+++.+.......+.-.-..||+|++.. -+
T Consensus 6 ~mkIl-L~C~aGmSTsllv~k---------------m~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgP-QV----- 63 (108)
T 3nbm_A 6 ELKVL-VLCAGSGTSAQLANA---------------INEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAP-QV----- 63 (108)
T ss_dssp CEEEE-EEESSSSHHHHHHHH---------------HHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECG-GG-----
T ss_pred CceEE-EECCCCCCHHHHHHH---------------HHHHHHHCCCceEEEEcchHHHHhhccCCCEEEECh-HH-----
Confidence 34666 447777666556543 456677889887664433222222224599999875 22
Q ss_pred HHHHHHHHHHhccCCcEEEEEeC
Q 007641 470 GGKLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 470 ~~~lL~El~RvLKPGG~Lvis~p 492 (595)
...+.++...+.+-|.=+...+
T Consensus 64 -~y~~~~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 64 -RSYYREMKVDAERLGIQIVATR 85 (108)
T ss_dssp -GGGHHHHHHHHTTTTCEEEECC
T ss_pred -HHHHHHHHHHhhhcCCcEEEeC
Confidence 2345566666777676555443
No 417
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=33.94 E-value=31 Score=37.08 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=26.2
Q ss_pred CCEEEEECCCCchhHHHHhhC---------CcEEEeCCchhH
Q 007641 390 TRVVLDVGCGVASFGGFLFDR---------GVLTMSFAPKDE 422 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r---------~V~giDisp~di 422 (595)
..+|+|+|+|.|.++.-+++. .+..|++|+...
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr 179 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELR 179 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHH
Confidence 368999999999988766541 488999998754
No 418
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=33.60 E-value=1.4e+02 Score=28.55 Aligned_cols=102 Identities=17% Similarity=0.109 Sum_probs=54.9
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCC------------chhHHHHHHHHHHHcCCCeeEeecCCCCCC---
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFA------------PKDEHEAQVQFALERGIPAISAVMGTERLP--- 448 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDis------------p~di~~aqvq~A~ergi~~~~~v~d~~~LP--- 448 (595)
.+++||=.|++.|. ++..|+++ .|+.++.. ...+.... ......+..+.+..+|..+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAG-LEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHH-HHHHHTTSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHH-HHHHhcCCceEEEEccCCCHHHHH
Confidence 36789999987662 44555554 67888775 22222222 122334555666666643211
Q ss_pred --CC-----CCceeEEEecccCcccc--cCH--------------HHHHHHHHHhccCCcEEEEEe
Q 007641 449 --FP-----GIVFDAVHCARCRVPWH--IEG--------------GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 449 --fp-----d~sFDlV~~~~c~v~~h--~d~--------------~~lL~El~RvLKPGG~Lvis~ 491 (595)
+. -+..|+++.+-...... ... -.+++.+.+.|+.+|.+++..
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 00 02578888764322111 111 144566777778889888764
No 419
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=33.41 E-value=97 Score=29.99 Aligned_cols=102 Identities=18% Similarity=0.073 Sum_probs=53.7
Q ss_pred CCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----C-----CCCce
Q 007641 390 TRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----F-----PGIVF 454 (595)
Q Consensus 390 ~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----f-----pd~sF 454 (595)
+++||=.|++.|. ++..|+++ .|+.++.................+..+....+|..+.. + .-+..
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 106 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGV 106 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 6789999987662 44455554 45555433322222222333344555666666643211 0 01358
Q ss_pred eEEEecccCcccc----cCH--------------HHHHHHHHHhccCCcEEEEEe
Q 007641 455 DAVHCARCRVPWH----IEG--------------GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 455 DlV~~~~c~v~~h----~d~--------------~~lL~El~RvLKPGG~Lvis~ 491 (595)
|+++.+-...... .+. -.+++.+.+.|+.+|.+++..
T Consensus 107 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 107 DVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 9888764322111 111 134566777888889888764
No 420
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=33.30 E-value=19 Score=37.53 Aligned_cols=32 Identities=19% Similarity=0.069 Sum_probs=21.7
Q ss_pred CCCEEEEECCCC-chhHHHHhh---CCcEEEeCCch
Q 007641 389 RTRVVLDVGCGV-ASFGGFLFD---RGVLTMSFAPK 420 (595)
Q Consensus 389 ~~~rVLDIGCGt-G~~a~~La~---r~V~giDisp~ 420 (595)
++.+|+=||+|. |..+..++. ..|+++|..+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 478999999984 333344443 25888898865
No 421
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=33.23 E-value=9.8 Score=39.40 Aligned_cols=95 Identities=13% Similarity=-0.039 Sum_probs=46.0
Q ss_pred CCEEEEECCCC-chhHHHHhh-C--CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCCCCCCceeEEEecccCc
Q 007641 390 TRVVLDVGCGV-ASFGGFLFD-R--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLPFPGIVFDAVHCARCRV 464 (595)
Q Consensus 390 ~~rVLDIGCGt-G~~a~~La~-r--~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LPfpd~sFDlV~~~~c~v 464 (595)
+.+||=+|+|. |..+..++. . .|+++|.++.-. +.+.+.+. .+.........+.-.-..+|+|+..- .+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~-~~ 240 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERL-----SYLETLFGSRVELLYSNSAEIETAVAEADLLIGAV-LV 240 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECC-CC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHH-----HHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECC-Cc
Confidence 47999999962 333333333 2 688888875432 22222211 11111111011100002589998642 12
Q ss_pred ccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 465 PWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 465 ~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
.....+..+..++.+.|+|||+++..
T Consensus 241 ~~~~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp TTSSCCCCBCHHHHTTSCTTCEEEET
T ss_pred CCCCCCeecCHHHHhhCCCCCEEEEE
Confidence 21111112245667889999988865
No 422
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=32.96 E-value=1.4e+02 Score=25.49 Aligned_cols=88 Identities=15% Similarity=0.114 Sum_probs=46.1
Q ss_pred CCEEEEECCCCchhHHHHhh------CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC---C-CCCCCceeEEEe
Q 007641 390 TRVVLDVGCGVASFGGFLFD------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---L-PFPGIVFDAVHC 459 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~------r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~---L-Pfpd~sFDlV~~ 459 (595)
..+|+=+||| .++..+++ ..|+++|.++. .++.+...+..+ ...+... + ...-..+|+|++
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~-----~~~~~~~~~~~~--~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKE-----KIELLEDEGFDA--VIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHH-----HHHHHHHTTCEE--EECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHH-----HHHHHHHCCCcE--EECCCCCHHHHHhCCcccCCEEEE
Confidence 3578889985 45555544 27899998754 233344455433 3333221 1 011245898887
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.. . .......+....|-+. ..+++...
T Consensus 77 ~~---~-~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 77 TG---S-DDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp CC---S-CHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred ec---C-CHHHHHHHHHHHHHhC-CceEEEEE
Confidence 53 2 1122344445555566 55555543
No 423
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=32.69 E-value=6.2e+02 Score=30.99 Aligned_cols=125 Identities=13% Similarity=0.111 Sum_probs=66.2
Q ss_pred CCCEEEEECCCCchhHHHHhhCC----cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCC-----------------CCC
Q 007641 389 RTRVVLDVGCGVASFGGFLFDRG----VLTMSFAPKDEHEAQVQFALERGIPAISAVMGT-----------------ERL 447 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r~----V~giDisp~di~~aqvq~A~ergi~~~~~v~d~-----------------~~L 447 (595)
...+|||+-||.|.+..-|.+++ |.++|+++..... +..... ...++..+. ..+
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~t----y~~N~p-~~~~~~~DI~~l~~~~~~gdi~~~~~~~l 924 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQA----FRLNNP-GTTVFTEDCNVLLKLVMAGEVTNSLGQRL 924 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHH----HHHHCT-TSEEECSCHHHHHHHHTTTCSBCSSCCBC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHH----HHHhCC-CCcEeeccHHHHhHhhhccchhhhhhhhc
Confidence 35689999999999988887764 4688888653322 222221 112221111 123
Q ss_pred CCCCCceeEEEecccCccccc-C---H-------HHHHH---HHHHhccCCcEEEEE-eCCCCCcCchhHHHHHHHHHHH
Q 007641 448 PFPGIVFDAVHCARCRVPWHI-E---G-------GKLLL---ELNRVLRPGGFFIWS-ATPVYQKLPEDVEIWNAMSQLI 512 (595)
Q Consensus 448 Pfpd~sFDlV~~~~c~v~~h~-d---~-------~~lL~---El~RvLKPGG~Lvis-~pp~~~~l~e~i~~w~~le~La 512 (595)
|. .+.+|+|+....--.+.. . . ..++. .+.+.++|- +|++- ++.+.... ....+..+...+
T Consensus 925 p~-~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk-~fv~ENV~glls~~--~g~~~~~il~~L 1000 (1330)
T 3av4_A 925 PQ-KGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR-FFLLENVRNFVSYR--RSMVLKLTLRCL 1000 (1330)
T ss_dssp CC-TTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCS-EEEEEEEGGGGTTT--TTHHHHHHHHHH
T ss_pred cc-cCccceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCc-EEEEeccHHHhccC--ccHHHHHHHHHH
Confidence 32 246899997651111111 1 0 12333 344556786 34433 33222211 123567777888
Q ss_pred HHcCCEEEEE
Q 007641 513 KAMCWELVSI 522 (595)
Q Consensus 513 k~~Gw~~v~~ 522 (595)
..+||.+...
T Consensus 1001 ~~lGY~v~~~ 1010 (1330)
T 3av4_A 1001 VRMGYQCTFG 1010 (1330)
T ss_dssp HHHTCEEEEE
T ss_pred HhcCCeeeEE
Confidence 8899987554
No 424
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=32.62 E-value=1.9e+02 Score=27.33 Aligned_cols=103 Identities=10% Similarity=0.049 Sum_probs=54.9
Q ss_pred CCCEEEEECCC--Cch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCC-CeeEeecCCCCCC-----CC-----
Q 007641 389 RTRVVLDVGCG--VAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGI-PAISAVMGTERLP-----FP----- 450 (595)
Q Consensus 389 ~~~rVLDIGCG--tG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi-~~~~~v~d~~~LP-----fp----- 450 (595)
.+++||=.|++ .|. ++..|+++ .|+.++...... ....+.....+. .+.+..+|..+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE-KSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH-HHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 46789999986 442 55556554 677777764332 222233333332 4555666643321 00
Q ss_pred CCceeEEEecccCcc--------cccCHH--------------HHHHHHHHhccCCcEEEEEeC
Q 007641 451 GIVFDAVHCARCRVP--------WHIEGG--------------KLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 451 d~sFDlV~~~~c~v~--------~h~d~~--------------~lL~El~RvLKPGG~Lvis~p 492 (595)
-+.+|+++.+..... ...+.. .+++.+...|+++|.+++...
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 025788876542221 011111 345667777888999887753
No 425
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=31.21 E-value=1.4e+02 Score=28.92 Aligned_cols=103 Identities=19% Similarity=0.129 Sum_probs=51.9
Q ss_pred CCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----CC-----CCce
Q 007641 390 TRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----FP-----GIVF 454 (595)
Q Consensus 390 ~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----fp-----d~sF 454 (595)
+++||=.|++.|. ++..|+++ .|++++...........+.....+..+.+..+|..... +. -+.+
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 108 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKL 108 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5788888876552 33444443 57777766432212222222334555555555532210 00 0357
Q ss_pred eEEEecccCcccc----cCHH--------------HHHHHHHHhccCCcEEEEEeC
Q 007641 455 DAVHCARCRVPWH----IEGG--------------KLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 455 DlV~~~~c~v~~h----~d~~--------------~lL~El~RvLKPGG~Lvis~p 492 (595)
|+++.+-...... .... .+++.+.+.|+.+|.+++...
T Consensus 109 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 8888754322111 1111 345666677777888887643
No 426
>3s8f_C Cytochrome C oxidase polypeptide 2A; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 2qpd_C* 2qpe_C* 3bvd_C* 3qjq_C* 3qjr_C* 3qjs_C* 3qjt_C* 3qju_C* 3qjv_C* 1xme_C* 3s8g_C* 4esl_C* 4ev3_C* 4f05_C* 4fa7_C* 4faa_C* 1ehk_C* 3eh3_C* 3eh4_C* 3eh5_C* ...
Probab=31.05 E-value=21 Score=24.93 Aligned_cols=20 Identities=10% Similarity=0.478 Sum_probs=17.0
Q ss_pred ceehhhhHHHHHHHHHHhhh
Q 007641 20 STVTITVFVALCLVGVWMMT 39 (595)
Q Consensus 20 ~~~~~~~~~~~~~~g~w~~~ 39 (595)
-|.+.|.+|++.++..|..+
T Consensus 7 GTl~~V~ilg~~I~i~W~~v 26 (34)
T 3s8f_C 7 GALAVILVLTLTILVFWLGV 26 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred ceehHHHHHHHHHHHHHHHH
Confidence 47888999999999999764
No 427
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=30.83 E-value=97 Score=29.66 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=53.2
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----C-----CCCc
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----F-----PGIV 453 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----f-----pd~s 453 (595)
.+++||=.|++.|. ++..|+++ .|+.++.++..+.. .+.+.+..+....+|..+.. + .-+.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIAR----IREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 36789999987662 44455554 67888877543322 22222334555555543211 0 0135
Q ss_pred eeEEEecccCcccc----cCHH--------------HHHHHHHHhccCCcEEEEEe
Q 007641 454 FDAVHCARCRVPWH----IEGG--------------KLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 454 FDlV~~~~c~v~~h----~d~~--------------~lL~El~RvLKPGG~Lvis~ 491 (595)
+|+++.+-...... .... .+++.+.+.|+.+|.++...
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 89888754222111 1111 34556667777889888764
No 428
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=30.72 E-value=27 Score=37.21 Aligned_cols=96 Identities=14% Similarity=0.082 Sum_probs=50.8
Q ss_pred CCCEEEEECCCC-chhHHHHhh---CCcEEEeCCchhHHHHHHHHHHHcCCCeeEee----cC-------CCCCC-----
Q 007641 389 RTRVVLDVGCGV-ASFGGFLFD---RGVLTMSFAPKDEHEAQVQFALERGIPAISAV----MG-------TERLP----- 448 (595)
Q Consensus 389 ~~~rVLDIGCGt-G~~a~~La~---r~V~giDisp~di~~aqvq~A~ergi~~~~~v----~d-------~~~LP----- 448 (595)
++.+|+=||+|. |..+..++. ..|+++|..+.. .+.+...|....... .+ ...++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~-----l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAA-----KEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTH-----HHHHHHTTCEECCCCC-----------------CHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHH-----HHHHHHcCCceeecccccccccccccchhhhcchhhhh
Confidence 468999999984 444444444 378999998653 233334443211110 00 00010
Q ss_pred -----CC--CCceeEEEecccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 449 -----FP--GIVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 449 -----fp--d~sFDlV~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
+. -...|+|+..- +++-...+..+-+++.+.+|||.+++=.
T Consensus 264 ~~~~~l~e~l~~aDVVI~tv-lipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 264 KQAALVAEHIAKQDIVITTA-LIPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHHHHHTCSEEEECC-CCSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred hhHhHHHHHhcCCCEEEECC-cCCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 00 03579998642 1222122333457889999999988744
No 429
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=30.02 E-value=32 Score=35.31 Aligned_cols=40 Identities=18% Similarity=0.116 Sum_probs=27.5
Q ss_pred CceeEEEecc--cCcccc----cCH----HHHHHHHHHhccCCcEEEEEe
Q 007641 452 IVFDAVHCAR--CRVPWH----IEG----GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 452 ~sFDlV~~~~--c~v~~h----~d~----~~lL~El~RvLKPGG~Lvis~ 491 (595)
+.+|+|++.. .+-.+| .|. ..++.-+.++|+|||.|++-.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kv 254 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIG 254 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 6799999864 122223 122 246667889999999999875
No 430
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=29.54 E-value=2.5e+02 Score=28.99 Aligned_cols=65 Identities=17% Similarity=0.176 Sum_probs=33.3
Q ss_pred CCCEEEEECCCCchhHHH-HhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEec
Q 007641 389 RTRVVLDVGCGVASFGGF-LFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCA 460 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~-La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~ 460 (595)
+..||.=||+|.|.+-.. +++. .+-.+-+...+...+ .++|.+.|++. ..+...|. ...|+|+..
T Consensus 6 ~~~rv~VvG~G~g~~h~~a~~~~~~~~elvav~~~~~~~a-~~~a~~~gv~~---~~~~~~l~---~~~D~v~i~ 73 (372)
T 4gmf_A 6 PKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARS-RELAHAFGIPL---YTSPEQIT---GMPDIACIV 73 (372)
T ss_dssp -CEEEEEECSTTTHHHHHTTSSCCTTEEEEEEECCSSHHH-HHHHHHTTCCE---ESSGGGCC---SCCSEEEEC
T ss_pred CCCEEEEEehHHHHHHHHHHHhCCCCeEEEEEECCCHHHH-HHHHHHhCCCE---ECCHHHHh---cCCCEEEEE
Confidence 356888899998764322 2222 232222222222233 36777888763 23444453 236877653
No 431
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=29.24 E-value=13 Score=39.35 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=22.1
Q ss_pred CCCEEEEECCCC-chhHHHHhh---CCcEEEeCCchh
Q 007641 389 RTRVVLDVGCGV-ASFGGFLFD---RGVLTMSFAPKD 421 (595)
Q Consensus 389 ~~~rVLDIGCGt-G~~a~~La~---r~V~giDisp~d 421 (595)
++.+|+=||+|. |..+..++. ..|+++|..+.-
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~ 207 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEV 207 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 478999999984 333344443 268889988653
No 432
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=29.00 E-value=37 Score=34.36 Aligned_cols=68 Identities=16% Similarity=0.005 Sum_probs=41.8
Q ss_pred CCCEEEEECCCCchhHHHHhhC--C---cEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC---CC-CCceeEEEe
Q 007641 389 RTRVVLDVGCGVASFGGFLFDR--G---VLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP---FP-GIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~r--~---V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP---fp-d~sFDlV~~ 459 (595)
...+|||+-||.|.+...|.++ . |.++|+++...... .... ........|...+. ++ ...+|+|+.
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty----~~N~-~~~~~~~~DI~~i~~~~i~~~~~~Dll~g 89 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVG----MVRH-QGKIMYVGDVRSVTQKHIQEWGPFDLVIG 89 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHH----HHHT-TTCEEEECCGGGCCHHHHHHTCCCSEEEE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHH----HHhC-CCCceeCCChHHccHHHhcccCCcCEEEe
Confidence 4668999999999988888775 2 47888886532221 1111 12234455554442 11 135999997
Q ss_pred cc
Q 007641 460 AR 461 (595)
Q Consensus 460 ~~ 461 (595)
..
T Consensus 90 gp 91 (295)
T 2qrv_A 90 GS 91 (295)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 433
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=28.88 E-value=34 Score=29.29 Aligned_cols=54 Identities=13% Similarity=0.006 Sum_probs=34.8
Q ss_pred EEEEECCCCchhHHHHhhCCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecc
Q 007641 392 VVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 392 rVLDIGCGtG~~a~~La~r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
+|| +-||.|.-+..|++ .+.+.+.++|+++.+...+...+.-....||+|++..
T Consensus 5 kIl-l~Cg~G~sTS~l~~---------------k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~p 58 (106)
T 1e2b_A 5 HIY-LFSSAGMSTSLLVS---------------KMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGP 58 (106)
T ss_dssp EEE-EECSSSTTTHHHHH---------------HHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECT
T ss_pred EEE-EECCCchhHHHHHH---------------HHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEcc
Confidence 466 66888865544433 3456778889988776666554432124589998865
No 434
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=28.67 E-value=3.5e+02 Score=24.86 Aligned_cols=66 Identities=24% Similarity=0.223 Sum_probs=34.6
Q ss_pred CCCEEEEECCCCchhHHHHhh----C--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCC-CCCCCCCceeEEEecc
Q 007641 389 RTRVVLDVGCGVASFGGFLFD----R--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTE-RLPFPGIVFDAVHCAR 461 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~----r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~-~LPfpd~sFDlV~~~~ 461 (595)
.+++||=+|+ +|.++.+|++ + .|++++..+..... ....++. .+...|.. .+.-.-..+|+|+...
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-----~~~~~~~-~~~~~Dl~~~~~~~~~~~D~vi~~a 92 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPE-----LRERGAS-DIVVANLEEDFSHAFASIDAVVFAA 92 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-----HHHTTCS-EEEECCTTSCCGGGGTTCSEEEECC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHH-----HHhCCCc-eEEEcccHHHHHHHHcCCCEEEECC
Confidence 3678998885 4555555544 3 68888887654321 1222330 33444432 2211113589988764
No 435
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=28.35 E-value=2.2e+02 Score=28.44 Aligned_cols=88 Identities=19% Similarity=0.204 Sum_probs=50.1
Q ss_pred CCEEEEECCCC--chhHHHHhhC----CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccC
Q 007641 390 TRVVLDVGCGV--ASFGGFLFDR----GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 390 ~~rVLDIGCGt--G~~a~~La~r----~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
..+|.=||+|. +.++..|+.. .|+++|.++. .++.+.+.|+... ...+...+ .-...|+|+..-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~-----~~~~a~~~G~~~~-~~~~~~~~--~~~~aDvVilav-- 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE-----SISKAVDLGIIDE-GTTSIAKV--EDFSPDFVMLSS-- 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH-----HHHHHHHTTSCSE-EESCTTGG--GGGCCSEEEECS--
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHCCCcch-hcCCHHHH--hhccCCEEEEeC--
Confidence 46899999873 2355555554 4778888753 3344555554211 11112210 013479988742
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEE
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIW 489 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvi 489 (595)
+.. ....++.++...|+||.+++-
T Consensus 103 -p~~-~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 103 -PVR-TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp -CGG-GHHHHHHHHHHHSCTTCEEEE
T ss_pred -CHH-HHHHHHHHHhhccCCCcEEEE
Confidence 211 346788889999999876653
No 436
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=27.18 E-value=1.4e+02 Score=27.91 Aligned_cols=101 Identities=14% Similarity=0.012 Sum_probs=51.1
Q ss_pred CCEEEEECCCCc---hhHHHHhh-C--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----CC-----CCc
Q 007641 390 TRVVLDVGCGVA---SFGGFLFD-R--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----FP-----GIV 453 (595)
Q Consensus 390 ~~rVLDIGCGtG---~~a~~La~-r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----fp-----d~s 453 (595)
+++||=.|+..| .++..|++ + .|++++..+......... ....+..+.+..+|..+.. +. -+.
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQ-LQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHH-HHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHH-HHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 578888885543 13344555 3 577777765433322222 2223444555555543211 00 025
Q ss_pred eeEEEecccCcccc---cC-H--------------HHHHHHHHHhccCCcEEEEEe
Q 007641 454 FDAVHCARCRVPWH---IE-G--------------GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 454 FDlV~~~~c~v~~h---~d-~--------------~~lL~El~RvLKPGG~Lvis~ 491 (595)
+|+|+.+-...... .. . ..+++.+.+.|+++|.|++..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 89888653222110 00 0 134555667777788888764
No 437
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=26.90 E-value=94 Score=29.87 Aligned_cols=30 Identities=13% Similarity=0.140 Sum_probs=20.5
Q ss_pred CCEEEEECC-CCchhHHHHhh----C--CcEEEeCCc
Q 007641 390 TRVVLDVGC-GVASFGGFLFD----R--GVLTMSFAP 419 (595)
Q Consensus 390 ~~rVLDIGC-GtG~~a~~La~----r--~V~giDisp 419 (595)
+++||=.|+ |+|.++..++. + .|+.++.+.
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 678999998 36656655554 3 677777765
No 438
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=26.22 E-value=1.4e+02 Score=28.44 Aligned_cols=102 Identities=11% Similarity=0.002 Sum_probs=52.1
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEE-eCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----CC-----CC
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTM-SFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----FP-----GI 452 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~gi-Disp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----fp-----d~ 452 (595)
.+++||=.|++.|. ++..|+++ .|+.+ +......... .......+..+.+..+|..+.. +. -+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATA-VAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHH-HHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 36789999987662 44555554 55555 4443322222 2222333545566666643211 00 03
Q ss_pred ceeEEEecccCc-cc----ccCH--------------HHHHHHHHHhccCCcEEEEEe
Q 007641 453 VFDAVHCARCRV-PW----HIEG--------------GKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 453 sFDlV~~~~c~v-~~----h~d~--------------~~lL~El~RvLKPGG~Lvis~ 491 (595)
..|+++.+-... .. ..+. -.+++.+.+.|+.+|.+++..
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 578888654222 11 1111 134556667777788888764
No 439
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=25.80 E-value=1e+02 Score=29.03 Aligned_cols=102 Identities=18% Similarity=0.040 Sum_probs=49.3
Q ss_pred CCEEEEECCCCch---hHHHHhhC--CcEEEe-CCchhHHHHHHHHHHHcCCCeeEeecCCCCCC---------------
Q 007641 390 TRVVLDVGCGVAS---FGGFLFDR--GVLTMS-FAPKDEHEAQVQFALERGIPAISAVMGTERLP--------------- 448 (595)
Q Consensus 390 ~~rVLDIGCGtG~---~a~~La~r--~V~giD-isp~di~~aqvq~A~ergi~~~~~v~d~~~LP--------------- 448 (595)
+++||=.|++.|. ++..|+++ .|+.++ ...... ..........+..+.....|.....
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA-EETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHH-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHH-HHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 6789988887662 44455554 454443 333222 2222222333444444445433211
Q ss_pred -CCCCceeEEEecccCcccc----cCHH--------------HHHHHHHHhccCCcEEEEEeC
Q 007641 449 -FPGIVFDAVHCARCRVPWH----IEGG--------------KLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 449 -fpd~sFDlV~~~~c~v~~h----~d~~--------------~lL~El~RvLKPGG~Lvis~p 492 (595)
+..+..|+++.+-...... .... .+++.+.+.|+++|.+++...
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS 148 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISS 148 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 0012489888764322111 1111 344455566677888887643
No 440
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=25.61 E-value=1.3e+02 Score=25.73 Aligned_cols=56 Identities=14% Similarity=0.114 Sum_probs=32.1
Q ss_pred CEEEEECCCCchhHHHHhhCCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecc
Q 007641 391 RVVLDVGCGVASFGGFLFDRGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCAR 461 (595)
Q Consensus 391 ~rVLDIGCGtG~~a~~La~r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~ 461 (595)
.+|| +-||+|.-+..|+. ....+.+.+.++.+.+...+...++.....+|+|++..
T Consensus 22 kkIl-vvC~sG~gTS~ll~--------------~kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist~ 77 (113)
T 1tvm_A 22 RKII-VACGGAVATSTMAA--------------EEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTA 77 (113)
T ss_dssp EEEE-EESCSCSSHHHHHH--------------HHHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEESS
T ss_pred cEEE-EECCCCHHHHHHHH--------------HHHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEECC
Confidence 3566 55888865555433 12234556677776555555544443224589988864
No 441
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=25.34 E-value=2.8e+02 Score=29.76 Aligned_cols=127 Identities=8% Similarity=-0.008 Sum_probs=70.7
Q ss_pred CCCEEEEECCCC--chhHHHHhhC--CcEEEeCCchhHHHHH----HHHHHHcCC-C---------eeEeecCCCCCCCC
Q 007641 389 RTRVVLDVGCGV--ASFGGFLFDR--GVLTMSFAPKDEHEAQ----VQFALERGI-P---------AISAVMGTERLPFP 450 (595)
Q Consensus 389 ~~~rVLDIGCGt--G~~a~~La~r--~V~giDisp~di~~aq----vq~A~ergi-~---------~~~~v~d~~~LPfp 450 (595)
+..+|.=||+|+ +.++..|+.. .|+.+|+++... ... +..+.++|. . .+....+... +
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a-~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~a--l- 128 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRC-KQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHK--L- 128 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGG--C-
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHH-HHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHH--H-
Confidence 346788899985 3456666664 788999987511 111 112223332 1 1122222221 2
Q ss_pred CCceeEEEecccCcccccCH-HHHHHHHHHhccCCcEEEEEeCCC--------------------CCc------------
Q 007641 451 GIVFDAVHCARCRVPWHIEG-GKLLLELNRVLRPGGFFIWSATPV--------------------YQK------------ 497 (595)
Q Consensus 451 d~sFDlV~~~~c~v~~h~d~-~~lL~El~RvLKPGG~Lvis~pp~--------------------~~~------------ 497 (595)
...|+|+.. ++...+. ..++.++..+++|+.+|+.....+ +..
T Consensus 129 -~~aDlVIeA---Vpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g 204 (460)
T 3k6j_A 129 -SNCDLIVES---VIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYG 204 (460)
T ss_dssp -TTCSEEEEC---CCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECC
T ss_pred -ccCCEEEEc---CCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCCEEEEEeC
Confidence 347999874 3433332 578899999999998776431100 000
Q ss_pred CchhHHHHHHHHHHHHHcCCEEEEEe
Q 007641 498 LPEDVEIWNAMSQLIKAMCWELVSIS 523 (595)
Q Consensus 498 l~e~i~~w~~le~Lak~~Gw~~v~~~ 523 (595)
..-+.+....+..+++.+|-..+...
T Consensus 205 ~~Ts~e~~~~~~~l~~~lGk~~v~v~ 230 (460)
T 3k6j_A 205 SHTSSQAIATAFQACESIKKLPVLVG 230 (460)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 00123456778888888998777664
No 442
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=25.21 E-value=2.3e+02 Score=23.50 Aligned_cols=88 Identities=17% Similarity=0.153 Sum_probs=43.7
Q ss_pred CCEEEEECCCCchhHHHHhh------CCcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCC---C-CCCCCceeEEEe
Q 007641 390 TRVVLDVGCGVASFGGFLFD------RGVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTER---L-PFPGIVFDAVHC 459 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~------r~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~---L-Pfpd~sFDlV~~ 459 (595)
..+|+=+|+ |.++..++. ..|+++|.++. ..+.+...+. .....+... + ...-..+|+|+.
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~-----~~~~~~~~~~--~~~~~d~~~~~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEE-----KVNAYASYAT--HAVIANATEENELLSLGIRNFEYVIV 76 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHH-----HHHTTTTTCS--EEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHhCC--EEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence 456888997 555555544 26888888643 2222222333 222233211 1 011245899887
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
.. .........+..+.+.+.|. .++..
T Consensus 77 ~~---~~~~~~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 77 AI---GANIQASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp CC---CSCHHHHHHHHHHHHHTTCS-EEEEE
T ss_pred CC---CCchHHHHHHHHHHHHcCCC-eEEEE
Confidence 53 11112233455556667776 65554
No 443
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=24.77 E-value=2.5e+02 Score=29.75 Aligned_cols=93 Identities=22% Similarity=0.218 Sum_probs=52.5
Q ss_pred CCEEEEECCCC-c-hhHHHHhhC--CcEEEeCCchhHHHHHHHHH------HHcCC-------Ce-eEeecCCCCCCCCC
Q 007641 390 TRVVLDVGCGV-A-SFGGFLFDR--GVLTMSFAPKDEHEAQVQFA------LERGI-------PA-ISAVMGTERLPFPG 451 (595)
Q Consensus 390 ~~rVLDIGCGt-G-~~a~~La~r--~V~giDisp~di~~aqvq~A------~ergi-------~~-~~~v~d~~~LPfpd 451 (595)
..+|.=||+|. | .++..|+.+ .|+.+|+++..+..+...+. ..++. .. .....+...+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~---- 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL---- 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGG----
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHH----
Confidence 46799999985 3 355566654 68889998765544432111 01110 00 1111111111
Q ss_pred CceeEEEecccCcccccC-HHHHHHHHHHhccCCcEEEE
Q 007641 452 IVFDAVHCARCRVPWHIE-GGKLLLELNRVLRPGGFFIW 489 (595)
Q Consensus 452 ~sFDlV~~~~c~v~~h~d-~~~lL~El~RvLKPGG~Lvi 489 (595)
...|+|+.. ++...+ ...++.++..+++||.+|+.
T Consensus 113 ~~aDlVIea---Vpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 STVDLVVEA---VFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TTCSEEEEC---CCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEEc---CCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 347999874 333322 25788889999999877664
No 444
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=24.55 E-value=1.3e+02 Score=26.04 Aligned_cols=84 Identities=19% Similarity=0.136 Sum_probs=43.4
Q ss_pred CCEEEEECCCCchhHHHHhhC------CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccC
Q 007641 390 TRVVLDVGCGVASFGGFLFDR------GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCR 463 (595)
Q Consensus 390 ~~rVLDIGCGtG~~a~~La~r------~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~ 463 (595)
+.+|+=||| |.++..++.. .|+.++.++.. + ..++.+.+.... ...+...+ + ..+|+|++.-..
T Consensus 21 ~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~---~-~~~a~~~~~~~~-~~~~~~~~-~--~~~Divi~at~~ 90 (144)
T 3oj0_A 21 GNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDH---V-RAFAEKYEYEYV-LINDIDSL-I--KNNDVIITATSS 90 (144)
T ss_dssp CCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHH---H-HHHHHHHTCEEE-ECSCHHHH-H--HTCSEEEECSCC
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHH---H-HHHHHHhCCceE-eecCHHHH-h--cCCCEEEEeCCC
Confidence 678999998 4566666552 36677776432 1 234555553221 11111111 0 247999875321
Q ss_pred cccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 464 VPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 464 v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.... + ....|+||+.++-..
T Consensus 91 -~~~~-----~--~~~~l~~g~~vid~~ 110 (144)
T 3oj0_A 91 -KTPI-----V--EERSLMPGKLFIDLG 110 (144)
T ss_dssp -SSCS-----B--CGGGCCTTCEEEECC
T ss_pred -CCcE-----e--eHHHcCCCCEEEEcc
Confidence 1111 1 125678888777553
No 445
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=24.49 E-value=1.7e+02 Score=28.05 Aligned_cols=31 Identities=13% Similarity=-0.017 Sum_probs=20.3
Q ss_pred CCEEEEECCC-CchhHHHHhh----C--CcEEEeCCch
Q 007641 390 TRVVLDVGCG-VASFGGFLFD----R--GVLTMSFAPK 420 (595)
Q Consensus 390 ~~rVLDIGCG-tG~~a~~La~----r--~V~giDisp~ 420 (595)
+++||=.|++ .|.++..++. + .|+.++.++.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5789999986 2445544444 3 6778877654
No 446
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=23.76 E-value=2.6e+02 Score=27.44 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=56.6
Q ss_pred CCEEEEECCCC-c-hhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcc
Q 007641 390 TRVVLDVGCGV-A-SFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVP 465 (595)
Q Consensus 390 ~~rVLDIGCGt-G-~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~ 465 (595)
..+|.=||+|. | .++..|++. .|+++|.++. .++...+.|... ...+...+- ...|+|+.. ++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~-----~~~~~~~~g~~~--~~~~~~e~~---~~aDvvi~~---vp 73 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ-----ACANLLAEGACG--AAASAREFA---GVVDALVIL---VV 73 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH-----HHHHHHHTTCSE--EESSSTTTT---TTCSEEEEC---CS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH-----HHHHHHHcCCcc--ccCCHHHHH---hcCCEEEEE---CC
Confidence 45788898873 2 244444444 6888888753 223333445422 122222221 346999874 23
Q ss_pred cccCHHHHH---HHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEE
Q 007641 466 WHIEGGKLL---LELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELV 520 (595)
Q Consensus 466 ~h~d~~~lL---~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v 520 (595)
.......++ ..+...|+||..++-..+. .+..-..+...+...|...+
T Consensus 74 ~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~-------~~~~~~~~~~~~~~~g~~~~ 124 (303)
T 3g0o_A 74 NAAQVRQVLFGEDGVAHLMKPGSAVMVSSTI-------SSADAQEIAAALTALNLNML 124 (303)
T ss_dssp SHHHHHHHHC--CCCGGGSCTTCEEEECSCC-------CHHHHHHHHHHHHTTTCEEE
T ss_pred CHHHHHHHHhChhhHHhhCCCCCEEEecCCC-------CHHHHHHHHHHHHHcCCeEE
Confidence 211223444 5566788888777644321 11223455555565665433
No 447
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=23.53 E-value=2.7e+02 Score=26.10 Aligned_cols=102 Identities=12% Similarity=-0.005 Sum_probs=52.9
Q ss_pred CCCEEEEECCC-CchhHH----HHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----C-----CC
Q 007641 389 RTRVVLDVGCG-VASFGG----FLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLP-----F-----PG 451 (595)
Q Consensus 389 ~~~rVLDIGCG-tG~~a~----~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----f-----pd 451 (595)
.+++||=.|++ +|.++. .|+++ .|+.++...... ....+.+...+ .+.++.+|..+.. + .-
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFG-SELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 57899999975 244444 44443 677777764432 22223333333 3445555533211 0 01
Q ss_pred CceeEEEecccCccc--------c-cCHH--------------HHHHHHHHhccCCcEEEEEeC
Q 007641 452 IVFDAVHCARCRVPW--------H-IEGG--------------KLLLELNRVLRPGGFFIWSAT 492 (595)
Q Consensus 452 ~sFDlV~~~~c~v~~--------h-~d~~--------------~lL~El~RvLKPGG~Lvis~p 492 (595)
+..|+++.+-..... . .... .+++.+.+.|+++|.+++...
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 358998876432211 0 1111 345566677777888877643
No 448
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=23.38 E-value=1.7e+02 Score=30.61 Aligned_cols=29 Identities=21% Similarity=0.308 Sum_probs=19.2
Q ss_pred EEEEECCCC-ch-hHHHHhhC--CcEEEeCCch
Q 007641 392 VVLDVGCGV-AS-FGGFLFDR--GVLTMSFAPK 420 (595)
Q Consensus 392 rVLDIGCGt-G~-~a~~La~r--~V~giDisp~ 420 (595)
+|.=||+|. |. ++..|++. .|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 567788873 33 45555554 6899998754
No 449
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=22.03 E-value=2.5e+02 Score=26.98 Aligned_cols=91 Identities=11% Similarity=0.161 Sum_probs=47.2
Q ss_pred CEEEEECCCC-c-hhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEe---------ecCCCCCCCCCCceeEE
Q 007641 391 RVVLDVGCGV-A-SFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISA---------VMGTERLPFPGIVFDAV 457 (595)
Q Consensus 391 ~rVLDIGCGt-G-~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~---------v~d~~~LPfpd~sFDlV 457 (595)
.+|+=||+|. | .++..|++. .|+.++.++.. .+...+.++..... ......+.-.-..+|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 78 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAH-----IEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLI 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-----HHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHH-----HHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEE
Confidence 4688899873 3 244555554 67888876432 22333334322110 00111111000258999
Q ss_pred EecccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 458 HCARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 458 ~~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
+..- ... ....++..+...|+|+..++..
T Consensus 79 i~~v---~~~-~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 79 IALT---KAQ-QLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp EECS---CHH-HHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEEe---ccc-cHHHHHHHHHHhcCCCCEEEEe
Confidence 8742 211 3467778888888887766544
No 450
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=21.73 E-value=3e+02 Score=26.28 Aligned_cols=83 Identities=22% Similarity=0.134 Sum_probs=45.5
Q ss_pred EEEEECCCC-c-hhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCCCCCCCceeEEEecccCcccc
Q 007641 392 VVLDVGCGV-A-SFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERLPFPGIVFDAVHCARCRVPWH 467 (595)
Q Consensus 392 rVLDIGCGt-G-~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~LPfpd~sFDlV~~~~c~v~~h 467 (595)
+|.=||||. | .++..|+.. .|+++|.++.. .+.+.+.++... ...+...+ ...|+|+..- +..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~-----~~~~~~~g~~~~-~~~~~~~~----~~~D~vi~av---~~~ 68 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQST-----CEKAVERQLVDE-AGQDLSLL----QTAKIIFLCT---PIQ 68 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-----HHHHHHTTSCSE-EESCGGGG----TTCSEEEECS---CHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHhCCCCcc-ccCCHHHh----CCCCEEEEEC---CHH
Confidence 577788873 2 244444443 57788776432 223334454321 11222222 3579998742 211
Q ss_pred cCHHHHHHHHHHhccCCcEEE
Q 007641 468 IEGGKLLLELNRVLRPGGFFI 488 (595)
Q Consensus 468 ~d~~~lL~El~RvLKPGG~Lv 488 (595)
....++.++...|+||..++
T Consensus 69 -~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 69 -LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp -HHHHHHHHHGGGSCTTCEEE
T ss_pred -HHHHHHHHHHhhCCCCCEEE
Confidence 23577788888888887654
No 451
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=21.65 E-value=5.4e+02 Score=24.65 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=20.7
Q ss_pred CCCEEEEECCCCchhHHHHhh----C--CcEEEeCCch
Q 007641 389 RTRVVLDVGCGVASFGGFLFD----R--GVLTMSFAPK 420 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~----r--~V~giDisp~ 420 (595)
.+++||=+|+ +|.++.+|+. + .|++++.++.
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~ 46 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSAS 46 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3678998885 4666665544 3 6788887654
No 452
>1spf_A Pulmonary surfactant-associated polypeptide C; lipoprotein(surface FILM); NMR {Sus scrofa} SCOP: j.35.1.1
Probab=21.60 E-value=46 Score=22.98 Aligned_cols=17 Identities=35% Similarity=0.716 Sum_probs=12.6
Q ss_pred ehhhhHHHHHHHHHHhh
Q 007641 22 VTITVFVALCLVGVWMM 38 (595)
Q Consensus 22 ~~~~~~~~~~~~g~w~~ 38 (595)
+.+||.|-+-+||+-.|
T Consensus 17 VvVvVlvVvVivGaLLm 33 (35)
T 1spf_A 17 VVVVVLVVVVIVGALLM 33 (35)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred EeeehhhHHHHHHHHHc
Confidence 34566777888999877
No 453
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=21.34 E-value=3e+02 Score=23.07 Aligned_cols=48 Identities=10% Similarity=0.050 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHhccCCcEEEEEeCCCCCcCchhHHHHHHHHHHHHHcCCEEEEEee
Q 007641 469 EGGKLLLELNRVLRPGGFFIWSATPVYQKLPEDVEIWNAMSQLIKAMCWELVSISK 524 (595)
Q Consensus 469 d~~~lL~El~RvLKPGG~Lvis~pp~~~~l~e~i~~w~~le~Lak~~Gw~~v~~~~ 524 (595)
-+-..+++..+-|.+|..|.|.... ......+..+++..|+.++....
T Consensus 38 ~Pvl~tkkaL~~l~~Ge~L~Vl~dd--------~~a~~dI~~~~~~~G~~v~~~e~ 85 (98)
T 1jdq_A 38 VPDVETKRALQNMKPGEILEVWIDY--------PMSKERIPETVKKLGHEVLEIEE 85 (98)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEESS--------CTHHHHHHHHHHHSSCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEEECC--------ccHHHHHHHHHHHCCCEEEEEEE
Confidence 4455566677789999988776531 23457888999999999887654
No 454
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=21.21 E-value=54 Score=28.90 Aligned_cols=92 Identities=13% Similarity=0.001 Sum_probs=45.2
Q ss_pred CCCEEEEECCCC-ch-hHHHHhhC--CcEEEeCCchhHHHHHHHHHH-HcCCCeeEeecCCCC---CC-CCCCceeEEEe
Q 007641 389 RTRVVLDVGCGV-AS-FGGFLFDR--GVLTMSFAPKDEHEAQVQFAL-ERGIPAISAVMGTER---LP-FPGIVFDAVHC 459 (595)
Q Consensus 389 ~~~rVLDIGCGt-G~-~a~~La~r--~V~giDisp~di~~aqvq~A~-ergi~~~~~v~d~~~---LP-fpd~sFDlV~~ 459 (595)
.+.+||=+|||. |. ++..|... .|+++|.++..+ +.+. ..+.. ....+... +. ..-..+|+|+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~-----~~~~~~~g~~--~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAF-----HRLNSEFSGF--TVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGG-----GGSCTTCCSE--EEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH-----HHHHhcCCCc--EEEecCCCHHHHHHcCcccCCEEEE
Confidence 467899999863 32 22333333 688888876422 1122 22332 22222211 10 11235899887
Q ss_pred cccCcccccCHHHHHHHHHHhccCCcEEEEEe
Q 007641 460 ARCRVPWHIEGGKLLLELNRVLRPGGFFIWSA 491 (595)
Q Consensus 460 ~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis~ 491 (595)
.- . .......+..+.+.+.|...++...
T Consensus 91 ~~---~-~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 91 FT---N-DDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp CS---S-CHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred Ee---C-CcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 43 1 1122344455566666666666553
No 455
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=20.95 E-value=3.6e+02 Score=26.31 Aligned_cols=70 Identities=14% Similarity=0.105 Sum_probs=45.2
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeEeecCCCCC-----CCCCCceeEEE
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTERL-----PFPGIVFDAVH 458 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~~v~d~~~L-----Pfpd~sFDlV~ 458 (595)
.++++|=.|.+.|. ++..|++. .|+..+.... ....+...+.+..+....+|..+. -+..+.+|+++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~---~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP---DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC---HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH---HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 47899999988873 55666664 6888887653 223344556677777777663221 13446799998
Q ss_pred ecc
Q 007641 459 CAR 461 (595)
Q Consensus 459 ~~~ 461 (595)
.+-
T Consensus 85 NNA 87 (247)
T 4hp8_A 85 NNA 87 (247)
T ss_dssp ECC
T ss_pred ECC
Confidence 764
No 456
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=20.89 E-value=2.1e+02 Score=26.91 Aligned_cols=71 Identities=20% Similarity=0.151 Sum_probs=35.6
Q ss_pred CCCEEEEECCCCchhHHHHhh----C--CcEEEeC-CchhHHHHHHHHHHHcCCCeeEeecCCCCCC-----CC-----C
Q 007641 389 RTRVVLDVGCGVASFGGFLFD----R--GVLTMSF-APKDEHEAQVQFALERGIPAISAVMGTERLP-----FP-----G 451 (595)
Q Consensus 389 ~~~rVLDIGCGtG~~a~~La~----r--~V~giDi-sp~di~~aqvq~A~ergi~~~~~v~d~~~LP-----fp-----d 451 (595)
.+++||=+|++ |.++..+++ + .|++++. .+...... .+.....+..+.+..+|..+.. +. -
T Consensus 20 ~~k~vlItGas-ggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAG-RGIGRGIAIELGRRGASVVVNYGSSSKAAEEV-VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEcCCchHHHHHH-HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 36789988865 445554444 3 5777776 43322211 1222233545555555543211 00 0
Q ss_pred CceeEEEecc
Q 007641 452 IVFDAVHCAR 461 (595)
Q Consensus 452 ~sFDlV~~~~ 461 (595)
+.+|+|+.+.
T Consensus 98 ~~~d~vi~~A 107 (274)
T 1ja9_A 98 GGLDFVMSNS 107 (274)
T ss_dssp SCEEEEECCC
T ss_pred CCCCEEEECC
Confidence 2589888754
No 457
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=20.84 E-value=2.9e+02 Score=26.36 Aligned_cols=30 Identities=10% Similarity=0.175 Sum_probs=20.5
Q ss_pred CCCEEEEECCCCch---hHHHHhhC--CcEEEeCC
Q 007641 389 RTRVVLDVGCGVAS---FGGFLFDR--GVLTMSFA 418 (595)
Q Consensus 389 ~~~rVLDIGCGtG~---~a~~La~r--~V~giDis 418 (595)
.+++||=.|++.|. ++..|+++ .|+.++..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence 46789999977652 44555554 67888775
No 458
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=20.67 E-value=2.2e+02 Score=26.95 Aligned_cols=32 Identities=19% Similarity=0.081 Sum_probs=21.1
Q ss_pred CCCEEEEECCC-CchhHHHHhh----C--CcEEEeCCch
Q 007641 389 RTRVVLDVGCG-VASFGGFLFD----R--GVLTMSFAPK 420 (595)
Q Consensus 389 ~~~rVLDIGCG-tG~~a~~La~----r--~V~giDisp~ 420 (595)
.+++||=.|++ .|.++..+++ + .|+.++..+.
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~ 45 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER 45 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 36789999986 2555555544 2 6788887753
No 459
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=20.59 E-value=3.2e+02 Score=27.07 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=48.6
Q ss_pred CCEEEEECCCC-c-hhHHHHhhC--CcEEEeCCchhHHHHHHHHHHHcCCCeeE----eecC---CCCCCCCCCceeEEE
Q 007641 390 TRVVLDVGCGV-A-SFGGFLFDR--GVLTMSFAPKDEHEAQVQFALERGIPAIS----AVMG---TERLPFPGIVFDAVH 458 (595)
Q Consensus 390 ~~rVLDIGCGt-G-~~a~~La~r--~V~giDisp~di~~aqvq~A~ergi~~~~----~v~d---~~~LPfpd~sFDlV~ 458 (595)
..+|+=||+|. | .++..|++. .|+.+ ..+. .++..++.|+.... .... ...+. ....+|+|+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~-----~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vi 91 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQ-----HVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLVL 91 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHH-----HHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHh-----HHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEEE
Confidence 56899999983 3 355556554 46666 4432 23333344432210 0000 01111 014589998
Q ss_pred ecccCcccccCHHHHHHHHHHhccCCcEEEEE
Q 007641 459 CARCRVPWHIEGGKLLLELNRVLRPGGFFIWS 490 (595)
Q Consensus 459 ~~~c~v~~h~d~~~lL~El~RvLKPGG~Lvis 490 (595)
.. +..+ ....++..+...|+|+..++..
T Consensus 92 la---vk~~-~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 92 FC---VKST-DTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp EC---CCGG-GHHHHHHHHTTTSCTTCEEEEE
T ss_pred EE---cccc-cHHHHHHHHHHhcCCCCEEEEe
Confidence 74 2322 4578889999999998776654
Done!